Query 043471
Match_columns 485
No_of_seqs 410 out of 5482
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 08:54:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ujc_A Phosphoethanolamine N-m 100.0 9.1E-29 3.1E-33 232.6 22.8 229 236-465 8-239 (266)
2 3hem_A Cyclopropane-fatty-acyl 99.9 6.9E-26 2.3E-30 217.0 22.7 198 270-471 59-282 (302)
3 3bus_A REBM, methyltransferase 99.9 1.8E-24 6.2E-29 204.1 24.5 201 270-470 48-254 (273)
4 1kpg_A CFA synthase;, cyclopro 99.9 2.2E-24 7.6E-29 205.0 21.3 199 270-471 51-267 (287)
5 2o57_A Putative sarcosine dime 99.9 9.7E-24 3.3E-28 201.6 22.0 167 270-436 65-238 (297)
6 3kkz_A Uncharacterized protein 99.9 5.7E-23 1.9E-27 193.1 24.9 182 266-448 28-217 (267)
7 2fk8_A Methoxy mycolic acid sy 99.9 1.1E-23 3.9E-28 203.1 18.6 199 270-471 77-293 (318)
8 3f4k_A Putative methyltransfer 99.9 5.9E-22 2E-26 185.0 23.8 167 266-433 28-197 (257)
9 3vc1_A Geranyl diphosphate 2-C 99.9 5.8E-22 2E-26 190.4 21.0 173 272-448 105-282 (312)
10 1nkv_A Hypothetical protein YJ 99.9 1.1E-21 3.7E-26 183.1 19.7 169 264-433 17-188 (256)
11 1vl5_A Unknown conserved prote 99.9 1E-21 3.5E-26 183.7 17.3 162 271-433 25-191 (260)
12 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.5E-21 5E-26 181.6 16.5 156 272-430 60-243 (261)
13 1xxl_A YCGJ protein; structura 99.9 3.5E-21 1.2E-25 177.7 17.6 164 269-433 7-175 (239)
14 1pjz_A Thiopurine S-methyltran 99.9 1.4E-21 4.6E-26 175.5 12.7 145 42-193 10-169 (203)
15 3dli_A Methyltransferase; PSI- 99.9 5.2E-22 1.8E-26 183.4 10.2 170 281-461 39-224 (240)
16 3dlc_A Putative S-adenosyl-L-m 99.9 1.3E-21 4.4E-26 177.9 12.4 160 270-431 31-202 (219)
17 3hnr_A Probable methyltransfer 99.9 4.1E-21 1.4E-25 174.9 14.1 156 272-432 34-201 (220)
18 3v97_A Ribosomal RNA large sub 99.9 2.6E-20 8.8E-25 196.0 22.0 348 36-387 172-658 (703)
19 1pjz_A Thiopurine S-methyltran 99.9 2.8E-21 9.7E-26 173.4 12.6 154 269-433 8-177 (203)
20 2gb4_A Thiopurine S-methyltran 99.9 5E-21 1.7E-25 177.1 14.2 135 52-193 66-220 (252)
21 3bkx_A SAM-dependent methyltra 99.8 5.9E-21 2E-25 180.1 14.3 196 270-468 30-257 (275)
22 1xtp_A LMAJ004091AAA; SGPP, st 99.8 5.5E-21 1.9E-25 178.1 13.7 180 11-194 51-232 (254)
23 3dh0_A SAM dependent methyltra 99.8 1.7E-20 5.8E-25 170.7 16.4 155 272-434 26-183 (219)
24 3ege_A Putative methyltransfer 99.8 2.2E-21 7.7E-26 181.5 10.8 155 270-432 21-178 (261)
25 2yqz_A Hypothetical protein TT 99.8 3.6E-21 1.2E-25 180.2 11.7 149 280-430 36-194 (263)
26 3h2b_A SAM-dependent methyltra 99.8 6.4E-21 2.2E-25 171.3 12.0 136 55-195 42-177 (203)
27 3l8d_A Methyltransferase; stru 99.8 2.2E-20 7.4E-25 172.7 15.7 149 281-432 51-200 (242)
28 3dtn_A Putative methyltransfer 99.8 5.2E-20 1.8E-24 169.2 18.2 159 272-432 32-214 (234)
29 2p35_A Trans-aconitate 2-methy 99.8 9.5E-21 3.3E-25 177.0 13.3 154 270-428 20-186 (259)
30 2p7i_A Hypothetical protein; p 99.8 2.7E-20 9.3E-25 172.7 15.8 145 282-431 41-198 (250)
31 3ccf_A Cyclopropane-fatty-acyl 99.8 3E-20 1E-24 175.6 16.2 153 273-431 47-209 (279)
32 3dtn_A Putative methyltransfer 99.8 2.7E-20 9.3E-25 171.1 14.3 152 42-196 31-210 (234)
33 3g5l_A Putative S-adenosylmeth 99.8 2.1E-20 7.3E-25 174.0 13.1 146 1-161 1-147 (253)
34 3ou2_A SAM-dependent methyltra 99.8 2.7E-20 9.1E-25 169.2 13.2 179 3-193 1-198 (218)
35 3sm3_A SAM-dependent methyltra 99.8 9E-20 3.1E-24 167.6 16.4 150 281-431 28-206 (235)
36 4htf_A S-adenosylmethionine-de 99.8 3.2E-20 1.1E-24 176.0 13.3 160 272-433 58-233 (285)
37 3hnr_A Probable methyltransfer 99.8 1.1E-20 3.7E-25 172.1 9.4 149 43-196 34-197 (220)
38 3h2b_A SAM-dependent methyltra 99.8 6.1E-20 2.1E-24 164.9 14.2 141 284-434 42-184 (203)
39 3g5l_A Putative S-adenosylmeth 99.8 2.9E-20 1E-24 173.0 12.5 158 274-433 35-217 (253)
40 3ujc_A Phosphoethanolamine N-m 99.8 5.5E-20 1.9E-24 172.5 14.4 155 38-194 39-200 (266)
41 1xtp_A LMAJ004091AAA; SGPP, st 99.8 4.7E-20 1.6E-24 171.7 13.3 157 270-432 80-238 (254)
42 3mgg_A Methyltransferase; NYSG 99.8 9.9E-20 3.4E-24 171.8 15.7 157 277-433 31-199 (276)
43 3lcc_A Putative methyl chlorid 99.8 9.5E-20 3.3E-24 167.6 14.8 153 269-434 53-209 (235)
44 3gu3_A Methyltransferase; alph 99.8 1.5E-19 5.1E-24 171.2 16.4 158 272-430 10-188 (284)
45 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.3E-20 8E-25 173.5 10.1 141 52-196 68-241 (261)
46 3l8d_A Methyltransferase; stru 99.8 4.8E-20 1.6E-24 170.4 11.6 177 10-195 13-195 (242)
47 3ou2_A SAM-dependent methyltra 99.8 1.6E-19 5.3E-24 164.0 14.4 156 272-432 34-205 (218)
48 2p7i_A Hypothetical protein; p 99.8 7.4E-20 2.5E-24 169.8 12.4 169 11-195 7-194 (250)
49 2ex4_A Adrenal gland protein A 99.8 6.8E-20 2.3E-24 169.3 11.6 181 9-194 30-219 (241)
50 1vl5_A Unknown conserved prote 99.8 7.6E-20 2.6E-24 171.0 11.7 157 34-194 17-184 (260)
51 3bkw_A MLL3908 protein, S-aden 99.8 3.1E-19 1.1E-23 165.0 15.2 158 274-434 34-216 (243)
52 3e23_A Uncharacterized protein 99.8 1.1E-19 3.9E-24 164.2 11.9 166 11-195 11-177 (211)
53 3e23_A Uncharacterized protein 99.8 2.3E-19 7.7E-24 162.2 13.8 148 270-432 32-182 (211)
54 3ocj_A Putative exported prote 99.8 2.6E-19 8.7E-24 171.4 14.9 153 280-433 115-292 (305)
55 4fsd_A Arsenic methyltransfera 99.8 3.3E-19 1.1E-23 175.9 16.0 151 281-431 81-250 (383)
56 3i9f_A Putative type 11 methyl 99.8 1.2E-19 4E-24 158.2 11.1 142 274-433 8-149 (170)
57 3cc8_A Putative methyltransfer 99.8 3E-19 1E-23 163.5 13.6 162 274-447 24-199 (230)
58 2ex4_A Adrenal gland protein A 99.8 1.5E-19 5.3E-24 166.9 11.6 144 283-432 79-225 (241)
59 3kkz_A Uncharacterized protein 99.8 1.8E-19 6.2E-24 169.1 12.3 153 37-195 28-191 (267)
60 3lcc_A Putative methyl chlorid 99.8 6.1E-19 2.1E-23 162.2 15.3 144 42-194 55-201 (235)
61 4hg2_A Methyltransferase type 99.8 1.3E-19 4.4E-24 167.9 10.5 113 38-161 25-137 (257)
62 1nkv_A Hypothetical protein YJ 99.8 1.9E-19 6.6E-24 167.8 11.8 156 35-195 17-182 (256)
63 2o57_A Putative sarcosine dime 99.8 3.4E-19 1.2E-23 170.0 13.4 149 42-194 66-228 (297)
64 3jwh_A HEN1; methyltransferase 99.8 7.2E-19 2.5E-23 159.6 14.9 159 271-429 17-189 (217)
65 3jwg_A HEN1, methyltransferase 99.8 1.3E-18 4.3E-23 158.2 15.8 158 272-429 18-189 (219)
66 3dh0_A SAM dependent methyltra 99.8 5.4E-19 1.9E-23 160.7 13.2 147 43-196 26-177 (219)
67 3dli_A Methyltransferase; PSI- 99.8 7.8E-20 2.7E-24 168.8 7.5 147 43-195 29-179 (240)
68 3g2m_A PCZA361.24; SAM-depende 99.8 3E-19 1E-23 170.4 11.3 162 269-433 69-275 (299)
69 3pfg_A N-methyltransferase; N, 99.8 4.1E-19 1.4E-23 166.3 11.9 144 282-431 49-236 (263)
70 3ccf_A Cyclopropane-fatty-acyl 99.8 8.3E-19 2.8E-23 165.7 13.9 147 40-194 43-204 (279)
71 3f4k_A Putative methyltransfer 99.8 3.4E-19 1.2E-23 166.2 11.1 155 37-196 28-192 (257)
72 3ege_A Putative methyltransfer 99.8 1.4E-19 4.8E-24 169.2 8.4 149 38-196 18-174 (261)
73 2gb4_A Thiopurine S-methyltran 99.8 2E-18 7E-23 159.6 16.0 149 272-431 56-226 (252)
74 1xxl_A YCGJ protein; structura 99.8 5.3E-19 1.8E-23 163.0 12.0 151 40-194 7-168 (239)
75 3bus_A REBM, methyltransferase 99.8 5.3E-19 1.8E-23 166.5 12.2 149 42-194 49-210 (273)
76 3e8s_A Putative SAM dependent 99.8 2.4E-19 8.1E-24 163.8 9.1 152 273-431 42-208 (227)
77 4e2x_A TCAB9; kijanose, tetron 99.8 4.9E-19 1.7E-23 177.0 12.1 303 42-385 95-409 (416)
78 2a14_A Indolethylamine N-methy 99.8 4.7E-19 1.6E-23 165.7 10.9 145 51-195 52-233 (263)
79 3ofk_A Nodulation protein S; N 99.8 8.3E-19 2.8E-23 159.1 12.2 114 45-161 42-156 (216)
80 2aot_A HMT, histamine N-methyl 99.8 3.8E-19 1.3E-23 169.1 10.3 148 281-429 50-218 (292)
81 2xvm_A Tellurite resistance pr 99.8 2.4E-18 8.3E-23 153.8 14.9 148 274-432 23-173 (199)
82 3sm3_A SAM-dependent methyltra 99.8 8E-19 2.7E-23 161.3 11.6 141 54-196 30-203 (235)
83 2p35_A Trans-aconitate 2-methy 99.8 5.1E-18 1.7E-22 158.4 17.1 146 40-193 19-183 (259)
84 3jwh_A HEN1; methyltransferase 99.8 9.6E-19 3.3E-23 158.8 11.6 152 40-193 15-185 (217)
85 3jwg_A HEN1, methyltransferase 99.8 9.7E-19 3.3E-23 159.0 11.6 152 40-193 15-185 (219)
86 1ri5_A MRNA capping enzyme; me 99.8 1E-18 3.5E-23 166.6 12.1 160 281-440 62-258 (298)
87 1y8c_A S-adenosylmethionine-de 99.8 2.2E-18 7.6E-23 159.4 14.0 147 283-431 37-224 (246)
88 3g5t_A Trans-aconitate 3-methy 99.8 2.3E-18 7.7E-23 164.4 14.5 152 272-424 25-196 (299)
89 4htf_A S-adenosylmethionine-de 99.8 1E-18 3.5E-23 165.6 12.0 146 45-194 60-226 (285)
90 2xvm_A Tellurite resistance pr 99.8 2.4E-18 8.1E-23 153.9 12.9 141 44-189 22-164 (199)
91 3e8s_A Putative SAM dependent 99.8 3E-19 1E-23 163.1 6.5 181 6-195 6-204 (227)
92 4e2x_A TCAB9; kijanose, tetron 99.8 8.5E-20 2.9E-24 182.6 3.0 160 270-433 94-254 (416)
93 3iv6_A Putative Zn-dependent a 99.8 1.7E-18 5.7E-23 159.7 11.3 116 40-160 31-149 (261)
94 1vlm_A SAM-dependent methyltra 99.8 5.3E-18 1.8E-22 154.1 14.6 133 284-432 48-188 (219)
95 2pxx_A Uncharacterized protein 99.8 3.8E-18 1.3E-22 154.5 13.4 141 11-161 4-161 (215)
96 2a14_A Indolethylamine N-methy 99.8 1.6E-18 5.3E-23 162.2 11.2 148 280-433 52-239 (263)
97 2g72_A Phenylethanolamine N-me 99.8 1.6E-18 5.4E-23 164.6 11.3 147 282-433 70-257 (289)
98 4hg2_A Methyltransferase type 99.8 1.6E-18 5.4E-23 160.6 10.9 102 283-391 39-140 (257)
99 2r3s_A Uncharacterized protein 99.8 1.4E-17 4.8E-22 161.6 17.9 162 270-433 150-324 (335)
100 3i53_A O-methyltransferase; CO 99.8 1.3E-17 4.5E-22 161.5 17.6 157 274-433 160-322 (332)
101 1kpg_A CFA synthase;, cyclopro 99.8 5.2E-18 1.8E-22 160.9 14.4 147 43-194 53-222 (287)
102 3bkw_A MLL3908 protein, S-aden 99.8 2.9E-18 1E-22 158.4 12.2 114 43-161 32-146 (243)
103 3gwz_A MMCR; methyltransferase 99.8 4.1E-17 1.4E-21 160.1 20.7 157 272-431 191-355 (369)
104 3dlc_A Putative S-adenosyl-L-m 99.8 7.1E-19 2.4E-23 159.7 7.4 151 40-195 30-198 (219)
105 3i9f_A Putative type 11 methyl 99.8 1.9E-18 6.6E-23 150.4 9.8 137 44-195 7-143 (170)
106 3vc1_A Geranyl diphosphate 2-C 99.8 4.4E-18 1.5E-22 163.3 13.1 145 45-194 107-263 (312)
107 3mq2_A 16S rRNA methyltransfer 99.8 1.4E-18 4.8E-23 157.8 9.1 172 273-451 17-204 (218)
108 2i62_A Nicotinamide N-methyltr 99.8 9.9E-19 3.4E-23 163.8 7.8 149 45-195 48-234 (265)
109 3g07_A 7SK snRNA methylphospha 99.7 8E-19 2.7E-23 166.7 6.9 146 283-431 46-268 (292)
110 1ve3_A Hypothetical protein PH 99.7 5.8E-18 2E-22 154.7 12.3 151 281-433 36-216 (227)
111 3cgg_A SAM-dependent methyltra 99.7 1.3E-17 4.6E-22 148.3 14.3 135 273-431 37-174 (195)
112 2p8j_A S-adenosylmethionine-de 99.7 1.4E-18 4.8E-23 156.7 7.9 149 281-429 21-180 (209)
113 3bxo_A N,N-dimethyltransferase 99.7 4E-18 1.4E-22 157.0 11.1 151 274-431 32-226 (239)
114 3g2m_A PCZA361.24; SAM-depende 99.7 5.1E-18 1.7E-22 161.9 12.1 120 39-162 68-193 (299)
115 2kw5_A SLR1183 protein; struct 99.7 4.5E-18 1.5E-22 152.5 11.0 151 271-433 20-172 (202)
116 2g72_A Phenylethanolamine N-me 99.7 3.4E-18 1.2E-22 162.3 10.2 143 53-195 70-251 (289)
117 2fk8_A Methoxy mycolic acid sy 99.7 1.2E-17 4E-22 160.9 14.1 149 43-196 79-250 (318)
118 2gs9_A Hypothetical protein TT 99.7 1.4E-17 4.7E-22 150.4 13.5 139 273-423 27-171 (211)
119 2kw5_A SLR1183 protein; struct 99.7 8.1E-18 2.8E-22 150.8 11.8 145 41-194 19-165 (202)
120 3ggd_A SAM-dependent methyltra 99.7 1.7E-17 5.7E-22 153.5 14.1 147 281-432 54-219 (245)
121 3hem_A Cyclopropane-fatty-acyl 99.7 8E-18 2.7E-22 160.8 12.1 146 44-194 62-237 (302)
122 2gs9_A Hypothetical protein TT 99.7 9.1E-18 3.1E-22 151.6 11.7 133 45-188 28-170 (211)
123 3cc8_A Putative methyltransfer 99.7 2.2E-17 7.4E-22 151.1 14.3 146 41-194 20-179 (230)
124 1x19_A CRTF-related protein; m 99.7 6.7E-17 2.3E-21 158.2 18.7 158 271-432 178-348 (359)
125 2i62_A Nicotinamide N-methyltr 99.7 6.7E-18 2.3E-22 158.1 11.1 148 280-433 53-240 (265)
126 2yqz_A Hypothetical protein TT 99.7 6.2E-18 2.1E-22 158.1 10.8 104 51-158 36-140 (263)
127 3dp7_A SAM-dependent methyltra 99.7 3.5E-17 1.2E-21 160.2 16.6 148 282-431 178-341 (363)
128 3gu3_A Methyltransferase; alph 99.7 4.6E-18 1.6E-22 160.9 9.8 119 38-161 5-128 (284)
129 3orh_A Guanidinoacetate N-meth 99.7 4.8E-19 1.6E-23 162.7 2.8 106 281-386 58-170 (236)
130 3thr_A Glycine N-methyltransfe 99.7 3.6E-17 1.2E-21 155.5 16.0 114 273-387 47-176 (293)
131 3mcz_A O-methyltransferase; ad 99.7 3.8E-17 1.3E-21 159.6 16.3 157 272-429 167-336 (352)
132 1qzz_A RDMB, aclacinomycin-10- 99.7 7.8E-17 2.7E-21 158.8 18.1 158 272-433 171-340 (374)
133 1ri5_A MRNA capping enzyme; me 99.7 6.2E-18 2.1E-22 161.2 9.6 108 52-161 62-176 (298)
134 2vdw_A Vaccinia virus capping 99.7 4.9E-18 1.7E-22 161.4 8.8 153 282-434 47-248 (302)
135 2p8j_A S-adenosylmethionine-de 99.7 1.1E-17 3.7E-22 150.8 10.6 141 53-195 22-178 (209)
136 3ofk_A Nodulation protein S; N 99.7 3.3E-17 1.1E-21 148.4 13.6 108 278-388 46-156 (216)
137 3lst_A CALO1 methyltransferase 99.7 4.9E-17 1.7E-21 158.4 15.6 154 272-431 173-335 (348)
138 3thr_A Glycine N-methyltransfe 99.7 4.2E-18 1.4E-22 162.1 7.7 122 38-161 41-177 (293)
139 3p2e_A 16S rRNA methylase; met 99.7 2.8E-18 9.5E-23 156.1 6.0 162 281-447 22-201 (225)
140 3dmg_A Probable ribosomal RNA 99.7 4.5E-17 1.5E-21 159.3 14.8 332 39-434 31-375 (381)
141 3pfg_A N-methyltransferase; N, 99.7 2.8E-17 9.5E-22 153.8 12.7 101 54-160 50-152 (263)
142 3d2l_A SAM-dependent methyltra 99.7 2.6E-17 8.8E-22 152.0 12.3 154 273-431 25-222 (243)
143 2ip2_A Probable phenazine-spec 99.7 1.4E-16 4.8E-21 154.4 17.9 158 271-432 156-322 (334)
144 1tw3_A COMT, carminomycin 4-O- 99.7 1.6E-16 5.4E-21 155.7 18.3 159 272-433 172-340 (360)
145 3m33_A Uncharacterized protein 99.7 3.3E-17 1.1E-21 149.6 12.4 131 269-432 35-167 (226)
146 3m70_A Tellurite resistance pr 99.7 4.5E-17 1.5E-21 154.3 13.6 139 282-431 119-259 (286)
147 3m70_A Tellurite resistance pr 99.7 2.8E-17 9.7E-22 155.7 12.1 141 44-189 110-251 (286)
148 1fbn_A MJ fibrillarin homologu 99.7 1.2E-16 4.1E-21 146.2 15.9 146 270-433 58-214 (230)
149 1wzn_A SAM-dependent methyltra 99.7 3.8E-17 1.3E-21 151.8 12.4 116 270-387 28-146 (252)
150 4df3_A Fibrillarin-like rRNA/T 99.7 2.3E-16 8E-21 142.2 16.7 149 270-432 61-217 (233)
151 3cgg_A SAM-dependent methyltra 99.7 1.2E-16 4.3E-21 141.9 14.7 131 45-194 38-169 (195)
152 3orh_A Guanidinoacetate N-meth 99.7 1.8E-18 6.2E-23 158.8 2.6 146 10-158 13-169 (236)
153 2avn_A Ubiquinone/menaquinone 99.7 3.8E-17 1.3E-21 152.6 11.7 152 272-433 44-214 (260)
154 1y8c_A S-adenosylmethionine-de 99.7 2.1E-17 7.1E-22 152.9 9.6 104 54-160 37-143 (246)
155 3mgg_A Methyltransferase; NYSG 99.7 3.5E-17 1.2E-21 154.3 11.3 149 44-196 27-194 (276)
156 3bkx_A SAM-dependent methyltra 99.7 4.5E-17 1.5E-21 153.4 11.7 154 41-196 30-215 (275)
157 4fsd_A Arsenic methyltransfera 99.7 1.7E-17 6E-22 163.5 9.0 141 52-194 81-245 (383)
158 1zx0_A Guanidinoacetate N-meth 99.7 6.5E-18 2.2E-22 155.4 5.5 108 281-388 58-172 (236)
159 3dp7_A SAM-dependent methyltra 99.7 1E-16 3.6E-21 156.9 14.0 143 53-197 178-339 (363)
160 3g07_A 7SK snRNA methylphospha 99.7 1.3E-17 4.6E-22 158.2 7.2 150 45-194 35-263 (292)
161 2qe6_A Uncharacterized protein 99.7 2.6E-16 8.9E-21 147.5 15.8 153 273-428 66-238 (274)
162 2aot_A HMT, histamine N-methyl 99.7 2.4E-17 8.4E-22 156.6 8.9 150 43-194 40-215 (292)
163 3reo_A (ISO)eugenol O-methyltr 99.7 2.9E-16 9.9E-21 153.9 16.6 153 272-433 191-356 (368)
164 3e05_A Precorrin-6Y C5,15-meth 99.7 6.5E-16 2.2E-20 138.6 17.2 133 270-425 27-161 (204)
165 3ggd_A SAM-dependent methyltra 99.7 4.6E-17 1.6E-21 150.6 9.8 110 52-162 54-166 (245)
166 3p9c_A Caffeic acid O-methyltr 99.7 4.2E-16 1.4E-20 152.4 17.0 153 272-433 189-354 (364)
167 3ocj_A Putative exported prote 99.7 1.2E-16 4E-21 152.9 12.8 140 52-194 116-285 (305)
168 3iv6_A Putative Zn-dependent a 99.7 2.7E-16 9.4E-21 144.8 14.3 111 270-387 32-149 (261)
169 3grz_A L11 mtase, ribosomal pr 99.7 1.9E-16 6.6E-21 142.2 13.1 127 281-432 58-185 (205)
170 1vlm_A SAM-dependent methyltra 99.7 1.5E-16 5E-21 144.5 12.2 127 55-194 48-182 (219)
171 3bxo_A N,N-dimethyltransferase 99.7 6.5E-17 2.2E-21 148.9 9.9 104 53-162 39-144 (239)
172 1fp1_D Isoliquiritigenin 2'-O- 99.7 2.1E-16 7.3E-21 155.3 13.9 151 272-431 197-359 (372)
173 3bgv_A MRNA CAP guanine-N7 met 99.7 5.3E-17 1.8E-21 155.9 9.3 159 282-440 33-240 (313)
174 3g5t_A Trans-aconitate 3-methy 99.7 5.9E-17 2E-21 154.5 9.5 114 39-158 22-148 (299)
175 3evz_A Methyltransferase; NYSG 99.7 9.6E-16 3.3E-20 140.2 16.9 140 273-431 45-205 (230)
176 4a6d_A Hydroxyindole O-methylt 99.7 1.6E-15 5.5E-20 147.6 19.4 159 271-432 167-334 (353)
177 3njr_A Precorrin-6Y methylase; 99.7 6.9E-16 2.3E-20 138.2 15.4 136 270-431 42-179 (204)
178 4dcm_A Ribosomal RNA large sub 99.7 9.6E-16 3.3E-20 149.8 17.6 287 46-386 29-334 (375)
179 1ve3_A Hypothetical protein PH 99.7 2.3E-16 7.8E-21 144.0 12.2 115 43-161 29-144 (227)
180 3mti_A RRNA methylase; SAM-dep 99.7 2.5E-16 8.6E-21 139.0 11.9 147 271-431 11-168 (185)
181 2vdw_A Vaccinia virus capping 99.7 4E-17 1.4E-21 155.1 6.9 109 53-161 47-171 (302)
182 3fpf_A Mtnas, putative unchara 99.7 6.9E-16 2.4E-20 143.3 14.7 109 273-387 112-223 (298)
183 3q87_B N6 adenine specific DNA 99.7 6.7E-16 2.3E-20 134.2 13.8 118 282-431 22-148 (170)
184 2zfu_A Nucleomethylin, cerebra 99.7 2.3E-16 7.9E-21 142.8 10.9 122 274-432 57-179 (215)
185 1wzn_A SAM-dependent methyltra 99.7 4.1E-16 1.4E-20 144.8 12.1 116 43-161 30-147 (252)
186 3hm2_A Precorrin-6Y C5,15-meth 99.7 9.3E-16 3.2E-20 134.3 13.5 135 271-430 13-151 (178)
187 3htx_A HEN1; HEN1, small RNA m 99.7 5.6E-16 1.9E-20 159.6 13.6 118 42-162 709-837 (950)
188 1zx0_A Guanidinoacetate N-meth 99.7 8.9E-17 3E-21 147.7 7.1 117 44-161 51-172 (236)
189 2fyt_A Protein arginine N-meth 99.7 1.2E-16 4.2E-21 154.5 8.4 139 11-157 24-169 (340)
190 1fp2_A Isoflavone O-methyltran 99.7 7.5E-16 2.6E-20 150.3 13.9 147 276-431 179-340 (352)
191 3uwp_A Histone-lysine N-methyl 99.7 2.4E-16 8.3E-21 151.5 10.0 124 268-392 158-294 (438)
192 2pxx_A Uncharacterized protein 99.6 1.3E-15 4.3E-20 137.7 13.9 116 271-388 31-161 (215)
193 1af7_A Chemotaxis receptor met 99.6 1.1E-15 3.7E-20 142.2 13.6 170 212-385 30-251 (274)
194 3htx_A HEN1; HEN1, small RNA m 99.6 5.4E-16 1.8E-20 159.8 12.2 119 270-389 708-837 (950)
195 1xdz_A Methyltransferase GIDB; 99.6 7.3E-16 2.5E-20 142.0 11.8 129 281-431 68-201 (240)
196 3e05_A Precorrin-6Y C5,15-meth 99.6 1.1E-15 3.9E-20 137.0 12.7 133 38-192 24-160 (204)
197 2r3s_A Uncharacterized protein 99.6 5.2E-16 1.8E-20 150.5 11.2 148 44-195 153-318 (335)
198 2zfu_A Nucleomethylin, cerebra 99.6 1.3E-16 4.6E-21 144.3 6.4 150 12-195 24-174 (215)
199 1dus_A MJ0882; hypothetical pr 99.6 1.9E-15 6.6E-20 134.0 13.4 117 270-388 39-159 (194)
200 2avn_A Ubiquinone/menaquinone 99.6 8.5E-16 2.9E-20 143.3 11.2 100 54-161 54-154 (260)
201 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.6E-15 8.9E-20 135.7 14.0 129 282-430 40-180 (214)
202 3mti_A RRNA methylase; SAM-dep 99.6 5.1E-16 1.7E-20 137.0 9.0 109 52-161 20-137 (185)
203 2qe6_A Uncharacterized protein 99.6 7.2E-16 2.5E-20 144.4 10.5 118 45-162 67-199 (274)
204 3lpm_A Putative methyltransfer 99.6 1.9E-15 6.6E-20 140.8 13.2 135 276-431 41-200 (259)
205 4df3_A Fibrillarin-like rRNA/T 99.6 1.8E-15 6E-20 136.4 12.4 108 48-159 71-182 (233)
206 2ld4_A Anamorsin; methyltransf 99.6 5.8E-16 2E-20 135.4 9.0 124 277-431 6-133 (176)
207 3r0q_C Probable protein argini 99.6 3E-16 1E-20 154.0 7.8 143 12-161 24-171 (376)
208 3m33_A Uncharacterized protein 99.6 3E-16 1E-20 143.2 7.2 114 53-194 47-161 (226)
209 3p9n_A Possible methyltransfer 99.6 8.7E-16 3E-20 136.0 9.8 108 282-389 43-156 (189)
210 1x19_A CRTF-related protein; m 99.6 6.2E-15 2.1E-19 144.2 16.2 149 43-196 179-344 (359)
211 3lbf_A Protein-L-isoaspartate 99.6 1.6E-15 5.4E-20 136.7 10.7 113 39-161 62-176 (210)
212 3p9n_A Possible methyltransfer 99.6 3.2E-16 1.1E-20 138.8 5.9 123 38-161 25-155 (189)
213 3bgv_A MRNA CAP guanine-N7 met 99.6 1E-15 3.6E-20 146.8 9.9 108 54-161 34-157 (313)
214 3q87_B N6 adenine specific DNA 99.6 6.6E-16 2.3E-20 134.2 7.6 127 41-194 8-143 (170)
215 1yb2_A Hypothetical protein TA 99.6 1.9E-15 6.6E-20 142.1 11.4 133 273-431 100-236 (275)
216 3njr_A Precorrin-6Y methylase; 99.6 4.5E-15 1.5E-19 132.9 13.2 130 39-192 40-172 (204)
217 2yxd_A Probable cobalt-precorr 99.6 7.6E-15 2.6E-19 128.9 14.4 134 269-430 21-155 (183)
218 3hm2_A Precorrin-6Y C5,15-meth 99.6 1E-15 3.4E-20 134.1 8.5 114 40-161 11-129 (178)
219 2nxc_A L11 mtase, ribosomal pr 99.6 2.5E-15 8.4E-20 139.4 11.5 132 274-431 112-243 (254)
220 1vbf_A 231AA long hypothetical 99.6 2.4E-15 8.3E-20 137.6 11.3 115 37-161 53-167 (231)
221 2b3t_A Protein methyltransfera 99.6 4.6E-15 1.6E-19 139.6 13.5 137 270-429 97-260 (276)
222 1zg3_A Isoflavanone 4'-O-methy 99.6 3.3E-15 1.1E-19 146.0 13.0 149 274-431 182-346 (358)
223 4hc4_A Protein arginine N-meth 99.6 4E-16 1.4E-20 151.0 5.9 143 9-158 41-188 (376)
224 2y1w_A Histone-arginine methyl 99.6 1.1E-15 3.8E-20 148.4 9.1 140 13-159 12-155 (348)
225 3lbf_A Protein-L-isoaspartate 99.6 5.1E-15 1.7E-19 133.4 12.8 113 269-388 63-176 (210)
226 3i53_A O-methyltransferase; CO 99.6 3.3E-15 1.1E-19 144.6 12.2 147 45-196 160-317 (332)
227 3mq2_A 16S rRNA methyltransfer 99.6 1E-15 3.4E-20 138.9 8.0 145 44-194 17-178 (218)
228 3q7e_A Protein arginine N-meth 99.6 8E-16 2.8E-20 149.4 7.7 139 14-158 29-172 (349)
229 3eey_A Putative rRNA methylase 99.6 2.2E-15 7.6E-20 134.3 9.8 112 278-389 17-142 (197)
230 1l3i_A Precorrin-6Y methyltran 99.6 5.2E-15 1.8E-19 131.0 12.0 134 269-427 19-155 (192)
231 2pwy_A TRNA (adenine-N(1)-)-me 99.6 5.7E-15 1.9E-19 137.5 12.8 137 270-431 83-223 (258)
232 2fca_A TRNA (guanine-N(7)-)-me 99.6 4.7E-15 1.6E-19 133.8 11.8 128 282-429 37-176 (213)
233 3d2l_A SAM-dependent methyltra 99.6 3.8E-15 1.3E-19 137.4 11.5 114 41-160 22-138 (243)
234 3mcz_A O-methyltransferase; ad 99.6 4E-15 1.4E-19 145.2 12.0 150 45-196 169-335 (352)
235 1dus_A MJ0882; hypothetical pr 99.6 3.5E-15 1.2E-19 132.4 10.6 117 41-161 39-159 (194)
236 3gwz_A MMCR; methyltransferase 99.6 8.8E-15 3E-19 143.5 14.4 149 43-196 191-352 (369)
237 3uwp_A Histone-lysine N-methyl 99.6 6.9E-16 2.4E-20 148.4 6.2 118 41-163 160-292 (438)
238 3fpf_A Mtnas, putative unchara 99.6 3.3E-15 1.1E-19 138.7 10.5 104 48-160 116-223 (298)
239 1qzz_A RDMB, aclacinomycin-10- 99.6 3.6E-15 1.2E-19 146.8 11.4 151 41-196 169-335 (374)
240 1jsx_A Glucose-inhibited divis 99.6 5.3E-15 1.8E-19 132.9 11.2 112 270-386 49-165 (207)
241 2ipx_A RRNA 2'-O-methyltransfe 99.6 6.4E-15 2.2E-19 135.0 11.8 142 277-432 71-217 (233)
242 1af7_A Chemotaxis receptor met 99.6 4.5E-15 1.5E-19 138.0 10.7 103 54-158 105-251 (274)
243 1g8a_A Fibrillarin-like PRE-rR 99.6 4E-14 1.4E-18 129.1 16.9 147 270-432 57-212 (227)
244 1nt2_A Fibrillarin-like PRE-rR 99.6 4.6E-15 1.6E-19 133.3 10.3 105 50-159 53-161 (210)
245 3id6_C Fibrillarin-like rRNA/T 99.6 3.4E-14 1.2E-18 128.4 15.9 148 270-432 60-216 (232)
246 4dzr_A Protein-(glutamine-N5) 99.6 5.5E-16 1.9E-20 140.1 4.0 140 270-430 16-190 (215)
247 1vbf_A 231AA long hypothetical 99.6 1.5E-14 5E-19 132.4 13.5 113 269-389 56-168 (231)
248 2ip2_A Probable phenazine-spec 99.6 3.4E-15 1.2E-19 144.6 9.8 148 42-195 156-317 (334)
249 3mb5_A SAM-dependent methyltra 99.6 1.1E-14 3.8E-19 135.3 12.8 136 270-431 80-221 (255)
250 3giw_A Protein of unknown func 99.6 7.5E-15 2.6E-19 134.7 11.2 143 284-428 79-243 (277)
251 1p91_A Ribosomal RNA large sub 99.6 6.4E-15 2.2E-19 138.1 10.9 97 282-389 84-181 (269)
252 1nt2_A Fibrillarin-like PRE-rR 99.6 9.3E-15 3.2E-19 131.3 11.3 134 279-432 53-195 (210)
253 2frn_A Hypothetical protein PH 99.6 3.8E-14 1.3E-18 133.2 16.0 129 281-428 123-253 (278)
254 3reo_A (ISO)eugenol O-methyltr 99.6 1.1E-14 3.7E-19 142.7 12.6 143 44-196 192-351 (368)
255 3grz_A L11 mtase, ribosomal pr 99.6 3.5E-15 1.2E-19 133.9 8.2 129 43-195 47-180 (205)
256 3dxy_A TRNA (guanine-N(7)-)-me 99.6 4.6E-15 1.6E-19 134.1 9.0 104 283-386 34-150 (218)
257 2ift_A Putative methylase HI07 99.6 3.3E-15 1.1E-19 133.6 7.5 106 283-389 53-166 (201)
258 1fbn_A MJ fibrillarin homologu 99.6 2.2E-14 7.4E-19 131.1 13.1 109 44-158 61-177 (230)
259 2h00_A Methyltransferase 10 do 99.6 4.5E-15 1.5E-19 137.9 8.6 144 283-432 65-238 (254)
260 1tw3_A COMT, carminomycin 4-O- 99.6 1.2E-14 4.3E-19 142.2 12.2 151 41-196 170-335 (360)
261 3hp7_A Hemolysin, putative; st 99.6 2.8E-14 9.7E-19 132.8 13.9 149 271-431 72-231 (291)
262 3lst_A CALO1 methyltransferase 99.6 6.5E-15 2.2E-19 143.3 10.0 145 43-195 173-331 (348)
263 3fzg_A 16S rRNA methylase; met 99.6 1.2E-15 4.1E-20 130.8 4.1 104 282-386 48-152 (200)
264 3evz_A Methyltransferase; NYSG 99.6 1.2E-14 4.2E-19 132.8 11.1 136 43-193 44-199 (230)
265 1g6q_1 HnRNP arginine N-methyl 99.6 2.2E-15 7.6E-20 145.1 6.3 137 16-158 3-144 (328)
266 3bzb_A Uncharacterized protein 99.6 2.2E-14 7.7E-19 135.0 12.9 145 272-432 68-237 (281)
267 2ift_A Putative methylase HI07 99.6 2.1E-15 7.1E-20 134.8 5.4 118 41-161 39-165 (201)
268 2fyt_A Protein arginine N-meth 99.6 1.7E-14 5.8E-19 139.5 12.1 110 274-384 55-169 (340)
269 3g89_A Ribosomal RNA small sub 99.6 9.4E-15 3.2E-19 134.8 9.8 130 281-432 78-212 (249)
270 1u2z_A Histone-lysine N-methyl 99.6 2E-14 6.7E-19 141.5 12.5 121 269-390 228-363 (433)
271 3p9c_A Caffeic acid O-methyltr 99.5 1.8E-14 6.3E-19 140.8 12.1 143 44-196 190-349 (364)
272 1o54_A SAM-dependent O-methylt 99.5 3.2E-14 1.1E-18 133.9 13.1 135 271-431 100-238 (277)
273 2ld4_A Anamorsin; methyltransf 99.5 5.8E-15 2E-19 129.1 7.4 119 48-192 6-128 (176)
274 2fca_A TRNA (guanine-N(7)-)-me 99.5 7.4E-15 2.5E-19 132.5 8.2 107 53-159 37-153 (213)
275 1yb2_A Hypothetical protein TA 99.5 9E-15 3.1E-19 137.5 9.1 127 43-194 99-231 (275)
276 3dxy_A TRNA (guanine-N(7)-)-me 99.5 4.7E-15 1.6E-19 134.0 6.6 107 54-160 34-151 (218)
277 3dmg_A Probable ribosomal RNA 99.5 1.8E-14 6E-19 140.9 11.1 106 53-160 232-341 (381)
278 1dl5_A Protein-L-isoaspartate 99.5 1.4E-14 4.7E-19 139.0 10.0 111 40-160 61-176 (317)
279 3p2e_A 16S rRNA methylase; met 99.5 6.3E-15 2.1E-19 133.9 7.0 103 53-158 23-138 (225)
280 2b25_A Hypothetical protein; s 99.5 3.8E-15 1.3E-19 144.3 5.9 155 271-433 93-282 (336)
281 3opn_A Putative hemolysin; str 99.5 3.2E-15 1.1E-19 136.2 4.7 148 270-431 23-183 (232)
282 2fpo_A Methylase YHHF; structu 99.5 1.4E-14 4.7E-19 129.6 8.8 105 283-388 54-162 (202)
283 3ckk_A TRNA (guanine-N(7)-)-me 99.5 2.9E-14 9.8E-19 130.4 11.0 106 281-386 44-168 (235)
284 3ckk_A TRNA (guanine-N(7)-)-me 99.5 2.1E-14 7.1E-19 131.3 10.1 108 52-160 44-169 (235)
285 2fhp_A Methylase, putative; al 99.5 2.4E-14 8.2E-19 126.3 10.2 121 268-389 28-157 (187)
286 3q7e_A Protein arginine N-meth 99.5 2.1E-14 7.2E-19 139.4 10.6 104 281-385 64-172 (349)
287 2yxe_A Protein-L-isoaspartate 99.5 4E-14 1.4E-18 127.9 11.8 113 270-388 64-179 (215)
288 1l3i_A Precorrin-6Y methyltran 99.5 1.3E-14 4.4E-19 128.5 8.3 134 37-192 16-152 (192)
289 3giw_A Protein of unknown func 99.5 2.1E-14 7.2E-19 131.7 9.8 149 45-195 68-242 (277)
290 3eey_A Putative rRNA methylase 99.5 1.4E-14 4.9E-19 129.0 8.5 110 51-161 19-141 (197)
291 2esr_A Methyltransferase; stru 99.5 9.9E-15 3.4E-19 127.7 7.1 118 271-389 18-141 (177)
292 3lec_A NADB-rossmann superfami 99.5 7.6E-14 2.6E-18 125.2 12.9 126 281-430 19-147 (230)
293 1dl5_A Protein-L-isoaspartate 99.5 2.9E-14 1E-18 136.8 10.8 113 270-388 62-177 (317)
294 2yxe_A Protein-L-isoaspartate 99.5 2E-14 6.8E-19 130.0 9.1 113 39-161 62-179 (215)
295 2esr_A Methyltransferase; stru 99.5 9.6E-15 3.3E-19 127.7 6.7 118 40-161 16-140 (177)
296 1yzh_A TRNA (guanine-N(7)-)-me 99.5 3.8E-14 1.3E-18 128.0 10.7 107 53-159 40-156 (214)
297 3mb5_A SAM-dependent methyltra 99.5 6.4E-14 2.2E-18 130.2 12.4 132 38-194 77-216 (255)
298 2yxd_A Probable cobalt-precorr 99.5 2.4E-14 8.3E-19 125.7 9.0 130 37-192 18-149 (183)
299 4dcm_A Ribosomal RNA large sub 99.5 2.8E-14 9.7E-19 139.4 10.4 115 43-160 211-335 (375)
300 3lpm_A Putative methyltransfer 99.5 2.9E-14 9.9E-19 132.8 10.0 113 46-158 40-175 (259)
301 2ozv_A Hypothetical protein AT 99.5 1.2E-13 4.3E-18 128.4 14.2 110 277-386 30-170 (260)
302 1xdz_A Methyltransferase GIDB; 99.5 1.3E-14 4.3E-19 133.6 7.3 121 53-194 69-196 (240)
303 2fpo_A Methylase YHHF; structu 99.5 6.6E-15 2.2E-19 131.7 5.2 120 38-161 37-162 (202)
304 3dr5_A Putative O-methyltransf 99.5 3.7E-14 1.3E-18 128.4 10.2 117 270-389 43-166 (221)
305 1ws6_A Methyltransferase; stru 99.5 3.1E-15 1.1E-19 130.0 2.6 120 39-162 24-150 (171)
306 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.6E-14 1.2E-18 130.0 9.8 109 47-159 70-182 (233)
307 3gdh_A Trimethylguanosine synt 99.5 1.5E-16 5.2E-21 146.7 -6.1 100 54-158 78-180 (241)
308 3ntv_A MW1564 protein; rossman 99.5 1E-13 3.4E-18 126.9 12.6 109 278-389 66-179 (232)
309 1g8a_A Fibrillarin-like PRE-rR 99.5 1.1E-13 3.6E-18 126.3 12.7 108 47-158 66-177 (227)
310 1ws6_A Methyltransferase; stru 99.5 8.2E-15 2.8E-19 127.3 5.0 117 270-389 26-150 (171)
311 2y1w_A Histone-arginine methyl 99.5 6.4E-14 2.2E-18 136.0 11.8 112 273-386 40-155 (348)
312 4a6d_A Hydroxyindole O-methylt 99.5 1.9E-13 6.5E-18 132.9 15.2 148 44-196 169-330 (353)
313 3r0q_C Probable protein argini 99.5 6E-14 2E-18 137.6 11.7 111 274-387 54-170 (376)
314 1fp1_D Isoliquiritigenin 2'-O- 99.5 1.7E-14 5.8E-19 141.7 7.8 142 44-195 198-355 (372)
315 3tfw_A Putative O-methyltransf 99.5 1.8E-14 6.2E-19 133.1 7.5 114 44-162 52-173 (248)
316 3kr9_A SAM-dependent methyltra 99.5 1.5E-13 5E-18 123.2 13.1 124 281-429 13-140 (225)
317 3bwc_A Spermidine synthase; SA 99.5 4.5E-14 1.5E-18 134.3 10.3 135 281-431 93-239 (304)
318 2b3t_A Protein methyltransfera 99.5 7.6E-14 2.6E-18 131.2 11.7 133 42-194 98-257 (276)
319 1i9g_A Hypothetical protein RV 99.5 6.1E-14 2.1E-18 132.2 11.0 113 270-387 86-204 (280)
320 4dzr_A Protein-(glutamine-N5) 99.5 4.7E-15 1.6E-19 133.9 3.2 134 42-194 17-186 (215)
321 4azs_A Methyltransferase WBDD; 99.5 9.1E-15 3.1E-19 151.2 5.6 110 53-162 65-176 (569)
322 3gnl_A Uncharacterized protein 99.5 1.2E-13 4.1E-18 124.9 12.2 124 281-428 19-145 (244)
323 3gdh_A Trimethylguanosine synt 99.5 1.2E-15 4.2E-20 140.6 -0.8 136 283-428 78-215 (241)
324 3id6_C Fibrillarin-like rRNA/T 99.5 8.2E-14 2.8E-18 125.9 11.1 115 41-159 60-181 (232)
325 2pjd_A Ribosomal RNA small sub 99.5 3.6E-14 1.2E-18 137.6 9.3 116 270-387 183-304 (343)
326 2nxc_A L11 mtase, ribosomal pr 99.5 2.8E-14 9.6E-19 132.3 7.7 120 52-194 118-238 (254)
327 3ntv_A MW1564 protein; rossman 99.5 2E-14 7E-19 131.5 6.7 118 39-162 56-179 (232)
328 3u81_A Catechol O-methyltransf 99.5 4.3E-14 1.5E-18 128.3 8.8 107 281-388 56-172 (221)
329 3bzb_A Uncharacterized protein 99.5 9.5E-14 3.3E-18 130.7 11.2 112 45-158 70-204 (281)
330 1g6q_1 HnRNP arginine N-methyl 99.5 9.7E-14 3.3E-18 133.6 11.4 108 277-385 32-144 (328)
331 1jg1_A PIMT;, protein-L-isoasp 99.5 6.3E-14 2.2E-18 128.5 9.6 112 39-161 76-191 (235)
332 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.6E-13 5.5E-18 127.7 12.3 133 38-194 80-218 (258)
333 1i1n_A Protein-L-isoaspartate 99.5 1.8E-13 6.2E-18 124.7 12.2 111 271-387 63-183 (226)
334 1o9g_A RRNA methyltransferase; 99.5 8.2E-14 2.8E-18 129.0 10.0 117 271-387 39-215 (250)
335 1o9g_A RRNA methyltransferase; 99.5 5.8E-14 2E-18 130.0 8.9 116 44-160 41-215 (250)
336 1ej0_A FTSJ; methyltransferase 99.5 4.1E-14 1.4E-18 123.6 7.4 107 272-388 10-138 (180)
337 1jg1_A PIMT;, protein-L-isoasp 99.5 1.1E-13 3.8E-18 126.9 10.5 112 270-388 78-191 (235)
338 1u2z_A Histone-lysine N-methyl 99.5 3.2E-14 1.1E-18 140.0 7.3 118 40-160 228-360 (433)
339 2yvl_A TRMI protein, hypotheti 99.5 4.3E-13 1.5E-17 124.0 14.3 112 270-387 78-191 (248)
340 2pjd_A Ribosomal RNA small sub 99.5 5E-14 1.7E-18 136.6 8.2 115 42-160 184-304 (343)
341 1p91_A Ribosomal RNA large sub 99.5 1.6E-13 5.3E-18 128.6 11.4 96 53-162 84-181 (269)
342 1jsx_A Glucose-inhibited divis 99.5 9.9E-14 3.4E-18 124.5 9.6 109 42-159 50-165 (207)
343 1ixk_A Methyltransferase; open 99.5 2.1E-13 7.1E-18 130.4 12.4 139 275-430 110-273 (315)
344 1fp2_A Isoflavone O-methyltran 99.5 9.3E-14 3.2E-18 135.4 10.0 134 52-195 186-336 (352)
345 3tfw_A Putative O-methyltransf 99.5 1.3E-13 4.3E-18 127.5 10.3 114 273-389 52-173 (248)
346 2fhp_A Methylase, putative; al 99.5 2.2E-14 7.5E-19 126.6 4.8 124 36-162 25-157 (187)
347 3g89_A Ribosomal RNA small sub 99.5 7.5E-14 2.6E-18 128.8 8.5 103 51-159 77-184 (249)
348 3b3j_A Histone-arginine methyl 99.5 4.7E-14 1.6E-18 142.0 7.7 112 43-158 147-262 (480)
349 1i1n_A Protein-L-isoaspartate 99.5 1.6E-13 5.5E-18 125.0 10.5 110 42-161 63-184 (226)
350 2gpy_A O-methyltransferase; st 99.5 2.1E-13 7.2E-18 124.8 11.2 113 273-388 44-162 (233)
351 2pbf_A Protein-L-isoaspartate 99.5 1.4E-13 5E-18 125.4 10.1 111 271-387 66-194 (227)
352 2ozv_A Hypothetical protein AT 99.5 1.5E-13 5.1E-18 127.9 10.3 114 46-159 28-170 (260)
353 3u81_A Catechol O-methyltransf 99.5 3.3E-14 1.1E-18 129.1 5.7 119 39-161 43-172 (221)
354 2frn_A Hypothetical protein PH 99.5 2.3E-13 7.7E-18 127.9 11.5 133 41-193 114-250 (278)
355 3fzg_A 16S rRNA methylase; met 99.5 1.1E-14 3.8E-19 124.9 2.3 105 45-158 42-151 (200)
356 3sso_A Methyltransferase; macr 99.5 1.1E-13 3.7E-18 132.9 9.3 109 41-162 204-327 (419)
357 1r18_A Protein-L-isoaspartate( 99.5 1.5E-13 5E-18 125.4 9.8 111 270-387 69-195 (227)
358 3dr5_A Putative O-methyltransf 99.5 3.1E-14 1E-18 128.9 5.0 109 49-162 51-166 (221)
359 1i9g_A Hypothetical protein RV 99.5 1.4E-13 4.7E-18 129.8 9.6 114 39-161 84-205 (280)
360 3c3p_A Methyltransferase; NP_9 99.5 2.3E-13 7.8E-18 122.5 10.5 103 282-388 55-162 (210)
361 2gpy_A O-methyltransferase; st 99.4 1.2E-13 4.2E-18 126.4 8.6 118 38-161 38-162 (233)
362 3hp7_A Hemolysin, putative; st 99.4 9.3E-14 3.2E-18 129.4 7.8 142 44-193 74-225 (291)
363 2bm8_A Cephalosporin hydroxyla 99.4 2.8E-14 9.6E-19 130.6 3.7 109 44-160 71-188 (236)
364 2plw_A Ribosomal RNA methyltra 99.4 4.4E-13 1.5E-17 119.7 10.8 107 271-387 9-155 (201)
365 2bm8_A Cephalosporin hydroxyla 99.4 1.1E-13 3.8E-18 126.6 6.9 122 283-427 81-214 (236)
366 1ej0_A FTSJ; methyltransferase 99.4 9.5E-14 3.3E-18 121.2 6.1 106 45-161 12-138 (180)
367 3b3j_A Histone-arginine methyl 99.4 2.9E-13 1E-17 136.2 10.4 112 272-385 147-262 (480)
368 2pbf_A Protein-L-isoaspartate 99.4 1.5E-13 5E-18 125.3 7.5 108 43-160 67-194 (227)
369 4azs_A Methyltransferase WBDD; 99.4 6.4E-14 2.2E-18 144.9 5.5 107 282-389 65-176 (569)
370 3tma_A Methyltransferase; thum 99.4 4.2E-13 1.4E-17 130.8 10.7 123 36-160 185-318 (354)
371 3sso_A Methyltransferase; macr 99.4 9.2E-14 3.1E-18 133.4 5.9 109 270-388 204-326 (419)
372 3duw_A OMT, O-methyltransferas 99.4 2.8E-13 9.5E-18 123.1 8.8 107 280-389 55-170 (223)
373 1o54_A SAM-dependent O-methylt 99.4 3E-13 1E-17 127.2 9.2 129 40-193 98-232 (277)
374 3tr6_A O-methyltransferase; ce 99.4 6.3E-14 2.2E-18 127.6 4.4 106 51-162 61-177 (225)
375 3c3p_A Methyltransferase; NP_9 99.4 1.5E-13 5.1E-18 123.7 6.8 103 53-162 55-163 (210)
376 3r3h_A O-methyltransferase, SA 99.4 3.2E-14 1.1E-18 130.8 2.4 107 51-163 57-174 (242)
377 3lec_A NADB-rossmann superfami 99.4 1.6E-12 5.3E-17 116.7 13.3 119 54-195 21-144 (230)
378 3duw_A OMT, O-methyltransferas 99.4 5.9E-14 2E-18 127.6 4.1 114 44-162 47-170 (223)
379 2vdv_E TRNA (guanine-N(7)-)-me 99.4 6.8E-13 2.3E-17 122.5 11.2 106 281-386 47-173 (246)
380 2vdv_E TRNA (guanine-N(7)-)-me 99.4 4.6E-13 1.6E-17 123.6 10.0 106 53-158 48-172 (246)
381 2b25_A Hypothetical protein; s 99.4 5.6E-13 1.9E-17 129.0 10.7 114 41-161 92-221 (336)
382 2plw_A Ribosomal RNA methyltra 99.4 5E-13 1.7E-17 119.3 9.5 106 46-160 13-155 (201)
383 3tma_A Methyltransferase; thum 99.4 1.3E-12 4.4E-17 127.3 13.2 118 270-387 190-318 (354)
384 1r18_A Protein-L-isoaspartate( 99.4 3.1E-13 1.1E-17 123.1 8.2 110 41-160 69-195 (227)
385 2igt_A SAM dependent methyltra 99.4 5.4E-13 1.8E-17 128.1 10.2 107 281-388 151-274 (332)
386 2yvl_A TRMI protein, hypotheti 99.4 1.1E-12 3.7E-17 121.2 11.5 113 40-161 77-192 (248)
387 3adn_A Spermidine synthase; am 99.4 4.3E-13 1.5E-17 126.3 8.7 107 53-160 82-199 (294)
388 1zg3_A Isoflavanone 4'-O-methy 99.4 2.2E-13 7.5E-18 133.1 6.8 140 45-194 182-341 (358)
389 3bwc_A Spermidine synthase; SA 99.4 3.6E-13 1.2E-17 128.0 8.1 131 52-193 93-233 (304)
390 3ajd_A Putative methyltransfer 99.4 8.6E-13 2.9E-17 123.7 10.5 113 277-389 77-214 (274)
391 1ixk_A Methyltransferase; open 99.4 6.1E-13 2.1E-17 127.1 9.1 136 45-194 109-269 (315)
392 1ne2_A Hypothetical protein TA 99.4 3.3E-12 1.1E-16 113.9 13.3 95 280-385 48-145 (200)
393 1ne2_A Hypothetical protein TA 99.4 1.3E-12 4.4E-17 116.6 10.6 97 51-157 48-145 (200)
394 1zq9_A Probable dimethyladenos 99.4 9.9E-13 3.4E-17 123.8 10.2 114 38-156 12-144 (285)
395 3k6r_A Putative transferase PH 99.4 8.1E-12 2.8E-16 115.9 15.9 130 281-429 123-254 (278)
396 3r3h_A O-methyltransferase, SA 99.4 8.8E-14 3E-18 127.8 2.6 107 281-390 58-174 (242)
397 3tr6_A O-methyltransferase; ce 99.4 4.8E-13 1.6E-17 121.7 7.4 106 281-389 62-177 (225)
398 2igt_A SAM dependent methyltra 99.4 3.5E-13 1.2E-17 129.4 6.7 117 45-161 143-274 (332)
399 3a27_A TYW2, uncharacterized p 99.4 1.8E-12 6.2E-17 121.2 11.4 105 280-389 116-222 (272)
400 1nv8_A HEMK protein; class I a 99.4 1.7E-12 5.9E-17 122.0 11.3 114 270-385 110-248 (284)
401 3tm4_A TRNA (guanine N2-)-meth 99.4 3.3E-12 1.1E-16 125.1 13.7 135 270-430 205-350 (373)
402 2wa2_A Non-structural protein 99.4 1.8E-13 6.2E-18 127.6 4.3 112 271-388 70-195 (276)
403 2oxt_A Nucleoside-2'-O-methylt 99.4 2.7E-13 9.2E-18 125.8 5.3 113 270-388 61-187 (265)
404 4hc4_A Protein arginine N-meth 99.4 1.9E-12 6.4E-17 125.3 11.3 102 282-385 82-188 (376)
405 1wy7_A Hypothetical protein PH 99.4 1.4E-11 4.7E-16 110.4 16.3 128 279-431 45-174 (207)
406 3opn_A Putative hemolysin; str 99.4 1.7E-13 5.6E-18 124.8 3.4 141 42-194 24-178 (232)
407 1zq9_A Probable dimethyladenos 99.4 1.9E-12 6.4E-17 121.9 10.8 112 269-383 14-144 (285)
408 3cbg_A O-methyltransferase; cy 99.4 2.1E-12 7E-17 118.0 10.6 105 282-389 71-185 (232)
409 2yxl_A PH0851 protein, 450AA l 99.4 5.5E-12 1.9E-16 126.6 14.7 115 275-389 251-392 (450)
410 3gnl_A Uncharacterized protein 99.4 3.8E-12 1.3E-16 115.1 12.1 118 54-194 21-143 (244)
411 1sui_A Caffeoyl-COA O-methyltr 99.4 8.5E-13 2.9E-17 121.6 7.8 104 282-388 78-192 (247)
412 3a27_A TYW2, uncharacterized p 99.4 1.2E-12 4.1E-17 122.5 8.9 102 52-162 117-222 (272)
413 1sui_A Caffeoyl-COA O-methyltr 99.4 3E-13 1E-17 124.7 4.7 105 51-161 76-192 (247)
414 2hnk_A SAM-dependent O-methylt 99.4 5E-13 1.7E-17 122.8 6.1 119 39-162 45-184 (239)
415 3adn_A Spermidine synthase; am 99.4 1.9E-12 6.6E-17 121.9 10.2 105 282-386 82-198 (294)
416 2wa2_A Non-structural protein 99.4 2.8E-13 9.5E-18 126.4 4.4 110 44-160 72-194 (276)
417 3kr9_A SAM-dependent methyltra 99.4 5.3E-12 1.8E-16 113.1 12.4 119 54-196 15-139 (225)
418 1wy7_A Hypothetical protein PH 99.3 5.7E-12 2E-16 112.9 12.3 112 39-157 31-147 (207)
419 3cbg_A O-methyltransferase; cy 99.3 6E-13 2E-17 121.6 5.9 106 52-162 70-185 (232)
420 1xj5_A Spermidine synthase 1; 99.3 8.5E-13 2.9E-17 126.5 7.2 108 52-159 118-235 (334)
421 2qm3_A Predicted methyltransfe 99.3 8.7E-12 3E-16 122.1 14.5 129 281-430 170-307 (373)
422 3gjy_A Spermidine synthase; AP 99.3 1.1E-12 3.6E-17 123.6 7.6 106 55-160 90-201 (317)
423 2hnk_A SAM-dependent O-methylt 99.3 1.3E-12 4.3E-17 120.1 8.0 106 280-388 57-183 (239)
424 1sqg_A SUN protein, FMU protei 99.3 5.1E-12 1.8E-16 126.1 12.6 117 273-389 236-377 (429)
425 3ajd_A Putative methyltransfer 99.3 1.3E-12 4.5E-17 122.4 7.8 120 44-163 73-215 (274)
426 2oxt_A Nucleoside-2'-O-methylt 99.3 4E-13 1.4E-17 124.6 4.1 110 44-160 64-186 (265)
427 1xj5_A Spermidine synthase 1; 99.3 2.6E-12 9E-17 123.1 9.7 105 281-385 118-234 (334)
428 2avd_A Catechol-O-methyltransf 99.3 4.6E-13 1.6E-17 122.2 4.3 107 51-162 66-182 (229)
429 2nyu_A Putative ribosomal RNA 99.3 3.8E-12 1.3E-16 113.0 10.0 106 273-388 11-147 (196)
430 3dou_A Ribosomal RNA large sub 99.3 4.2E-12 1.4E-16 112.0 10.1 106 271-387 12-140 (191)
431 3tm4_A TRNA (guanine N2-)-meth 99.3 5.8E-12 2E-16 123.3 12.1 134 38-194 202-346 (373)
432 2i7c_A Spermidine synthase; tr 99.3 1.7E-12 5.8E-17 122.1 7.9 109 51-160 75-193 (283)
433 2o07_A Spermidine synthase; st 99.3 9.9E-13 3.4E-17 124.7 6.3 109 52-161 93-211 (304)
434 2pt6_A Spermidine synthase; tr 99.3 1.5E-12 5.2E-17 124.4 7.5 107 53-160 115-231 (321)
435 3dou_A Ribosomal RNA large sub 99.3 2.1E-12 7.1E-17 114.0 7.7 107 45-160 15-140 (191)
436 1uir_A Polyamine aminopropyltr 99.3 1E-12 3.4E-17 125.5 5.7 106 53-159 76-195 (314)
437 3c3y_A Pfomt, O-methyltransfer 99.3 1.4E-12 4.9E-17 119.4 6.6 105 51-161 67-183 (237)
438 1qam_A ERMC' methyltransferase 99.3 9.5E-12 3.3E-16 114.3 11.8 94 38-135 14-108 (244)
439 2h1r_A Dimethyladenosine trans 99.3 4.7E-12 1.6E-16 119.9 9.9 100 38-142 26-127 (299)
440 3lcv_B Sisomicin-gentamicin re 99.3 1.8E-11 6.3E-16 109.9 12.9 137 282-430 131-270 (281)
441 2avd_A Catechol-O-methyltransf 99.3 2.6E-12 9E-17 117.1 7.7 105 281-388 67-181 (229)
442 1nv8_A HEMK protein; class I a 99.3 1.3E-12 4.6E-17 122.7 5.9 110 44-158 113-248 (284)
443 2b2c_A Spermidine synthase; be 99.3 1.7E-12 5.7E-17 123.4 6.4 106 53-159 107-222 (314)
444 1yub_A Ermam, rRNA methyltrans 99.3 1.9E-13 6.5E-18 126.0 -0.1 118 38-159 13-145 (245)
445 3gjy_A Spermidine synthase; AP 99.3 5.4E-12 1.9E-16 118.8 9.8 103 285-387 91-201 (317)
446 2h00_A Methyltransferase 10 do 99.3 3E-12 1E-16 118.7 7.8 114 45-158 54-191 (254)
447 2frx_A Hypothetical protein YE 99.3 1.2E-11 4.1E-16 124.3 12.6 117 277-393 109-253 (479)
448 2i7c_A Spermidine synthase; tr 99.3 5.9E-12 2E-16 118.3 9.7 107 280-386 75-192 (283)
449 3gru_A Dimethyladenosine trans 99.3 4.1E-12 1.4E-16 119.1 8.5 104 36-142 32-135 (295)
450 2b2c_A Spermidine synthase; be 99.3 3.6E-12 1.2E-16 121.1 8.2 104 282-386 107-222 (314)
451 2o07_A Spermidine synthase; st 99.3 5.9E-12 2E-16 119.3 9.0 107 281-387 93-210 (304)
452 2cmg_A Spermidine synthase; tr 99.3 7.6E-12 2.6E-16 115.9 9.4 96 282-386 71-171 (262)
453 1uir_A Polyamine aminopropyltr 99.3 4.7E-12 1.6E-16 120.8 8.2 105 282-386 76-195 (314)
454 2yxl_A PH0851 protein, 450AA l 99.3 9.3E-12 3.2E-16 124.9 10.8 120 44-163 249-393 (450)
455 1mjf_A Spermidine synthase; sp 99.3 3.1E-12 1.1E-16 120.2 6.8 106 53-160 74-194 (281)
456 1inl_A Spermidine synthase; be 99.3 3.1E-12 1.1E-16 121.0 6.7 106 53-159 89-205 (296)
457 2nyu_A Putative ribosomal RNA 99.3 3.4E-12 1.2E-16 113.3 6.5 100 52-160 20-146 (196)
458 3c3y_A Pfomt, O-methyltransfer 99.3 5.4E-12 1.8E-16 115.6 8.0 104 282-388 69-183 (237)
459 1iy9_A Spermidine synthase; ro 99.3 3.4E-12 1.2E-16 119.4 6.6 106 53-159 74-189 (275)
460 1iy9_A Spermidine synthase; ro 99.3 1E-11 3.5E-16 116.2 9.8 104 283-386 75-189 (275)
461 3m6w_A RRNA methylase; rRNA me 99.3 4.4E-12 1.5E-16 126.0 7.7 115 276-390 94-233 (464)
462 3k6r_A Putative transferase PH 99.3 2.3E-11 7.7E-16 112.9 11.9 133 40-192 113-249 (278)
463 2p41_A Type II methyltransfera 99.3 6E-12 2.1E-16 119.2 8.1 111 271-387 70-192 (305)
464 2p41_A Type II methyltransfera 99.3 1.9E-12 6.4E-17 122.7 4.4 110 46-160 74-192 (305)
465 2pt6_A Spermidine synthase; tr 99.3 6.9E-12 2.4E-16 119.8 8.3 105 282-386 115-230 (321)
466 2b78_A Hypothetical protein SM 99.3 4.2E-12 1.4E-16 124.7 6.8 121 40-161 199-333 (385)
467 2f8l_A Hypothetical protein LM 99.3 1.2E-11 4.2E-16 119.8 9.6 115 273-388 119-258 (344)
468 4dmg_A Putative uncharacterize 99.2 8.5E-12 2.9E-16 122.2 8.2 118 42-162 203-329 (393)
469 1inl_A Spermidine synthase; be 99.2 1.1E-11 3.6E-16 117.3 8.6 104 283-386 90-205 (296)
470 1sqg_A SUN protein, FMU protei 99.2 1.4E-11 4.8E-16 123.0 9.8 126 38-163 230-378 (429)
471 1qam_A ERMC' methyltransferase 99.2 5.8E-12 2E-16 115.7 6.2 112 269-383 16-143 (244)
472 3frh_A 16S rRNA methylase; met 99.2 2.8E-11 9.6E-16 107.7 10.1 100 282-385 104-205 (253)
473 4dmg_A Putative uncharacterize 99.2 2.2E-11 7.6E-16 119.2 10.2 114 273-388 205-328 (393)
474 1mjf_A Spermidine synthase; sp 99.2 1E-11 3.4E-16 116.7 7.4 103 282-386 74-193 (281)
475 1yub_A Ermam, rRNA methyltrans 99.2 1.4E-13 4.9E-18 126.8 -5.2 114 270-386 16-145 (245)
476 3frh_A 16S rRNA methylase; met 99.2 1.3E-11 4.6E-16 109.8 7.5 100 53-157 104-204 (253)
477 2xyq_A Putative 2'-O-methyl tr 99.2 3E-11 1E-15 112.8 10.2 117 279-430 59-195 (290)
478 2cmg_A Spermidine synthase; tr 99.2 1.3E-11 4.4E-16 114.3 7.4 96 52-159 70-171 (262)
479 1uwv_A 23S rRNA (uracil-5-)-me 99.2 1.2E-10 4.2E-15 116.2 15.0 134 271-430 274-412 (433)
480 1wxx_A TT1595, hypothetical pr 99.2 8.9E-12 3.1E-16 122.5 6.6 115 44-161 202-327 (382)
481 2b78_A Hypothetical protein SM 99.2 1.2E-11 4.2E-16 121.4 7.6 142 273-430 203-360 (385)
482 2as0_A Hypothetical protein PH 99.2 1.5E-11 5.3E-16 121.5 8.2 118 43-161 207-337 (396)
483 3b5i_A S-adenosyl-L-methionine 99.2 7.2E-10 2.5E-14 106.9 19.6 163 270-432 34-298 (374)
484 3lcv_B Sisomicin-gentamicin re 99.2 9.1E-12 3.1E-16 111.8 5.8 106 46-157 126-234 (281)
485 2h1r_A Dimethyladenosine trans 99.2 4.7E-11 1.6E-15 113.1 11.0 88 270-360 29-117 (299)
486 3c0k_A UPF0064 protein YCCW; P 99.2 2.6E-11 8.8E-16 119.9 9.5 107 282-388 219-341 (396)
487 2frx_A Hypothetical protein YE 99.2 2.9E-11 1E-15 121.4 9.9 114 48-163 109-250 (479)
488 3fut_A Dimethyladenosine trans 99.2 4.6E-11 1.6E-15 110.7 10.5 102 38-144 31-133 (271)
489 3tqs_A Ribosomal RNA small sub 99.2 3.3E-11 1.1E-15 110.8 9.1 97 38-136 13-111 (255)
490 3c0k_A UPF0064 protein YCCW; P 99.2 3.2E-11 1.1E-15 119.2 8.8 107 53-161 219-341 (396)
491 3m6w_A RRNA methylase; rRNA me 99.2 1.1E-11 3.7E-16 123.3 5.0 123 39-163 86-233 (464)
492 3m4x_A NOL1/NOP2/SUN family pr 99.2 1.9E-11 6.4E-16 121.4 6.6 115 276-390 98-238 (456)
493 3gru_A Dimethyladenosine trans 99.2 9.1E-11 3.1E-15 110.0 10.7 90 269-360 36-125 (295)
494 2qm3_A Predicted methyltransfe 99.2 6.2E-11 2.1E-15 116.1 9.9 102 52-158 170-277 (373)
495 2yx1_A Hypothetical protein MJ 99.2 1.3E-10 4.6E-15 111.9 12.0 99 282-389 194-294 (336)
496 3v97_A Ribosomal RNA large sub 99.2 1.9E-11 6.6E-16 128.6 6.1 107 54-161 539-659 (703)
497 2as0_A Hypothetical protein PH 99.2 3E-11 1E-15 119.4 7.1 115 273-388 208-337 (396)
498 1wxx_A TT1595, hypothetical pr 99.2 2E-11 6.9E-16 120.0 5.5 105 283-388 209-327 (382)
499 3m4x_A NOL1/NOP2/SUN family pr 99.1 2.5E-11 8.4E-16 120.6 6.0 126 37-163 88-238 (456)
500 2yx1_A Hypothetical protein MJ 99.1 1.4E-10 4.7E-15 111.8 10.0 97 53-161 194-293 (336)
No 1
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.96 E-value=9.1e-29 Score=232.57 Aligned_cols=229 Identities=40% Similarity=0.746 Sum_probs=204.9
Q ss_pred hhHHHhhhhhhccccchhHHHHHhccccccCCchHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCC
Q 043471 236 RGFQQFLDNVQYKLNGILRYERVFGVGFVSTGGIETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLS 315 (485)
Q Consensus 236 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s 315 (485)
+.|+.|++...|...++..|+..++..+..+.....+..+++.+.+.++.+|||||||+|.++..+++.++.+|+|+|+|
T Consensus 8 ~~f~~~l~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s 87 (266)
T 3ujc_A 8 NSDKTFLENNQYTDEGVKVYEFIFGENYISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDIC 87 (266)
T ss_dssp -CHHHHHHHTTTSHHHHHHHHHHHCTTCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESC
T ss_pred hhHHHHHhccccchhhHHHHHHHhCCCccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCC
Confidence 45888998888888889999999999999999999999999999999999999999999999999999777899999999
Q ss_pred HHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccccccc--CCHHHHHHHHHhcCCCCcEEEEEecccCC-C
Q 043471 316 INMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTILHI--QDKPALFKSFFKWLKPGGTVLISDYCKSF-G 392 (485)
Q Consensus 316 ~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-~ 392 (485)
+.+++.|+++.... .++++.++|+.++++++++||+|++..+++|+ +++..++++++++|||||++++.++.... .
T Consensus 88 ~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 166 (266)
T 3ujc_A 88 SNIVNMANERVSGN-NKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE 166 (266)
T ss_dssp HHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG
T ss_pred HHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc
Confidence 99999999987654 68999999999999888999999999999999 79999999999999999999999876654 2
Q ss_pred CCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeecchHHHHHHHHHHHHHHhcHHHHHHHhhhhhhhh
Q 043471 393 TPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDRTEQFVQVLQRELDAIEKDKDAFIKDFSEVFCFF 465 (485)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (485)
.....+..+..+.+..+++.+++.++++++||+++.+...+.++..++..|.+.+...++++...++++..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (266)
T 3ujc_A 167 NWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKLFSEKKFIS 239 (266)
T ss_dssp GCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHHSCHHHHHH
T ss_pred cchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeCCHHHHHHHHHHHHHHHhCHHHHHHhcCHHHHHH
Confidence 3344556666667777889999999999999999999999999999999999999999999988887776665
No 2
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.94 E-value=6.9e-26 Score=216.98 Aligned_cols=198 Identities=22% Similarity=0.272 Sum_probs=168.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~~ 347 (485)
..+..+++.+.++++.+|||||||+|.++..+++.++.+|+|+|+|+.+++.|+++... +..++++..+|+.++ +
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~ 135 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---D 135 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---C
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---C
Confidence 35667888888999999999999999999999998778999999999999999998764 445799999999876 6
Q ss_pred CCccEEEEcccccccCCH---------HHHHHHHHhcCCCCcEEEEEecccCCCCCC---------------hhHHHHHH
Q 043471 348 NSFDVIYSRDTILHIQDK---------PALFKSFFKWLKPGGTVLISDYCKSFGTPS---------------VEFSEYIK 403 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---------------~~~~~~~~ 403 (485)
++||+|++..+++|++++ ..+++++.++|||||++++.++........ .....++.
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIF 215 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTC
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcC
Confidence 899999999999999765 799999999999999999998765432100 11222333
Q ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeecchHHHHHHHHHHHHHHhcHHHHHHHhhhhhhhhhhhhcc
Q 043471 404 QRGYDLHDVKSYGQMLKDAGFVDIIAEDRTEQFVQVLQRELDAIEKDKDAFIKDFSEVFCFFHLDCLS 471 (485)
Q Consensus 404 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (485)
+.+ .+++.+++.++++++||+++.++..+.+|..++..|.++++.+++++.+.+++++.++|...|.
T Consensus 216 p~~-~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~~w~~yl~ 282 (302)
T 3hem_A 216 PGG-RLPRISQVDYYSSNAGWKVERYHRIGANYVPTLNAWADALQAHKDEAIALKGQETCDIYMHYLR 282 (302)
T ss_dssp TTC-CCCCHHHHHHHHHHHTCEEEEEEECGGGHHHHHHHHHHHHHHTHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCC-CCCCHHHHHHHHHhCCcEEEEEEeCchhHHHHHHHHHHHHHHhHHHHHHHhCHHHHHHHHHHHH
Confidence 332 5678999999999999999999999999999999999999999999999999999999887664
No 3
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.93 E-value=1.8e-24 Score=204.06 Aligned_cols=201 Identities=26% Similarity=0.395 Sum_probs=167.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~ 347 (485)
.....+++.+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|+++.. ++..++++..+|+.++|+++
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 4567788888888999999999999999999998778899999999999999999876 34457999999999999888
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCCh---hHHHHHH-hcCCCCCCHHHHHHHHHhCC
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSV---EFSEYIK-QRGYDLHDVKSYGQMLKDAG 423 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~l~~aG 423 (485)
++||+|++..+++|++++..+++++.++|||||++++.++......... .+..+.. ..+...++.+++.++++++|
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 207 (273)
T 3bus_A 128 ASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAE 207 (273)
T ss_dssp TCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTT
T ss_pred CCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999987654432221 1122211 12346789999999999999
Q ss_pred CeEEEEeecchHHHHHHHHHHHHHHhcHHHHHHHhhhhhhhhhhhhc
Q 043471 424 FVDIIAEDRTEQFVQVLQRELDAIEKDKDAFIKDFSEVFCFFHLDCL 470 (485)
Q Consensus 424 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (485)
|+++.++..+.++..++..|.+++...+..+...++++..+.+...+
T Consensus 208 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (273)
T 3bus_A 208 LVVTSTVDISAQARPSLVKTAEAFENARSQVEPFMGAEGLDRMIATF 254 (273)
T ss_dssp CEEEEEEECHHHHTTHHHHHHHHHHHTHHHHHHHHCHHHHHHHHHHH
T ss_pred CeEEEEEECcHhHHHHHHHHHHHHHHhHHHHHhhcCHHHHHHHHHHH
Confidence 99999999999999999999999988877777777776555544433
No 4
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.93 E-value=2.2e-24 Score=204.99 Aligned_cols=199 Identities=23% Similarity=0.288 Sum_probs=164.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~~ 347 (485)
.....+++.+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|++++.. ...++++..+|+.+++
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---
Confidence 35567778888889999999999999999999976688999999999999999998864 3358999999998765
Q ss_pred CCccEEEEccccccc--CCHHHHHHHHHhcCCCCcEEEEEecccCCCC-------CCh----hHHHHHHh---cCCCCCC
Q 043471 348 NSFDVIYSRDTILHI--QDKPALFKSFFKWLKPGGTVLISDYCKSFGT-------PSV----EFSEYIKQ---RGYDLHD 411 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-------~~~----~~~~~~~~---~~~~~~~ 411 (485)
++||+|++..+++|+ +++..+++++.++|||||++++.++...... +.. .+..++.. .+..+++
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 207 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPS 207 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCC
Confidence 789999999999999 6899999999999999999999987653211 100 11111111 1235679
Q ss_pred HHHHHHHHHhCCCeEEEEeecchHHHHHHHHHHHHHHhcHHHHHHHhhhhhhhhhhhhcc
Q 043471 412 VKSYGQMLKDAGFVDIIAEDRTEQFVQVLQRELDAIEKDKDAFIKDFSEVFCFFHLDCLS 471 (485)
Q Consensus 412 ~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (485)
.+++.++++++||+++.+...+.+|..++..|.+++...++++.+.++++..+.|...|.
T Consensus 208 ~~~~~~~l~~aGf~~~~~~~~~~~y~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 267 (287)
T 1kpg_A 208 IPMVQECASANGFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIALQSEEVYERYMKYLT 267 (287)
T ss_dssp HHHHHHHHHTTTCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEEEEeCcHhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988887777665543
No 5
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.92 E-value=9.7e-24 Score=201.57 Aligned_cols=167 Identities=25% Similarity=0.379 Sum_probs=140.1
Q ss_pred HHHHHHHHHc----CCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCC
Q 043471 270 ETTKEFVAKL----DLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKK 343 (485)
Q Consensus 270 ~~~~~~~~~~----~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~ 343 (485)
.....+++.+ .+.++.+|||||||+|.++..+++.++.+|+|+|+|+.+++.|+++.. +...++++..+|+.++
T Consensus 65 ~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 65 RTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 4567788888 788899999999999999999998877899999999999999998874 4456899999999999
Q ss_pred CCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcC-CCCCCHHHHHHHHHhC
Q 043471 344 TYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRG-YDLHDVKSYGQMLKDA 422 (485)
Q Consensus 344 ~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a 422 (485)
|+++++||+|++..+++|++++..++++++++|||||++++.++..........+........ ..+.+...+.++|+++
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 224 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKEC 224 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHT
T ss_pred CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHC
Confidence 998899999999999999999999999999999999999999876654443333333333222 2456899999999999
Q ss_pred CCeEEEEeecchHH
Q 043471 423 GFVDIIAEDRTEQF 436 (485)
Q Consensus 423 Gf~~~~~~~~~~~~ 436 (485)
||+++.+...+...
T Consensus 225 Gf~~~~~~~~~~~~ 238 (297)
T 2o57_A 225 GLVTLRTFSRPDSL 238 (297)
T ss_dssp TEEEEEEEECHHHH
T ss_pred CCeEEEEEECchhh
Confidence 99999998876543
No 6
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.91 E-value=5.7e-23 Score=193.10 Aligned_cols=182 Identities=19% Similarity=0.301 Sum_probs=151.5
Q ss_pred CCchHHHHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCC
Q 043471 266 TGGIETTKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTK 342 (485)
Q Consensus 266 ~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~ 342 (485)
+........+++.+. +.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|++++. ++..+++++++|+.+
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp SCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh
Confidence 334466677777776 77889999999999999999999855699999999999999999875 344579999999999
Q ss_pred CCCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhC
Q 043471 343 KTYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDA 422 (485)
Q Consensus 343 ~~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 422 (485)
+++++++||+|++..+++|+ ++..+++++.++|||||++++.+...............+......+.+..++.++|+++
T Consensus 108 ~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 186 (267)
T 3kkz_A 108 LPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKA 186 (267)
T ss_dssp CCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHT
T ss_pred CCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHC
Confidence 99888999999999999999 89999999999999999999998765544444444444433333567899999999999
Q ss_pred CCeEEEEeecc-----hHHHHHHHHHHHHHH
Q 043471 423 GFVDIIAEDRT-----EQFVQVLQRELDAIE 448 (485)
Q Consensus 423 Gf~~~~~~~~~-----~~~~~~~~~~~~~~~ 448 (485)
||+++++.... .+|..++..|...+.
T Consensus 187 Gf~~v~~~~~~~~~w~~~~~~~~~~~~~~~~ 217 (267)
T 3kkz_A 187 GYLPVATFILPENCWTDHYFTPKVAAQKIFL 217 (267)
T ss_dssp TEEEEEEEECCGGGTTTTTHHHHHHHHHHHH
T ss_pred CCEEEEEEECCHhHHHHHHHHHHHHHHHHHH
Confidence 99999988766 677888888887773
No 7
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.91 E-value=1.1e-23 Score=203.07 Aligned_cols=199 Identities=23% Similarity=0.292 Sum_probs=164.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCC--CCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGL--KCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~i~~~~~d~~~~~~~~ 347 (485)
.....+++.+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|+++.... ..++++..+|+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---
Confidence 455677888888899999999999999999999877789999999999999999988643 356999999998764
Q ss_pred CCccEEEEccccccc--CCHHHHHHHHHhcCCCCcEEEEEecccCCCCCC-----------hhHHHHHHh---cCCCCCC
Q 043471 348 NSFDVIYSRDTILHI--QDKPALFKSFFKWLKPGGTVLISDYCKSFGTPS-----------VEFSEYIKQ---RGYDLHD 411 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----------~~~~~~~~~---~~~~~~~ 411 (485)
++||+|++..+++|+ +++..+++++.++|||||++++.++........ ..+..++.. .+..+++
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 233 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPS 233 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCC
Confidence 789999999999999 588999999999999999999998765432110 001111111 1235679
Q ss_pred HHHHHHHHHhCCCeEEEEeecchHHHHHHHHHHHHHHhcHHHHHHHhhhhhhhhhhhhcc
Q 043471 412 VKSYGQMLKDAGFVDIIAEDRTEQFVQVLQRELDAIEKDKDAFIKDFSEVFCFFHLDCLS 471 (485)
Q Consensus 412 ~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (485)
.+++.++++++||+++.++..+.+|..++..|..++...++++...+++.+.+.|...+.
T Consensus 234 ~~~~~~~l~~aGf~~~~~~~~~~~y~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 293 (318)
T 2fk8_A 234 TEMMVEHGEKAGFTVPEPLSLRPHYIKTLRIWGDTLQSNKDKAIEVTSEEVYNRYMKYLR 293 (318)
T ss_dssp HHHHHHHHHHTTCBCCCCEECHHHHHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEEecchhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998888888887765543
No 8
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.90 E-value=5.9e-22 Score=185.03 Aligned_cols=167 Identities=22% Similarity=0.337 Sum_probs=139.6
Q ss_pred CCchHHHHHHHHHc-CCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCC
Q 043471 266 TGGIETTKEFVAKL-DLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTK 342 (485)
Q Consensus 266 ~~~~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~ 342 (485)
+........+++.+ .++++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|+++... ...+++++++|+.+
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 107 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN 107 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 34456677777777 5778889999999999999999998766999999999999999998763 44569999999999
Q ss_pred CCCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhC
Q 043471 343 KTYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDA 422 (485)
Q Consensus 343 ~~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 422 (485)
+++++++||+|++..+++|+ ++..+++++.++|||||++++.+...............+......+.+.+++.++|+++
T Consensus 108 ~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 186 (257)
T 3f4k_A 108 LPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERA 186 (257)
T ss_dssp CSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHT
T ss_pred CCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHC
Confidence 99888999999999999999 89999999999999999999998765544444444444444334567899999999999
Q ss_pred CCeEEEEeecc
Q 043471 423 GFVDIIAEDRT 433 (485)
Q Consensus 423 Gf~~~~~~~~~ 433 (485)
||+++.....+
T Consensus 187 Gf~~v~~~~~~ 197 (257)
T 3f4k_A 187 GYTPTAHFILP 197 (257)
T ss_dssp TEEEEEEEECC
T ss_pred CCeEEEEEECC
Confidence 99999887655
No 9
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.89 E-value=5.8e-22 Score=190.45 Aligned_cols=173 Identities=21% Similarity=0.303 Sum_probs=143.1
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCCCC
Q 043471 272 TKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 272 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~~~ 348 (485)
...+++.+. +.++.+|||+|||+|.++..++++++.+|+|+|+|+.+++.|++++.. +..++++..+|+.+++++++
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 456777776 788999999999999999999988778999999999999999998764 34579999999999998889
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCC--CChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeE
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGT--PSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVD 426 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 426 (485)
+||+|++..+++|+ ++..+++++.++|||||++++.++...... ...............+++.+++.++|+++||++
T Consensus 185 ~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~ 263 (312)
T 3vc1_A 185 AVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVP 263 (312)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEE
T ss_pred CEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEE
Confidence 99999999999999 699999999999999999999987655432 222222222223335778999999999999999
Q ss_pred EEEeecchHHHHHHHHHHHHHH
Q 043471 427 IIAEDRTEQFVQVLQRELDAIE 448 (485)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~ 448 (485)
+.++..+. .++..|..++.
T Consensus 264 ~~~~~~~~---~~~~~w~~~~~ 282 (312)
T 3vc1_A 264 HTIVDLTP---DTLPYWELRAT 282 (312)
T ss_dssp EEEEECHH---HHHHHHHHHTT
T ss_pred EEEEeCCH---HHHHHHHHHHH
Confidence 99998874 46677777765
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.88 E-value=1.1e-21 Score=183.14 Aligned_cols=169 Identities=21% Similarity=0.178 Sum_probs=138.7
Q ss_pred ccCCchHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCC
Q 043471 264 VSTGGIETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCT 341 (485)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~ 341 (485)
..+.....+..+++.+.+.++.+|||||||+|.++..+++.++.+++|+|+|+.+++.|+++.. ++..++++.++|+.
T Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 17 HNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA 96 (256)
T ss_dssp SSSCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT
T ss_pred cCCCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH
Confidence 3344456778888999999999999999999999999998878899999999999999999875 34457999999999
Q ss_pred CCCCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHH-hcCCCCCCHHHHHHHHH
Q 043471 342 KKTYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIK-QRGYDLHDVKSYGQMLK 420 (485)
Q Consensus 342 ~~~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 420 (485)
++++ +++||+|++..+++|++++..++++++++|||||++++.+...........+...+. .....+.+..++.++|+
T Consensus 97 ~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (256)
T 1nkv_A 97 GYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFD 175 (256)
T ss_dssp TCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHH
T ss_pred hCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHH
Confidence 9887 789999999999999999999999999999999999999865544333332222221 11225678999999999
Q ss_pred hCCCeEEEEeecc
Q 043471 421 DAGFVDIIAEDRT 433 (485)
Q Consensus 421 ~aGf~~~~~~~~~ 433 (485)
++||+++.+....
T Consensus 176 ~aGf~~~~~~~~~ 188 (256)
T 1nkv_A 176 DLGYDVVEMVLAD 188 (256)
T ss_dssp TTTBCCCEEEECC
T ss_pred HCCCeeEEEEeCC
Confidence 9999998776544
No 11
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.88 E-value=1e-21 Score=183.71 Aligned_cols=162 Identities=20% Similarity=0.230 Sum_probs=130.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~ 349 (485)
.+..+++.+...++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|+++....+ .++.+..+|+.++|+++++
T Consensus 25 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 103 (260)
T 1vl5_A 25 DLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDER 103 (260)
T ss_dssp CHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTC
T ss_pred HHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCC
Confidence 35567777778889999999999999999999884 599999999999999999875332 3799999999999998899
Q ss_pred ccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHH----HHHhcCCCCCCHHHHHHHHHhCCCe
Q 043471 350 FDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSE----YIKQRGYDLHDVKSYGQMLKDAGFV 425 (485)
Q Consensus 350 fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~aGf~ 425 (485)
||+|++..+++|++|+..+|++++++|||||++++.+...........+.. ...+.+...++..++.++|+++||+
T Consensus 104 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFE 183 (260)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCE
T ss_pred EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCe
Confidence 999999999999999999999999999999999998765443211111111 1112234667899999999999999
Q ss_pred EEEEeecc
Q 043471 426 DIIAEDRT 433 (485)
Q Consensus 426 ~~~~~~~~ 433 (485)
++.+....
T Consensus 184 ~~~~~~~~ 191 (260)
T 1vl5_A 184 LEELHCFH 191 (260)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEee
Confidence 98776543
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=1.5e-21 Score=181.64 Aligned_cols=156 Identities=18% Similarity=0.304 Sum_probs=120.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC---CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF---DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYP 346 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~ 346 (485)
+..+++.. ++++.+|||+|||+|..+..+++++ +++|+|+|+|+.|++.|++++.. ...+++++++|+.++|+
T Consensus 60 i~~l~~~~-~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~- 137 (261)
T 4gek_A 60 IGMLAERF-VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI- 137 (261)
T ss_dssp HHHHHHHH-CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-
T ss_pred HHHHHHHh-CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-
Confidence 33444443 7889999999999999999999875 57999999999999999999764 34589999999999876
Q ss_pred CCCccEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChh-----HHHHHHh---------------
Q 043471 347 ENSFDVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVE-----FSEYIKQ--------------- 404 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-----~~~~~~~--------------- 404 (485)
++||+|+++.+++|++ ++..+|++++++|||||++++.+........... ...+...
T Consensus 138 -~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l 216 (261)
T 4gek_A 138 -ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSML 216 (261)
T ss_dssp -CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHH
T ss_pred -cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhh
Confidence 4699999999999996 4567899999999999999999876543321110 0111111
Q ss_pred -cCCCCCCHHHHHHHHHhCCCeEEEEe
Q 043471 405 -RGYDLHDVKSYGQMLKDAGFVDIIAE 430 (485)
Q Consensus 405 -~~~~~~~~~~~~~~l~~aGf~~~~~~ 430 (485)
......+.+++.++|+++||+.+++-
T Consensus 217 ~~~~~~~s~~~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 217 ENVMLTDSVETHKARLHKAGFEHSELW 243 (261)
T ss_dssp HHHCCCBCHHHHHHHHHHHTCSEEEEE
T ss_pred cccccCCCHHHHHHHHHHcCCCeEEEE
Confidence 11235678999999999999988753
No 13
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.87 E-value=3.5e-21 Score=177.72 Aligned_cols=164 Identities=18% Similarity=0.244 Sum_probs=133.8
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPE 347 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~ 347 (485)
.+....+++.+.++++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...+ .++++..+|+.++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 355667888889999999999999999999999988 4699999999999999998875322 37999999999999888
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHH----HHhcCCCCCCHHHHHHHHHhCC
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEY----IKQRGYDLHDVKSYGQMLKDAG 423 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~aG 423 (485)
++||+|++..+++|++++..++++++++|||||++++.+...........+... ..+.+...++.+++.++|+++|
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 165 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQ 165 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTT
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCC
Confidence 999999999999999999999999999999999999987655432111111111 1122346678999999999999
Q ss_pred CeEEEEeecc
Q 043471 424 FVDIIAEDRT 433 (485)
Q Consensus 424 f~~~~~~~~~ 433 (485)
|+++.+....
T Consensus 166 f~~~~~~~~~ 175 (239)
T 1xxl_A 166 LAYQDIQKWN 175 (239)
T ss_dssp EEEEEEEEEE
T ss_pred CcEEEEEeec
Confidence 9998776553
No 14
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.86 E-value=1.4e-21 Score=175.55 Aligned_cols=145 Identities=13% Similarity=0.176 Sum_probs=114.4
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC--------------CCCeEEEEe
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH--------------FENVKFMCA 107 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~--------------~~~~~~~~~ 107 (485)
....+++.+...++.+|||+|||+|..+..|+++|.+|+|+|+|+.|++.|+++... ..+++++++
T Consensus 10 ~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 10 DLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 344556666667789999999999999999999999999999999999999998642 358999999
Q ss_pred eccCCCCCCCC-CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHH
Q 043471 108 DVTSPDLTFSE-DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKV 186 (485)
Q Consensus 108 d~~~~~~~~~~-~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (485)
|+.+ +++++ ++||+|++..+++|++.+...+++++++++|||||++++........ ....+.+..+.+.+.++
T Consensus 90 d~~~--l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~----~~~~~~~~~~~~el~~~ 163 (203)
T 1pjz_A 90 DFFA--LTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA----LLEGPPFSVPQTWLHRV 163 (203)
T ss_dssp CCSS--STHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS----SSSSCCCCCCHHHHHHT
T ss_pred cccc--CCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc----ccCCCCCCCCHHHHHHH
Confidence 9988 55554 79999999999999997778889999999999999855543333211 11122333477888888
Q ss_pred hhhccee
Q 043471 187 FKECQIQ 193 (485)
Q Consensus 187 ~~~~~~~ 193 (485)
+++ ||.
T Consensus 164 ~~~-gf~ 169 (203)
T 1pjz_A 164 MSG-NWE 169 (203)
T ss_dssp SCS-SEE
T ss_pred hcC-CcE
Confidence 887 773
No 15
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.86 E-value=5.2e-22 Score=183.40 Aligned_cols=170 Identities=18% Similarity=0.247 Sum_probs=136.7
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC--CCCCCCccEEEEccc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK--TYPENSFDVIYSRDT 358 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~i~~~~~ 358 (485)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +++..+|+.+. ++++++||+|++..+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~ 110 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHF 110 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESC
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCc
Confidence 467789999999999999999987 78999999999999999875 67888888775 778899999999999
Q ss_pred ccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeecc---
Q 043471 359 ILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDRT--- 433 (485)
Q Consensus 359 ~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~--- 433 (485)
++|++ +...++++++++|||||++++..+..... ......+..+.+...++.+++.++++++||+++.+....
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~ 188 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL--YSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEFFEECE 188 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH--HHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEEECCCC
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh--HHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEEeccCc
Confidence 99998 45999999999999999999987653211 111112223344567889999999999999999887665
Q ss_pred -------hHHHHHHHHHHHH-HHhcHHHHHHH-hhhh
Q 043471 434 -------EQFVQVLQRELDA-IEKDKDAFIKD-FSEV 461 (485)
Q Consensus 434 -------~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~ 461 (485)
.+ ..++..|.++ +..+++.+... |++.
T Consensus 189 ~~~~l~~~~-~~~l~~w~~~~~~~~~~~~~~~~f~~~ 224 (240)
T 3dli_A 189 ELTKLAKID-SNTVSEEVIRVINENIEKLNRILFGPQ 224 (240)
T ss_dssp TTTSCCCCC-CSSSCHHHHHHHHHHHHHHHHHHSCCS
T ss_pred ccccccccc-cccccHHHHHhhhhhHHHHHhhccCcc
Confidence 44 5567788888 77777777766 6654
No 16
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.86 E-value=1.3e-21 Score=177.90 Aligned_cols=160 Identities=19% Similarity=0.353 Sum_probs=128.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~~ 347 (485)
.....+++.+..+++ +|||+|||+|.++..+++..+.+++|+|+|+.+++.|++++.. ...++++.++|+.++++++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 456677777777777 9999999999999999987667999999999999999998764 3457999999999999888
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCCh----------hHHHHHHhcCCCCCCHHHHHH
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSV----------EFSEYIKQRGYDLHDVKSYGQ 417 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 417 (485)
++||+|++..+++|++++..++++++++|||||++++.+.......... .+..... .+...++.+++.+
T Consensus 110 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 188 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNR-KNISQENVERFQN 188 (219)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHH-HHSSHHHHHHHHH
T ss_pred ccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhh-hccccCCHHHHHH
Confidence 9999999999999999999999999999999999999875443211100 0111111 1234457799999
Q ss_pred HHHhCCCeEEEEee
Q 043471 418 MLKDAGFVDIIAED 431 (485)
Q Consensus 418 ~l~~aGf~~~~~~~ 431 (485)
+|+++||+++++..
T Consensus 189 ~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 189 VLDEIGISSYEIIL 202 (219)
T ss_dssp HHHHHTCSSEEEEE
T ss_pred HHHHcCCCeEEEEe
Confidence 99999999887754
No 17
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.85 E-value=4.1e-21 Score=174.87 Aligned_cols=156 Identities=19% Similarity=0.192 Sum_probs=125.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCcc
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFD 351 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 351 (485)
...+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. .++++..+|+.+++++ ++||
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~-~~fD 108 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVP-TSID 108 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCC-SCCS
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCC-CCeE
Confidence 445666666668889999999999999999988 7899999999999999999875 4789999999999887 8999
Q ss_pred EEEEcccccccCCHHH--HHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHh----------cCCCCCCHHHHHHHH
Q 043471 352 VIYSRDTILHIQDKPA--LFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQ----------RGYDLHDVKSYGQML 419 (485)
Q Consensus 352 ~i~~~~~~~~~~~~~~--~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l 419 (485)
+|++..+++|+++... +++++.++|||||.+++.++................. ....+++.+++.++|
T Consensus 109 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 188 (220)
T 3hnr_A 109 TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIF 188 (220)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHH
T ss_pred EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHH
Confidence 9999999999998877 9999999999999999997554332111111111111 112456899999999
Q ss_pred HhCCCeEEEEeec
Q 043471 420 KDAGFVDIIAEDR 432 (485)
Q Consensus 420 ~~aGf~~~~~~~~ 432 (485)
+++||+++.....
T Consensus 189 ~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 189 ENNGFHVTFTRLN 201 (220)
T ss_dssp HHTTEEEEEEECS
T ss_pred HHCCCEEEEeecc
Confidence 9999998877654
No 18
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.85 E-value=2.6e-20 Score=196.00 Aligned_cols=348 Identities=15% Similarity=0.133 Sum_probs=193.2
Q ss_pred CccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc---------------------------------------
Q 043471 36 SDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--------------------------------------- 76 (485)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------------------------------------- 76 (485)
.++.+.....++......++.+|||.+||+|.+++.++..+
T Consensus 172 apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~ 251 (703)
T 3v97_A 172 APIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 251 (703)
T ss_dssp CSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhc
Confidence 34555666777887777788899999999999998877642
Q ss_pred -----CcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhc-c-ChHHHHHHHHHH-
Q 043471 77 -----GHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMY-L-SDKEVEKLAERM- 145 (485)
Q Consensus 77 -----~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~-~-~~~~~~~~l~~~- 145 (485)
.+|+|+|+++.+++.|+.+.... ..++|.++|+.++..+..+++||+|+++=.+.. + .......+++.+
T Consensus 252 ~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~ 331 (703)
T 3v97_A 252 LAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLG 331 (703)
T ss_dssp HHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHH
T ss_pred cccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHH
Confidence 47999999999999999875322 358999999988543444458999999832211 1 122344455544
Q ss_pred --HhhcccCcEEEEEeccCCC----CCccc------------c-----CCC----CCCCCChhHHHHHhhhcce------
Q 043471 146 --VKWLKVGGYIFFRESCFHQ----SGDSK------------R-----KHN----PTHYREPRFYSKVFKECQI------ 192 (485)
Q Consensus 146 --~~~L~pgG~l~~~~~~~~~----~~~~~------------~-----~~~----~~~~~~~~~~~~~~~~~~~------ 192 (485)
.+.+.|||.+++-...... +.... + ... .......+++.+.++++--
T Consensus 332 ~~lk~~~~g~~~~ilt~~~~l~~~~glk~~k~~~l~nG~l~~~~~~y~~~~~~~~~~~~~~~~~~~~rl~~a~~~r~~~~ 411 (703)
T 3v97_A 332 RIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWA 411 (703)
T ss_dssp HHHHHHCTTCEEEEEESCHHHHHTTCCCEEEEEEEEETTEEEEEEEEECCCC-------CCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCeEEEEeCCHHHHHHhCCCcccceeeecCCEEEEEEEEEecccccccccCchHHHHHHHHHHHHHHHHHHh
Confidence 4455589998885433210 00000 0 000 0001133444444432211
Q ss_pred ecCCCCceeEEEeeeeecc---------eEEeecC--------ch-hHHHHHHHHhhcc---C--------c---hh---
Q 043471 193 QDASGNSFELSLVGYKCIG---------AYVKNKK--------NQ-NQICWIWQKVRSQ---N--------D---RG--- 237 (485)
Q Consensus 193 ~~~~g~~~~~~~~~~~~~~---------~~~~~~~--------~~-~~~~~~~~~~~~~---~--------~---~~--- 237 (485)
.....+.+.+........+ .++.... .+ .........+... . . +.
T Consensus 412 ~~~~~~~~Rl~~~elp~~gl~vD~y~d~lvvq~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~k~r~~~~g~~~ 491 (703)
T 3v97_A 412 RQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQ 491 (703)
T ss_dssp HHHTBCEEEEEESCSTTSCEEEEEETTEEEEEECC-------CHHHHHHHHHHHHHHHHHTCCGGGEEEECCC-------
T ss_pred ccCCCcEEEEEcccCCcccEEEEEECCEEEEEeCCCccccchHHHHHHHHHHHHHHHHHhCCCcceeEEeccccccCcch
Confidence 1111122222211110000 1111110 00 0011111111000 0 0 00
Q ss_pred HHHhhhh---hhccccchhHH---HHHhccccccCCchHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEE
Q 043471 238 FQQFLDN---VQYKLNGILRY---ERVFGVGFVSTGGIETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVG 311 (485)
Q Consensus 238 ~~~~~d~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g 311 (485)
+..+... ......+.... ......+++.. .+....++..+ .++.+|||+|||+|.++..++.....+|++
T Consensus 492 ~~~~g~~~~~~~v~E~g~~~~v~~~~~~~tG~f~d--~r~~r~~l~~~--~~g~~VLDlg~GtG~~sl~aa~~ga~~V~a 567 (703)
T 3v97_A 492 YQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLD--HRIARRMLGQM--SKGKDFLNLFSYTGSATVHAGLGGARSTTT 567 (703)
T ss_dssp -----CCSCCEEEEETTEEEEECSSSSSSCSCCGG--GHHHHHHHHHH--CTTCEEEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred hhccCCCCceEEEEECCEEEEEeccccccCCCccc--HHHHHHHHHHh--cCCCcEEEeeechhHHHHHHHHCCCCEEEE
Confidence 1110000 00000000000 00000111111 23444555543 368899999999999999998863347999
Q ss_pred EeCCHHHHHHHHHHhcC--CC-CCeEEEEccCCCC-CCCCCCccEEEEccc-----------ccccCCHHHHHHHHHhcC
Q 043471 312 IDLSINMISFALERAIG--LK-CSVEFEVADCTKK-TYPENSFDVIYSRDT-----------ILHIQDKPALFKSFFKWL 376 (485)
Q Consensus 312 ~D~s~~~~~~a~~~~~~--~~-~~i~~~~~d~~~~-~~~~~~fD~i~~~~~-----------~~~~~~~~~~l~~~~~~L 376 (485)
+|+|+.+++.|++++.. +. .+++++++|+.+. +...++||+|++... +.+..+...+++.+.++|
T Consensus 568 VD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~L 647 (703)
T 3v97_A 568 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLL 647 (703)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHE
T ss_pred EeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999763 33 4799999998763 334578999999653 233356778899999999
Q ss_pred CCCcEEEEEec
Q 043471 377 KPGGTVLISDY 387 (485)
Q Consensus 377 kpgG~l~i~~~ 387 (485)
+|||+++++..
T Consensus 648 kpgG~L~~s~~ 658 (703)
T 3v97_A 648 RAGGTIMFSNN 658 (703)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCcEEEEEEC
Confidence 99999998854
No 19
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.85 E-value=2.8e-21 Score=173.43 Aligned_cols=154 Identities=12% Similarity=0.127 Sum_probs=121.6
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC-------------CCCCeEE
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG-------------LKCSVEF 335 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~-------------~~~~i~~ 335 (485)
.+.+.++++.+.+.++.+|||+|||+|..+..++++ |.+|+|+|+|+.|++.|+++... ...++++
T Consensus 8 ~~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ 86 (203)
T 1pjz_A 8 NKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEI 86 (203)
T ss_dssp THHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEE
T ss_pred CHHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEE
Confidence 345667778888888899999999999999999988 78999999999999999998642 1347999
Q ss_pred EEccCCCCCCCC-CCccEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCH
Q 043471 336 EVADCTKKTYPE-NSFDVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDV 412 (485)
Q Consensus 336 ~~~d~~~~~~~~-~~fD~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (485)
+++|+.++++++ ++||+|++..+++|++ +...++++++|+|||||++++.......... .......+.
T Consensus 87 ~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~---------~~~~~~~~~ 157 (203)
T 1pjz_A 87 WCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALL---------EGPPFSVPQ 157 (203)
T ss_dssp EEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSS---------SSCCCCCCH
T ss_pred EECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcccc---------CCCCCCCCH
Confidence 999999998765 7999999999999996 4567899999999999995554333221100 001123578
Q ss_pred HHHHHHHHhCCCeEEEEeecc
Q 043471 413 KSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 413 ~~~~~~l~~aGf~~~~~~~~~ 433 (485)
+++.+++++ ||+++.++...
T Consensus 158 ~el~~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 158 TWLHRVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp HHHHHTSCS-SEEEEEEEESS
T ss_pred HHHHHHhcC-CcEEEEecccc
Confidence 999999998 99988776544
No 20
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.85 E-value=5e-21 Score=177.09 Aligned_cols=135 Identities=11% Similarity=0.150 Sum_probs=107.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC-------------------CCCCeEEEEeeccCC
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG-------------------HFENVKFMCADVTSP 112 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~-------------------~~~~~~~~~~d~~~~ 112 (485)
..++.+|||+|||+|..+..|+++|.+|+|||+|+.|++.|+++.. ...+++++++|+.+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~- 144 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD- 144 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT-
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc-
Confidence 3567899999999999999999999999999999999999987763 12589999999988
Q ss_pred CCCCCC-CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcc
Q 043471 113 DLTFSE-DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQ 191 (485)
Q Consensus 113 ~~~~~~-~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (485)
+++++ ++||+|++..+++|++.+....+++++.++|||||.+++......... ...+.+..+++.+.+++...
T Consensus 145 -l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~----~~g~~~~~~~~el~~~l~~~- 218 (252)
T 2gb4_A 145 -LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK----HAGPPFYVPSAELKRLFGTK- 218 (252)
T ss_dssp -GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS----CCCSSCCCCHHHHHHHHTTT-
T ss_pred -CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc----CCCCCCCCCHHHHHHHhhCC-
Confidence 55554 899999999999999877788999999999999999976443322211 11233334778888888863
Q ss_pred ee
Q 043471 192 IQ 193 (485)
Q Consensus 192 ~~ 193 (485)
|.
T Consensus 219 f~ 220 (252)
T 2gb4_A 219 CS 220 (252)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 21
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.85 E-value=5.9e-21 Score=180.12 Aligned_cols=196 Identities=15% Similarity=0.148 Sum_probs=145.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC--CEEEEEeCCHH------HHHHHHHHhcCCC--CCeEEEEcc
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD--VHVVGIDLSIN------MISFALERAIGLK--CSVEFEVAD 339 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~------~~~~a~~~~~~~~--~~i~~~~~d 339 (485)
.....+++.+.+.++.+|||||||+|.++..++++.+ .+|+|+|+|+. +++.|++++...+ .++++..+|
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 4556788888889999999999999999999998853 79999999997 9999999886433 579999998
Q ss_pred ---CCCCCCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCCh--hH-----HHHHH------
Q 043471 340 ---CTKKTYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSV--EF-----SEYIK------ 403 (485)
Q Consensus 340 ---~~~~~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--~~-----~~~~~------ 403 (485)
...+++++++||+|++..+++|++++..+++.+.++++|||++++.++......... .. .....
T Consensus 110 ~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (275)
T 3bkx_A 110 NLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSD 189 (275)
T ss_dssp CTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCT
T ss_pred hhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccc
Confidence 445566788999999999999999999888888888888999999987665432211 10 11110
Q ss_pred -hcCCCCCCHHHHHHHHHhCCCeEEEEeecchHHHHHHH--HHHHHHHhcHHHHHH---Hhhhhhhhhhhh
Q 043471 404 -QRGYDLHDVKSYGQMLKDAGFVDIIAEDRTEQFVQVLQ--RELDAIEKDKDAFIK---DFSEVFCFFHLD 468 (485)
Q Consensus 404 -~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 468 (485)
.....+++.+++.++++++||+++...... ..++. .|...+.....+.+. .|++.+++.|..
T Consensus 190 ~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~---~~~~~~~~W~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 257 (275)
T 3bkx_A 190 VANIRTLITPDTLAQIAHDNTWTYTAGTIVE---DPTLDDAHWEIATTNALLTELKLSTDLRDRVKPLLEA 257 (275)
T ss_dssp TCSCCCCCCHHHHHHHHHHHTCEEEECCCBC---CTTCTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHCCCeeEEEEEec---CCCCCCchhhHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 111246899999999999999999887652 23333 565543332222222 267778887776
No 22
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.85 E-value=5.5e-21 Score=178.10 Aligned_cols=180 Identities=23% Similarity=0.411 Sum_probs=135.7
Q ss_pred HHHHHHhhhcCcCcchhhhhcC-CCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc-CcEEEEeCChHH
Q 043471 11 EIQKNYWMEHSANLTVEAMMLD-SKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA-GHVIALDFIDSV 88 (485)
Q Consensus 11 ~~~~~yw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~ 88 (485)
.....||+.....+. .+... .............+++.+...++.+|||||||+|.++..|++.+ .+|+|+|+|+.+
T Consensus 51 ~~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~ 128 (254)
T 1xtp_A 51 GKALEYWRTVPATVS--GVLGGMDHVHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHM 128 (254)
T ss_dssp HHHHHHHHTSCSSHH--HHTTTCGGGHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHH
T ss_pred hhhhhHHhcCCcccc--ceecCcCccCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHH
Confidence 345778887554332 11110 01111222344677888877788999999999999999999885 469999999999
Q ss_pred HHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcc
Q 043471 89 IKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDS 168 (485)
Q Consensus 89 ~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 168 (485)
++.|+++....++++++++|+.. +++++++||+|++..+++|++++....+++++.++|+|||++++.+.........
T Consensus 129 ~~~a~~~~~~~~~~~~~~~d~~~--~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 206 (254)
T 1xtp_A 129 LEEAKRELAGMPVGKFILASMET--ATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFL 206 (254)
T ss_dssp HHHHHHHTTTSSEEEEEESCGGG--CCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEE
T ss_pred HHHHHHHhccCCceEEEEccHHH--CCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccce
Confidence 99999987655689999999988 5567889999999999999987668899999999999999999988654333222
Q ss_pred ccCCCCCCCCChhHHHHHhhhcceec
Q 043471 169 KRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
..........+.+.+.++++++||..
T Consensus 207 ~~~~~~~~~~~~~~~~~~l~~aGf~~ 232 (254)
T 1xtp_A 207 VDKEDSSLTRSDIHYKRLFNESGVRV 232 (254)
T ss_dssp EETTTTEEEBCHHHHHHHHHHHTCCE
T ss_pred ecccCCcccCCHHHHHHHHHHCCCEE
Confidence 22333344558899999999999854
No 23
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.85 E-value=1.7e-20 Score=170.67 Aligned_cols=155 Identities=23% Similarity=0.275 Sum_probs=131.1
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~ 348 (485)
...+++.+.+.++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.|++++...+ .++++..+|+.+++++++
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSS
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCC
Confidence 4567778888889999999999999999999885 4699999999999999999875332 279999999999988889
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
+||+|++..+++|++++..+++++.++|||||++++.++.......... ....++.+++.++++++||+++.
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPP--------PEEVYSEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCC--------GGGSCCHHHHHHHHHHTTCEEEE
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCc--------hhcccCHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999999999999999999876554322111 12456899999999999999988
Q ss_pred Eeecch
Q 043471 429 AEDRTE 434 (485)
Q Consensus 429 ~~~~~~ 434 (485)
......
T Consensus 178 ~~~~~~ 183 (219)
T 3dh0_A 178 VVEVGK 183 (219)
T ss_dssp EEEETT
T ss_pred EEeeCC
Confidence 766543
No 24
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.85 E-value=2.2e-21 Score=181.46 Aligned_cols=155 Identities=19% Similarity=0.229 Sum_probs=127.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
.....+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++. ++++.++|+.++++++++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~~~~~~~~ 94 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAENLALPDKS 94 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHHHSSCCCT-----TEEEECCCTTSCCSCTTC
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHHHHHHhcc-----CCEEEECchhhCCCCCCC
Confidence 56677788888888999999999999999999985 789999999999998876543 799999999999998899
Q ss_pred ccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCC---hhHHHHHHhcCCCCCCHHHHHHHHHhCCCeE
Q 043471 350 FDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPS---VEFSEYIKQRGYDLHDVKSYGQMLKDAGFVD 426 (485)
Q Consensus 350 fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 426 (485)
||+|++..+++|++++..++++++++|| ||++++.++........ ..+.......+..+.+.+.+. +|+++||++
T Consensus 95 fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~ 172 (261)
T 3ege_A 95 VDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRR 172 (261)
T ss_dssp BSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSE
T ss_pred EeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCc
Confidence 9999999999999999999999999999 99998887764332211 112222223334567788899 999999999
Q ss_pred EEEeec
Q 043471 427 IIAEDR 432 (485)
Q Consensus 427 ~~~~~~ 432 (485)
+.+...
T Consensus 173 v~~~~~ 178 (261)
T 3ege_A 173 VEAIPF 178 (261)
T ss_dssp EEEEEC
T ss_pred eeEEEe
Confidence 887654
No 25
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.85 E-value=3.6e-21 Score=180.24 Aligned_cols=149 Identities=17% Similarity=0.312 Sum_probs=120.5
Q ss_pred CCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcccc
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTI 359 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~ 359 (485)
.+.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++.....++.+..+|+.++++++++||+|++..++
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 5677889999999999999999987 789999999999999999997444568999999999998888999999999999
Q ss_pred cccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCC----ChhHHHHHHhcCC------CCCCHHHHHHHHHhCCCeEEEE
Q 043471 360 LHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTP----SVEFSEYIKQRGY------DLHDVKSYGQMLKDAGFVDIIA 429 (485)
Q Consensus 360 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----~~~~~~~~~~~~~------~~~~~~~~~~~l~~aGf~~~~~ 429 (485)
+|++++..+++++.++|||||++++. +....... ...+.......+. ...+.+++.++|+++||+++.+
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 99999999999999999999999988 33221111 1112222222222 2456788999999999998765
Q ss_pred e
Q 043471 430 E 430 (485)
Q Consensus 430 ~ 430 (485)
.
T Consensus 194 ~ 194 (263)
T 2yqz_A 194 E 194 (263)
T ss_dssp E
T ss_pred E
Confidence 4
No 26
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.84 E-value=6.4e-21 Score=171.32 Aligned_cols=136 Identities=15% Similarity=0.166 Sum_probs=115.7
Q ss_pred CCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccC
Q 043471 55 GKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLS 134 (485)
Q Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~ 134 (485)
+.+|||||||+|.++..|++.+.+|+|+|+|+.+++.|+++. ++++++++|+.+ +++++++||+|+++.+++|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~--~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH---PSVTFHHGTITD--LSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC---TTSEEECCCGGG--GGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC---CCCeEEeCcccc--cccCCCCeEEEEehhhHhcCC
Confidence 789999999999999999999999999999999999999984 589999999988 667789999999999999998
Q ss_pred hHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceecC
Q 043471 135 DKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 135 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
.+....+++++.++|+|||.+++.++..................+.+.+.++++++||...
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 177 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVT 177 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEE
Confidence 5558899999999999999999988765543333233334445588999999999999653
No 27
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.84 E-value=2.2e-20 Score=172.71 Aligned_cols=149 Identities=20% Similarity=0.287 Sum_probs=122.7
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccccc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTIL 360 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~ 360 (485)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..+++++++|+.++++++++||+|++..+++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERGE--GPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTTC--BTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhcc--cCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 347789999999999999999988 7899999999999999988752 3579999999999998889999999999999
Q ss_pred ccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHH-hcCCCCCCHHHHHHHHHhCCCeEEEEeec
Q 043471 361 HIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIK-QRGYDLHDVKSYGQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 361 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 432 (485)
|++++..++++++++|+|||++++.++..........+..... ......++..++.++++++||+++.....
T Consensus 128 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 128 WTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp SSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred hccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 9999999999999999999999999765433222222211111 12235678999999999999999987643
No 28
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.84 E-value=5.2e-20 Score=169.23 Aligned_cols=159 Identities=22% Similarity=0.332 Sum_probs=125.8
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 272 TKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 272 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
...+++.+. ..++.+|||+|||+|.++..+++.. +.+++|+|+|+.+++.|+++....+ +++++++|+.+++++ ++
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~-~~ 109 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYDFE-EK 109 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCCCC-SC
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccCCC-CC
Confidence 344555554 5577899999999999999999987 6799999999999999999987655 899999999999876 89
Q ss_pred ccEEEEcccccccCCHH--HHHHHHHhcCCCCcEEEEEecccCCCCCChh-----HHHHHHh---------------cCC
Q 043471 350 FDVIYSRDTILHIQDKP--ALFKSFFKWLKPGGTVLISDYCKSFGTPSVE-----FSEYIKQ---------------RGY 407 (485)
Q Consensus 350 fD~i~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-----~~~~~~~---------------~~~ 407 (485)
||+|++..+++|+++.. .++++++++|||||++++.+........... +...... ...
T Consensus 110 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (234)
T 3dtn_A 110 YDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLD 189 (234)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CC
T ss_pred ceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccc
Confidence 99999999999997655 5999999999999999999876543221110 1111100 123
Q ss_pred CCCCHHHHHHHHHhCCCeEEEEeec
Q 043471 408 DLHDVKSYGQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 408 ~~~~~~~~~~~l~~aGf~~~~~~~~ 432 (485)
..++.+++.++|+++||+++++...
T Consensus 190 ~~~~~~~~~~ll~~aGF~~v~~~~~ 214 (234)
T 3dtn_A 190 KDIEMNQQLNWLKEAGFRDVSCIYK 214 (234)
T ss_dssp CCCBHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccCHHHHHHHHHHcCCCceeeeee
Confidence 4568899999999999999987543
No 29
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=9.5e-21 Score=176.98 Aligned_cols=154 Identities=19% Similarity=0.294 Sum_probs=124.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~ 348 (485)
.....+++.+...++.+|||+|||+|.++..+++.+ +.+++|+|+|+.|++.++++. .++++..+|+.+++ +++
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~~-~~~ 94 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----PNTNFGKADLATWK-PAQ 94 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----TTSEEEECCTTTCC-CSS
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----CCcEEEECChhhcC-ccC
Confidence 456678888888888999999999999999999876 679999999999999999883 37899999999988 778
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHH------------hcCCCCCCHHHHH
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIK------------QRGYDLHDVKSYG 416 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 416 (485)
+||+|++..+++|++++..++++++++|||||++++..+..........+..... +.+..+.+.+++.
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (259)
T 2p35_A 95 KADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYF 174 (259)
T ss_dssp CEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHH
T ss_pred CcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHH
Confidence 9999999999999999999999999999999999999764322111111111110 1234568899999
Q ss_pred HHHHhCCCeEEE
Q 043471 417 QMLKDAGFVDII 428 (485)
Q Consensus 417 ~~l~~aGf~~~~ 428 (485)
++|+++||++..
T Consensus 175 ~~l~~aGf~v~~ 186 (259)
T 2p35_A 175 NALSPKSSRVDV 186 (259)
T ss_dssp HHHGGGEEEEEE
T ss_pred HHHHhcCCceEE
Confidence 999999997543
No 30
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.84 E-value=2.7e-20 Score=172.71 Aligned_cols=145 Identities=15% Similarity=0.139 Sum_probs=118.2
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcccccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTILH 361 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 361 (485)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... ++++.++|+.++ +++++||+|++..+++|
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-QLPRRYDNIVLTHVLEH 115 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-CCSSCEEEEEEESCGGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-CcCCcccEEEEhhHHHh
Confidence 46679999999999999999987 56999999999999999998754 799999999887 46789999999999999
Q ss_pred cCCHHHHHHHHH-hcCCCCcEEEEEecccCCCC----------CCh-hH-HHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 362 IQDKPALFKSFF-KWLKPGGTVLISDYCKSFGT----------PSV-EF-SEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 362 ~~~~~~~l~~~~-~~LkpgG~l~i~~~~~~~~~----------~~~-~~-~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
++++..++++++ ++|||||++++.++...... ... .+ .......+...++.+++.++|+++||+++.
T Consensus 116 ~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 195 (250)
T 2p7i_A 116 IDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTY 195 (250)
T ss_dssp CSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred hcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEE
Confidence 999999999999 99999999999976543210 000 00 011122334578999999999999999998
Q ss_pred Eee
Q 043471 429 AED 431 (485)
Q Consensus 429 ~~~ 431 (485)
+..
T Consensus 196 ~~~ 198 (250)
T 2p7i_A 196 RSG 198 (250)
T ss_dssp EEE
T ss_pred Eee
Confidence 764
No 31
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.84 E-value=3e-20 Score=175.59 Aligned_cols=153 Identities=22% Similarity=0.327 Sum_probs=123.2
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccE
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDV 352 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 352 (485)
..+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.++++. .++.+..+|+.++++ +++||+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD~ 120 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNY----PHLHFDVADARNFRV-DKPLDA 120 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCC-SSCEEE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCc-CCCcCE
Confidence 35566677788899999999999999999984 789999999999999999886 378999999999887 579999
Q ss_pred EEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCC-ChhHHHHHHhc---------CCCCCCHHHHHHHHHhC
Q 043471 353 IYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTP-SVEFSEYIKQR---------GYDLHDVKSYGQMLKDA 422 (485)
Q Consensus 353 i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~l~~a 422 (485)
|++..+++|++++..++++++++|||||++++..+....... ...+....... ...+.+.+++.++|+++
T Consensus 121 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 200 (279)
T 3ccf_A 121 VFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQ 200 (279)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHH
T ss_pred EEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999998765322100 01111111111 22467899999999999
Q ss_pred CCeEEEEee
Q 043471 423 GFVDIIAED 431 (485)
Q Consensus 423 Gf~~~~~~~ 431 (485)
||+++.++.
T Consensus 201 Gf~~~~~~~ 209 (279)
T 3ccf_A 201 GFDVTYAAL 209 (279)
T ss_dssp TEEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999987653
No 32
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.83 E-value=2.7e-20 Score=171.14 Aligned_cols=152 Identities=20% Similarity=0.232 Sum_probs=120.8
Q ss_pred hhHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCC
Q 043471 42 ERPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 42 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 118 (485)
....+++.+. ..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....++++++++|+.+ ++++
T Consensus 31 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~--~~~~- 107 (234)
T 3dtn_A 31 FYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSK--YDFE- 107 (234)
T ss_dssp HHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTT--CCCC-
T ss_pred HHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhc--cCCC-
Confidence 3355666665 456789999999999999999998 779999999999999999998766699999999988 4444
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc-------------------------cCCC
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK-------------------------RKHN 173 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-------------------------~~~~ 173 (485)
++||+|++..+++|++++....+++++.++|+|||.+++.+.......... ....
T Consensus 108 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (234)
T 3dtn_A 108 EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSK 187 (234)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----
T ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcc
Confidence 899999999999999987777899999999999999999886543221100 0112
Q ss_pred CCCCCChhHHHHHhhhcceecCC
Q 043471 174 PTHYREPRFYSKVFKECQIQDAS 196 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~ 196 (485)
.....+.+.+.++++++||..+.
T Consensus 188 ~~~~~~~~~~~~ll~~aGF~~v~ 210 (234)
T 3dtn_A 188 LDKDIEMNQQLNWLKEAGFRDVS 210 (234)
T ss_dssp CCCCCBHHHHHHHHHHTTCEEEE
T ss_pred cccccCHHHHHHHHHHcCCCcee
Confidence 22334678899999999997654
No 33
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.83 E-value=2.1e-20 Score=174.00 Aligned_cols=146 Identities=18% Similarity=0.314 Sum_probs=103.8
Q ss_pred CCCCCChhHHHHHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cE
Q 043471 1 MGTQSNHGEREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HV 79 (485)
Q Consensus 1 ~~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v 79 (485)
|+|.++. .++..||+.+........ .......+..+++.++..++.+|||||||+|.++..+++.+. +|
T Consensus 1 M~m~~~~---y~~~~~~~~y~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v 70 (253)
T 3g5l_A 1 MSLKENK---YDDKHFFEQYSQMPRSKE-------GLKAAGEWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKV 70 (253)
T ss_dssp ---------------------------C-------HHHHHHHHHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEE
T ss_pred CCccccc---cccHHHHHHHHHhhcccc-------cccchhhHHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEE
Confidence 6665543 555667766443221100 001113445677778877899999999999999999999987 99
Q ss_pred EEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 80 IALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 80 ~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
+|+|+|+.+++.|+++.. ..+++++++|+.+ +++++++||+|++..+++|+++ ...+++++.++|+|||.+++..
T Consensus 71 ~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~--~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 71 LGIDLSERMLTEAKRKTT-SPVVCYEQKAIED--IAIEPDAYNVVLSSLALHYIAS--FDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEESCHHHHHHHHHHCC-CTTEEEEECCGGG--CCCCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHhhc-cCCeEEEEcchhh--CCCCCCCeEEEEEchhhhhhhh--HHHHHHHHHHHcCCCcEEEEEe
Confidence 999999999999999876 4689999999988 5677899999999999999987 6799999999999999999975
Q ss_pred cc
Q 043471 160 SC 161 (485)
Q Consensus 160 ~~ 161 (485)
..
T Consensus 146 ~~ 147 (253)
T 3g5l_A 146 EH 147 (253)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 34
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.83 E-value=2.7e-20 Score=169.15 Aligned_cols=179 Identities=21% Similarity=0.248 Sum_probs=132.6
Q ss_pred CCCChhHHHHHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhcCcEEE
Q 043471 3 TQSNHGEREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKAGHVIA 81 (485)
Q Consensus 3 ~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~g 81 (485)
|++.....+..+.||+..+..+...- ..........+++.+. ..++.+|||||||+|.++..+++.+.+|+|
T Consensus 1 M~~~~~~~~~~~~~~~~~a~~y~~~~-------~~~~~~~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~ 73 (218)
T 3ou2_A 1 MTTSHGLIESQLSYYRARASEYDATF-------VPYMDSAAPAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTA 73 (218)
T ss_dssp --CCHHHHHHHHHHHHHHGGGHHHHH-------HHHHTTTHHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEE
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEE
Confidence 45556666777899998766554211 0011122445555554 456779999999999999999999999999
Q ss_pred EeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 82 LDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 82 iD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+|+|+.+++.+++. ..++++++++|+.+. +++++||+|+++.+++|++++....+++++.++|+|||.+++.+..
T Consensus 74 ~D~s~~~~~~a~~~--~~~~~~~~~~d~~~~---~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 74 LDGSAEMIAEAGRH--GLDNVEFRQQDLFDW---TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp EESCHHHHHHHGGG--CCTTEEEEECCTTSC---CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCCHHHHHHHHhc--CCCCeEEEecccccC---CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 99999999999982 226899999999874 5788999999999999999876789999999999999999998775
Q ss_pred CCCCCccc-----------c-CCCC------CCCCChhHHHHHhhhccee
Q 043471 162 FHQSGDSK-----------R-KHNP------THYREPRFYSKVFKECQIQ 193 (485)
Q Consensus 162 ~~~~~~~~-----------~-~~~~------~~~~~~~~~~~~~~~~~~~ 193 (485)
........ . .... ..+.+++.+.++++++||.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 198 (218)
T 3ou2_A 149 DHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWS 198 (218)
T ss_dssp CCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEE
T ss_pred CCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCE
Confidence 42111000 0 0011 1234788999999999996
No 35
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.83 E-value=9e-20 Score=167.62 Aligned_cols=150 Identities=22% Similarity=0.312 Sum_probs=122.1
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCC------CeEEEEccCCCCCCCCCCccEEE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKC------SVEFEVADCTKKTYPENSFDVIY 354 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~------~i~~~~~d~~~~~~~~~~fD~i~ 354 (485)
++++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+. ++++..+|+..+++++++||+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 457889999999999999999988 78999999999999999998865433 58999999999998889999999
Q ss_pred EcccccccCCHH---HHHHHHHhcCCCCcEEEEEecccCCCCCChhH--HHHHHh------------------cCCCCCC
Q 043471 355 SRDTILHIQDKP---ALFKSFFKWLKPGGTVLISDYCKSFGTPSVEF--SEYIKQ------------------RGYDLHD 411 (485)
Q Consensus 355 ~~~~~~~~~~~~---~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~--~~~~~~------------------~~~~~~~ 411 (485)
+..+++|++++. .+++++.++|||||++++.++........... ...... .....++
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 999999999888 89999999999999999998765332211100 000000 0123678
Q ss_pred HHHHHHHHHhCCCeEEEEee
Q 043471 412 VKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 412 ~~~~~~~l~~aGf~~~~~~~ 431 (485)
.+++.++|+++||+++.+..
T Consensus 187 ~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp HHHHHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEe
Confidence 99999999999999998764
No 36
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.83 E-value=3.2e-20 Score=175.98 Aligned_cols=160 Identities=20% Similarity=0.206 Sum_probs=126.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCC-CCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKT-YPEN 348 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~-~~~~ 348 (485)
+..+++.+..+ +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ .+++++.+|+.+++ ++++
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 135 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLET 135 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSS
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCC
Confidence 45667776544 679999999999999999988 8899999999999999999886443 57999999999887 6789
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCCh----hHHHHH---------HhcCCCCCCHHHH
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSV----EFSEYI---------KQRGYDLHDVKSY 415 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~~~ 415 (485)
+||+|++..+++|++++..+++++.++|||||++++.++......... .+.... ......+++.+++
T Consensus 136 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 136 PVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred CceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 999999999999999999999999999999999999976532210000 000000 0112256789999
Q ss_pred HHHHHhCCCeEEEEeecc
Q 043471 416 GQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 416 ~~~l~~aGf~~~~~~~~~ 433 (485)
.++|+++||+++.+....
T Consensus 216 ~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 216 YLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHHHHTTCEEEEEEEES
T ss_pred HHHHHHCCCceeeeeeEE
Confidence 999999999999887643
No 37
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.83 E-value=1.1e-20 Score=172.13 Aligned_cols=149 Identities=19% Similarity=0.256 Sum_probs=120.7
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCee
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVD 122 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D 122 (485)
...+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++.. .+++++++|+.+ ++++ ++||
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~d~~~--~~~~-~~fD 108 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP--KEFSITEGDFLS--FEVP-TSID 108 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC--TTCCEESCCSSS--CCCC-SCCS
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC--CceEEEeCChhh--cCCC-CCeE
Confidence 3466666666688899999999999999999999999999999999999999875 589999999998 4555 8999
Q ss_pred EEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc---------------cCCCCCCCCChhHHHHHh
Q 043471 123 MMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK---------------RKHNPTHYREPRFYSKVF 187 (485)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~ 187 (485)
+|+++.+++|++++....+++++.++|||||.+++.++......... ......++.+.+.+..++
T Consensus 109 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 188 (220)
T 3hnr_A 109 TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIF 188 (220)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHH
T ss_pred EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHH
Confidence 99999999999987656699999999999999999876543221110 001112444788999999
Q ss_pred hhcceecCC
Q 043471 188 KECQIQDAS 196 (485)
Q Consensus 188 ~~~~~~~~~ 196 (485)
+++||....
T Consensus 189 ~~aGf~v~~ 197 (220)
T 3hnr_A 189 ENNGFHVTF 197 (220)
T ss_dssp HHTTEEEEE
T ss_pred HHCCCEEEE
Confidence 999996443
No 38
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.82 E-value=6.1e-20 Score=164.89 Aligned_cols=141 Identities=18% Similarity=0.225 Sum_probs=118.7
Q ss_pred CCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcccccccC
Q 043471 284 GQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTILHIQ 363 (485)
Q Consensus 284 ~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~ 363 (485)
+.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++.. +++++++|+.++++++++||+|++..+++|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTHP----SVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHCT----TSEEECCCGGGGGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCC----CCeEEeCcccccccCCCCeEEEEehhhHhcCC
Confidence 779999999999999999988 7899999999999999998843 78999999999888889999999999999996
Q ss_pred --CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeecch
Q 043471 364 --DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDRTE 434 (485)
Q Consensus 364 --~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 434 (485)
++..+++++.++|||||++++.++....... +.. .......++.+++.++|+++||+++.+.....
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEP---MYH--PVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE---ECC--SSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhh---hhc--hhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 8999999999999999999999765543110 000 00122457899999999999999998876543
No 39
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=2.9e-20 Score=173.05 Aligned_cols=158 Identities=23% Similarity=0.266 Sum_probs=123.7
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEE
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVI 353 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i 353 (485)
.+++.+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++.. ..++++..+|+.++++++++||+|
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEEEE
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeEEE
Confidence 455556666889999999999999999998843399999999999999999875 458999999999999888999999
Q ss_pred EEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCC------------CCCC--hhHHHHHH-----------hcCCC
Q 043471 354 YSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSF------------GTPS--VEFSEYIK-----------QRGYD 408 (485)
Q Consensus 354 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~------------~~~~--~~~~~~~~-----------~~~~~ 408 (485)
++..+++|++++..++++++++|||||++++....... .... ..+..+.. .....
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (253)
T 3g5l_A 113 LSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKY 192 (253)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEE
T ss_pred EEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccE
Confidence 99999999999999999999999999999998543210 0000 00000000 00011
Q ss_pred CCCHHHHHHHHHhCCCeEEEEeecc
Q 043471 409 LHDVKSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 409 ~~~~~~~~~~l~~aGf~~~~~~~~~ 433 (485)
..+.+++.++|+++||+++.+.+..
T Consensus 193 ~~t~~~~~~~l~~aGF~~~~~~e~~ 217 (253)
T 3g5l_A 193 HRTVTTYIQTLLKNGFQINSVIEPE 217 (253)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEECCC
T ss_pred ecCHHHHHHHHHHcCCeeeeeecCC
Confidence 2389999999999999999987654
No 40
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.82 E-value=5.5e-20 Score=172.45 Aligned_cols=155 Identities=21% Similarity=0.369 Sum_probs=127.1
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTF 116 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~ 116 (485)
...+....+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....++++++++|+.+ +++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~--~~~ 116 (266)
T 3ujc_A 39 GGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILT--KEF 116 (266)
T ss_dssp THHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT--CCC
T ss_pred chHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc--CCC
Confidence 33455678888888888999999999999999999998 889999999999999999987655789999999988 567
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc------CCCCCCCCChhHHHHHhhhc
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR------KHNPTHYREPRFYSKVFKEC 190 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 190 (485)
++++||+|+++.+++|++.+....+++++.++|+|||.+++.++.......... ........+.+.+...++++
T Consensus 117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 196 (266)
T 3ujc_A 117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTAC 196 (266)
T ss_dssp CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHT
T ss_pred CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHc
Confidence 789999999999999997666889999999999999999998765433111110 01123345788999999999
Q ss_pred ceec
Q 043471 191 QIQD 194 (485)
Q Consensus 191 ~~~~ 194 (485)
||..
T Consensus 197 Gf~~ 200 (266)
T 3ujc_A 197 NFKN 200 (266)
T ss_dssp TCEE
T ss_pred CCeE
Confidence 9854
No 41
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.82 E-value=4.7e-20 Score=171.75 Aligned_cols=157 Identities=21% Similarity=0.277 Sum_probs=127.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
.....+++.+...++.+|||||||+|.++..+++....+|+|+|+|+.+++.|+++.... .++++.++|+.++++++++
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSC
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCC
Confidence 445677888877788999999999999999998875558999999999999999987654 5799999999998888899
Q ss_pred ccEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEE
Q 043471 350 FDVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDI 427 (485)
Q Consensus 350 fD~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 427 (485)
||+|++..+++|++ ++..++++++++|||||++++.+.......... . ...+....+.+++.++|+++||+++
T Consensus 159 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLV--D---KEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEE--E---TTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred eEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccccee--c---ccCCcccCCHHHHHHHHHHCCCEEE
Confidence 99999999999994 588999999999999999999975432211100 0 0111234688999999999999999
Q ss_pred EEeec
Q 043471 428 IAEDR 432 (485)
Q Consensus 428 ~~~~~ 432 (485)
.+...
T Consensus 234 ~~~~~ 238 (254)
T 1xtp_A 234 KEAFQ 238 (254)
T ss_dssp EEEEC
T ss_pred Eeeec
Confidence 87654
No 42
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.82 E-value=9.9e-20 Score=171.77 Aligned_cols=157 Identities=26% Similarity=0.339 Sum_probs=126.6
Q ss_pred HHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCCCCccEEE
Q 043471 277 AKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPENSFDVIY 354 (485)
Q Consensus 277 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~fD~i~ 354 (485)
....+.++.+|||||||+|.++..+++.. +.+++|+|+|+.+++.|++++...+ .++++..+|+.++++++++||+|+
T Consensus 31 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 110 (276)
T 3mgg_A 31 HDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIF 110 (276)
T ss_dssp TTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEE
T ss_pred hcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEE
Confidence 33456788999999999999999999886 6799999999999999999876433 379999999999998889999999
Q ss_pred EcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCC---CCChh----HH---HHHHhcCCCCCCHHHHHHHHHhCCC
Q 043471 355 SRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFG---TPSVE----FS---EYIKQRGYDLHDVKSYGQMLKDAGF 424 (485)
Q Consensus 355 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~----~~---~~~~~~~~~~~~~~~~~~~l~~aGf 424 (485)
+..+++|++++..+++++.++|||||++++.+...... ..... +. ......+....+...+.++|+++||
T Consensus 111 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 190 (276)
T 3mgg_A 111 VCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGF 190 (276)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTC
T ss_pred EechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCC
Confidence 99999999999999999999999999999987544221 11111 11 1112223455677899999999999
Q ss_pred eEEEEeecc
Q 043471 425 VDIIAEDRT 433 (485)
Q Consensus 425 ~~~~~~~~~ 433 (485)
++++++...
T Consensus 191 ~~v~~~~~~ 199 (276)
T 3mgg_A 191 EKIRVEPRM 199 (276)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEeeEE
Confidence 999887554
No 43
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.82 E-value=9.5e-20 Score=167.61 Aligned_cols=153 Identities=25% Similarity=0.312 Sum_probs=126.0
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYP 346 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~ 346 (485)
...+..++.....+++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... ...++++.++|+.+.+ +
T Consensus 53 ~~~l~~~~~~~~~~~~-~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~ 129 (235)
T 3lcc_A 53 TPLIVHLVDTSSLPLG-RALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-P 129 (235)
T ss_dssp CHHHHHHHHTTCSCCE-EEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-C
T ss_pred CHHHHHHHHhcCCCCC-CEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-C
Confidence 3456667777666554 9999999999999999876 78999999999999999999864 2357999999999976 4
Q ss_pred CCCccEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCC
Q 043471 347 ENSFDVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGF 424 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 424 (485)
+++||+|++..+++|++ +...+++++.++|||||++++.++......... ....+.+++.++|+++||
T Consensus 130 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~Gf 199 (235)
T 3lcc_A 130 TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGP----------PYKVDVSTFEEVLVPIGF 199 (235)
T ss_dssp SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCS----------SCCCCHHHHHHHHGGGTE
T ss_pred CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCC----------CccCCHHHHHHHHHHcCC
Confidence 56999999999999998 899999999999999999999876554321111 123678999999999999
Q ss_pred eEEEEeecch
Q 043471 425 VDIIAEDRTE 434 (485)
Q Consensus 425 ~~~~~~~~~~ 434 (485)
+++.++....
T Consensus 200 ~~~~~~~~~~ 209 (235)
T 3lcc_A 200 KAVSVEENPH 209 (235)
T ss_dssp EEEEEEECTT
T ss_pred eEEEEEecCC
Confidence 9998876553
No 44
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.82 E-value=1.5e-19 Score=171.18 Aligned_cols=158 Identities=18% Similarity=0.244 Sum_probs=126.9
Q ss_pred HHHHHHHc-CCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCC
Q 043471 272 TKEFVAKL-DLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 272 ~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~ 348 (485)
...+++.+ .+.++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++....+.++++.++|+.+++++ +
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~ 88 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-D 88 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-S
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-C
Confidence 44455554 56778899999999999999999886 47999999999999999999876666899999999998874 6
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEeccc-----C---CCC------CChhHHHH----HHhcCCCCC
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCK-----S---FGT------PSVEFSEY----IKQRGYDLH 410 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-----~---~~~------~~~~~~~~----~~~~~~~~~ 410 (485)
+||+|++..+++|++++..++++++++|||||++++.++.. . ... ....+... ....+....
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (284)
T 3gu3_A 89 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGN 168 (284)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTT
T ss_pred CeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhccccc
Confidence 99999999999999999999999999999999999998761 1 000 01112221 223344566
Q ss_pred CHHHHHHHHHhCCCeEEEEe
Q 043471 411 DVKSYGQMLKDAGFVDIIAE 430 (485)
Q Consensus 411 ~~~~~~~~l~~aGf~~~~~~ 430 (485)
+...+.++|+++||+.+.+.
T Consensus 169 ~~~~l~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 169 IGMKIPIYLSELGVKNIECR 188 (284)
T ss_dssp GGGTHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEE
Confidence 77889999999999998773
No 45
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.82 E-value=2.3e-20 Score=173.54 Aligned_cols=141 Identities=16% Similarity=0.252 Sum_probs=110.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhh----cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKK----AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
.+++.+|||||||+|..+..|+++ +.+|+|+|+|+.|++.|+++... ..+++++++|+.+ +++ ++||+|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~--~~~--~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD--IAI--ENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT--CCC--CSEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc--ccc--cccccc
Confidence 457889999999999999999986 56899999999999999997543 2479999999988 443 569999
Q ss_pred EhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc------------CC--------------CCCCCC
Q 043471 125 FSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR------------KH--------------NPTHYR 178 (485)
Q Consensus 125 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------------~~--------------~~~~~~ 178 (485)
+++.+++|++++++..++++++++|||||.+++++........... .. ......
T Consensus 144 ~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 144 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 9999999999877889999999999999999998765433211100 00 001223
Q ss_pred ChhHHHHHhhhcceecCC
Q 043471 179 EPRFYSKVFKECQIQDAS 196 (485)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~ 196 (485)
+.+.+...|+++||..++
T Consensus 224 s~~~~~~~L~~AGF~~ve 241 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSE 241 (261)
T ss_dssp CHHHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHcCCCeEE
Confidence 567788889999996543
No 46
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.82 E-value=4.8e-20 Score=170.35 Aligned_cols=177 Identities=16% Similarity=0.197 Sum_probs=118.3
Q ss_pred HHHHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHH
Q 043471 10 REIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVI 89 (485)
Q Consensus 10 ~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~ 89 (485)
.+..+.||+..+..+....... ............+.+.++ ++.+|||||||+|.++..+++.+.+|+|+|+|+.++
T Consensus 13 ~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~ 88 (242)
T 3l8d_A 13 HESAEKKWDSSAEFWNQNSQEM--WDSGSRSTIIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMI 88 (242)
T ss_dssp -------------------CHH--HHTSTTTTHHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHH
T ss_pred HHHHHHHHHhHHHHhhhhhhhc--cCcccHHHHHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHH
Confidence 3456788988666544211100 001112223334444443 578999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc
Q 043471 90 KKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK 169 (485)
Q Consensus 90 ~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 169 (485)
+.++++.. ..+++++++|+.+ +++++++||+|++..+++|+++ ...+++++.++|+|||.+++.+..........
T Consensus 89 ~~a~~~~~-~~~~~~~~~d~~~--~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~ 163 (242)
T 3l8d_A 89 QKGKERGE-GPDLSFIKGDLSS--LPFENEQFEAIMAINSLEWTEE--PLRALNEIKRVLKSDGYACIAILGPTAKPREN 163 (242)
T ss_dssp HHHHTTTC-BTTEEEEECBTTB--CSSCTTCEEEEEEESCTTSSSC--HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGG
T ss_pred HHHHhhcc-cCCceEEEcchhc--CCCCCCCccEEEEcChHhhccC--HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhh
Confidence 99998753 3689999999988 5667899999999999999987 56999999999999999999876543221111
Q ss_pred ------cCCCCCCCCChhHHHHHhhhcceecC
Q 043471 170 ------RKHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
.........++..+..+++++||...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 195 (242)
T 3l8d_A 164 SYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVV 195 (242)
T ss_dssp GGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEE
T ss_pred hhhhhccccccccCCCHHHHHHHHHHcCCEEE
Confidence 11222334577889999999999654
No 47
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.81 E-value=1.6e-19 Score=164.04 Aligned_cols=156 Identities=21% Similarity=0.216 Sum_probs=119.4
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCc
Q 043471 272 TKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSF 350 (485)
Q Consensus 272 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~f 350 (485)
...+++.+. +.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++ .+. .++++..+|+.++ +++++|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~--~~~-~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR--HGL-DNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG--GCC-TTEEEEECCTTSC-CCSSCE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh--cCC-CCeEEEecccccC-CCCCce
Confidence 334555553 667789999999999999999988 7899999999999999988 222 4799999999988 678999
Q ss_pred cEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHh-------cC------CCCCCHHHH
Q 043471 351 DVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQ-------RG------YDLHDVKSY 415 (485)
Q Consensus 351 D~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~ 415 (485)
|+|++..+++|+++. ..+++++.++|||||.+++.++..........+.....+ .+ ..+++.+++
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAEL 188 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHH
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHH
Confidence 999999999999875 899999999999999999998766322211111100000 00 235689999
Q ss_pred HHHHHhCCCeEEEEeec
Q 043471 416 GQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 416 ~~~l~~aGf~~~~~~~~ 432 (485)
.++|+++||++...+..
T Consensus 189 ~~~l~~aGf~v~~~~~~ 205 (218)
T 3ou2_A 189 TERLTALGWSCSVDEVH 205 (218)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHCCCEEEeeecc
Confidence 99999999997655543
No 48
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.81 E-value=7.4e-20 Score=169.77 Aligned_cols=169 Identities=12% Similarity=0.152 Sum_probs=116.0
Q ss_pred HHHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHH
Q 043471 11 EIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVI 89 (485)
Q Consensus 11 ~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~ 89 (485)
..++.||+.....+.... ......+.+++.+. ..++.+|||||||+|.++..+++.+.+|+|+|+|+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~ 77 (250)
T 2p7i_A 7 NYDQEIKDTAGHKYAYNF---------DFDVMHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAI 77 (250)
T ss_dssp ----------------CH---------HHHTHHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHH
T ss_pred CCCHHHHhhHHHHhcCcc---------chhhHHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHH
Confidence 345678998666553211 01122233444433 24677999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHH-hhcccCcEEEEEeccCCCCCc-
Q 043471 90 KKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMV-KWLKVGGYIFFRESCFHQSGD- 167 (485)
Q Consensus 90 ~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~-~~L~pgG~l~~~~~~~~~~~~- 167 (485)
+.|+++... +++++++|+.+. +++++||+|++..+++|+++ ...+++++. ++|||||++++.+++......
T Consensus 78 ~~a~~~~~~--~v~~~~~d~~~~---~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~ 150 (250)
T 2p7i_A 78 SHAQGRLKD--GITYIHSRFEDA---QLPRRYDNIVLTHVLEHIDD--PVALLKRINDDWLAEGGRLFLVCPNANAVSRQ 150 (250)
T ss_dssp HHHHHHSCS--CEEEEESCGGGC---CCSSCEEEEEEESCGGGCSS--HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHH
T ss_pred HHHHHhhhC--CeEEEEccHHHc---CcCCcccEEEEhhHHHhhcC--HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHH
Confidence 999998754 899999999874 36789999999999999988 569999999 999999999998865432100
Q ss_pred -------ccc---------CCCCCCCCChhHHHHHhhhcceecC
Q 043471 168 -------SKR---------KHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 168 -------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
... ........+.+.+.++++++||...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 194 (250)
T 2p7i_A 151 IAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVT 194 (250)
T ss_dssp HHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEE
T ss_pred HHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEE
Confidence 000 1112234478899999999998553
No 49
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.81 E-value=6.8e-20 Score=169.29 Aligned_cols=181 Identities=19% Similarity=0.310 Sum_probs=128.9
Q ss_pred HHHHHHHHhhhcCcCcchhhhhcCCC-cCccChhhh----HHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhc-CcEEE
Q 043471 9 EREIQKNYWMEHSANLTVEAMMLDSK-ASDLDKEER----PEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKA-GHVIA 81 (485)
Q Consensus 9 ~~~~~~~yw~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~g 81 (485)
..+..+.||+..+..+. .++.... ......... +.++..+. ..++.+|||||||+|.++..|++.+ .+|+|
T Consensus 30 ~~~~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~ 107 (241)
T 2ex4_A 30 FYSKAKTYWKQIPPTVD--GMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDM 107 (241)
T ss_dssp HHHHHHHHHHTSCSSHH--HHTTTCGGGHHHHHHHHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTTCSEEEE
T ss_pred hHHHHHHHHhcCCcccc--ccccCCCCcchhhHHhHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 44556899998766432 2221100 000111112 23333332 2357899999999999999998884 59999
Q ss_pred EeCChHHHHHHHHHcCCC--CCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 82 LDFIDSVIKKNEEVNGHF--ENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 82 iD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
+|+|+.+++.|+++.... .+++++++|+.+ +++++++||+|++..+++|++++....+++++.++|+|||++++.+
T Consensus 108 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 108 VDITEDFLVQAKTYLGEEGKRVRNYFCCGLQD--FTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp EESCHHHHHHHHHHTGGGGGGEEEEEECCGGG--CCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHhhhcCCceEEEEEcChhh--cCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 999999999999986542 368999999987 5566779999999999999998777899999999999999999987
Q ss_pred ccCCCCCccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 160 SCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
+.... .............+.+.+.++++++||..
T Consensus 186 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 219 (241)
T 2ex4_A 186 NMAQE-GVILDDVDSSVCRDLDVVRRIICSAGLSL 219 (241)
T ss_dssp EEBSS-SEEEETTTTEEEEBHHHHHHHHHHTTCCE
T ss_pred ccCCC-cceecccCCcccCCHHHHHHHHHHcCCeE
Confidence 76543 11111222333347889999999999854
No 50
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.81 E-value=7.6e-20 Score=171.00 Aligned_cols=157 Identities=12% Similarity=0.231 Sum_probs=122.1
Q ss_pred CcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccC
Q 043471 34 KASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTS 111 (485)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~ 111 (485)
.....+......+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.|+++.. ..++++++++|+.+
T Consensus 17 s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~ 96 (260)
T 1vl5_A 17 SQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ 96 (260)
T ss_dssp ------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C
T ss_pred CccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh
Confidence 3344555677788888888889999999999999999999998899999999999999998753 22479999999988
Q ss_pred CCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc---------cCCCCCCCCChhH
Q 043471 112 PDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK---------RKHNPTHYREPRF 182 (485)
Q Consensus 112 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 182 (485)
+++++++||+|+++.+++|+++ ...+++++.++|||||++++.+.......... .........+.+.
T Consensus 97 --l~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (260)
T 1vl5_A 97 --MPFTDERFHIVTCRIAAHHFPN--PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSD 172 (260)
T ss_dssp --CCSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHH
T ss_pred --CCCCCCCEEEEEEhhhhHhcCC--HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHH
Confidence 6678899999999999999998 56999999999999999999765432221000 0111233447788
Q ss_pred HHHHhhhcceec
Q 043471 183 YSKVFKECQIQD 194 (485)
Q Consensus 183 ~~~~~~~~~~~~ 194 (485)
+.++++++||..
T Consensus 173 ~~~~l~~aGf~~ 184 (260)
T 1vl5_A 173 WLKMLEEAGFEL 184 (260)
T ss_dssp HHHHHHHHTCEE
T ss_pred HHHHHHHCCCeE
Confidence 999999999854
No 51
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.81 E-value=3.1e-19 Score=164.95 Aligned_cols=158 Identities=25% Similarity=0.372 Sum_probs=124.3
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCC-EEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccE
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDV-HVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDV 352 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 352 (485)
.+.+.+...++.+|||||||+|.++..+++. +. +++|+|+|+.+++.|+++... .++++..+|+.++++++++||+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhccCCCCCceE
Confidence 4556666678889999999999999999987 66 999999999999999988653 3799999999998888889999
Q ss_pred EEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCC---CCCCh----------hH----------HHHHH-hcCCC
Q 043471 353 IYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSF---GTPSV----------EF----------SEYIK-QRGYD 408 (485)
Q Consensus 353 i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---~~~~~----------~~----------~~~~~-~~~~~ 408 (485)
|++..+++|++++..++++++++|||||++++....... ..... .. ..+.. .....
T Consensus 111 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (243)
T 3bkw_A 111 AYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKH 190 (243)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEE
T ss_pred EEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEE
Confidence 999999999999999999999999999999998643210 00000 00 00011 11123
Q ss_pred CCCHHHHHHHHHhCCCeEEEEeecch
Q 043471 409 LHDVKSYGQMLKDAGFVDIIAEDRTE 434 (485)
Q Consensus 409 ~~~~~~~~~~l~~aGf~~~~~~~~~~ 434 (485)
.++.+++.++|+++||+++.+.....
T Consensus 191 ~~t~~~~~~~l~~aGF~~~~~~~~~~ 216 (243)
T 3bkw_A 191 HRTVGTTLNALIRSGFAIEHVEEFCP 216 (243)
T ss_dssp ECCHHHHHHHHHHTTCEEEEEEECCC
T ss_pred eccHHHHHHHHHHcCCEeeeeccCCC
Confidence 35899999999999999998876543
No 52
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.81 E-value=1.1e-19 Score=164.18 Aligned_cols=166 Identities=14% Similarity=0.193 Sum_probs=127.0
Q ss_pred HHHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHH
Q 043471 11 EIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIK 90 (485)
Q Consensus 11 ~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~ 90 (485)
...+.||+.....+. ..... ......++..++ ++.+|||||||+|.++..+++.+.+|+|+|+|+.+++
T Consensus 11 ~~~~~~~~~~~~~y~-------~~~~~--~~~~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~ 79 (211)
T 3e23_A 11 DDTLRFYRGNATAYA-------ERQPR--SATLTKFLGELP--AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAA 79 (211)
T ss_dssp HHHHHHHHHSHHHHT-------TCCCC--CHHHHHHHTTSC--TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHHh-------hccch--hHHHHHHHHhcC--CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHH
Confidence 456778887554332 11111 344555555544 5789999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc
Q 043471 91 KNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR 170 (485)
Q Consensus 91 ~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 170 (485)
.++++. +++++++|+.. ++ ++++||+|+++.+++|++.+....+++++.++|+|||++++.......... ..
T Consensus 80 ~a~~~~----~~~~~~~d~~~--~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~ 151 (211)
T 3e23_A 80 EASRRL----GRPVRTMLFHQ--LD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR-DK 151 (211)
T ss_dssp HHHHHH----TSCCEECCGGG--CC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE-CT
T ss_pred HHHHhc----CCceEEeeecc--CC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc-cc
Confidence 999986 57889999988 44 678999999999999999666889999999999999999998654332211 11
Q ss_pred CCCCCCCCChhHHHHHhhhcc-eecC
Q 043471 171 KHNPTHYREPRFYSKVFKECQ-IQDA 195 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~-~~~~ 195 (485)
......+.+.+.+.++++++| |...
T Consensus 152 ~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 152 LARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp TSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred cchhccCCCHHHHHHHHHhCCCcEEE
Confidence 122234458899999999999 8543
No 53
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.81 E-value=2.3e-19 Score=162.21 Aligned_cols=148 Identities=21% Similarity=0.309 Sum_probs=120.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
..+..++.. ++++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++. ++.+..+|+..++ ++++
T Consensus 32 ~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~-~~~~ 102 (211)
T 3e23_A 32 ATLTKFLGE--LPAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD-AIDA 102 (211)
T ss_dssp HHHHHHHTT--SCTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC-CCSC
T ss_pred HHHHHHHHh--cCCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC-CCCc
Confidence 344455554 356789999999999999999988 789999999999999999987 5778889999888 6789
Q ss_pred ccEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCC-CeE
Q 043471 350 FDVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAG-FVD 426 (485)
Q Consensus 350 fD~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~ 426 (485)
||+|++..+++|++ ++..++++++++|||||++++............ ......+++.+++.++|+++| |++
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~aG~f~~ 176 (211)
T 3e23_A 103 YDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDK------LARYYNYPSEEWLRARYAEAGTWAS 176 (211)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECT------TSCEECCCCHHHHHHHHHHHCCCSE
T ss_pred EEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccc------cchhccCCCHHHHHHHHHhCCCcEE
Confidence 99999999999998 888999999999999999999865443221100 011235679999999999999 999
Q ss_pred EEEeec
Q 043471 427 IIAEDR 432 (485)
Q Consensus 427 ~~~~~~ 432 (485)
+.+...
T Consensus 177 ~~~~~~ 182 (211)
T 3e23_A 177 VAVESS 182 (211)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 987654
No 54
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.81 E-value=2.6e-19 Score=171.41 Aligned_cols=153 Identities=24% Similarity=0.336 Sum_probs=121.2
Q ss_pred CCCCCCEEEEECCCCChhHHHHh-hc-CCCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCCCCCCCccEEEE
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMA-DK-FDVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKTYPENSFDVIYS 355 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~-~~-~~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~fD~i~~ 355 (485)
.++++.+|||||||+|.++..++ .. .+.+|+|+|+|+.+++.|+++....+ .+++++++|+.+++++ ++||+|++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEE
Confidence 46778899999999999999985 22 26799999999999999999987443 4599999999999887 99999999
Q ss_pred cccccccCCHHH---HHHHHHhcCCCCcEEEEEecccCCCCCCh-------------hHHHHHHhc----C-CCCCCHHH
Q 043471 356 RDTILHIQDKPA---LFKSFFKWLKPGGTVLISDYCKSFGTPSV-------------EFSEYIKQR----G-YDLHDVKS 414 (485)
Q Consensus 356 ~~~~~~~~~~~~---~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-------------~~~~~~~~~----~-~~~~~~~~ 414 (485)
+.+++|++++.. ++++++++|||||++++.++......... ....+.... + ..+++.++
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 999999988776 79999999999999999986653321100 011111111 1 14578999
Q ss_pred HHHHHHhCCCeEEEEeecc
Q 043471 415 YGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 415 ~~~~l~~aGf~~~~~~~~~ 433 (485)
+.++|+++||+++.+....
T Consensus 274 ~~~~l~~aGF~~v~~~~~~ 292 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDDR 292 (305)
T ss_dssp HHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHCCCEEEEEEccc
Confidence 9999999999999887543
No 55
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.81 E-value=3.3e-19 Score=175.87 Aligned_cols=151 Identities=23% Similarity=0.311 Sum_probs=122.6
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc-------C-C-CCCeEEEEccCCCC------
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI-------G-L-KCSVEFEVADCTKK------ 343 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~-------~-~-~~~i~~~~~d~~~~------ 343 (485)
..++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|++++. + . ..+++++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4578899999999999999999875 5699999999999999998864 2 2 15899999999987
Q ss_pred CCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHH--HHHHhcCCCCCCHHHHHHHHHh
Q 043471 344 TYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFS--EYIKQRGYDLHDVKSYGQMLKD 421 (485)
Q Consensus 344 ~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~ 421 (485)
++++++||+|+++.+++|++++..++++++++|||||++++.++............ ..........++.+++.++|++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999987655433322111 1112222345788999999999
Q ss_pred CCCeEEEEee
Q 043471 422 AGFVDIIAED 431 (485)
Q Consensus 422 aGf~~~~~~~ 431 (485)
+||+++++..
T Consensus 241 aGF~~v~~~~ 250 (383)
T 4fsd_A 241 AGFRDVRLVS 250 (383)
T ss_dssp TTCCCEEEEE
T ss_pred CCCceEEEEe
Confidence 9999876544
No 56
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.80 E-value=1.2e-19 Score=158.19 Aligned_cols=142 Identities=23% Similarity=0.223 Sum_probs=119.4
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEE
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVI 353 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i 353 (485)
.+++.+.+.++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.++++. .++++..+| .++++++||+|
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~----~~v~~~~~d---~~~~~~~~D~v 79 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEKF----DSVITLSDP---KEIPDNSVDFI 79 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHHC----TTSEEESSG---GGSCTTCEEEE
T ss_pred HHHHhcCcCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHhC----CCcEEEeCC---CCCCCCceEEE
Confidence 45556667788899999999999999999885 49999999999999999982 378999998 56778899999
Q ss_pred EEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeecc
Q 043471 354 YSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 354 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 433 (485)
++..+++|++++..+++++.++|||||++++.++.......... ....++.+++.++++ ||+++......
T Consensus 80 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~--Gf~~~~~~~~~ 149 (170)
T 3i9f_A 80 LFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPP--------LSIRMDEKDYMGWFS--NFVVEKRFNPT 149 (170)
T ss_dssp EEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSC--------GGGCCCHHHHHHHTT--TEEEEEEECSS
T ss_pred EEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCch--------HhhhcCHHHHHHHHh--CcEEEEccCCC
Confidence 99999999999999999999999999999999876554322211 123468999999999 99999887655
No 57
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.80 E-value=3e-19 Score=163.47 Aligned_cols=162 Identities=18% Similarity=0.257 Sum_probs=126.1
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCC--CCCCCCCcc
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTK--KTYPENSFD 351 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~--~~~~~~~fD 351 (485)
.+++.+. .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .++..+|+.+ .++++++||
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEE
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccC
Confidence 4555554 67889999999999999999988 789999999999999998764 3688899876 567778999
Q ss_pred EEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHH------------HhcCCCCCCHHHHHHHH
Q 043471 352 VIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYI------------KQRGYDLHDVKSYGQML 419 (485)
Q Consensus 352 ~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l 419 (485)
+|++..+++|++++..+++++.++|+|||++++..+..... ....... .+.+...++.+++.+++
T Consensus 96 ~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (230)
T 3cc8_A 96 CVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI---SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMF 172 (230)
T ss_dssp EEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH---HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHH
T ss_pred EEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH---HHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHH
Confidence 99999999999999999999999999999999987543211 0011111 11123567899999999
Q ss_pred HhCCCeEEEEeecchHHHHHHHHHHHHH
Q 043471 420 KDAGFVDIIAEDRTEQFVQVLQRELDAI 447 (485)
Q Consensus 420 ~~aGf~~~~~~~~~~~~~~~~~~~~~~~ 447 (485)
+++||+++.+......+ .....|...+
T Consensus 173 ~~~Gf~~~~~~~~~~~~-~~~~~~~~~l 199 (230)
T 3cc8_A 173 LKAGYSISKVDRVYVDH-KMYEPLIEEL 199 (230)
T ss_dssp HHTTEEEEEEEEEECCC-GGGHHHHHHH
T ss_pred HHcCCeEEEEEecccCh-hhccchHHHH
Confidence 99999999887766544 3444454444
No 58
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.80 E-value=1.5e-19 Score=166.89 Aligned_cols=144 Identities=20% Similarity=0.213 Sum_probs=117.9
Q ss_pred CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCC-CCCeEEEEccCCCCCCCCCCccEEEEcccccc
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGL-KCSVEFEVADCTKKTYPENSFDVIYSRDTILH 361 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~-~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 361 (485)
++.+|||||||+|.++..+++....+|+|+|+|+.+++.|+++.... ..++++..+|+.++++++++||+|++..+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 57899999999999999999886569999999999999999987643 34688999999988887789999999999999
Q ss_pred cCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeec
Q 043471 362 IQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 362 ~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 432 (485)
+++. ..+++++.++|||||++++.+...... ..+.. ..+....+.+++.++|+++||+++.....
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG---VILDD---VDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS---EEEET---TTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc---ceecc---cCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 9874 489999999999999999987655431 00100 01112347899999999999999988654
No 59
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.80 E-value=1.8e-19 Score=169.09 Aligned_cols=153 Identities=19% Similarity=0.257 Sum_probs=120.5
Q ss_pred ccChhhhHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhc-CcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccC
Q 043471 37 DLDKEERPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKA-GHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTS 111 (485)
Q Consensus 37 ~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~ 111 (485)
....+....+++.+. ..++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|+++... .++++++++|+.+
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp SCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh
Confidence 345566677787776 6678999999999999999999985 4999999999999999987532 2469999999988
Q ss_pred CCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc------CCCCCCCCChhHHHH
Q 043471 112 PDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR------KHNPTHYREPRFYSK 185 (485)
Q Consensus 112 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 185 (485)
+++++++||+|+++.+++|+ + ...+++++.++|+|||++++.++.......... ... ..+.+.+.+.+
T Consensus 108 --~~~~~~~fD~i~~~~~~~~~-~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 181 (267)
T 3kkz_A 108 --LPFRNEELDLIWSEGAIYNI-G--FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAY-PEIDTIPNQVA 181 (267)
T ss_dssp --CCCCTTCEEEEEESSCGGGT-C--HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHC-TTCEEHHHHHH
T ss_pred --CCCCCCCEEEEEEcCCceec-C--HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhC-CCCCCHHHHHH
Confidence 56678999999999999999 4 568999999999999999998876432211110 011 13346778899
Q ss_pred HhhhcceecC
Q 043471 186 VFKECQIQDA 195 (485)
Q Consensus 186 ~~~~~~~~~~ 195 (485)
.++++||...
T Consensus 182 ~l~~aGf~~v 191 (267)
T 3kkz_A 182 KIHKAGYLPV 191 (267)
T ss_dssp HHHHTTEEEE
T ss_pred HHHHCCCEEE
Confidence 9999999653
No 60
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.80 E-value=6.1e-19 Score=162.21 Aligned_cols=144 Identities=17% Similarity=0.160 Sum_probs=115.8
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCCCCCC
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~ 118 (485)
....++..+...+ .+|||||||+|.++..|++.+.+|+|+|+|+.+++.|+++.... .+++++++|+.+++ ++
T Consensus 55 ~l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~ 130 (235)
T 3lcc_A 55 LIVHLVDTSSLPL-GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR---PT 130 (235)
T ss_dssp HHHHHHHTTCSCC-EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC---CS
T ss_pred HHHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC---CC
Confidence 3344455444433 59999999999999999999999999999999999999987642 36999999998843 45
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
++||+|+++.+++|++++....+++++.++|+|||++++.+...... ...+.+..+.+.+...++++||..
T Consensus 131 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH-----VGGPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC-----CSCSSCCCCHHHHHHHHGGGTEEE
T ss_pred CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc-----CCCCCccCCHHHHHHHHHHcCCeE
Confidence 69999999999999996668899999999999999999976654321 112333357889999999999954
No 61
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.80 E-value=1.3e-19 Score=167.91 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=95.9
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~ 117 (485)
.+.+..+.+.+..+ .+.+|||||||+|..+..|++.+.+|+|+|+|+.|++.|++. ++++++++|+++ ++++
T Consensus 25 yp~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~----~~v~~~~~~~e~--~~~~ 96 (257)
T 4hg2_A 25 YPRALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRH----PRVTYAVAPAED--TGLP 96 (257)
T ss_dssp CCHHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCC----TTEEEEECCTTC--CCCC
T ss_pred cHHHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhc----CCceeehhhhhh--hccc
Confidence 44555555555543 356899999999999999999999999999999999877653 689999999998 6788
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+++||+|+|..++||++. ++++++++|+|||||.|++....
T Consensus 97 ~~sfD~v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp SSCEEEEEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcccEEEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEECC
Confidence 999999999999998863 47999999999999999987654
No 62
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.80 E-value=1.9e-19 Score=167.80 Aligned_cols=156 Identities=14% Similarity=0.184 Sum_probs=124.6
Q ss_pred cCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeecc
Q 043471 35 ASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVT 110 (485)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~ 110 (485)
...........+++.+...++.+|||||||+|..+..+++. +.+|+|+|+|+.+++.|+++... .++++++++|+.
T Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 17 HNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA 96 (256)
T ss_dssp SSSCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT
T ss_pred cCCCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH
Confidence 34456677788888888888999999999999999999987 78999999999999999987532 247999999998
Q ss_pred CCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc---c---CCCCCCCCChhHHH
Q 043471 111 SPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK---R---KHNPTHYREPRFYS 184 (485)
Q Consensus 111 ~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~ 184 (485)
+ +++ +++||+|+|..+++|+++ ...+++++.++|||||.+++.++......... . ......+.+.+.+.
T Consensus 97 ~--~~~-~~~fD~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (256)
T 1nkv_A 97 G--YVA-NEKCDVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLV 171 (256)
T ss_dssp T--CCC-SSCEEEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHH
T ss_pred h--CCc-CCCCCEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHH
Confidence 8 555 789999999999999987 56999999999999999999876543221111 0 01112344778899
Q ss_pred HHhhhcceecC
Q 043471 185 KVFKECQIQDA 195 (485)
Q Consensus 185 ~~~~~~~~~~~ 195 (485)
..++++||...
T Consensus 172 ~~l~~aGf~~~ 182 (256)
T 1nkv_A 172 GAFDDLGYDVV 182 (256)
T ss_dssp HHHHTTTBCCC
T ss_pred HHHHHCCCeeE
Confidence 99999999553
No 63
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.80 E-value=3.4e-19 Score=169.95 Aligned_cols=149 Identities=19% Similarity=0.223 Sum_probs=119.6
Q ss_pred hhHHHhccC----CCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCC
Q 043471 42 ERPEVLSLL----PPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPD 113 (485)
Q Consensus 42 ~~~~~~~~~----~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~ 113 (485)
....+++.+ ...++.+|||||||+|..+..+++. +.+|+|+|+|+.+++.|+++.. ..++++++++|+.+
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-- 143 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE-- 143 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS--
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc--
Confidence 345677777 6678899999999999999999987 8899999999999999988752 23579999999988
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc------cCCCCCCCCChhHHHHHh
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK------RKHNPTHYREPRFYSKVF 187 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 187 (485)
+++++++||+|++..+++|+++ ...+++++.++|||||.+++.++......... .........+.+.+...+
T Consensus 144 ~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (297)
T 2o57_A 144 IPCEDNSYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLA 221 (297)
T ss_dssp CSSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHH
T ss_pred CCCCCCCEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 6678899999999999999998 67999999999999999999877543221110 011122344778899999
Q ss_pred hhcceec
Q 043471 188 KECQIQD 194 (485)
Q Consensus 188 ~~~~~~~ 194 (485)
+++||..
T Consensus 222 ~~aGf~~ 228 (297)
T 2o57_A 222 KECGLVT 228 (297)
T ss_dssp HHTTEEE
T ss_pred HHCCCeE
Confidence 9999854
No 64
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.79 E-value=7.2e-19 Score=159.62 Aligned_cols=159 Identities=14% Similarity=0.169 Sum_probs=116.7
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC-CEEEEEeCCHHHHHHHHHHhcCCC------CCeEEEEccCCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD-VHVVGIDLSINMISFALERAIGLK------CSVEFEVADCTKK 343 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~------~~i~~~~~d~~~~ 343 (485)
....+++.+...++.+|||+|||+|.++..+++..+ .+++|+|+|+.+++.|++++...+ .++++.++|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 17 RMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 344555555556778999999999999999998753 699999999999999999976332 1799999999877
Q ss_pred CCCCCCccEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCC-CCChhHHHHHHhcCCCCCCHHHHH----
Q 043471 344 TYPENSFDVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFG-TPSVEFSEYIKQRGYDLHDVKSYG---- 416 (485)
Q Consensus 344 ~~~~~~fD~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---- 416 (485)
+.++++||+|++..+++|+++. ..+++++.++|||||.++++....... .............+...++.+++.
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWAN 176 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHH
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHH
Confidence 7777899999999999999855 899999999999999777764321100 000000001111222346788888
Q ss_pred HHHHhCCCeEEEE
Q 043471 417 QMLKDAGFVDIIA 429 (485)
Q Consensus 417 ~~l~~aGf~~~~~ 429 (485)
++++++||++...
T Consensus 177 ~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 177 KITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHSSEEEEEC
T ss_pred HHHHHcCceEEEE
Confidence 8999999987543
No 65
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.79 E-value=1.3e-18 Score=158.23 Aligned_cols=158 Identities=15% Similarity=0.159 Sum_probs=116.5
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC-CEEEEEeCCHHHHHHHHHHhcCC--C----CCeEEEEccCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD-VHVVGIDLSINMISFALERAIGL--K----CSVEFEVADCTKKT 344 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~--~----~~i~~~~~d~~~~~ 344 (485)
...+++.+...++.+|||||||+|.++..+++... .+++|+|+|+.+++.|++++... . .++++..+|+...+
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 18 LGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 34455555556778999999999999999998753 69999999999999999987532 2 17999999998887
Q ss_pred CCCCCccEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCC-ChhHHHHHHhcCCCCCCHHHHH----H
Q 043471 345 YPENSFDVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTP-SVEFSEYIKQRGYDLHDVKSYG----Q 417 (485)
Q Consensus 345 ~~~~~fD~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~ 417 (485)
+++++||+|++..+++|+++. ..+++++.++|||||.++++......... ...........+...++.+++. +
T Consensus 98 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVK 177 (219)
T ss_dssp GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHH
T ss_pred cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHH
Confidence 777899999999999999855 79999999999999966665432211110 0011111112233446888888 8
Q ss_pred HHHhCCCeEEEE
Q 043471 418 MLKDAGFVDIIA 429 (485)
Q Consensus 418 ~l~~aGf~~~~~ 429 (485)
+++++||++...
T Consensus 178 l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 178 VAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHTEEEEEE
T ss_pred HHHHCCcEEEEE
Confidence 899999977544
No 66
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.79 E-value=5.4e-19 Score=160.65 Aligned_cols=147 Identities=20% Similarity=0.291 Sum_probs=120.4
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc---CcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA---GHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~ 117 (485)
...+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++... .++++++++|+.+ ++++
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~ 103 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENK--IPLP 103 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTB--CSSC
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccccc--CCCC
Confidence 3567777788889999999999999999999986 6999999999999999987532 2479999999988 5567
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceecCC
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDAS 196 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (485)
+++||+|+++.+++|+++ ...+++++.++|+|||.+++.++...... .........+.+.+...++++||....
T Consensus 104 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSE--PLKFLEELKRVAKPFAYLAIIDWKKEERD---KGPPPEEVYSEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp SSCEEEEEEESCGGGCSS--HHHHHHHHHHHEEEEEEEEEEEECSSCCS---SSCCGGGSCCHHHHHHHHHHTTCEEEE
T ss_pred CCCeeEEEeehhhhhcCC--HHHHHHHHHHHhCCCeEEEEEEecccccc---cCCchhcccCHHHHHHHHHHCCCEEEE
Confidence 889999999999999987 66999999999999999999876654331 111122334788999999999996533
No 67
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.79 E-value=7.8e-20 Score=168.76 Aligned_cols=147 Identities=14% Similarity=0.148 Sum_probs=115.6
Q ss_pred hHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCe
Q 043471 43 RPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 43 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
...+...++ ..++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++ ++++++|+.+...++++++|
T Consensus 29 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~d~~~~~~~~~~~~f 102 (240)
T 3dli_A 29 KARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK------FNVVKSDAIEYLKSLPDKYL 102 (240)
T ss_dssp HHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT------SEEECSCHHHHHHTSCTTCB
T ss_pred HHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh------cceeeccHHHHhhhcCCCCe
Confidence 334444444 34578999999999999999999999999999999999999885 78999998773225678999
Q ss_pred eEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc---cCCCCCCCCChhHHHHHhhhcceecC
Q 043471 122 DMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK---RKHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 122 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
|+|+++.+++|++++....+++++.++|||||++++..+......... .........+.+.+..+++++||...
T Consensus 103 D~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 103 DGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp SEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred eEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 999999999999976678999999999999999999877643211100 01122334477899999999999643
No 68
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.79 E-value=3e-19 Score=170.43 Aligned_cols=162 Identities=20% Similarity=0.274 Sum_probs=124.3
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC----CCeEEEEccCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK----CSVEFEVADCTKKT 344 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~----~~i~~~~~d~~~~~ 344 (485)
......+++.+...++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .+++++++|+.+++
T Consensus 69 ~~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 69 TSEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred cHHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 3556677777765544 9999999999999999988 7899999999999999999987654 58999999999988
Q ss_pred CCCCCccEEEEc-ccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCC----CC-ChhHHH-----H-H--------
Q 043471 345 YPENSFDVIYSR-DTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFG----TP-SVEFSE-----Y-I-------- 402 (485)
Q Consensus 345 ~~~~~fD~i~~~-~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~-~~~~~~-----~-~-------- 402 (485)
+ +++||+|++. .+++|++ +...+|++++++|||||++++..+..... .. ...+.. + +
T Consensus 147 ~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 225 (299)
T 3g2m_A 147 L-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAE 225 (299)
T ss_dssp C-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEE
T ss_pred c-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccc
Confidence 7 6899999965 6667665 46899999999999999999997654321 00 000000 0 0
Q ss_pred -------------------HhcCCCCCCHHHHHHHHHhCCCeEEEEeecc
Q 043471 403 -------------------KQRGYDLHDVKSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 403 -------------------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 433 (485)
......+++.+++.++|+++||+++.+....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 226 EIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 0011235699999999999999999987654
No 69
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.79 E-value=4.1e-19 Score=166.30 Aligned_cols=144 Identities=19% Similarity=0.244 Sum_probs=114.2
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcc-ccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRD-TIL 360 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~-~~~ 360 (485)
+++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. +++++++|+.++++ +++||+|++.. +++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~ 122 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP----DAVLHHGDMRDFSL-GRRFSAVTCMFSSIG 122 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTCCC-SCCEEEEEECTTGGG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC----CCEEEECChHHCCc-cCCcCEEEEcCchhh
Confidence 45689999999999999999988 6799999999999999999864 78999999999887 68999999998 999
Q ss_pred ccC---CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhH---------------------------------------
Q 043471 361 HIQ---DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEF--------------------------------------- 398 (485)
Q Consensus 361 ~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~--------------------------------------- 398 (485)
|++ +...++++++++|||||++++..+...........
T Consensus 123 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (263)
T 3pfg_A 123 HLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRG 202 (263)
T ss_dssp GSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCc
Confidence 995 56688999999999999999975433221100000
Q ss_pred -HHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 399 -SEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 399 -~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
..+.......+++.+++.++|+++||+++.+..
T Consensus 203 ~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~ 236 (263)
T 3pfg_A 203 ITHHEESHRITLFTREQYERAFTAAGLSVEFMPG 236 (263)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESS
T ss_pred EEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeC
Confidence 000000113467899999999999999988743
No 70
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.79 E-value=8.3e-19 Score=165.68 Aligned_cols=147 Identities=21% Similarity=0.332 Sum_probs=119.5
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~ 119 (485)
......+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.++++. ++++++++|+.. +++ ++
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~--~~~-~~ 116 (279)
T 3ccf_A 43 WQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY---PHLHFDVADARN--FRV-DK 116 (279)
T ss_dssp SSSCCHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTSCEEECCTTT--CCC-SS
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC---CCCEEEECChhh--CCc-CC
Confidence 344556777777778899999999999999999998899999999999999999876 589999999988 444 57
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCc---------------cccCCCCCCCCChhHHH
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGD---------------SKRKHNPTHYREPRFYS 184 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 184 (485)
+||+|+++.+++|+++ ...+++++.++|+|||++++..+....... ......+..+.+.+.+.
T Consensus 117 ~fD~v~~~~~l~~~~d--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKE--PEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYV 194 (279)
T ss_dssp CEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHH
T ss_pred CcCEEEEcchhhhCcC--HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHH
Confidence 9999999999999988 569999999999999999998765322100 00112233455788899
Q ss_pred HHhhhcceec
Q 043471 185 KVFKECQIQD 194 (485)
Q Consensus 185 ~~~~~~~~~~ 194 (485)
.+++++||..
T Consensus 195 ~~l~~aGf~~ 204 (279)
T 3ccf_A 195 NILEKQGFDV 204 (279)
T ss_dssp HHHHHHTEEE
T ss_pred HHHHHcCCEE
Confidence 9999999965
No 71
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.79 E-value=3.4e-19 Score=166.24 Aligned_cols=155 Identities=17% Similarity=0.234 Sum_probs=120.1
Q ss_pred ccChhhhHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccC
Q 043471 37 DLDKEERPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTS 111 (485)
Q Consensus 37 ~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~ 111 (485)
....+....+++.+. ..++.+|||||||+|..+..+++.+. +|+|+|+|+.+++.|+++... ..+++++++|+.+
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 107 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN 107 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 344566677777774 56678999999999999999999855 999999999999999987532 2359999999987
Q ss_pred CCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccC-----CCCCCCCChhHHHHH
Q 043471 112 PDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRK-----HNPTHYREPRFYSKV 186 (485)
Q Consensus 112 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 186 (485)
+++++++||+|+++.+++|+ + ...+++++.++|+|||++++.++........... .......+.+.+...
T Consensus 108 --~~~~~~~fD~v~~~~~l~~~-~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (257)
T 3f4k_A 108 --LPFQNEELDLIWSEGAIYNI-G--FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDK 182 (257)
T ss_dssp --CSSCTTCEEEEEEESCSCCC-C--HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHH
T ss_pred --CCCCCCCEEEEEecChHhhc-C--HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHH
Confidence 66778999999999999999 4 5689999999999999999988653322111100 001123467889999
Q ss_pred hhhcceecCC
Q 043471 187 FKECQIQDAS 196 (485)
Q Consensus 187 ~~~~~~~~~~ 196 (485)
++++||....
T Consensus 183 l~~aGf~~v~ 192 (257)
T 3f4k_A 183 MERAGYTPTA 192 (257)
T ss_dssp HHHTTEEEEE
T ss_pred HHHCCCeEEE
Confidence 9999996543
No 72
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=1.4e-19 Score=169.19 Aligned_cols=149 Identities=17% Similarity=0.171 Sum_probs=118.5
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~ 117 (485)
......+.+++.++..++.+|||||||+|..+..+++.+.+|+|+|+|+.|++.|+++. +++++++|+.+ ++++
T Consensus 18 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~d~~~--~~~~ 91 (261)
T 3ege_A 18 PDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP----QVEWFTGYAEN--LALP 91 (261)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT----TEEEECCCTTS--CCSC
T ss_pred ccHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc----CCEEEECchhh--CCCC
Confidence 34466778888888888999999999999999999999999999999999998877653 89999999988 6678
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc-CC-------CCCCCCChhHHHHHhhh
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR-KH-------NPTHYREPRFYSKVFKE 189 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~ 189 (485)
+++||+|++..+++|+++ ...++++++++|| ||++++.++.......... .. ....+...+.+. .+++
T Consensus 92 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 167 (261)
T 3ege_A 92 DKSVDGVISILAIHHFSH--LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQE 167 (261)
T ss_dssp TTCBSEEEEESCGGGCSS--HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHH
T ss_pred CCCEeEEEEcchHhhccC--HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHH
Confidence 899999999999999987 6799999999999 9988887765432211110 00 112334566777 9999
Q ss_pred cceecCC
Q 043471 190 CQIQDAS 196 (485)
Q Consensus 190 ~~~~~~~ 196 (485)
+||....
T Consensus 168 aGF~~v~ 174 (261)
T 3ege_A 168 NTKRRVE 174 (261)
T ss_dssp HHCSEEE
T ss_pred cCCCcee
Confidence 9995543
No 73
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.78 E-value=2e-18 Score=159.55 Aligned_cols=149 Identities=15% Similarity=0.109 Sum_probs=115.0
Q ss_pred HHHHHHHc-CCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC------------------CCCC
Q 043471 272 TKEFVAKL-DLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG------------------LKCS 332 (485)
Q Consensus 272 ~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~------------------~~~~ 332 (485)
+.+.+..+ ...++.+|||+|||+|..+..|++. |.+|+|+|+|+.|++.|+++... ...+
T Consensus 56 l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 56 LKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred HHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 33444332 3457789999999999999999988 88999999999999999877531 2357
Q ss_pred eEEEEccCCCCCCCC-CCccEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCC
Q 043471 333 VEFEVADCTKKTYPE-NSFDVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDL 409 (485)
Q Consensus 333 i~~~~~d~~~~~~~~-~~fD~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (485)
+++.++|+.++++++ ++||+|++..+++|++ ++..+++++.++|||||++++.+........ ......
T Consensus 135 i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~---------~g~~~~ 205 (252)
T 2gb4_A 135 ISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH---------AGPPFY 205 (252)
T ss_dssp EEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC---------CCSSCC
T ss_pred eEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC---------CCCCCC
Confidence 999999999988754 8999999999999995 4667999999999999999765443221110 001112
Q ss_pred CCHHHHHHHHHhCCCeEEEEee
Q 043471 410 HDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 410 ~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
.+.+++.+++.. +|+++..+.
T Consensus 206 ~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 206 VPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp CCHHHHHHHHTT-TEEEEEEEE
T ss_pred CCHHHHHHHhhC-CeEEEEEec
Confidence 578999999988 599887764
No 74
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.78 E-value=5.3e-19 Score=163.02 Aligned_cols=151 Identities=19% Similarity=0.244 Sum_probs=122.0
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~~~ 117 (485)
.+....+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++.. ..++++++++|+.. ++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~ 84 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES--LPFP 84 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB--CCSC
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccccc--CCCC
Confidence 3555677788888899999999999999999999999999999999999999988753 22479999999987 6677
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc---------cCCCCCCCCChhHHHHHhh
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK---------RKHNPTHYREPRFYSKVFK 188 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 188 (485)
+++||+|++..+++|+++ ...+++++.++|+|||.+++.+.......... .........+.+.+..+++
T Consensus 85 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 162 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFSD--VRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFS 162 (239)
T ss_dssp TTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHH
T ss_pred CCcEEEEEECCchhhccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHH
Confidence 899999999999999988 66999999999999999999876543221100 0112233347788999999
Q ss_pred hcceec
Q 043471 189 ECQIQD 194 (485)
Q Consensus 189 ~~~~~~ 194 (485)
++||..
T Consensus 163 ~aGf~~ 168 (239)
T 1xxl_A 163 ANQLAY 168 (239)
T ss_dssp HTTEEE
T ss_pred HCCCcE
Confidence 999964
No 75
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.78 E-value=5.3e-19 Score=166.45 Aligned_cols=149 Identities=19% Similarity=0.252 Sum_probs=120.1
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCC
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~ 117 (485)
....+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... .++++++++|+.+ ++++
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~ 126 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD--LPFE 126 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--CCSC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc--CCCC
Confidence 3456778888888999999999999999999986 78999999999999999987532 2479999999988 6677
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc---------cCCCCCCCCChhHHHHHhh
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK---------RKHNPTHYREPRFYSKVFK 188 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 188 (485)
+++||+|++..+++|+++ ...+++++.++|+|||.+++.++......... .........+.+.+...++
T Consensus 127 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 204 (273)
T 3bus_A 127 DASFDAVWALESLHHMPD--RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVR 204 (273)
T ss_dssp TTCEEEEEEESCTTTSSC--HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH
T ss_pred CCCccEEEEechhhhCCC--HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHH
Confidence 899999999999999988 56999999999999999999886543221110 0011233457788999999
Q ss_pred hcceec
Q 043471 189 ECQIQD 194 (485)
Q Consensus 189 ~~~~~~ 194 (485)
++||..
T Consensus 205 ~aGf~~ 210 (273)
T 3bus_A 205 QAELVV 210 (273)
T ss_dssp HTTCEE
T ss_pred HcCCeE
Confidence 999854
No 76
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.78 E-value=2.4e-19 Score=163.82 Aligned_cols=152 Identities=21% Similarity=0.306 Sum_probs=117.4
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC---CCCC-C
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK---TYPE-N 348 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~---~~~~-~ 348 (485)
..+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++ .++.+...|+.++ ++.. .
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~ 115 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGK 115 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCC
Confidence 45566665566789999999999999999988 78999999999999999987 2677888877665 4443 4
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCCh---h-----HHHHH---HhcCCCCCCHHHHHH
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSV---E-----FSEYI---KQRGYDLHDVKSYGQ 417 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~---~-----~~~~~---~~~~~~~~~~~~~~~ 417 (485)
+||+|++..+++ ..++..++++++++|||||++++.++......... . +..+. .+....+++.+++.+
T Consensus 116 ~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (227)
T 3e8s_A 116 DYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLN 194 (227)
T ss_dssp CEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHH
T ss_pred CccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHH
Confidence 599999999999 78999999999999999999999987553322110 0 00000 011124568999999
Q ss_pred HHHhCCCeEEEEee
Q 043471 418 MLKDAGFVDIIAED 431 (485)
Q Consensus 418 ~l~~aGf~~~~~~~ 431 (485)
+|+++||+++.+..
T Consensus 195 ~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 195 ALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHTTEEEEEEEC
T ss_pred HHHHcCCeEEEEec
Confidence 99999999998865
No 77
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.78 E-value=4.9e-19 Score=177.03 Aligned_cols=303 Identities=11% Similarity=0.084 Sum_probs=177.2
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCe
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
....+++.+...++.+|||||||+|.++..|++.+.+|+|+|+|+.+++.|+++........+...+... +++++++|
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~--l~~~~~~f 172 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADD--VRRTEGPA 172 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHH--HHHHHCCE
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhh--cccCCCCE
Confidence 4456777788788899999999999999999999999999999999999999872110111233344444 45567899
Q ss_pred eEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCC---CccccC-CCCCCCCChhHHHHHhhhcceecCCC
Q 043471 122 DMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQS---GDSKRK-HNPTHYREPRFYSKVFKECQIQDASG 197 (485)
Q Consensus 122 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 197 (485)
|+|+++.+++|+++ ...++++++++|||||++++..+..... ...... .....+.+.+.+..+++++||....-
T Consensus 173 D~I~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 173 NVIYAANTLCHIPY--VQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp EEEEEESCGGGCTT--HHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred EEEEECChHHhcCC--HHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 99999999999997 6799999999999999999986542110 000011 12334457889999999999965432
Q ss_pred CceeEEEeeeeecceEEeecCc---hhHHHHHHHHhhc---cCchhHHHhhhhhhccccchhHHHHHhccccccCCchHH
Q 043471 198 NSFELSLVGYKCIGAYVKNKKN---QNQICWIWQKVRS---QNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGGIET 271 (485)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
.... .. ...+......... ............. ...+.|..|........ +.
T Consensus 251 ~~~~--~~-~g~l~~~~~~~~~~~~~~~v~~~l~~e~~~gl~~~~~y~~f~~~~~~~~--------------------~~ 307 (416)
T 4e2x_A 251 QRLP--VH-GGEVRYTLARQGSRTPSAAVAQLLAAEREQELSDMATLRAFAGNVVKIR--------------------DE 307 (416)
T ss_dssp EEEC--GG-GSEEEEEEEETTSSCCCHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHH--------------------HH
T ss_pred EEcc--CC-CCEEEEEEEeCCCCCCchhHHHHHHHHHHCCCCChHHHHHHHHHHHHHH--------------------HH
Confidence 1111 00 1111122222111 1112222221111 11122333332221111 12
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHH-HHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDF-YMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~-~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
...++..+. ..|.+|+-.|+|....+. ..+... ..-...+|.+|.-... .++ +.++.++..+.. ....
T Consensus 308 l~~~l~~~k-~~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~---~~~--g~~ipi~~p~~~----~~~~ 377 (416)
T 4e2x_A 308 LTALLHRLR-AEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDKQNR---LTP--GAHIPVRPASAF----SDPY 377 (416)
T ss_dssp HHHHHHHHH-HTTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGGTTE---ECT--TTCCEEEEGGGC----CSSC
T ss_pred HHHHHHHHH-HcCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccccCc---cCC--CCCCcCCCHHHH----hhcC
Confidence 223333332 347789999987643332 222211 1223457887753110 111 224555554432 2355
Q ss_pred ccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEE
Q 043471 350 FDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 350 fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 385 (485)
.|.|+.... .+ ..++++++...+.-||++++.
T Consensus 378 ~d~vl~~~~-~~---~~ei~~~~~~~~~~g~~~~~~ 409 (416)
T 4e2x_A 378 PDYALLFAW-NH---AEEIMAKEQEFHQAGGRWILY 409 (416)
T ss_dssp CSEEEESCG-GG---HHHHHHHCHHHHHTTCEEEEC
T ss_pred CCEEEEecc-hh---HHHHHHHHHHHHhcCCEEEEE
Confidence 787665321 11 567778888888899999875
No 78
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.78 E-value=4.7e-19 Score=165.68 Aligned_cols=145 Identities=14% Similarity=0.057 Sum_probs=105.5
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCCC-----------------------------
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHFE----------------------------- 100 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~~----------------------------- 100 (485)
+..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|++.....+
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 456788999999999999888887775 79999999999999987643211
Q ss_pred --CeE-EEEeeccCCC-CC-CCCCCeeEEEhhhhhhccC--hHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCC
Q 043471 101 --NVK-FMCADVTSPD-LT-FSEDSVDMMFSNWLLMYLS--DKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHN 173 (485)
Q Consensus 101 --~~~-~~~~d~~~~~-~~-~~~~~~D~v~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~ 173 (485)
++. ++++|+.+.. ++ ...++||+|+++.++||+. .+.+..++++++++|||||.++++...............
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~ 211 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREF 211 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEe
Confidence 233 8899998731 11 2357999999999999963 244789999999999999999998653221100000011
Q ss_pred CCCCCChhHHHHHhhhcceecC
Q 043471 174 PTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
..+..+.+.+.+.+.++||...
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEE
Confidence 2233478899999999999543
No 79
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.78 E-value=8.3e-19 Score=159.10 Aligned_cols=114 Identities=21% Similarity=0.346 Sum_probs=100.2
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
.+...+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++....++++++++|+.+.+ ++++||+|
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---~~~~fD~v 118 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS---TAELFDLI 118 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC---CSCCEEEE
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC---CCCCccEE
Confidence 334456667788999999999999999999999999999999999999999876678999999998843 57899999
Q ss_pred EhhhhhhccCh-HHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 125 FSNWLLMYLSD-KEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 125 ~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+++.+++|+++ ....++++++.++|+|||.++++++.
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 99999999986 44678999999999999999997653
No 80
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.78 E-value=3.8e-19 Score=169.10 Aligned_cols=148 Identities=20% Similarity=0.176 Sum_probs=106.6
Q ss_pred CCCCCEEEEECCCCChhHHHH----hhcC-CCE--EEEEeCCHHHHHHHHHHhcCC--CCCeEE--EEccCCCCC-----
Q 043471 281 LKPGQKVLDVGCGIGGGDFYM----ADKF-DVH--VVGIDLSINMISFALERAIGL--KCSVEF--EVADCTKKT----- 344 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l----~~~~-~~~--v~g~D~s~~~~~~a~~~~~~~--~~~i~~--~~~d~~~~~----- 344 (485)
..++.+|||||||+|.++..+ +.+. +.. ++|+|+|+.|++.|++++... ..++.+ ..+++.+++
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 356789999999999766533 3332 454 499999999999999987532 124444 444544332
Q ss_pred -CCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHh----cCCCCCCHHHHHHHH
Q 043471 345 -YPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQ----RGYDLHDVKSYGQML 419 (485)
Q Consensus 345 -~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l 419 (485)
+++++||+|++..+++|++|+..+|++++|+|||||++++....... .....+..+... ....+.+.+++.++|
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSS-GWDKLWKKYGSRFPQDDLCQYITSDDLTQML 208 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTS-HHHHHHHHHGGGSCCCTTCCCCCHHHHHHHH
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCc-cHHHHHHHHHHhccCCCcccCCCHHHHHHHH
Confidence 56789999999999999999999999999999999999998654211 101112222211 123567899999999
Q ss_pred HhCCCeEEEE
Q 043471 420 KDAGFVDIIA 429 (485)
Q Consensus 420 ~~aGf~~~~~ 429 (485)
+++||+++..
T Consensus 209 ~~aGf~~~~~ 218 (292)
T 2aot_A 209 DNLGLKYECY 218 (292)
T ss_dssp HHHTCCEEEE
T ss_pred HHCCCceEEE
Confidence 9999998764
No 81
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.78 E-value=2.4e-18 Score=153.79 Aligned_cols=148 Identities=19% Similarity=0.254 Sum_probs=119.4
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCCCCccE
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPENSFDV 352 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~fD~ 352 (485)
.+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++....+ .++++..+|+.+.++ +++||+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~ 100 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDF 100 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceE
Confidence 4556666667789999999999999999988 7899999999999999999875332 269999999999887 789999
Q ss_pred EEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEe
Q 043471 353 IYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAE 430 (485)
Q Consensus 353 i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 430 (485)
|++..+++|++ +...+++++.++|||||++++.+.......... ......++.+++.+++++ |+++..+
T Consensus 101 v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 101 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT-------VGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC-------SCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC-------CCCCCccCHHHHHHHhcC--CeEEEec
Confidence 99999999997 889999999999999999888765443322111 111234578899999987 9998876
Q ss_pred ec
Q 043471 431 DR 432 (485)
Q Consensus 431 ~~ 432 (485)
..
T Consensus 172 ~~ 173 (199)
T 2xvm_A 172 ED 173 (199)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 82
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.78 E-value=8e-19 Score=161.25 Aligned_cols=141 Identities=21% Similarity=0.318 Sum_probs=112.6
Q ss_pred CCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCC-------CeEEEEeeccCCCCCCCCCCeeEEEh
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFE-------NVKFMCADVTSPDLTFSEDSVDMMFS 126 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~D~v~~ 126 (485)
++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++....+ +++++++|+.. +++++++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASS--LSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTS--CCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccc--cCCCCCceeEEEE
Confidence 57899999999999999999999999999999999999999865422 58999999988 5567899999999
Q ss_pred hhhhhccChH-HHHHHHHHHHhhcccCcEEEEEeccCCCCCccc-------------------cC------CCCCCCCCh
Q 043471 127 NWLLMYLSDK-EVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK-------------------RK------HNPTHYREP 180 (485)
Q Consensus 127 ~~~~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-------------------~~------~~~~~~~~~ 180 (485)
+.+++|+++. ....+++++.++|+|||.+++.++......... .. .......+.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTE 187 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCH
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCH
Confidence 9999999763 356899999999999999999876542111000 00 001234578
Q ss_pred hHHHHHhhhcceecCC
Q 043471 181 RFYSKVFKECQIQDAS 196 (485)
Q Consensus 181 ~~~~~~~~~~~~~~~~ 196 (485)
+.+.++++++||....
T Consensus 188 ~~l~~ll~~aGf~~~~ 203 (235)
T 3sm3_A 188 KELVFLLTDCRFEIDY 203 (235)
T ss_dssp HHHHHHHHTTTEEEEE
T ss_pred HHHHHHHHHcCCEEEE
Confidence 9999999999996544
No 83
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=5.1e-18 Score=158.38 Aligned_cols=146 Identities=16% Similarity=0.222 Sum_probs=118.0
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~ 117 (485)
......+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.++++. ++++++++|+.+ ++ +
T Consensus 19 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~--~~-~ 92 (259)
T 2p35_A 19 TRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---PNTNFGKADLAT--WK-P 92 (259)
T ss_dssp GHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---TTSEEEECCTTT--CC-C
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---CCcEEEECChhh--cC-c
Confidence 344567888888888899999999999999999998 789999999999999999883 689999999988 44 6
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCC-------------ccc--cC--CCCCCCCCh
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSG-------------DSK--RK--HNPTHYREP 180 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-------------~~~--~~--~~~~~~~~~ 180 (485)
+++||+|+++.+++|+++ ...+++++.++|+|||.+++..+...... ... .. .....+.+.
T Consensus 93 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPD--HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPP 170 (259)
T ss_dssp SSCEEEEEEESCGGGSTT--HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCH
T ss_pred cCCcCEEEEeCchhhCCC--HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCH
Confidence 789999999999999987 66999999999999999999875432110 000 00 113345578
Q ss_pred hHHHHHhhhccee
Q 043471 181 RFYSKVFKECQIQ 193 (485)
Q Consensus 181 ~~~~~~~~~~~~~ 193 (485)
+.+.+.++++||.
T Consensus 171 ~~~~~~l~~aGf~ 183 (259)
T 2p35_A 171 SDYFNALSPKSSR 183 (259)
T ss_dssp HHHHHHHGGGEEE
T ss_pred HHHHHHHHhcCCc
Confidence 8999999999984
No 84
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.77 E-value=9.6e-19 Score=158.82 Aligned_cols=152 Identities=11% Similarity=0.114 Sum_probs=113.6
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCCCC-------CeEEEEeecc
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGHFE-------NVKFMCADVT 110 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~ 110 (485)
+.....+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|+++....+ +++++++|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 3445566666666778899999999999999999875 599999999999999999865322 7999999987
Q ss_pred CCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCC------CCccccCCCCCCCCChhHHH
Q 043471 111 SPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQ------SGDSKRKHNPTHYREPRFYS 184 (485)
Q Consensus 111 ~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 184 (485)
. .+.++++||+|+++.+++|++++....+++++.++|||||.+++....... ..............+++.+.
T Consensus 95 ~--~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (217)
T 3jwh_A 95 Y--QDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQ 172 (217)
T ss_dssp S--CCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHH
T ss_pred c--ccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHH
Confidence 6 445668999999999999999876789999999999999987776443110 00001111122223566666
Q ss_pred ----HHhhhccee
Q 043471 185 ----KVFKECQIQ 193 (485)
Q Consensus 185 ----~~~~~~~~~ 193 (485)
.++++.||.
T Consensus 173 ~~~~~~~~~~Gf~ 185 (217)
T 3jwh_A 173 NWANKITERFAYN 185 (217)
T ss_dssp HHHHHHHHHSSEE
T ss_pred HHHHHHHHHcCce
Confidence 788888885
No 85
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.77 E-value=9.7e-19 Score=159.01 Aligned_cols=152 Identities=12% Similarity=0.132 Sum_probs=113.2
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCCCC-------CeEEEEeecc
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGHFE-------NVKFMCADVT 110 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~ 110 (485)
+...+.+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|+++....+ +++++++|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 3444556666666678899999999999999999986 599999999999999999864322 7999999997
Q ss_pred CCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCc------cccCCCCCCCCChhHHH
Q 043471 111 SPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGD------SKRKHNPTHYREPRFYS 184 (485)
Q Consensus 111 ~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 184 (485)
. .++++++||+|+++.+++|++++...++++++.++|||||.+++.......... ..+........+++.+.
T Consensus 95 ~--~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (219)
T 3jwg_A 95 Y--RDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQ 172 (219)
T ss_dssp S--CCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHH
T ss_pred c--cccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHH
Confidence 6 555678999999999999999876789999999999999976665432211000 00111222223556666
Q ss_pred ----HHhhhccee
Q 043471 185 ----KVFKECQIQ 193 (485)
Q Consensus 185 ----~~~~~~~~~ 193 (485)
.++++.||.
T Consensus 173 ~~~~~l~~~~Gf~ 185 (219)
T 3jwg_A 173 TWAVKVAEKYGYS 185 (219)
T ss_dssp HHHHHHHHHHTEE
T ss_pred HHHHHHHHHCCcE
Confidence 777888874
No 86
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.77 E-value=1e-18 Score=166.64 Aligned_cols=160 Identities=21% Similarity=0.234 Sum_probs=122.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCCC-CCCCccEEEEcc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKTY-PENSFDVIYSRD 357 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~~-~~~~fD~i~~~~ 357 (485)
+.++.+|||||||+|.++..+++....+++|+|+|+.+++.|+++....+ .++++.++|+.+.++ ++++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 56788999999999999999888733499999999999999999986443 468999999999887 578999999999
Q ss_pred cccc----cCCHHHHHHHHHhcCCCCcEEEEEecccCCC-----------------------CCC---hhH----HHHHH
Q 043471 358 TILH----IQDKPALFKSFFKWLKPGGTVLISDYCKSFG-----------------------TPS---VEF----SEYIK 403 (485)
Q Consensus 358 ~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-----------------------~~~---~~~----~~~~~ 403 (485)
+++| ..++..+++++.++|||||++++..+..... .+. ..+ .....
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 221 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN 221 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhc
Confidence 9987 3577899999999999999999987543100 000 000 00000
Q ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeecchHHHHHH
Q 043471 404 QRGYDLHDVKSYGQMLKDAGFVDIIAEDRTEQFVQVL 440 (485)
Q Consensus 404 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~ 440 (485)
.....+++.+++.++|+++||+++........|...+
T Consensus 222 ~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~~~~~ 258 (298)
T 1ri5_A 222 NCIEYFVDFTRMVDGFKRLGLSLVERKGFIDFYEDEG 258 (298)
T ss_dssp SEEEECCCHHHHHHHHHTTTEEEEEEEEHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHcCCEEEEecCHHHHHHHHH
Confidence 0012456889999999999999999987766554443
No 87
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.77 E-value=2.2e-18 Score=159.41 Aligned_cols=147 Identities=18% Similarity=0.146 Sum_probs=116.0
Q ss_pred CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcc-cccc
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRD-TILH 361 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~-~~~~ 361 (485)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+.++++.++|+.+++++ ++||+|++.. +++|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccc
Confidence 6789999999999999999988 78999999999999999998865545799999999998876 8899999998 9999
Q ss_pred c---CCHHHHHHHHHhcCCCCcEEEEEecccCCC---CCC-----------hhHHH-----------------------H
Q 043471 362 I---QDKPALFKSFFKWLKPGGTVLISDYCKSFG---TPS-----------VEFSE-----------------------Y 401 (485)
Q Consensus 362 ~---~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~-----------~~~~~-----------------------~ 401 (485)
+ .+...++++++++|||||++++........ ... ..+.. .
T Consensus 115 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRF 194 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCccccc
Confidence 9 567889999999999999999865432100 000 00000 0
Q ss_pred HHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 402 IKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 402 ~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
........++.+++.++|+++||+++.+..
T Consensus 195 ~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 224 (246)
T 1y8c_A 195 DEEHEERAYKEEDIEKYLKHGQLNILDKVD 224 (246)
T ss_dssp EEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEEEEcCCHHHHHHHHHHCCCeEEEEEc
Confidence 000113567999999999999999988754
No 88
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.77 E-value=2.3e-18 Score=164.38 Aligned_cols=152 Identities=21% Similarity=0.241 Sum_probs=117.6
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCC---CCCeEEEEccCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGL---KCSVEFEVADCTKKTYP 346 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~---~~~i~~~~~d~~~~~~~ 346 (485)
....+..+...++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++... ..+++++++|+.+++++
T Consensus 25 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~ 104 (299)
T 3g5t_A 25 FYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL 104 (299)
T ss_dssp HHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc
Confidence 3444444445678899999999999999999743 679999999999999999987654 56899999999998877
Q ss_pred C------CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCC----CCChhHHHHHHhc--CCCC---CC
Q 043471 347 E------NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFG----TPSVEFSEYIKQR--GYDL---HD 411 (485)
Q Consensus 347 ~------~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~~~--~~~~---~~ 411 (485)
+ ++||+|++..+++|+ ++..+++++.++|||||.+++.++..... .....+..+.... ...+ ..
T Consensus 105 ~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~ 183 (299)
T 3g5t_A 105 GADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPG 183 (299)
T ss_dssp CTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTH
T ss_pred ccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchh
Confidence 6 899999999999999 99999999999999999999955433211 1112233332210 1112 45
Q ss_pred HHHHHHHHHhCCC
Q 043471 412 VKSYGQMLKDAGF 424 (485)
Q Consensus 412 ~~~~~~~l~~aGf 424 (485)
.+.+.+.++++||
T Consensus 184 ~~~~~~~l~~~gf 196 (299)
T 3g5t_A 184 RSRLRNMLKDSHL 196 (299)
T ss_dssp HHHHHTTTTTCCC
T ss_pred hHHHHHhhhccCC
Confidence 5678999999999
No 89
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.77 E-value=1e-18 Score=165.57 Aligned_cols=146 Identities=21% Similarity=0.299 Sum_probs=115.0
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCCCCCCCCe
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
.+++.+... +.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++.... ++++++++|+.+++ ++++++|
T Consensus 60 ~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~f 137 (285)
T 4htf_A 60 RVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA-SHLETPV 137 (285)
T ss_dssp HHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG-GGCSSCE
T ss_pred HHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh-hhcCCCc
Confidence 455555544 679999999999999999999999999999999999999876432 47999999998832 2567899
Q ss_pred eEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCC------------------CCccccCCCCCCCCChhHH
Q 043471 122 DMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQ------------------SGDSKRKHNPTHYREPRFY 183 (485)
Q Consensus 122 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~ 183 (485)
|+|++..+++|+++ ...+++++.++|+|||.+++.+++... .........+..+.+++.+
T Consensus 138 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 138 DLILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred eEEEECchhhcccC--HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 99999999999988 569999999999999999998754211 0000111223345588999
Q ss_pred HHHhhhcceec
Q 043471 184 SKVFKECQIQD 194 (485)
Q Consensus 184 ~~~~~~~~~~~ 194 (485)
..+++++||..
T Consensus 216 ~~~l~~aGf~v 226 (285)
T 4htf_A 216 YLWLEEAGWQI 226 (285)
T ss_dssp HHHHHHTTCEE
T ss_pred HHHHHHCCCce
Confidence 99999999964
No 90
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.77 E-value=2.4e-18 Score=153.85 Aligned_cols=141 Identities=23% Similarity=0.273 Sum_probs=111.2
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCCCCCCCe
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
..+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.. ..++++++++|+.+ +++ +++|
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~-~~~~ 98 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN--LTF-DRQY 98 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG--CCC-CCCE
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh--CCC-CCCc
Confidence 356666666678899999999999999999999999999999999999998643 22479999999988 445 7899
Q ss_pred eEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhh
Q 043471 122 DMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKE 189 (485)
Q Consensus 122 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (485)
|+|+++.+++|++.+....+++++.++|+|||.+++.+........ .........+++.+.++++.
T Consensus 99 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~ 164 (199)
T 2xvm_A 99 DFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYP--CTVGFPFAFKEGELRRYYEG 164 (199)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC--CCSCCSCCBCTTHHHHHTTT
T ss_pred eEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcC--CCCCCCCccCHHHHHHHhcC
Confidence 9999999999998666889999999999999998876543322111 11122234477888888876
No 91
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.76 E-value=3e-19 Score=163.13 Aligned_cols=181 Identities=13% Similarity=0.178 Sum_probs=127.1
Q ss_pred ChhHHHHHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCC
Q 043471 6 NHGEREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFI 85 (485)
Q Consensus 6 ~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s 85 (485)
|+...+..+.||+.....+... ................+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|
T Consensus 6 m~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s 83 (227)
T 3e8s_A 6 MRNPEDALLDSWHQNAQAWIDA--VRHGAIESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADRGIEAVGVDGD 83 (227)
T ss_dssp --CHHHHHHHHHHHHHHHHHHH--HHHTCCHHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESC
T ss_pred hhcHHHHHHHHHHhhHHHHHHH--hcccccccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCC
Confidence 3444566788999765544321 11111111112233456677666777999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCeEEEEeeccCCC-CCCC-CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 86 DSVIKKNEEVNGHFENVKFMCADVTSPD-LTFS-EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 86 ~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~-~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
+.+++.|+++ .++.+..+|+.+.. .++. .++||+|+++.+++ ..+ ...+++++.++|+|||++++.++...
T Consensus 84 ~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 84 RTLVDAARAA----GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQD--IIELLSAMRTLLVPGGALVIQTLHPW 156 (227)
T ss_dssp HHHHHHHHHT----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSC--CHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHh----cccccchhhHHhhcccccccCCCccEEEECchhh-hhh--HHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 9999999987 57888998887641 1333 44599999999988 555 56899999999999999999877553
Q ss_pred CCCcc--cc--------------CCCCCCCCChhHHHHHhhhcceecC
Q 043471 164 QSGDS--KR--------------KHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 164 ~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
..... .. ......+.+.+.+.+.++++||...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 157 SVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp TTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred ccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 32211 00 0011233478899999999999654
No 92
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.76 E-value=8.5e-20 Score=182.58 Aligned_cols=160 Identities=20% Similarity=0.268 Sum_probs=121.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCe-EEEEccCCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSV-EFEVADCTKKTYPEN 348 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i-~~~~~d~~~~~~~~~ 348 (485)
..+..+++.+.+.++.+|||||||+|.++..+++. +.+++|+|+|+.+++.|+++ +..... .+...+...++++++
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~l~~~~~ 170 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK--GIRVRTDFFEKATADDVRRTEG 170 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT--TCCEECSCCSHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc--CCCcceeeechhhHhhcccCCC
Confidence 45667788888888999999999999999999987 77999999999999999876 221111 122334444556678
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
+||+|++.++++|++++..++++++++|||||++++..+..........+... ...+..+++.+++.++++++||++++
T Consensus 171 ~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~l~~ll~~aGf~~~~ 249 (416)
T 4e2x_A 171 PANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQI-FDEHFFLFSATSVQGMAQRCGFELVD 249 (416)
T ss_dssp CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGC-STTCCEECCHHHHHHHHHHTTEEEEE
T ss_pred CEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhh-hhhhhhcCCHHHHHHHHHHcCCEEEE
Confidence 99999999999999999999999999999999999986542110000000001 12344578999999999999999998
Q ss_pred Eeecc
Q 043471 429 AEDRT 433 (485)
Q Consensus 429 ~~~~~ 433 (485)
++...
T Consensus 250 ~~~~~ 254 (416)
T 4e2x_A 250 VQRLP 254 (416)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 87643
No 93
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.76 E-value=1.7e-18 Score=159.67 Aligned_cols=116 Identities=15% Similarity=0.156 Sum_probs=98.2
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCC---CC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDL---TF 116 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~---~~ 116 (485)
+...+.+++.+...++.+|||||||+|.++..|++++.+|+|+|+|+.|++.|+++.... ++.+++.+.+. ..
T Consensus 31 ~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~ 106 (261)
T 3iv6_A 31 PSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKE 106 (261)
T ss_dssp CCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc----cceeeeeecccccccc
Confidence 356677888888889999999999999999999999999999999999999999987542 45566655333 12
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
.+++||+|+++.+++|+..++...+++++.++| |||.++++..
T Consensus 107 ~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 107 LAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 257999999999999998777889999999999 9999999754
No 94
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.76 E-value=5.3e-18 Score=154.14 Aligned_cols=133 Identities=18% Similarity=0.269 Sum_probs=111.3
Q ss_pred CCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcccccccC
Q 043471 284 GQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTILHIQ 363 (485)
Q Consensus 284 ~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~ 363 (485)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ ++++..+|+.++++++++||+|++..+++|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhcc
Confidence 779999999999999988765 9999999999999886 58899999999888888999999999999999
Q ss_pred CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHH--------hcCCCCCCHHHHHHHHHhCCCeEEEEeec
Q 043471 364 DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIK--------QRGYDLHDVKSYGQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 364 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 432 (485)
++..+++++.++|+|||.+++.++.... .+..... .....+++.+++.++|+++||+++.+...
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVGIVDRES-----FLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSS-----HHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeCCcc-----HHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 9999999999999999999998765421 1111111 01235678999999999999999887653
No 95
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.76 E-value=3.8e-18 Score=154.47 Aligned_cols=141 Identities=19% Similarity=0.225 Sum_probs=108.8
Q ss_pred HHHHHHhhhcCcCcchhhhhcCCCcCccC--h-hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCCh
Q 043471 11 EIQKNYWMEHSANLTVEAMMLDSKASDLD--K-EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFID 86 (485)
Q Consensus 11 ~~~~~yw~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~ 86 (485)
..++.||++.+...... ....|. . .....+.+.+ .++.+|||||||+|.++..+++.+. +|+|+|+|+
T Consensus 4 ~~~~~~W~~~y~~~~~~------~~~~~~~~~~~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~ 75 (215)
T 2pxx_A 4 YREVEYWDQRYQGAADS------APYDWFGDFSSFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSS 75 (215)
T ss_dssp GGCHHHHHHHTTTTTTS------CCCCTTCCHHHHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCH
T ss_pred ccchhHHHHHhccCCCC------CCcccccCHHHHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCH
Confidence 45678999866533200 111121 1 2223333333 5678999999999999999999876 899999999
Q ss_pred HHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccC-------------hHHHHHHHHHHHhhcccCc
Q 043471 87 SVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLS-------------DKEVEKLAERMVKWLKVGG 153 (485)
Q Consensus 87 ~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~-------------~~~~~~~l~~~~~~L~pgG 153 (485)
.+++.|+++....++++++++|+.+ +++++++||+|+++.+++++. ......+++++.++|+|||
T Consensus 76 ~~~~~a~~~~~~~~~i~~~~~d~~~--~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 153 (215)
T 2pxx_A 76 VVVAAMQACYAHVPQLRWETMDVRK--LDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGG 153 (215)
T ss_dssp HHHHHHHHHTTTCTTCEEEECCTTS--CCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEE
T ss_pred HHHHHHHHhcccCCCcEEEEcchhc--CCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCC
Confidence 9999999987655689999999988 456788999999998887765 3346799999999999999
Q ss_pred EEEEEecc
Q 043471 154 YIFFRESC 161 (485)
Q Consensus 154 ~l~~~~~~ 161 (485)
.+++.++.
T Consensus 154 ~li~~~~~ 161 (215)
T 2pxx_A 154 RFISMTSA 161 (215)
T ss_dssp EEEEEESC
T ss_pred EEEEEeCC
Confidence 99998764
No 96
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.76 E-value=1.6e-18 Score=162.16 Aligned_cols=148 Identities=14% Similarity=0.027 Sum_probs=109.8
Q ss_pred CCCCCCEEEEECCCCChhHHHHhhcCCC-EEEEEeCCHHHHHHHHHHhcCCC----------------------------
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMADKFDV-HVVGIDLSINMISFALERAIGLK---------------------------- 330 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~---------------------------- 330 (485)
...++.+|||||||+|.++..++.. +. +|+|+|+|+.|++.|++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 4567889999999999888776665 44 79999999999999998764321
Q ss_pred --CCeE-EEEccCCCC-CC---CCCCccEEEEccccccc----CCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHH
Q 043471 331 --CSVE-FEVADCTKK-TY---PENSFDVIYSRDTILHI----QDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFS 399 (485)
Q Consensus 331 --~~i~-~~~~d~~~~-~~---~~~~fD~i~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 399 (485)
.++. ++++|+.+. |+ ..++||+|+++.++||+ ++...++++++++|||||+|++++........ ..
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~---~g 207 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM---VG 207 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE---ET
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce---eC
Confidence 1233 888999873 43 25789999999999986 35578999999999999999999754321100 00
Q ss_pred HHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeecc
Q 043471 400 EYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 433 (485)
. .......++.+++.++|+++||+++.+....
T Consensus 208 ~--~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 208 K--REFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp T--EEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred C--eEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 0 0011134689999999999999998887643
No 97
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.76 E-value=1.6e-18 Score=164.60 Aligned_cols=147 Identities=11% Similarity=-0.009 Sum_probs=108.8
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCC------------------------------
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKC------------------------------ 331 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~------------------------------ 331 (485)
.++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|++++.....
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 36789999999999966555544467999999999999999886542110
Q ss_pred -CeEEEEccCCC-CCC-----CCCCccEEEEcccccc----cCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHH
Q 043471 332 -SVEFEVADCTK-KTY-----PENSFDVIYSRDTILH----IQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSE 400 (485)
Q Consensus 332 -~i~~~~~d~~~-~~~-----~~~~fD~i~~~~~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 400 (485)
.++++.+|+.+ +|+ ++++||+|+++.+++| ++++..+|++++++|||||++++........... .
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~---~- 225 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLA---G- 225 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEE---T-
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEc---C-
Confidence 14567778887 553 3467999999999999 5578999999999999999999985332110000 0
Q ss_pred HHHhcCCCCCCHHHHHHHHHhCCCeEEEEeecc
Q 043471 401 YIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 433 (485)
........++.+++.++|+++||+++.+....
T Consensus 226 -~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 226 -EARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp -TEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -CeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 00111346789999999999999999887654
No 98
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.76 E-value=1.6e-18 Score=160.56 Aligned_cols=102 Identities=23% Similarity=0.315 Sum_probs=90.8
Q ss_pred CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccccccc
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTILHI 362 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~~ 362 (485)
.+.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|+++ .++++.++|++++++++++||+|++..++||+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~-----~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~ 112 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH-----PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF 112 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC-----TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC
T ss_pred CCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc-----CCceeehhhhhhhcccCCcccEEEEeeehhHh
Confidence 4569999999999999999987 67999999999999887542 47999999999999999999999999999887
Q ss_pred CCHHHHHHHHHhcCCCCcEEEEEecccCC
Q 043471 363 QDKPALFKSFFKWLKPGGTVLISDYCKSF 391 (485)
Q Consensus 363 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 391 (485)
++++++++++|+|||||+|++..+....
T Consensus 113 -~~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 113 -DLDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred -hHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 6889999999999999999998765443
No 99
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.76 E-value=1.4e-17 Score=161.56 Aligned_cols=162 Identities=16% Similarity=0.209 Sum_probs=128.5
Q ss_pred HHHHHHHHHcCC--CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCC
Q 043471 270 ETTKEFVAKLDL--KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKT 344 (485)
Q Consensus 270 ~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~ 344 (485)
.....+++.+.. .++.+|||+|||+|.++..+++.+ +.+++++|+| .+++.|++++. ++..++++..+|+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 150 NPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD 228 (335)
T ss_dssp HHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC
T ss_pred hhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC
Confidence 345567777776 788899999999999999999886 6799999999 99999999875 33447999999998877
Q ss_pred CCCCCccEEEEcccccccCC--HHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHH------HhcCCCCCCHHHHH
Q 043471 345 YPENSFDVIYSRDTILHIQD--KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYI------KQRGYDLHDVKSYG 416 (485)
Q Consensus 345 ~~~~~fD~i~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 416 (485)
++. .||+|++.++++|+++ ...++++++++|+|||++++.+................ ...+...++.++|.
T Consensus 229 ~~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 307 (335)
T 2r3s_A 229 YGN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYE 307 (335)
T ss_dssp CCS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHH
T ss_pred CCC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHH
Confidence 654 4999999999999954 47999999999999999999987765432222211111 11134678999999
Q ss_pred HHHHhCCCeEEEEeecc
Q 043471 417 QMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 417 ~~l~~aGf~~~~~~~~~ 433 (485)
++++++||+++.+....
T Consensus 308 ~ll~~aGf~~~~~~~~~ 324 (335)
T 2r3s_A 308 SMFSNAGFSHSQLHSLP 324 (335)
T ss_dssp HHHHHTTCSEEEEECCT
T ss_pred HHHHHCCCCeeeEEECC
Confidence 99999999999887644
No 100
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.76 E-value=1.3e-17 Score=161.47 Aligned_cols=157 Identities=20% Similarity=0.182 Sum_probs=123.5
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCc
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSF 350 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~f 350 (485)
.+++.+...+..+|||||||+|.++..+++++ +.+++++|+ +.+++.|++++. ++..++++..+|+. .+++. +|
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~ 236 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GA 236 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SC
T ss_pred HHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CC
Confidence 34455556667899999999999999999876 679999999 999999999876 34468999999997 45555 89
Q ss_pred cEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHH-HHhcCCCCCCHHHHHHHHHhCCCeEE
Q 043471 351 DVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEY-IKQRGYDLHDVKSYGQMLKDAGFVDI 427 (485)
Q Consensus 351 D~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~aGf~~~ 427 (485)
|+|++.+++||+++. .+++++++++|+|||++++.+.......+...+.-. ....+...++.++|.++|+++||+++
T Consensus 237 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 237 GGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEE
T ss_pred cEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEE
Confidence 999999999999874 889999999999999999998765544221111111 11233457899999999999999999
Q ss_pred EEeecc
Q 043471 428 IAEDRT 433 (485)
Q Consensus 428 ~~~~~~ 433 (485)
++....
T Consensus 317 ~~~~~~ 322 (332)
T 3i53_A 317 AAHPIS 322 (332)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 887543
No 101
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.76 E-value=5.2e-18 Score=160.92 Aligned_cols=147 Identities=11% Similarity=0.095 Sum_probs=116.2
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHh-hcCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAK-KAGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~ 118 (485)
...+++.+...++.+|||||||+|.++..+++ .+.+|+|+|+|+++++.|+++... .++++++++|+.+ ++
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~--- 127 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ--FD--- 127 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG--CC---
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh--CC---
Confidence 34667788888899999999999999999995 488999999999999999987543 2479999999976 43
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc------------------c-CCCCCCCCC
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK------------------R-KHNPTHYRE 179 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~------------------~-~~~~~~~~~ 179 (485)
++||+|++..+++|++++....+++++.++|||||.+++.++......... . ........+
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 207 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPS 207 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCC
Confidence 789999999999999654578999999999999999999877643211100 0 011123347
Q ss_pred hhHHHHHhhhcceec
Q 043471 180 PRFYSKVFKECQIQD 194 (485)
Q Consensus 180 ~~~~~~~~~~~~~~~ 194 (485)
.+.+...++++||..
T Consensus 208 ~~~~~~~l~~aGf~~ 222 (287)
T 1kpg_A 208 IPMVQECASANGFTV 222 (287)
T ss_dssp HHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHhCCcEE
Confidence 888999999999854
No 102
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.76 E-value=2.9e-18 Score=158.39 Aligned_cols=114 Identities=24% Similarity=0.471 Sum_probs=100.6
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCe
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
+..+.+.++..++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++... .+++++++|+.. +++++++|
T Consensus 32 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~--~~~~~~~f 108 (243)
T 3bkw_A 32 WPALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-TGITYERADLDK--LHLPQDSF 108 (243)
T ss_dssp HHHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-SSEEEEECCGGG--CCCCTTCE
T ss_pred HHHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-CCceEEEcChhh--ccCCCCCc
Confidence 34567777777889999999999999999999988 999999999999999998654 479999999988 55678899
Q ss_pred eEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 122 DMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 122 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
|+|++..+++|+++ ...+++++.++|+|||.+++....
T Consensus 109 D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 109 DLAYSSLALHYVED--VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEEeccccccch--HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 99999999999987 669999999999999999997643
No 103
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.76 E-value=4.1e-17 Score=160.13 Aligned_cols=157 Identities=17% Similarity=0.197 Sum_probs=127.6
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~ 348 (485)
...+++.+.+.++.+|||||||+|.++..+++++ +.+++++|+ +.+++.|++++. ++..++++..+|+. .+++.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~- 267 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD- 267 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-
Confidence 4567778888888999999999999999999986 679999999 999999999875 34568999999998 56665
Q ss_pred CccEEEEcccccccCCHH--HHHHHHHhcCCCCcEEEEEecccCCCCCCh-hHHHH--HHhcCCCCCCHHHHHHHHHhCC
Q 043471 349 SFDVIYSRDTILHIQDKP--ALFKSFFKWLKPGGTVLISDYCKSFGTPSV-EFSEY--IKQRGYDLHDVKSYGQMLKDAG 423 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~l~~aG 423 (485)
+||+|++.+++|++++.. ++|++++++|||||++++.+.......... .+... ....+...++.++|.++|+++|
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 347 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSG 347 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTT
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCC
Confidence 899999999999998765 799999999999999999987665443221 11111 1122345678999999999999
Q ss_pred CeEEEEee
Q 043471 424 FVDIIAED 431 (485)
Q Consensus 424 f~~~~~~~ 431 (485)
|+++.+..
T Consensus 348 f~~~~~~~ 355 (369)
T 3gwz_A 348 LRVERSLP 355 (369)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 99998866
No 104
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.75 E-value=7.1e-19 Score=159.72 Aligned_cols=151 Identities=17% Similarity=0.244 Sum_probs=117.1
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLT 115 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~ 115 (485)
......+++.+...++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... .++++++++|+.+ ++
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~ 106 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN--IP 106 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB--CS
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH--CC
Confidence 3455667777776666 9999999999999999998 77999999999999999987432 2479999999988 56
Q ss_pred CCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc-----cCC---------CCCCCCChh
Q 043471 116 FSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK-----RKH---------NPTHYREPR 181 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~ 181 (485)
+++++||+|+++.+++|+++ ...+++++.++|+|||.+++.+.......... ... ......+.+
T Consensus 107 ~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (219)
T 3dlc_A 107 IEDNYADLIVSRGSVFFWED--VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVE 184 (219)
T ss_dssp SCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHH
T ss_pred CCcccccEEEECchHhhccC--HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHH
Confidence 77899999999999999977 66999999999999999999864432110000 000 112223567
Q ss_pred HHHHHhhhcceecC
Q 043471 182 FYSKVFKECQIQDA 195 (485)
Q Consensus 182 ~~~~~~~~~~~~~~ 195 (485)
.+...++++||...
T Consensus 185 ~~~~~l~~aGf~~v 198 (219)
T 3dlc_A 185 RFQNVLDEIGISSY 198 (219)
T ss_dssp HHHHHHHHHTCSSE
T ss_pred HHHHHHHHcCCCeE
Confidence 89999999999553
No 105
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.75 E-value=1.9e-18 Score=150.42 Aligned_cols=137 Identities=16% Similarity=0.195 Sum_probs=111.2
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeE
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDM 123 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~ 123 (485)
..+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++ .++++++.+| +++++++||+
T Consensus 7 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~v~~~~~d-----~~~~~~~~D~ 78 (170)
T 3i9f_A 7 EEYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---FDSVITLSDP-----KEIPDNSVDF 78 (170)
T ss_dssp TTTHHHHHSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---CTTSEEESSG-----GGSCTTCEEE
T ss_pred HHHHHhcCcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---CCCcEEEeCC-----CCCCCCceEE
Confidence 3455556667788999999999999999999977999999999999999998 3689999998 3456789999
Q ss_pred EEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceecC
Q 043471 124 MFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 124 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
|+++.+++|+++ ...+++++.++|+|||.+++.++....... ........+.+.+.++++ ||...
T Consensus 79 v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~--Gf~~~ 143 (170)
T 3i9f_A 79 ILFANSFHDMDD--KQHVISEVKRILKDDGRVIIIDWRKENTGI---GPPLSIRMDEKDYMGWFS--NFVVE 143 (170)
T ss_dssp EEEESCSTTCSC--HHHHHHHHHHHEEEEEEEEEEEECSSCCSS---SSCGGGCCCHHHHHHHTT--TEEEE
T ss_pred EEEccchhcccC--HHHHHHHHHHhcCCCCEEEEEEcCcccccc---CchHhhhcCHHHHHHHHh--CcEEE
Confidence 999999999987 669999999999999999998776443211 111223347888999998 88543
No 106
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.75 E-value=4.4e-18 Score=163.33 Aligned_cols=145 Identities=15% Similarity=0.227 Sum_probs=116.7
Q ss_pred HHhccCC-CCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCCC
Q 043471 45 EVLSLLP-PYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 45 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~~ 119 (485)
.+++.+. ..++.+|||||||+|.++..++++ +.+|+|+|+|+.+++.|+++... .++++++++|+.+ ++++++
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~ 184 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD--TPFDKG 184 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--CCCCTT
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc--CCCCCC
Confidence 4667777 677899999999999999999998 89999999999999999987532 2479999999988 567789
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc-------CCCCCCCCChhHHHHHhhhcce
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR-------KHNPTHYREPRFYSKVFKECQI 192 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 192 (485)
+||+|+++.+++|++ ...+++++.++|||||++++.++.......... ........+.+.+.+.++++||
T Consensus 185 ~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 261 (312)
T 3vc1_A 185 AVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRL 261 (312)
T ss_dssp CEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTE
T ss_pred CEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCC
Confidence 999999999999994 678999999999999999998765443221100 0111234477889999999998
Q ss_pred ec
Q 043471 193 QD 194 (485)
Q Consensus 193 ~~ 194 (485)
..
T Consensus 262 ~~ 263 (312)
T 3vc1_A 262 VP 263 (312)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 107
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.75 E-value=1.4e-18 Score=157.85 Aligned_cols=172 Identities=13% Similarity=0.091 Sum_probs=122.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc----CC-CCCeEEEEccCCCCCCC
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI----GL-KCSVEFEVADCTKKTYP 346 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~----~~-~~~i~~~~~d~~~~~~~ 346 (485)
...++.+...++.+|||+|||+|.++..+++.. +.+|+|+|+|+.|++.+.++.. .. ..++++.++|+.+++++
T Consensus 17 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 96 (218)
T 3mq2_A 17 DAEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL 96 (218)
T ss_dssp HHHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC
T ss_pred HHHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC
Confidence 344555567788999999999999999999986 6799999999998886433221 11 23799999999999887
Q ss_pred CCCccEEEEc---ccc--cccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCC----HHHHHH
Q 043471 347 ENSFDVIYSR---DTI--LHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHD----VKSYGQ 417 (485)
Q Consensus 347 ~~~fD~i~~~---~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 417 (485)
+++ |.|+.. ... +|++++..++++++++|||||++++............... ..+..+ .+.+..
T Consensus 97 ~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~ 169 (218)
T 3mq2_A 97 SGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVG------EHPEPTPDSADEWLAP 169 (218)
T ss_dssp CCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGT------TCCCCCHHHHHHHHHH
T ss_pred CCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccc------cCCccchHHHHHHHHH
Confidence 666 766633 233 3778889999999999999999999643221111111110 111222 345778
Q ss_pred HHHhCCCeEEEEeecchHHHHHH-HHHHHHHHhcH
Q 043471 418 MLKDAGFVDIIAEDRTEQFVQVL-QRELDAIEKDK 451 (485)
Q Consensus 418 ~l~~aGf~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 451 (485)
+++++||++.+++....++...+ ..|..++...+
T Consensus 170 ~l~~aGf~i~~~~~~~~~~~~~~~~~w~~~~~~~r 204 (218)
T 3mq2_A 170 RYAEAGWKLADCRYLEPEEVAGLETSWTRRLHSSR 204 (218)
T ss_dssp HHHHTTEEEEEEEEECHHHHHHTCCTHHHHHTTCC
T ss_pred HHHHcCCCceeeeccchhhhhhhHHHHHHHHcccc
Confidence 99999999999998887776554 56777765443
No 108
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.75 E-value=9.9e-19 Score=163.81 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=111.1
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCCCC----------------------
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHFEN---------------------- 101 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~~~---------------------- 101 (485)
.++.. +..++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++....+.
T Consensus 48 ~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (265)
T 2i62_A 48 KIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGP 126 (265)
T ss_dssp HHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHH
T ss_pred HHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchH
Confidence 34443 556778999999999999999999887 999999999999999988754332
Q ss_pred ---------e-EEEEeeccCCCCCCCC---CCeeEEEhhhhhhccCh--HHHHHHHHHHHhhcccCcEEEEEeccCCCCC
Q 043471 102 ---------V-KFMCADVTSPDLTFSE---DSVDMMFSNWLLMYLSD--KEVEKLAERMVKWLKVGGYIFFRESCFHQSG 166 (485)
Q Consensus 102 ---------~-~~~~~d~~~~~~~~~~---~~~D~v~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 166 (485)
+ +++++|+.+.. ++++ ++||+|+++.+++|+.. +....+++++.++|+|||++++.+.......
T Consensus 127 ~~~~~l~~~v~~~~~~d~~~~~-~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~ 205 (265)
T 2i62_A 127 EKEEKLRRAIKQVLKCDVTQSQ-PLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYY 205 (265)
T ss_dssp HHHHHHHHHEEEEEECCTTSSS-TTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE
T ss_pred HHHHHhhhhheeEEEeeeccCC-CCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceE
Confidence 7 99999998743 2244 89999999999995532 2478999999999999999999875322100
Q ss_pred ccccCCCCCCCCChhHHHHHhhhcceecC
Q 043471 167 DSKRKHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
............+.+.+...++++||...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 206 MIGEQKFSSLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp EETTEEEECCCCCHHHHHHHHHHTTCEEE
T ss_pred EcCCccccccccCHHHHHHHHHHCCCEEE
Confidence 00001112233467899999999999543
No 109
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.75 E-value=8e-19 Score=166.68 Aligned_cols=146 Identities=19% Similarity=0.310 Sum_probs=110.9
Q ss_pred CCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-------------------------------
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK------------------------------- 330 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~------------------------------- 330 (485)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 57899999999999999999987 5799999999999999998764321
Q ss_pred ----------------------------CCeEEEEccCCCCC-----CCCCCccEEEEcccccccC------CHHHHHHH
Q 043471 331 ----------------------------CSVEFEVADCTKKT-----YPENSFDVIYSRDTILHIQ------DKPALFKS 371 (485)
Q Consensus 331 ----------------------------~~i~~~~~d~~~~~-----~~~~~fD~i~~~~~~~~~~------~~~~~l~~ 371 (485)
.++++.++|+...+ +.+++||+|+|..+++|+. +...+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 47999999998654 5678999999999998875 78899999
Q ss_pred HHhcCCCCcEEEEEecccCC----CCCChhHHHHHHhcCCCCCCHHHHHHHHHh--CCCeEEEEee
Q 043471 372 FFKWLKPGGTVLISDYCKSF----GTPSVEFSEYIKQRGYDLHDVKSYGQMLKD--AGFVDIIAED 431 (485)
Q Consensus 372 ~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--aGf~~~~~~~ 431 (485)
++++|||||+|++....... ............. ....++++.++|.+ +||+.+++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~---~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYR---IQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHH---CCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhc---EEEcHHHHHHHHHhcCCCceEEEEec
Confidence 99999999999997432210 1111111111111 12347889999999 9998877654
No 110
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=5.8e-18 Score=154.69 Aligned_cols=151 Identities=28% Similarity=0.379 Sum_probs=114.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccc--
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDT-- 358 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~-- 358 (485)
++++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+.++++..+|+.++++++++||+|++..+
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred cCCCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 345789999999999999999987 55999999999999999998765556899999999998887889999999999
Q ss_pred ccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCC---Ch--hHHHHHH----hc---------------C----CCCC
Q 043471 359 ILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTP---SV--EFSEYIK----QR---------------G----YDLH 410 (485)
Q Consensus 359 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---~~--~~~~~~~----~~---------------~----~~~~ 410 (485)
+++.++...++++++++|||||++++.++....... .. ....+.. +. + ...+
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 194 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNVW 194 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEEECC
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeehhhh
Confidence 555567889999999999999999998764211000 00 0000000 00 0 0112
Q ss_pred CHHHHHHHHHhCCCeEEEEeecc
Q 043471 411 DVKSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 411 ~~~~~~~~l~~aGf~~~~~~~~~ 433 (485)
. .++.++|+++||+.+.+....
T Consensus 195 ~-~~~~~~l~~~GF~~v~~~~~~ 216 (227)
T 1ve3_A 195 G-KTGVELLAKLYFTKEAEEKVG 216 (227)
T ss_dssp C-HHHHHHHHTTTEEEEEEEEET
T ss_pred c-hHHHHHHHHHhhhHHHHHHhC
Confidence 2 378999999999999987754
No 111
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.75 E-value=1.3e-17 Score=148.26 Aligned_cols=135 Identities=20% Similarity=0.298 Sum_probs=115.0
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccE
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDV 352 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 352 (485)
..+++.+ ++++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. ++.+..+|+.+.++++++||+
T Consensus 37 ~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 37 ARLIDAM-APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFP----EARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp HHHHHHH-SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTSCCCCCCEEE
T ss_pred HHHHHHh-ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCC----CCcEEEcccccCCCCCCceeE
Confidence 3455555 567889999999999999999988 7899999999999999999864 589999999998888889999
Q ss_pred EEEc-ccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEE
Q 043471 353 IYSR-DTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIA 429 (485)
Q Consensus 353 i~~~-~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 429 (485)
|++. .+++|++ +...+++++.++|+|||.+++..... ..++..++.++++++||+++..
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~------------------~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG------------------RGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT------------------SSCCHHHHHHHHHHHTEEEEEE
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC------------------CCcCHHHHHHHHHHcCCEEeee
Confidence 9998 7888884 56889999999999999999985432 1257889999999999999877
Q ss_pred ee
Q 043471 430 ED 431 (485)
Q Consensus 430 ~~ 431 (485)
..
T Consensus 173 ~~ 174 (195)
T 3cgg_A 173 FE 174 (195)
T ss_dssp ES
T ss_pred ec
Confidence 54
No 112
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=1.4e-18 Score=156.70 Aligned_cols=149 Identities=18% Similarity=0.171 Sum_probs=115.0
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccccc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTIL 360 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~ 360 (485)
..++.+|||+|||+|..+..++...+.+++|+|+|+.+++.|+++....+.++++.++|+.++++++++||+|++..+++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 45678999999999998544444447899999999999999999875444578999999999988889999999999999
Q ss_pred cc--CCHHHHHHHHHhcCCCCcEEEEEecccCCCCCC--hhHHH--H-----HHhcCCCCCCHHHHHHHHHhCCCeEEEE
Q 043471 361 HI--QDKPALFKSFFKWLKPGGTVLISDYCKSFGTPS--VEFSE--Y-----IKQRGYDLHDVKSYGQMLKDAGFVDIIA 429 (485)
Q Consensus 361 ~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--~~~~~--~-----~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 429 (485)
|+ .++..++++++++|||||++++.++........ ..+.. + ..+....+++.+++.++++++||...+.
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~ 180 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKED 180 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeee
Confidence 99 578899999999999999999998765432210 00000 0 0001114668899999999999977654
No 113
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.75 E-value=4e-18 Score=157.05 Aligned_cols=151 Identities=19% Similarity=0.245 Sum_probs=114.5
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEE
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVI 353 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i 353 (485)
.++.... .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++.. ++++..+|+.++++ +++||+|
T Consensus 32 ~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~----~~~~~~~d~~~~~~-~~~~D~v 104 (239)
T 3bxo_A 32 DLVRSRT-PEASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRLP----DATLHQGDMRDFRL-GRKFSAV 104 (239)
T ss_dssp HHHHHHC-TTCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHCT----TCEEEECCTTTCCC-SSCEEEE
T ss_pred HHHHHhc-CCCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhCC----CCEEEECCHHHccc-CCCCcEE
Confidence 3344332 66789999999999999999988 4599999999999999998863 68999999998876 6789999
Q ss_pred EE-cccccccC---CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhH----------------------------HHH
Q 043471 354 YS-RDTILHIQ---DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEF----------------------------SEY 401 (485)
Q Consensus 354 ~~-~~~~~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~----------------------------~~~ 401 (485)
+| ..+++|++ +...++++++++|||||++++.++........... ..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (239)
T 3bxo_A 105 VSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHF 184 (239)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEE
Confidence 96 45999995 45789999999999999999987554332110000 000
Q ss_pred H-H-----------hcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 402 I-K-----------QRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 402 ~-~-----------~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
. . .....+++.+++.++|+++||+++.+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~ 226 (239)
T 3bxo_A 185 TVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEG 226 (239)
T ss_dssp EEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESS
T ss_pred EEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEc
Confidence 0 0 0012467899999999999998776643
No 114
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.75 E-value=5.1e-18 Score=161.93 Aligned_cols=120 Identities=19% Similarity=0.262 Sum_probs=101.1
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC-----CCeEEEEeeccCCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF-----ENVKFMCADVTSPD 113 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~ 113 (485)
.......+++.+....+ +|||||||+|.++..|++.+.+|+|+|+|+.+++.|+++.... .+++++++|+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-- 144 (299)
T 3g2m_A 68 GTSEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA-- 144 (299)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB--
T ss_pred ccHHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc--
Confidence 34556677777765444 9999999999999999999999999999999999999986543 479999999998
Q ss_pred CCCCCCCeeEEEh-hhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 114 LTFSEDSVDMMFS-NWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 114 ~~~~~~~~D~v~~-~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
+++ +++||+|++ ..+++|++++....+++++.++|+|||.+++..+..
T Consensus 145 ~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 145 FAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp CCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 444 689998885 567888887668899999999999999999987654
No 115
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.75 E-value=4.5e-18 Score=152.54 Aligned_cols=151 Identities=16% Similarity=0.176 Sum_probs=117.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCc
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSF 350 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~f 350 (485)
.+..++..+ +++ +|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+.++.+..+|+.+.++++++|
T Consensus 20 ~l~~~~~~~--~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~f 95 (202)
T 2kw5_A 20 FLVSVANQI--PQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAW 95 (202)
T ss_dssp SHHHHHHHS--CSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTC
T ss_pred HHHHHHHhC--CCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCc
Confidence 344555554 456 9999999999999999987 789999999999999999987644447999999999988888899
Q ss_pred cEEEEccccccc--CCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 351 DVIYSRDTILHI--QDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 351 D~i~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
|+|++.. .|+ .+...+++++.++|||||.+++.++...... ............++.+++.++|+ ||+++.
T Consensus 96 D~v~~~~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 96 EGIVSIF--CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ----YNTGGPKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp SEEEEEC--CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGG----GTSCCSSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred cEEEEEh--hcCCHHHHHHHHHHHHHhcCCCcEEEEEEecccccc----CCCCCCCcceeecCHHHHHHHhc--CceEEE
Confidence 9999954 344 4688999999999999999999976543211 00000011124689999999999 999998
Q ss_pred Eeecc
Q 043471 429 AEDRT 433 (485)
Q Consensus 429 ~~~~~ 433 (485)
++...
T Consensus 168 ~~~~~ 172 (202)
T 2kw5_A 168 ANNLE 172 (202)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76644
No 116
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.74 E-value=3.4e-18 Score=162.31 Aligned_cols=143 Identities=12% Similarity=0.083 Sum_probs=102.3
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCCCC-------------------------------
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGHFE------------------------------- 100 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~~~------------------------------- 100 (485)
.++.+|||||||+|..+..++.. +.+|+|+|+|+.|++.|+++....+
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 36789999999999966555553 6799999999999999988653211
Q ss_pred -CeEEEEeeccC-CCC---CCCCCCeeEEEhhhhhhccCh--HHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCC
Q 043471 101 -NVKFMCADVTS-PDL---TFSEDSVDMMFSNWLLMYLSD--KEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHN 173 (485)
Q Consensus 101 -~~~~~~~d~~~-~~~---~~~~~~~D~v~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~ 173 (485)
.++++++|+.. .++ .+++++||+|+++.+++|+.. ++...+++++.++|||||++++................
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 14677778876 322 245677999999999999542 24789999999999999999997532211000001111
Q ss_pred CCCCCChhHHHHHhhhcceecC
Q 043471 174 PTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
+....+.+.+.+.++++||...
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEE
Confidence 2334578899999999999653
No 117
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.74 E-value=1.2e-17 Score=160.87 Aligned_cols=149 Identities=13% Similarity=0.125 Sum_probs=119.8
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~ 118 (485)
...+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++.... ++++++++|+.+ ++
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~--- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED--FA--- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG--CC---
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH--CC---
Confidence 356778888888999999999999999999988 899999999999999999876432 469999999977 32
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc-------------------cCCCCCCCCC
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK-------------------RKHNPTHYRE 179 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-------------------~~~~~~~~~~ 179 (485)
++||+|++..+++|++++....+++++.++|+|||.+++.++......... .........+
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 233 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPS 233 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCC
Confidence 789999999999999765588999999999999999999887654321100 0011133447
Q ss_pred hhHHHHHhhhcceecCC
Q 043471 180 PRFYSKVFKECQIQDAS 196 (485)
Q Consensus 180 ~~~~~~~~~~~~~~~~~ 196 (485)
.+.+.+.++++||....
T Consensus 234 ~~~~~~~l~~aGf~~~~ 250 (318)
T 2fk8_A 234 TEMMVEHGEKAGFTVPE 250 (318)
T ss_dssp HHHHHHHHHHTTCBCCC
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 88999999999996644
No 118
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.74 E-value=1.4e-17 Score=150.41 Aligned_cols=139 Identities=19% Similarity=0.225 Sum_probs=111.1
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCC-EEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCcc
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDV-HVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFD 351 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 351 (485)
..++..+.. ++.+|||+|||+|.++..+ +. +++|+|+|+.+++.++++. .++++..+|+.++++++++||
T Consensus 27 ~~~l~~~~~-~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD 97 (211)
T 2gs9_A 27 ERALKGLLP-PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFD 97 (211)
T ss_dssp HHHHHTTCC-CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEE
T ss_pred HHHHHHhcC-CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEE
Confidence 345555543 7889999999999998877 55 9999999999999999986 378999999999998889999
Q ss_pred EEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHH-----hcCCCCCCHHHHHHHHHhCC
Q 043471 352 VIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIK-----QRGYDLHDVKSYGQMLKDAG 423 (485)
Q Consensus 352 ~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~aG 423 (485)
+|++..+++|++++..+++++.++|||||.+++.++...... ......... ..+..+++.+++.++|+ |
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 98 VVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALSPW-AALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSHH-HHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred EEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCcH-HHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 999999999999999999999999999999999976543210 000111101 11245689999999999 7
No 119
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.74 E-value=8.1e-18 Score=150.83 Aligned_cols=145 Identities=15% Similarity=0.139 Sum_probs=111.0
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC-CCeEEEEeeccCCCCCCCCC
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF-ENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~~ 119 (485)
+....++..++ ++ +|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++.... .+++++++|+.+ ++++++
T Consensus 19 ~~l~~~~~~~~--~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~~ 93 (202)
T 2kw5_A 19 DFLVSVANQIP--QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLAD--FDIVAD 93 (202)
T ss_dssp SSHHHHHHHSC--SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTT--BSCCTT
T ss_pred HHHHHHHHhCC--CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhh--cCCCcC
Confidence 34455555543 35 9999999999999999999999999999999999999875321 279999999988 556778
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCc-cccCCCCCCCCChhHHHHHhhhcceec
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGD-SKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
+||+|+++ +.|++......+++++.++|+|||.+++.+........ .........+.+++.+..+++ ||..
T Consensus 94 ~fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v 165 (202)
T 2kw5_A 94 AWEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNW 165 (202)
T ss_dssp TCSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCE
T ss_pred CccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceE
Confidence 99999985 45666556889999999999999999998776433211 111122345568889999998 7743
No 120
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=1.7e-17 Score=153.55 Aligned_cols=147 Identities=15% Similarity=0.217 Sum_probs=113.7
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCC-----CCccEEEE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPE-----NSFDVIYS 355 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~-----~~fD~i~~ 355 (485)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..+++++++|+.+.+... .+||+|++
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc--ccCceEEECcccccccccccccccCccEEEE
Confidence 567889999999999999999988 4599999999999999999873 237999999998865321 24999999
Q ss_pred cccccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCC-----------CCChhHHHHHHhc-CCCCCCHHHHHHHHHh
Q 043471 356 RDTILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFG-----------TPSVEFSEYIKQR-GYDLHDVKSYGQMLKD 421 (485)
Q Consensus 356 ~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 421 (485)
..+++|++ +...++++++++|||||++++.++..... .+........... .....+.+++.+++
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 208 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF-- 208 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--
Confidence 99999998 88999999999999999999988754321 1111111111111 11235889999999
Q ss_pred CCCeEEEEeec
Q 043471 422 AGFVDIIAEDR 432 (485)
Q Consensus 422 aGf~~~~~~~~ 432 (485)
+||+++.....
T Consensus 209 aGf~~~~~~~~ 219 (245)
T 3ggd_A 209 PDFEILSQGEG 219 (245)
T ss_dssp TTEEEEEEECC
T ss_pred CCCEEEecccc
Confidence 99999876543
No 121
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.74 E-value=8e-18 Score=160.79 Aligned_cols=146 Identities=11% Similarity=0.097 Sum_probs=116.7
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~~ 119 (485)
..+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... ..+++++++|+.++ ++
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~ 136 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----DE 136 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----CC
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----CC
Confidence 45778888888999999999999999999998 89999999999999999987543 23799999999873 58
Q ss_pred CeeEEEhhhhhhccCh-------HHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc-------------------CCC
Q 043471 120 SVDMMFSNWLLMYLSD-------KEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR-------------------KHN 173 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-------------------~~~ 173 (485)
+||+|+++.+++|+++ .....+++++.++|||||.+++.++.......... ...
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 216 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFP 216 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCT
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCC
Confidence 9999999999999943 45789999999999999999998776542211000 011
Q ss_pred CCCCCChhHHHHHhhhcceec
Q 043471 174 PTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~ 194 (485)
.....+.+.+...++++||..
T Consensus 217 ~~~~~s~~~~~~~l~~aGf~~ 237 (302)
T 3hem_A 217 GGRLPRISQVDYYSSNAGWKV 237 (302)
T ss_dssp TCCCCCHHHHHHHHHHHTCEE
T ss_pred CCCCCCHHHHHHHHHhCCcEE
Confidence 124456788889999999843
No 122
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.74 E-value=9.1e-18 Score=151.59 Aligned_cols=133 Identities=17% Similarity=0.224 Sum_probs=105.4
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeE
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDM 123 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~ 123 (485)
.++..+.. ++.+|||||||+|.++..+ +. +|+|+|+|+.+++.++++. ++++++++|+.+ +++++++||+
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~--~~~~~~~fD~ 98 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---PEATWVRAWGEA--LPFPGESFDV 98 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---TTSEEECCCTTS--CCSCSSCEEE
T ss_pred HHHHHhcC-CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---CCcEEEEccccc--CCCCCCcEEE
Confidence 44555444 7889999999999999888 66 9999999999999999986 589999999988 5677889999
Q ss_pred EEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCc--------c-ccCCCCCCCCChhHHHHHhh
Q 043471 124 MFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGD--------S-KRKHNPTHYREPRFYSKVFK 188 (485)
Q Consensus 124 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~ 188 (485)
|++..+++|+++ ..++++++.++|+|||.+++.++....... . .......++.+++.+.++++
T Consensus 99 v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 99 VLLFTTLEFVED--VERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp EEEESCTTTCSC--HHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred EEEcChhhhcCC--HHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc
Confidence 999999999987 669999999999999999998775432100 0 00011233347888888887
No 123
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.74 E-value=2.2e-17 Score=151.06 Aligned_cols=146 Identities=15% Similarity=0.196 Sum_probs=116.2
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCC
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDS 120 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 120 (485)
.....+++.+. .++.+|||||||+|..+..+++.+.+|+|+|+|+.+++.++++. .+++++|+.+...++++++
T Consensus 20 ~~~~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 20 AVNPNLLKHIK-KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-----DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp CCCHHHHTTCC-TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-----SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-----CcEEEcchhhcCCCCCCCc
Confidence 34456777776 67889999999999999999988889999999999999998864 3789999987556677889
Q ss_pred eeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCC---------Cccc-----cCCCCCCCCChhHHHHH
Q 043471 121 VDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQS---------GDSK-----RKHNPTHYREPRFYSKV 186 (485)
Q Consensus 121 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~---------~~~~-----~~~~~~~~~~~~~~~~~ 186 (485)
||+|+++.+++|+++ ...+++++.++|+|||.+++..+..... .... .........+.+.+.++
T Consensus 94 fD~v~~~~~l~~~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFD--PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRM 171 (230)
T ss_dssp EEEEEEESCGGGSSC--HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHH
T ss_pred cCEEEECChhhhcCC--HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHH
Confidence 999999999999987 4699999999999999999987653211 0000 01112234578899999
Q ss_pred hhhcceec
Q 043471 187 FKECQIQD 194 (485)
Q Consensus 187 ~~~~~~~~ 194 (485)
++++||..
T Consensus 172 l~~~Gf~~ 179 (230)
T 3cc8_A 172 FLKAGYSI 179 (230)
T ss_dssp HHHTTEEE
T ss_pred HHHcCCeE
Confidence 99999954
No 124
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.74 E-value=6.7e-17 Score=158.22 Aligned_cols=158 Identities=22% Similarity=0.325 Sum_probs=126.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~~ 347 (485)
....+++.+.+.++.+|||||||+|.++..+++++ +.+++++|+ +.+++.|++++.. ...+++++.+|+.+.++++
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE 256 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC
Confidence 45677888888888999999999999999999987 679999999 9999999998763 4456999999999877654
Q ss_pred CCccEEEEcccccccCC--HHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHH---HHH-hcCC----CCCCHHHHHH
Q 043471 348 NSFDVIYSRDTILHIQD--KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSE---YIK-QRGY----DLHDVKSYGQ 417 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~---~~~-~~~~----~~~~~~~~~~ 417 (485)
+|+|++..+++|+++ ...++++++++|||||++++.+...... ....+.. ... ..+. .+++.++|.+
T Consensus 257 --~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ 333 (359)
T 1x19_A 257 --ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP-ENPNFDYLSHYILGAGMPFSVLGFKEQARYKE 333 (359)
T ss_dssp --CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT-TSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHH
T ss_pred --CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC-CCchHHHHHHHHHhcCCCCcccCCCCHHHHHH
Confidence 499999999999987 7889999999999999999988765443 1111111 111 1111 2378999999
Q ss_pred HHHhCCCeEEEEeec
Q 043471 418 MLKDAGFVDIIAEDR 432 (485)
Q Consensus 418 ~l~~aGf~~~~~~~~ 432 (485)
+|+++||+++.+...
T Consensus 334 ll~~aGf~~v~~~~~ 348 (359)
T 1x19_A 334 ILESLGYKDVTMVRK 348 (359)
T ss_dssp HHHHHTCEEEEEEEE
T ss_pred HHHHCCCceEEEEec
Confidence 999999999887654
No 125
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.74 E-value=6.7e-18 Score=158.11 Aligned_cols=148 Identities=14% Similarity=0.078 Sum_probs=114.6
Q ss_pred CCCCCCEEEEECCCCChhHHHHhhcCCC-EEEEEeCCHHHHHHHHHHhcCCCC---------------------------
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMADKFDV-HVVGIDLSINMISFALERAIGLKC--------------------------- 331 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~--------------------------- 331 (485)
...++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.|++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 4456789999999999999988877 55 999999999999999998764321
Q ss_pred ---Ce-EEEEccCCCCC-CCC---CCccEEEEccccc----ccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHH
Q 043471 332 ---SV-EFEVADCTKKT-YPE---NSFDVIYSRDTIL----HIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFS 399 (485)
Q Consensus 332 ---~i-~~~~~d~~~~~-~~~---~~fD~i~~~~~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 399 (485)
++ .+..+|+.+.+ +++ ++||+|++..+++ +++++..+++++.++|||||++++.+......... .
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~---~ 208 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMI---G 208 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEE---T
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEc---C
Confidence 17 89999998864 355 7899999999999 55578899999999999999999987543210000 0
Q ss_pred HHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeecc
Q 043471 400 EYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 433 (485)
.........+.+++.++|+++||+++.+....
T Consensus 209 --~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 209 --EQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp --TEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred --CccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 00011235678899999999999999887654
No 126
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.74 E-value=6.2e-18 Score=158.14 Aligned_cols=104 Identities=24% Similarity=0.301 Sum_probs=93.7
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC-CCCCeEEEEeeccCCCCCCCCCCeeEEEhhhh
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG-HFENVKFMCADVTSPDLTFSEDSVDMMFSNWL 129 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~ 129 (485)
...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++.. ..++++++++|+.+ +++++++||+|+++.+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARA--IPLPDESVHGVIVVHL 113 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTS--CCSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEccccc--CCCCCCCeeEEEECCc
Confidence 45678899999999999999999999999999999999999999862 23589999999987 5677889999999999
Q ss_pred hhccChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 130 LMYLSDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 130 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
++|+++ ...+++++.++|+|||.+++.
T Consensus 114 l~~~~~--~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 114 WHLVPD--WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGGCTT--HHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcCC--HHHHHHHHHHHCCCCcEEEEE
Confidence 999987 669999999999999999987
No 127
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.74 E-value=3.5e-17 Score=160.24 Aligned_cols=148 Identities=14% Similarity=0.188 Sum_probs=118.3
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCC--CCCCCCccEEEEc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKK--TYPENSFDVIYSR 356 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~--~~~~~~fD~i~~~ 356 (485)
....+|||||||+|.++..+++++ +.+++++|+ +.+++.|++++...+ .+++++.+|+.+. |++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 456799999999999999999976 679999999 999999999986443 5799999999886 465 789999999
Q ss_pred ccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCCChhH------HHHH---HhcCCCCCCHHHHHHHHHhCCCe
Q 043471 357 DTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEF------SEYI---KQRGYDLHDVKSYGQMLKDAGFV 425 (485)
Q Consensus 357 ~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~l~~aGf~ 425 (485)
.++|++++. ..+|++++++|||||++++.+............ ...+ ...+...++.++|.++|+++||+
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~ 335 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLE 335 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCe
Confidence 999999764 578999999999999999998766554332210 1111 11223467999999999999999
Q ss_pred EEEEee
Q 043471 426 DIIAED 431 (485)
Q Consensus 426 ~~~~~~ 431 (485)
++.+..
T Consensus 336 ~v~~~~ 341 (363)
T 3dp7_A 336 VEEIQD 341 (363)
T ss_dssp ESCCCC
T ss_pred EEEEEe
Confidence 887654
No 128
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.73 E-value=4.6e-18 Score=160.91 Aligned_cols=119 Identities=16% Similarity=0.295 Sum_probs=101.4
Q ss_pred cChhhhHHHhccC-CCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCC
Q 043471 38 LDKEERPEVLSLL-PPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSP 112 (485)
Q Consensus 38 ~~~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~ 112 (485)
+.+.....+++.+ ...++.+|||||||+|..+..+++. +.+|+|+|+|+.+++.|+++....+ +++++++|+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~- 83 (284)
T 3gu3_A 5 YNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE- 83 (284)
T ss_dssp CCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTT-
T ss_pred cchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhh-
Confidence 3445556666665 4567889999999999999999987 5799999999999999999865433 89999999998
Q ss_pred CCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 113 DLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 113 ~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+++ +++||+|++..+++|+++ ...++++++++|+|||++++.++.
T Consensus 84 -~~~-~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 84 -IEL-NDKYDIAICHAFLLHMTT--PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -CCC-SSCEEEEEEESCGGGCSS--HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -cCc-CCCeeEEEECChhhcCCC--HHHHHHHHHHHcCCCCEEEEEecc
Confidence 554 469999999999999988 569999999999999999998876
No 129
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=4.8e-19 Score=162.68 Aligned_cols=106 Identities=20% Similarity=0.175 Sum_probs=91.9
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC--CCCCCCccEEEE---
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK--TYPENSFDVIYS--- 355 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~i~~--- 355 (485)
..+|.+|||||||+|..+..+++..+.+++|||+|+.+++.|+++....+.++.++.+|.... ++++++||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 467889999999999999999987667999999999999999999887777888888887653 467889999974
Q ss_pred --cccccccCCHHHHHHHHHhcCCCCcEEEEEe
Q 043471 356 --RDTILHIQDKPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 356 --~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
...++|..++..++++++|+|||||+|++.+
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 5667788899999999999999999998864
No 130
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.73 E-value=3.6e-17 Score=155.53 Aligned_cols=114 Identities=22% Similarity=0.361 Sum_probs=97.0
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCC-----CCCeEEEEccCCCCC---
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGL-----KCSVEFEVADCTKKT--- 344 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~-----~~~i~~~~~d~~~~~--- 344 (485)
..+.+.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++.... ..++.+..+|+..++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc
Confidence 34444444557789999999999999999988 779999999999999998875211 136788899988877
Q ss_pred CCCCCccEEEEc-ccccccCC-------HHHHHHHHHhcCCCCcEEEEEec
Q 043471 345 YPENSFDVIYSR-DTILHIQD-------KPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 345 ~~~~~fD~i~~~-~~~~~~~~-------~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
+++++||+|+|. .+++|+++ +..++++++++|||||++++..+
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 778999999998 89999999 99999999999999999999864
No 131
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.73 E-value=3.8e-17 Score=159.63 Aligned_cols=157 Identities=18% Similarity=0.168 Sum_probs=124.6
Q ss_pred HHHHHHHcCCCC-CCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCC-CC
Q 043471 272 TKEFVAKLDLKP-GQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKT-YP 346 (485)
Q Consensus 272 ~~~~~~~~~~~~-~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~-~~ 346 (485)
+..+++.+.+.+ +.+|||||||+|.++..+++++ +.+++++|+ +.+++.|+++... ...++++..+|+.+.+ +.
T Consensus 167 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 167 MVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT
T ss_pred HHHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC
Confidence 346777777777 8899999999999999999886 679999999 8899999988753 3457999999998875 13
Q ss_pred CCCccEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHH---HH---HhcCCCCCCHHHHHHH
Q 043471 347 ENSFDVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSE---YI---KQRGYDLHDVKSYGQM 418 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~ 418 (485)
.++||+|++..++||+++. ..++++++++|||||++++.+.............. .. ...+...++.++|.++
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 325 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGV 325 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHH
Confidence 4679999999999999765 88999999999999999999876655432221111 11 1123456789999999
Q ss_pred HHhCCCeEEEE
Q 043471 419 LKDAGFVDIIA 429 (485)
Q Consensus 419 l~~aGf~~~~~ 429 (485)
|+++||++++.
T Consensus 326 l~~aGf~~~~~ 336 (352)
T 3mcz_A 326 VRDAGLAVGER 336 (352)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCceeee
Confidence 99999999874
No 132
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.73 E-value=7.8e-17 Score=158.78 Aligned_cols=158 Identities=22% Similarity=0.227 Sum_probs=122.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~~~ 348 (485)
...+++.+.+.++.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++.. +..++++..+|+.+ +++.
T Consensus 171 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~- 247 (374)
T 1qzz_A 171 YEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV- 247 (374)
T ss_dssp THHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-
T ss_pred HHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-
Confidence 4567777778888999999999999999999887 679999999 9999999998753 44579999999976 4443
Q ss_pred CccEEEEcccccccCCHH--HHHHHHHhcCCCCcEEEEEec--ccCCCCCChhHHHHH-----HhcCCCCCCHHHHHHHH
Q 043471 349 SFDVIYSRDTILHIQDKP--ALFKSFFKWLKPGGTVLISDY--CKSFGTPSVEFSEYI-----KQRGYDLHDVKSYGQML 419 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l 419 (485)
.||+|++..++||+++.. .++++++++|||||++++.+. ..+... ...+.... ...+...++.++|.++|
T Consensus 248 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 326 (374)
T 1qzz_A 248 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGA-DRFFSTLLDLRMLTFMGGRVRTRDEVVDLA 326 (374)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH--------HHHHHHHHHHHHHHHSCCCCCHHHHHHHH
T ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCC-CcchhhhcchHHHHhCCCcCCCHHHHHHHH
Confidence 499999999999998764 899999999999999999987 432221 11111111 11234567999999999
Q ss_pred HhCCCeEEEEeecc
Q 043471 420 KDAGFVDIIAEDRT 433 (485)
Q Consensus 420 ~~aGf~~~~~~~~~ 433 (485)
+++||+++.+....
T Consensus 327 ~~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 327 GSAGLALASERTSG 340 (374)
T ss_dssp HTTTEEEEEEEEEC
T ss_pred HHCCCceEEEEECC
Confidence 99999998876543
No 133
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.73 E-value=6.2e-18 Score=161.22 Aligned_cols=108 Identities=17% Similarity=0.283 Sum_probs=92.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCCCC-CCCCeeEEEh
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDLTF-SEDSVDMMFS 126 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~-~~~~~D~v~~ 126 (485)
..++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++.... .+++++++|+.+ +++ ++++||+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG--RHMDLGKEFDVISS 139 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT--SCCCCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc--cccCCCCCcCEEEE
Confidence 35678999999999999999988876 9999999999999999886533 368999999988 445 5789999999
Q ss_pred hhhhhc--cChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 127 NWLLMY--LSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 127 ~~~~~~--~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
..+++| ........+++++.++|+|||.+++..+.
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 999988 44555789999999999999999998765
No 134
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.73 E-value=4.9e-18 Score=161.38 Aligned_cols=153 Identities=16% Similarity=0.133 Sum_probs=110.0
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCC-------CeEEEEccCCC------C--CCC
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKC-------SVEFEVADCTK------K--TYP 346 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~-------~i~~~~~d~~~------~--~~~ 346 (485)
+++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++....+. ++++.+.|+.. + +++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 35789999999999877666655457999999999999999998754322 25677887722 2 356
Q ss_pred CCCccEEEEccccccc---CCHHHHHHHHHhcCCCCcEEEEEecccCCCC--------------C-ChhHH-------HH
Q 043471 347 ENSFDVIYSRDTILHI---QDKPALFKSFFKWLKPGGTVLISDYCKSFGT--------------P-SVEFS-------EY 401 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--------------~-~~~~~-------~~ 401 (485)
+++||+|+|..++||+ .+...++++++++|||||+++++++....-. . ...+. +.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 7899999999999876 4678999999999999999999876421100 0 00000 00
Q ss_pred ---HHhcC------CCCCCHHHHHHHHHhCCCeEEEEeecch
Q 043471 402 ---IKQRG------YDLHDVKSYGQMLKDAGFVDIIAEDRTE 434 (485)
Q Consensus 402 ---~~~~~------~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 434 (485)
..+.+ ..+.+.+++.++++++||+++.......
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~~ 248 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFAT 248 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHHH
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChHH
Confidence 00111 1256778999999999999998876554
No 135
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.73 E-value=1.1e-17 Score=150.82 Aligned_cols=141 Identities=18% Similarity=0.240 Sum_probs=108.9
Q ss_pred CCCCcEEEEcCCCCcch-HHHHhhcCcEEEEeCChHHHHHHHHHcCC-CCCeEEEEeeccCCCCCCCCCCeeEEEhhhhh
Q 043471 53 YEGKTVLEFGAGIGRFT-GELAKKAGHVIALDFIDSVIKKNEEVNGH-FENVKFMCADVTSPDLTFSEDSVDMMFSNWLL 130 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~-~~l~~~~~~v~giD~s~~~~~~a~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~ 130 (485)
.++.+|||+|||+|..+ ..+++.+.+|+|+|+|+.+++.|+++... ..+++++++|+.+ +++++++||+|++..++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRK--LPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTS--CCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhh--CCCCCCceeEEEEcChH
Confidence 45789999999999985 45556688999999999999999987432 2479999999988 55678899999999999
Q ss_pred hccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc------------cCCCC--CCCCChhHHHHHhhhcceecC
Q 043471 131 MYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK------------RKHNP--THYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (485)
+|++.+....+++++.++|+|||.+++.+.......... ....+ ..+.+.+.+..+|...|+...
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~ 178 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFK 178 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceee
Confidence 999766688999999999999999999877643321100 00111 133467788899998887543
No 136
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.72 E-value=3.3e-17 Score=148.44 Aligned_cols=108 Identities=19% Similarity=0.294 Sum_probs=96.6
Q ss_pred HcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcc
Q 043471 278 KLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRD 357 (485)
Q Consensus 278 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~ 357 (485)
.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ ++++.++|+.+.+ ++++||+|++..
T Consensus 46 ~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~ 122 (216)
T 3ofk_A 46 SLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFS-TAELFDLIVVAE 122 (216)
T ss_dssp HTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCC-CSCCEEEEEEES
T ss_pred HcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCC-CCCCccEEEEcc
Confidence 456677889999999999999999988 5799999999999999999987544 8999999999987 678999999999
Q ss_pred cccccCCH---HHHHHHHHhcCCCCcEEEEEecc
Q 043471 358 TILHIQDK---PALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 358 ~~~~~~~~---~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+++|++++ ..+++++.++|||||.+++.++.
T Consensus 123 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 123 VLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp CGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 99999987 46799999999999999998653
No 137
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.72 E-value=4.9e-17 Score=158.35 Aligned_cols=154 Identities=16% Similarity=0.146 Sum_probs=118.8
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHh--cCCCCCeEEEEccCCCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERA--IGLKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~--~~~~~~i~~~~~d~~~~~~~~~ 348 (485)
...+++.+.+.++.+|||||||+|.++..+++++ +.+++++|+ +.++. +++. .+...+++++.+|+. .+++
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p-- 246 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP-- 246 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-CCCC--
Confidence 4467788888888999999999999999999876 679999999 44444 2222 234567999999997 4555
Q ss_pred CccEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCCCh--hHHHH--HHhcCCCCCCHHHHHHHHHhC
Q 043471 349 SFDVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTPSV--EFSEY--IKQRGYDLHDVKSYGQMLKDA 422 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~l~~a 422 (485)
+||+|++..++||+++. ..+|++++++|||||++++.+.......... ..... ....+...++.++|.++|+++
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 326 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAA 326 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHT
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHC
Confidence 89999999999999877 6999999999999999999987655432221 11111 112234567899999999999
Q ss_pred CCeEEEEee
Q 043471 423 GFVDIIAED 431 (485)
Q Consensus 423 Gf~~~~~~~ 431 (485)
||+++++..
T Consensus 327 Gf~~~~~~~ 335 (348)
T 3lst_A 327 GLRLDRVVG 335 (348)
T ss_dssp TEEEEEEEE
T ss_pred CCceEEEEE
Confidence 999998865
No 138
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.72 E-value=4.2e-18 Score=162.07 Aligned_cols=122 Identities=19% Similarity=0.177 Sum_probs=103.0
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC---C---CCCeEEEEeeccC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG---H---FENVKFMCADVTS 111 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~---~---~~~~~~~~~d~~~ 111 (485)
.....++.+.+.+...++.+|||||||+|..+..|++.+.+|+|+|+|+.|++.|+++.. . ..++.+..+|+..
T Consensus 41 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred hHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 344566677777766778899999999999999999999999999999999999987641 1 1378899999877
Q ss_pred CCCC---CCCCCeeEEEhh-hhhhccCh-----HHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 112 PDLT---FSEDSVDMMFSN-WLLMYLSD-----KEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 112 ~~~~---~~~~~~D~v~~~-~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++ +++++||+|+|. .+++|+++ ....+++++++++|||||++++..++
T Consensus 121 --~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 121 --LDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp --HHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred --CccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 44 678899999998 79999987 56789999999999999999998764
No 139
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.72 E-value=2.8e-18 Score=156.09 Aligned_cols=162 Identities=16% Similarity=0.165 Sum_probs=106.7
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCC-HHHHHHH---HHHhcCCC-CCeEEEEccCCCCCCC-CCCccEE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLS-INMISFA---LERAIGLK-CSVEFEVADCTKKTYP-ENSFDVI 353 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s-~~~~~~a---~~~~~~~~-~~i~~~~~d~~~~~~~-~~~fD~i 353 (485)
..++.+|||||||+|.++..++++. +.+|+|+|+| +.|++.| +++....+ .++.+.++|+.++|.. .+.+|.|
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEE
Confidence 4577899999999999999998654 6799999999 7777776 66554333 3799999999988521 1334444
Q ss_pred EEccccc----c-cCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHH-----HHHHHHHhCC
Q 043471 354 YSRDTIL----H-IQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVK-----SYGQMLKDAG 423 (485)
Q Consensus 354 ~~~~~~~----~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~aG 423 (485)
+++.... + ..+...++++++|+|||||++++....... .....+. ..+.+.++.. ++.++++++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~el~~~l~~aG 176 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDS-YEEAEIK----KRGLPLLSKAYFLSEQYKAELSNSG 176 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-------------------CCHHHHHSHHHHHHHHHHT
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEecccc-chhchhh----hcCCCCCChhhcchHHHHHHHHHcC
Confidence 4433211 1 134567899999999999999994322221 1100000 0011222222 4899999999
Q ss_pred CeEEEEeecchHHHHHH-HHHHHHH
Q 043471 424 FVDIIAEDRTEQFVQVL-QRELDAI 447 (485)
Q Consensus 424 f~~~~~~~~~~~~~~~~-~~~~~~~ 447 (485)
|++...+....+|..++ ..|...+
T Consensus 177 f~v~~~~~~~~~~~~~~~~~w~~~~ 201 (225)
T 3p2e_A 177 FRIDDVKELDNEYVKQFNSLWAKRL 201 (225)
T ss_dssp CEEEEEEEECHHHHTTCCSHHHHHH
T ss_pred CCeeeeeecCHHHHHHHHHHHhccc
Confidence 99999999998887666 4455544
No 140
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.72 E-value=4.5e-17 Score=159.26 Aligned_cols=332 Identities=16% Similarity=0.202 Sum_probs=187.3
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 118 (485)
+.....-+++.+... +.+||.++-+-|.++..++.. .+|+.+.-|.-..+..+. ++- ...+ ... +..+.
T Consensus 31 ~~~~~~~l~~~~~~~-~~~~l~~n~~~g~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~--~~~~-~~~-----~~~~~ 99 (381)
T 3dmg_A 31 RDPVHDLLQKTVEPF-GERALDLNPGVGWGSLPLEGR-MAVERLETSRAAFRCLTA-SGL--QARL-ALP-----WEAAA 99 (381)
T ss_dssp SCHHHHHHHTTCCCC-SSEEEESSCTTSTTTGGGBTT-BEEEEEECBHHHHHHHHH-TTC--CCEE-CCG-----GGSCT
T ss_pred CChHHHHHHHHHHHh-CCcEEEecCCCCccccccCCC-CceEEEeCcHHHHHHHHH-cCC--Cccc-cCC-----ccCCc
Confidence 335555667776654 468999999999988887533 677877656555444333 221 1222 111 21235
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhh-cceecCCC
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKE-CQIQDASG 197 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g 197 (485)
..||+|+.... .+=.....+..|.++.+.|+|||.|++.-.... ..+.+...++. .+. +
T Consensus 100 ~~~d~v~~~~P-k~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~---------------g~~~~~~~~~~~~~~----~ 159 (381)
T 3dmg_A 100 GAYDLVVLALP-AGRGTAYVQASLVAAARALRMGGRLYLAGDKNK---------------GFERYFKEARALLGY----G 159 (381)
T ss_dssp TCEEEEEEECC-GGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGG---------------THHHHHHHHHHHHSC----E
T ss_pred CCCCEEEEECC-cchhHHHHHHHHHHHHHhCCCCCEEEEEEccHH---------------HHHHHHHHHHhhhcc----c
Confidence 68999886431 111112357888999999999999988533211 22333333331 111 0
Q ss_pred CceeEEEeeeeecceEEeecCchhHHHHHHHHhhccCchhHHHhhhhhhccccchhHHHHHhccccccCCc-h----HHH
Q 043471 198 NSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGG-I----ETT 272 (485)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~ 272 (485)
..... .....+ ..+....... .....|..+ .+...+ ..+.-....+.+.... . ...
T Consensus 160 ~~~~~-~~~~r~-~~~~~~~~~p------------~~~~~w~~~----~~~~~g-~~~~~~~~pgvFs~~~~d~~t~~ll 220 (381)
T 3dmg_A 160 VVVRR-EGPYRV-ALLEKEKEAP------------PLPSLWRAF----SARILG-AEYTFHHLPGVFSAGKVDPASLLLL 220 (381)
T ss_dssp EEEEE-ETTEEE-EEEECCSCCC------------CCCCCCEEE----EEEETT-EEEEEEECTTCTTTTSCCHHHHHHH
T ss_pred ccccc-ccCcEE-EEEEccCCCC------------CCcccccee----eEEecC-ceEEEEeCCCceeCCCCCHHHHHHH
Confidence 00000 000000 0000000000 000001000 000000 0000000111122111 1 122
Q ss_pred HHHHHHc--CCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCc
Q 043471 273 KEFVAKL--DLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSF 350 (485)
Q Consensus 273 ~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~f 350 (485)
+.+.+.+ ...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+..++++.+|+.+.+.++++|
T Consensus 221 ~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~f 299 (381)
T 3dmg_A 221 EALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARF 299 (381)
T ss_dssp HHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCE
T ss_pred HHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCe
Confidence 2333332 2346789999999999999999988 789999999999999999998765556899999999887666899
Q ss_pred cEEEEcccccc-----cCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCe
Q 043471 351 DVIYSRDTILH-----IQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFV 425 (485)
Q Consensus 351 D~i~~~~~~~~-----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 425 (485)
|+|+++..+++ ..+...+++++.++|||||++++...... . +...+... + ..+..+ ++.||+
T Consensus 300 D~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l---~---~~~~l~~~---f---~~v~~l-~~~gF~ 366 (381)
T 3dmg_A 300 DIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL---K---YEPLLEEK---F---GAFQTL-KVAEYK 366 (381)
T ss_dssp EEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS---C---HHHHHHHH---H---SCCEEE-EESSSE
T ss_pred EEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC---C---hHHHHHHh---h---ccEEEE-eCCCEE
Confidence 99999999988 34577899999999999999999843221 1 11111110 0 012223 778999
Q ss_pred EEEEeecch
Q 043471 426 DIIAEDRTE 434 (485)
Q Consensus 426 ~~~~~~~~~ 434 (485)
++.......
T Consensus 367 Vl~a~~~~~ 375 (381)
T 3dmg_A 367 VLFAEKRGR 375 (381)
T ss_dssp EEEEECC--
T ss_pred EEEEEEecc
Confidence 988765543
No 141
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.72 E-value=2.8e-17 Score=153.77 Aligned_cols=101 Identities=15% Similarity=0.241 Sum_probs=90.4
Q ss_pred CCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhh-hhhc
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNW-LLMY 132 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~-~~~~ 132 (485)
++.+|||||||+|.++..|++.+.+|+|+|+|+.+++.|+++.. +++++++|+.+ +++ +++||+|+|.. +++|
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~d~~~--~~~-~~~fD~v~~~~~~l~~ 123 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP---DAVLHHGDMRD--FSL-GRRFSAVTCMFSSIGH 123 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT---TSEEEECCTTT--CCC-SCCEEEEEECTTGGGG
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC---CCEEEECChHH--CCc-cCCcCEEEEcCchhhh
Confidence 46899999999999999999999999999999999999999863 89999999988 444 68999999998 9999
Q ss_pred cCh-HHHHHHHHHHHhhcccCcEEEEEec
Q 043471 133 LSD-KEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 133 ~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+++ .....+++++.++|+|||.+++.+.
T Consensus 124 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 124 LAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp SCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 974 3477999999999999999999643
No 142
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.72 E-value=2.6e-17 Score=152.00 Aligned_cols=154 Identities=24% Similarity=0.364 Sum_probs=116.2
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccE
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDV 352 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 352 (485)
..+.+.+ +++.+|||+|||+|.++..+++. .+++|+|+|+.+++.|+++....+.++++..+|+.+.+++ ++||+
T Consensus 25 ~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~ 99 (243)
T 3d2l_A 25 AWVLEQV--EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDA 99 (243)
T ss_dssp HHHHHHS--CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEE
T ss_pred HHHHHHc--CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCE
Confidence 3444443 45689999999999999999987 6999999999999999998865556799999999988775 88999
Q ss_pred EEEcc-ccccc---CCHHHHHHHHHhcCCCCcEEEEEecccCC---CCCC-----------hhHHH--------------
Q 043471 353 IYSRD-TILHI---QDKPALFKSFFKWLKPGGTVLISDYCKSF---GTPS-----------VEFSE-------------- 400 (485)
Q Consensus 353 i~~~~-~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---~~~~-----------~~~~~-------------- 400 (485)
|++.. +++|+ .+...+++++.++|||||++++....... .... ..+..
T Consensus 100 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (243)
T 3d2l_A 100 ITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELT 179 (243)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEE
T ss_pred EEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEE
Confidence 99986 99998 35678899999999999999986432110 0000 00000
Q ss_pred HH------------HhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 401 YI------------KQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 401 ~~------------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
+. .......++.+++.++|+++||+++.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 222 (243)
T 3d2l_A 180 FFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTG 222 (243)
T ss_dssp EEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEec
Confidence 00 00112467999999999999999988753
No 143
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.72 E-value=1.4e-16 Score=154.42 Aligned_cols=158 Identities=16% Similarity=0.119 Sum_probs=124.6
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~ 347 (485)
....+++.+.+.+ .+|||+|||+|..+..+++++ +.+++++|+ +.+++.|++++. ++..+++++.+|+.+ +++
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-
Confidence 4566777777777 899999999999999999886 679999999 999999998864 234579999999987 555
Q ss_pred CCccEEEEcccccccCCHH--HHHHHHHhcCCCCcEEEEEecccCCCCCChh--HHHH--HHhcCCCCCCHHHHHHHHHh
Q 043471 348 NSFDVIYSRDTILHIQDKP--ALFKSFFKWLKPGGTVLISDYCKSFGTPSVE--FSEY--IKQRGYDLHDVKSYGQMLKD 421 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~ 421 (485)
++||+|++..++||+++.. .++++++++|+|||++++.+........... .... ....+...++.++|.+++++
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 311 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGR 311 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHH
Confidence 6799999999999997665 8999999999999999999876544322211 1111 01112345789999999999
Q ss_pred CCCeEEEEeec
Q 043471 422 AGFVDIIAEDR 432 (485)
Q Consensus 422 aGf~~~~~~~~ 432 (485)
+||+++.+...
T Consensus 312 aGf~~~~~~~~ 322 (334)
T 2ip2_A 312 GGFAVERIVDL 322 (334)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCceeEEEEC
Confidence 99999887653
No 144
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.72 E-value=1.6e-16 Score=155.71 Aligned_cols=159 Identities=20% Similarity=0.195 Sum_probs=124.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~~~ 348 (485)
...+++.+.+.++.+|||||||+|.++..+++.. +.+++++|+ +.+++.|++++.. ...+++++.+|+.+ +++.
T Consensus 172 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~- 248 (360)
T 1tw3_A 172 FDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR- 248 (360)
T ss_dssp THHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-
T ss_pred HHHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-
Confidence 3567778888888999999999999999999886 579999999 9999999998753 44579999999876 4443
Q ss_pred CccEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecc-cCCCCCCh--hHHHH-H-HhcCCCCCCHHHHHHHHHh
Q 043471 349 SFDVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYC-KSFGTPSV--EFSEY-I-KQRGYDLHDVKSYGQMLKD 421 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~-~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~l~~ 421 (485)
.||+|++..++||+++. ..++++++++|||||++++.+.. .+...... ..... . ...+...++.++|.++|++
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAAS 328 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHH
Confidence 49999999999999866 58999999999999999999876 33222111 11111 1 1123467899999999999
Q ss_pred CCCeEEEEeecc
Q 043471 422 AGFVDIIAEDRT 433 (485)
Q Consensus 422 aGf~~~~~~~~~ 433 (485)
+||+++.+....
T Consensus 329 aGf~~~~~~~~~ 340 (360)
T 1tw3_A 329 AGLVVEEVRQLP 340 (360)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCeEEEEEeCC
Confidence 999998876543
No 145
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.72 E-value=3.3e-17 Score=149.62 Aligned_cols=131 Identities=18% Similarity=0.228 Sum_probs=107.6
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccC-CCCCCC-
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADC-TKKTYP- 346 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~-~~~~~~- 346 (485)
......++..+ +.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. .+++++++|+ ..+|++
T Consensus 35 ~~l~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~ 108 (226)
T 3m33_A 35 ELTFDLWLSRL-LTPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARANA----PHADVYEWNGKGELPAGL 108 (226)
T ss_dssp THHHHHHHHHH-CCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHC----TTSEEEECCSCSSCCTTC
T ss_pred HHHHHHHHHhc-CCCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhC----CCceEEEcchhhccCCcC
Confidence 34455555544 367889999999999999999998 789999999999999999983 3799999999 567877
Q ss_pred CCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeE
Q 043471 347 ENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVD 426 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 426 (485)
+++||+|+++ .++..+++++.++|||||+++.. ....+...+.+.++++||++
T Consensus 109 ~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~---------------------~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 109 GAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYV---------------------GPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp CCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEE---------------------ESSSCCTHHHHHHHHTTCEE
T ss_pred CCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEe---------------------CCcCCHHHHHHHHHHCCCeE
Confidence 8899999997 47788999999999999999811 02335668999999999999
Q ss_pred EEEeec
Q 043471 427 IIAEDR 432 (485)
Q Consensus 427 ~~~~~~ 432 (485)
+.+...
T Consensus 162 ~~~~~~ 167 (226)
T 3m33_A 162 VAEDHV 167 (226)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 876543
No 146
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.71 E-value=4.5e-17 Score=154.32 Aligned_cols=139 Identities=20% Similarity=0.244 Sum_probs=112.6
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcccccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTILH 361 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 361 (485)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+.++++..+|+.+.++ +++||+|++..+++|
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 36789999999999999999988 7899999999999999999887555589999999998876 789999999999999
Q ss_pred cC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 362 IQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 362 ~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
++ +...+++++.++|||||.+++............ ......++.+++.+++.. |+++..+.
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~--~~~~~~~~ 259 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP-------LPFSFTFAENELKEYYKD--WEFLEYNE 259 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS-------SCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC-------CCccccCCHHHHHHHhcC--CEEEEEEc
Confidence 95 456999999999999999888765443322211 111234567888888855 98887754
No 147
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.71 E-value=2.8e-17 Score=155.72 Aligned_cols=141 Identities=18% Similarity=0.229 Sum_probs=110.6
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCCCCCCCCCee
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPDLTFSEDSVD 122 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~D 122 (485)
..+++.+...++.+|||+|||+|.++..|++.+.+|+|+|+|+.+++.|+++....+ +++++++|+.+.+ + +++||
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~-~~~fD 186 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN--I-QENYD 186 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC--C-CSCEE
T ss_pred HHHHHHhhccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecccccc--c-cCCcc
Confidence 344444444578899999999999999999999999999999999999998754333 8999999998843 3 78999
Q ss_pred EEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhh
Q 043471 123 MMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKE 189 (485)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (485)
+|+++.+++|++++....+++++.++|+|||.+++........ ........+....+.+...+..
T Consensus 187 ~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~ 251 (286)
T 3m70_A 187 FIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDD--VPCPLPFSFTFAENELKEYYKD 251 (286)
T ss_dssp EEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSS--SCCSSCCSCCBCTTHHHHHTTT
T ss_pred EEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCC--CCCCCCccccCCHHHHHHHhcC
Confidence 9999999999988778899999999999999987754433221 1112222344467778888765
No 148
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.71 E-value=1.2e-16 Score=146.23 Aligned_cols=146 Identities=20% Similarity=0.187 Sum_probs=110.4
Q ss_pred HHHHHH---HHHcCCCCCCEEEEECCCCChhHHHHhhcCC-CEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCC---
Q 043471 270 ETTKEF---VAKLDLKPGQKVLDVGCGIGGGDFYMADKFD-VHVVGIDLSINMISFALERAIGLKCSVEFEVADCTK--- 342 (485)
Q Consensus 270 ~~~~~~---~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~--- 342 (485)
..+..+ ++.+.+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|++++... .++.++.+|+..
T Consensus 58 ~~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~ 136 (230)
T 1fbn_A 58 KLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQE 136 (230)
T ss_dssp HHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGG
T ss_pred HHHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCccc
Confidence 334556 5555677889999999999999999999864 69999999999999999987655 689999999988
Q ss_pred -CCCCCCCccEEEEcccccccCCH---HHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHH
Q 043471 343 -KTYPENSFDVIYSRDTILHIQDK---PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQM 418 (485)
Q Consensus 343 -~~~~~~~fD~i~~~~~~~~~~~~---~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (485)
.+++ ++||+|+ ++++++ ..+++++.++|||||++++. +.............+ ..+++. +
T Consensus 137 ~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~~~~---------~~~~l~-~ 199 (230)
T 1fbn_A 137 YANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDPKEI---------FKEQKE-I 199 (230)
T ss_dssp GTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCHHHH---------HHHHHH-H
T ss_pred ccccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCHHHh---------hHHHHH-H
Confidence 6666 7899999 455555 77899999999999999997 221111111111111 125677 8
Q ss_pred HHhCCCeEEEEeecc
Q 043471 419 LKDAGFVDIIAEDRT 433 (485)
Q Consensus 419 l~~aGf~~~~~~~~~ 433 (485)
|+++||+++......
T Consensus 200 l~~~Gf~~~~~~~~~ 214 (230)
T 1fbn_A 200 LEAGGFKIVDEVDIE 214 (230)
T ss_dssp HHHHTEEEEEEEECT
T ss_pred HHHCCCEEEEEEccC
Confidence 999999998876543
No 149
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=3.8e-17 Score=151.79 Aligned_cols=116 Identities=28% Similarity=0.406 Sum_probs=97.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
..+..+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.++++.++|+.+++++ ++
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~ 105 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NE 105 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SC
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CC
Confidence 34556677766677889999999999999999987 78999999999999999998865555799999999988765 68
Q ss_pred ccEEEEcc-cccccC--CHHHHHHHHHhcCCCCcEEEEEec
Q 043471 350 FDVIYSRD-TILHIQ--DKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 350 fD~i~~~~-~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
||+|++.. .++|++ +...++++++++|||||.+++...
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 99999874 445543 577899999999999999998644
No 150
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.71 E-value=2.3e-16 Score=142.16 Aligned_cols=149 Identities=15% Similarity=0.164 Sum_probs=110.8
Q ss_pred HHHHHHHH---HcCCCCCCEEEEECCCCChhHHHHhhcCC--CEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC-
Q 043471 270 ETTKEFVA---KLDLKPGQKVLDVGCGIGGGDFYMADKFD--VHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK- 343 (485)
Q Consensus 270 ~~~~~~~~---~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~- 343 (485)
.....++. .+.++||++|||+|||+|.++..+++..| .+|+|+|+|+.|++.+++++...+ ++..+.+|....
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~-ni~~V~~d~~~p~ 139 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR-NIFPILGDARFPE 139 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT-TEEEEESCTTCGG
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc-CeeEEEEeccCcc
Confidence 33444544 45789999999999999999999999763 599999999999999999876544 888888887653
Q ss_pred --CCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHh
Q 043471 344 --TYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKD 421 (485)
Q Consensus 344 --~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 421 (485)
++..+++|+|++. +.|..+...++++++++|||||++++........ .............+.|++
T Consensus 140 ~~~~~~~~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d-----------~~~p~~~~~~~ev~~L~~ 206 (233)
T 4df3_A 140 KYRHLVEGVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSID-----------VTTEPSEVYKREIKTLMD 206 (233)
T ss_dssp GGTTTCCCEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHH-----------HHTCCCHHHHHHHHHHHH
T ss_pred ccccccceEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccCC-----------CCCChHHHHHHHHHHHHH
Confidence 4566889999874 4455678899999999999999999875332110 000000112344577899
Q ss_pred CCCeEEEEeec
Q 043471 422 AGFVDIIAEDR 432 (485)
Q Consensus 422 aGf~~~~~~~~ 432 (485)
+||++++..+.
T Consensus 207 ~GF~l~e~i~L 217 (233)
T 4df3_A 207 GGLEIKDVVHL 217 (233)
T ss_dssp TTCCEEEEEEC
T ss_pred CCCEEEEEEcc
Confidence 99999887654
No 151
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=1.2e-16 Score=141.94 Aligned_cols=131 Identities=17% Similarity=0.239 Sum_probs=110.0
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
.++..+ ..++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++. ++++++++|+.+ +++++++||+|
T Consensus 38 ~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~---~~~~~~~~d~~~--~~~~~~~~D~i 111 (195)
T 3cgg_A 38 RLIDAM-APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF---PEARWVVGDLSV--DQISETDFDLI 111 (195)
T ss_dssp HHHHHH-SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTSEEEECCTTT--SCCCCCCEEEE
T ss_pred HHHHHh-ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC---CCCcEEEccccc--CCCCCCceeEE
Confidence 444444 346789999999999999999999999999999999999999986 469999999988 45667899999
Q ss_pred Ehh-hhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 125 FSN-WLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 125 ~~~-~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
+++ .+++|++.+....+++++.++|+|||.+++....... .+.+.+...++++||..
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~-------------~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRG-------------WVFGDFLEVAERVGLEL 169 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSS-------------CCHHHHHHHHHHHTEEE
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC-------------cCHHHHHHHHHHcCCEE
Confidence 998 6889998776889999999999999999997653211 36778899999999854
No 152
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.71 E-value=1.8e-18 Score=158.83 Aligned_cols=146 Identities=13% Similarity=0.112 Sum_probs=108.1
Q ss_pred HHHHHHHhhhcCcCcchhhhhcC----CCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeC
Q 043471 10 REIQKNYWMEHSANLTVEAMMLD----SKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDF 84 (485)
Q Consensus 10 ~~~~~~yw~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~ 84 (485)
.++-+.+|+.....|.......+ ..-..|..+.++.+.+.+ ..+|.+|||||||+|..+..+++. +.+|+|||+
T Consensus 13 ~e~~~~~w~~~~~~yd~~~~~l~~~g~~vm~~we~~~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~ 91 (236)
T 3orh_A 13 GENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIEC 91 (236)
T ss_dssp TCBCHHHHTTSCEEECTTSSEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEEC
T ss_pred CchhhhhHhcCcCCCCcchhhhhhcCHHHHHHHHHHHHHHHHHhh-ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeC
Confidence 45568899987766653221111 001123444444555443 356889999999999999999887 568999999
Q ss_pred ChHHHHHHHHHcCCCC-CeEEEEeeccCCCCCCCCCCeeEEEh-----hhhhhccChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 85 IDSVIKKNEEVNGHFE-NVKFMCADVTSPDLTFSEDSVDMMFS-----NWLLMYLSDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 85 s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~D~v~~-----~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
|+.+++.|+++....+ +++++.+|+.....++++++||.|+. ...++|..+ .+.++++++|+|||||.+++.
T Consensus 92 ~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~--~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 92 NDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQ--FNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHH--HHHHHHTHHHHEEEEEEEEEC
T ss_pred CHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcc--hhhhhhhhhheeCCCCEEEEE
Confidence 9999999999865433 78999999876545677899999863 556677777 679999999999999999874
No 153
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.71 E-value=3.8e-17 Score=152.56 Aligned_cols=152 Identities=18% Similarity=0.286 Sum_probs=114.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCcc
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFD 351 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 351 (485)
+..++..+. .++.+|||||||+|.++..+++. +.+++|+|+|+.+++.|+++... .+..+|+.++++++++||
T Consensus 44 ~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~-----~~~~~d~~~~~~~~~~fD 116 (260)
T 2avn_A 44 IGSFLEEYL-KNPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGVK-----NVVEAKAEDLPFPSGAFE 116 (260)
T ss_dssp HHHHHHHHC-CSCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTCS-----CEEECCTTSCCSCTTCEE
T ss_pred HHHHHHHhc-CCCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcCC-----CEEECcHHHCCCCCCCEE
Confidence 344444442 37789999999999999999987 78999999999999999998651 288899999988889999
Q ss_pred EEEEccccccc-CCHHHHHHHHHhcCCCCcEEEEEecccCCC-------CCChhHHHHHHhcC-----------CCCCCH
Q 043471 352 VIYSRDTILHI-QDKPALFKSFFKWLKPGGTVLISDYCKSFG-------TPSVEFSEYIKQRG-----------YDLHDV 412 (485)
Q Consensus 352 ~i~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-------~~~~~~~~~~~~~~-----------~~~~~~ 412 (485)
+|++..+++|+ +++..+++++.++|||||++++..++.... .............. ..+++.
T Consensus 117 ~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (260)
T 2avn_A 117 AVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKP 196 (260)
T ss_dssp EEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCG
T ss_pred EEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCH
Confidence 99999877666 789999999999999999999987653210 00001111111110 025678
Q ss_pred HHHHHHHHhCCCeEEEEeecc
Q 043471 413 KSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 413 ~~~~~~l~~aGf~~~~~~~~~ 433 (485)
+++.++ +||+++.+....
T Consensus 197 ~~l~~l---aGf~~~~~~~~~ 214 (260)
T 2avn_A 197 EDLDSL---EGFETVDIRGIG 214 (260)
T ss_dssp GGGSSC---TTEEEEEEEEEC
T ss_pred HHHHHh---cCceEEEEECCC
Confidence 888777 999998876543
No 154
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.70 E-value=2.1e-17 Score=152.88 Aligned_cols=104 Identities=20% Similarity=0.354 Sum_probs=91.0
Q ss_pred CCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCCCCCCCCCeeEEEhhh-hhh
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPDLTFSEDSVDMMFSNW-LLM 131 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~D~v~~~~-~~~ 131 (485)
++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++....+ +++++++|+.+ ++++ ++||+|+++. +++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN--LNIN-RKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG--CCCS-CCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEeccccc--CCcc-CCceEEEEcCcccc
Confidence 67899999999999999999999999999999999999998764323 79999999988 4444 8999999998 999
Q ss_pred ccCh-HHHHHHHHHHHhhcccCcEEEEEec
Q 043471 132 YLSD-KEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 132 ~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
|+++ +....+++++.++|+|||.+++..+
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9943 4478999999999999999999654
No 155
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.70 E-value=3.5e-17 Score=154.26 Aligned_cols=149 Identities=26% Similarity=0.261 Sum_probs=114.8
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCCCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~~~ 119 (485)
..+.......++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... .++++++++|+.. ++++++
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~~~ 104 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFS--LPFEDS 104 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG--CCSCTT
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccccc--CCCCCC
Confidence 33444445567899999999999999999998 67999999999999999987532 3589999999998 567789
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc---------------cCCCCCCCCChhHHH
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK---------------RKHNPTHYREPRFYS 184 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 184 (485)
+||+|+++.+++|+++ ...+++++.++|+|||++++.++......... .............+.
T Consensus 105 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 182 (276)
T 3mgg_A 105 SFDHIFVCFVLEHLQS--PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIY 182 (276)
T ss_dssp CEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHH
T ss_pred CeeEEEEechhhhcCC--HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHH
Confidence 9999999999999998 55999999999999999999875432110000 001112223456788
Q ss_pred HHhhhcceecCC
Q 043471 185 KVFKECQIQDAS 196 (485)
Q Consensus 185 ~~~~~~~~~~~~ 196 (485)
.+++++||..+.
T Consensus 183 ~~l~~aGf~~v~ 194 (276)
T 3mgg_A 183 PLLQESGFEKIR 194 (276)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHCCCCeEE
Confidence 999999996543
No 156
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.70 E-value=4.5e-17 Score=153.39 Aligned_cols=154 Identities=14% Similarity=0.164 Sum_probs=119.1
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-c--CcEEEEeCChH------HHHHHHHHcCCC---CCeEEEEee
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-A--GHVIALDFIDS------VIKKNEEVNGHF---ENVKFMCAD 108 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~------~~~~a~~~~~~~---~~~~~~~~d 108 (485)
..+..+++.+...++.+|||||||+|.++..++++ + .+|+|+|+|+. +++.|+++.... ++++++++|
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 44567778888888999999999999999999988 4 79999999997 999999876432 479999998
Q ss_pred -ccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc------------------
Q 043471 109 -VTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK------------------ 169 (485)
Q Consensus 109 -~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~------------------ 169 (485)
.....+++++++||+|+++.+++|+++. ..+++.+.++++|||++++.+..........
T Consensus 110 ~~~~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (275)
T 3bkx_A 110 NLSDDLGPIADQHFDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAP 187 (275)
T ss_dssp CTTTCCGGGTTCCCSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSC
T ss_pred hhhhccCCCCCCCEEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccc
Confidence 4444466778999999999999999884 3577777778888999999887654321100
Q ss_pred -cCCCCCCCCChhHHHHHhhhcceecCC
Q 043471 170 -RKHNPTHYREPRFYSKVFKECQIQDAS 196 (485)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (485)
.......+.+.+.+.+.++++||....
T Consensus 188 ~~~~~~~~~~s~~~l~~~l~~aGf~~~~ 215 (275)
T 3bkx_A 188 SDVANIRTLITPDTLAQIAHDNTWTYTA 215 (275)
T ss_dssp CTTCSCCCCCCHHHHHHHHHHHTCEEEE
T ss_pred cccccccccCCHHHHHHHHHHCCCeeEE
Confidence 011223456888999999999996543
No 157
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.70 E-value=1.7e-17 Score=163.53 Aligned_cols=141 Identities=21% Similarity=0.292 Sum_probs=110.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC----------CCCCeEEEEeeccCCC-C---
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG----------HFENVKFMCADVTSPD-L--- 114 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~----------~~~~~~~~~~d~~~~~-~--- 114 (485)
..++.+|||||||+|..+..|++. +.+|+|+|+|+.+++.|+++.. ..++++++++|+.++. +
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457889999999999999999886 4599999999999999998742 1258999999998731 1
Q ss_pred CCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc-------CCCCCCCCChhHHHHHh
Q 043471 115 TFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR-------KHNPTHYREPRFYSKVF 187 (485)
Q Consensus 115 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 187 (485)
++++++||+|+++.+++|+++ ...+++++.++|||||++++.++.......... ..........+.+.+++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 238 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLV 238 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHH
Confidence 678899999999999999988 669999999999999999998765432211110 01111223568899999
Q ss_pred hhcceec
Q 043471 188 KECQIQD 194 (485)
Q Consensus 188 ~~~~~~~ 194 (485)
+++||..
T Consensus 239 ~~aGF~~ 245 (383)
T 4fsd_A 239 AEAGFRD 245 (383)
T ss_dssp HHTTCCC
T ss_pred HHCCCce
Confidence 9999954
No 158
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=6.5e-18 Score=155.38 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=90.2
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC--CCCCCCccEEEE-cc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK--TYPENSFDVIYS-RD 357 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~i~~-~~ 357 (485)
..++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++....+.++.++++|+.++ ++++++||+|++ ..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 567889999999999999999875344999999999999999999876566899999999887 788899999999 55
Q ss_pred cc--c--ccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 358 TI--L--HIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 358 ~~--~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
++ + |..++..++++++|+|||||++++.+..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 43 1 2224557899999999999999988643
No 159
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.70 E-value=1e-16 Score=156.86 Aligned_cols=143 Identities=12% Similarity=0.207 Sum_probs=114.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCCCCCCCCeeEEEhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDLTFSEDSVDMMFSN 127 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~D~v~~~ 127 (485)
..+.+|||||||+|.++..++++ +.+|+++|+ +.+++.|+++.... ++++++.+|+.+..+|++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 45679999999999999999986 568999999 99999999986543 379999999987432344 789999999
Q ss_pred hhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc--------------CCCCCCCCChhHHHHHhhhccee
Q 043471 128 WLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR--------------KHNPTHYREPRFYSKVFKECQIQ 193 (485)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 193 (485)
.++|+++++...+++++++++|+|||.+++.+........... .......++.+.|.++++++||.
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~ 335 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLE 335 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCe
Confidence 9999999887889999999999999999998876654322110 11122344789999999999997
Q ss_pred cCCC
Q 043471 194 DASG 197 (485)
Q Consensus 194 ~~~g 197 (485)
...-
T Consensus 336 ~v~~ 339 (363)
T 3dp7_A 336 VEEI 339 (363)
T ss_dssp ESCC
T ss_pred EEEE
Confidence 7654
No 160
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.70 E-value=1.3e-17 Score=158.20 Aligned_cols=150 Identities=20% Similarity=0.368 Sum_probs=108.9
Q ss_pred HHhccCCCC--CCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCC---------------------
Q 043471 45 EVLSLLPPY--EGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHF--------------------- 99 (485)
Q Consensus 45 ~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~--------------------- 99 (485)
..++.+... ++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++....
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGE 114 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccc
Confidence 344444433 6889999999999999999998 679999999999999999875321
Q ss_pred ---------------------------------------CCeEEEEeeccCCC---CCCCCCCeeEEEhhhhhhcc----
Q 043471 100 ---------------------------------------ENVKFMCADVTSPD---LTFSEDSVDMMFSNWLLMYL---- 133 (485)
Q Consensus 100 ---------------------------------------~~~~~~~~d~~~~~---~~~~~~~~D~v~~~~~~~~~---- 133 (485)
.+++|+++|+.... +++.+++||+|+|..+++|+
T Consensus 115 ~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~ 194 (292)
T 3g07_A 115 EGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNW 194 (292)
T ss_dssp ---------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHH
T ss_pred cccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcC
Confidence 37999999987632 12467899999999999887
Q ss_pred ChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc------CCCCCCCCChhHHHHHhhh--cceec
Q 043471 134 SDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR------KHNPTHYREPRFYSKVFKE--CQIQD 194 (485)
Q Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~ 194 (485)
++....+++++++++|+|||+|++....+........ .........++.+..++.+ +||..
T Consensus 195 ~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~ 263 (292)
T 3g07_A 195 GDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSS 263 (292)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCE
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceE
Confidence 4556889999999999999999996543321100000 0000111246778888888 99954
No 161
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.70 E-value=2.6e-16 Score=147.45 Aligned_cols=153 Identities=11% Similarity=0.053 Sum_probs=113.4
Q ss_pred HHHHHHcC-CCCCCEEEEECCCC---ChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCC---
Q 043471 273 KEFVAKLD-LKPGQKVLDVGCGI---GGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKT--- 344 (485)
Q Consensus 273 ~~~~~~~~-~~~~~~vLDiGcG~---G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~--- 344 (485)
..+++.+. .....+|||||||+ |.++..+.+.. +.+|+++|+|+.|++.|++++.. ..+++++.+|+.+.+
T Consensus 66 ~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~ 144 (274)
T 2qe6_A 66 VRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYIL 144 (274)
T ss_dssp HHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHH
T ss_pred HHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhh
Confidence 34444443 23447999999999 98877666654 67999999999999999999854 357999999997631
Q ss_pred --------CCCCCccEEEEcccccccCC--HHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHh--cCCCCCCH
Q 043471 345 --------YPENSFDVIYSRDTILHIQD--KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQ--RGYDLHDV 412 (485)
Q Consensus 345 --------~~~~~fD~i~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 412 (485)
++..+||+|++..++||+++ +..+|++++++|+|||+|++.+...............+.. ....+.+.
T Consensus 145 ~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 224 (274)
T 2qe6_A 145 NHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTP 224 (274)
T ss_dssp HSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCH
T ss_pred ccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCH
Confidence 23358999999999999986 8999999999999999999998765320000111121111 13456789
Q ss_pred HHHHHHHHhCCCeEEE
Q 043471 413 KSYGQMLKDAGFVDII 428 (485)
Q Consensus 413 ~~~~~~l~~aGf~~~~ 428 (485)
+++.++| .||++++
T Consensus 225 ~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 225 EEIERQF--GDFELVE 238 (274)
T ss_dssp HHHHHTT--TTCEECT
T ss_pred HHHHHHh--CCCeEcc
Confidence 9999999 5998764
No 162
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.69 E-value=2.4e-17 Score=156.57 Aligned_cols=150 Identities=13% Similarity=0.142 Sum_probs=103.3
Q ss_pred hHHHhccCC-CCCCCcEEEEcCCCCcchHHH----Hhh--cCc--EEEEeCChHHHHHHHHHcCC---CCCeEE--EEee
Q 043471 43 RPEVLSLLP-PYEGKTVLEFGAGIGRFTGEL----AKK--AGH--VIALDFIDSVIKKNEEVNGH---FENVKF--MCAD 108 (485)
Q Consensus 43 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l----~~~--~~~--v~giD~s~~~~~~a~~~~~~---~~~~~~--~~~d 108 (485)
...++..+. ..++.+|||||||+|.++..+ +.+ +.. ++|+|+|++|++.|+++... .+++++ ..++
T Consensus 40 l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~ 119 (292)
T 2aot_A 40 LPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKET 119 (292)
T ss_dssp HHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSC
T ss_pred chhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecc
Confidence 344555554 356789999999999876543 333 233 39999999999999988642 235544 4555
Q ss_pred ccCCC----CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCC-----cc-c--cCCCCCC
Q 043471 109 VTSPD----LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSG-----DS-K--RKHNPTH 176 (485)
Q Consensus 109 ~~~~~----~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----~~-~--~~~~~~~ 176 (485)
+.++. .++++++||+|+++.++||+++ ..+++++++++|||||++++......... .. . .......
T Consensus 120 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (292)
T 2aot_A 120 SSEYQSRMLEKKELQKWDFIHMIQMLYYVKD--IPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQ 197 (292)
T ss_dssp HHHHHHHHHTTTCCCCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCC
T ss_pred hhhhhhhhccccCCCceeEEEEeeeeeecCC--HHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCccc
Confidence 54321 1246789999999999999998 66999999999999999999765431100 00 0 0011223
Q ss_pred CCChhHHHHHhhhcceec
Q 043471 177 YREPRFYSKVFKECQIQD 194 (485)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~ 194 (485)
+.+++.+.++++++||..
T Consensus 198 ~~~~~~~~~~l~~aGf~~ 215 (292)
T 2aot_A 198 YITSDDLTQMLDNLGLKY 215 (292)
T ss_dssp CCCHHHHHHHHHHHTCCE
T ss_pred CCCHHHHHHHHHHCCCce
Confidence 457888999999999843
No 163
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.69 E-value=2.9e-16 Score=153.86 Aligned_cols=153 Identities=18% Similarity=0.266 Sum_probs=119.3
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 272 TKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 272 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
...+++.+. +.+..+|||||||+|.++..+++++ +.+++++|+ +.+++.|++. .+++++.+|+.+ +++.+
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~p~~- 262 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-GVPKG- 262 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCCCC-
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-CCCCC-
Confidence 445666665 6777899999999999999999987 679999999 8888776532 479999999987 66654
Q ss_pred ccEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCCChh------HHHH-HH--hcCCCCCCHHHHHHH
Q 043471 350 FDVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTPSVE------FSEY-IK--QRGYDLHDVKSYGQM 418 (485)
Q Consensus 350 fD~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~------~~~~-~~--~~~~~~~~~~~~~~~ 418 (485)
|+|++..++||+++. .++|++++++|||||++++.+........... .... .. ..+...++.++|.++
T Consensus 263 -D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~l 341 (368)
T 3reo_A 263 -DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQAL 341 (368)
T ss_dssp -SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHH
T ss_pred -CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHH
Confidence 999999999999764 47899999999999999999877554332211 1111 11 123456789999999
Q ss_pred HHhCCCeEEEEeecc
Q 043471 419 LKDAGFVDIIAEDRT 433 (485)
Q Consensus 419 l~~aGf~~~~~~~~~ 433 (485)
|+++||+++++....
T Consensus 342 l~~AGF~~v~~~~~~ 356 (368)
T 3reo_A 342 AMASGFRGFKVASCA 356 (368)
T ss_dssp HHHTTCCEEEEEEEE
T ss_pred HHHCCCeeeEEEEeC
Confidence 999999999886643
No 164
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.69 E-value=6.5e-16 Score=138.59 Aligned_cols=133 Identities=13% Similarity=0.167 Sum_probs=110.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~ 347 (485)
+....+++.+.+.++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.|++++...+ .++++..+|+.+.....
T Consensus 27 ~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 27 EVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL 106 (204)
T ss_dssp HHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC
Confidence 444677888889999999999999999999999885 4799999999999999999875322 47999999997654344
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCe
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFV 425 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 425 (485)
++||+|++..+++ +...+++++.++|||||++++..... .+.+.+.+.++++||.
T Consensus 107 ~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~--------------------~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 107 PDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL--------------------DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp CCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH--------------------HHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc--------------------ccHHHHHHHHHHCCCc
Confidence 7899999988765 78999999999999999999985431 1356788999999993
No 165
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=4.6e-17 Score=150.57 Aligned_cols=110 Identities=18% Similarity=0.169 Sum_probs=93.7
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCC--CC-CCCeeEEEhhh
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLT--FS-EDSVDMMFSNW 128 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~--~~-~~~~D~v~~~~ 128 (485)
..++.+|||||||+|.++..|++.+.+|+|+|+|+.+++.|+++.. ..+++++++|+.+++.+ +. ...||+|+++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT-AANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC-CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc-ccCceEEECcccccccccccccccCccEEEEcc
Confidence 3567899999999999999999999999999999999999999874 35899999999874321 11 12499999999
Q ss_pred hhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 129 LLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 129 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
+++|+++.....+++++.++|||||++++.+...
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 9999996668899999999999999999987653
No 166
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.69 E-value=4.2e-16 Score=152.43 Aligned_cols=153 Identities=20% Similarity=0.246 Sum_probs=120.2
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 272 TKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 272 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
...+++.+. +.+..+|||||||+|.++..+++++ +.+++++|+ +.+++.|++. .+++++.+|+.+ |++.+
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-~~p~~- 260 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-EVPSG- 260 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCCCC-
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-CCCCC-
Confidence 456777776 7778899999999999999999987 679999999 8888776542 489999999987 77754
Q ss_pred ccEEEEcccccccCC--HHHHHHHHHhcCCCCcEEEEEecccCCCCCChh------HHHH-HH--hcCCCCCCHHHHHHH
Q 043471 350 FDVIYSRDTILHIQD--KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVE------FSEY-IK--QRGYDLHDVKSYGQM 418 (485)
Q Consensus 350 fD~i~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~------~~~~-~~--~~~~~~~~~~~~~~~ 418 (485)
|+|++..++|++++ ..++|++++++|||||++++.+........... .... .. ..+...++.++|.++
T Consensus 261 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~l 339 (364)
T 3p9c_A 261 -DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQAL 339 (364)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHH
T ss_pred -CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHH
Confidence 99999999999965 458899999999999999999877654332211 0111 11 123456789999999
Q ss_pred HHhCCCeEEEEeecc
Q 043471 419 LKDAGFVDIIAEDRT 433 (485)
Q Consensus 419 l~~aGf~~~~~~~~~ 433 (485)
|+++||+++++....
T Consensus 340 l~~AGF~~v~~~~~~ 354 (364)
T 3p9c_A 340 ARGAGFTGVKSTYIY 354 (364)
T ss_dssp HHHTTCCEEEEEEEE
T ss_pred HHHCCCceEEEEEcC
Confidence 999999999887643
No 167
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.69 E-value=1.2e-16 Score=152.87 Aligned_cols=140 Identities=16% Similarity=0.125 Sum_probs=109.2
Q ss_pred CCCCCcEEEEcCCCCcchHHHHh--h-cCcEEEEeCChHHHHHHHHHcCCCC---CeEEEEeeccCCCCCCCCCCeeEEE
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAK--K-AGHVIALDFIDSVIKKNEEVNGHFE---NVKFMCADVTSPDLTFSEDSVDMMF 125 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~giD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~D~v~ 125 (485)
..++.+|||||||+|..+..++. . +.+|+|+|+|+.+++.|+++....+ +++++++|+.+ ++++ ++||+|+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~-~~fD~v~ 192 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK--LDTR-EGYDLLT 192 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG--CCCC-SCEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc--CCcc-CCeEEEE
Confidence 45688999999999999999962 2 6799999999999999999876432 59999999998 5555 8999999
Q ss_pred hhhhhhccChHH-HHHHHHHHHhhcccCcEEEEEeccCCCCCccccC----------------------CC-CCCCCChh
Q 043471 126 SNWLLMYLSDKE-VEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRK----------------------HN-PTHYREPR 181 (485)
Q Consensus 126 ~~~~~~~~~~~~-~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~----------------------~~-~~~~~~~~ 181 (485)
++.+++|+++.. ...+++++.++|+|||++++.+............ .. ...+.+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 999999997543 4568999999999999999987654322111110 00 11335788
Q ss_pred HHHHHhhhcceec
Q 043471 182 FYSKVFKECQIQD 194 (485)
Q Consensus 182 ~~~~~~~~~~~~~ 194 (485)
.+.+.++++||..
T Consensus 273 ~~~~~l~~aGF~~ 285 (305)
T 3ocj_A 273 QTRAQLEEAGFTD 285 (305)
T ss_dssp HHHHHHHHTTCEE
T ss_pred HHHHHHHHCCCEE
Confidence 9999999999965
No 168
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.69 E-value=2.7e-16 Score=144.84 Aligned_cols=111 Identities=16% Similarity=0.082 Sum_probs=92.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCC----
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTY---- 345 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~---- 345 (485)
.....+++.+.+.++.+|||||||+|.++..++++ +.+|+|+|+|+.|++.|+++.... ++..++.+.+.
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~~~~ 105 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR-----CVTIDLLDITAEIPK 105 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSCCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc-----cceeeeeeccccccc
Confidence 45678888888999999999999999999999988 789999999999999999998643 22333333322
Q ss_pred -CCCCccEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEec
Q 043471 346 -PENSFDVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 346 -~~~~fD~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
.+++||+|++..+++|+. +...+++++.++| |||+++++..
T Consensus 106 ~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 106 ELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 247899999999999984 5677999999999 9999999854
No 169
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.69 E-value=1.9e-16 Score=142.18 Aligned_cols=127 Identities=18% Similarity=0.112 Sum_probs=105.6
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCC-CeEEEEccCCCCCCCCCCccEEEEcccc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKC-SVEFEVADCTKKTYPENSFDVIYSRDTI 359 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~-~i~~~~~d~~~~~~~~~~fD~i~~~~~~ 359 (485)
+.++.+|||+|||+|.++..+++....+++|+|+|+.+++.|++++...+. ++++..+|+.+.+ +++||+|+++.++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--CCCceEEEECCcH
Confidence 567889999999999999998876345999999999999999998764332 3999999997753 5899999999888
Q ss_pred cccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeec
Q 043471 360 LHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 360 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 432 (485)
++ ...+++++.++|+|||++++.+.... +...+.++++++||+++.....
T Consensus 136 ~~---~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------~~~~~~~~~~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 136 EI---LLDLIPQLDSHLNEDGQVIFSGIDYL--------------------QLPKIEQALAENSFQIDLKMRA 185 (205)
T ss_dssp HH---HHHHGGGSGGGEEEEEEEEEEEEEGG--------------------GHHHHHHHHHHTTEEEEEEEEE
T ss_pred HH---HHHHHHHHHHhcCCCCEEEEEecCcc--------------------cHHHHHHHHHHcCCceEEeecc
Confidence 76 47889999999999999999754321 3677899999999999876543
No 170
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.68 E-value=1.5e-16 Score=144.55 Aligned_cols=127 Identities=16% Similarity=0.237 Sum_probs=103.5
Q ss_pred CCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccC
Q 043471 55 GKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLS 134 (485)
Q Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~ 134 (485)
+.+|||||||+|.++..+++. +|+|+|+.+++.++++ +++++++|+.. +++++++||+|++..+++|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~-----~~~~~~~d~~~--~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR-----GVFVLKGTAEN--LPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-----TCEEEECBTTB--CCSCTTCEEEEEEESCGGGSS
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-----CCEEEEccccc--CCCCCCCeeEEEEcchHhhcc
Confidence 789999999999999999876 9999999999999986 68999999987 556778999999999999998
Q ss_pred hHHHHHHHHHHHhhcccCcEEEEEeccCCCCC--------ccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 135 DKEVEKLAERMVKWLKVGGYIFFRESCFHQSG--------DSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 135 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
+ ...+++++.++|+|||.+++.++...... ..........+.+.+.+.++++++||..
T Consensus 117 ~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 182 (219)
T 1vlm_A 117 D--PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEE 182 (219)
T ss_dssp C--HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred C--HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeE
Confidence 7 56999999999999999999876542110 0001112234457889999999999954
No 171
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.68 E-value=6.5e-17 Score=148.90 Aligned_cols=104 Identities=15% Similarity=0.286 Sum_probs=90.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEh-hhhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFS-NWLLM 131 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~-~~~~~ 131 (485)
.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++. ++++++++|+.+ +++ +++||+|+| ..+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~--~~~-~~~~D~v~~~~~~~~ 112 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL---PDATLHQGDMRD--FRL-GRKFSAVVSMFSSVG 112 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC---TTCEEEECCTTT--CCC-SSCEEEEEECTTGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC---CCCEEEECCHHH--ccc-CCCCcEEEEcCchHh
Confidence 56789999999999999999999889999999999999999986 579999999988 444 679999995 55899
Q ss_pred ccCh-HHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 132 YLSD-KEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 132 ~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
|+++ +....+++++.++|+|||.+++.++..
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 113 YLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp GCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 9954 457899999999999999999976543
No 172
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.68 E-value=2.1e-16 Score=155.31 Aligned_cols=151 Identities=19% Similarity=0.228 Sum_probs=119.2
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCC
Q 043471 272 TKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 272 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
...+++.+. +.++.+|||||||+|.++..+++++ +.+++++|+ +.+++.|++. .+++++.+|+.+ +++.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~~~-- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-SVPQ-- 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCCC--
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-CCCC--
Confidence 356677775 6778899999999999999999987 679999999 9999877642 369999999987 6654
Q ss_pred ccEEEEcccccccCCHH--HHHHHHHhcCCCCcEEEEEecccCCCCCCh------hHHHHH-H-hcCCCCCCHHHHHHHH
Q 043471 350 FDVIYSRDTILHIQDKP--ALFKSFFKWLKPGGTVLISDYCKSFGTPSV------EFSEYI-K-QRGYDLHDVKSYGQML 419 (485)
Q Consensus 350 fD~i~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------~~~~~~-~-~~~~~~~~~~~~~~~l 419 (485)
||+|++..++||+++.. .+|++++++|||||++++.+...+...... ...... . ..+...++.++|.++|
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll 347 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLS 347 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHH
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHH
Confidence 99999999999998877 999999999999999999987654432211 111110 0 1223567899999999
Q ss_pred HhCCCeEEEEee
Q 043471 420 KDAGFVDIIAED 431 (485)
Q Consensus 420 ~~aGf~~~~~~~ 431 (485)
+++||+++++..
T Consensus 348 ~~aGf~~~~~~~ 359 (372)
T 1fp1_D 348 KLSGFSKFQVAC 359 (372)
T ss_dssp HHTTCSEEEEEE
T ss_pred HHCCCceEEEEE
Confidence 999999988765
No 173
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.68 E-value=5.3e-17 Score=155.87 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=116.6
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--------CCCCeEEEEccCCCCC----CC--C
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--------LKCSVEFEVADCTKKT----YP--E 347 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--------~~~~i~~~~~d~~~~~----~~--~ 347 (485)
.++.+|||+|||+|.++..+++..+.+++|+|+|+.|++.|+++... ...++++.++|+...+ ++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 46789999999999999999876567999999999999999988753 2236899999998875 53 4
Q ss_pred CCccEEEEccccccc-C---CHHHHHHHHHhcCCCCcEEEEEecccCC-------------CCC--------ChhHHHHH
Q 043471 348 NSFDVIYSRDTILHI-Q---DKPALFKSFFKWLKPGGTVLISDYCKSF-------------GTP--------SVEFSEYI 402 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~-~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~-------------~~~--------~~~~~~~~ 402 (485)
++||+|++..++||+ . +...++++++++|||||.++++.+.... ... ...+....
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999988 3 4578999999999999999998764310 000 00000000
Q ss_pred HhcC----------CCCCCHHHHHHHHHhCCCeEEEEeecchHHHHHH
Q 043471 403 KQRG----------YDLHDVKSYGQMLKDAGFVDIIAEDRTEQFVQVL 440 (485)
Q Consensus 403 ~~~~----------~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~ 440 (485)
...+ ....+.+++.++++++||+++........+....
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f~~~g~~~~ 240 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKI 240 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEHHHHHHHHT
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCHHHHHHHhc
Confidence 0000 1135678999999999999999887665554433
No 174
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.68 E-value=5.9e-17 Score=154.52 Aligned_cols=114 Identities=21% Similarity=0.278 Sum_probs=95.5
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHh---hcCcEEEEeCChHHHHHHHHHcCC----CCCeEEEEeeccC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAK---KAGHVIALDFIDSVIKKNEEVNGH----FENVKFMCADVTS 111 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~giD~s~~~~~~a~~~~~~----~~~~~~~~~d~~~ 111 (485)
.......+.+.+. .++.+|||||||+|..+..|++ .+.+|+|+|+|+.+++.|+++... .++++++++|+.+
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 3444445554443 5788999999999999999995 477999999999999999987532 3689999999998
Q ss_pred CCCCCCC------CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 112 PDLTFSE------DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 112 ~~~~~~~------~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
+++++ ++||+|+++.+++|+ + ...+++++.++|+|||.+++.
T Consensus 101 --~~~~~~~~~~~~~fD~V~~~~~l~~~-~--~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 101 --FKFLGADSVDKQKIDMITAVECAHWF-D--FEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp --CGGGCTTTTTSSCEEEEEEESCGGGS-C--HHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCccccccccCCCeeEEeHhhHHHHh-C--HHHHHHHHHHhcCCCcEEEEE
Confidence 44555 899999999999999 5 679999999999999999983
No 175
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.68 E-value=9.6e-16 Score=140.23 Aligned_cols=140 Identities=18% Similarity=0.189 Sum_probs=108.9
Q ss_pred HHHHHHcCCCCCCEEEEECCC-CChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC-CCCCCCc
Q 043471 273 KEFVAKLDLKPGQKVLDVGCG-IGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK-TYPENSF 350 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~-~~~~~~f 350 (485)
+.++-...++++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|++++...+.+++++++|+... ++++++|
T Consensus 45 ~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 124 (230)
T 3evz_A 45 RYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTF 124 (230)
T ss_dssp HHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCE
T ss_pred hhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCce
Confidence 344244456788999999999 99999999987667999999999999999999875555899999997543 4556899
Q ss_pred cEEEEcccccccCC-------------------HHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCC
Q 043471 351 DVIYSRDTILHIQD-------------------KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHD 411 (485)
Q Consensus 351 D~i~~~~~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (485)
|+|+++..+++.++ ...+++++.++|||||++++...... ..
T Consensus 125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------------~~ 185 (230)
T 3evz_A 125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------------------KL 185 (230)
T ss_dssp EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------------------HH
T ss_pred eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------------------hH
Confidence 99999877765433 47899999999999999998743210 12
Q ss_pred HHHHHHHHHhCCCeEEEEee
Q 043471 412 VKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 412 ~~~~~~~l~~aGf~~~~~~~ 431 (485)
...+.+.++++||++..++.
T Consensus 186 ~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 186 LNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCceEEEEe
Confidence 46788999999998776643
No 176
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.68 E-value=1.6e-15 Score=147.64 Aligned_cols=159 Identities=17% Similarity=0.214 Sum_probs=126.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC-CCCCeEEEEccCCCCCCCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG-LKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~-~~~~i~~~~~d~~~~~~~~~ 348 (485)
....+++.+.+.+..+|||||||+|.++..+++++ +.+++..|. |.+++.|+++... ...+|+++.+|+.+.|.+
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~-- 243 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP-- 243 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--
Confidence 34567777777788899999999999999999987 678999997 8899999988753 346899999999876654
Q ss_pred CccEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHH-----HhcCCCCCCHHHHHHHHHh
Q 043471 349 SFDVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYI-----KQRGYDLHDVKSYGQMLKD 421 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~ 421 (485)
.+|+|++..++|+++|. .++|+++++.|+|||+++|.+....+....+...... ...+....+.++|.++|++
T Consensus 244 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~ 323 (353)
T 4a6d_A 244 EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSS 323 (353)
T ss_dssp CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHH
T ss_pred CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHH
Confidence 47999999999999865 5789999999999999999987765543332222211 1123356789999999999
Q ss_pred CCCeEEEEeec
Q 043471 422 AGFVDIIAEDR 432 (485)
Q Consensus 422 aGf~~~~~~~~ 432 (485)
+||+++++...
T Consensus 324 AGf~~v~v~~~ 334 (353)
T 4a6d_A 324 AGFRDFQFKKT 334 (353)
T ss_dssp HTCEEEEEECC
T ss_pred CCCceEEEEEc
Confidence 99999987654
No 177
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.68 E-value=6.9e-16 Score=138.25 Aligned_cols=136 Identities=12% Similarity=0.111 Sum_probs=110.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCC--CCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGL--KCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~i~~~~~d~~~~~~~~ 347 (485)
+....++..+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++... ..+++++.+|+.+.....
T Consensus 42 ~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 120 (204)
T 3njr_A 42 PMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL 120 (204)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC
Confidence 34456777888889999999999999999999998 889999999999999999987643 337999999998843234
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEE
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDI 427 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 427 (485)
.+||+|++..++ +.. +++++.++|||||++++..... .+...+.+.+++.||++.
T Consensus 121 ~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~--------------------~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 121 PLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL--------------------ESETLLTQLHARHGGQLL 175 (204)
T ss_dssp CCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH--------------------HHHHHHHHHHHHHCSEEE
T ss_pred CCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc--------------------ccHHHHHHHHHhCCCcEE
Confidence 679999987744 566 9999999999999999985421 124567788999999887
Q ss_pred EEee
Q 043471 428 IAED 431 (485)
Q Consensus 428 ~~~~ 431 (485)
.+..
T Consensus 176 ~i~~ 179 (204)
T 3njr_A 176 RIDI 179 (204)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7643
No 178
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.68 E-value=9.6e-16 Score=149.78 Aligned_cols=287 Identities=15% Similarity=0.105 Sum_probs=166.0
Q ss_pred HhccCCC-CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHH---HcCCCC-CeEEEEeeccCCCCCCCCCC
Q 043471 46 VLSLLPP-YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEE---VNGHFE-NVKFMCADVTSPDLTFSEDS 120 (485)
Q Consensus 46 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~---~~~~~~-~~~~~~~d~~~~~~~~~~~~ 120 (485)
+++.+.. ..+.+||.|+.+.|.++..|+.. .++.+.-|--.....+. +++..+ ++++... ... ....
T Consensus 29 ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~--~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~-----~~~~ 100 (375)
T 4dcm_A 29 LLQQLDDTEIRGPVLILNDAFGALSCALAEH--KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD-----YPQQ 100 (375)
T ss_dssp HHHTTTTCCCCSCEEEECCSSSHHHHHTGGG--CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC-----CCSS
T ss_pred HHHhhhhccCCCCEEEECCCCCHHHHhhccC--CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc-----cccC
Confidence 4555432 24568999999999999998765 45555334332222222 222111 3555432 122 2467
Q ss_pred eeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhc-cee--cCCC
Q 043471 121 VDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKEC-QIQ--DASG 197 (485)
Q Consensus 121 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~g 197 (485)
||+|+.... -. .......+..+...|+||+.+++...... ......+.|++. +.. ....
T Consensus 101 ~~~v~~~lp-k~--~~~l~~~L~~l~~~l~~~~~i~~~g~~~~---------------~~~~~~~~l~~~~~~~~~~~a~ 162 (375)
T 4dcm_A 101 PGVVLIKVP-KT--LALLEQQLRALRKVVTSDTRIIAGAKARD---------------IHTSTLELFEKVLGPTTTTLAW 162 (375)
T ss_dssp CSEEEEECC-SC--HHHHHHHHHHHHTTCCTTSEEEEEEEGGG---------------CCHHHHHHHHHHTCCEEECCCB
T ss_pred CCEEEEEcC-CC--HHHHHHHHHHHHhhCCCCCEEEEEecccc---------------hHHHHHHHHHhhcCccchhhhh
Confidence 999876421 12 23367788999999999999977533211 111222333321 110 1110
Q ss_pred CceeEEEeeeeecceEEeecCchhHHHHHHHHhhccCchhHHHhhhhhhccccchhHHHHHhccccccC-CchHHHHHHH
Q 043471 198 NSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVST-GGIETTKEFV 276 (485)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 276 (485)
.. ....+. ....... ........|. .....+. -....+.|.. ......+.++
T Consensus 163 ~~-~~~~~~--------~~~~~~~--------~~~~~~~~~~--~~~~~~~--------~~~~pg~Fs~~~~d~~~~~ll 215 (375)
T 4dcm_A 163 KK-ARLINC--------TFNEPQL--------ADAPQTVSWK--LEGTDWT--------IHNHANVFSRTGLDIGARFFM 215 (375)
T ss_dssp TT-EEEEEE--------CCCCCCC--------CCCCSCEEEE--ETTTTEE--------EEECTTCTTCSSCCHHHHHHH
T ss_pred ce-eEEEEE--------eCCCCCC--------CCCCCceEEE--ecCCceE--------EEeCCCcccCCcccHHHHHHH
Confidence 10 000000 0000000 0000000010 0000000 0001122222 2223455677
Q ss_pred HHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC----CCeEEEEccCCCCCCCCCCcc
Q 043471 277 AKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK----CSVEFEVADCTKKTYPENSFD 351 (485)
Q Consensus 277 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~----~~i~~~~~d~~~~~~~~~~fD 351 (485)
+.+...++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+ .++++..+|+.+ ++++++||
T Consensus 216 ~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD 294 (375)
T 4dcm_A 216 QHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFN 294 (375)
T ss_dssp HTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEE
T ss_pred HhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCee
Confidence 88877777899999999999999999986 6799999999999999999876332 257889999987 56678999
Q ss_pred EEEEcccccccC-----CHHHHHHHHHhcCCCCcEEEEEe
Q 043471 352 VIYSRDTILHIQ-----DKPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 352 ~i~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
+|+++..+++.. ....+++++.++|||||++++..
T Consensus 295 ~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 295 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp EEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 999999987642 23468999999999999999974
No 179
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.67 E-value=2.3e-16 Score=144.00 Aligned_cols=115 Identities=20% Similarity=0.330 Sum_probs=96.0
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC-CCeEEEEeeccCCCCCCCCCCe
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF-ENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
...+++.++. +.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.... .+++++++|+.+ +++++++|
T Consensus 29 ~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~~~~ 104 (227)
T 1ve3_A 29 EPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK--LSFEDKTF 104 (227)
T ss_dssp HHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS--CCSCTTCE
T ss_pred HHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc--CCCCCCcE
Confidence 3444555443 789999999999999999999889999999999999999875322 579999999988 55667899
Q ss_pred eEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 122 DMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 122 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
|+|+++.++++....+...+++++.++|+|||.+++.++.
T Consensus 105 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 105 DYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9999999866665555789999999999999999998764
No 180
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.67 E-value=2.5e-16 Score=138.98 Aligned_cols=147 Identities=16% Similarity=0.181 Sum_probs=102.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCC-CCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKT-YPEN 348 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~-~~~~ 348 (485)
....++.. .++++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++...+ .++++.+.+...++ +.++
T Consensus 11 ~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 88 (185)
T 3mti_A 11 MSHDFLAE-VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVRE 88 (185)
T ss_dssp HHHHHHHT-TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCS
T ss_pred HHHHHHHH-hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccC
Confidence 34444444 4678899999999999999999988 8899999999999999999886322 57999997777642 4468
Q ss_pred CccEEEEccc-ccc--------cCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHH
Q 043471 349 SFDVIYSRDT-ILH--------IQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQML 419 (485)
Q Consensus 349 ~fD~i~~~~~-~~~--------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 419 (485)
+||+|+++.. +.+ ..+...+++++.++|||||++++..+......... .. ....+.+.+
T Consensus 89 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-~~-----------~~~~~~~~l 156 (185)
T 3mti_A 89 PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDME-KD-----------AVLEYVIGL 156 (185)
T ss_dssp CEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHH-HH-----------HHHHHHHHS
T ss_pred CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHH-HH-----------HHHHHHHhC
Confidence 8999998732 222 13456788999999999999999876433221111 00 123455555
Q ss_pred HhCCCeEEEEee
Q 043471 420 KDAGFVDIIAED 431 (485)
Q Consensus 420 ~~aGf~~~~~~~ 431 (485)
...+|.+.....
T Consensus 157 ~~~~~~~~~~~~ 168 (185)
T 3mti_A 157 DQRVFTAMLYQP 168 (185)
T ss_dssp CTTTEEEEEEEE
T ss_pred CCceEEEEEehh
Confidence 567788776654
No 181
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.67 E-value=4e-17 Score=155.09 Aligned_cols=109 Identities=12% Similarity=0.161 Sum_probs=85.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCCCC--------CeEEEEeeccC------CCCCCC
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGHFE--------NVKFMCADVTS------PDLTFS 117 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~~~--------~~~~~~~d~~~------~~~~~~ 117 (485)
.++.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|+++....+ +++|.++|+.. +..+++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 34789999999999877666555 5799999999999999998753211 26788888732 112356
Q ss_pred CCCeeEEEhhhhhhcc-ChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 118 EDSVDMMFSNWLLMYL-SDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+++||+|+|..++||+ .......++++++++|||||+++++.++
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999999999885 3233679999999999999999998764
No 182
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.67 E-value=6.9e-16 Score=143.29 Aligned_cols=109 Identities=15% Similarity=0.245 Sum_probs=92.3
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhH-HHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCC
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGD-FYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~-~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
+.-+..+.++++.+|||||||+|.++ ..+++..+++|+|+|+|+.|++.|++++. ++ .+++++++|+.+++ +++
T Consensus 112 ~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~ 188 (298)
T 3fpf_A 112 KNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLE 188 (298)
T ss_dssp HHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCC
T ss_pred HHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCC
Confidence 33345678899999999999999766 44555458899999999999999999875 45 68999999998875 689
Q ss_pred ccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 350 FDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 350 fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
||+|++... .+++.++++++.++|||||++++.+.
T Consensus 189 FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 189 FDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 999998654 57999999999999999999999864
No 183
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.67 E-value=6.7e-16 Score=134.15 Aligned_cols=118 Identities=19% Similarity=0.167 Sum_probs=99.5
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcccccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTILH 361 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 361 (485)
.++.+|||+|||+|.++..++++ + +|+|+|+|+.|++. ..++++.++|+.+ ++++++||+|+++..+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES--------HRGGNLVRADLLC-SINQESVDVVVFNPPYVP 90 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT--------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBT
T ss_pred CCCCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc--------ccCCeEEECChhh-hcccCCCCEEEECCCCcc
Confidence 45679999999999999999988 4 99999999999987 2378999999987 566689999999998887
Q ss_pred cCCH---------HHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 362 IQDK---------PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 362 ~~~~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
.++. ..+++++.+.| |||++++..... ...+++.++++++||+.+.+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------------------~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 91 DTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------------------NRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp TCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------------------GCHHHHHHHHHHTTCEEEEEEE
T ss_pred CCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------------------CCHHHHHHHHHHCCCcEEEEEe
Confidence 6544 67889999999 999999985321 2467899999999999887654
No 184
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.66 E-value=2.3e-16 Score=142.80 Aligned_cols=122 Identities=19% Similarity=0.253 Sum_probs=101.6
Q ss_pred HHHHHc-CCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccE
Q 043471 274 EFVAKL-DLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDV 352 (485)
Q Consensus 274 ~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 352 (485)
.+++.+ ...++.+|||||||+|.++..++ .+++|+|+|+. ++.+..+|+.++++++++||+
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~--------------~~~~~~~d~~~~~~~~~~fD~ 118 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIR----NPVHCFDLASL--------------DPRVTVCDMAQVPLEDESVDV 118 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS--------------STTEEESCTTSCSCCTTCEEE
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC--------------CceEEEeccccCCCCCCCEeE
Confidence 344444 24567899999999999988773 58999999987 467889999998888899999
Q ss_pred EEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeec
Q 043471 353 IYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 353 i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 432 (485)
|++..++|+ .++..+++++.++|+|||++++.++.. ...+.+++.++++++||+++.....
T Consensus 119 v~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~------------------~~~~~~~~~~~l~~~Gf~~~~~~~~ 179 (215)
T 2zfu_A 119 AVFCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS------------------RFEDVRTFLRAVTKLGFKIVSKDLT 179 (215)
T ss_dssp EEEESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG------------------GCSCHHHHHHHHHHTTEEEEEEECC
T ss_pred EEEehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC------------------CCCCHHHHHHHHHHCCCEEEEEecC
Confidence 999999975 899999999999999999999987542 1237899999999999999876543
No 185
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.66 E-value=4.1e-16 Score=144.78 Aligned_cols=116 Identities=23% Similarity=0.362 Sum_probs=95.8
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC-CCeEEEEeeccCCCCCCCCCCe
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF-ENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
...++..+...++.+|||+|||+|.++..|++.+.+|+|+|+|+.|++.|+++.... .+++++++|+.+. ++ .++|
T Consensus 30 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~--~~-~~~f 106 (252)
T 1wzn_A 30 VEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI--AF-KNEF 106 (252)
T ss_dssp HHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC--CC-CSCE
T ss_pred HHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhc--cc-CCCc
Confidence 345556666667889999999999999999999999999999999999999875422 3799999999884 33 3689
Q ss_pred eEEEhh-hhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 122 DMMFSN-WLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 122 D~v~~~-~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
|+|++. .+++|++.+....+++++.++|+|||.+++..++
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 999986 4567777666889999999999999999986543
No 186
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.66 E-value=9.3e-16 Score=134.31 Aligned_cols=135 Identities=18% Similarity=0.166 Sum_probs=107.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCC-CCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTK-KTYP 346 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~-~~~~ 346 (485)
....+++.+...++.+|||+|||+|.++..+++.. +.+++|+|+|+.+++.|++++...+ .++ ++.+|..+ ++..
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 44567777788889999999999999999999886 6799999999999999999876543 367 77888754 2322
Q ss_pred CCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeE
Q 043471 347 ENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVD 426 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 426 (485)
+++||+|++..+++| ..+++++.++|||||++++..... .+...+.+.++..|+++
T Consensus 92 ~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~--------------------~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV--------------------ESEQMLWALRKQFGGTI 147 (178)
T ss_dssp CSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH--------------------HHHHHHHHHHHHHCCEE
T ss_pred CCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc--------------------ccHHHHHHHHHHcCCee
Confidence 278999999999887 788999999999999999986432 12356778888888887
Q ss_pred EEEe
Q 043471 427 IIAE 430 (485)
Q Consensus 427 ~~~~ 430 (485)
..+.
T Consensus 148 ~~~~ 151 (178)
T 3hm2_A 148 SSFA 151 (178)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 187
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.65 E-value=5.6e-16 Score=159.65 Aligned_cols=118 Identities=10% Similarity=0.202 Sum_probs=101.1
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc---CcEEEEeCChHHHHHHHHHcC--------CCCCeEEEEeecc
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA---GHVIALDFIDSVIKKNEEVNG--------HFENVKFMCADVT 110 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~~~~a~~~~~--------~~~~~~~~~~d~~ 110 (485)
....+++.+...++.+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|+++.. ..++++++++|+.
T Consensus 709 Rle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 709 RVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 34456666666688999999999999999999987 699999999999999988432 2357999999999
Q ss_pred CCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 111 SPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 111 ~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
+ +++++++||+|++..+++|++++....+++++.++|||| .+++++++.
T Consensus 789 d--Lp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 789 E--FDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp S--CCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred h--CCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 8 666789999999999999999877778999999999999 888877654
No 188
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.65 E-value=8.9e-17 Score=147.75 Aligned_cols=117 Identities=14% Similarity=0.159 Sum_probs=90.5
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCC-CCeEEEEeeccCCCCCCCCCCe
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHF-ENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
..+...+ ..++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++.... .+++++++|+.+...++++++|
T Consensus 51 ~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~f 129 (236)
T 1zx0_A 51 HALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp HHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCE
T ss_pred HHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCce
Confidence 3443333 45678999999999999999988654 8999999999999999976432 4799999999883126788999
Q ss_pred eEEEh-hhhh--hccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 122 DMMFS-NWLL--MYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 122 D~v~~-~~~~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
|+|++ .+.+ +.......+.++++++++|||||++++.+..
T Consensus 130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred EEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 99999 4432 2222333668899999999999999986543
No 189
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.65 E-value=1.2e-16 Score=154.52 Aligned_cols=139 Identities=18% Similarity=0.318 Sum_probs=102.7
Q ss_pred HHHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHH
Q 043471 11 EIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVI 89 (485)
Q Consensus 11 ~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~ 89 (485)
..+..||+.+.....+..++.+... ....++.+.+.+...++.+|||||||+|.++..+++.|. +|+|+|+|+ |+
T Consensus 24 ~~d~~Y~~~y~~~~~~~~ml~d~~r---~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~ 99 (340)
T 2fyt_A 24 DEDGVYFSSYGHYGIHEEMLKDKIR---TESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-IL 99 (340)
T ss_dssp ------CCGGGSHHHHHHHHTCHHH---HHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HH
T ss_pred cchhhHHHhhcchhHHHHHhcCHHH---HHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HH
Confidence 4456688876665555566554221 123445666666667889999999999999999999875 899999997 99
Q ss_pred HHHHHHcC---CCCCeEEEEeeccCCCCCCCCCCeeEEEhhhh---hhccChHHHHHHHHHHHhhcccCcEEEE
Q 043471 90 KKNEEVNG---HFENVKFMCADVTSPDLTFSEDSVDMMFSNWL---LMYLSDKEVEKLAERMVKWLKVGGYIFF 157 (485)
Q Consensus 90 ~~a~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~---~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 157 (485)
+.|+++.. ..++++++++|+.+ +++++++||+|++..+ +.+... ...++.++.++|||||.++.
T Consensus 100 ~~a~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~~D~Ivs~~~~~~l~~~~~--~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 100 YQAMDIIRLNKLEDTITLIKGKIEE--VHLPVEKVDVIISEWMGYFLLFESM--LDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp HHHHHHHHHTTCTTTEEEEESCTTT--SCCSCSCEEEEEECCCBTTBTTTCH--HHHHHHHHHHHEEEEEEEES
T ss_pred HHHHHHHHHcCCCCcEEEEEeeHHH--hcCCCCcEEEEEEcCchhhccCHHH--HHHHHHHHHhhcCCCcEEEc
Confidence 99988643 22589999999988 5567789999998764 444444 67899999999999999874
No 190
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.65 E-value=7.5e-16 Score=150.27 Aligned_cols=147 Identities=14% Similarity=0.185 Sum_probs=114.7
Q ss_pred HHHc--CCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccE
Q 043471 276 VAKL--DLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDV 352 (485)
Q Consensus 276 ~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 352 (485)
++.+ .+.++.+|||||||+|.++..+++++ +.+++++|+ +.+++.|++. .++++..+|+.+ +++ .||+
T Consensus 179 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~p--~~D~ 249 (352)
T 1fp2_A 179 LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-----NNLTYVGGDMFT-SIP--NADA 249 (352)
T ss_dssp HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-----TTEEEEECCTTT-CCC--CCSE
T ss_pred HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-----CCcEEEeccccC-CCC--CccE
Confidence 4444 35567899999999999999999886 679999999 9999887642 259999999976 555 3999
Q ss_pred EEEcccccccCCHH--HHHHHHHhcCCC---CcEEEEEecccCCCCCCh---hHHHHHHh----cCCCCCCHHHHHHHHH
Q 043471 353 IYSRDTILHIQDKP--ALFKSFFKWLKP---GGTVLISDYCKSFGTPSV---EFSEYIKQ----RGYDLHDVKSYGQMLK 420 (485)
Q Consensus 353 i~~~~~~~~~~~~~--~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~l~ 420 (485)
|++..++||+++.. .+|++++++||| ||++++.+.......... ........ .+...++.++|.++++
T Consensus 250 v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~ 329 (352)
T 1fp2_A 250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFI 329 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHH
T ss_pred EEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHH
Confidence 99999999998877 999999999999 999999987665433221 11111110 1124568899999999
Q ss_pred hCCCeEEEEee
Q 043471 421 DAGFVDIIAED 431 (485)
Q Consensus 421 ~aGf~~~~~~~ 431 (485)
++||+++.+..
T Consensus 330 ~aGf~~~~~~~ 340 (352)
T 1fp2_A 330 EAGFQHYKISP 340 (352)
T ss_dssp HTTCCEEEEEE
T ss_pred HCCCCeeEEEe
Confidence 99999988765
No 191
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.65 E-value=2.4e-16 Score=151.48 Aligned_cols=124 Identities=16% Similarity=0.262 Sum_probs=103.8
Q ss_pred chHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCC-EEEEEeCCHHHHHHHHHHhc---------CC-CCCeEEE
Q 043471 268 GIETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDV-HVVGIDLSINMISFALERAI---------GL-KCSVEFE 336 (485)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~---------~~-~~~i~~~ 336 (485)
....+..+++.+.+.++.+|||||||+|.++..++...++ +++|||+|+.+++.|+++.. ++ ..+++++
T Consensus 158 ~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi 237 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE 237 (438)
T ss_dssp HHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 3467888999999999999999999999999999987666 59999999999999987531 33 2589999
Q ss_pred EccCCCCCCCC--CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCC
Q 043471 337 VADCTKKTYPE--NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFG 392 (485)
Q Consensus 337 ~~d~~~~~~~~--~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 392 (485)
++|+.++++.+ ..||+|+++..+ +.++....|++++|+|||||++++.+...+..
T Consensus 238 ~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d 294 (438)
T 3uwp_A 238 RGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPLN 294 (438)
T ss_dssp ECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCTT
T ss_pred ECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCCC
Confidence 99999987643 479999998765 45788899999999999999999997665543
No 192
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.65 E-value=1.3e-15 Score=137.70 Aligned_cols=116 Identities=19% Similarity=0.300 Sum_probs=98.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCc
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSF 350 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~f 350 (485)
.+..++... +.++.+|||+|||+|.++..+++....+++|+|+|+.+++.|+++... ..++++..+|+.++++++++|
T Consensus 31 ~~~~~l~~~-~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~i~~~~~d~~~~~~~~~~f 108 (215)
T 2pxx_A 31 SFRALLEPE-LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-VPQLRWETMDVRKLDFPSASF 108 (215)
T ss_dssp HHHHHHGGG-CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-CTTCEEEECCTTSCCSCSSCE
T ss_pred HHHHHHHHh-cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-CCCcEEEEcchhcCCCCCCcc
Confidence 344555444 467889999999999999999987323899999999999999998764 247999999999988888899
Q ss_pred cEEEEcccccccC---------------CHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 351 DVIYSRDTILHIQ---------------DKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 351 D~i~~~~~~~~~~---------------~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
|+|++..+++++. +...+++++.++|||||++++.++.
T Consensus 109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 9999999887664 5688999999999999999998754
No 193
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.65 E-value=1.1e-15 Score=142.15 Aligned_cols=170 Identities=16% Similarity=0.276 Sum_probs=119.6
Q ss_pred eEEeecCchhHHHHHHHHhhccCchhHHHhhhhhhccccchhHHHHHhc------cccccCCc-hHHHH-HHHHHcCCCC
Q 043471 212 AYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFG------VGFVSTGG-IETTK-EFVAKLDLKP 283 (485)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~-~~~~~~~~~~ 283 (485)
..+...+......++...+.......+..|++......+ ..++..+.. ..|++... .+... .++.. .+
T Consensus 30 i~~~~~k~~~~~~Rl~~r~~~~~~~~~~~y~~~l~~~~~-~~e~~~l~~~lt~~~t~FfRd~~~f~~l~~~llp~---~~ 105 (274)
T 1af7_A 30 IVLADHKRDMVYNRLVRRLRALGLDDFGRYLSMLEANQN-SAEWQAFINALTTNLTAFFREAHHFPILAEHARRR---HG 105 (274)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHHTCCCHHHHHHHHHHCTT-CTHHHHHHHHHCCCCCCTTTTTTHHHHHHHHHHHS---CS
T ss_pred CCCchhhHHHHHHHHHHHHHHcCCCCHHHHHHHHccCCC-HHHHHHHHHHHhhcCccccCChHHHHHHHHHccCC---CC
Confidence 345556666777788887777777778888887543111 112333221 23444322 22233 34444 24
Q ss_pred CCEEEEECCCCCh----hHHHHhhcC-----CCEEEEEeCCHHHHHHHHHHhcC-----------------------C--
Q 043471 284 GQKVLDVGCGIGG----GDFYMADKF-----DVHVVGIDLSINMISFALERAIG-----------------------L-- 329 (485)
Q Consensus 284 ~~~vLDiGcG~G~----~~~~l~~~~-----~~~v~g~D~s~~~~~~a~~~~~~-----------------------~-- 329 (485)
+.+|||+|||||. +++.+++.. +.+|+|+|+|+.|++.|+++... .
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5799999999998 566666542 25999999999999999987410 0
Q ss_pred -------CCCeEEEEccCCCCCCC-CCCccEEEEcccccccCCH--HHHHHHHHhcCCCCcEEEEE
Q 043471 330 -------KCSVEFEVADCTKKTYP-ENSFDVIYSRDTILHIQDK--PALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 330 -------~~~i~~~~~d~~~~~~~-~~~fD~i~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~ 385 (485)
..+|.|.+.|+.+.|++ .++||+|+|.++++|+++. .++++++++.|+|||++++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 13689999999986665 5789999999999999654 78999999999999999885
No 194
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.64 E-value=5.4e-16 Score=159.79 Aligned_cols=119 Identities=13% Similarity=0.137 Sum_probs=100.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC--CEEEEEeCCHHHHHHHHHHhcC-------CCCCeEEEEccC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD--VHVVGIDLSINMISFALERAIG-------LKCSVEFEVADC 340 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~-------~~~~i~~~~~d~ 340 (485)
.....+++.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++.. ...++++.++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 4455666666666788999999999999999998852 6999999999999999986541 113799999999
Q ss_pred CCCCCCCCCccEEEEcccccccCCHH--HHHHHHHhcCCCCcEEEEEeccc
Q 043471 341 TKKTYPENSFDVIYSRDTILHIQDKP--ALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 341 ~~~~~~~~~fD~i~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
.++++++++||+|++..+++|+++.. .+++++.++|||| .++++++..
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99998889999999999999998755 5899999999999 888887654
No 195
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.64 E-value=7.3e-16 Score=141.98 Aligned_cols=129 Identities=16% Similarity=0.159 Sum_probs=102.6
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCC---CCCccEEEE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYP---ENSFDVIYS 355 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~---~~~fD~i~~ 355 (485)
+.++.+|||||||+|..+..++... +.+|+|+|+|+.|++.|+++....+ .+++++++|+.+++++ +++||+|++
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 3567899999999999999998643 6799999999999999999876333 2699999999877653 578999999
Q ss_pred cccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 356 RDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 356 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
.. +.+...+++++.++|||||++++..... ... ....+.+.++.+||+++....
T Consensus 148 ~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~----~~~--------------~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 148 RA----VARLSVLSELCLPLVKKNGLFVALKAAS----AEE--------------ELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp EC----CSCHHHHHHHHGGGEEEEEEEEEEECC-----CHH--------------HHHHHHHHHHHTTEEEEEEEE
T ss_pred ec----cCCHHHHHHHHHHhcCCCCEEEEEeCCC----chH--------------HHHHHHHHHHHcCCeEeEEEE
Confidence 76 4678999999999999999998873111 000 134677889999999877654
No 196
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.64 E-value=1.1e-15 Score=136.98 Aligned_cols=133 Identities=17% Similarity=0.101 Sum_probs=108.0
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPD 113 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~ 113 (485)
...+.+..++..+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+++++.|+++.. ..++++++++|+.+.
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~- 102 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG- 102 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT-
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh-
Confidence 455666788889988899999999999999999999986 799999999999999998653 225899999998653
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcce
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQI 192 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (485)
....++||+|++..+++ + ...+++++.++|+|||.+++...... ..+.+...+++.||
T Consensus 103 -~~~~~~~D~i~~~~~~~---~--~~~~l~~~~~~LkpgG~l~~~~~~~~---------------~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 103 -LDDLPDPDRVFIGGSGG---M--LEEIIDAVDRRLKSEGVIVLNAVTLD---------------TLTKAVEFLEDHGY 160 (204)
T ss_dssp -CTTSCCCSEEEESCCTT---C--HHHHHHHHHHHCCTTCEEEEEECBHH---------------HHHHHHHHHHHTTC
T ss_pred -hhcCCCCCEEEECCCCc---C--HHHHHHHHHHhcCCCeEEEEEecccc---------------cHHHHHHHHHHCCC
Confidence 22347899999987665 3 56899999999999999999755321 34567778888886
No 197
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.64 E-value=5.2e-16 Score=150.51 Aligned_cols=148 Identities=14% Similarity=0.166 Sum_probs=115.7
Q ss_pred HHHhccCCC--CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCC
Q 043471 44 PEVLSLLPP--YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTF 116 (485)
Q Consensus 44 ~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~ 116 (485)
..+++.++. .++.+|||||||+|..+..+++. +.+|+++|+| .+++.|+++... .++++++.+|+.+. ++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~ 229 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY 229 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC
Confidence 455666665 67889999999999999999988 6799999999 999999987432 24699999999873 34
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc-----------CCCCCCCCChhHHHH
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR-----------KHNPTHYREPRFYSK 185 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 185 (485)
+. .||+|++..++||++++...++++++.++|+|||++++.+........... ........+.+.|.+
T Consensus 230 ~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 308 (335)
T 2r3s_A 230 GN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYES 308 (335)
T ss_dssp CS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHH
T ss_pred CC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHH
Confidence 44 499999999999998877889999999999999999998876543211100 000233457889999
Q ss_pred HhhhcceecC
Q 043471 186 VFKECQIQDA 195 (485)
Q Consensus 186 ~~~~~~~~~~ 195 (485)
+++++||...
T Consensus 309 ll~~aGf~~~ 318 (335)
T 2r3s_A 309 MFSNAGFSHS 318 (335)
T ss_dssp HHHHTTCSEE
T ss_pred HHHHCCCCee
Confidence 9999999543
No 198
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.64 E-value=1.3e-16 Score=144.33 Aligned_cols=150 Identities=15% Similarity=0.234 Sum_probs=108.4
Q ss_pred HHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHH
Q 043471 12 IQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIK 90 (485)
Q Consensus 12 ~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~ 90 (485)
..+.||+..+..+......+......|.......+++.+. ..++.+|||||||+|.++..++ .+|+|+|+|+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~--- 97 (215)
T 2zfu_A 24 AAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIR---NPVHCFDLASL--- 97 (215)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS---
T ss_pred HHHHHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC---
Confidence 3456666654444322222211222234434444555543 3567899999999999988873 79999999997
Q ss_pred HHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc
Q 043471 91 KNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR 170 (485)
Q Consensus 91 ~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 170 (485)
+++++++|+.+ +++++++||+|+++.++|+ .+ ...+++++.++|+|||.+++.+....
T Consensus 98 ----------~~~~~~~d~~~--~~~~~~~fD~v~~~~~l~~-~~--~~~~l~~~~~~L~~gG~l~i~~~~~~------- 155 (215)
T 2zfu_A 98 ----------DPRVTVCDMAQ--VPLEDESVDVAVFCLSLMG-TN--IRDFLEEANRVLKPGGLLKVAEVSSR------- 155 (215)
T ss_dssp ----------STTEEESCTTS--CSCCTTCEEEEEEESCCCS-SC--HHHHHHHHHHHEEEEEEEEEEECGGG-------
T ss_pred ----------CceEEEecccc--CCCCCCCEeEEEEehhccc-cC--HHHHHHHHHHhCCCCeEEEEEEcCCC-------
Confidence 57789999988 5677889999999999875 55 67999999999999999999876421
Q ss_pred CCCCCCCCChhHHHHHhhhcceecC
Q 043471 171 KHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
..+.+.+...++++||...
T Consensus 156 ------~~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 156 ------FEDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp ------CSCHHHHHHHHHHTTEEEE
T ss_pred ------CCCHHHHHHHHHHCCCEEE
Confidence 1277889999999999653
No 199
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.63 E-value=1.9e-15 Score=134.05 Aligned_cols=117 Identities=18% Similarity=0.205 Sum_probs=100.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CC--eEEEEccCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CS--VEFEVADCTKKTYP 346 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~--i~~~~~d~~~~~~~ 346 (485)
.....+++.+...++.+|||+|||+|.++..+++. +.+++|+|+++.+++.|++++...+ .+ +++..+|+.+. ++
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~ 116 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-VK 116 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-CT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-cc
Confidence 56677888888888999999999999999999988 8899999999999999999876433 23 99999999873 45
Q ss_pred CCCccEEEEcccccc-cCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 347 ENSFDVIYSRDTILH-IQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+++||+|++..++++ ..+...+++++.++|+|||.+++....
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 678999999988877 356789999999999999999999654
No 200
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.63 E-value=8.5e-16 Score=143.35 Aligned_cols=100 Identities=15% Similarity=0.222 Sum_probs=88.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhcc
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYL 133 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~ 133 (485)
++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++.. . .++++|+.+ +++++++||+|++..++.|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~--~--~~~~~d~~~--~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV--K--NVVEAKAED--LPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC--S--CEEECCTTS--CCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC--C--CEEECcHHH--CCCCCCCEEEEEEcchhhhc
Confidence 67899999999999999999999999999999999999999865 2 289999988 55678899999998766665
Q ss_pred -ChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 134 -SDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 134 -~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++ ...+++++.++|+|||.+++..++
T Consensus 128 ~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 128 VEN--KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CSC--HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ccc--HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 55 679999999999999999998665
No 201
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.63 E-value=2.6e-15 Score=135.71 Aligned_cols=129 Identities=16% Similarity=0.200 Sum_probs=103.2
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCC--CCCCCccEEEEcc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKT--YPENSFDVIYSRD 357 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~--~~~~~fD~i~~~~ 357 (485)
.++.+|||||||+|.++..+++.. +.+++|+|+|+.+++.|++++...+ .++.++.+|+.+++ +++++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 357799999999999999999886 5799999999999999999875322 48999999999876 6778999999986
Q ss_pred cccccC--------CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEE
Q 043471 358 TILHIQ--------DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIA 429 (485)
Q Consensus 358 ~~~~~~--------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 429 (485)
...+.. ....+++++.++|+|||.+++..... . ....+.+.++++||+.+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------~-------------~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR-------G-------------LFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH-------H-------------HHHHHHHHHHHHTCEEEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH-------H-------------HHHHHHHHHHHCCCeeeec
Confidence 644332 23689999999999999999974211 0 1245677888899988776
Q ss_pred e
Q 043471 430 E 430 (485)
Q Consensus 430 ~ 430 (485)
.
T Consensus 180 ~ 180 (214)
T 1yzh_A 180 W 180 (214)
T ss_dssp E
T ss_pred c
Confidence 5
No 202
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.63 E-value=5.1e-16 Score=137.00 Aligned_cols=109 Identities=18% Similarity=0.222 Sum_probs=84.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCCCCCeeEEEhhh-
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFSEDSVDMMFSNW- 128 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~- 128 (485)
..++.+|||+|||+|.++..|++.+.+|+|+|+|+.|++.|+++... .+++++++.+...+. .+.+++||+|+++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~-~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD-HYVREPIRAAIFNLG 98 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG-GTCCSCEEEEEEEEC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH-hhccCCcCEEEEeCC
Confidence 35688999999999999999999999999999999999999987532 258999998877632 13467899998873
Q ss_pred hhhc-----c-ChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 129 LLMY-----L-SDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 129 ~~~~-----~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
.+++ . .......+++++.++|||||.+++....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 2222 0 1233668899999999999999997654
No 203
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.63 E-value=7.2e-16 Score=144.45 Aligned_cols=118 Identities=18% Similarity=0.234 Sum_probs=95.4
Q ss_pred HHhccCC-CCCCCcEEEEcCCC---CcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCC----
Q 043471 45 EVLSLLP-PYEGKTVLEFGAGI---GRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDL---- 114 (485)
Q Consensus 45 ~~~~~~~-~~~~~~vLDiGcG~---G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~---- 114 (485)
++++.+. .....+|||||||+ |.++..+.+. +.+|+|+|+|+.|++.|+++....++++++++|+.+.+.
T Consensus 67 ~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~ 146 (274)
T 2qe6_A 67 RGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNH 146 (274)
T ss_dssp HHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHS
T ss_pred HHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhcc
Confidence 3344444 23447999999999 9887766664 579999999999999999988655689999999976321
Q ss_pred -----CCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 115 -----TFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 115 -----~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
.++.++||+|+++.++||+++.....++++++++|+|||+|++++...
T Consensus 147 ~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 147 PDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred chhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 123358999999999999987667899999999999999999998764
No 204
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.63 E-value=1.9e-15 Score=140.77 Aligned_cols=135 Identities=14% Similarity=0.147 Sum_probs=106.3
Q ss_pred HHHcCCC-CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCC--CCCCCc
Q 043471 276 VAKLDLK-PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKT--YPENSF 350 (485)
Q Consensus 276 ~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~--~~~~~f 350 (485)
...+.++ ++.+|||+|||+|.++..++++...+|+|+|+++.+++.|++++. ++..+++++++|+.+.+ +++++|
T Consensus 41 ~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 41 AKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp HHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCE
T ss_pred HHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCc
Confidence 3344666 789999999999999999999865599999999999999999886 44457999999998864 457899
Q ss_pred cEEEEccccccc--------------------CCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCC
Q 043471 351 DVIYSRDTILHI--------------------QDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLH 410 (485)
Q Consensus 351 D~i~~~~~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (485)
|+|+++..+... .+...+++.+.++|||||++++... ..
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---------------------~~ 179 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR---------------------PE 179 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC---------------------TT
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc---------------------HH
Confidence 999998665433 1246799999999999999999621 12
Q ss_pred CHHHHHHHHHhCCCeEEEEee
Q 043471 411 DVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 411 ~~~~~~~~l~~aGf~~~~~~~ 431 (485)
...++.+.+++.||....+..
T Consensus 180 ~~~~~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 180 RLLDIIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp THHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHCCCceEEEEE
Confidence 355677888888888776554
No 205
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=1.8e-15 Score=136.41 Aligned_cols=108 Identities=19% Similarity=0.328 Sum_probs=91.8
Q ss_pred ccCCCCCCCcEEEEcCCCCcchHHHHhh-c--CcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCC-CCCCCCCeeE
Q 043471 48 SLLPPYEGKTVLEFGAGIGRFTGELAKK-A--GHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPD-LTFSEDSVDM 123 (485)
Q Consensus 48 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~D~ 123 (485)
+.+++++|.+|||+|||+|.++..+++. | .+|+|+|+|+.|++.+++++...+|+..+.+|...+. .++..+++|+
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEE
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEE
Confidence 4567889999999999999999999997 4 4799999999999999998887789999999987753 3456789999
Q ss_pred EEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 124 MFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 124 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
|++. +.|..+ ...++.++++.|||||.++++.
T Consensus 151 Vf~d--~~~~~~--~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 151 LYAD--VAQPEQ--AAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEC--CCCTTH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEe--ccCChh--HHHHHHHHHHhccCCCEEEEEE
Confidence 9874 344444 5689999999999999999864
No 206
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.63 E-value=5.8e-16 Score=135.45 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=100.7
Q ss_pred HHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCC---CCCCccEE
Q 043471 277 AKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTY---PENSFDVI 353 (485)
Q Consensus 277 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~---~~~~fD~i 353 (485)
..+++++|.+|||+|||. +++|+|+.|++.|+++... ++++.++|+.++++ ++++||+|
T Consensus 6 ~~~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 6 ADFGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp TTTTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred hccCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEE
Confidence 344678999999999995 2399999999999998643 58999999998876 78899999
Q ss_pred EEccccccc-CCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 354 YSRDTILHI-QDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 354 ~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
++..+++|+ ++...++++++|+|||||++++.++....... .....+.+++.++|+++|| +. +..
T Consensus 68 ~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~aGf-i~-~~~ 133 (176)
T 2ld4_A 68 LSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDN-----------NSKVKTASKLCSALTLSGL-VE-VKE 133 (176)
T ss_dssp EECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS-----------SSSSCCHHHHHHHHHHTTC-EE-EEE
T ss_pred EECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccccccccc-----------ccccCCHHHHHHHHHHCCC-cE-eec
Confidence 999999999 99999999999999999999997543221110 1223578999999999999 44 443
No 207
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.63 E-value=3e-16 Score=153.98 Aligned_cols=143 Identities=20% Similarity=0.259 Sum_probs=108.7
Q ss_pred HHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHH
Q 043471 12 IQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIK 90 (485)
Q Consensus 12 ~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~ 90 (485)
....||+.++..+.+..++.+.. .....++.+++.+...++.+|||||||+|.++..+++.|. +|+|+|+| +|++
T Consensus 24 ~~~~yf~~ya~~~~~~~~l~d~~---r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~ 99 (376)
T 3r0q_C 24 DYAQYFCTYSFLYHQKDMLSDRV---RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMAD 99 (376)
T ss_dssp ----CTTGGGCHHHHHHHHTCHH---HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHH
T ss_pred cHHHHHHHHHHhHHHHHHhcChH---HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHH
Confidence 44678888777777777765432 1224456666767778899999999999999999999987 99999999 9999
Q ss_pred HHHHHcC---CCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccCh-HHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 91 KNEEVNG---HFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSD-KEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 91 ~a~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
.|+++.. ...+++++++|+.+++ ++ ++||+|++..+.+++.. .....+++++.++|+|||.++++...
T Consensus 100 ~a~~~~~~~~~~~~v~~~~~d~~~~~--~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 100 HARALVKANNLDHIVEVIEGSVEDIS--LP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp HHHHHHHHTTCTTTEEEEESCGGGCC--CS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred HHHHHHHHcCCCCeEEEEECchhhcC--cC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 9988643 2246999999999844 44 89999999776666532 23678999999999999999885443
No 208
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.63 E-value=3e-16 Score=143.20 Aligned_cols=114 Identities=12% Similarity=0.083 Sum_probs=94.0
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCC-CCCeeEEEhhhhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFS-EDSVDMMFSNWLLM 131 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~D~v~~~~~~~ 131 (485)
.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++. ++++++++|+.+. ++++ +++||+|+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~-~~~~~~~~fD~v~~~---- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANA---PHADVYEWNGKGE-LPAGLGAPFGLIVSR---- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHC---TTSEEEECCSCSS-CCTTCCCCEEEEEEE----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhC---CCceEEEcchhhc-cCCcCCCCEEEEEeC----
Confidence 56789999999999999999999999999999999999999983 6899999999532 6667 7899999987
Q ss_pred ccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 132 YLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
.+ ...+++++.++|||||.++... .....+.+...+.++||..
T Consensus 119 --~~--~~~~l~~~~~~LkpgG~l~~~~----------------~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 119 --RG--PTSVILRLPELAAPDAHFLYVG----------------PRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp --SC--CSGGGGGHHHHEEEEEEEEEEE----------------SSSCCTHHHHHHHHTTCEE
T ss_pred --CC--HHHHHHHHHHHcCCCcEEEEeC----------------CcCCHHHHHHHHHHCCCeE
Confidence 22 4478999999999999998110 0114457888999999854
No 209
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.62 E-value=8.7e-16 Score=135.99 Aligned_cols=108 Identities=12% Similarity=0.135 Sum_probs=91.8
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCC--CCCCCccEEEEccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKT--YPENSFDVIYSRDT 358 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~--~~~~~fD~i~~~~~ 358 (485)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...+ .+++++++|+.+.+ +++++||+|++...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 5788999999999999998887644589999999999999999876333 47999999987753 34689999999988
Q ss_pred cccc-CCHHHHHHHHHh--cCCCCcEEEEEeccc
Q 043471 359 ILHI-QDKPALFKSFFK--WLKPGGTVLISDYCK 389 (485)
Q Consensus 359 ~~~~-~~~~~~l~~~~~--~LkpgG~l~i~~~~~ 389 (485)
+++. ++...+++++.+ +|+|||.+++.....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 8775 678899999999 999999999986544
No 210
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.62 E-value=6.2e-15 Score=144.22 Aligned_cols=149 Identities=13% Similarity=0.241 Sum_probs=116.2
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~ 117 (485)
.+.+++.++..++.+|||||||+|.++..++++ +.+|+++|+ +.+++.|+++... .++++++.+|+.+. +++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~ 255 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYP 255 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCC
Confidence 346677777777889999999999999999998 459999999 9999999987532 23699999999874 444
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcc------------ccCCCCCCCCChhHHHH
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDS------------KRKHNPTHYREPRFYSK 185 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 185 (485)
+ +|+|++..++||++++...+++++++++|+|||++++.+......... ........+.+.+.|.+
T Consensus 256 ~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ 333 (359)
T 1x19_A 256 E--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKE 333 (359)
T ss_dssp C--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHH
T ss_pred C--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHH
Confidence 3 399999999999998778899999999999999999987654332100 00111223368889999
Q ss_pred HhhhcceecCC
Q 043471 186 VFKECQIQDAS 196 (485)
Q Consensus 186 ~~~~~~~~~~~ 196 (485)
+++++||....
T Consensus 334 ll~~aGf~~v~ 344 (359)
T 1x19_A 334 ILESLGYKDVT 344 (359)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHCCCceEE
Confidence 99999996543
No 211
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.61 E-value=1.6e-15 Score=136.70 Aligned_cols=113 Identities=19% Similarity=0.133 Sum_probs=96.8
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTF 116 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~ 116 (485)
.+.....+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++... .++++++.+|+.. ...
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~ 139 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQ--GWQ 139 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG--CCG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCccc--CCc
Confidence 445567788888888899999999999999999999999999999999999999987542 3479999999987 334
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++++||+|++..+++|+++ ++.++|+|||++++....
T Consensus 140 ~~~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 ARAPFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGCCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred cCCCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 5689999999999999885 478999999999997654
No 212
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.61 E-value=3.2e-16 Score=138.81 Aligned_cols=123 Identities=12% Similarity=0.160 Sum_probs=95.5
Q ss_pred cChhhhHHHhccCCC---CCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccC
Q 043471 38 LDKEERPEVLSLLPP---YEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTS 111 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~ 111 (485)
.....++.+++.+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++... .++++++++|+.+
T Consensus 25 ~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 104 (189)
T 3p9n_A 25 TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAA 104 (189)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHH
T ss_pred CcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHH
Confidence 444555566555532 5788999999999999998888765 799999999999999987532 2589999999987
Q ss_pred CCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHh--hcccCcEEEEEecc
Q 043471 112 PDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVK--WLKVGGYIFFRESC 161 (485)
Q Consensus 112 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~--~L~pgG~l~~~~~~ 161 (485)
....+++++||+|+++..+++. .+...++++++.+ +|+|||.+++....
T Consensus 105 ~~~~~~~~~fD~i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 105 VVAAGTTSPVDLVLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHCCSSCCSEEEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHhhccCCCccEEEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 4222346899999998776654 2337799999999 99999999997654
No 213
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.61 E-value=1e-15 Score=146.81 Aligned_cols=108 Identities=20% Similarity=0.294 Sum_probs=89.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcC---------CCCCeEEEEeeccCCCC--CC--CCC
Q 043471 54 EGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNG---------HFENVKFMCADVTSPDL--TF--SED 119 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~---------~~~~~~~~~~d~~~~~~--~~--~~~ 119 (485)
++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++.. ...+++++++|+...++ ++ +++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 6789999999999999999876 6699999999999999998753 22379999999988541 13 345
Q ss_pred CeeEEEhhhhhhcc--ChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 120 SVDMMFSNWLLMYL--SDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 120 ~~D~v~~~~~~~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+||+|+|+.++||+ +.+....+++++.++|+|||.++++.+.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 99999999999998 3344779999999999999999998664
No 214
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.61 E-value=6.6e-16 Score=134.19 Aligned_cols=127 Identities=20% Similarity=0.253 Sum_probs=100.0
Q ss_pred hhhHHHhccCCC--CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCC
Q 043471 41 EERPEVLSLLPP--YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 41 ~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 118 (485)
+....+++.+.. .++.+|||+|||+|.++..+++++ +|+|+|+|+.|++. .++++++++|+.+ ++++
T Consensus 8 ~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-------~~~~~~~~~d~~~---~~~~ 76 (170)
T 3q87_B 8 EDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-------HRGGNLVRADLLC---SINQ 76 (170)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-------CSSSCEEECSTTT---TBCG
T ss_pred ccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-------ccCCeEEECChhh---hccc
Confidence 344455555544 567799999999999999999999 99999999999987 2689999999976 2355
Q ss_pred CCeeEEEhhhhhhccChH-------HHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcc
Q 043471 119 DSVDMMFSNWLLMYLSDK-------EVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQ 191 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (485)
++||+|+++..+++.++. ....+++++.+.| |||.+++..... ...+.+.+.++++|
T Consensus 77 ~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~---------------~~~~~l~~~l~~~g 140 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA---------------NRPKEVLARLEERG 140 (170)
T ss_dssp GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG---------------GCHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC---------------CCHHHHHHHHHHCC
Confidence 899999998777765432 2357889999988 999999976532 15667888999988
Q ss_pred eec
Q 043471 192 IQD 194 (485)
Q Consensus 192 ~~~ 194 (485)
|..
T Consensus 141 f~~ 143 (170)
T 3q87_B 141 YGT 143 (170)
T ss_dssp CEE
T ss_pred CcE
Confidence 854
No 215
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.61 E-value=1.9e-15 Score=142.05 Aligned_cols=133 Identities=15% Similarity=0.228 Sum_probs=107.4
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCC-C-CCeEEEEccCCCCCCCCC
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGL-K-CSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~-~-~~i~~~~~d~~~~~~~~~ 348 (485)
..+++.+.+.++.+|||+|||+|.++..+++.. +.+|+|+|+++.+++.|++++... + .++++..+|+.+ +++++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~ 178 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQ 178 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCC
Confidence 456677788899999999999999999999873 579999999999999999998654 3 479999999987 56678
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
+||+|++ +++++..+++++.++|||||++++.+... .....+.+.++++||..++
T Consensus 179 ~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~--------------------~~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 179 MYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNF--------------------DQSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp CEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSH--------------------HHHHHHHHHSGGGTEEEEE
T ss_pred CccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCH--------------------HHHHHHHHHHHHCCCeEEE
Confidence 8999998 67788999999999999999999986421 0135677888889999887
Q ss_pred Eee
Q 043471 429 AED 431 (485)
Q Consensus 429 ~~~ 431 (485)
...
T Consensus 234 ~~~ 236 (275)
T 1yb2_A 234 TVE 236 (275)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 216
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.61 E-value=4.5e-15 Score=132.92 Aligned_cols=130 Identities=15% Similarity=0.198 Sum_probs=101.8
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC--CCC-CeEEEEeeccCCCCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG--HFE-NVKFMCADVTSPDLT 115 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~--~~~-~~~~~~~d~~~~~~~ 115 (485)
..+.+..+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+++++.|+++.. ..+ +++++++|+.+. .
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~ 117 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA--L 117 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG--G
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh--c
Confidence 34556677888888889999999999999999999999999999999999999998752 223 899999998762 2
Q ss_pred CCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcce
Q 043471 116 FSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQI 192 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (485)
...+.||+|++...+ + .. +++++.++|+|||.+++...... ........+++.|+
T Consensus 118 ~~~~~~D~v~~~~~~----~--~~-~l~~~~~~LkpgG~lv~~~~~~~---------------~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 118 ADLPLPEAVFIGGGG----S--QA-LYDRLWEWLAPGTRIVANAVTLE---------------SETLLTQLHARHGG 172 (204)
T ss_dssp TTSCCCSEEEECSCC----C--HH-HHHHHHHHSCTTCEEEEEECSHH---------------HHHHHHHHHHHHCS
T ss_pred ccCCCCCEEEECCcc----c--HH-HHHHHHHhcCCCcEEEEEecCcc---------------cHHHHHHHHHhCCC
Confidence 233579999987633 2 44 99999999999999999765321 33455666776664
No 217
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=7.6e-15 Score=128.92 Aligned_cols=134 Identities=16% Similarity=0.173 Sum_probs=111.2
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPE 347 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~ 347 (485)
......+++.+...++.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.|++++...+ .++++..+|+.+ ++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~ 98 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDK 98 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccC
Confidence 35566777888888889999999999999999998 47799999999999999999876443 479999999887 6666
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEE
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDI 427 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 427 (485)
++||+|++..+ .+...+++++.++ |||.+++..... .....+.+.++++||.+.
T Consensus 99 ~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~--------------------~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 99 LEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL--------------------ENAAKIINEFESRGYNVD 152 (183)
T ss_dssp CCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH--------------------HHHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc--------------------ccHHHHHHHHHHcCCeEE
Confidence 79999999987 6789999999999 999999986421 124568899999999776
Q ss_pred EEe
Q 043471 428 IAE 430 (485)
Q Consensus 428 ~~~ 430 (485)
.++
T Consensus 153 ~~~ 155 (183)
T 2yxd_A 153 AVN 155 (183)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 218
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.61 E-value=1e-15 Score=134.08 Aligned_cols=114 Identities=16% Similarity=0.183 Sum_probs=93.1
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCC--C-CeEEEEeeccCCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHF--E-NVKFMCADVTSPDL 114 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~--~-~~~~~~~d~~~~~~ 114 (485)
.+.+..+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.... + ++ ++.+|+.. .+
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-~~ 88 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-AF 88 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-GG
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-hh
Confidence 355677788888888899999999999999999988 679999999999999999875332 3 68 88888754 24
Q ss_pred CCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 115 TFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 115 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+..+++||+|+++.+++| ..+++++.++|+|||.+++....
T Consensus 89 ~~~~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GGCCSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred hccCCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 333389999999998887 36999999999999999997654
No 219
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.61 E-value=2.5e-15 Score=139.42 Aligned_cols=132 Identities=23% Similarity=0.293 Sum_probs=105.8
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEE
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVI 353 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i 353 (485)
..+... +.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++....+..+++..+|+.+. +++++||+|
T Consensus 112 ~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~V 188 (254)
T 2nxc_A 112 KALARH-LRPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLL 188 (254)
T ss_dssp HHHHHH-CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEE
T ss_pred HHHHHh-cCCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEE
Confidence 334433 567889999999999999998886 66999999999999999998764443388888887662 446789999
Q ss_pred EEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 354 YSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 354 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
+++...++ ...+++++.++|||||+++++.... ...+.+.+.++++||+++....
T Consensus 189 v~n~~~~~---~~~~l~~~~~~LkpgG~lils~~~~--------------------~~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 189 VANLYAEL---HAALAPRYREALVPGGRALLTGILK--------------------DRAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp EEECCHHH---HHHHHHHHHHHEEEEEEEEEEEEEG--------------------GGHHHHHHHHHHTTCEEEEEEE
T ss_pred EECCcHHH---HHHHHHHHHHHcCCCCEEEEEeecc--------------------CCHHHHHHHHHHCCCEEEEEec
Confidence 99765543 5788999999999999999985432 1357899999999999987754
No 220
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.61 E-value=2.4e-15 Score=137.62 Aligned_cols=115 Identities=21% Similarity=0.233 Sum_probs=97.9
Q ss_pred ccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCC
Q 043471 37 DLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTF 116 (485)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~ 116 (485)
...+.....+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++....++++++++|+.+. + .
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~-~-~ 130 (231)
T 1vbf_A 53 TTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG-Y-E 130 (231)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC-C-G
T ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccc-c-c
Confidence 3445566778888888889999999999999999999999999999999999999999876545899999999762 2 2
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
.+++||+|++..+++|+.+ ++.++|+|||.+++....
T Consensus 131 ~~~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 131 EEKPYDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GGCCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred cCCCccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEcC
Confidence 4678999999999999874 488899999999997653
No 221
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.61 E-value=4.6e-15 Score=139.57 Aligned_cols=137 Identities=20% Similarity=0.268 Sum_probs=108.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~ 347 (485)
..+..+++.+. .++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|+++....+ .++++.++|+.+. +++
T Consensus 97 ~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~ 174 (276)
T 2b3t_A 97 CLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAG 174 (276)
T ss_dssp HHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTT
T ss_pred HHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-ccc
Confidence 45566667665 667899999999999999999765 5799999999999999999876333 2699999998763 446
Q ss_pred CCccEEEEccc-------------ccccC------------CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHH
Q 043471 348 NSFDVIYSRDT-------------ILHIQ------------DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYI 402 (485)
Q Consensus 348 ~~fD~i~~~~~-------------~~~~~------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 402 (485)
++||+|+++.. ++|.+ +...+++++.++|||||++++..
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~---------------- 238 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH---------------- 238 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC----------------
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE----------------
Confidence 78999999843 33332 34678999999999999999872
Q ss_pred HhcCCCCCCHHHHHHHHHhCCCeEEEE
Q 043471 403 KQRGYDLHDVKSYGQMLKDAGFVDIIA 429 (485)
Q Consensus 403 ~~~~~~~~~~~~~~~~l~~aGf~~~~~ 429 (485)
.....+.+.++++++||+.+.+
T Consensus 239 -----~~~~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 239 -----GWQQGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp -----CSSCHHHHHHHHHHTTCTTCCE
T ss_pred -----CchHHHHHHHHHHHCCCcEEEE
Confidence 1234678999999999986654
No 222
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.61 E-value=3.3e-15 Score=146.01 Aligned_cols=149 Identities=17% Similarity=0.189 Sum_probs=115.9
Q ss_pred HHHHHc--CCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCc
Q 043471 274 EFVAKL--DLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSF 350 (485)
Q Consensus 274 ~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~f 350 (485)
.+++.+ .+.++.+|||||||+|.++..+++++ +.+++++|+ +.+++.|++ . .+++++.+|+.+ +++ +|
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-~~v~~~~~d~~~-~~~--~~ 252 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----N-ENLNFVGGDMFK-SIP--SA 252 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----C-SSEEEEECCTTT-CCC--CC
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----C-CCcEEEeCccCC-CCC--Cc
Confidence 455555 34566799999999999999999987 679999999 788877654 2 359999999987 665 49
Q ss_pred cEEEEcccccccCCHH--HHHHHHHhcCCC---CcEEEEEecccCCCCCCh---hHHH---H--HHhcCCCCCCHHHHHH
Q 043471 351 DVIYSRDTILHIQDKP--ALFKSFFKWLKP---GGTVLISDYCKSFGTPSV---EFSE---Y--IKQRGYDLHDVKSYGQ 417 (485)
Q Consensus 351 D~i~~~~~~~~~~~~~--~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~---~~~~---~--~~~~~~~~~~~~~~~~ 417 (485)
|+|++..++||+++.. .+|++++++|+| ||++++.+.......... .... . ....+...++.++|.+
T Consensus 253 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ 332 (358)
T 1zg3_A 253 DAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEK 332 (358)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHH
T ss_pred eEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHH
Confidence 9999999999998876 999999999999 999999987655433221 1111 1 1112335678999999
Q ss_pred HHHhCCCeEEEEee
Q 043471 418 MLKDAGFVDIIAED 431 (485)
Q Consensus 418 ~l~~aGf~~~~~~~ 431 (485)
+|+++||+++++..
T Consensus 333 ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 333 LIYDAGFSSYKITP 346 (358)
T ss_dssp HHHHTTCCEEEEEE
T ss_pred HHHHcCCCeeEEEe
Confidence 99999999988765
No 223
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.60 E-value=4e-16 Score=151.04 Aligned_cols=143 Identities=27% Similarity=0.383 Sum_probs=102.0
Q ss_pred HHHHHHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChH
Q 043471 9 EREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDS 87 (485)
Q Consensus 9 ~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~ 87 (485)
.++.+..|++.|+....|.+|+.|..+.. .+++.|.+.....+|++|||||||+|.+++.+|+.|+ +|+|||.|+
T Consensus 41 ~~~~d~~Yf~sY~~~~iH~~ML~D~~Rt~---aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~- 116 (376)
T 4hc4_A 41 KRERDQLYYECYSDVSVHEEMIADRVRTD---AYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA- 116 (376)
T ss_dssp --------CCCHHHHHHHHHHHHCHHHHH---HHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-
T ss_pred cccchhhhhhhccCcHHHHHHhCCHHHHH---HHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-
Confidence 34556778888777777888988744322 3445555544456788999999999999999999886 799999996
Q ss_pred HHHHHHHHc---CCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccC-hHHHHHHHHHHHhhcccCcEEEEE
Q 043471 88 VIKKNEEVN---GHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLS-DKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 88 ~~~~a~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
+++.|++.. +...+|+++.++++++++| ++||+|+|.++-+.+- ......++....|+|+|||.++.+
T Consensus 117 ~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp---e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 117 IWQQAREVVRFNGLEDRVHVLPGPVETVELP---EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp THHHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred HHHHHHHHHHHcCCCceEEEEeeeeeeecCC---ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 788887753 3345799999999996543 6899999955433322 122778999999999999998764
No 224
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.60 E-value=1.1e-15 Score=148.43 Aligned_cols=140 Identities=17% Similarity=0.191 Sum_probs=108.1
Q ss_pred HHHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHH
Q 043471 13 QKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKK 91 (485)
Q Consensus 13 ~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~ 91 (485)
...||+.+.....+..++.|... .....+.+++.+...++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.
T Consensus 12 ~~~y~~~y~~~~~~~~ml~d~~r---~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~ 87 (348)
T 2y1w_A 12 AVQYFQFYGYLSQQQNMMQDYVR---TGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQH 87 (348)
T ss_dssp HHHHHHHHTCHHHHHHHHTCHHH---HHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHH
T ss_pred HHHHHHHHhhhhHHHHHhcchHH---HHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHH
Confidence 45677766555555666554221 223456777777777889999999999999999999865 999999996 8888
Q ss_pred HHHHcC---CCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 92 NEEVNG---HFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 92 a~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
|+++.. ..++++++.+|+.+.+ ++ ++||+|++..+++|+..+.....+.++.++|+|||.+++..
T Consensus 88 a~~~~~~~~l~~~v~~~~~d~~~~~--~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 88 AEVLVKSNNLTDRIVVIPGKVEEVS--LP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp HHHHHHHTTCTTTEEEEESCTTTCC--CS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred HHHHHHHcCCCCcEEEEEcchhhCC--CC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 887642 2258999999998844 33 68999999988888876556788889999999999998753
No 225
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.60 E-value=5.1e-15 Score=133.36 Aligned_cols=113 Identities=20% Similarity=0.213 Sum_probs=98.5
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPE 347 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~ 347 (485)
......+++.+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++...+ .++++..+|+.+.+.++
T Consensus 63 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 63 PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 356677888888899999999999999999999988 7899999999999999999886433 37999999998876667
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
++||+|++..+++|+++ ++.++|||||++++....
T Consensus 142 ~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 89999999999999875 688999999999998654
No 226
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.60 E-value=3.3e-15 Score=144.59 Aligned_cols=147 Identities=10% Similarity=0.023 Sum_probs=113.3
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCCC
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~~ 119 (485)
.+++.++..++.+|||||||+|..+..+++. +.+++++|+ +.+++.|+++... .++++++.+|+.+ ++ +.
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~--p~- 234 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PL--PA- 234 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC--CC-
T ss_pred HHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CC--CC-
Confidence 4555566566789999999999999999987 458999999 9999999987432 2579999999973 23 33
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcc--cc----CCCCCCCCChhHHHHHhhhccee
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDS--KR----KHNPTHYREPRFYSKVFKECQIQ 193 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~ 193 (485)
+||+|++..++||++++...+++++++++|+|||++++.+......... .+ .......++.+.|..+++++||.
T Consensus 235 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 314 (332)
T 3i53_A 235 GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLA 314 (332)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEE
T ss_pred CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCE
Confidence 8999999999999999878899999999999999999988765433000 00 00112234788999999999996
Q ss_pred cCC
Q 043471 194 DAS 196 (485)
Q Consensus 194 ~~~ 196 (485)
...
T Consensus 315 ~~~ 317 (332)
T 3i53_A 315 VRA 317 (332)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 227
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.60 E-value=1e-15 Score=138.88 Aligned_cols=145 Identities=15% Similarity=0.147 Sum_probs=98.3
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHH----H--cCCCCCeEEEEeeccCCCCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEE----V--NGHFENVKFMCADVTSPDLT 115 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~----~--~~~~~~~~~~~~d~~~~~~~ 115 (485)
...++.+...++.+|||||||+|.++..|++. +.+|+|+|+|++|++.+.+ + ....++++++++|+.+ ++
T Consensus 17 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~--l~ 94 (218)
T 3mq2_A 17 DAEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER--LP 94 (218)
T ss_dssp HHHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT--CC
T ss_pred HHHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh--CC
Confidence 34555556677889999999999999999998 6799999999998885322 1 1223589999999998 55
Q ss_pred CCCCCeeEEE---hhhhhh--ccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCC----hhHHHHH
Q 043471 116 FSEDSVDMMF---SNWLLM--YLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYRE----PRFYSKV 186 (485)
Q Consensus 116 ~~~~~~D~v~---~~~~~~--~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 186 (485)
+++++ |.|+ +...++ |+++ ...+++++.++|||||.++++............... ..... .+.+...
T Consensus 95 ~~~~~-d~v~~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 170 (218)
T 3mq2_A 95 PLSGV-GELHVLMPWGSLLRGVLGS--SPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGE-HPEPTPDSADEWLAPR 170 (218)
T ss_dssp SCCCE-EEEEEESCCHHHHHHHHTS--SSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTT-CCCCCHHHHHHHHHHH
T ss_pred CCCCC-CEEEEEccchhhhhhhhcc--HHHHHHHHHHHcCCCcEEEEEecccccccccccccc-CCccchHHHHHHHHHH
Confidence 56555 6555 333333 6666 358999999999999999996432211111111111 11112 2346678
Q ss_pred hhhcceec
Q 043471 187 FKECQIQD 194 (485)
Q Consensus 187 ~~~~~~~~ 194 (485)
+.++||..
T Consensus 171 l~~aGf~i 178 (218)
T 3mq2_A 171 YAEAGWKL 178 (218)
T ss_dssp HHHTTEEE
T ss_pred HHHcCCCc
Confidence 88889843
No 228
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.60 E-value=8e-16 Score=149.43 Aligned_cols=139 Identities=19% Similarity=0.280 Sum_probs=96.4
Q ss_pred HHHhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHH
Q 043471 14 KNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKN 92 (485)
Q Consensus 14 ~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a 92 (485)
..||+.+.....+.+++.+.... ...++.+.+.....++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|
T Consensus 29 ~~yf~~y~~~~~~~~~l~d~~r~---~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a 104 (349)
T 3q7e_A 29 DYYFDSYAHFGIHEELLKDEVRT---LTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYA 104 (349)
T ss_dssp --------CCHHHHHHHHCHHHH---HHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHH
T ss_pred HHHHHhhhhhHHHHHHhccHHHH---HHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHH
Confidence 45666655544455554442211 22334444444456788999999999999999999976 999999995 99999
Q ss_pred HHHcC---CCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccC-hHHHHHHHHHHHhhcccCcEEEEE
Q 043471 93 EEVNG---HFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLS-DKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 93 ~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
+++.. ..++++++++|+.+ +++++++||+|++..+.+++. ......+++++.++|||||+++..
T Consensus 105 ~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 105 VKIVKANKLDHVVTIIKGKVEE--VELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp HHHHHHTTCTTTEEEEESCTTT--CCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred HHHHHHcCCCCcEEEEECcHHH--ccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 88653 22359999999998 456788999999976544441 122678999999999999998753
No 229
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.60 E-value=2.2e-15 Score=134.28 Aligned_cols=112 Identities=19% Similarity=0.270 Sum_probs=91.8
Q ss_pred HcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCC--CCCeEEEEccCCCCC-CCCCCccE
Q 043471 278 KLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGL--KCSVEFEVADCTKKT-YPENSFDV 352 (485)
Q Consensus 278 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~--~~~i~~~~~d~~~~~-~~~~~fD~ 352 (485)
...++++.+|||+|||+|.++..+++.+ +.+++|+|+|+.+++.|++++... ..+++++++|+.+++ +.+++||+
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceE
Confidence 3356788999999999999999999885 369999999999999999997643 347999999988775 55689999
Q ss_pred EEEcccccc---------cCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 353 IYSRDTILH---------IQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 353 i~~~~~~~~---------~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
|++...+.. ..+...+++++.++|||||++++..+..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 999875511 1134679999999999999999987654
No 230
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.60 E-value=5.2e-15 Score=131.02 Aligned_cols=134 Identities=19% Similarity=0.230 Sum_probs=108.5
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKTYP 346 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~~~ 346 (485)
......+++.+...++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.+++++...+ .++++..+|+.+ +++
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~ 96 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALC 96 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcc
Confidence 3455667777888899999999999999999999885 899999999999999999875333 478999998866 233
Q ss_pred C-CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCe
Q 043471 347 E-NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFV 425 (485)
Q Consensus 347 ~-~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 425 (485)
. ++||+|++..+++ +...+++++.++|+|||.+++..... .+...+.+.+++.||.
T Consensus 97 ~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~--------------------~~~~~~~~~l~~~g~~ 153 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAILL--------------------ETKFEAMECLRDLGFD 153 (192)
T ss_dssp TSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECBH--------------------HHHHHHHHHHHHTTCC
T ss_pred cCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecCc--------------------chHHHHHHHHHHCCCc
Confidence 3 5899999987765 46899999999999999999985421 1245678899999995
Q ss_pred EE
Q 043471 426 DI 427 (485)
Q Consensus 426 ~~ 427 (485)
+.
T Consensus 154 ~~ 155 (192)
T 1l3i_A 154 VN 155 (192)
T ss_dssp CE
T ss_pred eE
Confidence 43
No 231
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.60 E-value=5.7e-15 Score=137.55 Aligned_cols=137 Identities=18% Similarity=0.198 Sum_probs=113.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCC--CCCeEEEEccCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGL--KCSVEFEVADCTKKTY 345 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~--~~~i~~~~~d~~~~~~ 345 (485)
..+..++..+.+.++.+|||+|||+|.++..+++.+ +.+++++|+++.+++.|++++... ..++++..+|+.+.++
T Consensus 83 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~ 162 (258)
T 2pwy_A 83 KDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAEL 162 (258)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCC
T ss_pred hHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC
Confidence 345677888888999999999999999999999884 579999999999999999987532 3579999999998877
Q ss_pred CCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCe
Q 043471 346 PENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFV 425 (485)
Q Consensus 346 ~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 425 (485)
++++||+|++ +.+++..+++++.++|+|||++++...... ....+.+.++++||.
T Consensus 163 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 163 EEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT--------------------QVLELVRAAEAHPFR 217 (258)
T ss_dssp CTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH--------------------HHHHHHHHHTTTTEE
T ss_pred CCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH--------------------HHHHHHHHHHHCCCc
Confidence 7789999998 457888999999999999999999864210 134667788889999
Q ss_pred EEEEee
Q 043471 426 DIIAED 431 (485)
Q Consensus 426 ~~~~~~ 431 (485)
.++..+
T Consensus 218 ~~~~~~ 223 (258)
T 2pwy_A 218 LERVLE 223 (258)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 876654
No 232
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.60 E-value=4.7e-15 Score=133.76 Aligned_cols=128 Identities=16% Similarity=0.178 Sum_probs=100.0
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCC--CCCCCccEEEEcc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKT--YPENSFDVIYSRD 357 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~--~~~~~fD~i~~~~ 357 (485)
.++.+|||||||+|.++..+++.. +.+++|+|+|+.+++.|++++...+ .++.++++|+.+++ +++++||.|++..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 356799999999999999999876 6799999999999999999876433 47999999998865 6678999998865
Q ss_pred cccccCC--------HHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEE
Q 043471 358 TILHIQD--------KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIA 429 (485)
Q Consensus 358 ~~~~~~~--------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 429 (485)
...+... ...+++++.++|||||.+++..... . ....+.+.++++||.....
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~----------~----------~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR----------G----------LFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH----------H----------HHHHHHHHHHHHTCEEEEE
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH----------H----------HHHHHHHHHHHCCCccccc
Confidence 4433221 3689999999999999999984211 0 0234567778889987654
No 233
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.60 E-value=3.8e-15 Score=137.37 Aligned_cols=114 Identities=25% Similarity=0.356 Sum_probs=94.2
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC-CCeEEEEeeccCCCCCCCCC
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF-ENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~~ 119 (485)
...+.+++.++. +.+|||||||+|.++..+++. .+|+|+|+|+.+++.|+++.... .+++++++|+.+. +++ +
T Consensus 22 ~~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~-~ 95 (243)
T 3d2l_A 22 EWVAWVLEQVEP--GKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMREL--ELP-E 95 (243)
T ss_dssp HHHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGC--CCS-S
T ss_pred HHHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhc--CCC-C
Confidence 344556666543 589999999999999999988 89999999999999999875322 4799999999884 444 7
Q ss_pred CeeEEEhhh-hhhccC-hHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 120 SVDMMFSNW-LLMYLS-DKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 120 ~~D~v~~~~-~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+||+|++.. +++|+. ......+++++.++|+|||.+++..+
T Consensus 96 ~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 96 PVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 899999986 899984 44578999999999999999998654
No 234
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.59 E-value=4e-15 Score=145.20 Aligned_cols=150 Identities=14% Similarity=0.252 Sum_probs=116.9
Q ss_pred HHhccCCCCC-CCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCC
Q 043471 45 EVLSLLPPYE-GKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 45 ~~~~~~~~~~-~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~ 118 (485)
.+++.++..+ +.+|||||||+|.++..++++ +.+++++|+ +.+++.++++... .++++++.+|+.+.+ ++..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~ 246 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR-NFEG 246 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG-GGTT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc-ccCC
Confidence 5666776666 889999999999999999987 568999999 8899998886432 236999999998732 1134
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc--c---------CCCCCCCCChhHHHHHh
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK--R---------KHNPTHYREPRFYSKVF 187 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~ 187 (485)
+.||+|++..++||++++....++++++++|+|||.+++.+.......... . .......++.+.|..++
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll 326 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVV 326 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHH
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHH
Confidence 679999999999999987788999999999999999999887654432111 0 01122345788999999
Q ss_pred hhcceecCC
Q 043471 188 KECQIQDAS 196 (485)
Q Consensus 188 ~~~~~~~~~ 196 (485)
+++||....
T Consensus 327 ~~aGf~~~~ 335 (352)
T 3mcz_A 327 RDAGLAVGE 335 (352)
T ss_dssp HHTTCEEEE
T ss_pred HHCCCceee
Confidence 999997654
No 235
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.59 E-value=3.5e-15 Score=132.35 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=98.3
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC--CCC--eEEEEeeccCCCCCC
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH--FEN--VKFMCADVTSPDLTF 116 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~--~~~--~~~~~~d~~~~~~~~ 116 (485)
...+.+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++... .++ ++++.+|+.+. +
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---~ 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN---V 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT---C
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc---c
Confidence 4667788888888889999999999999999999988999999999999999987532 234 99999998763 2
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++++||+|+++..+++. ......+++++.++|+|||.+++..+.
T Consensus 116 ~~~~~D~v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 116 KDRKYNKIITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp TTSCEEEEEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ccCCceEEEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 46789999998776653 333779999999999999999998664
No 236
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.59 E-value=8.8e-15 Score=143.48 Aligned_cols=149 Identities=11% Similarity=0.160 Sum_probs=116.8
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~ 117 (485)
...+++.++..++.+|||||||+|.++..++++ +.+++++|+ +.+++.|+++... .++++++.+|+.+ ++ +
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~--p 266 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TI--P 266 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CC--C
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CC--C
Confidence 345667777777889999999999999999988 558999999 9999999987532 3589999999973 23 3
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc--------CCCCCCCCChhHHHHHhhh
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR--------KHNPTHYREPRFYSKVFKE 189 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 189 (485)
. .||+|++..++|+++++...+++++++++|+|||++++.+........... .......++.+.|..++++
T Consensus 267 ~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~ 345 (369)
T 3gwz_A 267 D-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEK 345 (369)
T ss_dssp S-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHT
T ss_pred C-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHH
Confidence 3 899999999999999977779999999999999999998876544321110 0011223478899999999
Q ss_pred cceecCC
Q 043471 190 CQIQDAS 196 (485)
Q Consensus 190 ~~~~~~~ 196 (485)
+||....
T Consensus 346 aGf~~~~ 352 (369)
T 3gwz_A 346 SGLRVER 352 (369)
T ss_dssp TTEEEEE
T ss_pred CCCeEEE
Confidence 9996543
No 237
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.59 E-value=6.9e-16 Score=148.36 Aligned_cols=118 Identities=15% Similarity=0.241 Sum_probs=95.0
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCc-EEEEeCChHHHHHHHHHc----------CC-CCCeEEEEe
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGH-VIALDFIDSVIKKNEEVN----------GH-FENVKFMCA 107 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~-v~giD~s~~~~~~a~~~~----------~~-~~~~~~~~~ 107 (485)
+....+++.+...++.+|||||||+|.+++.++.. +.. |+|||+|+.+++.|++.. +. .++++|+++
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 44567888888899999999999999999999876 664 999999999999887632 21 258999999
Q ss_pred eccCCCCCCCC--CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 108 DVTSPDLTFSE--DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 108 d~~~~~~~~~~--~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
|+.+ +++++ ..||+|+++..+ |.++ ....|.+++++|||||.|++.+....
T Consensus 240 D~~~--lp~~d~~~~aDVVf~Nn~~-F~pd--l~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 240 DFLS--EEWRERIANTSVIFVNNFA-FGPE--VDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp CTTS--HHHHHHHHTCSEEEECCTT-CCHH--HHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred cccC--CccccccCCccEEEEcccc-cCch--HHHHHHHHHHcCCCCcEEEEeecccC
Confidence 9988 44433 479999998654 4444 67889999999999999999766543
No 238
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.59 E-value=3.3e-15 Score=138.70 Aligned_cols=104 Identities=14% Similarity=0.170 Sum_probs=86.1
Q ss_pred ccCCCCCCCcEEEEcCCCCcch-HHHHhh-cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCCCCCeeE
Q 043471 48 SLLPPYEGKTVLEFGAGIGRFT-GELAKK-AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFSEDSVDM 123 (485)
Q Consensus 48 ~~~~~~~~~~vLDiGcG~G~~~-~~l~~~-~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~D~ 123 (485)
..+...++.+|||||||+|.++ ..+++. +++|+|+|+|++|++.|+++... ..+++++++|+.+ ++ +++||+
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~--l~--d~~FDv 191 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV--ID--GLEFDV 191 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG--GG--GCCCSE
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh--CC--CCCcCE
Confidence 4567788999999999999876 555653 88999999999999999987532 2689999999987 43 689999
Q ss_pred EEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 124 MFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 124 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
|++... .++ ..++++++.++|||||.+++...
T Consensus 192 V~~~a~---~~d--~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 192 LMVAAL---AEP--KRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEECTT---CSC--HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCC---ccC--HHHHHHHHHHHcCCCcEEEEEcC
Confidence 997654 455 66999999999999999999753
No 239
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.59 E-value=3.6e-15 Score=146.80 Aligned_cols=151 Identities=14% Similarity=0.126 Sum_probs=114.6
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCC
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLT 115 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~ 115 (485)
...+.+++.+...++.+|||||||+|.++..+++. +.+++++|+ +.+++.|+++... .++++++.+|+.+ ++
T Consensus 169 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~- 245 (374)
T 1qzz_A 169 LAYEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PL- 245 (374)
T ss_dssp TTTHHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC-
T ss_pred hHHHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cC-
Confidence 44566777777777899999999999999999988 468999999 9999999987532 2379999999875 23
Q ss_pred CCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEec--cCCCCCc-ccc--------CCCCCCCCChhHHH
Q 043471 116 FSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRES--CFHQSGD-SKR--------KHNPTHYREPRFYS 184 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~--~~~~~~~-~~~--------~~~~~~~~~~~~~~ 184 (485)
+. .||+|++..++||++++....+++++.++|+|||++++.+. ....... ... ........+.+.|.
T Consensus 246 -~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (374)
T 1qzz_A 246 -PV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVV 323 (374)
T ss_dssp -SC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHH
T ss_pred -CC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHH
Confidence 33 49999999999999987677999999999999999999887 4322110 000 00012334788999
Q ss_pred HHhhhcceecCC
Q 043471 185 KVFKECQIQDAS 196 (485)
Q Consensus 185 ~~~~~~~~~~~~ 196 (485)
.+++++||....
T Consensus 324 ~ll~~aGf~~~~ 335 (374)
T 1qzz_A 324 DLAGSAGLALAS 335 (374)
T ss_dssp HHHHTTTEEEEE
T ss_pred HHHHHCCCceEE
Confidence 999999996533
No 240
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.59 E-value=5.3e-15 Score=132.91 Aligned_cols=112 Identities=16% Similarity=0.165 Sum_probs=91.2
Q ss_pred HHHHHHHHHcCCC---CCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCC
Q 043471 270 ETTKEFVAKLDLK---PGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKT 344 (485)
Q Consensus 270 ~~~~~~~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~ 344 (485)
.....+++.+... ++.+|||+|||+|.++..++... +.+++|+|+|+.+++.|++++...+ .++++..+|+.+.+
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 128 (207)
T 1jsx_A 49 MLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128 (207)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC
T ss_pred HHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC
Confidence 3445555554322 47899999999999999999875 5799999999999999999876443 24999999998876
Q ss_pred CCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEe
Q 043471 345 YPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 345 ~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
+.++||+|++.. +.+...+++++.++|+|||++++..
T Consensus 129 -~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 129 -SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp -CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred -ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 457899999854 3578899999999999999999873
No 241
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.58 E-value=6.4e-15 Score=134.99 Aligned_cols=142 Identities=15% Similarity=0.149 Sum_probs=101.3
Q ss_pred HHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCC---CCCCCCCcc
Q 043471 277 AKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTK---KTYPENSFD 351 (485)
Q Consensus 277 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~---~~~~~~~fD 351 (485)
+.+.+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+.++.... .++++..+|+.+ +++.+++||
T Consensus 71 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 71 DQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp SCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred heecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEE
Confidence 34567889999999999999999999885 369999999999887777665433 479999999987 344567899
Q ss_pred EEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 352 VIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 352 ~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
+|++... .......+++++.++|||||++++............ ....+ ..+ .++|+++||+++....
T Consensus 150 ~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~-~~~~~---------~~~-~~~l~~~Gf~~~~~~~ 216 (233)
T 2ipx_A 150 VIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTAS-AEAVF---------ASE-VKKMQQENMKPQEQLT 216 (233)
T ss_dssp EEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSC-HHHHH---------HHH-HHTTGGGTEEEEEEEE
T ss_pred EEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCC-HHHHH---------HHH-HHHHHHCCCceEEEEe
Confidence 9999554 222234568899999999999999643211000000 01110 122 5888999999987554
Q ss_pred c
Q 043471 432 R 432 (485)
Q Consensus 432 ~ 432 (485)
.
T Consensus 217 ~ 217 (233)
T 2ipx_A 217 L 217 (233)
T ss_dssp C
T ss_pred c
Confidence 3
No 242
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.58 E-value=4.5e-15 Score=137.99 Aligned_cols=103 Identities=21% Similarity=0.284 Sum_probs=86.0
Q ss_pred CCCcEEEEcCCCCc----chHHHHhh------cCcEEEEeCChHHHHHHHHHcC--------------------C---C-
Q 043471 54 EGKTVLEFGAGIGR----FTGELAKK------AGHVIALDFIDSVIKKNEEVNG--------------------H---F- 99 (485)
Q Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~------~~~v~giD~s~~~~~~a~~~~~--------------------~---~- 99 (485)
++.+|+|+|||||. ++..|++. +.+|+|+|+|++|++.|++... . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 56667665 2589999999999999998631 0 0
Q ss_pred ---------CCeEEEEeeccCCCCCCC-CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 100 ---------ENVKFMCADVTSPDLTFS-EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 100 ---------~~~~~~~~d~~~~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
.++.|.++|+.+. +++ .++||+|+|.++++|++++...++++++++.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 2689999999873 333 57899999999999999877889999999999999999994
No 243
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.58 E-value=4e-14 Score=129.13 Aligned_cols=147 Identities=18% Similarity=0.162 Sum_probs=105.3
Q ss_pred HHHHHH---HHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCC
Q 043471 270 ETTKEF---VAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKT 344 (485)
Q Consensus 270 ~~~~~~---~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~ 344 (485)
.....+ ++.+.+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+++++... .++++..+|+.+..
T Consensus 57 ~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~ 135 (227)
T 1g8a_A 57 KLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPE 135 (227)
T ss_dssp HHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGG
T ss_pred hHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcc
Confidence 444555 334457788999999999999999999875 369999999999999999988655 58999999998731
Q ss_pred ---CCCCCccEEEEcccccccCCHH-HHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHH
Q 043471 345 ---YPENSFDVIYSRDTILHIQDKP-ALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLK 420 (485)
Q Consensus 345 ---~~~~~fD~i~~~~~~~~~~~~~-~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 420 (485)
...++||+|++... .++.. .+++++.++|||||++++. +.............+ ...++.++ +
T Consensus 136 ~~~~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~~~---------~~~~l~~l-~ 201 (227)
T 1g8a_A 136 EYRALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTKEPEQV---------FREVEREL-S 201 (227)
T ss_dssp GGTTTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTSCHHHH---------HHHHHHHH-H
T ss_pred hhhcccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCCChhhh---------hHHHHHHH-H
Confidence 12368999998654 23444 4499999999999999998 322111111111111 24566666 7
Q ss_pred hCCCeEEEEeec
Q 043471 421 DAGFVDIIAEDR 432 (485)
Q Consensus 421 ~aGf~~~~~~~~ 432 (485)
++ |+++.....
T Consensus 202 ~~-f~~~~~~~~ 212 (227)
T 1g8a_A 202 EY-FEVIERLNL 212 (227)
T ss_dssp TT-SEEEEEEEC
T ss_pred hh-ceeeeEecc
Confidence 77 999877654
No 244
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.58 E-value=4.6e-15 Score=133.35 Aligned_cols=105 Identities=21% Similarity=0.251 Sum_probs=79.6
Q ss_pred CCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCC--CCCCCCCeeEEE
Q 043471 50 LPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPD--LTFSEDSVDMMF 125 (485)
Q Consensus 50 ~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~D~v~ 125 (485)
+...++.+|||+|||+|..+..+++.. .+|+|+|+|+.|++.+.+......++.++++|+.... .++ .++||+|+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~-~~~fD~V~ 131 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGI-VEKVDLIY 131 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTT-CCCEEEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhccc-ccceeEEE
Confidence 456678899999999999999999874 6899999999877654443322258999999987631 123 37999999
Q ss_pred hhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 126 SNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
++. ..+ . ....++++++++|||||.+++..
T Consensus 132 ~~~-~~~-~--~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 132 QDI-AQK-N--QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ECC-CST-T--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eec-cCh-h--HHHHHHHHHHHHhCCCCEEEEEE
Confidence 973 221 2 24456999999999999999973
No 245
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.58 E-value=3.4e-14 Score=128.45 Aligned_cols=148 Identities=18% Similarity=0.157 Sum_probs=100.9
Q ss_pred HHHHHHHHHc---CCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCC
Q 043471 270 ETTKEFVAKL---DLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKT 344 (485)
Q Consensus 270 ~~~~~~~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~ 344 (485)
.....++..+ .++++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++...+..... .++.++.+|+....
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~ 138 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQ 138 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGG
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccch
Confidence 4455565555 48899999999999999999999875 359999999999875544333222 38999999987632
Q ss_pred ---CCCCCccEEEEcccccccCCHHHHH-HHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHH
Q 043471 345 ---YPENSFDVIYSRDTILHIQDKPALF-KSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLK 420 (485)
Q Consensus 345 ---~~~~~fD~i~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 420 (485)
...++||+|++..+. ++....+ ..+.++|||||+++++......... .. +........+.|+
T Consensus 139 ~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t-------~~----~~e~~~~~~~~L~ 204 (232)
T 3id6_C 139 SYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVT-------KD----PKEIYKTEVEKLE 204 (232)
T ss_dssp GTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC--------------CC----SSSSTTHHHHHHH
T ss_pred hhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccC-------CC----HHHHHHHHHHHHH
Confidence 124689999997543 5666555 5566699999999998432210000 00 0011245667888
Q ss_pred hCCCeEEEEeec
Q 043471 421 DAGFVDIIAEDR 432 (485)
Q Consensus 421 ~aGf~~~~~~~~ 432 (485)
++||++++....
T Consensus 205 ~~gf~~~~~~~l 216 (232)
T 3id6_C 205 NSNFETIQIINL 216 (232)
T ss_dssp HTTEEEEEEEEC
T ss_pred HCCCEEEEEecc
Confidence 999999887654
No 246
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=5.5e-16 Score=140.09 Aligned_cols=140 Identities=18% Similarity=0.175 Sum_probs=90.5
Q ss_pred HHHHHHHHHcCC-CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDL-KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~ 347 (485)
..+..+++.+.. .++.+|||+|||+|.++..+++.. +.+++|+|+|+.+++.|++++...+.++++.++|+.+ ++++
T Consensus 16 ~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~ 94 (215)
T 4dzr_A 16 VLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIE 94 (215)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHH
T ss_pred HHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhh
Confidence 345566666654 678899999999999999999986 5699999999999999999876544478888888877 5554
Q ss_pred -----CCccEEEEcccccccCCH--------------------------HHHHHHHHhcCCCCcEEEEEecccCCCCCCh
Q 043471 348 -----NSFDVIYSRDTILHIQDK--------------------------PALFKSFFKWLKPGGTVLISDYCKSFGTPSV 396 (485)
Q Consensus 348 -----~~fD~i~~~~~~~~~~~~--------------------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~ 396 (485)
++||+|+++..+++..+. ..+++++.++|||||++++....
T Consensus 95 ~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-------- 166 (215)
T 4dzr_A 95 RAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG-------- 166 (215)
T ss_dssp HHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT--------
T ss_pred hhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC--------
Confidence 899999997665433221 77889999999999994444321
Q ss_pred hHHHHHHhcCCCCCCHHHHHHHHH--hCCCeEEEEe
Q 043471 397 EFSEYIKQRGYDLHDVKSYGQMLK--DAGFVDIIAE 430 (485)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~l~--~aGf~~~~~~ 430 (485)
....+.+.++++ ++||..+.+.
T Consensus 167 ------------~~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 167 ------------HNQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp ------------TSCHHHHHHHTGGGGGGTEECCEE
T ss_pred ------------CccHHHHHHHHHHhhcCCceEEEE
Confidence 123567788888 8899776543
No 247
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.58 E-value=1.5e-14 Score=132.41 Aligned_cols=113 Identities=23% Similarity=0.295 Sum_probs=97.5
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~ 348 (485)
......+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ ++++..+|+.+...+++
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~ 133 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEEEK 133 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccccCC
Confidence 356677888888889999999999999999999988 4799999999999999999987665 89999999987333467
Q ss_pred CccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 349 SFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
+||+|++..+++|+. .++.++|||||++++.....
T Consensus 134 ~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 134 PYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 899999999999986 47899999999999986543
No 248
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.58 E-value=3.4e-15 Score=144.61 Aligned_cols=148 Identities=14% Similarity=0.145 Sum_probs=114.7
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCC
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTF 116 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~ 116 (485)
....+++.++..+ .+|||||||+|..+..++++ +.+++++|+ +.+++.|+++... .++++++.+|+.+ ++
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-- 230 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV-- 230 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC--
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC--
Confidence 3456666666555 89999999999999999987 568999999 9999999887432 2579999999876 33
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc-cC--------CCCCCCCChhHHHHHh
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK-RK--------HNPTHYREPRFYSKVF 187 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~ 187 (485)
+ ++||+|++..++||++++...+++++++++|+|||++++.+.......... .. ......++.+.|.+++
T Consensus 231 ~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll 309 (334)
T 2ip2_A 231 P-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLL 309 (334)
T ss_dssp C-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHH
T ss_pred C-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHH
Confidence 3 679999999999999987778999999999999999999987654321110 00 0012234788999999
Q ss_pred hhcceecC
Q 043471 188 KECQIQDA 195 (485)
Q Consensus 188 ~~~~~~~~ 195 (485)
+++||...
T Consensus 310 ~~aGf~~~ 317 (334)
T 2ip2_A 310 GRGGFAVE 317 (334)
T ss_dssp HHTTEEEE
T ss_pred HHCCCcee
Confidence 99999653
No 249
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.58 E-value=1.1e-14 Score=135.34 Aligned_cols=136 Identities=20% Similarity=0.336 Sum_probs=112.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTY 345 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~ 345 (485)
.....++..+.+.++.+|||+|||+|.++..+++.. +.+++++|+|+.+++.|++++. +...++++..+|+.+. +
T Consensus 80 ~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 158 (255)
T 3mb5_A 80 KDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-I 158 (255)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-C
T ss_pred hHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-c
Confidence 345577788888999999999999999999999884 5799999999999999999875 4444599999999864 6
Q ss_pred CCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCC--
Q 043471 346 PENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAG-- 423 (485)
Q Consensus 346 ~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-- 423 (485)
++++||+|++ +.+++..+++++.++|+|||++++..... .....+.+.++++|
T Consensus 159 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~--------------------~~~~~~~~~l~~~g~~ 213 (255)
T 3mb5_A 159 EEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCS--------------------NQVMRLHEKLREFKDY 213 (255)
T ss_dssp CCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSH--------------------HHHHHHHHHHHHTGGG
T ss_pred CCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCH--------------------HHHHHHHHHHHHcCCC
Confidence 6788999998 45788899999999999999999875321 12456788899999
Q ss_pred CeEEEEee
Q 043471 424 FVDIIAED 431 (485)
Q Consensus 424 f~~~~~~~ 431 (485)
|..+.+..
T Consensus 214 f~~~~~~e 221 (255)
T 3mb5_A 214 FMKPRTIN 221 (255)
T ss_dssp BSCCEEEC
T ss_pred ccccEEEE
Confidence 98776643
No 250
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.58 E-value=7.5e-15 Score=134.71 Aligned_cols=143 Identities=15% Similarity=0.189 Sum_probs=104.8
Q ss_pred CCEEEEECCCC--ChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCC----CC--CCCcc-
Q 043471 284 GQKVLDVGCGI--GGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKT----YP--ENSFD- 351 (485)
Q Consensus 284 ~~~vLDiGcG~--G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~----~~--~~~fD- 351 (485)
..+|||||||+ +..+..++++. +++|+++|.|+.|++.|++++.+.. .+++++++|+.+.+ .+ .+.||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 35899999997 44555555542 6799999999999999999987543 36999999998752 01 24455
Q ss_pred ----EEEEcccccccCC---HHHHHHHHHhcCCCCcEEEEEecccCCCCC-ChhHHHHHHhcC--CCCCCHHHHHHHHHh
Q 043471 352 ----VIYSRDTILHIQD---KPALFKSFFKWLKPGGTVLISDYCKSFGTP-SVEFSEYIKQRG--YDLHDVKSYGQMLKD 421 (485)
Q Consensus 352 ----~i~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 421 (485)
.|+++.+|||+++ +..+++++.+.|+|||+|++++........ ...........+ +.+.+.+++..+|.
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~- 237 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE- 237 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT-
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC-
Confidence 5889999999987 568999999999999999999876542111 112222222222 45679999999994
Q ss_pred CCCeEEE
Q 043471 422 AGFVDII 428 (485)
Q Consensus 422 aGf~~~~ 428 (485)
||+.++
T Consensus 238 -Glelve 243 (277)
T 3giw_A 238 -GLELVE 243 (277)
T ss_dssp -TSEECT
T ss_pred -CCcccC
Confidence 998653
No 251
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.57 E-value=6.4e-15 Score=138.12 Aligned_cols=97 Identities=28% Similarity=0.395 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTIL 360 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~ 360 (485)
.++.+|||+|||+|.++..+++.. +.+++|+|+|+.+++.|+++.. ++.+..+|+.++++++++||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~fD~v~~~~~~- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP----QVTFCVASSHRLPFSDTSMDAIIRIYAP- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTSCSBCTTCEEEEEEESCC-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC----CcEEEEcchhhCCCCCCceeEEEEeCCh-
Confidence 577899999999999999999886 6799999999999999998753 6889999999988888999999997653
Q ss_pred ccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 361 HIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 361 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
.+++++.++|||||++++.++..
T Consensus 159 ------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 34799999999999999987654
No 252
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.57 E-value=9.3e-15 Score=131.33 Aligned_cols=134 Identities=18% Similarity=0.128 Sum_probs=95.6
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC----CCCCCCccEE
Q 043471 279 LDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK----TYPENSFDVI 353 (485)
Q Consensus 279 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~----~~~~~~fD~i 353 (485)
+.++++.+|||+|||+|..+..+++.. +.+|+|+|+|+.|++.+.++.... .++.++.+|+... +++ ++||+|
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V 130 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLI 130 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEE
Confidence 456788999999999999999999876 369999999999876665554332 3788888888763 444 789999
Q ss_pred EEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHH----HHHHhCCCeEEEE
Q 043471 354 YSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYG----QMLKDAGFVDIIA 429 (485)
Q Consensus 354 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~aGf~~~~~ 429 (485)
++.. . +..+...++++++++|||||++++...... ... ..+.+++. +.++++ |++++.
T Consensus 131 ~~~~-~-~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~--------------~~~-~~~~~~~~~~~~~~l~~~-f~~~~~ 192 (210)
T 1nt2_A 131 YQDI-A-QKNQIEILKANAEFFLKEKGEVVIMVKARS--------------IDS-TAEPEEVFKSVLKEMEGD-FKIVKH 192 (210)
T ss_dssp EECC-C-STTHHHHHHHHHHHHEEEEEEEEEEEEHHH--------------HCT-TSCHHHHHHHHHHHHHTT-SEEEEE
T ss_pred EEec-c-ChhHHHHHHHHHHHHhCCCCEEEEEEecCC--------------ccc-cCCHHHHHHHHHHHHHhh-cEEeee
Confidence 9972 2 212344568999999999999999832210 001 11233332 337888 999887
Q ss_pred eec
Q 043471 430 EDR 432 (485)
Q Consensus 430 ~~~ 432 (485)
...
T Consensus 193 ~~~ 195 (210)
T 1nt2_A 193 GSL 195 (210)
T ss_dssp EEC
T ss_pred ecC
Confidence 655
No 253
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=3.8e-14 Score=133.16 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=104.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCccEEEEccc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSFDVIYSRDT 358 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~ 358 (485)
++++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++. +...+++++++|+.+.+. +++||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 45788999999999999999998843379999999999999999876 444569999999998875 688999999543
Q ss_pred ccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 359 ILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 359 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
.+...+++++.++|||||++++.+....... .....+.+.+.++++||++..
T Consensus 202 ----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--------------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM--------------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--------------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc--------------cccHHHHHHHHHHHcCCeeEE
Confidence 3557889999999999999999876532111 122457788999999998866
No 254
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.57 E-value=1.1e-14 Score=142.69 Aligned_cols=143 Identities=17% Similarity=0.249 Sum_probs=111.3
Q ss_pred HHHhccCC-CCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCC
Q 043471 44 PEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDS 120 (485)
Q Consensus 44 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 120 (485)
..+++.++ ..++.+|||||||+|..+..++++ +.+++++|+ +.+++.|++. ++++++.+|+.+ ++ +.+
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~~--p~~- 262 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF----SGVEHLGGDMFD-GV--PKG- 262 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTT-CC--CCC-
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc----CCCEEEecCCCC-CC--CCC-
Confidence 45666665 556789999999999999999987 458999999 8888776643 689999999976 33 443
Q ss_pred eeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc--------------CCCCCCCCChhHHHHH
Q 043471 121 VDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR--------------KHNPTHYREPRFYSKV 186 (485)
Q Consensus 121 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 186 (485)
|+|++..++||++++...+++++++++|+|||.+++.+........... .......++.+.|.++
T Consensus 263 -D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~l 341 (368)
T 3reo_A 263 -DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQAL 341 (368)
T ss_dssp -SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHH
T ss_pred -CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHH
Confidence 9999999999999887889999999999999999998876543321100 0112233478889999
Q ss_pred hhhcceecCC
Q 043471 187 FKECQIQDAS 196 (485)
Q Consensus 187 ~~~~~~~~~~ 196 (485)
++++||....
T Consensus 342 l~~AGF~~v~ 351 (368)
T 3reo_A 342 AMASGFRGFK 351 (368)
T ss_dssp HHHTTCCEEE
T ss_pred HHHCCCeeeE
Confidence 9999996543
No 255
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.57 E-value=3.5e-15 Score=133.93 Aligned_cols=129 Identities=17% Similarity=0.185 Sum_probs=101.8
Q ss_pred hHHHhccCC--CCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCC
Q 043471 43 RPEVLSLLP--PYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 43 ~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~ 117 (485)
...+++.+. ..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++... ..+++++++|+.+. .
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~ 122 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD----V 122 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT----C
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc----C
Confidence 334444443 45678999999999999999998865 999999999999999987542 23599999998762 3
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceecC
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
+++||+|+++..++++ ..+++++.++|+|||++++.+.... ..+.+...++++||...
T Consensus 123 ~~~fD~i~~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~~~~---------------~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 123 DGKFDLIVANILAEIL-----LDLIPQLDSHLNEDGQVIFSGIDYL---------------QLPKIEQALAENSFQID 180 (205)
T ss_dssp CSCEEEEEEESCHHHH-----HHHGGGSGGGEEEEEEEEEEEEEGG---------------GHHHHHHHHHHTTEEEE
T ss_pred CCCceEEEECCcHHHH-----HHHHHHHHHhcCCCCEEEEEecCcc---------------cHHHHHHHHHHcCCceE
Confidence 5899999998776653 5789999999999999999755432 45678888999998543
No 256
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.57 E-value=4.6e-15 Score=134.11 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=86.0
Q ss_pred CCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCC-C--CCCCCccEEEEcc
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKK-T--YPENSFDVIYSRD 357 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~-~--~~~~~fD~i~~~~ 357 (485)
++.+|||||||+|.++..+++.. +..|+|+|+|+.+++.|++++...+ .++.++++|+.++ + +++++||.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56799999999999999999876 5799999999999999999876433 3799999998774 3 6789999999985
Q ss_pred cccccCCH--------HHHHHHHHhcCCCCcEEEEEe
Q 043471 358 TILHIQDK--------PALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 358 ~~~~~~~~--------~~~l~~~~~~LkpgG~l~i~~ 386 (485)
...+.... ..+++++.++|||||.+++.+
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 54433221 269999999999999999985
No 257
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.56 E-value=3.3e-15 Score=133.56 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=87.6
Q ss_pred CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC---CCeEEEEccCCCCC--CCCCC-ccEEEEc
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK---CSVEFEVADCTKKT--YPENS-FDVIYSR 356 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~---~~i~~~~~d~~~~~--~~~~~-fD~i~~~ 356 (485)
++.+|||+|||+|.++..++.+...+|+|+|+|+.|++.|++++...+ .+++++++|+.+.. +++++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 577999999999999998777644599999999999999999886444 47999999987643 23578 9999998
Q ss_pred ccccccCCHHHHHHHH--HhcCCCCcEEEEEeccc
Q 043471 357 DTILHIQDKPALFKSF--FKWLKPGGTVLISDYCK 389 (485)
Q Consensus 357 ~~~~~~~~~~~~l~~~--~~~LkpgG~l~i~~~~~ 389 (485)
..++ ..+...+++.+ .++|+|||.+++.....
T Consensus 133 ~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8754 66788899999 77899999999986544
No 258
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.56 E-value=2.2e-14 Score=131.14 Aligned_cols=109 Identities=21% Similarity=0.388 Sum_probs=88.4
Q ss_pred HHH---hccCCCCCCCcEEEEcCCCCcchHHHHhh-c-CcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCC--CCC
Q 043471 44 PEV---LSLLPPYEGKTVLEFGAGIGRFTGELAKK-A-GHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPD--LTF 116 (485)
Q Consensus 44 ~~~---~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--~~~ 116 (485)
..+ ++.+...++.+|||+|||+|.++..|++. + .+|+|+|+|+.+++.|+++....+++.++.+|+.... +++
T Consensus 61 ~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~ 140 (230)
T 1fbn_A 61 AAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANI 140 (230)
T ss_dssp HHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTT
T ss_pred HHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccccccc
Confidence 455 56666677889999999999999999988 4 6999999999999999988765578999999998621 223
Q ss_pred CCCCeeEEEhhhhhhccChH-HHHHHHHHHHhhcccCcEEEEE
Q 043471 117 SEDSVDMMFSNWLLMYLSDK-EVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
. ++||+|+ ++++++ ....+++++.++|+|||++++.
T Consensus 141 ~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 141 V-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp S-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 3 7899999 344432 2467899999999999999996
No 259
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.56 E-value=4.5e-15 Score=137.95 Aligned_cols=144 Identities=9% Similarity=0.059 Sum_probs=100.2
Q ss_pred CCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCC---CCC---CCCccEE
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKK---TYP---ENSFDVI 353 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~---~~~---~~~fD~i 353 (485)
++.+|||+|||+|.++..++++. +.+|+|+|+|+.|++.|++++.. +..+++++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 57799999999999999998875 67999999999999999998863 344699999997652 344 2689999
Q ss_pred EEcccccccC---------------CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCC------CCCCH
Q 043471 354 YSRDTILHIQ---------------DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGY------DLHDV 412 (485)
Q Consensus 354 ~~~~~~~~~~---------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 412 (485)
+++..+++.. ....++.+++++|||||.+.+.+... ........+.+. .....
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~------~~~~~~l~~~g~~~~~~~~~~~~ 218 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRII------HDSLQLKKRLRWYSCMLGKKCSL 218 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHH------HHHHHHGGGBSCEEEEESSTTSH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHH------HHHHhcccceEEEEECCCChhHH
Confidence 9987665443 12245788999999999987763211 001112222221 22345
Q ss_pred HHHHHHHHhCCCeEEEEeec
Q 043471 413 KSYGQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 413 ~~~~~~l~~aGf~~~~~~~~ 432 (485)
..+.++|+++||+.+.+...
T Consensus 219 ~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 219 APLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp HHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHcCCCceEEEEE
Confidence 78999999999998876543
No 260
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.56 E-value=1.2e-14 Score=142.17 Aligned_cols=151 Identities=15% Similarity=0.213 Sum_probs=115.8
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCC
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLT 115 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~ 115 (485)
...+.+++.++..++.+|||||||+|.++..+++.+ .+++++|+ +.+++.|+++... .++++++.+|+.+ ++
T Consensus 170 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~- 246 (360)
T 1tw3_A 170 VAFDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PL- 246 (360)
T ss_dssp TTTHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CC-
T ss_pred HhHHHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CC-
Confidence 344567777777778899999999999999999884 58999999 9999999987532 2379999999875 23
Q ss_pred CCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc-CCCCCc-ccc--------CCCCCCCCChhHHHH
Q 043471 116 FSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC-FHQSGD-SKR--------KHNPTHYREPRFYSK 185 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~-~~~~~~-~~~--------~~~~~~~~~~~~~~~ 185 (485)
+. .||+|++..++||++++...++++++.++|+|||.+++.+.. ...... ... .......++.+.|.+
T Consensus 247 -~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 324 (360)
T 1tw3_A 247 -PR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDG 324 (360)
T ss_dssp -SS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHH
T ss_pred -CC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHH
Confidence 33 499999999999999877789999999999999999998876 322110 000 000123347889999
Q ss_pred HhhhcceecCC
Q 043471 186 VFKECQIQDAS 196 (485)
Q Consensus 186 ~~~~~~~~~~~ 196 (485)
+++++||....
T Consensus 325 ll~~aGf~~~~ 335 (360)
T 1tw3_A 325 LAASAGLVVEE 335 (360)
T ss_dssp HHHHTTEEEEE
T ss_pred HHHHCCCeEEE
Confidence 99999996543
No 261
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.56 E-value=2.8e-14 Score=132.84 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=101.2
Q ss_pred HHHHHHHHcCCC-CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEE-EEccCCCCC---C
Q 043471 271 TTKEFVAKLDLK-PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEF-EVADCTKKT---Y 345 (485)
Q Consensus 271 ~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~-~~~d~~~~~---~ 345 (485)
.+..+++.+.+. ++.+|||+|||||.++..+++....+|+|+|+|+.|++.+.++.. ++.. ...++..++ +
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~----rv~~~~~~ni~~l~~~~l 147 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD----RVRSMEQYNFRYAEPVDF 147 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT----TEEEECSCCGGGCCGGGC
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc----ccceecccCceecchhhC
Confidence 566778888765 567999999999999999988733599999999999998644321 2222 223333322 3
Q ss_pred CCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCC------CCCCHHHHHHHH
Q 043471 346 PENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGY------DLHDVKSYGQML 419 (485)
Q Consensus 346 ~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l 419 (485)
+..+||+|++..++++ ...+|.+++|+|||||++++..-....... ... ...|. .....+++.+++
T Consensus 148 ~~~~fD~v~~d~sf~s---l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~-~~~----~~~G~vrd~~~~~~~~~~v~~~~ 219 (291)
T 3hp7_A 148 TEGLPSFASIDVSFIS---LNLILPALAKILVDGGQVVALVKPQFEAGR-EQI----GKNGIVRESSIHEKVLETVTAFA 219 (291)
T ss_dssp TTCCCSEEEECCSSSC---GGGTHHHHHHHSCTTCEEEEEECGGGTSCG-GGC----C-CCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEeeHhh---HHHHHHHHHHHcCcCCEEEEEECcccccCh-hhc----CCCCccCCHHHHHHHHHHHHHHH
Confidence 4456999999887764 488999999999999999987211111000 000 00010 112467899999
Q ss_pred HhCCCeEEEEee
Q 043471 420 KDAGFVDIIAED 431 (485)
Q Consensus 420 ~~aGf~~~~~~~ 431 (485)
+++||.+..+..
T Consensus 220 ~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 220 VDYGFSVKGLDF 231 (291)
T ss_dssp HHTTEEEEEEEE
T ss_pred HHCCCEEEEEEE
Confidence 999999877654
No 262
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.56 E-value=6.5e-15 Score=143.32 Aligned_cols=145 Identities=12% Similarity=0.129 Sum_probs=108.8
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~~ 117 (485)
...+++.++..++.+|||||||+|..+..++++. .+++++|++ .++. +++.. ..++++++.+|+.+ ++ +
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~--p 246 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR-EV--P 246 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT-CC--C
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC-CC--C
Confidence 3456777777778899999999999999999874 478999994 4444 22221 22479999999962 23 3
Q ss_pred CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc---------CCCCCCCCChhHHHHHhh
Q 043471 118 EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR---------KHNPTHYREPRFYSKVFK 188 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 188 (485)
+||+|++..++||++++...+++++++++|||||++++.+........... .......++.+.|.++++
T Consensus 247 --~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~ 324 (348)
T 3lst_A 247 --HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFT 324 (348)
T ss_dssp --CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHH
T ss_pred --CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHH
Confidence 899999999999999977789999999999999999998876543311100 011222347889999999
Q ss_pred hcceecC
Q 043471 189 ECQIQDA 195 (485)
Q Consensus 189 ~~~~~~~ 195 (485)
++||...
T Consensus 325 ~aGf~~~ 331 (348)
T 3lst_A 325 AAGLRLD 331 (348)
T ss_dssp HTTEEEE
T ss_pred HCCCceE
Confidence 9999653
No 263
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.56 E-value=1.2e-15 Score=130.79 Aligned_cols=104 Identities=15% Similarity=0.265 Sum_probs=85.3
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTIL 360 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~ 360 (485)
.+..+|||+|||+|.++..++... +++|+++|+|+.|++.+++++...+...++...|.... .+.++||+|++..++|
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHH
Confidence 556799999999999999997764 57999999999999999999875443323333666544 3468899999999999
Q ss_pred ccCCHHHHHHHHHhcCCCCcEEEEEe
Q 043471 361 HIQDKPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 361 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
++++.+..+.++.+.|+|||.++-..
T Consensus 127 lL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 99877888889999999999876554
No 264
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.56 E-value=1.2e-14 Score=132.83 Aligned_cols=136 Identities=15% Similarity=0.029 Sum_probs=99.4
Q ss_pred hHHHhccCCCCCCCcEEEEcCC-CCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCCCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAG-IGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 119 (485)
.+.++......++.+|||+||| +|.++..+++. +.+|+|+|+|+.+++.|+++....+ +++++++|+... .+++++
T Consensus 44 ~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 122 (230)
T 3evz_A 44 SRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGII-KGVVEG 122 (230)
T ss_dssp HHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSS-TTTCCS
T ss_pred hhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhh-hhcccC
Confidence 3444233334578899999999 99999999998 8899999999999999998754322 799999997543 234568
Q ss_pred CeeEEEhhhhhhccChH-----------------HHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhH
Q 043471 120 SVDMMFSNWLLMYLSDK-----------------EVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRF 182 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~-----------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
+||+|+++-.+++.++. ....+++++.++|+|||++++..+... ...+.
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------~~~~~ 188 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE--------------KLLNV 188 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH--------------HHHHH
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH--------------hHHHH
Confidence 99999998655443321 136899999999999999999643210 13456
Q ss_pred HHHHhhhccee
Q 043471 183 YSKVFKECQIQ 193 (485)
Q Consensus 183 ~~~~~~~~~~~ 193 (485)
+.+.+++.|+.
T Consensus 189 ~~~~l~~~g~~ 199 (230)
T 3evz_A 189 IKERGIKLGYS 199 (230)
T ss_dssp HHHHHHHTTCE
T ss_pred HHHHHHHcCCc
Confidence 67778887773
No 265
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.56 E-value=2.2e-15 Score=145.10 Aligned_cols=137 Identities=22% Similarity=0.361 Sum_probs=100.1
Q ss_pred HhhhcCcCcchhhhhcCCCcCccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHH
Q 043471 16 YWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEE 94 (485)
Q Consensus 16 yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~ 94 (485)
||+.+.....+..|+.|... ....++.+++.+...++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|++
T Consensus 3 Yf~~y~~~~~~~~ml~d~~r---~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~ 78 (328)
T 1g6q_1 3 YFDSYDHYGIHEEMLQDTVR---TLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKE 78 (328)
T ss_dssp CCCCCCCHHHHHHHHTCHHH---HHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHH
T ss_pred hhhhhcCchHHHHHhcCHHH---HHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHH
Confidence 56555544455556554322 123444555555556788999999999999999999875 89999999 59998888
Q ss_pred HcC---CCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhhccC-hHHHHHHHHHHHhhcccCcEEEEE
Q 043471 95 VNG---HFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLS-DKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 95 ~~~---~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
+.. ..++++++++|+.+ +++++++||+|++..+.+++. ......++.++.++|+|||.++..
T Consensus 79 ~~~~~~~~~~i~~~~~d~~~--~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 79 LVELNGFSDKITLLRGKLED--VHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp HHHHTTCTTTEEEEESCTTT--SCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred HHHHcCCCCCEEEEECchhh--ccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 643 22479999999988 455678999999986544432 222668999999999999999753
No 266
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.56 E-value=2.2e-14 Score=135.03 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=105.2
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCC-EEEEEeC-CHHHHHHHHHHh-----cCCC------CCeEEEEc
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDV-HVVGIDL-SINMISFALERA-----IGLK------CSVEFEVA 338 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~-s~~~~~~a~~~~-----~~~~------~~i~~~~~ 338 (485)
...+.+.....++.+|||+|||+|.++..+++. +. +|+|+|+ |+.+++.|++++ ...+ .++++...
T Consensus 68 ~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~ 146 (281)
T 3bzb_A 68 ADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPY 146 (281)
T ss_dssp HHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEEC
T ss_pred HHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEe
Confidence 334444444457789999999999999988886 55 9999999 899999999988 3222 36777766
Q ss_pred cCCCCC--C----CCCCccEEEEcccccccCCHHHHHHHHHhcCC---C--CcEEEEEecccCCCCCChhHHHHHHhcCC
Q 043471 339 DCTKKT--Y----PENSFDVIYSRDTILHIQDKPALFKSFFKWLK---P--GGTVLISDYCKSFGTPSVEFSEYIKQRGY 407 (485)
Q Consensus 339 d~~~~~--~----~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~Lk---p--gG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 407 (485)
|..+.. + ++++||+|++..+++|.++...+++.+.++|+ | ||++++........
T Consensus 147 ~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~--------------- 211 (281)
T 3bzb_A 147 RWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPH--------------- 211 (281)
T ss_dssp CTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-------------------
T ss_pred cCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc---------------
Confidence 654421 1 35789999999999999999999999999999 9 99987753221100
Q ss_pred CCCCHHHHHHHHHhCC-CeEEEEeec
Q 043471 408 DLHDVKSYGQMLKDAG-FVDIIAEDR 432 (485)
Q Consensus 408 ~~~~~~~~~~~l~~aG-f~~~~~~~~ 432 (485)
.......+.+.++++| |++..+...
T Consensus 212 ~~~~~~~~~~~l~~~G~f~v~~~~~~ 237 (281)
T 3bzb_A 212 LAERDLAFFRLVNADGALIAEPWLSP 237 (281)
T ss_dssp ----CTHHHHHHHHSTTEEEEEEECC
T ss_pred cchhHHHHHHHHHhcCCEEEEEeccc
Confidence 0011345667889999 998877543
No 267
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.55 E-value=2.1e-15 Score=134.84 Aligned_cols=118 Identities=16% Similarity=0.191 Sum_probs=90.2
Q ss_pred hhhHHHhccCCCC-CCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcC--CC--CCeEEEEeeccCCCC
Q 043471 41 EERPEVLSLLPPY-EGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNG--HF--ENVKFMCADVTSPDL 114 (485)
Q Consensus 41 ~~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~--~~--~~~~~~~~d~~~~~~ 114 (485)
..+..+++.+... ++.+|||+|||+|.++..++.++. +|+|+|+|+.|++.|+++.. .. ++++++++|+.+...
T Consensus 39 ~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~ 118 (201)
T 2ift_A 39 RVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK 118 (201)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH
Confidence 4444555555432 678999999999999998877764 89999999999999998753 22 489999999876322
Q ss_pred CCCCCC-eeEEEhhhhhhccChHHHHHHHHHH--HhhcccCcEEEEEecc
Q 043471 115 TFSEDS-VDMMFSNWLLMYLSDKEVEKLAERM--VKWLKVGGYIFFRESC 161 (485)
Q Consensus 115 ~~~~~~-~D~v~~~~~~~~~~~~~~~~~l~~~--~~~L~pgG~l~~~~~~ 161 (485)
..++++ ||+|+++..+ +... ...+++.+ .++|+|||.+++....
T Consensus 119 ~~~~~~~fD~I~~~~~~-~~~~--~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 119 QPQNQPHFDVVFLDPPF-HFNL--AEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp SCCSSCCEEEEEECCCS-SSCH--HHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred hhccCCCCCEEEECCCC-CCcc--HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 223578 9999998663 3444 66888888 6789999999997654
No 268
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.55 E-value=1.7e-14 Score=139.46 Aligned_cols=110 Identities=24% Similarity=0.277 Sum_probs=92.2
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCcc
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSFD 351 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~fD 351 (485)
.+.+.+...++.+|||||||+|.++..+++....+|+|+|+|+ |++.|++++. ++..+++++.+|+.++++++++||
T Consensus 55 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 133 (340)
T 2fyt_A 55 FIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVD 133 (340)
T ss_dssp HHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEE
T ss_pred HHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEE
Confidence 4444455677889999999999999999987334999999997 9999998875 344689999999999988888999
Q ss_pred EEEEcc---cccccCCHHHHHHHHHhcCCCCcEEEE
Q 043471 352 VIYSRD---TILHIQDKPALFKSFFKWLKPGGTVLI 384 (485)
Q Consensus 352 ~i~~~~---~~~~~~~~~~~l~~~~~~LkpgG~l~i 384 (485)
+|++.. .+.+..+...+++++.++|||||+++.
T Consensus 134 ~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 134 VIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 999976 455556788899999999999999873
No 269
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.55 E-value=9.4e-15 Score=134.82 Aligned_cols=130 Identities=13% Similarity=0.077 Sum_probs=102.7
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCC---CCCccEEEE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYP---ENSFDVIYS 355 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~---~~~fD~i~~ 355 (485)
..++.+|||||||+|..+..++... +.+|+++|+|+.+++.|++++..++ .+++++++|+.+.+.. .++||+|++
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 4567899999999999999999875 6799999999999999999886433 2599999999876542 478999999
Q ss_pred cccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeec
Q 043471 356 RDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAEDR 432 (485)
Q Consensus 356 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 432 (485)
.. +.+...+++.+.++|||||++++..... ... ....+.+.++..||++..+...
T Consensus 158 ~a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~----~~~--------------e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 158 RA----VAPLCVLSELLLPFLEVGGAAVAMKGPR----VEE--------------ELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp ES----SCCHHHHHHHHGGGEEEEEEEEEEECSC----CHH--------------HHTTHHHHHHHHTEEEEEEEEE
T ss_pred CC----cCCHHHHHHHHHHHcCCCeEEEEEeCCC----cHH--------------HHHHHHHHHHHcCCeEEEEEEe
Confidence 75 3578899999999999999998863211 000 1235667788889998877654
No 270
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.55 E-value=2e-14 Score=141.49 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=98.1
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC-CEEEEEeCCHHHHHHH-------HHHhcCCC---CCeEEEE
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD-VHVVGIDLSINMISFA-------LERAIGLK---CSVEFEV 337 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a-------~~~~~~~~---~~i~~~~ 337 (485)
...+..+++.+.+.++.+|||||||+|.++..+++..+ .+|+|+|+++.+++.| ++++...+ .++++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 46678888999999999999999999999999998765 4899999999999988 77765333 5899988
Q ss_pred ccCCCC--CC--CCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccC
Q 043471 338 ADCTKK--TY--PENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKS 390 (485)
Q Consensus 338 ~d~~~~--~~--~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 390 (485)
+|.... ++ ..++||+|+++.++ +.++...+|+++.++|||||++++.+....
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 765432 12 24789999998766 446888899999999999999999865443
No 271
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.55 E-value=1.8e-14 Score=140.76 Aligned_cols=143 Identities=15% Similarity=0.258 Sum_probs=111.1
Q ss_pred HHHhccCC-CCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCC
Q 043471 44 PEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDS 120 (485)
Q Consensus 44 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 120 (485)
..+++.++ ..++.+|||||||+|..+..++++ +.+++++|+ +.+++.|++. ++++++.+|+.+ ++ +.+
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~D~~~-~~--p~~- 260 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF----PGVTHVGGDMFK-EV--PSG- 260 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTT-CC--CCC-
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc----CCeEEEeCCcCC-CC--CCC-
Confidence 45666665 556789999999999999999987 458999999 8888776643 689999999976 34 443
Q ss_pred eeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccc---------c-----CCCCCCCCChhHHHHH
Q 043471 121 VDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSK---------R-----KHNPTHYREPRFYSKV 186 (485)
Q Consensus 121 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~ 186 (485)
|+|++..++|+++++...+++++++++|+|||++++.+.......... + .......++.+.|..+
T Consensus 261 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~l 339 (364)
T 3p9c_A 261 -DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQAL 339 (364)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHH
T ss_pred -CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHH
Confidence 999999999999988888999999999999999999887654322110 0 0112233467889999
Q ss_pred hhhcceecCC
Q 043471 187 FKECQIQDAS 196 (485)
Q Consensus 187 ~~~~~~~~~~ 196 (485)
++++||+...
T Consensus 340 l~~AGF~~v~ 349 (364)
T 3p9c_A 340 ARGAGFTGVK 349 (364)
T ss_dssp HHHTTCCEEE
T ss_pred HHHCCCceEE
Confidence 9999996543
No 272
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.55 E-value=3.2e-14 Score=133.92 Aligned_cols=135 Identities=19% Similarity=0.252 Sum_probs=110.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKTYP 346 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~~~ 346 (485)
....++..+.+.++.+|||+|||+|.++..+++.. +.+++++|+|+.+++.|++++...+ .++++..+|+.+. ++
T Consensus 100 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 178 (277)
T 1o54_A 100 DSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FD 178 (277)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CS
T ss_pred HHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-cc
Confidence 34567788888999999999999999999999884 5799999999999999999876433 4799999999876 56
Q ss_pred CCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeE
Q 043471 347 ENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVD 426 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 426 (485)
+++||+|++ +.+++..+++++.++|+|||++++..... .....+.+.|+++||..
T Consensus 179 ~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~--------------------~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 179 EKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTT--------------------NQVQETLKKLQELPFIR 233 (277)
T ss_dssp CCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSH--------------------HHHHHHHHHHHHSSEEE
T ss_pred CCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCH--------------------HHHHHHHHHHHHCCCce
Confidence 678999998 45678899999999999999999986321 01345677888899998
Q ss_pred EEEee
Q 043471 427 IIAED 431 (485)
Q Consensus 427 ~~~~~ 431 (485)
+....
T Consensus 234 ~~~~~ 238 (277)
T 1o54_A 234 IEVWE 238 (277)
T ss_dssp EEEEC
T ss_pred eEEEE
Confidence 76643
No 273
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.55 E-value=5.8e-15 Score=129.05 Aligned_cols=119 Identities=13% Similarity=0.201 Sum_probs=96.0
Q ss_pred ccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCC---CCCCeeEE
Q 043471 48 SLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTF---SEDSVDMM 124 (485)
Q Consensus 48 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~D~v 124 (485)
..++..+|.+|||||||. +++|+|+.|++.|+++.. .+++++++|+.+ +++ ++++||+|
T Consensus 6 ~~~g~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~--~~~~~~~~d~~~--~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 6 ADFGISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTG--NEGRVSVENIKQ--LLQSAHKESSFDII 67 (176)
T ss_dssp TTTTCCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTT--TTSEEEEEEGGG--GGGGCCCSSCEEEE
T ss_pred hccCCCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhcc--cCcEEEEechhc--CccccCCCCCEeEE
Confidence 345667899999999996 249999999999999875 369999999998 545 78899999
Q ss_pred Ehhhhhhcc-ChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcce
Q 043471 125 FSNWLLMYL-SDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQI 192 (485)
Q Consensus 125 ~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (485)
+|+.+++|+ ++ ...++++++|+|||||++++.++..... ....+..+.+.+...++++||
T Consensus 68 ~~~~~l~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~------~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 68 LSGLVPGSTTLH--SAEILAEIARILRPGGCLFLKEPVETAV------DNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EECCSTTCCCCC--CHHHHHHHHHHEEEEEEEEEEEEEESSS------CSSSSSCCHHHHHHHHHHTTC
T ss_pred EECChhhhcccC--HHHHHHHHHHHCCCCEEEEEEccccccc------ccccccCCHHHHHHHHHHCCC
Confidence 999999999 76 5699999999999999999976543211 112333467889999999998
No 274
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.54 E-value=7.4e-15 Score=132.47 Aligned_cols=107 Identities=21% Similarity=0.337 Sum_probs=85.0
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCCCCCCCeeEEEhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLTFSEDSVDMMFSNW 128 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~ 128 (485)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..++++++++|+..++..+++++||.|+++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 35779999999999999999988 6799999999999999998753 2358999999998732115678999998865
Q ss_pred hhhccChH------HHHHHHHHHHhhcccCcEEEEEe
Q 043471 129 LLMYLSDK------EVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 129 ~~~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
...+.... ....+++++.++|+|||.+++..
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 43333211 02579999999999999999964
No 275
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.54 E-value=9e-15 Score=137.46 Aligned_cols=127 Identities=16% Similarity=0.225 Sum_probs=97.0
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDLTF 116 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~ 116 (485)
...+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.... ++++++++|+.+ ++
T Consensus 99 ~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~~ 175 (275)
T 1yb2_A 99 ASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FI 175 (275)
T ss_dssp -------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CC
T ss_pred HHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---cC
Confidence 346667777888899999999999999999987 679999999999999999876433 589999999976 23
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
++++||+|++ +.++ ...+++++.++|+|||++++.++... ..+.+...+++.||..
T Consensus 176 ~~~~fD~Vi~-----~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~---------------~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 176 SDQMYDAVIA-----DIPD--PWNHVQKIASMMKPGSVATFYLPNFD---------------QSEKTVLSLSASGMHH 231 (275)
T ss_dssp CSCCEEEEEE-----CCSC--GGGSHHHHHHTEEEEEEEEEEESSHH---------------HHHHHHHHSGGGTEEE
T ss_pred cCCCccEEEE-----cCcC--HHHHHHHHHHHcCCCCEEEEEeCCHH---------------HHHHHHHHHHHCCCeE
Confidence 5678999998 4455 34899999999999999999865321 2345566677777743
No 276
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.54 E-value=4.7e-15 Score=134.03 Aligned_cols=107 Identities=18% Similarity=0.260 Sum_probs=85.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCC-CCCCCCCCeeEEEhhh
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSP-DLTFSEDSVDMMFSNW 128 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~-~~~~~~~~~D~v~~~~ 128 (485)
++.+|||||||+|.++..+++.. .+|+|+|+|+++++.|+++.. ...|+.++++|+.++ +..+++++||.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56799999999999999999884 579999999999999988753 235899999998773 1125789999999986
Q ss_pred hhhccChHHH------HHHHHHHHhhcccCcEEEEEec
Q 043471 129 LLMYLSDKEV------EKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 129 ~~~~~~~~~~------~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
...+...... ..+++++.++|||||.+++...
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 5444332211 2599999999999999999654
No 277
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.54 E-value=1.8e-14 Score=140.89 Aligned_cols=106 Identities=19% Similarity=0.244 Sum_probs=90.3
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCCCCCCCCCeeEEEhhhhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPDLTFSEDSVDMMFSNWLLM 131 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~ 131 (485)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++....+ +++++++|+.+ .+.++++||+|+++..++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~--~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDE--ALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT--TSCTTCCEEEEEECCCCC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhh--ccccCCCeEEEEECCchh
Confidence 467899999999999999999999999999999999999998754322 58999999987 444568999999998888
Q ss_pred c---cChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 132 Y---LSDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 132 ~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+ ........+++++.++|+|||.+++...
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 7 3334477999999999999999999644
No 278
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=1.4e-14 Score=139.04 Aligned_cols=111 Identities=20% Similarity=0.274 Sum_probs=93.7
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCc---EEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGH---VIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDL 114 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~---v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~ 114 (485)
+.....+++.+...++.+|||||||+|.++..+++.+.+ |+|+|+|+++++.|+++... ..+++++++|+.+.
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~-- 138 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG-- 138 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC--
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc--
Confidence 355677888888888999999999999999999998665 99999999999999987532 24699999999873
Q ss_pred CCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 115 TFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 115 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+.++++||+|++..+++|++ +++.++|||||.+++...
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred cccCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 33467899999999999987 357889999999999754
No 279
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.54 E-value=6.3e-15 Score=133.88 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=75.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCC-hHHHHHH---HHHcC--CCCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFI-DSVIKKN---EEVNG--HFENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s-~~~~~~a---~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
.++.+|||||||+|.++..++++ +.+|+|+|+| +.|++.| +++.. ..+++.++++|+..++..+ .+.+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~-~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL-KNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG-TTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhc-cCeEEEE
Confidence 46789999999999999999954 6789999999 7777776 55432 2358999999998843211 2566666
Q ss_pred Ehhhhhhc----c-ChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 125 FSNWLLMY----L-SDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 125 ~~~~~~~~----~-~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
+++....+ . .+ ...++++++|+|||||.+++.
T Consensus 102 ~~~~~~~~~~~~~~~~--~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKP--NRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp EEESCCHHHHHHHHTT--CHHHHHHHHTTEEEEEEEEEE
T ss_pred EEeCCCcHHhhhhhcc--hHHHHHHHHHhcCCCcEEEEE
Confidence 65532211 1 11 247899999999999999994
No 280
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.54 E-value=3.8e-15 Score=144.33 Aligned_cols=155 Identities=16% Similarity=0.273 Sum_probs=92.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC--CEEEEEeCCHHHHHHHHHHhcC------------CCCCeEEE
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD--VHVVGIDLSINMISFALERAIG------------LKCSVEFE 336 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~------------~~~~i~~~ 336 (485)
....++..+.+.++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|++++.. ...++++.
T Consensus 93 ~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 93 DINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 356677777888999999999999999999998753 7999999999999999998763 23579999
Q ss_pred EccCCCC--CCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhc---------
Q 043471 337 VADCTKK--TYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQR--------- 405 (485)
Q Consensus 337 ~~d~~~~--~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--------- 405 (485)
.+|+.+. ++++++||+|++. .+++..+++++.++|||||++++....... .......+...
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~l~~~~~~~~~~~~ 244 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNITQ---VIELLDGIRTCELALSCEKI 244 (336)
T ss_dssp ESCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSHHH---HHHHHHHHHHHTCCEEEEEE
T ss_pred ECChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCHHH---HHHHHHHHHhcCCCcccceE
Confidence 9999886 4566789999984 345556899999999999999987643211 00111111110
Q ss_pred ------CCCC----CCHHHHHHHHHhCCCeEEEEeecc
Q 043471 406 ------GYDL----HDVKSYGQMLKDAGFVDIIAEDRT 433 (485)
Q Consensus 406 ------~~~~----~~~~~~~~~l~~aGf~~~~~~~~~ 433 (485)
.+.. ....++.+.|+++||+++++....
T Consensus 245 ~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 245 SEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp ECCCCCCEEECC--------------------------
T ss_pred EEecccceEEEeecccccchhhhhcccccccccccccc
Confidence 0000 011278899999999998876543
No 281
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.53 E-value=3.2e-15 Score=136.22 Aligned_cols=148 Identities=15% Similarity=0.189 Sum_probs=95.4
Q ss_pred HHHHHHHHHcCCC-CCCEEEEECCCCChhHHHHhhcCC-CEEEEEeCCHHHHHHHHHHhcCC----CCCeEEEE-ccCCC
Q 043471 270 ETTKEFVAKLDLK-PGQKVLDVGCGIGGGDFYMADKFD-VHVVGIDLSINMISFALERAIGL----KCSVEFEV-ADCTK 342 (485)
Q Consensus 270 ~~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~----~~~i~~~~-~d~~~ 342 (485)
.++.++++.+.+. ++.+|||||||+|.++..+++. + .+|+|+|+|+.|++.|+++.... ..++.+.. .|+..
T Consensus 23 ~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (232)
T 3opn_A 23 LKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ 101 (232)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS
T ss_pred HHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc
Confidence 3566778888665 4669999999999999999988 5 49999999999999987754311 01222222 22221
Q ss_pred CCCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCC------CCCCHHHHH
Q 043471 343 KTYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGY------DLHDVKSYG 416 (485)
Q Consensus 343 ~~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 416 (485)
..||.+.+..++.++ ..++++++|+|||||++++.. .+..... .......+. ...+.+++.
T Consensus 102 -----~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~--~p~~e~~---~~~~~~~G~~~d~~~~~~~~~~l~ 168 (232)
T 3opn_A 102 -----GRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI--KPQFEAG---REQVGKNGIIRDPKVHQMTIEKVL 168 (232)
T ss_dssp -----CCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--CHHHHSC---HHHHC-CCCCCCHHHHHHHHHHHH
T ss_pred -----CCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE--CcccccC---HHHhCcCCeecCcchhHHHHHHHH
Confidence 123444443333333 789999999999999999863 1100000 001101110 113578899
Q ss_pred HHHHhCCCeEEEEee
Q 043471 417 QMLKDAGFVDIIAED 431 (485)
Q Consensus 417 ~~l~~aGf~~~~~~~ 431 (485)
++++++||+++.+..
T Consensus 169 ~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 169 KTATQLGFSVKGLTF 183 (232)
T ss_dssp HHHHHHTEEEEEEEE
T ss_pred HHHHHCCCEEEEEEE
Confidence 999999999987754
No 282
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.53 E-value=1.4e-14 Score=129.58 Aligned_cols=105 Identities=9% Similarity=0.122 Sum_probs=87.2
Q ss_pred CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCC-CCCCCCCccEEEEccccc
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTK-KTYPENSFDVIYSRDTIL 360 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~-~~~~~~~fD~i~~~~~~~ 360 (485)
++.+|||+|||+|.++..++.+...+|+|+|+|+.|++.|++++...+ .+++++++|+.+ ++.++++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~- 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF- 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS-
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC-
Confidence 578999999999999998777743599999999999999999886444 489999999876 45556789999998774
Q ss_pred ccCCHHHHHHHHHh--cCCCCcEEEEEecc
Q 043471 361 HIQDKPALFKSFFK--WLKPGGTVLISDYC 388 (485)
Q Consensus 361 ~~~~~~~~l~~~~~--~LkpgG~l~i~~~~ 388 (485)
+..+...+++.+.+ +|+|||.+++....
T Consensus 133 ~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 RRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp STTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 45678888999866 59999999988654
No 283
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.53 E-value=2.9e-14 Score=130.37 Aligned_cols=106 Identities=18% Similarity=0.342 Sum_probs=83.6
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc-------CCCCCeEEEEccCCC-CC--CCCCC
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI-------GLKCSVEFEVADCTK-KT--YPENS 349 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~-------~~~~~i~~~~~d~~~-~~--~~~~~ 349 (485)
..++.+|||||||+|.++..+++.. +..++|+|+|+.|++.|++++. ....++.++++|+.+ ++ +++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 4556799999999999999999886 5799999999999999987753 122479999999987 55 67889
Q ss_pred ccEEEEcccccccCC--------HHHHHHHHHhcCCCCcEEEEEe
Q 043471 350 FDVIYSRDTILHIQD--------KPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 350 fD~i~~~~~~~~~~~--------~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
||.|++...-.+... ...+++++.++|||||.+++..
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 999987544322211 1579999999999999999874
No 284
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.53 E-value=2.1e-14 Score=131.30 Aligned_cols=108 Identities=18% Similarity=0.255 Sum_probs=81.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHc--------CCCCCeEEEEeeccCCCCC--CCCC
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVN--------GHFENVKFMCADVTSPDLT--FSED 119 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~--------~~~~~~~~~~~d~~~~~~~--~~~~ 119 (485)
..++.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|+++. ....|++++++|+.+. ++ ++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-LPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-HHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-hhhhCCCc
Confidence 345678999999999999999987 468999999999999988653 2346899999999762 33 6788
Q ss_pred CeeEEEhhhhhhccChHH------HHHHHHHHHhhcccCcEEEEEec
Q 043471 120 SVDMMFSNWLLMYLSDKE------VEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~------~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+||.|+++..-.|..... ...+++++.++|+|||.+++...
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 999998765433322100 14799999999999999998643
No 285
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.53 E-value=2.4e-14 Score=126.31 Aligned_cols=121 Identities=12% Similarity=0.074 Sum_probs=95.5
Q ss_pred chHHHHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCC
Q 043471 268 GIETTKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKT 344 (485)
Q Consensus 268 ~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~ 344 (485)
.......+++.+. ..++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++.. ...+++++++|+.+..
T Consensus 28 ~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 107 (187)
T 2fhp_A 28 TDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRAL 107 (187)
T ss_dssp CHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHH
Confidence 3455566666663 457889999999999999988886446999999999999999998753 3347999999987631
Q ss_pred ----CCCCCccEEEEcccccccCCHHHHHHHH--HhcCCCCcEEEEEeccc
Q 043471 345 ----YPENSFDVIYSRDTILHIQDKPALFKSF--FKWLKPGGTVLISDYCK 389 (485)
Q Consensus 345 ----~~~~~fD~i~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~i~~~~~ 389 (485)
.++++||+|++...++ ..+....++.+ .++|+|||.+++.....
T Consensus 108 ~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 108 EQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 2257899999988754 45778888888 89999999999986543
No 286
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.53 E-value=2.1e-14 Score=139.42 Aligned_cols=104 Identities=24% Similarity=0.287 Sum_probs=89.2
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCccEEEEccc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSFDVIYSRDT 358 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~ 358 (485)
+.++.+|||||||+|.++..+++....+|+|+|+| .+++.|++++. ++..+++++.+|+.++++++++||+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 45678999999999999999998833499999999 49999999876 4445699999999999988899999999765
Q ss_pred cc---ccCCHHHHHHHHHhcCCCCcEEEEE
Q 043471 359 IL---HIQDKPALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 359 ~~---~~~~~~~~l~~~~~~LkpgG~l~i~ 385 (485)
.+ +..+...+++++.++|||||+++..
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 43 4478999999999999999998754
No 287
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=4e-14 Score=127.92 Aligned_cols=113 Identities=28% Similarity=0.291 Sum_probs=94.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC--CEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD--VHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYP 346 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~ 346 (485)
.....+++.+.+.++.+|||+|||+|.++..+++..+ .+|+++|+|+.+++.|++++...+ .++++..+|+......
T Consensus 64 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP 143 (215)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC
Confidence 4566778888888999999999999999999998864 799999999999999999875322 3689999998543223
Q ss_pred CCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 347 ENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+++||+|++..+++|++ +++.++|||||++++....
T Consensus 144 ~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred CCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 57899999999999986 4889999999999998643
No 288
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.53 E-value=1.3e-14 Score=128.47 Aligned_cols=134 Identities=20% Similarity=0.190 Sum_probs=106.1
Q ss_pred ccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCC
Q 043471 37 DLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPD 113 (485)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~ 113 (485)
....+.+..+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++... .++++++++|+.+ .
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~ 94 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-A 94 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-H
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-h
Confidence 34556677778888888899999999999999999999889999999999999999986432 2579999999875 1
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcce
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQI 192 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (485)
++ ..++||+|++..++++ ...+++++.++|+|||.+++...... ....+...+++.||
T Consensus 95 ~~-~~~~~D~v~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~~~~~---------------~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 95 LC-KIPDIDIAVVGGSGGE-----LQEILRIIKDKLKPGGRIIVTAILLE---------------TKFEAMECLRDLGF 152 (192)
T ss_dssp HT-TSCCEEEEEESCCTTC-----HHHHHHHHHHTEEEEEEEEEEECBHH---------------HHHHHHHHHHHTTC
T ss_pred cc-cCCCCCEEEECCchHH-----HHHHHHHHHHhcCCCcEEEEEecCcc---------------hHHHHHHHHHHCCC
Confidence 21 1258999999876654 35799999999999999999765321 34556777888887
No 289
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.53 E-value=2.1e-14 Score=131.74 Aligned_cols=149 Identities=15% Similarity=0.221 Sum_probs=107.0
Q ss_pred HHhccCCCC-CCCcEEEEcCCC--CcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCCC--CCeEEEEeeccCCCC--
Q 043471 45 EVLSLLPPY-EGKTVLEFGAGI--GRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGHF--ENVKFMCADVTSPDL-- 114 (485)
Q Consensus 45 ~~~~~~~~~-~~~~vLDiGcG~--G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~-- 114 (485)
+....+... ...+|||||||+ +.++..++++ +.+|+++|.|+.|++.|+++.... .+++|+++|+.+++.
T Consensus 68 rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l 147 (277)
T 3giw_A 68 RAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASIL 147 (277)
T ss_dssp HHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHH
T ss_pred HHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhh
Confidence 344444433 346899999998 4455666554 679999999999999999987653 369999999987421
Q ss_pred --CCCCCCee-----EEEhhhhhhccChHH-HHHHHHHHHhhcccCcEEEEEeccCCCCCc--------cccCCCCCCCC
Q 043471 115 --TFSEDSVD-----MMFSNWLLMYLSDKE-VEKLAERMVKWLKVGGYIFFRESCFHQSGD--------SKRKHNPTHYR 178 (485)
Q Consensus 115 --~~~~~~~D-----~v~~~~~~~~~~~~~-~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--------~~~~~~~~~~~ 178 (485)
+...+.|| .|+++.+|||+++.. ...+++++.+.|+|||+|++++.+...... ......+..++
T Consensus 148 ~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~r 227 (277)
T 3giw_A 148 DAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLR 227 (277)
T ss_dssp TCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCC
T ss_pred cccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccC
Confidence 10024455 588999999999865 578999999999999999999876542211 01233456677
Q ss_pred ChhHHHHHhhhcceecC
Q 043471 179 EPRFYSKVFKECQIQDA 195 (485)
Q Consensus 179 ~~~~~~~~~~~~~~~~~ 195 (485)
+.+.+..+|. ||...
T Consensus 228 s~~ei~~~f~--Glelv 242 (277)
T 3giw_A 228 THAEAEEFFE--GLELV 242 (277)
T ss_dssp CHHHHHHTTT--TSEEC
T ss_pred CHHHHHHHhC--CCccc
Confidence 8888888885 66543
No 290
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=1.4e-14 Score=128.98 Aligned_cols=110 Identities=20% Similarity=0.202 Sum_probs=87.0
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhh-c--CcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKK-A--GHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
...++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.|+++... .++++++++|+.++. .+.+++||+|
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~fD~v 97 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD-KYIDCPVKAV 97 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG-GTCCSCEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh-hhccCCceEE
Confidence 3456889999999999999999987 2 5999999999999999987543 257999999998742 1456899999
Q ss_pred Ehhhhh-h-----c-cChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 125 FSNWLL-M-----Y-LSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 125 ~~~~~~-~-----~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+++..+ . + ........+++++.++|+|||++++....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 987644 1 1 11223567999999999999999997654
No 291
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.53 E-value=9.9e-15 Score=127.67 Aligned_cols=118 Identities=13% Similarity=0.093 Sum_probs=92.9
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCC-CCCC
Q 043471 271 TTKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTK-KTYP 346 (485)
Q Consensus 271 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~-~~~~ 346 (485)
....+++.+. ..++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...+ .++++..+|+.+ ++..
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL 97 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh
Confidence 3445566665 56788999999999999999998733599999999999999999986543 468999999876 3333
Q ss_pred CCCccEEEEcccccccCCHHHHHHHHH--hcCCCCcEEEEEeccc
Q 043471 347 ENSFDVIYSRDTILHIQDKPALFKSFF--KWLKPGGTVLISDYCK 389 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~ 389 (485)
+++||+|++...++ ......+++.+. ++|+|||.+++.....
T Consensus 98 ~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 98 TGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp CSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred cCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 46799999987653 235667778887 9999999999986544
No 292
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.52 E-value=7.6e-14 Score=125.20 Aligned_cols=126 Identities=13% Similarity=0.103 Sum_probs=102.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCccEEEEcc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSFDVIYSRD 357 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~ 357 (485)
++++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++. ++..++++..+|..+...++++||+|+..+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 4578899999999999999999874 3489999999999999999986 444679999999988665445799988765
Q ss_pred cccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEe
Q 043471 358 TILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAE 430 (485)
Q Consensus 358 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 430 (485)
+.- .-...++.+..+.|+++|+|+++- ....+.+++.|.++||.+++..
T Consensus 99 mGg--~lI~~IL~~~~~~l~~~~~lIlqp----------------------~~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 99 MGG--RLIADILNNDIDKLQHVKTLVLQP----------------------NNREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp ECH--HHHHHHHHHTGGGGTTCCEEEEEE----------------------SSCHHHHHHHHHHTTEEEEEEE
T ss_pred Cch--HHHHHHHHHHHHHhCcCCEEEEEC----------------------CCChHHHHHHHHHCCCEEEEEE
Confidence 433 235678889999999999999982 1236789999999999987644
No 293
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.52 E-value=2.9e-14 Score=136.75 Aligned_cols=113 Identities=23% Similarity=0.299 Sum_probs=96.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC--CEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD--VHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYP 346 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~ 346 (485)
.....+++.+.+.++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++...+ .++++..+|+.+.+.+
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 5677888888899999999999999999999998752 469999999999999999876433 3599999999886545
Q ss_pred CCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 347 ENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+++||+|++..+++|+. +++.++|||||++++....
T Consensus 142 ~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred CCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 67899999999999987 5788999999999998543
No 294
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=2e-14 Score=129.97 Aligned_cols=113 Identities=21% Similarity=0.258 Sum_probs=92.9
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc---CcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA---GHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPD 113 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~ 113 (485)
.+.....+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|+++... .++++++.+|+...
T Consensus 62 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~- 140 (215)
T 2yxe_A 62 AIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG- 140 (215)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC-
T ss_pred cHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC-
Confidence 34455677888888889999999999999999999885 7999999999999999987532 24799999998542
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+ ..+++||+|++..+++|+++ ++.++|+|||.+++....
T Consensus 141 ~-~~~~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 141 Y-EPLAPYDRIYTTAAGPKIPE--------PLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp C-GGGCCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEESS
T ss_pred C-CCCCCeeEEEECCchHHHHH--------HHHHHcCCCcEEEEEECC
Confidence 2 13578999999999999873 688999999999997543
No 295
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.52 E-value=9.6e-15 Score=127.74 Aligned_cols=118 Identities=10% Similarity=0.124 Sum_probs=90.2
Q ss_pred hhhhHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhc-CcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCC
Q 043471 40 KEERPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKA-GHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDL 114 (485)
Q Consensus 40 ~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~ 114 (485)
...+..+++.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++.... ++++++++|+.+. +
T Consensus 16 ~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~ 94 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA-I 94 (177)
T ss_dssp --CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH-H
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh-H
Confidence 345566666665 5678899999999999999999885 59999999999999999876433 3699999998762 2
Q ss_pred CCCCCCeeEEEhhhhhhccChHHHHHHHHHHH--hhcccCcEEEEEecc
Q 043471 115 TFSEDSVDMMFSNWLLMYLSDKEVEKLAERMV--KWLKVGGYIFFRESC 161 (485)
Q Consensus 115 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~~ 161 (485)
+..+++||+|+++..++. .. ....++.+. ++|+|||.+++....
T Consensus 95 ~~~~~~fD~i~~~~~~~~-~~--~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAK-ET--IVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HHBCSCEEEEEECCSSHH-HH--HHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred HhhcCCCCEEEECCCCCc-ch--HHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 223467999999865432 22 456777776 999999999997654
No 296
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.52 E-value=3.8e-14 Score=127.99 Aligned_cols=107 Identities=20% Similarity=0.314 Sum_probs=85.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCCCCCCCeeEEEhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLTFSEDSVDMMFSNW 128 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~ 128 (485)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..++++++++|+.+++-.+++++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 45779999999999999999988 5689999999999999988753 2258999999998732116678999999986
Q ss_pred hhhccChH------HHHHHHHHHHhhcccCcEEEEEe
Q 043471 129 LLMYLSDK------EVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 129 ~~~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
...+.... ....+++++.++|+|||.+++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 54433211 12579999999999999999964
No 297
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.52 E-value=6.4e-14 Score=130.15 Aligned_cols=132 Identities=20% Similarity=0.291 Sum_probs=105.2
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTS 111 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~ 111 (485)
+.+.....++..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|+++.. ...+++++++|+.+
T Consensus 77 ~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 77 VHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred ccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 45556677888888889999999999999999999998 6799999999999999998753 22359999999985
Q ss_pred CCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcc
Q 043471 112 PDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQ 191 (485)
Q Consensus 112 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (485)
. +++++||+|+++ .++ ...+++++.++|+|||.+++..+... ....+...+++.|
T Consensus 157 ~---~~~~~~D~v~~~-----~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~---------------~~~~~~~~l~~~g 211 (255)
T 3mb5_A 157 G---IEEENVDHVILD-----LPQ--PERVVEHAAKALKPGGFFVAYTPCSN---------------QVMRLHEKLREFK 211 (255)
T ss_dssp C---CCCCSEEEEEEC-----SSC--GGGGHHHHHHHEEEEEEEEEEESSHH---------------HHHHHHHHHHHTG
T ss_pred c---cCCCCcCEEEEC-----CCC--HHHHHHHHHHHcCCCCEEEEEECCHH---------------HHHHHHHHHHHcC
Confidence 3 467889999984 344 34799999999999999999755321 2345667777777
Q ss_pred --eec
Q 043471 192 --IQD 194 (485)
Q Consensus 192 --~~~ 194 (485)
|..
T Consensus 212 ~~f~~ 216 (255)
T 3mb5_A 212 DYFMK 216 (255)
T ss_dssp GGBSC
T ss_pred CCccc
Confidence 744
No 298
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=2.4e-14 Score=125.68 Aligned_cols=130 Identities=18% Similarity=0.227 Sum_probs=103.7
Q ss_pred ccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCC
Q 043471 37 DLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDL 114 (485)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~ 114 (485)
.........+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++... .++++++++|+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--- 94 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED--- 94 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---
Confidence 34456667788888878889999999999999999999888999999999999999987532 2579999999976
Q ss_pred CCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcce
Q 043471 115 TFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQI 192 (485)
Q Consensus 115 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (485)
++++++||+|+++.+ .+ ...+++++.++ |||.+++...... ......+.+++.|+
T Consensus 95 ~~~~~~~D~i~~~~~----~~--~~~~l~~~~~~--~gG~l~~~~~~~~---------------~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT----KN--IEKIIEILDKK--KINHIVANTIVLE---------------NAAKIINEFESRGY 149 (183)
T ss_dssp HGGGCCCSEEEECSC----SC--HHHHHHHHHHT--TCCEEEEEESCHH---------------HHHHHHHHHHHTTC
T ss_pred cccCCCCcEEEECCc----cc--HHHHHHHHhhC--CCCEEEEEecccc---------------cHHHHHHHHHHcCC
Confidence 235579999999876 33 56899999998 9999999765321 23456677777775
No 299
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=2.8e-14 Score=139.36 Aligned_cols=115 Identities=15% Similarity=0.175 Sum_probs=92.5
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCC-----CCeEEEEeeccCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHF-----ENVKFMCADVTSPDLT 115 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~ 115 (485)
.+.+++.++..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.... .+++++.+|+.+ +
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~---~ 287 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS---G 287 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT---T
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc---c
Confidence 346788888877899999999999999999998 579999999999999999865321 258889999876 2
Q ss_pred CCCCCeeEEEhhhhhhcc---ChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 116 FSEDSVDMMFSNWLLMYL---SDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+++++||+|+++..+++. .+....++++++.++|+|||.+++...
T Consensus 288 ~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 288 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 456899999999877753 333355799999999999999999643
No 300
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.52 E-value=2.9e-14 Score=132.79 Aligned_cols=113 Identities=11% Similarity=0.116 Sum_probs=88.5
Q ss_pred HhccCCCC-CCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCCCC
Q 043471 46 VLSLLPPY-EGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSEDS 120 (485)
Q Consensus 46 ~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~~~ 120 (485)
+...+... ++.+|||+|||+|.++..+++++. +|+|+|+++.+++.|+++... ..+++++++|+.+....+++++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 33445566 788999999999999999999865 999999999999999987532 2369999999988543355789
Q ss_pred eeEEEhhhhhhcc------------------ChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 121 VDMMFSNWLLMYL------------------SDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 121 ~D~v~~~~~~~~~------------------~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
||+|+++-.+... .......+++.+.++|+|||.+++.
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 9999997433222 1123568999999999999999995
No 301
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=1.2e-13 Score=128.36 Aligned_cols=110 Identities=16% Similarity=0.197 Sum_probs=90.3
Q ss_pred HHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC---CC--CCeEEEEccCCCC-------
Q 043471 277 AKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG---LK--CSVEFEVADCTKK------- 343 (485)
Q Consensus 277 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~---~~--~~i~~~~~d~~~~------- 343 (485)
..+...++.+|||+|||+|.++..++++. +.+|+|+|+++.+++.|++++.. .+ .+++++++|+.+.
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~ 109 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA 109 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh
Confidence 33456678899999999999999999986 57999999999999999999865 33 3599999999886
Q ss_pred CCCCCCccEEEEccccccc------------------CCHHHHHHHHHhcCCCCcEEEEEe
Q 043471 344 TYPENSFDVIYSRDTILHI------------------QDKPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 344 ~~~~~~fD~i~~~~~~~~~------------------~~~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
++++++||+|+++..+... .+...+++.+.++|||||++++..
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 3567899999998544322 247889999999999999998873
No 302
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.51 E-value=1.3e-14 Score=133.63 Aligned_cols=121 Identities=17% Similarity=0.144 Sum_probs=92.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCC---CCCeeEEE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFS---EDSVDMMF 125 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~---~~~~D~v~ 125 (485)
.++.+|||||||+|..+..++.. +.+|+|+|+|+.|++.|+++... .++++++++|+.+ ++++ +++||+|+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAET--FGQRKDVRESYDIVT 146 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHH--HTTCTTTTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHH--hcccccccCCccEEE
Confidence 46789999999999999999954 67999999999999999886432 2479999999987 3332 57999999
Q ss_pred hhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 126 SNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
+.. +.+ ...+++++.++|+|||.+++...... ......+...++..|+..
T Consensus 147 ~~~----~~~--~~~~l~~~~~~LkpgG~l~~~~g~~~-------------~~~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 147 ARA----VAR--LSVLSELCLPLVKKNGLFVALKAASA-------------EEELNAGKKAITTLGGEL 196 (240)
T ss_dssp EEC----CSC--HHHHHHHHGGGEEEEEEEEEEECC-C-------------HHHHHHHHHHHHHTTEEE
T ss_pred Eec----cCC--HHHHHHHHHHhcCCCCEEEEEeCCCc-------------hHHHHHHHHHHHHcCCeE
Confidence 876 344 67899999999999999988532110 011234556677777743
No 303
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.51 E-value=6.6e-15 Score=131.69 Aligned_cols=120 Identities=14% Similarity=0.164 Sum_probs=90.8
Q ss_pred cChhhhHHHhccCCCC-CCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCC
Q 043471 38 LDKEERPEVLSLLPPY-EGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPD 113 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~ 113 (485)
.....+..+++.+... ++.+|||+|||+|.++..+++++. +|+|+|+|+.|++.|+++... ..+++++++|+.+.
T Consensus 37 ~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~- 115 (202)
T 2fpo_A 37 TTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF- 115 (202)
T ss_dssp -CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH-
T ss_pred CHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH-
Confidence 3444555566555442 678999999999999999888764 899999999999999987532 24899999998763
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHh--hcccCcEEEEEecc
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVK--WLKVGGYIFFRESC 161 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~--~L~pgG~l~~~~~~ 161 (485)
++..+++||+|++...+ +... ...+++.+.+ +|+|||.+++....
T Consensus 116 ~~~~~~~fD~V~~~~p~-~~~~--~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 116 LAQKGTPHNIVFVDPPF-RRGL--LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp HSSCCCCEEEEEECCSS-STTT--HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred HhhcCCCCCEEEECCCC-CCCc--HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 23356789999987653 3443 5578888865 59999999997654
No 304
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.51 E-value=3.7e-14 Score=128.37 Aligned_cols=117 Identities=14% Similarity=0.191 Sum_probs=93.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcC--CC-CCeEEEEccCCCC-
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIG--LK-CSVEFEVADCTKK- 343 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~--~~-~~i~~~~~d~~~~- 343 (485)
..+..++.....+++.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++.. .. .+++++.+|+.+.
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 344445555555556699999999999999999875 57999999999999999999863 43 5799999988664
Q ss_pred -CCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 344 -TYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 344 -~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
.+++++||+|++... ..+...+++++.++|||||.+++.+...
T Consensus 123 ~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp GGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred HHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 233689999998653 3567889999999999999999976543
No 305
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.51 E-value=3.1e-15 Score=129.99 Aligned_cols=120 Identities=13% Similarity=0.061 Sum_probs=89.5
Q ss_pred ChhhhHHHhccCCC--CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCC--
Q 043471 39 DKEERPEVLSLLPP--YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPD-- 113 (485)
Q Consensus 39 ~~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~-- 113 (485)
....+..+++.+.. .++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++....+ +++++++|+.+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 103 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPE 103 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHh
Confidence 34455556655543 267899999999999999999998889999999999999998754222 7999999987621
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHH--hhcccCcEEEEEeccC
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMV--KWLKVGGYIFFRESCF 162 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~~~ 162 (485)
.+...++||+|+++..++ .. ....++.+. ++|+|||.+++.....
T Consensus 104 ~~~~~~~~D~i~~~~~~~--~~--~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 104 AKAQGERFTVAFMAPPYA--MD--LAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HHHTTCCEEEEEECCCTT--SC--TTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred hhccCCceEEEEECCCCc--hh--HHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 111124899999987655 22 235666666 9999999999976643
No 306
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.51 E-value=3.6e-14 Score=130.01 Aligned_cols=109 Identities=19% Similarity=0.257 Sum_probs=84.3
Q ss_pred hccCCCCCCCcEEEEcCCCCcchHHHHhh-c--CcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCC-CCCCCCCee
Q 043471 47 LSLLPPYEGKTVLEFGAGIGRFTGELAKK-A--GHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPD-LTFSEDSVD 122 (485)
Q Consensus 47 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~D 122 (485)
++.+...++.+|||+|||+|.++..|++. + .+|+|+|+|+.+++.+.+......+++++++|+.+.. +++.+++||
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEE
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEE
Confidence 34556677889999999999999999987 2 6899999998877665554332268999999998743 344578999
Q ss_pred EEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 123 MMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
+|++... .++ ....++.++.++|+|||.++++.
T Consensus 150 ~V~~~~~---~~~-~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 150 VIFADVA---QPD-QTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEECCC---CTT-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcCC---Ccc-HHHHHHHHHHHHcCCCeEEEEEE
Confidence 9998643 222 24567889999999999999953
No 307
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.51 E-value=1.5e-16 Score=146.67 Aligned_cols=100 Identities=19% Similarity=0.196 Sum_probs=86.3
Q ss_pred CCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCCCCCCCCeeEEEhhhhh
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDLTFSEDSVDMMFSNWLL 130 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~ 130 (485)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.... ++++++++|+.+. + ++++||+|+++.++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL--A-SFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--G-GGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh--c-ccCCCCEEEECCCc
Confidence 6889999999999999999999999999999999999999875322 3799999999873 3 56799999999888
Q ss_pred hccChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 131 MYLSDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
++.... ...+.++.++|+|||.+++.
T Consensus 155 ~~~~~~--~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GGPDYA--TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SSGGGG--GSSSBCTTTSCSSCHHHHHH
T ss_pred CCcchh--hhHHHHHHhhcCCcceeHHH
Confidence 888763 35778899999999997764
No 308
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.51 E-value=1e-13 Score=126.85 Aligned_cols=109 Identities=18% Similarity=0.331 Sum_probs=89.6
Q ss_pred HcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCC-C-CCCCCccE
Q 043471 278 KLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKK-T-YPENSFDV 352 (485)
Q Consensus 278 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~-~-~~~~~fD~ 352 (485)
.+...++.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++.. +..+++++.+|+.+. + ..+++||+
T Consensus 66 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 66 LIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDM 145 (232)
T ss_dssp HHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEE
T ss_pred HHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccE
Confidence 3344567899999999999999999854 67999999999999999998864 335899999999764 3 22688999
Q ss_pred EEEcccccccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 353 IYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 353 i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
|++... ..+...+++++.++|||||++++.+...
T Consensus 146 V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 146 IFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp EEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred EEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 997643 4567889999999999999998875443
No 309
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.51 E-value=1.1e-13 Score=126.29 Aligned_cols=108 Identities=22% Similarity=0.363 Sum_probs=85.9
Q ss_pred hccCCCCCCCcEEEEcCCCCcchHHHHhh-c--CcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCC-CCCCCCee
Q 043471 47 LSLLPPYEGKTVLEFGAGIGRFTGELAKK-A--GHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDL-TFSEDSVD 122 (485)
Q Consensus 47 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~D 122 (485)
++.+...++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.++++....++++++++|+.+... ....++||
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEE
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCce
Confidence 44455677889999999999999999987 3 69999999999999998887655789999999987321 11246899
Q ss_pred EEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 123 MMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
+|++... .++ ....++.++.++|+|||.+++.
T Consensus 146 ~v~~~~~---~~~-~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 146 VIFEDVA---QPT-QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEECCC---STT-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC---CHh-HHHHHHHHHHHhcCCCCEEEEE
Confidence 9997643 222 1345699999999999999997
No 310
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.51 E-value=8.2e-15 Score=127.29 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=91.7
Q ss_pred HHHHHHHHHcC--CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC-C-C
Q 043471 270 ETTKEFVAKLD--LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK-T-Y 345 (485)
Q Consensus 270 ~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~-~-~ 345 (485)
.....+++.+. ++++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++...+.++++.++|+.+. + .
T Consensus 26 ~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (171)
T 1ws6_A 26 RLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEA 104 (171)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhh
Confidence 34444555543 336789999999999999999987 56799999999999999998764333789999998763 2 1
Q ss_pred --CCCCccEEEEcccccccCCHHHHHHHHH--hcCCCCcEEEEEeccc
Q 043471 346 --PENSFDVIYSRDTILHIQDKPALFKSFF--KWLKPGGTVLISDYCK 389 (485)
Q Consensus 346 --~~~~fD~i~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~ 389 (485)
..++||+|++..+++ .+...+++.+. ++|+|||.+++.....
T Consensus 105 ~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 105 KAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred hccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 124799999998765 66777888888 9999999999986544
No 311
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.51 E-value=6.4e-14 Score=136.04 Aligned_cols=112 Identities=21% Similarity=0.241 Sum_probs=94.1
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCc
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSF 350 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~f 350 (485)
..+++.+...++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++. ++..+++++.+|+.+++++ ++|
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~ 117 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQV 117 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCE
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-Cce
Confidence 45666666778899999999999999999987445999999996 8899988875 4446899999999998765 689
Q ss_pred cEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEEe
Q 043471 351 DVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 351 D~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
|+|++..+++|+. +....+.+++++|||||.+++..
T Consensus 118 D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 118 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred eEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 9999998888874 56788899999999999998653
No 312
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.51 E-value=1.9e-13 Score=132.94 Aligned_cols=148 Identities=18% Similarity=0.219 Sum_probs=114.6
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCCCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~~~ 119 (485)
..+++.+......+|||||||+|.++..++++. .+++..|. |.+++.|+++... .++++++.+|+.+. + ..
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~--~--~~ 243 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD--P--LP 243 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS--C--CC
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC--C--CC
Confidence 456666666677899999999999999999984 46777886 8899999987643 35899999998763 2 23
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcccc----------CCCCCCCCChhHHHHHhhh
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKR----------KHNPTHYREPRFYSKVFKE 189 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 189 (485)
.+|+|++..++|+++++...++|+++++.|+|||.++|.+........... ....-.-++.+.|++++++
T Consensus 244 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~ 323 (353)
T 4a6d_A 244 EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSS 323 (353)
T ss_dssp CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHH
T ss_pred CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHH
Confidence 589999999999999988889999999999999999999876543321110 0111122478889999999
Q ss_pred cceecCC
Q 043471 190 CQIQDAS 196 (485)
Q Consensus 190 ~~~~~~~ 196 (485)
+||+...
T Consensus 324 AGf~~v~ 330 (353)
T 4a6d_A 324 AGFRDFQ 330 (353)
T ss_dssp HTCEEEE
T ss_pred CCCceEE
Confidence 9996543
No 313
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.51 E-value=6e-14 Score=137.58 Aligned_cols=111 Identities=23% Similarity=0.271 Sum_probs=93.1
Q ss_pred HHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCC-EEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCc
Q 043471 274 EFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDV-HVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSF 350 (485)
Q Consensus 274 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~f 350 (485)
.++......++.+|||||||+|.++..+++. +. +|+|+|+| .|++.|++++. ++..+++++.+|+.+++++ ++|
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~ 130 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKV 130 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCE
T ss_pred HHHhccccCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-Ccc
Confidence 3444456678899999999999999999988 55 99999999 99999999876 4445699999999998876 899
Q ss_pred cEEEEccccccc---CCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 351 DVIYSRDTILHI---QDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 351 D~i~~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
|+|++..+.+++ .++..+++++.++|||||.+++...
T Consensus 131 D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 131 DVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred eEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 999996655554 4688899999999999999987643
No 314
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.50 E-value=1.7e-14 Score=141.70 Aligned_cols=142 Identities=17% Similarity=0.182 Sum_probs=108.7
Q ss_pred HHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCC
Q 043471 44 PEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDS 120 (485)
Q Consensus 44 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 120 (485)
..+++.++ ..++.+|||||||+|..+..+++++ .+++++|+ +.+++.|++. ++++++.+|+.+ ++ +.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~~--~~-- 267 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----SGIEHVGGDMFA-SV--PQ-- 267 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTT-CC--CC--
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----CCCEEEeCCccc-CC--CC--
Confidence 45566665 4567899999999999999999985 47888899 9998877652 579999999976 33 33
Q ss_pred eeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCcc------c---cC----CCCCCCCChhHHHHHh
Q 043471 121 VDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDS------K---RK----HNPTHYREPRFYSKVF 187 (485)
Q Consensus 121 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~------~---~~----~~~~~~~~~~~~~~~~ 187 (485)
||+|++..++||++++....++++++++|+|||.+++.+......... . +. ......++.+.|..++
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll 347 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLS 347 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHH
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHH
Confidence 999999999999998777799999999999999999987654332211 0 00 0012234788899999
Q ss_pred hhcceecC
Q 043471 188 KECQIQDA 195 (485)
Q Consensus 188 ~~~~~~~~ 195 (485)
+++||...
T Consensus 348 ~~aGf~~~ 355 (372)
T 1fp1_D 348 KLSGFSKF 355 (372)
T ss_dssp HHTTCSEE
T ss_pred HHCCCceE
Confidence 99998543
No 315
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.50 E-value=1.8e-14 Score=133.14 Aligned_cols=114 Identities=16% Similarity=0.111 Sum_probs=87.7
Q ss_pred HHHhccC-CCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCC-CCC
Q 043471 44 PEVLSLL-PPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSP-DLT 115 (485)
Q Consensus 44 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~-~~~ 115 (485)
..++..+ ...++.+|||||||+|..+..+++. +.+|+|+|+|+++++.|+++.. ..++++++++|+.+. +..
T Consensus 52 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~ 131 (248)
T 3tfw_A 52 GQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL 131 (248)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC
T ss_pred HHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc
Confidence 3444443 4456789999999999999999987 6799999999999999998753 224799999998652 111
Q ss_pred CCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 116 FSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
...++||+|++... ......+++++.++|||||+|++.+...
T Consensus 132 ~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 132 GECPAFDLIFIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp CSCCCCSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred CCCCCeEEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 12358999998542 2235689999999999999999976644
No 316
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.50 E-value=1.5e-13 Score=123.18 Aligned_cols=124 Identities=15% Similarity=0.122 Sum_probs=99.4
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCC-CccEEEEc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPEN-SFDVIYSR 356 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~-~fD~i~~~ 356 (485)
++++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++. ++..++++..+|..+. ++.+ +||+|+..
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l~~~~~~D~Ivia 91 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-FEETDQVSVITIA 91 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-CCGGGCCCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-cccCcCCCEEEEc
Confidence 4578899999999999999999874 3589999999999999999986 4445799999998542 2333 69999876
Q ss_pred ccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEE
Q 043471 357 DTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIA 429 (485)
Q Consensus 357 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 429 (485)
++-- .-...++.+....|+|+|+++++-. .....+++.|.+.||.+++.
T Consensus 92 G~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~----------------------~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 92 GMGG--RLIARILEEGLGKLANVERLILQPN----------------------NREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp EECH--HHHHHHHHHTGGGCTTCCEEEEEES----------------------SCHHHHHHHHHHTTEEEEEE
T ss_pred CCCh--HHHHHHHHHHHHHhCCCCEEEEECC----------------------CCHHHHHHHHHHCCCEEEEE
Confidence 5422 1257789999999999999999821 24678899999999998765
No 317
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.50 E-value=4.5e-14 Score=134.28 Aligned_cols=135 Identities=19% Similarity=0.203 Sum_probs=101.2
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC-----CCCCeEEEEccCCCCCC--CCCCccE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG-----LKCSVEFEVADCTKKTY--PENSFDV 352 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~-----~~~~i~~~~~d~~~~~~--~~~~fD~ 352 (485)
.+++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.. ...+++++.+|+.+.+. ++++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3566899999999999999999875 46999999999999999998631 23579999999876543 3688999
Q ss_pred EEEcccccccCCH----HHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 353 IYSRDTILHIQDK----PALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 353 i~~~~~~~~~~~~----~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
|++.....+.+.. .+++++++++|||||++++...... . .......+.+.++++||..+.
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~-------~---------~~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW-------L---------DLELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTT-------T---------CHHHHHHHHHHHHHHTCSEEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc-------c---------chHHHHHHHHHHHhCCCCcEE
Confidence 9997655443322 6899999999999999999843210 0 011356788999999999876
Q ss_pred Eee
Q 043471 429 AED 431 (485)
Q Consensus 429 ~~~ 431 (485)
...
T Consensus 237 ~~~ 239 (304)
T 3bwc_A 237 YAL 239 (304)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 318
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.50 E-value=7.6e-14 Score=131.22 Aligned_cols=133 Identities=18% Similarity=0.295 Sum_probs=101.9
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCCCC
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~~~ 117 (485)
....+++.+. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..++++++++|+.+. ++
T Consensus 98 l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~---~~ 173 (276)
T 2b3t_A 98 LVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA---LA 173 (276)
T ss_dssp HHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG---GT
T ss_pred HHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh---cc
Confidence 3345566665 56789999999999999999976 6799999999999999998753 224799999998762 24
Q ss_pred CCCeeEEEhhh-------------hhhccCh----------HHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCC
Q 043471 118 EDSVDMMFSNW-------------LLMYLSD----------KEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNP 174 (485)
Q Consensus 118 ~~~~D~v~~~~-------------~~~~~~~----------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~ 174 (485)
+++||+|+++- +++|.+. .....+++++.++|+|||++++...
T Consensus 174 ~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~-------------- 239 (276)
T 2b3t_A 174 GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG-------------- 239 (276)
T ss_dssp TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC--------------
T ss_pred cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC--------------
Confidence 67899999972 3334331 2367899999999999999999522
Q ss_pred CCCCChhHHHHHhhhcceec
Q 043471 175 THYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~ 194 (485)
....+.+.+.++++||..
T Consensus 240 --~~~~~~~~~~l~~~Gf~~ 257 (276)
T 2b3t_A 240 --WQQGEAVRQAFILAGYHD 257 (276)
T ss_dssp --SSCHHHHHHHHHHTTCTT
T ss_pred --chHHHHHHHHHHHCCCcE
Confidence 124677888899988854
No 319
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.50 E-value=6.1e-14 Score=132.23 Aligned_cols=113 Identities=18% Similarity=0.269 Sum_probs=98.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCC----CCCeEEEEccCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGL----KCSVEFEVADCTKK 343 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~----~~~i~~~~~d~~~~ 343 (485)
.....++..+.+.++.+|||+|||+|.++..+++.. +.+++++|+++.+++.|++++... ..++++..+|+.+.
T Consensus 86 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 86 KDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 345677888888999999999999999999999864 569999999999999999987532 45899999999988
Q ss_pred CCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 344 TYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 344 ~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
++++++||+|++ +++++..+++++.++|+|||++++...
T Consensus 166 ~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 166 ELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 877789999998 456788999999999999999999864
No 320
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=4.7e-15 Score=133.90 Aligned_cols=134 Identities=18% Similarity=0.157 Sum_probs=83.9
Q ss_pred hhHHHhccCCC-CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCCCCCC
Q 043471 42 ERPEVLSLLPP-YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPDLTFS 117 (485)
Q Consensus 42 ~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~ 117 (485)
....+++.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ +++++++|+.+ +++
T Consensus 17 ~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~---~~~ 93 (215)
T 4dzr_A 17 LVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE---WLI 93 (215)
T ss_dssp HHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH---HHH
T ss_pred HHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh---hhh
Confidence 44556666655 67889999999999999999998 5599999999999999998765433 68899999876 234
Q ss_pred C-----CCeeEEEhhhhh------hccChHH------------------HHHHHHHHHhhcccCcE-EEEEeccCCCCCc
Q 043471 118 E-----DSVDMMFSNWLL------MYLSDKE------------------VEKLAERMVKWLKVGGY-IFFRESCFHQSGD 167 (485)
Q Consensus 118 ~-----~~~D~v~~~~~~------~~~~~~~------------------~~~~l~~~~~~L~pgG~-l~~~~~~~~~~~~ 167 (485)
+ ++||+|+++-.+ +++.... +..+++++.++|+|||+ +++. ...
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-~~~----- 167 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE-VGH----- 167 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE-CTT-----
T ss_pred hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE-ECC-----
Confidence 4 899999996433 2222211 16889999999999999 5553 321
Q ss_pred cccCCCCCCCCChhHHHHHhh--hcceec
Q 043471 168 SKRKHNPTHYREPRFYSKVFK--ECQIQD 194 (485)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 194 (485)
...+.+...+. +.||..
T Consensus 168 ----------~~~~~~~~~l~~~~~gf~~ 186 (215)
T 4dzr_A 168 ----------NQADEVARLFAPWRERGFR 186 (215)
T ss_dssp ----------SCHHHHHHHTGGGGGGTEE
T ss_pred ----------ccHHHHHHHHHHhhcCCce
Confidence 24567788888 778744
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.50 E-value=9.1e-15 Score=151.22 Aligned_cols=110 Identities=15% Similarity=0.167 Sum_probs=91.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCC--CeEEEEeeccCCCCCCCCCCeeEEEhhhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFE--NVKFMCADVTSPDLTFSEDSVDMMFSNWLL 130 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~ 130 (485)
.++.+|||||||.|.++..||+.|++|+|||+|+.+++.|+......+ +++|.+++++++.-.+++++||+|+|+.++
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 356799999999999999999999999999999999999998765433 799999999874224567899999999999
Q ss_pred hccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 131 MYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
+|++++.....+..+.+.|+++|..++.....
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99988653445567888899999877765543
No 322
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.50 E-value=1.2e-13 Score=124.94 Aligned_cols=124 Identities=6% Similarity=0.005 Sum_probs=100.1
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCccEEEEcc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSFDVIYSRD 357 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~ 357 (485)
++++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++. ++..++++..+|..+...++.+||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 5678899999999999999999874 3489999999999999999986 444579999999987654444699998755
Q ss_pred cccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 358 TILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 358 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
+-- .-...++.+..+.|+++|+|+++- ......+++.|.+.||.+++
T Consensus 99 mGg--~lI~~IL~~~~~~L~~~~~lIlq~----------------------~~~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 99 MGG--TLIRTILEEGAAKLAGVTKLILQP----------------------NIAAWQLREWSEQNNWLITS 145 (244)
T ss_dssp ECH--HHHHHHHHHTGGGGTTCCEEEEEE----------------------SSCHHHHHHHHHHHTEEEEE
T ss_pred Cch--HHHHHHHHHHHHHhCCCCEEEEEc----------------------CCChHHHHHHHHHCCCEEEE
Confidence 432 235678889999999999999982 12367889999999999754
No 323
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.50 E-value=1.2e-15 Score=140.60 Aligned_cols=136 Identities=19% Similarity=0.133 Sum_probs=105.0
Q ss_pred CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCCCCCCCccEEEEccccc
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKTYPENSFDVIYSRDTIL 360 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~ 360 (485)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ .+++++++|+.+.+ ++++||+|++..+++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 6789999999999999999987 6899999999999999999886444 47999999998876 567999999999999
Q ss_pred ccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEE
Q 043471 361 HIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDII 428 (485)
Q Consensus 361 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 428 (485)
+..+....+.+++++|+|||.+++........... ..-....+.+.+..++...|...+.
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~--------~~lp~~~~~~~~~~~l~~~g~~~i~ 215 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFRLSKKITNNIV--------YFLPRNADIDQVASLAGPGGQVEIE 215 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHHHHHHHCSCEE--------EEEETTBCHHHHHHTTCTTCCEEEE
T ss_pred CcchhhhHHHHHHhhcCCcceeHHHHHHhhCCceE--------EECCCCCCHHHHHHHhccCCCEEEE
Confidence 98877778889999999999966552211000000 0001234567788888887766554
No 324
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.50 E-value=8.2e-14 Score=125.95 Aligned_cols=115 Identities=20% Similarity=0.244 Sum_probs=82.2
Q ss_pred hhhHHHhccCC---CCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCC
Q 043471 41 EERPEVLSLLP---PYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDL 114 (485)
Q Consensus 41 ~~~~~~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~ 114 (485)
.....+++.+. ..+|.+|||+|||+|..+..+++. ..+|+|+|+|+.|++...+......|+.++++|+..+..
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~ 139 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQS 139 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGG
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchh
Confidence 33455655554 778999999999999999999986 349999999998864333222112589999999986421
Q ss_pred -CCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 115 -TFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 115 -~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
....++||+|++..+. ++. ...+...+.+.|||||.++++.
T Consensus 140 ~~~~~~~~D~I~~d~a~---~~~-~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 140 YKSVVENVDVLYVDIAQ---PDQ-TDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp TTTTCCCEEEEEECCCC---TTH-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccccceEEEEecCCC---hhH-HHHHHHHHHHhCCCCeEEEEEE
Confidence 1224689999998543 331 2334556666999999999973
No 325
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.50 E-value=3.6e-14 Score=137.62 Aligned_cols=116 Identities=20% Similarity=0.271 Sum_probs=97.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~ 348 (485)
.....+++.+...++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+..+.+..+|+.+.+ ++
T Consensus 183 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~ 260 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KG 260 (343)
T ss_dssp HHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CS
T ss_pred HHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cC
Confidence 456677777766667899999999999999999885 369999999999999999998655555778888887653 67
Q ss_pred CccEEEEcccccc-----cCCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 349 SFDVIYSRDTILH-----IQDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 349 ~fD~i~~~~~~~~-----~~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
+||+|+++.++++ ..+...+++++.++|||||.+++...
T Consensus 261 ~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 8999999999875 24578899999999999999999854
No 326
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.49 E-value=2.8e-14 Score=132.28 Aligned_cols=120 Identities=17% Similarity=0.233 Sum_probs=96.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCCCCCCCCCeeEEEhhhhh
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPDLTFSEDSVDMMFSNWLL 130 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~ 130 (485)
..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++....+ .+++.++|+.+. +++++||+|+++...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~---~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA---LPFGPFDLLVANLYA 194 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH---GGGCCEEEEEEECCH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc---CcCCCCCEEEECCcH
Confidence 3567899999999999999999998899999999999999998753212 289999998762 346789999997544
Q ss_pred hccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 131 MYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
++ ...++.++.++|+|||+++++..... ..+.+...+++.||..
T Consensus 195 ~~-----~~~~l~~~~~~LkpgG~lils~~~~~---------------~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 195 EL-----HAALAPRYREALVPGGRALLTGILKD---------------RAPLVREAMAGAGFRP 238 (254)
T ss_dssp HH-----HHHHHHHHHHHEEEEEEEEEEEEEGG---------------GHHHHHHHHHHTTCEE
T ss_pred HH-----HHHHHHHHHHHcCCCCEEEEEeeccC---------------CHHHHHHHHHHCCCEE
Confidence 32 45799999999999999999765321 3567888899988854
No 327
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.49 E-value=2e-14 Score=131.46 Aligned_cols=118 Identities=18% Similarity=0.247 Sum_probs=91.2
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHh--hcCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAK--KAGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPD 113 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~ 113 (485)
.......+...+...++.+|||||||+|..+..+++ .+.+|+|+|+|+.+++.|+++... .++++++++|+.+.
T Consensus 56 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 134 (232)
T 3ntv_A 56 DRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ- 134 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC-
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH-
Confidence 344444444444556788999999999999999998 467999999999999999987532 24899999999763
Q ss_pred CC-CCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 114 LT-FSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 114 ~~-~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
++ ..+++||+|++... ... ...+++++.++|+|||++++.+...
T Consensus 135 ~~~~~~~~fD~V~~~~~---~~~--~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 135 FENVNDKVYDMIFIDAA---KAQ--SKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp HHHHTTSCEEEEEEETT---SSS--HHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred HHhhccCCccEEEEcCc---HHH--HHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 22 23689999997643 222 5679999999999999998865543
No 328
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.49 E-value=4.3e-14 Score=128.31 Aligned_cols=107 Identities=13% Similarity=0.165 Sum_probs=87.6
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCC-C-CC----CCCc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKK-T-YP----ENSF 350 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~-~-~~----~~~f 350 (485)
..++.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++. ++..+++++.+|+.+. + ++ .++|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 3467799999999999999999864 5799999999999999999876 4445799999997542 2 11 2689
Q ss_pred cEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 351 DVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 351 D~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
|+|++....++..+...+++.+ ++|||||.+++.+..
T Consensus 136 D~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 136 DMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp SEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 9999988777776666778888 999999999998654
No 329
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.49 E-value=9.5e-14 Score=130.72 Aligned_cols=112 Identities=16% Similarity=0.115 Sum_probs=88.0
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeC-ChHHHHHHHHHc-----CCC-------CCeEEEEeecc
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDF-IDSVIKKNEEVN-----GHF-------ENVKFMCADVT 110 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~-s~~~~~~a~~~~-----~~~-------~~~~~~~~d~~ 110 (485)
.+++.....++.+|||||||+|.++..+++.+. +|+|+|+ |+.+++.|+++. ... +++++...++.
T Consensus 70 ~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~ 149 (281)
T 3bzb_A 70 TLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWG 149 (281)
T ss_dssp HHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTT
T ss_pred HHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCC
Confidence 344444445778999999999999999999877 8999999 899999999876 321 36888877765
Q ss_pred CCCCCC----CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcc---c--CcEEEEE
Q 043471 111 SPDLTF----SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLK---V--GGYIFFR 158 (485)
Q Consensus 111 ~~~~~~----~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~---p--gG~l~~~ 158 (485)
+....+ ++++||+|++..+++|.++ ...+++.+.++|+ | ||.+++.
T Consensus 150 ~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 150 DSPDSLQRCTGLQRFQVVLLADLLSFHQA--HDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp SCTHHHHHHHSCSSBSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CccHHHHhhccCCCCCEEEEeCcccChHH--HHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 521111 3578999999999999776 6799999999999 9 9988774
No 330
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.49 E-value=9.7e-14 Score=133.59 Aligned_cols=108 Identities=26% Similarity=0.324 Sum_probs=89.2
Q ss_pred HHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCccEEE
Q 043471 277 AKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSFDVIY 354 (485)
Q Consensus 277 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~fD~i~ 354 (485)
+.+...++.+|||||||+|.++..+++....+|+|+|+| .+++.|++++. ++..+++++.+|+.++++++++||+|+
T Consensus 32 ~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 110 (328)
T 1g6q_1 32 QNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIII 110 (328)
T ss_dssp HHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEE
T ss_pred hhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEE
Confidence 333445678999999999999999998733499999999 59999998875 444679999999999888778999999
Q ss_pred Ecccc---cccCCHHHHHHHHHhcCCCCcEEEEE
Q 043471 355 SRDTI---LHIQDKPALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 355 ~~~~~---~~~~~~~~~l~~~~~~LkpgG~l~i~ 385 (485)
+..+. .+...+..+++++.++|||||+++..
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 97543 34467889999999999999999743
No 331
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.49 E-value=6.3e-14 Score=128.52 Aligned_cols=112 Identities=16% Similarity=0.236 Sum_probs=91.4
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc-CcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA-GHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLT 115 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~ 115 (485)
.+.....+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+++.+++.|+++... ..+++++.+|+. .+
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~ 152 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS---KG 152 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG---GC
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc---cC
Confidence 34455677777778888999999999999999999986 8999999999999999987532 247999999973 23
Q ss_pred CCC-CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 116 FSE-DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 116 ~~~-~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+++ ..||+|++..+++++.+ ++.+.|+|||.+++....
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred CCCCCCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEec
Confidence 333 35999999998888874 578899999999997653
No 332
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=1.6e-13 Score=127.66 Aligned_cols=133 Identities=20% Similarity=0.177 Sum_probs=104.3
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTS 111 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~ 111 (485)
........+++.+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++... .+++++.++|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 80 TYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE 159 (258)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG
T ss_pred ccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh
Confidence 33444457788888888999999999999999999988 57999999999999999987522 3689999999987
Q ss_pred CCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcc
Q 043471 112 PDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQ 191 (485)
Q Consensus 112 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (485)
.++++++||+|++. .++ ...+++++.++|+|||.+++..+... ........+++.|
T Consensus 160 --~~~~~~~~D~v~~~-----~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~---------------~~~~~~~~l~~~g 215 (258)
T 2pwy_A 160 --AELEEAAYDGVALD-----LME--PWKVLEKAALALKPDRFLVAYLPNIT---------------QVLELVRAAEAHP 215 (258)
T ss_dssp --CCCCTTCEEEEEEE-----SSC--GGGGHHHHHHHEEEEEEEEEEESCHH---------------HHHHHHHHHTTTT
T ss_pred --cCCCCCCcCEEEEC-----CcC--HHHHHHHHHHhCCCCCEEEEEeCCHH---------------HHHHHHHHHHHCC
Confidence 44567899999983 344 34799999999999999999765321 2234555666777
Q ss_pred eec
Q 043471 192 IQD 194 (485)
Q Consensus 192 ~~~ 194 (485)
|..
T Consensus 216 f~~ 218 (258)
T 2pwy_A 216 FRL 218 (258)
T ss_dssp EEE
T ss_pred Cce
Confidence 754
No 333
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.48 E-value=1.8e-13 Score=124.65 Aligned_cols=111 Identities=23% Similarity=0.261 Sum_probs=92.1
Q ss_pred HHHHHHHHcC--CCCCCEEEEECCCCChhHHHHhhcCC--CEEEEEeCCHHHHHHHHHHhcCC------CCCeEEEEccC
Q 043471 271 TTKEFVAKLD--LKPGQKVLDVGCGIGGGDFYMADKFD--VHVVGIDLSINMISFALERAIGL------KCSVEFEVADC 340 (485)
Q Consensus 271 ~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~~------~~~i~~~~~d~ 340 (485)
....+++.+. +.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++... ..++++..+|+
T Consensus 63 ~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 63 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp HHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 4446666664 77889999999999999999998753 69999999999999999887532 23799999998
Q ss_pred CCCCCCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 341 TKKTYPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 341 ~~~~~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
...+.++++||+|++..+++++. +++.++|||||++++...
T Consensus 143 ~~~~~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 143 RMGYAEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp GGCCGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred ccCcccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEe
Confidence 87655567899999999887764 688999999999999854
No 334
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.48 E-value=8.2e-14 Score=129.01 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=90.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhc--C-CCEEEEEeCCHHHHHHHHHHhcCC---CC--C----------
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADK--F-DVHVVGIDLSINMISFALERAIGL---KC--S---------- 332 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~-~~~v~g~D~s~~~~~~a~~~~~~~---~~--~---------- 332 (485)
.+..+++.+...++.+|||+|||+|.++..+++. . +.+|+|+|+|+.+++.|++++... +. +
T Consensus 39 l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (250)
T 1o9g_A 39 IFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSER 118 (250)
T ss_dssp HHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhh
Confidence 3444555554446779999999999999999886 3 569999999999999999887643 11 2
Q ss_pred ---------------eE-------------EEEccCCCCCC-----CCCCccEEEEcccccccCC---------HHHHHH
Q 043471 333 ---------------VE-------------FEVADCTKKTY-----PENSFDVIYSRDTILHIQD---------KPALFK 370 (485)
Q Consensus 333 ---------------i~-------------~~~~d~~~~~~-----~~~~fD~i~~~~~~~~~~~---------~~~~l~ 370 (485)
++ +.++|+.+... ...+||+|+++..+.+..+ ...+++
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~ 198 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR 198 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH
Confidence 66 99999877421 3458999999987766543 348999
Q ss_pred HHHhcCCCCcEEEEEec
Q 043471 371 SFFKWLKPGGTVLISDY 387 (485)
Q Consensus 371 ~~~~~LkpgG~l~i~~~ 387 (485)
++.++|+|||++++...
T Consensus 199 ~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 199 SLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHSCTTCEEEEEES
T ss_pred HHHHhcCCCcEEEEeCc
Confidence 99999999999999643
No 335
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.48 E-value=5.8e-14 Score=130.03 Aligned_cols=116 Identities=17% Similarity=0.159 Sum_probs=88.6
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhh----cCcEEEEeCChHHHHHHHHHcCCC---C---C------------
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK----AGHVIALDFIDSVIKKNEEVNGHF---E---N------------ 101 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~~~~a~~~~~~~---~---~------------ 101 (485)
..+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.... + +
T Consensus 41 ~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
T 1o9g_A 41 QRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFG 120 (250)
T ss_dssp HHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcc
Confidence 44555555556789999999999999999887 569999999999999999765432 1 1
Q ss_pred -------------eE-------------EEEeeccCCCCCC----CCCCeeEEEhhhhhhccCh-------HHHHHHHHH
Q 043471 102 -------------VK-------------FMCADVTSPDLTF----SEDSVDMMFSNWLLMYLSD-------KEVEKLAER 144 (485)
Q Consensus 102 -------------~~-------------~~~~d~~~~~~~~----~~~~~D~v~~~~~~~~~~~-------~~~~~~l~~ 144 (485)
++ ++++|+.+. .+. ..++||+|+|+..+.+... .....++++
T Consensus 121 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~ 199 (250)
T 1o9g_A 121 KPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDP-RALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRS 199 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCG-GGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhccccccccccceeecccccc-cccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHH
Confidence 66 999998762 111 3348999999866554432 446789999
Q ss_pred HHhhcccCcEEEEEec
Q 043471 145 MVKWLKVGGYIFFRES 160 (485)
Q Consensus 145 ~~~~L~pgG~l~~~~~ 160 (485)
+.++|+|||++++...
T Consensus 200 ~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 200 LASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHSCTTCEEEEEES
T ss_pred HHHhcCCCcEEEEeCc
Confidence 9999999999999543
No 336
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.48 E-value=4.1e-14 Score=123.56 Aligned_cols=107 Identities=21% Similarity=0.304 Sum_probs=89.7
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCC----
Q 043471 272 TKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKT---- 344 (485)
Q Consensus 272 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~---- 344 (485)
...+++.+. +.++.+|||+|||+|.++..+++.+ +.+++|+|+++ +++. .++++..+|+.+.+
T Consensus 10 l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 10 LDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp HHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHH
T ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhh
Confidence 445566654 6788899999999999999999885 47999999999 7532 37899999998876
Q ss_pred ----CCCCCccEEEEcccccccCCH-----------HHHHHHHHhcCCCCcEEEEEecc
Q 043471 345 ----YPENSFDVIYSRDTILHIQDK-----------PALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 345 ----~~~~~fD~i~~~~~~~~~~~~-----------~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+++++||+|++..++++..+. ..+++++.++|+|||.+++..+.
T Consensus 80 ~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 80 LLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred hhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 667899999999998887765 78999999999999999998653
No 337
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.48 E-value=1.1e-13 Score=126.89 Aligned_cols=112 Identities=23% Similarity=0.347 Sum_probs=93.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCC-
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPE- 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~- 347 (485)
.....+++.+.+.++.+|||+|||+|.++..+++..+.+|+++|+++.+++.|++++...+ .++++..+|+ ..++++
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~ 156 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPK 156 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCC
Confidence 4566777888888999999999999999999998854799999999999999999876433 3689999997 334444
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
.+||+|++..+++++. +++.++|||||++++....
T Consensus 157 ~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred CCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEec
Confidence 3599999999998876 4789999999999998653
No 338
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.48 E-value=3.2e-14 Score=139.99 Aligned_cols=118 Identities=19% Similarity=0.240 Sum_probs=91.9
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cC-cEEEEeCChHHHHHH-------HHHcC--C--CCCeEEEE
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AG-HVIALDFIDSVIKKN-------EEVNG--H--FENVKFMC 106 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~-~v~giD~s~~~~~~a-------~~~~~--~--~~~~~~~~ 106 (485)
......+++.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.| ++++. . ..++++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 455677888888888999999999999999999986 43 799999999999888 66542 1 25899998
Q ss_pred eeccCCCCCC--CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 107 ADVTSPDLTF--SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 107 ~d~~~~~~~~--~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+|......++ ..++||+|+++.++ +.++ ...+++++.++|||||.+++.+.
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d--~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDED--LNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHH--HHHHHHHHHTTCCTTCEEEESSC
T ss_pred cCccccccccccccCCCCEEEEeCcc-cccc--HHHHHHHHHHhCCCCeEEEEeec
Confidence 8644211112 24689999987665 3333 66889999999999999999654
No 339
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.47 E-value=4.3e-13 Score=123.98 Aligned_cols=112 Identities=19% Similarity=0.188 Sum_probs=95.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~~~~~ 347 (485)
.....++..+.+.++.+|||+|||+|.++..+++. +.+++++|+++.+++.|+++... ...++++..+|+.+..+++
T Consensus 78 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 78 KDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPE 156 (248)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCT
T ss_pred hhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCC
Confidence 34457778888889999999999999999999988 78999999999999999998753 3357999999998754356
Q ss_pred CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 348 NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
++||+|++ +.+++..+++++.++|+|||++++...
T Consensus 157 ~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 157 GIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 78999998 456788999999999999999999854
No 340
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.47 E-value=5e-14 Score=136.65 Aligned_cols=115 Identities=20% Similarity=0.219 Sum_probs=93.4
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCCC-CCeEEEEeeccCCCCCCCC
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGHF-ENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~ 118 (485)
..+.+++.+....+.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++.... ..++++.+|+... .+
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~----~~ 259 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE----VK 259 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT----CC
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc----cc
Confidence 35667777766667899999999999999999986 48999999999999999875322 2467888888652 36
Q ss_pred CCeeEEEhhhhhhcc---ChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 119 DSVDMMFSNWLLMYL---SDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
++||+|+++..+|+. ......++++++.++|+|||.+++...
T Consensus 260 ~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 260 GRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 799999999888763 233467999999999999999999754
No 341
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.47 E-value=1.6e-13 Score=128.61 Aligned_cols=96 Identities=25% Similarity=0.354 Sum_probs=83.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLL 130 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~ 130 (485)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++. +++.+.++|+.. +++++++||+|+++.+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~--~~~~~~~fD~v~~~~~~ 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---PQVTFCVASSHR--LPFSDTSMDAIIRIYAP 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---TTSEEEECCTTS--CSBCTTCEEEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcchhh--CCCCCCceeEEEEeCCh
Confidence 46789999999999999999987 779999999999999999875 578999999987 66778899999986542
Q ss_pred hccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 131 MYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
..++++.++|+|||.+++..+..
T Consensus 159 ---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 35789999999999999987654
No 342
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.47 E-value=9.9e-14 Score=124.53 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=86.6
Q ss_pred hhHHHhccCCCC---CCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCC
Q 043471 42 ERPEVLSLLPPY---EGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDL 114 (485)
Q Consensus 42 ~~~~~~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~ 114 (485)
..+.+++.+... ++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++... ..+++++++|+.+..
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 128 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP- 128 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-
Confidence 344555544322 4789999999999999999987 67999999999999999986532 246999999998742
Q ss_pred CCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 115 TFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 115 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
+.++||+|+++.. .+ ...+++++.++|+|||.+++..
T Consensus 129 --~~~~~D~i~~~~~----~~--~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 129 --SEPPFDGVISRAF----AS--LNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp --CCSCEEEEECSCS----SS--HHHHHHHHTTSEEEEEEEEEEE
T ss_pred --ccCCcCEEEEecc----CC--HHHHHHHHHHhcCCCcEEEEEe
Confidence 4578999998642 33 5689999999999999999963
No 343
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.47 E-value=2.1e-13 Score=130.37 Aligned_cols=139 Identities=21% Similarity=0.169 Sum_probs=104.2
Q ss_pred HHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCCCCcc
Q 043471 275 FVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPENSFD 351 (485)
Q Consensus 275 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~fD 351 (485)
+...+...++.+|||+|||+|..+..+++.. +.+|+|+|+|+.+++.+++++...+ .+++++++|+..++..+++||
T Consensus 110 ~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 110 PPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp HHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEE
T ss_pred HHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCC
Confidence 3445577889999999999999999999875 3699999999999999999886433 279999999988754457899
Q ss_pred EEEEcc------cccccCC----------------HHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCC
Q 043471 352 VIYSRD------TILHIQD----------------KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDL 409 (485)
Q Consensus 352 ~i~~~~------~~~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (485)
+|++.. ++.+.++ ...+|+++.++|||||++++++..... .
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~-----------------~ 252 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP-----------------E 252 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG-----------------G
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh-----------------H
Confidence 999842 2332222 158899999999999999998643211 1
Q ss_pred CCHHHHHHHHHhCCCeEEEEe
Q 043471 410 HDVKSYGQMLKDAGFVDIIAE 430 (485)
Q Consensus 410 ~~~~~~~~~l~~aGf~~~~~~ 430 (485)
.....+...+++.||+.+.+.
T Consensus 253 Ene~~v~~~l~~~~~~~~~~~ 273 (315)
T 1ixk_A 253 ENEFVIQWALDNFDVELLPLK 273 (315)
T ss_dssp GTHHHHHHHHHHSSEEEECCC
T ss_pred HhHHHHHHHHhcCCCEEecCC
Confidence 123456777888898876543
No 344
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.47 E-value=9.3e-14 Score=135.41 Aligned_cols=134 Identities=14% Similarity=0.229 Sum_probs=104.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhh
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWL 129 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~ 129 (485)
..++.+|||||||+|.++..++++ +.+|+++|+ +.+++.|++. ++++++.+|+.+ ++ + .||+|++..+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~~--p--~~D~v~~~~~ 255 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----NNLTYVGGDMFT-SI--P--NADAVLLKYI 255 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----TTEEEEECCTTT-CC--C--CCSEEEEESC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----CCcEEEeccccC-CC--C--CccEEEeehh
Confidence 345689999999999999999987 568999999 9999887652 469999999865 33 3 3999999999
Q ss_pred hhccChHHHHHHHHHHHhhccc---CcEEEEEeccCCCCCcc-----c----cC---CCCCCCCChhHHHHHhhhcceec
Q 043471 130 LMYLSDKEVEKLAERMVKWLKV---GGYIFFRESCFHQSGDS-----K----RK---HNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 130 ~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~-----~----~~---~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
+||++++...+++++++++|+| ||++++.+......... . +. ......++.+.|.++++++||..
T Consensus 256 lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~ 335 (352)
T 1fp2_A 256 LHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQH 335 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCE
T ss_pred hccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCe
Confidence 9999987677999999999999 99999988765432211 0 00 01122246788999999999854
Q ss_pred C
Q 043471 195 A 195 (485)
Q Consensus 195 ~ 195 (485)
.
T Consensus 336 ~ 336 (352)
T 1fp2_A 336 Y 336 (352)
T ss_dssp E
T ss_pred e
Confidence 3
No 345
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=1.3e-13 Score=127.46 Aligned_cols=114 Identities=18% Similarity=0.342 Sum_probs=90.8
Q ss_pred HHHHHHc-CCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCC-CCC
Q 043471 273 KEFVAKL-DLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKK-TYP 346 (485)
Q Consensus 273 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~-~~~ 346 (485)
..++..+ ...++.+|||||||+|..+..+++.+ +.+|+++|+|+.+++.|++++. ++..++++..+|+.+. +..
T Consensus 52 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~ 131 (248)
T 3tfw_A 52 GQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL 131 (248)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC
T ss_pred HHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc
Confidence 3344433 34567899999999999999999886 5799999999999999999886 4445799999998652 222
Q ss_pred --CCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 347 --ENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 347 --~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
.++||+|++... ..+...+++++.++|||||.+++.+...
T Consensus 132 ~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 132 GECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp CSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred CCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 348999998653 3467789999999999999999986544
No 346
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.47 E-value=2.2e-14 Score=126.56 Aligned_cols=124 Identities=12% Similarity=0.119 Sum_probs=92.8
Q ss_pred CccChhhhHHHhccCC-CCCCCcEEEEcCCCCcchHHHHhhc-CcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeecc
Q 043471 36 SDLDKEERPEVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKA-GHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVT 110 (485)
Q Consensus 36 ~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~ 110 (485)
.......+..+++.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++... .++++++++|+.
T Consensus 25 rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 104 (187)
T 2fhp_A 25 RPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN 104 (187)
T ss_dssp CCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHH
Confidence 3344556666676664 3568899999999999999988875 5999999999999999987532 247999999987
Q ss_pred CCC--CCCCCCCeeEEEhhhhhhccChHHHHHHHHHH--HhhcccCcEEEEEeccC
Q 043471 111 SPD--LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERM--VKWLKVGGYIFFRESCF 162 (485)
Q Consensus 111 ~~~--~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~--~~~L~pgG~l~~~~~~~ 162 (485)
+.. +++++++||+|+++..++ ... ....++.+ .++|+|||.+++.....
T Consensus 105 ~~~~~~~~~~~~fD~i~~~~~~~-~~~--~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 105 RALEQFYEEKLQFDLVLLDPPYA-KQE--IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHHHTTCCEEEEEECCCGG-GCC--HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHHHhcCCCCCEEEECCCCC-chh--HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 631 112267899999987644 232 34566666 88999999999976543
No 347
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.47 E-value=7.5e-14 Score=128.77 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=83.4
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCC-CCCCCeeEEE
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLT-FSEDSVDMMF 125 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~-~~~~~~D~v~ 125 (485)
...++.+|||||||+|..++.++.. +.+|+|+|+|+.+++.|+++... ..+++++++|+++.... ..+++||+|+
T Consensus 77 ~~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 77 LWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred ccCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 3456889999999999999999987 57999999999999999987532 24799999999874321 1247999999
Q ss_pred hhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 126 SNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
|..+ .+ ...+++.+.++|+|||++++..
T Consensus 157 s~a~----~~--~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 157 ARAV----AP--LCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EESS----CC--HHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCc----CC--HHHHHHHHHHHcCCCeEEEEEe
Confidence 9653 33 5689999999999999988754
No 348
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.47 E-value=4.7e-14 Score=141.99 Aligned_cols=112 Identities=18% Similarity=0.247 Sum_probs=91.8
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCCCC
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~~~ 118 (485)
.+.+++.+...++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|+++.. ..++++++.+|+.+.+ ++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~~- 222 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--LP- 222 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--CS-
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--cC-
Confidence 34566666666788999999999999999998854 999999998 9988887643 2257999999998843 33
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
++||+|+++.+++|...+.....+.++.++|+|||.+++.
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5899999998888887655677888999999999999864
No 349
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=1.6e-13 Score=125.01 Aligned_cols=110 Identities=22% Similarity=0.275 Sum_probs=88.7
Q ss_pred hhHHHhccCC--CCCCCcEEEEcCCCCcchHHHHhh-c--CcEEEEeCChHHHHHHHHHcCC-------CCCeEEEEeec
Q 043471 42 ERPEVLSLLP--PYEGKTVLEFGAGIGRFTGELAKK-A--GHVIALDFIDSVIKKNEEVNGH-------FENVKFMCADV 109 (485)
Q Consensus 42 ~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~~~~a~~~~~~-------~~~~~~~~~d~ 109 (485)
....+++.+. ..++.+|||||||+|..+..+++. + .+|+|+|+|+.+++.++++... .++++++++|+
T Consensus 63 ~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 63 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp HHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 3345666665 567889999999999999999987 4 5899999999999999886532 35899999999
Q ss_pred cCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 110 TSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 110 ~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
.. .+..+++||+|++...++++. +++.++|+|||.+++....
T Consensus 143 ~~--~~~~~~~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 143 RM--GYAEEAPYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GG--CCGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred cc--CcccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 76 333467899999988776664 4688999999999997553
No 350
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.46 E-value=2.1e-13 Score=124.82 Aligned_cols=113 Identities=19% Similarity=0.326 Sum_probs=92.1
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCC-CCC--
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKK-TYP-- 346 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~-~~~-- 346 (485)
..+...+...++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|++++.. ...++++..+|+.+. +..
T Consensus 44 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 123 (233)
T 2gpy_A 44 ESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLEL 123 (233)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTT
T ss_pred HHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhccc
Confidence 333344445577899999999999999999886 57999999999999999998763 335799999998774 322
Q ss_pred CCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 347 ENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+++||+|++.... .+...+++++.++|+|||++++.+..
T Consensus 124 ~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 124 YPLFDVLFIDAAK---GQYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp SCCEEEEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CCCccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 4789999997764 37889999999999999999998654
No 351
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.46 E-value=1.4e-13 Score=125.38 Aligned_cols=111 Identities=22% Similarity=0.267 Sum_probs=92.3
Q ss_pred HHHHHHHHc--CCCCCCEEEEECCCCChhHHHHhhcCC------CEEEEEeCCHHHHHHHHHHhcCC------CCCeEEE
Q 043471 271 TTKEFVAKL--DLKPGQKVLDVGCGIGGGDFYMADKFD------VHVVGIDLSINMISFALERAIGL------KCSVEFE 336 (485)
Q Consensus 271 ~~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~v~g~D~s~~~~~~a~~~~~~~------~~~i~~~ 336 (485)
....+++.+ .+.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++... ..++++.
T Consensus 66 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 145 (227)
T 2pbf_A 66 MHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKII 145 (227)
T ss_dssp HHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEE
Confidence 444556666 477889999999999999999998754 59999999999999999987633 2479999
Q ss_pred EccCCCCC----CCCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 337 VADCTKKT----YPENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 337 ~~d~~~~~----~~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
.+|+.+.. ...++||+|++..+++++ ++++.++|||||++++...
T Consensus 146 ~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 146 HKNIYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp ECCGGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEE
T ss_pred ECChHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEc
Confidence 99998754 456789999999998876 3788999999999999854
No 352
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=1.5e-13 Score=127.85 Aligned_cols=114 Identities=14% Similarity=0.137 Sum_probs=87.9
Q ss_pred HhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCC---CC---CeEEEEeeccCCC----
Q 043471 46 VLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGH---FE---NVKFMCADVTSPD---- 113 (485)
Q Consensus 46 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~---~~---~~~~~~~d~~~~~---- 113 (485)
+...+...++.+|||+|||+|.+++.++++. .+|+|+|+++.+++.|+++... .+ +++++++|+.+..
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV 107 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh
Confidence 3445556678899999999999999999984 6899999999999999998654 22 5999999998741
Q ss_pred -CCCCCCCeeEEEhhhhhh----------------ccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 114 -LTFSEDSVDMMFSNWLLM----------------YLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 114 -~~~~~~~~D~v~~~~~~~----------------~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
..+++++||+|+++-.+. |........+++.+.++|+|||.+++..
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 024578999999973221 1112226789999999999999999853
No 353
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.46 E-value=3.3e-14 Score=129.08 Aligned_cols=119 Identities=14% Similarity=0.195 Sum_probs=89.1
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSP 112 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~ 112 (485)
.......+...+...++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|+++.. ..++++++++|+.+.
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 43 GDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL 122 (221)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH
Confidence 3333333333344456789999999999999999984 6799999999999999998643 223699999998552
Q ss_pred CCC-C----CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 113 DLT-F----SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 113 ~~~-~----~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++ + ..++||+|++....++..+ ...++..+ ++|+|||++++.+..
T Consensus 123 -l~~~~~~~~~~~fD~V~~d~~~~~~~~--~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 123 -IPQLKKKYDVDTLDMVFLDHWKDRYLP--DTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp -GGGTTTTSCCCCCSEEEECSCGGGHHH--HHHHHHHT-TCCCTTCEEEESCCC
T ss_pred -HHHHHHhcCCCceEEEEEcCCcccchH--HHHHHHhc-cccCCCeEEEEeCCC
Confidence 11 1 1268999999876666654 44677777 999999999996554
No 354
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.46 E-value=2.3e-13 Score=127.89 Aligned_cols=133 Identities=16% Similarity=0.140 Sum_probs=98.3
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCC
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTF 116 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~ 116 (485)
..+..+.+.+ .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++.. ...+++++++|+.+.. .
T Consensus 114 ~~~~~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~--~ 189 (278)
T 2frn_A 114 KERVRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--G 189 (278)
T ss_dssp HHHHHHHHHC--CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--C
T ss_pred HHHHHHHHhC--CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc--c
Confidence 3445555553 3578999999999999999999987 59999999999999998643 2235999999998843 2
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhccee
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQ 193 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (485)
+++||+|+++.. .. ...++.++.++|+|||++++.+...... ......+.+...+++.|+.
T Consensus 190 -~~~fD~Vi~~~p----~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~---------~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 190 -ENIADRILMGYV----VR--THEFIPKALSIAKDGAIIHYHNTVPEKL---------MPREPFETFKRITKEYGYD 250 (278)
T ss_dssp -CSCEEEEEECCC----SS--GGGGHHHHHHHEEEEEEEEEEEEEEGGG---------TTTTTHHHHHHHHHHTTCE
T ss_pred -cCCccEEEECCc----hh--HHHHHHHHHHHCCCCeEEEEEEeecccc---------ccccHHHHHHHHHHHcCCe
Confidence 679999998632 12 2478999999999999999976653110 0011345667777777763
No 355
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.46 E-value=1.1e-14 Score=124.86 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=82.3
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCCC---CeEEEEeeccCCCCCCCCC
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHFE---NVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 119 (485)
.+...+ .++.+|||+|||+|.++..++.. +.+|+|+|+|+.|++.++++....+ ++.+ +|.... .+.+
T Consensus 42 ~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---~~~~ 114 (200)
T 3fzg_A 42 YVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---VYKG 114 (200)
T ss_dssp HHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH---HTTS
T ss_pred HHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc---CCCC
Confidence 334445 34779999999999999999776 6699999999999999999864322 4555 665432 3568
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEE
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
+||+|++..++|++++ .+..+.++++.|+|||.++--
T Consensus 115 ~~DvVLa~k~LHlL~~--~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 115 TYDVVFLLKMLPVLKQ--QDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp EEEEEEEETCHHHHHH--TTCCHHHHHHTCEEEEEEEEE
T ss_pred CcChhhHhhHHHhhhh--hHHHHHHHHHHhCCCCEEEEe
Confidence 8999999999999943 567888999999999976553
No 356
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.46 E-value=1.1e-13 Score=132.89 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=86.2
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCC------CCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccC
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAG------IGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTS 111 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG------~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~ 111 (485)
+..+.+++.+. .++.+||||||| +|..+..++++ +.+|+|+|+|++|. ...++++|+++|+.+
T Consensus 204 ~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~~~rI~fv~GDa~d 275 (419)
T 3sso_A 204 PHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VDELRIRTIQGDQND 275 (419)
T ss_dssp HHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GCBTTEEEEECCTTC
T ss_pred HHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hcCCCcEEEEecccc
Confidence 45556666554 346899999999 78888777765 57999999999983 123689999999988
Q ss_pred CCCCCC------CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 112 PDLTFS------EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 112 ~~~~~~------~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
+++. +++||+|++..+ ++..+ ...+|++++++|||||++++.+...
T Consensus 276 --lpf~~~l~~~d~sFDlVisdgs-H~~~d--~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 276 --AEFLDRIARRYGPFDIVIDDGS-HINAH--VRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp --HHHHHHHHHHHCCEEEEEECSC-CCHHH--HHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred --cchhhhhhcccCCccEEEECCc-ccchh--HHHHHHHHHHhcCCCeEEEEEeccc
Confidence 5555 689999998754 55554 6799999999999999999987763
No 357
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.46 E-value=1.5e-13 Score=125.37 Aligned_cols=111 Identities=20% Similarity=0.275 Sum_probs=92.4
Q ss_pred HHHHHHHHHc--CCCCCCEEEEECCCCChhHHHHhhcCC-------CEEEEEeCCHHHHHHHHHHhcCC------CCCeE
Q 043471 270 ETTKEFVAKL--DLKPGQKVLDVGCGIGGGDFYMADKFD-------VHVVGIDLSINMISFALERAIGL------KCSVE 334 (485)
Q Consensus 270 ~~~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~-------~~v~g~D~s~~~~~~a~~~~~~~------~~~i~ 334 (485)
.....+++.+ .+.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++... ..+++
T Consensus 69 ~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 148 (227)
T 1r18_A 69 HMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLL 148 (227)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceE
Confidence 4456677777 477889999999999999999998654 49999999999999999887532 24799
Q ss_pred EEEccCCCCCCCC-CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 335 FEVADCTKKTYPE-NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 335 ~~~~d~~~~~~~~-~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
+..+|+.+ ++++ ++||+|++..+++++. +++.++|||||++++...
T Consensus 149 ~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 149 IVEGDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEESCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred EEECCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 99999887 4444 7899999999998875 789999999999999854
No 358
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.46 E-value=3.1e-14 Score=128.94 Aligned_cols=109 Identities=11% Similarity=0.139 Sum_probs=85.0
Q ss_pred cCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC---C-CCeEEEEeeccCCCCCCCCCCe
Q 043471 49 LLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH---F-ENVKFMCADVTSPDLTFSEDSV 121 (485)
Q Consensus 49 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~---~-~~~~~~~~d~~~~~~~~~~~~~ 121 (485)
..+..++.+|||||||+|..+..+++. +.+|+++|+|+++++.|+++... . ++++++++|+.+..-.+++++|
T Consensus 51 ~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~f 130 (221)
T 3dr5_A 51 TTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSY 130 (221)
T ss_dssp HSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCE
T ss_pred hhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCc
Confidence 334444569999999999999999986 57999999999999999987532 2 4799999998763112336899
Q ss_pred eEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 122 DMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 122 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
|+|++... ... ...+++++.++|+|||++++.+..+
T Consensus 131 D~V~~d~~---~~~--~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 131 QLVFGQVS---PMD--LKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp EEEEECCC---TTT--HHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred CeEEEcCc---HHH--HHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 99998642 222 5679999999999999999965543
No 359
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.46 E-value=1.4e-13 Score=129.82 Aligned_cols=114 Identities=19% Similarity=0.277 Sum_probs=94.4
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC-----CCCeEEEEeecc
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH-----FENVKFMCADVT 110 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~ 110 (485)
.......++..+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++... ..+++++++|+.
T Consensus 84 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 84 YPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred cHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 3445567788888888999999999999999999986 57999999999999999987532 358999999998
Q ss_pred CCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 111 SPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 111 ~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+ .++++++||+|++. .++ ...+++++.++|+|||.+++..++
T Consensus 164 ~--~~~~~~~~D~v~~~-----~~~--~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 164 D--SELPDGSVDRAVLD-----MLA--PWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp G--CCCCTTCEEEEEEE-----SSC--GGGGHHHHHHHEEEEEEEEEEESS
T ss_pred h--cCCCCCceeEEEEC-----CcC--HHHHHHHHHHhCCCCCEEEEEeCC
Confidence 8 44567899999983 334 337999999999999999997654
No 360
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.45 E-value=2.3e-13 Score=122.49 Aligned_cols=103 Identities=19% Similarity=0.253 Sum_probs=85.2
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCC-CCCCCCccEEEEc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKK-TYPENSFDVIYSR 356 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~-~~~~~~fD~i~~~ 356 (485)
.++.+|||||||+|..+..+++.. +.+|+++|+|+.+++.|++++. +...++++..+|..+. +..++ ||+|++.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 356799999999999999999876 5799999999999999998875 3334699999998653 43346 9999987
Q ss_pred ccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 357 DTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 357 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
.. ..+...+++++.++|||||.+++.+..
T Consensus 134 ~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 134 CD---VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp TT---TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred CC---hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 42 457889999999999999999987644
No 361
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.45 E-value=1.2e-13 Score=126.40 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=92.9
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSP 112 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~ 112 (485)
.+......+...+...++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|+++... ..+++++++|+...
T Consensus 38 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 38 MDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred cCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 44455555555555567889999999999999999988 67999999999999999987532 24799999998763
Q ss_pred CCCCC--CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 113 DLTFS--EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 113 ~~~~~--~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++.. +++||+|++..... + ...+++++.++|+|||.+++.+..
T Consensus 118 -~~~~~~~~~fD~I~~~~~~~---~--~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 118 -GEKLELYPLFDVLFIDAAKG---Q--YRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp -HHHHTTSCCEEEEEEEGGGS---C--HHHHHHHHGGGEEEEEEEEEETTT
T ss_pred -HHhcccCCCccEEEECCCHH---H--HHHHHHHHHHHcCCCeEEEEEcCC
Confidence 1222 57899999876543 2 568999999999999999997554
No 362
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.45 E-value=9.3e-14 Score=129.36 Aligned_cols=142 Identities=15% Similarity=0.182 Sum_probs=93.7
Q ss_pred HHHhccCCCC-CCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCCCCeE-EEEeeccCCCC-CCCCC
Q 043471 44 PEVLSLLPPY-EGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHFENVK-FMCADVTSPDL-TFSED 119 (485)
Q Consensus 44 ~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~-~~~~d~~~~~~-~~~~~ 119 (485)
..+++.+... ++.+|||||||||.++..|++.|. +|+|+|+|++|++.+.+.. +++. +...++..... .++..
T Consensus 74 ~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~---~rv~~~~~~ni~~l~~~~l~~~ 150 (291)
T 3hp7_A 74 EKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD---DRVRSMEQYNFRYAEPVDFTEG 150 (291)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC---TTEEEECSCCGGGCCGGGCTTC
T ss_pred HHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---cccceecccCceecchhhCCCC
Confidence 4666766654 577999999999999999999875 8999999999998865432 2332 23345544221 12345
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEec-cCCCCCccccCC----CCC-CCCChhHHHHHhhhccee
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRES-CFHQSGDSKRKH----NPT-HYREPRFYSKVFKECQIQ 193 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~-~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~ 193 (485)
+||+|++..+++++ ..++.+++++|+|||.+++... .+.......... ++. +....+.+..++..+||.
T Consensus 151 ~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~ 225 (291)
T 3hp7_A 151 LPSFASIDVSFISL-----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFS 225 (291)
T ss_dssp CCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCE
Confidence 69999998777655 3699999999999999988621 121111110000 010 111345577778888984
No 363
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.44 E-value=2.8e-14 Score=130.64 Aligned_cols=109 Identities=16% Similarity=0.150 Sum_probs=84.2
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhh------cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCC-CCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK------AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPD-LTF 116 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~ 116 (485)
..+.+.+...++.+|||||||+|..+..|++. +.+|+|+|+|+.|++.|+.. .++++++++|+.+.. ++.
T Consensus 71 ~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~---~~~v~~~~gD~~~~~~l~~ 147 (236)
T 2bm8_A 71 AVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD---MENITLHQGDCSDLTTFEH 147 (236)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG---CTTEEEEECCSSCSGGGGG
T ss_pred HHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc---CCceEEEECcchhHHHHHh
Confidence 33434444445789999999999999999986 67999999999999888732 268999999998731 132
Q ss_pred CC-CCeeEEEhhhhhhccChHHHHHHHHHHHh-hcccCcEEEEEec
Q 043471 117 SE-DSVDMMFSNWLLMYLSDKEVEKLAERMVK-WLKVGGYIFFRES 160 (485)
Q Consensus 117 ~~-~~~D~v~~~~~~~~~~~~~~~~~l~~~~~-~L~pgG~l~~~~~ 160 (485)
.. .+||+|++... |. + ...++.++.+ +|||||++++.+.
T Consensus 148 ~~~~~fD~I~~d~~--~~-~--~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 148 LREMAHPLIFIDNA--HA-N--TFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp GSSSCSSEEEEESS--CS-S--HHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hccCCCCEEEECCc--hH-h--HHHHHHHHHHhhCCCCCEEEEEeC
Confidence 23 47999998654 43 3 5689999997 9999999999754
No 364
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.43 E-value=4.4e-13 Score=119.66 Aligned_cols=107 Identities=23% Similarity=0.328 Sum_probs=83.9
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcCC---CEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCC--
Q 043471 271 TTKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKFD---VHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKT-- 344 (485)
Q Consensus 271 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~---~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~-- 344 (485)
.+.++++.+. ++++.+|||+|||+|.++..++++.+ .+|+|+|+|+.+ . ..++++.++|+.+.+
T Consensus 9 kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~-~~~v~~~~~d~~~~~~~ 78 (201)
T 2plw_A 9 KLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P-IPNVYFIQGEIGKDNMN 78 (201)
T ss_dssp HHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C-CTTCEEEECCTTTTSSC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C-CCCceEEEccccchhhh
Confidence 3445566654 57888999999999999999998863 799999999832 1 236899999998876
Q ss_pred -----------------------CCCCCccEEEEcccccccC----CH-------HHHHHHHHhcCCCCcEEEEEec
Q 043471 345 -----------------------YPENSFDVIYSRDTILHIQ----DK-------PALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 345 -----------------------~~~~~fD~i~~~~~~~~~~----~~-------~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
+++++||+|++..++++.. +. ..+++++.++|||||++++..+
T Consensus 79 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 79 NIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp CC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 5667999999988776642 22 2378999999999999998653
No 365
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.43 E-value=1.1e-13 Score=126.64 Aligned_cols=122 Identities=16% Similarity=0.261 Sum_probs=93.3
Q ss_pred CCCEEEEECCCCChhHHHHhhc---C--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCC---CCCC-CCccEE
Q 043471 283 PGQKVLDVGCGIGGGDFYMADK---F--DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKK---TYPE-NSFDVI 353 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~---~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~---~~~~-~~fD~i 353 (485)
++.+|||||||+|..+..+++. . +.+|+|+|+|+.+++.|+. ...+++++++|+.+. +... .+||+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 4679999999999999999886 2 5799999999999988872 235899999999884 4333 479999
Q ss_pred EEcccccccCCHHHHHHHHHh-cCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhC--CCeEE
Q 043471 354 YSRDTILHIQDKPALFKSFFK-WLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDA--GFVDI 427 (485)
Q Consensus 354 ~~~~~~~~~~~~~~~l~~~~~-~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a--Gf~~~ 427 (485)
++... | .+...+++++.+ +|||||++++.+.. . .... .....+.+.+++. +|++.
T Consensus 157 ~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~~--------~---~~~~-----~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 157 FIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDMI--------P---YWYR-----YAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp EEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSCH--------H---HHHH-----HCHHHHHHHHHTTTTTEEEE
T ss_pred EECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeCc--------c---cccc-----cCHHHHHHHHHhCcccEEEc
Confidence 98665 4 378889999997 99999999998651 1 1111 1234677888887 57653
No 366
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.43 E-value=9.5e-14 Score=121.17 Aligned_cols=106 Identities=20% Similarity=0.220 Sum_probs=84.8
Q ss_pred HHhccCC-CCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCC-----
Q 043471 45 EVLSLLP-PYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLT----- 115 (485)
Q Consensus 45 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~----- 115 (485)
.+++.+. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+ +++. ++++++++|+.+ .+
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------~~~~~~~~d~~~--~~~~~~~ 80 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------VGVDFLQGDFRD--ELVMKAL 80 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------TTEEEEESCTTS--HHHHHHH
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------CcEEEEEccccc--chhhhhh
Confidence 3444444 456789999999999999999987 36999999999 7532 579999999987 33
Q ss_pred ---CCCCCeeEEEhhhhhhccChHH---H------HHHHHHHHhhcccCcEEEEEecc
Q 043471 116 ---FSEDSVDMMFSNWLLMYLSDKE---V------EKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 116 ---~~~~~~D~v~~~~~~~~~~~~~---~------~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+++++||+|+++.++++.+... . ..+++++.++|+|||.+++..+.
T Consensus 81 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 81 LERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred hccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 5678999999988887775421 1 58999999999999999997654
No 367
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.43 E-value=2.9e-13 Score=136.23 Aligned_cols=112 Identities=21% Similarity=0.252 Sum_probs=92.4
Q ss_pred HHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCC
Q 043471 272 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENS 349 (485)
Q Consensus 272 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~ 349 (485)
...+++.+...++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++. ++..+++++.+|+.+++++ ++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~ 224 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQ 224 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SC
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CC
Confidence 345566666667889999999999999999886446999999998 9999998876 4446899999999987765 68
Q ss_pred ccEEEEcccccccC--CHHHHHHHHHhcCCCCcEEEEE
Q 043471 350 FDVIYSRDTILHIQ--DKPALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 350 fD~i~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~ 385 (485)
||+|++..+++|+. +....+.+++++|||||++++.
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999988877774 3466788899999999999864
No 368
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.43 E-value=1.5e-13 Score=125.33 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=87.4
Q ss_pred hHHHhccC--CCCCCCcEEEEcCCCCcchHHHHhhcC-------cEEEEeCChHHHHHHHHHcCC-------CCCeEEEE
Q 043471 43 RPEVLSLL--PPYEGKTVLEFGAGIGRFTGELAKKAG-------HVIALDFIDSVIKKNEEVNGH-------FENVKFMC 106 (485)
Q Consensus 43 ~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~-------~v~giD~s~~~~~~a~~~~~~-------~~~~~~~~ 106 (485)
...+++.+ ...++.+|||||||+|.++..+++... +|+|+|+++.+++.|+++... ..+++++.
T Consensus 67 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 146 (227)
T 2pbf_A 67 HALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIH 146 (227)
T ss_dssp HHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEE
Confidence 34555555 356788999999999999999998753 999999999999999987532 35899999
Q ss_pred eeccCCCCC----CCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 107 ADVTSPDLT----FSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 107 ~d~~~~~~~----~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+|+.. .. ...++||+|++...++++. +++.++|+|||.+++...
T Consensus 147 ~d~~~--~~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 147 KNIYQ--VNEEEKKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIE 194 (227)
T ss_dssp CCGGG--CCHHHHHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEE
T ss_pred CChHh--cccccCccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEc
Confidence 99986 32 3457899999998877664 568899999999999755
No 369
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.43 E-value=6.4e-14 Score=144.89 Aligned_cols=107 Identities=23% Similarity=0.297 Sum_probs=90.0
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCC--CCCCCCccEEEEccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKK--TYPENSFDVIYSRDT 358 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~--~~~~~~fD~i~~~~~ 358 (485)
.++.+|||||||+|.++..|++. |++|+|||+|+.+++.|+..+...+ .+++|.+++++++ ++++++||+|+|.++
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 45679999999999999999988 8999999999999999999886544 4799999999886 456789999999999
Q ss_pred ccccCCHHHH--HHHHHhcCCCCcEEEEEeccc
Q 043471 359 ILHIQDKPAL--FKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 359 ~~~~~~~~~~--l~~~~~~LkpgG~l~i~~~~~ 389 (485)
++|++++..+ +..+.+.|+++|..++.....
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 9999876533 556778899988877765443
No 370
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.42 E-value=4.2e-13 Score=130.78 Aligned_cols=123 Identities=20% Similarity=0.092 Sum_probs=97.3
Q ss_pred CccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc---CcEEEEeCChHHHHHHHHHcCCCC--CeEEEEeecc
Q 043471 36 SDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA---GHVIALDFIDSVIKKNEEVNGHFE--NVKFMCADVT 110 (485)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~~~~a~~~~~~~~--~~~~~~~d~~ 110 (485)
..+.+.....++..+...++.+|||+|||+|.++..++..+ .+|+|+|+++.+++.|+++....+ +++++++|+.
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~ 264 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADAR 264 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGG
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChh
Confidence 34555566677777788888999999999999999999976 799999999999999998754322 8999999999
Q ss_pred CCCCCCCCCCeeEEEhhhhhhcc-C-----hHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 111 SPDLTFSEDSVDMMFSNWLLMYL-S-----DKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 111 ~~~~~~~~~~~D~v~~~~~~~~~-~-----~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+ ++.+.+.||+|+++-.+... . ...+..+++++.++|+|||.+++..+
T Consensus 265 ~--~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 265 H--LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp G--GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred h--CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 8 55556779999997543221 1 11146899999999999999999755
No 371
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.42 E-value=9.2e-14 Score=133.40 Aligned_cols=109 Identities=19% Similarity=0.326 Sum_probs=88.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC------CChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCG------IGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCT 341 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG------~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~ 341 (485)
...+.+++.+.. ++.+||||||| +|..+..+++++ +.+|+|+|+|+.|. . ...+++++++|+.
T Consensus 204 ~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~--~~~rI~fv~GDa~ 274 (419)
T 3sso_A 204 PHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V--DELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G--CBTTEEEEECCTT
T ss_pred HHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h--cCCCcEEEEeccc
Confidence 556677776643 45799999999 777777777653 67999999999983 1 2348999999999
Q ss_pred CCCCC------CCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 342 KKTYP------ENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 342 ~~~~~------~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
++++. +++||+|++.. .++..+...+|++++++|||||++++.+..
T Consensus 275 dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 98776 68999999975 466678899999999999999999999865
No 372
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.42 E-value=2.8e-13 Score=123.14 Aligned_cols=107 Identities=20% Similarity=0.297 Sum_probs=87.3
Q ss_pred CCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCC--CC---CCCc
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKT--YP---ENSF 350 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~--~~---~~~f 350 (485)
...++.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++. ++..+++++.+|+.+.. ++ .++|
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 34567899999999999999999986 5799999999999999999886 44457999999986531 11 2679
Q ss_pred cEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 351 DVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 351 D~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
|+|++.... .....+++++.++|||||.+++.+...
T Consensus 135 D~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 135 DFIFIDADK---QNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp SEEEECSCG---GGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred CEEEEcCCc---HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 999987652 356789999999999999998876543
No 373
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.42 E-value=3e-13 Score=127.18 Aligned_cols=129 Identities=22% Similarity=0.289 Sum_probs=100.6
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPD 113 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~ 113 (485)
+.....++..+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++.... ++++++.+|+.+.
T Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 176 (277)
T 1o54_A 98 PKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG- 176 (277)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-
Confidence 344456777778888999999999999999999987 469999999999999999875322 4799999999873
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhccee
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQ 193 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (485)
+++++||+|+++ .++ ...+++++.++|+|||.+++..+... ....+...+.+.||.
T Consensus 177 --~~~~~~D~V~~~-----~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~---------------~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 177 --FDEKDVDALFLD-----VPD--PWNYIDKCWEALKGGGRFATVCPTTN---------------QVQETLKKLQELPFI 232 (277)
T ss_dssp --CSCCSEEEEEEC-----CSC--GGGTHHHHHHHEEEEEEEEEEESSHH---------------HHHHHHHHHHHSSEE
T ss_pred --ccCCccCEEEEC-----CcC--HHHHHHHHHHHcCCCCEEEEEeCCHH---------------HHHHHHHHHHHCCCc
Confidence 456789999984 344 34799999999999999999765321 223455666677774
No 374
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.42 E-value=6.3e-14 Score=127.58 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=84.1
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCC-CC----CC
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLT-FS----ED 119 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~-~~----~~ 119 (485)
...++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|+++.. ..++++++++|+.+. ++ +. .+
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~~ 139 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT-LAELIHAGQAW 139 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH-HHHHHTTTCTT
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH-HHHhhhccCCC
Confidence 3456789999999999999999987 6799999999999999998753 224699999998652 11 11 17
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
+||+|++... ......+++++.++|+|||++++.+...
T Consensus 140 ~fD~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 140 QYDLIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp CEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CccEEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 8999996542 2236689999999999999999976654
No 375
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.42 E-value=1.5e-13 Score=123.71 Aligned_cols=103 Identities=16% Similarity=0.195 Sum_probs=82.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCCCCCCeeEEEh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTFSEDSVDMMFS 126 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~D~v~~ 126 (485)
.++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|+++... .++++++++|+.+. ++..++ ||+|++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-AAGQRD-IDILFM 132 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH-HTTCCS-EEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH-hccCCC-CCEEEE
Confidence 45779999999999999999987 67999999999999999986432 23699999998652 233346 999998
Q ss_pred hhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 127 NWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
... ... ...+++++.++|+|||++++.+...
T Consensus 133 ~~~---~~~--~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 133 DCD---VFN--GADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp ETT---TSC--HHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred cCC---hhh--hHHHHHHHHHhcCCCeEEEEECccc
Confidence 732 223 5689999999999999999865543
No 376
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.42 E-value=3.2e-14 Score=130.81 Aligned_cols=107 Identities=19% Similarity=0.169 Sum_probs=85.0
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCCC-----CC
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTFS-----ED 119 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~~-----~~ 119 (485)
...++.+|||||||+|..+..+++. +.+|+++|+++++++.|+++.. ..++++++++|+.+. ++.. ++
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-l~~~~~~~~~~ 135 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT-LHSLLNEGGEH 135 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH-HHHHHHHHCSS
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-HHHHhhccCCC
Confidence 4456789999999999999999985 5799999999999998888653 234899999998753 1111 47
Q ss_pred CeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 120 SVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
+||+|++... ......+++++.++|+|||++++.+..+.
T Consensus 136 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 136 QFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp CEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred CEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 8999998643 22366899999999999999999766543
No 377
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.42 E-value=1.6e-12 Score=116.68 Aligned_cols=119 Identities=10% Similarity=0.060 Sum_probs=94.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhhcC--cEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCCCCCCeeEEEhhh
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKAG--HVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTFSEDSVDMMFSNW 128 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~ 128 (485)
++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|+++.. ...++++.++|..+. ..+.++||+|++.+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~--~~~~~~~D~IviaG 98 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSA--FEEADNIDTITICG 98 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG--CCGGGCCCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhc--cccccccCEEEEeC
Confidence 478999999999999999999863 79999999999999998753 224799999998763 23334799988654
Q ss_pred hhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceecC
Q 043471 129 LLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDA 195 (485)
Q Consensus 129 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (485)
+ .......++.+..+.|+++|+++++... ..+.+++++.+.||...
T Consensus 99 m----Gg~lI~~IL~~~~~~l~~~~~lIlqp~~-----------------~~~~lr~~L~~~Gf~i~ 144 (230)
T 3lec_A 99 M----GGRLIADILNNDIDKLQHVKTLVLQPNN-----------------REDDLRKWLAANDFEIV 144 (230)
T ss_dssp E----CHHHHHHHHHHTGGGGTTCCEEEEEESS-----------------CHHHHHHHHHHTTEEEE
T ss_pred C----chHHHHHHHHHHHHHhCcCCEEEEECCC-----------------ChHHHHHHHHHCCCEEE
Confidence 4 3233668899999999999999997532 46789999999998543
No 378
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.42 E-value=5.9e-14 Score=127.60 Aligned_cols=114 Identities=18% Similarity=0.114 Sum_probs=86.9
Q ss_pred HHHhccC-CCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCC
Q 043471 44 PEVLSLL-PPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTF 116 (485)
Q Consensus 44 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~ 116 (485)
..++..+ ...++.+|||||||+|..+..+++. +.+|+|+|+++.+++.|+++.. ..++++++++|+.+....+
T Consensus 47 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 47 GKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3444433 4456789999999999999999998 6799999999999999998753 2236999999986521011
Q ss_pred C---CCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 117 S---EDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 117 ~---~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
+ .++||+|++... ......+++++.++|+|||++++.+...
T Consensus 127 ~~~~~~~fD~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 127 ENEKYEPFDFIFIDAD-----KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHTTCCCCSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HhcCCCCcCEEEEcCC-----cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 1 157999998654 2225689999999999999999876544
No 379
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.42 E-value=6.8e-13 Score=122.47 Aligned_cols=106 Identities=18% Similarity=0.390 Sum_probs=83.0
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCC--------C-CCeEEEEccCCC-CC--CCC
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGL--------K-CSVEFEVADCTK-KT--YPE 347 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~--------~-~~i~~~~~d~~~-~~--~~~ 347 (485)
++++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|++++... + .++.++.+|+.+ ++ ++.
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 4567799999999999999999886 469999999999999998876421 1 479999999987 44 667
Q ss_pred CCccEEEEcccccccCC--------HHHHHHHHHhcCCCCcEEEEEe
Q 043471 348 NSFDVIYSRDTILHIQD--------KPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 348 ~~fD~i~~~~~~~~~~~--------~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
+++|.|+....-.+... ...+++++.++|+|||.+++..
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 88999986432111100 1589999999999999999963
No 380
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.42 E-value=4.6e-13 Score=123.59 Aligned_cols=106 Identities=16% Similarity=0.220 Sum_probs=80.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcC----------CCCCeEEEEeeccCC-CCCCCCC
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNG----------HFENVKFMCADVTSP-DLTFSED 119 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~----------~~~~~~~~~~d~~~~-~~~~~~~ 119 (485)
.++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|+++.. ...+++++++|+.+. +..++++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 357799999999999999999985 479999999999999887532 235899999999762 2226678
Q ss_pred CeeEEEhhhhhhccChH------HHHHHHHHHHhhcccCcEEEEE
Q 043471 120 SVDMMFSNWLLMYLSDK------EVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~------~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
++|.|+....-.+.... ....++.++.++|+|||.+++.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 99999865322221110 0147999999999999999995
No 381
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.41 E-value=5.6e-13 Score=128.98 Aligned_cols=114 Identities=22% Similarity=0.253 Sum_probs=87.8
Q ss_pred hhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-c--CcEEEEeCChHHHHHHHHHcCC-------------CCCeEE
Q 043471 41 EERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-A--GHVIALDFIDSVIKKNEEVNGH-------------FENVKF 104 (485)
Q Consensus 41 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~~~~a~~~~~~-------------~~~~~~ 104 (485)
.....++..+...++.+|||+|||+|.++..+++. | .+|+|+|+++.+++.|+++... ..++++
T Consensus 92 ~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 92 KDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 34566777778888999999999999999999987 4 6899999999999999987531 258999
Q ss_pred EEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 105 MCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 105 ~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+++|+.+...++++++||+|++.. +. ...++.++.++|+|||.+++..+.
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~~-----~~--~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALDM-----LN--PHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp EESCTTCCC-------EEEEEECS-----SS--TTTTHHHHGGGEEEEEEEEEEESS
T ss_pred EECChHHcccccCCCCeeEEEECC-----CC--HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999998743245667899999853 22 124789999999999999986553
No 382
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.41 E-value=5e-13 Score=119.33 Aligned_cols=106 Identities=14% Similarity=0.278 Sum_probs=79.5
Q ss_pred HhccCC-CCCCCcEEEEcCCCCcchHHHHhh----cCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCC------
Q 043471 46 VLSLLP-PYEGKTVLEFGAGIGRFTGELAKK----AGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDL------ 114 (485)
Q Consensus 46 ~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~------ 114 (485)
+.+.+. ..++.+|||+|||+|.++..++++ +.+|+|+|+|+.+ ..++++++++|+.+...
T Consensus 13 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 13 LDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------PIPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp HHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------CCTTCEEEECCTTTTSSCCC---
T ss_pred HHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------CCCCceEEEccccchhhhhhccc
Confidence 344333 356789999999999999999987 3689999999931 12579999999987430
Q ss_pred -----------------CCCCCCeeEEEhhhhhhccC----hHH-----HHHHHHHHHhhcccCcEEEEEec
Q 043471 115 -----------------TFSEDSVDMMFSNWLLMYLS----DKE-----VEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 115 -----------------~~~~~~~D~v~~~~~~~~~~----~~~-----~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
.+++++||+|+++.++++.. +.. ...+++++.++|+|||.+++...
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 04567999999988776642 111 12488999999999999998644
No 383
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.41 E-value=1.3e-12 Score=127.34 Aligned_cols=118 Identities=21% Similarity=0.172 Sum_probs=97.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCC-CeEEEEccCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKC-SVEFEVADCTKKTYP 346 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~-~i~~~~~d~~~~~~~ 346 (485)
..+..++......++.+|||+|||+|.++..++... +.+++|+|+++.+++.|++++...+. ++++.++|+.+++.+
T Consensus 190 ~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 190 VLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT
T ss_pred HHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc
Confidence 455667777888889999999999999999999864 37999999999999999999863332 799999999998777
Q ss_pred CCCccEEEEcccccccC--------CHHHHHHHHHhcCCCCcEEEEEec
Q 043471 347 ENSFDVIYSRDTILHIQ--------DKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
..+||+|+++..+..-. ....+++++.++|||||++++.+.
T Consensus 270 ~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 77899999976654321 136789999999999999999843
No 384
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.41 E-value=3.1e-13 Score=123.14 Aligned_cols=110 Identities=11% Similarity=0.178 Sum_probs=88.3
Q ss_pred hhhHHHhccCC--CCCCCcEEEEcCCCCcchHHHHhh-c-------CcEEEEeCChHHHHHHHHHcCC-------CCCeE
Q 043471 41 EERPEVLSLLP--PYEGKTVLEFGAGIGRFTGELAKK-A-------GHVIALDFIDSVIKKNEEVNGH-------FENVK 103 (485)
Q Consensus 41 ~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~-------~~v~giD~s~~~~~~a~~~~~~-------~~~~~ 103 (485)
.....+++.+. ..++.+|||||||+|..+..+++. + .+|+|+|+++++++.|+++... ..+++
T Consensus 69 ~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 148 (227)
T 1r18_A 69 HMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLL 148 (227)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceE
Confidence 33456667663 567889999999999999999885 4 4899999999999999987532 25899
Q ss_pred EEEeeccCCCCCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 104 FMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 104 ~~~~d~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
++.+|+... ++ ..++||+|++...++++. +++.+.|+|||++++...
T Consensus 149 ~~~~d~~~~-~~-~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 149 IVEGDGRKG-YP-PNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEESCGGGC-CG-GGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEECCcccC-CC-cCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 999999762 21 237899999998888876 468899999999999754
No 385
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.41 E-value=5.4e-13 Score=128.07 Aligned_cols=107 Identities=20% Similarity=0.227 Sum_probs=85.4
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCC-CeEEEEccCCCCCC----CCCCccEE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKC-SVEFEVADCTKKTY----PENSFDVI 353 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~-~i~~~~~d~~~~~~----~~~~fD~i 353 (485)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++. ++.. +++++++|+.+... ..++||+|
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred cCCCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 346779999999999999999987 6799999999999999999876 3333 48999999876421 14689999
Q ss_pred EEccc----------ccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 354 YSRDT----------ILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 354 ~~~~~----------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
++... +.+..+...+++++.++|+|||.+++....
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 99543 223345778999999999999998887543
No 386
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.40 E-value=1.1e-12 Score=121.24 Aligned_cols=113 Identities=23% Similarity=0.276 Sum_probs=92.0
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLTF 116 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~~ 116 (485)
......++..+...++.+|||+|||+|.++..+++.+.+|+++|+|+++++.|+++... .++++++.+|+.+. .+
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~ 154 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA--EV 154 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS--CC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhc--cc
Confidence 44455677777778899999999999999999998888999999999999999987532 25799999998763 22
Q ss_pred CCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 117 SEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++++||+|+++ .++ ...+++++.++|+|||.+++..+.
T Consensus 155 ~~~~~D~v~~~-----~~~--~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 155 PEGIFHAAFVD-----VRE--PWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CTTCBSEEEEC-----SSC--GGGGHHHHHHHBCTTCEEEEEESS
T ss_pred CCCcccEEEEC-----CcC--HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 45789999984 333 347899999999999999997653
No 387
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.40 E-value=4.3e-13 Score=126.35 Aligned_cols=107 Identities=15% Similarity=0.179 Sum_probs=80.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcC-------CCCCeEEEEeeccCCCCCCCCCCeeE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNG-------HFENVKFMCADVTSPDLTFSEDSVDM 123 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~D~ 123 (485)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.|+++.. ..++++++.+|+... +...+++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~-l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF-VNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC----CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH-HhhcCCCccE
Confidence 45789999999999999999987 4589999999999999998753 235899999998764 2334679999
Q ss_pred EEhhhhhhccChHHH--HHHHHHHHhhcccCcEEEEEec
Q 043471 124 MFSNWLLMYLSDKEV--EKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 124 v~~~~~~~~~~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
|++.......+.... ..+++++.++|+|||++++...
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 999655433332212 6799999999999999999643
No 388
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.40 E-value=2.2e-13 Score=133.10 Aligned_cols=140 Identities=16% Similarity=0.202 Sum_probs=106.2
Q ss_pred HHhccC--CCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCC
Q 043471 45 EVLSLL--PPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDS 120 (485)
Q Consensus 45 ~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 120 (485)
.+++.+ ...++.+|||||||+|.++..++++. .+++++|+ +.+++.|++ .++++++.+|+.+ ++ + .
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~--~--~ 251 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----NENLNFVGGDMFK-SI--P--S 251 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----CSSEEEEECCTTT-CC--C--C
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----CCCcEEEeCccCC-CC--C--C
Confidence 345555 23456799999999999999999884 57999999 788876654 2569999999876 33 3 4
Q ss_pred eeEEEhhhhhhccChHHHHHHHHHHHhhccc---CcEEEEEeccCCCCCcc-----ccC--------CCCCCCCChhHHH
Q 043471 121 VDMMFSNWLLMYLSDKEVEKLAERMVKWLKV---GGYIFFRESCFHQSGDS-----KRK--------HNPTHYREPRFYS 184 (485)
Q Consensus 121 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~ 184 (485)
||+|++..++||++++...+++++++++|+| ||.+++.+......... ... ......++.+.|.
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~ 331 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWE 331 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHH
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHH
Confidence 9999999999999987777999999999999 99999988765432211 000 0012234788899
Q ss_pred HHhhhcceec
Q 043471 185 KVFKECQIQD 194 (485)
Q Consensus 185 ~~~~~~~~~~ 194 (485)
++++++||..
T Consensus 332 ~ll~~aGf~~ 341 (358)
T 1zg3_A 332 KLIYDAGFSS 341 (358)
T ss_dssp HHHHHTTCCE
T ss_pred HHHHHcCCCe
Confidence 9999999854
No 389
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.40 E-value=3.6e-13 Score=128.00 Aligned_cols=131 Identities=13% Similarity=0.092 Sum_probs=93.7
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcC------CCCCeEEEEeeccCCCCCCCCCCeeE
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNG------HFENVKFMCADVTSPDLTFSEDSVDM 123 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~D~ 123 (485)
..++.+|||||||+|.++..+++. ..+|+++|+++.+++.|+++.. ..++++++.+|+.+.....++++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 356789999999999999999987 4699999999999999998752 23689999999976321114679999
Q ss_pred EEhhhhhhccChHHH--HHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhccee
Q 043471 124 MFSNWLLMYLSDKEV--EKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQ 193 (485)
Q Consensus 124 v~~~~~~~~~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (485)
|++....++.+.... .++++++.++|+|||.+++...+... .......+.+.++++||.
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-----------~~~~~~~~~~~l~~~GF~ 233 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL-----------DLELIEKMSRFIRETGFA 233 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT-----------CHHHHHHHHHHHHHHTCS
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc-----------chHHHHHHHHHHHhCCCC
Confidence 999765554433212 58999999999999999997432110 011344566777787774
No 390
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.40 E-value=8.6e-13 Score=123.69 Aligned_cols=113 Identities=18% Similarity=0.130 Sum_probs=90.9
Q ss_pred HHcCCCCCCEEEEECCCCChhHHHHhhcC-C-CEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCC----CCCC
Q 043471 277 AKLDLKPGQKVLDVGCGIGGGDFYMADKF-D-VHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTY----PENS 349 (485)
Q Consensus 277 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~-~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~----~~~~ 349 (485)
..+...++.+|||+|||+|..+..+++.. + .+|+|+|+++.+++.+++++...+ .++++.++|+.+.+. ..++
T Consensus 77 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 77 IVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp HHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCC
T ss_pred HHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhcccc
Confidence 34467789999999999999999999865 3 699999999999999999986444 379999999877643 2578
Q ss_pred ccEEEEccccc------------------ccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 350 FDVIYSRDTIL------------------HIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 350 fD~i~~~~~~~------------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
||+|++..... .......+++++.++|||||++++++...
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 99999873221 12456889999999999999999986543
No 391
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.39 E-value=6.1e-13 Score=127.12 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=98.0
Q ss_pred HHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCCCC
Q 043471 45 EVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 45 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~~~ 119 (485)
.+...+...++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++... ..+++++++|+..+ +..++
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~--~~~~~ 186 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHI--GELNV 186 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGG--GGGCC
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhc--ccccc
Confidence 3445567778899999999999999999986 36899999999999999987532 24799999999873 33457
Q ss_pred CeeEEEhh------hhhhccCh-------H-------HHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCC
Q 043471 120 SVDMMFSN------WLLMYLSD-------K-------EVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYRE 179 (485)
Q Consensus 120 ~~D~v~~~------~~~~~~~~-------~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 179 (485)
+||+|++. +++.+.++ . ...++++++.++|||||++++++.+.... ..
T Consensus 187 ~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~------------En 254 (315)
T 1ixk_A 187 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE------------EN 254 (315)
T ss_dssp CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG------------GT
T ss_pred cCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH------------Hh
Confidence 89999973 22332221 0 12589999999999999999987654321 12
Q ss_pred hhHHHHHhhhcceec
Q 043471 180 PRFYSKVFKECQIQD 194 (485)
Q Consensus 180 ~~~~~~~~~~~~~~~ 194 (485)
......++++.++..
T Consensus 255 e~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 255 EFVIQWALDNFDVEL 269 (315)
T ss_dssp HHHHHHHHHHSSEEE
T ss_pred HHHHHHHHhcCCCEE
Confidence 334566677666643
No 392
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.39 E-value=3.3e-12 Score=113.91 Aligned_cols=95 Identities=19% Similarity=0.146 Sum_probs=76.7
Q ss_pred CCCCCCEEEEECCCCChhHHHHhhcCCC-EEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccc
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMADKFDV-HVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDT 358 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~ 358 (485)
...++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.|+++.. +++++++|+.+++ ++||+|+++..
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~---~~~D~v~~~~p 119 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEIS---GKYDTWIMNPP 119 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGCC---CCEEEEEECCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHCC---CCeeEEEECCC
Confidence 4557789999999999999999987 54 79999999999999999875 7899999998864 68999999999
Q ss_pred ccccCC--HHHHHHHHHhcCCCCcEEEEE
Q 043471 359 ILHIQD--KPALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 359 ~~~~~~--~~~~l~~~~~~LkpgG~l~i~ 385 (485)
++|..+ ...+++++.+++ |+ +++.
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp C-------CHHHHHHHHHHE--EE-EEEE
T ss_pred chhccCchhHHHHHHHHHhc--Cc-EEEE
Confidence 998853 457899999998 44 4443
No 393
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.39 E-value=1.3e-12 Score=116.58 Aligned_cols=97 Identities=19% Similarity=0.195 Sum_probs=76.3
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCCCCCeeEEEhhhh
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWL 129 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~ 129 (485)
...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++.. +++++++|+.+ ++ ++||+|+++..
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~~d~~~--~~---~~~D~v~~~~p 119 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG---GVNFMVADVSE--IS---GKYDTWIMNPP 119 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---TSEEEECCGGG--CC---CCEEEEEECCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC---CCEEEECcHHH--CC---CCeeEEEECCC
Confidence 345788999999999999999998865 69999999999999999874 79999999987 32 68999999998
Q ss_pred hhccChHHHHHHHHHHHhhcccCcEEEE
Q 043471 130 LMYLSDKEVEKLAERMVKWLKVGGYIFF 157 (485)
Q Consensus 130 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 157 (485)
++|........+++++.+.+ |+.+++
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp C-------CHHHHHHHHHHE--EEEEEE
T ss_pred chhccCchhHHHHHHHHHhc--CcEEEE
Confidence 88886543457899999988 443333
No 394
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.39 E-value=9.9e-13 Score=123.78 Aligned_cols=114 Identities=21% Similarity=0.216 Sum_probs=88.8
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSPDL 114 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~ 114 (485)
.++.....+++.+...++.+|||||||+|.++..|++.+.+|+|+|+|+.|++.++++.... ++++++++|+.+.++
T Consensus 12 ~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 12 KNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 46677888999998888999999999999999999999999999999999999999986532 479999999987443
Q ss_pred CCCCCCeeEEEhhhhhhccChHHHHHHH--------------HHH--HhhcccCcEEE
Q 043471 115 TFSEDSVDMMFSNWLLMYLSDKEVEKLA--------------ERM--VKWLKVGGYIF 156 (485)
Q Consensus 115 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l--------------~~~--~~~L~pgG~l~ 156 (485)
.+||+|+++..++ +..+....++ +++ .++|+|||.++
T Consensus 92 ----~~fD~vv~nlpy~-~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 92 ----PFFDTCVANLPYQ-ISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp ----CCCSEEEEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ----hhhcEEEEecCcc-cchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 3799999975433 3322233333 233 35889998763
No 395
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.38 E-value=8.1e-12 Score=115.87 Aligned_cols=130 Identities=16% Similarity=0.112 Sum_probs=102.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCccEEEEccc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSFDVIYSRDT 358 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~ 358 (485)
+++|.+|||+|||+|.++..++++...+|+++|++|.+++.+++++. ++..+++++++|..+++ +.+.||.|++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC
Confidence 56889999999999999999998855699999999999999999886 55567999999998875 3578999997643
Q ss_pred ccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEE
Q 043471 359 ILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIA 429 (485)
Q Consensus 359 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 429 (485)
+....++..+.++|||||++.+.+....... .-...+.+.+.++..|+++..+
T Consensus 202 ----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~--------------~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM--------------PREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--------------TTTTHHHHHHHHHHTTCEEEEE
T ss_pred ----CcHHHHHHHHHHHcCCCCEEEEEeeeccccc--------------chhHHHHHHHHHHHcCCcEEEE
Confidence 3456788889999999999987755432211 1123466778889999986443
No 396
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.38 E-value=8.8e-14 Score=127.84 Aligned_cols=107 Identities=18% Similarity=0.236 Sum_probs=88.0
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCC------CCCc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYP------ENSF 350 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~------~~~f 350 (485)
..++.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++. ++..+++++.+|+.+.... +++|
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 3456799999999999999999865 5799999999999999999886 4446899999998664211 4789
Q ss_pred cEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccC
Q 043471 351 DVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKS 390 (485)
Q Consensus 351 D~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 390 (485)
|+|++... ..+...+++++.++|||||.+++.+....
T Consensus 138 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 138 DFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp EEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred eEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 99998754 34677899999999999999999876543
No 397
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.38 E-value=4.8e-13 Score=121.71 Aligned_cols=106 Identities=19% Similarity=0.301 Sum_probs=86.4
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCC-C-CC----CCCc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKK-T-YP----ENSF 350 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~-~-~~----~~~f 350 (485)
..++.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++. +...++++.++|+.+. + +. .++|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 3467799999999999999999875 5799999999999999999886 3445699999998553 1 11 1789
Q ss_pred cEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 351 DVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 351 D~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
|+|++... ..+...+++++.++|||||++++.+...
T Consensus 142 D~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 142 DLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred cEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 99997553 3467889999999999999999987654
No 398
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.38 E-value=3.5e-13 Score=129.38 Aligned_cols=117 Identities=11% Similarity=0.012 Sum_probs=86.5
Q ss_pred HHhccCC-CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC--CC--CeEEEEeeccCCCCCC--C
Q 043471 45 EVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH--FE--NVKFMCADVTSPDLTF--S 117 (485)
Q Consensus 45 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~--~~--~~~~~~~d~~~~~~~~--~ 117 (485)
.+.+.+. ..++.+|||+|||+|.+++.+++.|.+|+|+|+|+.+++.|+++... .. +++++++|+.+..... .
T Consensus 143 ~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~ 222 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR 222 (332)
T ss_dssp HHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc
Confidence 3555543 34578999999999999999999988999999999999999987431 12 4999999997631000 1
Q ss_pred CCCeeEEEhhhhhhcc--------ChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 118 EDSVDMMFSNWLLMYL--------SDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~--------~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
.++||+|++.-..... .......+++++.++|+|||++++...+
T Consensus 223 ~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 223 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 4689999985321110 0123678999999999999998886554
No 399
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.8e-12 Score=121.21 Aligned_cols=105 Identities=17% Similarity=0.099 Sum_probs=89.6
Q ss_pred CCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCCCCccEEEEcc
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPENSFDVIYSRD 357 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~~fD~i~~~~ 357 (485)
.+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+ .++.++.+|+.+.+. .++||+|++..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECC
Confidence 36678899999999999999999885 4599999999999999999886443 378899999988743 57899999976
Q ss_pred cccccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 358 TILHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 358 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
.. +...++.++.+.|+|||++++++...
T Consensus 195 p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 VH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 54 67789999999999999999987654
No 400
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.38 E-value=1.7e-12 Score=122.03 Aligned_cols=114 Identities=19% Similarity=0.257 Sum_probs=88.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCC--CCCeEEEEccCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGL--KCSVEFEVADCTKKTYPE 347 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~i~~~~~d~~~~~~~~ 347 (485)
..++.+++.+...++.+|||+|||+|.++..+++..+.+|+|+|+|+.+++.|++++... ..+++++++|+.+. ++
T Consensus 110 ~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~- 187 (284)
T 1nv8_A 110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK- 187 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-
T ss_pred HHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-
Confidence 344555555544466799999999999999998874569999999999999999998643 34599999999873 33
Q ss_pred CCc---cEEEEccccc-----------cc--------CCHHHHHHHHH-hcCCCCcEEEEE
Q 043471 348 NSF---DVIYSRDTIL-----------HI--------QDKPALFKSFF-KWLKPGGTVLIS 385 (485)
Q Consensus 348 ~~f---D~i~~~~~~~-----------~~--------~~~~~~l~~~~-~~LkpgG~l~i~ 385 (485)
++| |+|+++.... |- .+...+++++. +.|+|||++++.
T Consensus 188 ~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 188 EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 578 9999973221 22 12337899999 999999999986
No 401
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.38 E-value=3.3e-12 Score=125.06 Aligned_cols=135 Identities=19% Similarity=0.122 Sum_probs=104.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC-CEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD-VHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKTYP 346 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~~~ 346 (485)
..+..++... ..++.+|||+|||+|.++..++.... .+++|+|+|+.|++.|++++...+ .++++.++|+.+++++
T Consensus 205 ~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~ 283 (373)
T 3tm4_A 205 SIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY 283 (373)
T ss_dssp HHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT
T ss_pred HHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc
Confidence 4455566666 77889999999999999999998742 399999999999999999986433 4899999999999887
Q ss_pred CCCccEEEEccccccc----CC----HHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHH
Q 043471 347 ENSFDVIYSRDTILHI----QD----KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQM 418 (485)
Q Consensus 347 ~~~fD~i~~~~~~~~~----~~----~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (485)
+++||+|+++..+..- .. ...+++++.++| ||.+++... +...+.+.
T Consensus 284 ~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-----------------------~~~~~~~~ 338 (373)
T 3tm4_A 284 VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-----------------------EKKAIEEA 338 (373)
T ss_dssp CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-----------------------CHHHHHHH
T ss_pred cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-----------------------CHHHHHHH
Confidence 7899999998665432 11 267788999988 455444421 35667788
Q ss_pred HHhCCCeEEEEe
Q 043471 419 LKDAGFVDIIAE 430 (485)
Q Consensus 419 l~~aGf~~~~~~ 430 (485)
+++.||+.....
T Consensus 339 ~~~~G~~~~~~~ 350 (373)
T 3tm4_A 339 IAENGFEIIHHR 350 (373)
T ss_dssp HHHTTEEEEEEE
T ss_pred HHHcCCEEEEEE
Confidence 899999987643
No 402
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.37 E-value=1.8e-13 Score=127.64 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=83.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc---CCCCCeEEE--EccCCCCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI---GLKCSVEFE--VADCTKKTY 345 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~---~~~~~i~~~--~~d~~~~~~ 345 (485)
.+..+++...++++.+|||+|||+|.++..++++ .+|+|+|+|+ |+..++++.. ..+.++.++ ++|+.+++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~- 145 (276)
T 2wa2_A 70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME- 145 (276)
T ss_dssp HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-
T ss_pred HHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-
Confidence 3455666655678899999999999999999988 5999999998 6433322110 112268888 89998865
Q ss_pred CCCCccEEEEcccccccCCH----H---HHHHHHHhcCCCCc--EEEEEecc
Q 043471 346 PENSFDVIYSRDTILHIQDK----P---ALFKSFFKWLKPGG--TVLISDYC 388 (485)
Q Consensus 346 ~~~~fD~i~~~~~~~~~~~~----~---~~l~~~~~~LkpgG--~l~i~~~~ 388 (485)
+++||+|+|..+ ++..++ . .+|+++.++||||| .+++..+.
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 689999999877 444332 1 37899999999999 99987554
No 403
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.37 E-value=2.7e-13 Score=125.77 Aligned_cols=113 Identities=17% Similarity=0.197 Sum_probs=84.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHh---cCCCCCeEEE--EccCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERA---IGLKCSVEFE--VADCTKKT 344 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~~~i~~~--~~d~~~~~ 344 (485)
..+..+++...++++.+|||+|||+|.++..++++ .+|+|+|+++ |+..++++. ...+.++.++ ++|+.+++
T Consensus 61 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 61 AKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp HHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 44566677766778999999999999999999987 5999999998 533222111 0111268888 89998875
Q ss_pred CCCCCccEEEEcccccccCCH----H---HHHHHHHhcCCCCc--EEEEEecc
Q 043471 345 YPENSFDVIYSRDTILHIQDK----P---ALFKSFFKWLKPGG--TVLISDYC 388 (485)
Q Consensus 345 ~~~~~fD~i~~~~~~~~~~~~----~---~~l~~~~~~LkpgG--~l~i~~~~ 388 (485)
+++||+|+|..+ ++..++ . .+|+.+.++||||| .+++..+.
T Consensus 138 --~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 --VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp --CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred --CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 689999999877 544332 1 37899999999999 99987654
No 404
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.37 E-value=1.9e-12 Score=125.32 Aligned_cols=102 Identities=28% Similarity=0.354 Sum_probs=84.0
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCCCCCCCCccEEEEc---
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKKTYPENSFDVIYSR--- 356 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~~~~~~~fD~i~~~--- 356 (485)
-+++.|||||||+|.++...++....+|+|+|.|+ |++.|++.+. ++..+|+++.+|++++.++ ++||+|++-
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMG 159 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCB
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccc
Confidence 36789999999999999887776335899999996 8888988765 5667899999999998876 789999994
Q ss_pred ccccccCCHHHHHHHHHhcCCCCcEEEEE
Q 043471 357 DTILHIQDKPALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 357 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 385 (485)
..+.+-...+.++....|+|||||.++-.
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccchhhhHHHHHHhhCCCCceECCc
Confidence 34444457888999999999999998644
No 405
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.37 E-value=1.4e-11 Score=110.43 Aligned_cols=128 Identities=13% Similarity=0.105 Sum_probs=97.7
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccc
Q 043471 279 LDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDT 358 (485)
Q Consensus 279 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~ 358 (485)
....++.+|||+|||+|.++..+++....+++|+|+|+.+++.|++++...+.+++++++|+.+++ ++||+|+++..
T Consensus 45 ~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p 121 (207)
T 1wy7_A 45 LGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPP 121 (207)
T ss_dssp TTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCC
T ss_pred cCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCC
Confidence 345678899999999999999999873348999999999999999998754447999999998864 48999999988
Q ss_pred ccccC--CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEee
Q 043471 359 ILHIQ--DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAED 431 (485)
Q Consensus 359 ~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 431 (485)
+++.. ....+++++.++| ||. ++..... . .+.+.+.+.+++.||++..+..
T Consensus 122 ~~~~~~~~~~~~l~~~~~~l--~~~-~~~~~~~------~-------------~~~~~~~~~l~~~g~~~~~~~~ 174 (207)
T 1wy7_A 122 FGSQRKHADRPFLLKAFEIS--DVV-YSIHLAK------P-------------EVRRFIEKFSWEHGFVVTHRLT 174 (207)
T ss_dssp CSSSSTTTTHHHHHHHHHHC--SEE-EEEEECC------H-------------HHHHHHHHHHHHTTEEEEEEEE
T ss_pred CccccCCchHHHHHHHHHhc--CcE-EEEEeCC------c-------------CCHHHHHHHHHHCCCeEEEEEE
Confidence 87763 4567899999998 554 4432110 0 1134567788999998766544
No 406
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.37 E-value=1.7e-13 Score=124.83 Aligned_cols=141 Identities=18% Similarity=0.164 Sum_probs=89.0
Q ss_pred hhHHHhccCCCC-CCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCC-----CCeEEEE-eeccCCC
Q 043471 42 ERPEVLSLLPPY-EGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHF-----ENVKFMC-ADVTSPD 113 (485)
Q Consensus 42 ~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~-----~~~~~~~-~d~~~~~ 113 (485)
....+++.+... ++.+|||||||+|.++..|++.|. +|+|+|+|++|++.|+++.... .++.+.. .++..
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-- 101 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ-- 101 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--
Confidence 445667777654 577999999999999999999985 9999999999999987754310 1222222 12111
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCC-----CC-CCCCChhHHHHHh
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKH-----NP-THYREPRFYSKVF 187 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~ 187 (485)
..+...+||+++++. ..++.+++++|||||.+++............-.. ++ .+....+.+...+
T Consensus 102 ~~~d~~~~D~v~~~l----------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l 171 (232)
T 3opn_A 102 GRPSFTSIDVSFISL----------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTA 171 (232)
T ss_dssp CCCSEEEECCSSSCG----------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEhhhH----------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHH
Confidence 012334677666552 4799999999999999998531100000000000 01 1112456678888
Q ss_pred hhcceec
Q 043471 188 KECQIQD 194 (485)
Q Consensus 188 ~~~~~~~ 194 (485)
+++||..
T Consensus 172 ~~aGf~v 178 (232)
T 3opn_A 172 TQLGFSV 178 (232)
T ss_dssp HHHTEEE
T ss_pred HHCCCEE
Confidence 8999853
No 407
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.37 E-value=1.9e-12 Score=121.89 Aligned_cols=112 Identities=24% Similarity=0.313 Sum_probs=88.1
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKTYP 346 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~~~ 346 (485)
...+..+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++....+ .+++++++|+.+.+++
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 356788889998889999999999999999999988 6799999999999999999876433 4799999999987764
Q ss_pred CCCccEEEEcccc-----------cccCCHHHHH----HHH--HhcCCCCcEEE
Q 043471 347 ENSFDVIYSRDTI-----------LHIQDKPALF----KSF--FKWLKPGGTVL 383 (485)
Q Consensus 347 ~~~fD~i~~~~~~-----------~~~~~~~~~l----~~~--~~~LkpgG~l~ 383 (485)
+||+|+++..+ +|.++...++ +++ +++|+|||.++
T Consensus 93 --~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 --FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp --CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred --hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 79999997433 3333321111 233 46899999764
No 408
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.36 E-value=2.1e-12 Score=118.04 Aligned_cols=105 Identities=19% Similarity=0.286 Sum_probs=85.6
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCC----CCCCC--CCcc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTK----KTYPE--NSFD 351 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~----~~~~~--~~fD 351 (485)
.++.+|||||||+|..+..+++.+ +.+++++|+++.+++.|++++. +...++++..+|+.+ ++..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 456799999999999999999876 4699999999999999998875 344579999998644 22223 7899
Q ss_pred EEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 352 VIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 352 ~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
+|++... ..+...+++++.++|+|||.+++.+...
T Consensus 151 ~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 151 LIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 9998754 2467889999999999999999986543
No 409
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.36 E-value=5.5e-12 Score=126.58 Aligned_cols=115 Identities=23% Similarity=0.253 Sum_probs=93.1
Q ss_pred HHHHcCCCCCCEEEEECCCCChhHHHHhhcC-C-CEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCC--CCCCC
Q 043471 275 FVAKLDLKPGQKVLDVGCGIGGGDFYMADKF-D-VHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKT--YPENS 349 (485)
Q Consensus 275 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~-~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~--~~~~~ 349 (485)
+...+...++.+|||+|||+|..+..+++.. + .+|+++|+|+.+++.+++++...+ .++++.++|+...+ +++++
T Consensus 251 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 251 ASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSC
T ss_pred HHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCC
Confidence 3445578889999999999999999999876 3 699999999999999999987444 37999999998875 55578
Q ss_pred ccEEEE------cccccccCCH----------------HHHHHHHHhcCCCCcEEEEEeccc
Q 043471 350 FDVIYS------RDTILHIQDK----------------PALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 350 fD~i~~------~~~~~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
||+|++ .+++.+.++. ..+++++.++|||||++++++...
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999996 3344444443 578999999999999999986543
No 410
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.36 E-value=3.8e-12 Score=115.12 Aligned_cols=118 Identities=8% Similarity=0.043 Sum_probs=94.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhhcC--cEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCCCCCCeeEEEhhh
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKAG--HVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTFSEDSVDMMFSNW 128 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~ 128 (485)
++.+|||||||+|.++..|++.+. +|+|+|+++.+++.|+++.. ...++++.++|..+. ..+..+||+|++.+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~--~~~~~~~D~Iviag 98 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAV--IEKKDAIDTIVIAG 98 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG--CCGGGCCCEEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhc--cCccccccEEEEeC
Confidence 468999999999999999999863 79999999999999998753 224699999998763 22333699988654
Q ss_pred hhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceec
Q 043471 129 LLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQD 194 (485)
Q Consensus 129 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (485)
+ .......++.+..+.|+++|+++++... ..+.+++++.+.||..
T Consensus 99 m----Gg~lI~~IL~~~~~~L~~~~~lIlq~~~-----------------~~~~lr~~L~~~Gf~i 143 (244)
T 3gnl_A 99 M----GGTLIRTILEEGAAKLAGVTKLILQPNI-----------------AAWQLREWSEQNNWLI 143 (244)
T ss_dssp E----CHHHHHHHHHHTGGGGTTCCEEEEEESS-----------------CHHHHHHHHHHHTEEE
T ss_pred C----chHHHHHHHHHHHHHhCCCCEEEEEcCC-----------------ChHHHHHHHHHCCCEE
Confidence 3 3334678899999999999999997432 4678899999999864
No 411
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.36 E-value=8.5e-13 Score=121.62 Aligned_cols=104 Identities=13% Similarity=0.214 Sum_probs=86.1
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCC-C-C-----CCCCc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKK-T-Y-----PENSF 350 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~-~-~-----~~~~f 350 (485)
.++.+|||||||+|..+..+++.+ +.+++++|+++.+++.|++++.. +..+++++.+|+.+. + + ++++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 456799999999999999999876 57999999999999999998763 445799999998653 2 1 15789
Q ss_pred cEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 351 DVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 351 D~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
|+|++... ..+...+++++.++|||||.+++.+..
T Consensus 158 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 158 DFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp SEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred EEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 99998653 357889999999999999999987643
No 412
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=1.2e-12 Score=122.45 Aligned_cols=102 Identities=25% Similarity=0.301 Sum_probs=84.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhcC--cEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCCCCCCCeeEEEhh
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKAG--HVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLTFSEDSVDMMFSN 127 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~ 127 (485)
..++.+|||+|||+|.++..+++++. +|+|+|+|+.+++.|+++.. ...++.++++|+.+. +. .++||+|++.
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~--~~-~~~~D~Vi~d 193 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV--EL-KDVADRVIMG 193 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC--CC-TTCEEEEEEC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc--Cc-cCCceEEEEC
Confidence 45678999999999999999999854 99999999999999998653 235789999999884 22 5789999987
Q ss_pred hhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 128 WLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
... . ...++.++.+.|+|||.+++++...
T Consensus 194 ~p~----~--~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 194 YVH----K--THKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCS----S--GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred Ccc----c--HHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 542 2 4578999999999999999986643
No 413
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.36 E-value=3e-13 Score=124.66 Aligned_cols=105 Identities=19% Similarity=0.229 Sum_probs=83.7
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCC-C-----CC
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLT-F-----SE 118 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~-~-----~~ 118 (485)
...++.+|||||||+|..+..+++. +.+|+++|+|+++++.|+++... .++++++++|+.+. ++ + ++
T Consensus 76 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-l~~l~~~~~~~ 154 (247)
T 1sui_A 76 KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV-LDEMIKDEKNH 154 (247)
T ss_dssp HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH-HHHHHHSGGGT
T ss_pred HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH-HHHHHhccCCC
Confidence 3456779999999999999999987 67999999999999999987532 24799999998652 11 1 15
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++||+|++... ... ...+++++.++|+|||++++.+..
T Consensus 155 ~~fD~V~~d~~---~~~--~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 155 GSYDFIFVDAD---KDN--YLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp TCBSEEEECSC---STT--HHHHHHHHHHHBCTTCCEEEECTT
T ss_pred CCEEEEEEcCc---hHH--HHHHHHHHHHhCCCCeEEEEecCC
Confidence 78999998643 222 678999999999999999987554
No 414
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.36 E-value=5e-13 Score=122.79 Aligned_cols=119 Identities=17% Similarity=0.184 Sum_probs=89.0
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSP 112 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~ 112 (485)
.+.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|+++.... .+++++++|+.+.
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 45 SPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET 124 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence 3334444444444556889999999999999999987 579999999999999999875321 3599999998642
Q ss_pred -C-C-----------CCCC--CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 113 -D-L-----------TFSE--DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 113 -~-~-----------~~~~--~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
+ + .|++ ++||+|++.... .....+++++.++|+|||++++.+..+
T Consensus 125 ~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 125 LQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHhhcccccccccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 0 1 1233 789999987432 225689999999999999999976543
No 415
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.36 E-value=1.9e-12 Score=121.92 Aligned_cols=105 Identities=18% Similarity=0.208 Sum_probs=81.7
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCC------CCCeEEEEccCCCC-CCCCCCccEE
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGL------KCSVEFEVADCTKK-TYPENSFDVI 353 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~------~~~i~~~~~d~~~~-~~~~~~fD~i 353 (485)
.++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++... ..+++++.+|+.+. ...+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 346799999999999999999875 458999999999999999987522 35899999998764 3346789999
Q ss_pred EEcccccccCC----HHHHHHHHHhcCCCCcEEEEEe
Q 043471 354 YSRDTILHIQD----KPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 354 ~~~~~~~~~~~----~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
++...-...+. ...++++++++|+|||++++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99554322222 2779999999999999999875
No 416
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.36 E-value=2.8e-13 Score=126.38 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=80.5
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC---CCC-CeEEE--EeeccCCCCCCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG---HFE-NVKFM--CADVTSPDLTFS 117 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~---~~~-~~~~~--~~d~~~~~~~~~ 117 (485)
.++++.....++.+|||+|||+|.++..++++ .+|+|+|+|+ |+..++++.. ..+ ++.++ ++|+.. ++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--l~-- 145 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK--ME-- 145 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG--CC--
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh--CC--
Confidence 34555544567889999999999999999998 7999999999 6433322211 111 78999 999987 43
Q ss_pred CCCeeEEEhhhhhhccChHH-----HHHHHHHHHhhcccCc--EEEEEec
Q 043471 118 EDSVDMMFSNWLLMYLSDKE-----VEKLAERMVKWLKVGG--YIFFRES 160 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~-----~~~~l~~~~~~L~pgG--~l~~~~~ 160 (485)
+++||+|+|..+ ++.+... ...+++++.++|+||| .+++...
T Consensus 146 ~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 146 PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 679999999876 4433211 1147899999999999 9988654
No 417
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.35 E-value=5.3e-12 Score=113.08 Aligned_cols=119 Identities=12% Similarity=0.129 Sum_probs=94.0
Q ss_pred CCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCCCCC-CeeEEEhh
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTFSED-SVDMMFSN 127 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~~~~-~~D~v~~~ 127 (485)
++.+|||||||+|.+++.+++.+ .+|+|+|+++.+++.|+++.. ...++++.++|..+. + +.+ +||+|++.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l--~~~~~~D~Ivia 91 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-F--EETDQVSVITIA 91 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-C--CGGGCCCEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-c--ccCcCCCEEEEc
Confidence 57899999999999999999986 389999999999999998753 223699999998542 2 223 69998876
Q ss_pred hhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcceecCC
Q 043471 128 WLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDAS 196 (485)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (485)
++ .......++.++.+.|+|+|+++++... ..+..++++.+.||....
T Consensus 92 G~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~~-----------------~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 92 GM----GGRLIARILEEGLGKLANVERLILQPNN-----------------REDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp EE----CHHHHHHHHHHTGGGCTTCCEEEEEESS-----------------CHHHHHHHHHHTTEEEEE
T ss_pred CC----ChHHHHHHHHHHHHHhCCCCEEEEECCC-----------------CHHHHHHHHHHCCCEEEE
Confidence 53 3333678999999999999999996441 467888999999986443
No 418
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.35 E-value=5.7e-12 Score=112.94 Aligned_cols=112 Identities=21% Similarity=0.199 Sum_probs=85.6
Q ss_pred ChhhhHHHhcc---CCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCC
Q 043471 39 DKEERPEVLSL---LPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPD 113 (485)
Q Consensus 39 ~~~~~~~~~~~---~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~ 113 (485)
+......++.. ....++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++....+ +++++++|+.++
T Consensus 31 ~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~- 109 (207)
T 1wy7_A 31 PGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF- 109 (207)
T ss_dssp CHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-
T ss_pred chHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc-
Confidence 34444444433 2455788999999999999999999865 69999999999999999865333 799999999873
Q ss_pred CCCCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEE
Q 043471 114 LTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFF 157 (485)
Q Consensus 114 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 157 (485)
+ ++||+|+++..+++........+++++.+++ ||.+++
T Consensus 110 -~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 110 -N---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp -C---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred -C---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 2 4899999987776665333557899999988 554443
No 419
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.35 E-value=6e-13 Score=121.64 Aligned_cols=106 Identities=19% Similarity=0.202 Sum_probs=83.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCC--CCCCCC--CCe
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSP--DLTFSE--DSV 121 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~--~~~~~~--~~~ 121 (485)
..++.+|||||||+|..+..+++. +.+|+++|+|+++++.|+++.. ..++++++++|+.+. .++..+ ++|
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 346779999999999999999986 5699999999999999998652 224699999997542 122223 789
Q ss_pred eEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 122 DMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 122 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
|+|++... ......+++++.++|+|||++++.+..+
T Consensus 150 D~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 150 DLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred CEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 99997643 2236789999999999999999976654
No 420
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.35 E-value=8.5e-13 Score=126.50 Aligned_cols=108 Identities=16% Similarity=0.115 Sum_probs=83.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC------CCCeEEEEeeccCCCCCCCCCCeeE
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH------FENVKFMCADVTSPDLTFSEDSVDM 123 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~D~ 123 (485)
..++.+|||||||+|.++..+++. ..+|+++|+|+.+++.|+++... .++++++++|+.+.....++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 456789999999999999999987 46999999999999999987531 3589999999875311124578999
Q ss_pred EEhhhhhhcc-ChH-HHHHHHHHHHhhcccCcEEEEEe
Q 043471 124 MFSNWLLMYL-SDK-EVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 124 v~~~~~~~~~-~~~-~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
|++...-.+. ... ....+++++.++|+|||.+++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9986532111 111 13589999999999999999963
No 421
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.35 E-value=8.7e-12 Score=122.15 Aligned_cols=129 Identities=11% Similarity=0.004 Sum_probs=98.0
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCC-CeEEEEccCCC-CCC-CCCCccEEEEc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKC-SVEFEVADCTK-KTY-PENSFDVIYSR 356 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~-~i~~~~~d~~~-~~~-~~~~fD~i~~~ 356 (485)
..++.+|||+| |+|.++..++... +.+|+|+|+|+.|++.|++++...+. +++++.+|+.+ +|. .+++||+|+++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 34678999999 9999999998874 36999999999999999999863322 79999999988 653 34689999998
Q ss_pred ccccccCCHHHHHHHHHhcCCCCcEE-EEEecccCCCCCChhHHHHHHhcCCCCCCH---HHHHHHHH-hCCCeEEEEe
Q 043471 357 DTILHIQDKPALFKSFFKWLKPGGTV-LISDYCKSFGTPSVEFSEYIKQRGYDLHDV---KSYGQMLK-DAGFVDIIAE 430 (485)
Q Consensus 357 ~~~~~~~~~~~~l~~~~~~LkpgG~l-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~-~aGf~~~~~~ 430 (485)
..++.. ....+++++.++|||||++ ++... .. ..+. ..+.+.+. +.||.+..+.
T Consensus 249 ~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~-~~------------------~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 249 PPETLE-AIRAFVGRGIATLKGPRCAGYFGIT-RR------------------ESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp CCSSHH-HHHHHHHHHHHTBCSTTCEEEEEEC-TT------------------TCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred CCCchH-HHHHHHHHHHHHcccCCeEEEEEEe-cC------------------cCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 765443 3578999999999999954 44422 10 0122 45667777 8999876543
No 422
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.35 E-value=1.1e-12 Score=123.63 Aligned_cols=106 Identities=13% Similarity=0.136 Sum_probs=83.1
Q ss_pred CCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCCCCCCeeEEEhhhhh
Q 043471 55 GKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTFSEDSVDMMFSNWLL 130 (485)
Q Consensus 55 ~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~ 130 (485)
+.+|||||||+|.++..+++. +.+|++||+++.+++.|+++... .++++++.+|+.++...+++++||+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 449999999999999999984 66999999999999999998764 35899999998763112346799999986433
Q ss_pred hccChHH--HHHHHHHHHhhcccCcEEEEEec
Q 043471 131 MYLSDKE--VEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 131 ~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+...... ..+++++++++|+|||++++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2211111 25799999999999999998643
No 423
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.34 E-value=1.3e-12 Score=120.11 Aligned_cols=106 Identities=16% Similarity=0.325 Sum_probs=86.3
Q ss_pred CCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcC--CCCCeEEEEccCCCC-C----------
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIG--LKCSVEFEVADCTKK-T---------- 344 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~--~~~~i~~~~~d~~~~-~---------- 344 (485)
...++.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++.. ...++++..+|+.+. +
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 44567899999999999999999886 57999999999999999998753 334589999987542 1
Q ss_pred ----CCC--CCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 345 ----YPE--NSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 345 ----~~~--~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+++ ++||+|++.... ++...+++++.++|+|||++++.+..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccccccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 789999997543 45678999999999999999998644
No 424
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.34 E-value=5.1e-12 Score=126.13 Aligned_cols=117 Identities=20% Similarity=0.281 Sum_probs=94.6
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCC-CEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCC--CCCCC
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFD-VHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKT--YPENS 349 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~--~~~~~ 349 (485)
..+...+...++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...+.++.+.++|+...+ +++++
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~ 315 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ 315 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCC
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCC
Confidence 3444556778899999999999999999998763 69999999999999999998755556889999998875 55678
Q ss_pred ccEEEEc------ccccccCCH----------------HHHHHHHHhcCCCCcEEEEEeccc
Q 043471 350 FDVIYSR------DTILHIQDK----------------PALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 350 fD~i~~~------~~~~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
||+|++. +++.+.++. ..+++++.++|||||++++++...
T Consensus 316 fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9999973 334444442 478999999999999999987543
No 425
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.34 E-value=1.3e-12 Score=122.39 Aligned_cols=120 Identities=18% Similarity=0.163 Sum_probs=88.6
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--c-CcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCC--
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--A-GHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTF-- 116 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~-~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~-- 116 (485)
..+...+...++.+|||+|||+|..+..+++. + .+|+|+|+|+.+++.++++... ..+++++++|+......+
T Consensus 73 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 152 (274)
T 3ajd_A 73 MIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLK 152 (274)
T ss_dssp GHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhh
Confidence 33445566778899999999999999999984 4 6999999999999999887532 248999999998732100
Q ss_pred CCCCeeEEEhhh------hhhccC---h-------HHHHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 117 SEDSVDMMFSNW------LLMYLS---D-------KEVEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 117 ~~~~~D~v~~~~------~~~~~~---~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
..++||+|++.. ++.+-+ . ....++++++.++|||||.+++++.+..
T Consensus 153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 257899999762 222100 0 1146899999999999999999876543
No 426
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.33 E-value=4e-13 Score=124.60 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=80.2
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC---CCC-CeEEE--EeeccCCCCCCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG---HFE-NVKFM--CADVTSPDLTFS 117 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~---~~~-~~~~~--~~d~~~~~~~~~ 117 (485)
.++++.....++.+|||||||+|.++..++++ .+|+|+|+|+ |+..+++... ..+ ++.++ ++|+.. ++
T Consensus 64 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--l~-- 137 (265)
T 2oxt_A 64 AWMEERGYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT--LP-- 137 (265)
T ss_dssp HHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT--SC--
T ss_pred HHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH--CC--
Confidence 45555544567889999999999999999988 8999999999 5433222110 011 68999 999987 43
Q ss_pred CCCeeEEEhhhhhhccChHH-----HHHHHHHHHhhcccCc--EEEEEec
Q 043471 118 EDSVDMMFSNWLLMYLSDKE-----VEKLAERMVKWLKVGG--YIFFRES 160 (485)
Q Consensus 118 ~~~~D~v~~~~~~~~~~~~~-----~~~~l~~~~~~L~pgG--~l~~~~~ 160 (485)
+++||+|+|..+ ++.+... ...+++.+.++|+||| .+++...
T Consensus 138 ~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 138 VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 679999999876 4433211 1138899999999999 9988654
No 427
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.33 E-value=2.6e-12 Score=123.09 Aligned_cols=105 Identities=19% Similarity=0.217 Sum_probs=84.0
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC----C-CCCeEEEEccCCCC--CCCCCCccE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG----L-KCSVEFEVADCTKK--TYPENSFDV 352 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~----~-~~~i~~~~~d~~~~--~~~~~~fD~ 352 (485)
...+.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|++++.. + ..+++++.+|+.+. .+++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 4556799999999999999999875 46999999999999999998752 2 35899999998653 234578999
Q ss_pred EEEcccc--cccCC--HHHHHHHHHhcCCCCcEEEEE
Q 043471 353 IYSRDTI--LHIQD--KPALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 353 i~~~~~~--~~~~~--~~~~l~~~~~~LkpgG~l~i~ 385 (485)
|++...- +...+ ...++++++++|+|||++++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9996432 11111 478999999999999999997
No 428
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.33 E-value=4.6e-13 Score=122.18 Aligned_cols=107 Identities=13% Similarity=0.110 Sum_probs=83.5
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCCCC----CC
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTFSE----DS 120 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~~~----~~ 120 (485)
...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|+++.. ...+++++++|+.+....+.+ ++
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3456789999999999999999986 5799999999999999998753 225899999998652101111 68
Q ss_pred eeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 121 VDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 121 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
||+|++... ......+++++.++|+|||.+++.+...
T Consensus 146 ~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 146 FDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred ccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 999998643 2225689999999999999999976543
No 429
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.33 E-value=3.8e-12 Score=113.04 Aligned_cols=106 Identities=29% Similarity=0.352 Sum_probs=80.0
Q ss_pred HHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcCC----------CEEEEEeCCHHHHHHHHHHhcCCCCCeEEE-EccC
Q 043471 273 KEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKFD----------VHVVGIDLSINMISFALERAIGLKCSVEFE-VADC 340 (485)
Q Consensus 273 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~----------~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~-~~d~ 340 (485)
.++.+.+. ++++.+|||+|||+|.++..++++.+ .+|+|+|+|+.+ . ..++++. .+|+
T Consensus 11 ~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~-~~~~~~~~~~d~ 80 (196)
T 2nyu_A 11 LEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P-LEGATFLCPADV 80 (196)
T ss_dssp HHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C-CTTCEEECSCCT
T ss_pred HHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c-CCCCeEEEeccC
Confidence 34444443 57889999999999999999999864 799999999842 1 1367888 8887
Q ss_pred CCCC--------CCCCCccEEEEccccccc----CCH-------HHHHHHHHhcCCCCcEEEEEecc
Q 043471 341 TKKT--------YPENSFDVIYSRDTILHI----QDK-------PALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 341 ~~~~--------~~~~~fD~i~~~~~~~~~----~~~-------~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
...+ +++++||+|++..++++. .+. ..+++++.++|||||++++..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 81 TDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp TSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 6643 335689999997655432 233 47899999999999999998653
No 430
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.33 E-value=4.2e-12 Score=112.04 Aligned_cols=106 Identities=20% Similarity=0.291 Sum_probs=80.8
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCC---
Q 043471 271 TTKEFVAKLD-LKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYP--- 346 (485)
Q Consensus 271 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~--- 346 (485)
++.++.+.+. ++++.+|||+|||+|.++..++++ +.+|+|+|+++.. . ..+++++++|+.+.+..
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~---------~-~~~v~~~~~D~~~~~~~~~~ 80 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME---------E-IAGVRFIRCDIFKETIFDDI 80 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC---------C-CTTCEEEECCTTSSSHHHHH
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc---------c-CCCeEEEEccccCHHHHHHH
Confidence 4455666654 578899999999999999999998 7899999999752 1 23799999999886421
Q ss_pred --------CCCccEEEEccccccc-----------CCHHHHHHHHHhcCCCCcEEEEEec
Q 043471 347 --------ENSFDVIYSRDTILHI-----------QDKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 347 --------~~~fD~i~~~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
.++||+|++....... .....+++.+.++|||||.+++..+
T Consensus 81 ~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 81 DRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 1489999996543211 1135678999999999999998754
No 431
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.33 E-value=5.8e-12 Score=123.27 Aligned_cols=134 Identities=22% Similarity=0.205 Sum_probs=99.8
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC--cEEEEeCChHHHHHHHHHcCCC---CCeEEEEeeccCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG--HVIALDFIDSVIKKNEEVNGHF---ENVKFMCADVTSP 112 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~giD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~ 112 (485)
+.+.....++... ..++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++.... ++++++++|+.+
T Consensus 202 l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~- 279 (373)
T 3tm4_A 202 LKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQ- 279 (373)
T ss_dssp CCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGG-
T ss_pred ccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhh-
Confidence 4455556666666 67788999999999999999999877 9999999999999999875322 479999999998
Q ss_pred CCCCCCCCeeEEEhhhhhhccC------hHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHH
Q 043471 113 DLTFSEDSVDMMFSNWLLMYLS------DKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKV 186 (485)
Q Consensus 113 ~~~~~~~~~D~v~~~~~~~~~~------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (485)
+++++++||+|+++-.+.... ...+..+++++.++| +|+.++++ . .++.+.+.
T Consensus 280 -~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~-~------------------~~~~~~~~ 338 (373)
T 3tm4_A 280 -LSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT-T------------------EKKAIEEA 338 (373)
T ss_dssp -GGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE-S------------------CHHHHHHH
T ss_pred -CCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE-C------------------CHHHHHHH
Confidence 556678999999975433211 111467889999989 44444442 2 35667778
Q ss_pred hhhcceec
Q 043471 187 FKECQIQD 194 (485)
Q Consensus 187 ~~~~~~~~ 194 (485)
+.+.|+..
T Consensus 339 ~~~~G~~~ 346 (373)
T 3tm4_A 339 IAENGFEI 346 (373)
T ss_dssp HHHTTEEE
T ss_pred HHHcCCEE
Confidence 88888753
No 432
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.33 E-value=1.7e-12 Score=122.06 Aligned_cols=109 Identities=19% Similarity=0.192 Sum_probs=85.4
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC------CCCeEEEEeeccCCCCCCCCCCee
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH------FENVKFMCADVTSPDLTFSEDSVD 122 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~D 122 (485)
...++.+|||||||+|..+..+++. ..+|+++|+++.+++.|+++... .++++++.+|+.+. ++..+++||
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-l~~~~~~fD 153 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF-LENVTNTYD 153 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH-HHHCCSCEE
T ss_pred cCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH-HHhCCCCce
Confidence 3456789999999999999999987 46999999999999999998753 36899999998763 112257899
Q ss_pred EEEhhhhhhccChHHH--HHHHHHHHhhcccCcEEEEEec
Q 043471 123 MMFSNWLLMYLSDKEV--EKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 123 ~v~~~~~~~~~~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+|++....++.+.... .++++++.++|+|||.+++...
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 9998654333222212 5899999999999999998643
No 433
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.33 E-value=9.9e-13 Score=124.71 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=82.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCC------CCCeEEEEeeccCCCCCCCCCCeeE
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGH------FENVKFMCADVTSPDLTFSEDSVDM 123 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~D~ 123 (485)
..++.+|||||||+|.++..+++.. .+|+++|+++.+++.|+++... .++++++.+|+.+. ++..+++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~-l~~~~~~fD~ 171 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF-MKQNQDAFDV 171 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-HHTCSSCEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH-HhhCCCCceE
Confidence 4567899999999999999999873 6899999999999999987532 36899999998652 2224578999
Q ss_pred EEhhhhhhccChH--HHHHHHHHHHhhcccCcEEEEEecc
Q 043471 124 MFSNWLLMYLSDK--EVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 124 v~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
|++....+..+.. ...++++++.++|+|||.+++...+
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 9986543322211 1357999999999999999997533
No 434
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.33 E-value=1.5e-12 Score=124.43 Aligned_cols=107 Identities=20% Similarity=0.200 Sum_probs=83.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC------CCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH------FENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
.++.+|||||||+|.++..+++. +.+|+++|+|+.+++.|+++... .++++++++|+.+. ++..+++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~-l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF-LENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH-HHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH-HhhcCCCceEE
Confidence 45689999999999999999987 46999999999999999998654 35899999998652 11235789999
Q ss_pred EhhhhhhccChHHH--HHHHHHHHhhcccCcEEEEEec
Q 043471 125 FSNWLLMYLSDKEV--EKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 125 ~~~~~~~~~~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
++...-+.-+.... .++++++.++|+|||.+++...
T Consensus 194 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 194 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 98643221111111 5899999999999999999643
No 435
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.32 E-value=2.1e-12 Score=114.02 Aligned_cols=107 Identities=21% Similarity=0.347 Sum_probs=78.9
Q ss_pred HHhccCC-CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCC------CC
Q 043471 45 EVLSLLP-PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLT------FS 117 (485)
Q Consensus 45 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~------~~ 117 (485)
++.+.+. ..++.+|||+|||+|..+..+++++.+|+|+|+++.. ..++++++++|+.+.... +.
T Consensus 15 ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---------~~~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 15 FLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---------EIAGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp HHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---------CCTTCEEEECCTTSSSHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---------cCCCeEEEEccccCHHHHHHHHHHhh
Confidence 4444443 3568899999999999999999998899999999852 235899999999874211 11
Q ss_pred ---CCCeeEEEhhhhhhccC---------hHHHHHHHHHHHhhcccCcEEEEEec
Q 043471 118 ---EDSVDMMFSNWLLMYLS---------DKEVEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 118 ---~~~~D~v~~~~~~~~~~---------~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
.++||+|+|........ ......+++.+.++|||||.+++...
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 14899999965332111 11245788999999999999998654
No 436
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.32 E-value=1e-12 Score=125.51 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=84.1
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC-------CCCeEEEEeeccCCCCCCCCCCeeE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH-------FENVKFMCADVTSPDLTFSEDSVDM 123 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~D~ 123 (485)
.++.+|||||||+|..+..+++. +.+|+++|+++.+++.|+++... .++++++.+|+.+. ++..+++||+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~-l~~~~~~fD~ 154 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY-LERTEERYDV 154 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH-HHHCCCCEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH-HHhcCCCccE
Confidence 45689999999999999999987 56899999999999999987531 36899999998763 2223678999
Q ss_pred EEhhhhhhc---cChHH--HHHHHHHHHhhcccCcEEEEEe
Q 043471 124 MFSNWLLMY---LSDKE--VEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 124 v~~~~~~~~---~~~~~--~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
|++....++ .+... ..++++++.++|+|||.+++..
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 999765443 11111 2589999999999999999964
No 437
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.32 E-value=1.4e-12 Score=119.43 Aligned_cols=105 Identities=24% Similarity=0.272 Sum_probs=83.4
Q ss_pred CCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCCCCC-C-----CC
Q 043471 51 PPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSPDLT-F-----SE 118 (485)
Q Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~~~~-~-----~~ 118 (485)
...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|+++... .++++++++|+.+. ++ + ++
T Consensus 67 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-l~~l~~~~~~~ 145 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA-LDNLLQGQESE 145 (237)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH-HHHHHHSTTCT
T ss_pred HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-HHHHHhccCCC
Confidence 3456779999999999999999987 67999999999999999987532 23699999998652 11 1 25
Q ss_pred CCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 119 DSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 119 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
++||+|++... ......+++++.++|+|||++++....
T Consensus 146 ~~fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 146 GSYDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp TCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CCcCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 78999997632 223678999999999999999986543
No 438
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.31 E-value=9.5e-12 Score=114.29 Aligned_cols=94 Identities=22% Similarity=0.351 Sum_probs=76.5
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~ 117 (485)
.+....+.+++.+...++.+|||||||+|.++..|++++.+|+|+|+|+.+++.++++....++++++++|+.+.+ ++
T Consensus 14 ~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~--~~ 91 (244)
T 1qam_A 14 TSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFK--FP 91 (244)
T ss_dssp CCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCC--CC
T ss_pred CCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCC--cc
Confidence 5667788899999888899999999999999999999999999999999999999998765568999999998844 44
Q ss_pred C-CCeeEEEhhhhhhccCh
Q 043471 118 E-DSVDMMFSNWLLMYLSD 135 (485)
Q Consensus 118 ~-~~~D~v~~~~~~~~~~~ 135 (485)
+ ..| .|+++. .+++..
T Consensus 92 ~~~~~-~vv~nl-Py~~~~ 108 (244)
T 1qam_A 92 KNQSY-KIFGNI-PYNIST 108 (244)
T ss_dssp SSCCC-EEEEEC-CGGGHH
T ss_pred cCCCe-EEEEeC-CcccCH
Confidence 3 345 455543 344433
No 439
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.31 E-value=4.7e-12 Score=119.94 Aligned_cols=100 Identities=21% Similarity=0.220 Sum_probs=76.0
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLT 115 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~ 115 (485)
.++.....+++.+...++.+|||||||+|.++..|++++.+|+|+|+++.+++.++++.. ..++++++++|+.+.+
T Consensus 26 ~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-- 103 (299)
T 2h1r_A 26 KNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-- 103 (299)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC--
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC--
Confidence 466777888888888888999999999999999999999999999999999999998752 2368999999998743
Q ss_pred CCCCCeeEEEhhhhhhccChHHHHHHH
Q 043471 116 FSEDSVDMMFSNWLLMYLSDKEVEKLA 142 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~~~~~~~~~l 142 (485)
+ ++||+|+++.. +++..+....++
T Consensus 104 ~--~~~D~Vv~n~p-y~~~~~~~~~ll 127 (299)
T 2h1r_A 104 F--PKFDVCTANIP-YKISSPLIFKLI 127 (299)
T ss_dssp C--CCCSEEEEECC-GGGHHHHHHHHH
T ss_pred c--ccCCEEEEcCC-cccccHHHHHHH
Confidence 2 48999999754 444443333343
No 440
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.31 E-value=1.8e-11 Score=109.88 Aligned_cols=137 Identities=15% Similarity=0.144 Sum_probs=102.2
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEccccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTIL 360 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~ 360 (485)
.+..+|||||||+|.++..++... ..+|+++|+++.|++.+++++..++.+..+.+.|....+ +.++||+|++.-+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHH
Confidence 446699999999999999888774 679999999999999999999877777889999998766 458899999999999
Q ss_pred ccCC--HHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEe
Q 043471 361 HIQD--KPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFVDIIAE 430 (485)
Q Consensus 361 ~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 430 (485)
|+++ ....+ ++.+.|+|+|.++-... +.-......+... -...|.+.+.+.|..+-.++
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~-ksl~Grs~gm~~~---------Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPT-KSLGQRSKGMFQN---------YSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEEC-C-------CHHHH---------HHHHHHHHHHHHTCCEEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccc-hhhcCCCcchhhH---------HHHHHHHHHHhcCCceeeee
Confidence 9954 33455 89999999998766543 1111111111111 14578888888888655443
No 441
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.31 E-value=2.6e-12 Score=117.12 Aligned_cols=105 Identities=17% Similarity=0.241 Sum_probs=85.8
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCC--CCCC----CCc
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKK--TYPE----NSF 350 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~--~~~~----~~f 350 (485)
..++.+|||+|||+|..+..+++.+ +.+++++|+++.+++.|++++. +...++++..+|+.+. .++. ++|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 4567799999999999999999875 5799999999999999999875 3345899999987543 1111 689
Q ss_pred cEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 351 DVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 351 D~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
|+|++... ..+...+++++.++|+|||.+++.+..
T Consensus 147 D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 147 DVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred cEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 99999654 346788999999999999999997654
No 442
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.31 E-value=1.3e-12 Score=122.74 Aligned_cols=110 Identities=18% Similarity=0.273 Sum_probs=83.2
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhh-cCcEEEEeCChHHHHHHHHHcCC--C-CCeEEEEeeccCCCCCCCCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK-AGHVIALDFIDSVIKKNEEVNGH--F-ENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~~~~a~~~~~~--~-~~~~~~~~d~~~~~~~~~~~ 119 (485)
..+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|+++... . .+++++++|+.+. + + +
T Consensus 113 ~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~--~-~ 188 (284)
T 1nv8_A 113 ELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-F--K-E 188 (284)
T ss_dssp HHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-G--G-G
T ss_pred HHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-c--c-c
Confidence 34455444346679999999999999999998 77999999999999999987532 2 2599999999762 2 2 5
Q ss_pred Ce---eEEEhhh------------hhhccChHH------HHHHHHHHH-hhcccCcEEEEE
Q 043471 120 SV---DMMFSNW------------LLMYLSDKE------VEKLAERMV-KWLKVGGYIFFR 158 (485)
Q Consensus 120 ~~---D~v~~~~------------~~~~~~~~~------~~~~l~~~~-~~L~pgG~l~~~ 158 (485)
+| |+|+++- +. |-+... ...+++++. +.|+|||.+++.
T Consensus 189 ~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 189 KFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp GTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred ccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 78 9999971 11 222210 126899999 999999999984
No 443
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.30 E-value=1.7e-12 Score=123.44 Aligned_cols=106 Identities=18% Similarity=0.186 Sum_probs=80.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC------CCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH------FENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.|+++... .++++++.+|+.+. ++..+++||+|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~-l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF-LKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH-HHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH-HHhcCCCceEE
Confidence 45679999999999999999987 46999999999999999998753 35899999998752 22245789999
Q ss_pred EhhhhhhccChHHH--HHHHHHHHhhcccCcEEEEEe
Q 043471 125 FSNWLLMYLSDKEV--EKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 125 ~~~~~~~~~~~~~~--~~~l~~~~~~L~pgG~l~~~~ 159 (485)
++...-+..+.... .++++++.++|+|||.+++..
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98653222222111 689999999999999999964
No 444
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.30 E-value=1.9e-13 Score=126.01 Aligned_cols=118 Identities=19% Similarity=0.198 Sum_probs=91.7
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~ 117 (485)
.+......+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++....++++++++|+.+. +++
T Consensus 13 ~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~--~~~ 90 (245)
T 1yub_A 13 TSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQF--QFP 90 (245)
T ss_dssp CCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTT--TCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhc--Ccc
Confidence 456777889999988889999999999999999999999999999999999999888765446899999999884 444
Q ss_pred C-CCeeEEEhhhhhhccChHHHHH----------HH----HHHHhhcccCcEEEEEe
Q 043471 118 E-DSVDMMFSNWLLMYLSDKEVEK----------LA----ERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 118 ~-~~~D~v~~~~~~~~~~~~~~~~----------~l----~~~~~~L~pgG~l~~~~ 159 (485)
+ ++| .|+++- .++........ ++ +.+.|+|+|||.+.+..
T Consensus 91 ~~~~f-~vv~n~-Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 91 NKQRY-KIVGNI-PYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CSSEE-EEEEEC-CSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cCCCc-EEEEeC-CccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 3 678 666652 23333222222 33 66899999999987743
No 445
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.30 E-value=5.4e-12 Score=118.81 Aligned_cols=103 Identities=19% Similarity=0.200 Sum_probs=83.7
Q ss_pred CEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCC-CCCeEEEEccCCCC--CCCCCCccEEEEccccc
Q 043471 285 QKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGL-KCSVEFEVADCTKK--TYPENSFDVIYSRDTIL 360 (485)
Q Consensus 285 ~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~-~~~i~~~~~d~~~~--~~~~~~fD~i~~~~~~~ 360 (485)
.+|||||||+|.++..+++.+ +.+++++|+++.+++.|++++... ..+++++.+|+.+. .+++++||+|++.....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 499999999999999999855 679999999999999999998643 35899999998664 34467899999964322
Q ss_pred cc-C---CHHHHHHHHHhcCCCCcEEEEEec
Q 043471 361 HI-Q---DKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 361 ~~-~---~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
.. + ...+++++++++|+|||.+++...
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 21 1 136899999999999999998864
No 446
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.30 E-value=3e-12 Score=118.71 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=77.7
Q ss_pred HHhccCCC--CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC---CCCeEEEEeeccCC-CCCC
Q 043471 45 EVLSLLPP--YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH---FENVKFMCADVTSP-DLTF 116 (485)
Q Consensus 45 ~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~~-~~~~ 116 (485)
.+++.+.. .++.+|||+|||+|.++..++++ +.+|+|+|+|+.|++.|+++... ..+++++++|+.+. .-++
T Consensus 54 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 133 (254)
T 2h00_A 54 DLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDAL 133 (254)
T ss_dssp HHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTS
T ss_pred HHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhh
Confidence 34444443 25779999999999999999876 67999999999999999987532 23599999998762 1133
Q ss_pred C---CCCeeEEEhhhhhhccC-h------------HHHHHHHHHHHhhcccCcEEEEE
Q 043471 117 S---EDSVDMMFSNWLLMYLS-D------------KEVEKLAERMVKWLKVGGYIFFR 158 (485)
Q Consensus 117 ~---~~~~D~v~~~~~~~~~~-~------------~~~~~~l~~~~~~L~pgG~l~~~ 158 (485)
+ +++||+|+++-.+++.. + .....++.+++++|||||.+.+.
T Consensus 134 ~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 134 KEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp TTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred hcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 3 26899999985444332 0 01234567888899999987664
No 447
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.30 E-value=1.2e-11 Score=124.26 Aligned_cols=117 Identities=20% Similarity=0.221 Sum_probs=91.1
Q ss_pred HHcCCC--CCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCC-CCCCc
Q 043471 277 AKLDLK--PGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTY-PENSF 350 (485)
Q Consensus 277 ~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~-~~~~f 350 (485)
..+... ++.+|||+|||+|..+..+++.. +..|+++|+|+.+++.+++++...+ .++.+.++|+..++. .+++|
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~f 188 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMF 188 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCE
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccC
Confidence 344555 89999999999999999999876 3699999999999999999986433 378999999987653 35789
Q ss_pred cEEEEc------ccccccCC----------------HHHHHHHHHhcCCCCcEEEEEecccCCCC
Q 043471 351 DVIYSR------DTILHIQD----------------KPALFKSFFKWLKPGGTVLISDYCKSFGT 393 (485)
Q Consensus 351 D~i~~~------~~~~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 393 (485)
|+|++. .++.+.++ ...+|+++.++|||||++++++.......
T Consensus 189 D~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~E 253 (479)
T 2frx_A 189 DAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEE 253 (479)
T ss_dssp EEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTT
T ss_pred CEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCccc
Confidence 999983 22333222 24689999999999999999876544433
No 448
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.30 E-value=5.9e-12 Score=118.34 Aligned_cols=107 Identities=19% Similarity=0.145 Sum_probs=85.1
Q ss_pred CCCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCC-----CCCeEEEEccCCCC-CCCCCCccE
Q 043471 280 DLKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGL-----KCSVEFEVADCTKK-TYPENSFDV 352 (485)
Q Consensus 280 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~-----~~~i~~~~~d~~~~-~~~~~~fD~ 352 (485)
...++.+|||||||+|.++..+++.. ..+++++|+++.+++.|++++... ..+++++.+|+.+. +..+++||+
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred cCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 34456799999999999999999875 469999999999999999988643 35899999998653 222578999
Q ss_pred EEEcccccccC--CH--HHHHHHHHhcCCCCcEEEEEe
Q 043471 353 IYSRDTILHIQ--DK--PALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 353 i~~~~~~~~~~--~~--~~~l~~~~~~LkpgG~l~i~~ 386 (485)
|++.....+.+ .. .+++++++++|+|||.+++..
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 99954332222 11 689999999999999999884
No 449
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.29 E-value=4.1e-12 Score=119.11 Aligned_cols=104 Identities=21% Similarity=0.237 Sum_probs=85.0
Q ss_pred CccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCC
Q 043471 36 SDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLT 115 (485)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~ 115 (485)
+-.+....+.+++.+...++.+|||||||+|.++..|++++.+|+|+|+++.+++.++++....++++++++|+.+. +
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~--~ 109 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV--D 109 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS--C
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC--C
Confidence 33566788899999998899999999999999999999999999999999999999998875456899999999884 4
Q ss_pred CCCCCeeEEEhhhhhhccChHHHHHHH
Q 043471 116 FSEDSVDMMFSNWLLMYLSDKEVEKLA 142 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~~~~~~~~~l 142 (485)
+++.+||+|+++. .+++..+....++
T Consensus 110 ~~~~~fD~Iv~Nl-Py~is~pil~~lL 135 (295)
T 3gru_A 110 LNKLDFNKVVANL-PYQISSPITFKLI 135 (295)
T ss_dssp GGGSCCSEEEEEC-CGGGHHHHHHHHH
T ss_pred cccCCccEEEEeC-cccccHHHHHHHH
Confidence 5667899999874 4455543333333
No 450
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.29 E-value=3.6e-12 Score=121.12 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=81.1
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCC-----CCCeEEEEccCCCC-CCCCCCccEEE
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGL-----KCSVEFEVADCTKK-TYPENSFDVIY 354 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~-----~~~i~~~~~d~~~~-~~~~~~fD~i~ 354 (485)
..+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++... ..+++++.+|+.+. +..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 345799999999999999999875 469999999999999999998643 45799999998652 22457899999
Q ss_pred Eccccccc-CCH----HHHHHHHHhcCCCCcEEEEEe
Q 043471 355 SRDTILHI-QDK----PALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 355 ~~~~~~~~-~~~----~~~l~~~~~~LkpgG~l~i~~ 386 (485)
+... .+. +.. ..++++++++|+|||.+++..
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8553 232 111 688999999999999999874
No 451
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.28 E-value=5.9e-12 Score=119.33 Aligned_cols=107 Identities=20% Similarity=0.167 Sum_probs=83.2
Q ss_pred CCCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC----C-CCCeEEEEccCCC-CCCCCCCccEE
Q 043471 281 LKPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG----L-KCSVEFEVADCTK-KTYPENSFDVI 353 (485)
Q Consensus 281 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~----~-~~~i~~~~~d~~~-~~~~~~~fD~i 353 (485)
...+.+|||||||+|.++..+++.. ..+++++|+++.+++.|++++.. + ..+++++.+|+.+ ++..+++||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3456799999999999999999875 36999999999999999998743 2 4589999999865 23345789999
Q ss_pred EEcccccccC----CHHHHHHHHHhcCCCCcEEEEEec
Q 043471 354 YSRDTILHIQ----DKPALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 354 ~~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~i~~~ 387 (485)
++.......+ ...+++++++++|+|||.+++...
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 9965432211 235789999999999999998753
No 452
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.28 E-value=7.6e-12 Score=115.87 Aligned_cols=96 Identities=11% Similarity=0.005 Sum_probs=81.6
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcC-----CCCCeEEEEccCCCCCCCCCCccEEEEc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIG-----LKCSVEFEVADCTKKTYPENSFDVIYSR 356 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~-----~~~~i~~~~~d~~~~~~~~~~fD~i~~~ 356 (485)
..+.+|||||||+|.++..+++. +.+++++|+++.+++.|++++.. ...+++++.+|+.+.. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 34579999999999999999988 58999999999999999887643 1357999999988754 789999986
Q ss_pred ccccccCCHHHHHHHHHhcCCCCcEEEEEe
Q 043471 357 DTILHIQDKPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 357 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
..++..++++++++|+|||.+++..
T Consensus 147 -----~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 -----QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 3466779999999999999999863
No 453
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.28 E-value=4.7e-12 Score=120.82 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=85.0
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcC-----C-CCCeEEEEccCCCC-CCCCCCccEE
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIG-----L-KCSVEFEVADCTKK-TYPENSFDVI 353 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~-----~-~~~i~~~~~d~~~~-~~~~~~fD~i 353 (485)
..+.+|||||||+|.++..+++.. ..+++++|+++.+++.|++++.. + ..+++++.+|+.+. +..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 455799999999999999999875 46999999999999999998742 2 35899999998763 3346789999
Q ss_pred EEcccccc-cCC------HHHHHHHHHhcCCCCcEEEEEe
Q 043471 354 YSRDTILH-IQD------KPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 354 ~~~~~~~~-~~~------~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
++....++ ... ..+++++++++|||||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99765543 111 4789999999999999999874
No 454
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.28 E-value=9.3e-12 Score=124.90 Aligned_cols=120 Identities=20% Similarity=0.260 Sum_probs=92.5
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhh--c-CcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCCCCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK--A-GHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLTFSE 118 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~-~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~~~~ 118 (485)
..+...+...++.+|||+|||+|..+..+++. + .+|+|+|+|+.+++.++++.. ...+++++++|+...+..+++
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 328 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGE 328 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCS
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhcc
Confidence 33445566778899999999999999999986 3 689999999999999988753 234799999999874322455
Q ss_pred CCeeEEEh------hhhhhccChHH--------------HHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 119 DSVDMMFS------NWLLMYLSDKE--------------VEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 119 ~~~D~v~~------~~~~~~~~~~~--------------~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
++||+|++ .+++++.++.. ...+++++.++|||||.+++++.+..
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 78999995 34455444321 15789999999999999999877543
No 455
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.28 E-value=3.1e-12 Score=120.19 Aligned_cols=106 Identities=19% Similarity=0.191 Sum_probs=81.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhc-CcEEEEeCChHHHHHHHHHc----C--------CCCCeEEEEeeccCCCCCCCCC
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKA-GHVIALDFIDSVIKKNEEVN----G--------HFENVKFMCADVTSPDLTFSED 119 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~~~~a~~~~----~--------~~~~~~~~~~d~~~~~~~~~~~ 119 (485)
.++.+|||||||+|.++..+++.+ .+|+++|+++.+++.|+++. + ..++++++.+|+.+. ++. ++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~-l~~-~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF-IKN-NR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH-HHH-CC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH-hcc-cC
Confidence 457899999999999999999884 48999999999999999886 1 135899999998652 112 57
Q ss_pred CeeEEEhhhhhhccChHH--HHHHHHHHHhhcccCcEEEEEec
Q 043471 120 SVDMMFSNWLLMYLSDKE--VEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
+||+|++....+..+... ..++++++.++|+|||.+++...
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 899999865432222111 25799999999999999999643
No 456
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.28 E-value=3.1e-12 Score=120.97 Aligned_cols=106 Identities=16% Similarity=0.079 Sum_probs=80.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCC------CCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGH------FENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.|+++... .++++++.+|+.+. ++..+++||+|
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-l~~~~~~fD~I 167 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY-VRKFKNEFDVI 167 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-GGGCSSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-HhhCCCCceEE
Confidence 45689999999999999999987 46999999999999999987521 36899999998653 22235789999
Q ss_pred EhhhhhhccChH---HHHHHHHHHHhhcccCcEEEEEe
Q 043471 125 FSNWLLMYLSDK---EVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 125 ~~~~~~~~~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
++...-++.... ...++++++.++|+|||.+++..
T Consensus 168 i~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 168 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 986432212211 02589999999999999999964
No 457
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.28 E-value=3.4e-12 Score=113.35 Aligned_cols=100 Identities=24% Similarity=0.343 Sum_probs=75.2
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhh-c----------CcEEEEeCChHHHHHHHHHcCCCCCeEEE-EeeccCCCC-----
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKK-A----------GHVIALDFIDSVIKKNEEVNGHFENVKFM-CADVTSPDL----- 114 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~giD~s~~~~~~a~~~~~~~~~~~~~-~~d~~~~~~----- 114 (485)
..++.+|||+|||+|.++..++++ + .+|+|+|+|+.+ ...+++++ ++|+...+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------cCCCCeEEEeccCCCHHHHHHHH
Confidence 356789999999999999999987 4 689999999842 12578899 888765321
Q ss_pred -CCCCCCeeEEEhhhhhhc----cChHH-----HHHHHHHHHhhcccCcEEEEEec
Q 043471 115 -TFSEDSVDMMFSNWLLMY----LSDKE-----VEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 115 -~~~~~~~D~v~~~~~~~~----~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
.+++++||+|+|..+++. ..+.. ...+++++.++|+|||.+++...
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 134568999998664443 22211 14789999999999999999754
No 458
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.28 E-value=5.4e-12 Score=115.58 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=85.2
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhc--CCCCCeEEEEccCCCC-C-C-----CCCCc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAI--GLKCSVEFEVADCTKK-T-Y-----PENSF 350 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~--~~~~~i~~~~~d~~~~-~-~-----~~~~f 350 (485)
.++.+|||||||+|..+..+++.. +.+++++|+++.+++.|++++. ++..++++..+|+.+. + + +.++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 456799999999999999999875 5799999999999999999876 4445799999988653 1 1 25789
Q ss_pred cEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 351 DVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 351 D~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
|+|++... ..+...+++++.++|+|||.+++.+..
T Consensus 149 D~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 149 DFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 99998643 246788999999999999999987643
No 459
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.27 E-value=3.4e-12 Score=119.39 Aligned_cols=106 Identities=18% Similarity=0.141 Sum_probs=82.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhh-c-CcEEEEeCChHHHHHHHHHcC------CCCCeEEEEeeccCCCCCCCCCCeeEE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKK-A-GHVIALDFIDSVIKKNEEVNG------HFENVKFMCADVTSPDLTFSEDSVDMM 124 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~giD~s~~~~~~a~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~D~v 124 (485)
.++.+|||||||+|.++..+++. + .+|+++|+++.+++.|+++.. ..++++++.+|+.+. ++..+++||+|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~-l~~~~~~fD~I 152 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH-IAKSENQYDVI 152 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH-HHTCCSCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-HhhCCCCeeEE
Confidence 45789999999999999999987 4 699999999999999998751 236899999998652 22235789999
Q ss_pred EhhhhhhccChHH--HHHHHHHHHhhcccCcEEEEEe
Q 043471 125 FSNWLLMYLSDKE--VEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 125 ~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
++....++.+... ..++++++.++|+|||.+++..
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9965432222100 1479999999999999999964
No 460
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.27 E-value=1e-11 Score=116.17 Aligned_cols=104 Identities=22% Similarity=0.196 Sum_probs=83.4
Q ss_pred CCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc----CC-CCCeEEEEccCCCC-CCCCCCccEEEE
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI----GL-KCSVEFEVADCTKK-TYPENSFDVIYS 355 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~----~~-~~~i~~~~~d~~~~-~~~~~~fD~i~~ 355 (485)
.+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++. ++ ..+++++.+|+.+. +..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 46799999999999999999875 3699999999999999999873 23 35899999998652 333578999999
Q ss_pred cccccccCC----HHHHHHHHHhcCCCCcEEEEEe
Q 043471 356 RDTILHIQD----KPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 356 ~~~~~~~~~----~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
.......+. ..+++++++++|+|||.+++..
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 654322211 3689999999999999999874
No 461
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.27 E-value=4.4e-12 Score=126.04 Aligned_cols=115 Identities=19% Similarity=0.212 Sum_probs=89.9
Q ss_pred HHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCC-CCCCCccE
Q 043471 276 VAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKT-YPENSFDV 352 (485)
Q Consensus 276 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~ 352 (485)
...+...++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.+++++...+..+.+.++|+.+++ +..++||+
T Consensus 94 a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~ 173 (464)
T 3m6w_A 94 GVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHR 173 (464)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEE
T ss_pred HHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCE
Confidence 344567889999999999999999999876 269999999999999999998744433888888887654 23578999
Q ss_pred EEEc------ccccccCCH----------------HHHHHHHHhcCCCCcEEEEEecccC
Q 043471 353 IYSR------DTILHIQDK----------------PALFKSFFKWLKPGGTVLISDYCKS 390 (485)
Q Consensus 353 i~~~------~~~~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~~~~ 390 (485)
|++. .++.+-++. ..+++++.++|||||++++++....
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 9962 223332332 6789999999999999999865443
No 462
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.27 E-value=2.3e-11 Score=112.86 Aligned_cols=133 Identities=16% Similarity=0.147 Sum_probs=96.3
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc-CcEEEEeCChHHHHHHHHHc---CCCCCeEEEEeeccCCCCC
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA-GHVIALDFIDSVIKKNEEVN---GHFENVKFMCADVTSPDLT 115 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~~~~a~~~~---~~~~~~~~~~~d~~~~~~~ 115 (485)
..++.++.+.+ .+|.+|||+|||+|.+++.++++| .+|+++|++|.+++.++++. +-.++++++++|+.++.
T Consensus 113 ~~er~ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-- 188 (278)
T 3k6r_A 113 VKERVRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-- 188 (278)
T ss_dssp HHHHHHHHHHC--CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--
T ss_pred HHHHHHHHHhc--CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc--
Confidence 34566666664 458899999999999999999987 58999999999999998864 33357999999998743
Q ss_pred CCCCCeeEEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEEEeccCCCCCccccCCCCCCCCChhHHHHHhhhcce
Q 043471 116 FSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQI 192 (485)
Q Consensus 116 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (485)
..+.||.|+++.. +. ...++..+.++|+|||+|.+.+...... ..-...+.+++..++.|+
T Consensus 189 -~~~~~D~Vi~~~p--~~----~~~~l~~a~~~lk~gG~ih~~~~~~e~~---------~~~~~~e~i~~~~~~~g~ 249 (278)
T 3k6r_A 189 -GENIADRILMGYV--VR----THEFIPKALSIAKDGAIIHYHNTVPEKL---------MPREPFETFKRITKEYGY 249 (278)
T ss_dssp -CCSCEEEEEECCC--SS----GGGGHHHHHHHEEEEEEEEEEEEEEGGG---------TTTTTHHHHHHHHHHTTC
T ss_pred -cccCCCEEEECCC--Cc----HHHHHHHHHHHcCCCCEEEEEeeecccc---------cchhHHHHHHHHHHHcCC
Confidence 4678999987631 21 2257888889999999988765432110 001133556666666665
No 463
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.27 E-value=6e-12 Score=119.18 Aligned_cols=111 Identities=16% Similarity=0.174 Sum_probs=80.3
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeC----CHHHHHHHHHHhcCC-CCCeEEEEc-cCCCCC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDL----SINMISFALERAIGL-KCSVEFEVA-DCTKKT 344 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~----s~~~~~~a~~~~~~~-~~~i~~~~~-d~~~~~ 344 (485)
.+..+++...++++.+|||+|||+|.++..++++ .+|+|+|+ ++.+++.+. .... ..++.+..+ |+..++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 70 KLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP 145 (305)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC
Confidence 3445566645678899999999999999999988 48999999 565442211 1111 136888888 887765
Q ss_pred CCCCCccEEEEccccc---ccCCHH---HHHHHHHhcCCCCcEEEEEec
Q 043471 345 YPENSFDVIYSRDTIL---HIQDKP---ALFKSFFKWLKPGGTVLISDY 387 (485)
Q Consensus 345 ~~~~~fD~i~~~~~~~---~~~~~~---~~l~~~~~~LkpgG~l~i~~~ 387 (485)
.++||+|+|..++. +..+.. .+|+.+.++|||||.+++..+
T Consensus 146 --~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 146 --PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp --CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred --cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 57899999976653 222222 578999999999999988654
No 464
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.27 E-value=1.9e-12 Score=122.67 Aligned_cols=110 Identities=10% Similarity=0.046 Sum_probs=76.9
Q ss_pred HhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeC----ChHHHHHHHHHcCCCCCeEEEEe-eccCCCCCCCCCC
Q 043471 46 VLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDF----IDSVIKKNEEVNGHFENVKFMCA-DVTSPDLTFSEDS 120 (485)
Q Consensus 46 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~----s~~~~~~a~~~~~~~~~~~~~~~-d~~~~~~~~~~~~ 120 (485)
+++.....++.+|||||||+|.++..++++ .+|+|+|+ ++.+++.++......+++.++++ |+.. + +.++
T Consensus 74 i~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~--l--~~~~ 148 (305)
T 2p41_A 74 FVERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFF--I--PPER 148 (305)
T ss_dssp HHHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTT--S--CCCC
T ss_pred HHHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEecccccc--C--CcCC
Confidence 344433456789999999999999999998 68999999 66544221111001147999998 8876 3 3468
Q ss_pred eeEEEhhhhhh---ccChHH-HHHHHHHHHhhcccCcEEEEEec
Q 043471 121 VDMMFSNWLLM---YLSDKE-VEKLAERMVKWLKVGGYIFFRES 160 (485)
Q Consensus 121 ~D~v~~~~~~~---~~~~~~-~~~~l~~~~~~L~pgG~l~~~~~ 160 (485)
||+|+|..++. +..+.. ...++..+.++|||||.+++...
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 99999976653 222211 12588999999999999988543
No 465
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.26 E-value=6.9e-12 Score=119.85 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=83.3
Q ss_pred CCCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhcCC-----CCCeEEEEccCCCC-CCCCCCccEEE
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAIGL-----KCSVEFEVADCTKK-TYPENSFDVIY 354 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~-----~~~i~~~~~d~~~~-~~~~~~fD~i~ 354 (485)
.++.+|||||||+|.++..+++.. +.+|+++|+|+.+++.|++++... ..+++++.+|+.+. +..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 345799999999999999999875 579999999999999999997642 35799999997653 22357899999
Q ss_pred Ecccccc--cCC--HHHHHHHHHhcCCCCcEEEEEe
Q 043471 355 SRDTILH--IQD--KPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 355 ~~~~~~~--~~~--~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
+...-.. ... ..+++++++++|+|||++++..
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8643111 111 1789999999999999999974
No 466
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.26 E-value=4.2e-12 Score=124.66 Aligned_cols=121 Identities=17% Similarity=0.084 Sum_probs=86.6
Q ss_pred hhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcC--CC-C-CeEEEEeeccCCC-
Q 043471 40 KEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNG--HF-E-NVKFMCADVTSPD- 113 (485)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~--~~-~-~~~~~~~d~~~~~- 113 (485)
....+.++..+. .++.+|||+|||+|.+++.+++.++ +|+|+|+|+.+++.|+++.. .. + +++++++|+.+..
T Consensus 199 ~~~~~~~~~~~~-~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~ 277 (385)
T 2b78_A 199 QRQVRNELINGS-AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFK 277 (385)
T ss_dssp GHHHHHHHHHTT-TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHH
Confidence 333334443332 4678999999999999999999765 89999999999999998643 22 2 8999999987621
Q ss_pred -CCCCCCCeeEEEhhhhh-----hccCh--HHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 114 -LTFSEDSVDMMFSNWLL-----MYLSD--KEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 114 -~~~~~~~~D~v~~~~~~-----~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+.....+||+|++.-.. .+..+ ..+.+++..+.++|+|||+++++...
T Consensus 278 ~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 278 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 11113589999984221 12221 22567888899999999999997653
No 467
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.25 E-value=1.2e-11 Score=119.83 Aligned_cols=115 Identities=21% Similarity=0.241 Sum_probs=90.3
Q ss_pred HHHHHHc-CCCCCCEEEEECCCCChhHHHHhhcCC------CEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCC
Q 043471 273 KEFVAKL-DLKPGQKVLDVGCGIGGGDFYMADKFD------VHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTY 345 (485)
Q Consensus 273 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~ 345 (485)
..+++.+ ...++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.++...+.++.+.++|.... .
T Consensus 119 ~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~ 197 (344)
T 2f8l_A 119 AYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-L 197 (344)
T ss_dssp HHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-C
T ss_pred HHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-c
Confidence 4445444 345678999999999999998887652 6899999999999999998753333688999998764 3
Q ss_pred CCCCccEEEEcccccccCCH------------------HHHHHHHHhcCCCCcEEEEEecc
Q 043471 346 PENSFDVIYSRDTILHIQDK------------------PALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 346 ~~~~fD~i~~~~~~~~~~~~------------------~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+.++||+|+++..+.+++.. ..+++.+.+.|+|||++++..+.
T Consensus 198 ~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 198 LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 45789999999887666432 25799999999999999988643
No 468
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=8.5e-12 Score=122.18 Aligned_cols=118 Identities=14% Similarity=0.209 Sum_probs=84.2
Q ss_pred hhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCCCCCCCCC
Q 043471 42 ERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPDLTFSEDS 120 (485)
Q Consensus 42 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~~~~ 120 (485)
..+.++..+. .+|.+|||+|||+|.+++.+++.|+.|+|+|+|+.+++.|+++....+ ..++.++|+.+. ++...+.
T Consensus 203 ~~r~~l~~~~-~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~-l~~~~~~ 280 (393)
T 4dmg_A 203 ENRRLFEAMV-RPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPT-LRGLEGP 280 (393)
T ss_dssp HHHHHHHTTC-CTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHH-HHTCCCC
T ss_pred HHHHHHHHHh-cCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHH-HHHhcCC
Confidence 3344444332 258899999999999999999998889999999999999998743211 235778888763 1111344
Q ss_pred eeEEEhhhhhhccC--------hHHHHHHHHHHHhhcccCcEEEEEeccC
Q 043471 121 VDMMFSNWLLMYLS--------DKEVEKLAERMVKWLKVGGYIFFRESCF 162 (485)
Q Consensus 121 ~D~v~~~~~~~~~~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (485)
||+|++.-.. +.. .....+++..+.++|+|||++++.+...
T Consensus 281 fD~Ii~dpP~-f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 281 FHHVLLDPPT-LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp EEEEEECCCC-CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCEEEECCCc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9999986321 111 1225688999999999999999766543
No 469
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.25 E-value=1.1e-11 Score=117.34 Aligned_cols=104 Identities=20% Similarity=0.154 Sum_probs=81.3
Q ss_pred CCCEEEEECCCCChhHHHHhhcC-CCEEEEEeCCHHHHHHHHHHhc----CC-CCCeEEEEccCCCC-CCCCCCccEEEE
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKF-DVHVVGIDLSINMISFALERAI----GL-KCSVEFEVADCTKK-TYPENSFDVIYS 355 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~----~~-~~~i~~~~~d~~~~-~~~~~~fD~i~~ 355 (485)
.+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++. +. ..+++++.+|+.+. +..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 45799999999999999999875 4699999999999999999873 22 35899999997652 333578999998
Q ss_pred cccccccC-----CHHHHHHHHHhcCCCCcEEEEEe
Q 043471 356 RDTILHIQ-----DKPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 356 ~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
...-.++. ...+++++++++|+|||.+++..
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 54321121 23789999999999999999974
No 470
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.25 E-value=1.4e-11 Score=122.95 Aligned_cols=126 Identities=16% Similarity=0.245 Sum_probs=94.0
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCCCC-CeEEEEeeccCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGHFE-NVKFMCADVTSPDL 114 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~ 114 (485)
.+......+...+...++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.++++....+ ++.++++|+...+.
T Consensus 230 ~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~ 309 (429)
T 1sqg_A 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ 309 (429)
T ss_dssp ECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH
T ss_pred eeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh
Confidence 333344445556677888999999999999999999874 699999999999999988754222 58999999887421
Q ss_pred CCCCCCeeEEEh------hhhhhccChHH--------------HHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 115 TFSEDSVDMMFS------NWLLMYLSDKE--------------VEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 115 ~~~~~~~D~v~~------~~~~~~~~~~~--------------~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
.+++++||+|++ .+++.+.++.. ...+++++.++|||||++++++.+..
T Consensus 310 ~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 310 WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred hcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 145578999985 23444444311 14889999999999999999876543
No 471
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.24 E-value=5.8e-12 Score=115.75 Aligned_cols=112 Identities=10% Similarity=0.194 Sum_probs=84.6
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCC-
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPE- 347 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~- 347 (485)
......+++.+.+.++.+|||||||+|.++..++++ +.+|+|+|+++.+++.++++.... .+++++++|+.++++++
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~~~~~~~~~ 93 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQFKFPKN 93 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGGCCCCSS
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhccC-CCeEEEEChHHhCCcccC
Confidence 356778888888888999999999999999999988 579999999999999999988643 48999999999988764
Q ss_pred CCccEEEEcccc-----------cccCCHHHHH----HHHHhcCCCCcEEE
Q 043471 348 NSFDVIYSRDTI-----------LHIQDKPALF----KSFFKWLKPGGTVL 383 (485)
Q Consensus 348 ~~fD~i~~~~~~-----------~~~~~~~~~l----~~~~~~LkpgG~l~ 383 (485)
..| .|+++... +|......++ +.+.|+++|+|.+.
T Consensus 94 ~~~-~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~ 143 (244)
T 1qam_A 94 QSY-KIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLA 143 (244)
T ss_dssp CCC-EEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHH
T ss_pred CCe-EEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchh
Confidence 455 45554322 2222222333 34677777777643
No 472
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.24 E-value=2.8e-11 Score=107.73 Aligned_cols=100 Identities=14% Similarity=0.147 Sum_probs=84.1
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCCCccEEEEcccccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPENSFDVIYSRDTILH 361 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 361 (485)
.++.+|||||||+|.++..+. .+..|+|+|+++.+++.+++++...+.+..+.++|....+++ ++||+|++.-++||
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHH
Confidence 456799999999999999887 367999999999999999999876667889999999988765 58999999999998
Q ss_pred cC--CHHHHHHHHHhcCCCCcEEEEE
Q 043471 362 IQ--DKPALFKSFFKWLKPGGTVLIS 385 (485)
Q Consensus 362 ~~--~~~~~l~~~~~~LkpgG~l~i~ 385 (485)
++ .+...+ ++.+.|+++|.++-.
T Consensus 181 LE~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred hhhhchhhHH-HHHHHhcCCCEEEEc
Confidence 84 233444 888899999776554
No 473
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=2.2e-11 Score=119.22 Aligned_cols=114 Identities=18% Similarity=0.283 Sum_probs=85.4
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCC-CCCCCcc
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKT-YPENSFD 351 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD 351 (485)
..++..+ .+++.+|||+|||+|.++..+++. ++.|+++|+|+.+++.|++++...+....+.++|+.+.. ...+.||
T Consensus 205 r~~l~~~-~~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD 282 (393)
T 4dmg_A 205 RRLFEAM-VRPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFH 282 (393)
T ss_dssp HHHHHTT-CCTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEE
T ss_pred HHHHHHH-hcCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCC
Confidence 3444443 456889999999999999999987 778999999999999999998633333456688876631 1134499
Q ss_pred EEEEcccccc---------cCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 352 VIYSRDTILH---------IQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 352 ~i~~~~~~~~---------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+|++...... ..+...+++.+.++|+|||++++.+..
T Consensus 283 ~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 283 HVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp EEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9999654321 134568899999999999999977543
No 474
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.23 E-value=1e-11 Score=116.69 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=81.4
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCC------------CCCeEEEEccCCCC-CCCCC
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGL------------KCSVEFEVADCTKK-TYPEN 348 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~------------~~~i~~~~~d~~~~-~~~~~ 348 (485)
.++.+|||||||+|.++..+++....+++++|+++.+++.|++++ .. ..+++++.+|+.+. +. ++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 456799999999999999999873359999999999999999987 33 35799999987552 22 57
Q ss_pred CccEEEEcccccccC--C--HHHHHHHHHhcCCCCcEEEEEe
Q 043471 349 SFDVIYSRDTILHIQ--D--KPALFKSFFKWLKPGGTVLISD 386 (485)
Q Consensus 349 ~fD~i~~~~~~~~~~--~--~~~~l~~~~~~LkpgG~l~i~~ 386 (485)
+||+|++.......+ . ..+++++++++|+|||.+++..
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 899999965432111 1 3778999999999999999874
No 475
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.23 E-value=1.4e-13 Score=126.84 Aligned_cols=114 Identities=17% Similarity=0.249 Sum_probs=91.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCC-C
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPE-N 348 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~-~ 348 (485)
.....+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ...+++++++|+.+.+++. +
T Consensus 16 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~~~~~ 93 (245)
T 1yub_A 16 KVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQFPNKQ 93 (245)
T ss_dssp TTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTTCCCSS
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcCcccCC
Confidence 45678888888888999999999999999999988 5899999999999999988765 2347999999999988764 6
Q ss_pred CccEEEEccc-----------ccccCCHHHHH----HHHHhcCCCCcEEEEEe
Q 043471 349 SFDVIYSRDT-----------ILHIQDKPALF----KSFFKWLKPGGTVLISD 386 (485)
Q Consensus 349 ~fD~i~~~~~-----------~~~~~~~~~~l----~~~~~~LkpgG~l~i~~ 386 (485)
+| .|+++.. +.|..+...++ +.+.|+|+|||.+.+..
T Consensus 94 ~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 94 RY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred Cc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 78 6666532 22333444555 77999999999987764
No 476
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.23 E-value=1.3e-11 Score=109.81 Aligned_cols=100 Identities=13% Similarity=0.081 Sum_probs=82.0
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC-CCCeEEEEeeccCCCCCCCCCCeeEEEhhhhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH-FENVKFMCADVTSPDLTFSEDSVDMMFSNWLLM 131 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~~~ 131 (485)
..+.+|||||||+|.++..++ .+..|+|+|+++.+++.+++.... ..+.++.++|....+ +.++||+|+++-++|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~---~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP---PAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC---CCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC---CCCCcchHHHHHHHH
Confidence 457799999999999999988 667999999999999999998532 257899999988633 346999999999999
Q ss_pred ccChHHHHHHHHHHHhhcccCcEEEE
Q 043471 132 YLSDKEVEKLAERMVKWLKVGGYIFF 157 (485)
Q Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~ 157 (485)
|+.+......+ ++...|+++|.++-
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEE
Confidence 99766544444 88889999976544
No 477
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.23 E-value=3e-11 Score=112.78 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=86.0
Q ss_pred cCCCCCCEEEEECCCC------ChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCCCCeEE-EEccCCCCCCCCCC
Q 043471 279 LDLKPGQKVLDVGCGI------GGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLKCSVEF-EVADCTKKTYPENS 349 (485)
Q Consensus 279 ~~~~~~~~vLDiGcG~------G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~-~~~d~~~~~~~~~~ 349 (485)
+.++++.+|||+|||+ |. ..+++.. +.+|+|+|+|+. + .++++ +++|+.+.+++ ++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----~~v~~~i~gD~~~~~~~-~~ 123 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----SDADSTLIGDCATVHTA-NK 123 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----CSSSEEEESCGGGCCCS-SC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----CCCEEEEECccccCCcc-Cc
Confidence 4678899999999955 55 4445544 369999999998 1 26888 99999987764 78
Q ss_pred ccEEEEcccccc-----------cCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHH
Q 043471 350 FDVIYSRDTILH-----------IQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQM 418 (485)
Q Consensus 350 fD~i~~~~~~~~-----------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (485)
||+|+++...+. ......+++++.++|||||++++..+.. ....++.++
T Consensus 124 fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~--------------------~~~~~l~~~ 183 (290)
T 2xyq_A 124 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH--------------------SWNADLYKL 183 (290)
T ss_dssp EEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS--------------------SCCHHHHHH
T ss_pred ccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc--------------------CCHHHHHHH
Confidence 999999643221 1123578999999999999999975322 112467788
Q ss_pred HHhCCCeEEEEe
Q 043471 419 LKDAGFVDIIAE 430 (485)
Q Consensus 419 l~~aGf~~~~~~ 430 (485)
+++.||..+.+.
T Consensus 184 l~~~GF~~v~~~ 195 (290)
T 2xyq_A 184 MGHFSWWTAFVT 195 (290)
T ss_dssp HTTEEEEEEEEE
T ss_pred HHHcCCcEEEEE
Confidence 888899876654
No 478
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.22 E-value=1.3e-11 Score=114.30 Aligned_cols=96 Identities=15% Similarity=0.044 Sum_probs=79.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCC------CCCeEEEEeeccCCCCCCCCCCeeEEE
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGH------FENVKFMCADVTSPDLTFSEDSVDMMF 125 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~D~v~ 125 (485)
...+.+|||||||+|..+..+++.+.+|+++|+++.+++.|+++... .++++++.+|+... . ++||+|+
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~--~---~~fD~Ii 144 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD--I---KKYDLIF 144 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC--C---CCEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH--H---hhCCEEE
Confidence 34568999999999999998887767899999999999999887542 35899999999873 2 7899999
Q ss_pred hhhhhhccChHHHHHHHHHHHhhcccCcEEEEEe
Q 043471 126 SNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRE 159 (485)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (485)
+.. +++ ..+++++.++|+|||.+++..
T Consensus 145 ~d~-----~dp--~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 145 CLQ-----EPD--IHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ESS-----CCC--HHHHHHHHTTEEEEEEEEEEE
T ss_pred ECC-----CCh--HHHHHHHHHhcCCCcEEEEEc
Confidence 862 332 258999999999999999863
No 479
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.22 E-value=1.2e-10 Score=116.16 Aligned_cols=134 Identities=20% Similarity=0.270 Sum_probs=99.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCC----CC
Q 043471 271 TTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKK----TY 345 (485)
Q Consensus 271 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~----~~ 345 (485)
....+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ .++++..+|+.+. ++
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~ 352 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPW 352 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGG
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhh
Confidence 4556666677778889999999999999999988 7799999999999999999886433 3799999999872 34
Q ss_pred CCCCccEEEEcccccccCCHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHHHHHHhCCCe
Q 043471 346 PENSFDVIYSRDTILHIQDKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYGQMLKDAGFV 425 (485)
Q Consensus 346 ~~~~fD~i~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 425 (485)
++++||+|++.....-. ..+++.+.+ ++|++.++++.... +...-...|.+.||+
T Consensus 353 ~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc~p~---------------------tlard~~~l~~~Gy~ 407 (433)
T 1uwv_A 353 AKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSCNPA---------------------TLARDSEALLKAGYT 407 (433)
T ss_dssp GTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEESCHH---------------------HHHHHHHHHHHTTCE
T ss_pred hcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEECChH---------------------HHHhhHHHHHHCCcE
Confidence 56789999996543322 245565554 78999988873210 111123566778998
Q ss_pred EEEEe
Q 043471 426 DIIAE 430 (485)
Q Consensus 426 ~~~~~ 430 (485)
+..+.
T Consensus 408 ~~~~~ 412 (433)
T 1uwv_A 408 IARLA 412 (433)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 480
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.22 E-value=8.9e-12 Score=122.48 Aligned_cols=115 Identities=18% Similarity=0.198 Sum_probs=86.4
Q ss_pred HHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC--CCCCeEEEEeeccCCCCCC--CCC
Q 043471 44 PEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG--HFENVKFMCADVTSPDLTF--SED 119 (485)
Q Consensus 44 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~--~~~~~~~~~~d~~~~~~~~--~~~ 119 (485)
..++..+ ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.. ...+++++++|+.+....+ ..+
T Consensus 202 ~~~~~~~---~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~ 278 (382)
T 1wxx_A 202 RLYMERF---RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGE 278 (382)
T ss_dssp HHHGGGC---CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTC
T ss_pred HHHHHhc---CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCC
Confidence 3344444 67899999999999999999987899999999999999998743 2346999999997631101 156
Q ss_pred CeeEEEhhhhhhccC-------hHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 120 SVDMMFSNWLLMYLS-------DKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 120 ~~D~v~~~~~~~~~~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+||+|++.-.....+ ......++.++.++|+|||+++++...
T Consensus 279 ~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 279 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 899999852111110 023668999999999999999997654
No 481
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.22 E-value=1.2e-11 Score=121.35 Aligned_cols=142 Identities=13% Similarity=0.092 Sum_probs=99.5
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCC--CC-CeEEEEccCCCC-C-C--
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGL--KC-SVEFEVADCTKK-T-Y-- 345 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~-~i~~~~~d~~~~-~-~-- 345 (485)
..++..+. .++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++... .. +++++++|+.+. + +
T Consensus 203 ~~~~~~~~-~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~ 281 (385)
T 2b78_A 203 RNELINGS-AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR 281 (385)
T ss_dssp HHHHHHTT-TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHh-cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH
Confidence 34444432 567899999999999999999862248999999999999999998643 33 799999998663 2 1
Q ss_pred CCCCccEEEEcccc-----cccC----CHHHHHHHHHhcCCCCcEEEEEecccCCCCCChhHHHHHHhcCCCCCCHHHHH
Q 043471 346 PENSFDVIYSRDTI-----LHIQ----DKPALFKSFFKWLKPGGTVLISDYCKSFGTPSVEFSEYIKQRGYDLHDVKSYG 416 (485)
Q Consensus 346 ~~~~fD~i~~~~~~-----~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (485)
...+||+|++.... .+.. +..++++.+.++|+|||.++++...... ....+ .+.+.
T Consensus 282 ~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~--~~~~~-------------~~~i~ 346 (385)
T 2b78_A 282 HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM--TVSQF-------------KKQIE 346 (385)
T ss_dssp TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS--CHHHH-------------HHHHH
T ss_pred hCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC--CHHHH-------------HHHHH
Confidence 24589999996443 2232 3455778889999999999998543211 11111 23456
Q ss_pred HHHHhCCCeEEEEe
Q 043471 417 QMLKDAGFVDIIAE 430 (485)
Q Consensus 417 ~~l~~aGf~~~~~~ 430 (485)
+.+.++|.+++...
T Consensus 347 ~~~~~~g~~~~~~~ 360 (385)
T 2b78_A 347 KGFGKQKHTYLDLQ 360 (385)
T ss_dssp HHHTTCCCEEEEEE
T ss_pred HHHHHcCCcEEEeC
Confidence 67778898855443
No 482
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.22 E-value=1.5e-11 Score=121.49 Aligned_cols=118 Identities=16% Similarity=0.142 Sum_probs=86.9
Q ss_pred hHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcCC--CC-CeEEEEeeccCCCCCC--
Q 043471 43 RPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNGH--FE-NVKFMCADVTSPDLTF-- 116 (485)
Q Consensus 43 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~~--~~-~~~~~~~d~~~~~~~~-- 116 (485)
.+.++..+. .++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.|+++... .. +++++++|+.+....+
T Consensus 207 ~~~~~~~~~-~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~ 285 (396)
T 2as0_A 207 NRLALEKWV-QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK 285 (396)
T ss_dssp HHHHHGGGC-CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh
Confidence 344444432 3678999999999999999999865 899999999999999987532 22 7999999987631001
Q ss_pred CCCCeeEEEhhhhhhccCh-------HHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 117 SEDSVDMMFSNWLLMYLSD-------KEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 117 ~~~~~D~v~~~~~~~~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
..++||+|++.-.....+. .....++.++.++|+|||.+++.+..
T Consensus 286 ~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 286 KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred hCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2568999998532111110 23678999999999999999887654
No 483
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.21 E-value=7.2e-10 Score=106.95 Aligned_cols=163 Identities=13% Similarity=0.200 Sum_probs=107.3
Q ss_pred HHHHHHHHHcCCCC-----CCEEEEECCCCChhHHHHhh--------c--------CCCEEEEEeCCHHHHHHHHHHhcC
Q 043471 270 ETTKEFVAKLDLKP-----GQKVLDVGCGIGGGDFYMAD--------K--------FDVHVVGIDLSINMISFALERAIG 328 (485)
Q Consensus 270 ~~~~~~~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~--------~--------~~~~v~g~D~s~~~~~~a~~~~~~ 328 (485)
+.+++.++.+...+ ..+|+|+|||+|..+..++. + ...+|...|+..+.....=+.+..
T Consensus 34 ~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~ 113 (374)
T 3b5i_A 34 HLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPP 113 (374)
T ss_dssp HHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCC
T ss_pred HHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhh
Confidence 34555666665543 47999999999998887622 1 135888889877766554444432
Q ss_pred CCC-------------CeEEEE---ccCCCCCCCCCCccEEEEcccccccC-----------------------------
Q 043471 329 LKC-------------SVEFEV---ADCTKKTYPENSFDVIYSRDTILHIQ----------------------------- 363 (485)
Q Consensus 329 ~~~-------------~i~~~~---~d~~~~~~~~~~fD~i~~~~~~~~~~----------------------------- 363 (485)
... +..|+. +.+..-.+|+++||+|+++.++||+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~ 193 (374)
T 3b5i_A 114 LVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTT 193 (374)
T ss_dssp BCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHH
T ss_pred hhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHH
Confidence 111 112333 33333467899999999999999986
Q ss_pred ---------CHHHHHHHHHhcCCCCcEEEEEecccCCCCCC----------hhHHHHHH----------------hcCCC
Q 043471 364 ---------DKPALFKSFFKWLKPGGTVLISDYCKSFGTPS----------VEFSEYIK----------------QRGYD 408 (485)
Q Consensus 364 ---------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~----------~~~~~~~~----------------~~~~~ 408 (485)
|...+|+..++.|+|||+++++........+. ..+...+. .....
T Consensus 194 ~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y 273 (374)
T 3b5i_A 194 TAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVY 273 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCcccc
Confidence 33346888899999999999997766543211 11111111 01234
Q ss_pred CCCHHHHHHHHH-hCCCeEEEEeec
Q 043471 409 LHDVKSYGQMLK-DAGFVDIIAEDR 432 (485)
Q Consensus 409 ~~~~~~~~~~l~-~aGf~~~~~~~~ 432 (485)
.++.+++.+.++ +.||++..++..
T Consensus 274 ~ps~~E~~~~l~~~~~F~I~~le~~ 298 (374)
T 3b5i_A 274 APSLQDFKEVVDANGSFAIDKLVVY 298 (374)
T ss_dssp CCCHHHHHHHHHHHCSEEEEEEEEE
T ss_pred CCCHHHHHHHHHhcCCcEEEEEEEE
Confidence 578999999998 599999877644
No 484
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.21 E-value=9.1e-12 Score=111.83 Aligned_cols=106 Identities=11% Similarity=0.074 Sum_probs=85.5
Q ss_pred HhccCCCCCCCcEEEEcCCCCcchHHHHhh--cCcEEEEeCChHHHHHHHHHcCCC-CCeEEEEeeccCCCCCCCCCCee
Q 043471 46 VLSLLPPYEGKTVLEFGAGIGRFTGELAKK--AGHVIALDFIDSVIKKNEEVNGHF-ENVKFMCADVTSPDLTFSEDSVD 122 (485)
Q Consensus 46 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~D 122 (485)
+++.+ ..+.+|||||||+|-++..++.. ..+|+|+|+++.|++.++++.... .+.++.+.|.... .+.++||
T Consensus 126 i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~---~p~~~~D 200 (281)
T 3lcv_B 126 LFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED---RLDEPAD 200 (281)
T ss_dssp HGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS---CCCSCCS
T ss_pred HHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc---CCCCCcc
Confidence 34444 33679999999999999988876 569999999999999999986432 3578888887653 2568999
Q ss_pred EEEhhhhhhccChHHHHHHHHHHHhhcccCcEEEE
Q 043471 123 MMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFF 157 (485)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 157 (485)
+|+++-+++|+.+......+ ++...|+|+|.++-
T Consensus 201 vaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 201 VTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp EEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred hHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 99999999999876555566 99999999997655
No 485
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.21 E-value=4.7e-11 Score=113.08 Aligned_cols=88 Identities=23% Similarity=0.313 Sum_probs=71.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCCCCC
Q 043471 270 ETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~~~~ 348 (485)
..+..+++.+.+.++.+|||||||+|.++..++++ +.+|+|+|+++.+++.+++++...+ .+++++.+|+.+.++ .
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF--P 105 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--C
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--c
Confidence 56778888888888999999999999999999988 6799999999999999999874222 479999999988765 4
Q ss_pred CccEEEEccccc
Q 043471 349 SFDVIYSRDTIL 360 (485)
Q Consensus 349 ~fD~i~~~~~~~ 360 (485)
+||+|+++...+
T Consensus 106 ~~D~Vv~n~py~ 117 (299)
T 2h1r_A 106 KFDVCTANIPYK 117 (299)
T ss_dssp CCSEEEEECCGG
T ss_pred cCCEEEEcCCcc
Confidence 799999976544
No 486
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.21 E-value=2.6e-11 Score=119.85 Aligned_cols=107 Identities=21% Similarity=0.107 Sum_probs=86.3
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCC---CeEEEEccCCCCCC----CCCCccEEE
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKC---SVEFEVADCTKKTY----PENSFDVIY 354 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~---~i~~~~~d~~~~~~----~~~~fD~i~ 354 (485)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...+. +++++.+|+.+... ...+||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46789999999999999999987335999999999999999999864433 79999999876421 146899999
Q ss_pred Ecccc---------cccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 355 SRDTI---------LHIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 355 ~~~~~---------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
+.... ....+...++.++.+.|+|||.+++++..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 97433 22256778899999999999999998643
No 487
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.21 E-value=2.9e-11 Score=121.40 Aligned_cols=114 Identities=17% Similarity=0.225 Sum_probs=87.4
Q ss_pred ccCCCC--CCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCC-CCC
Q 043471 48 SLLPPY--EGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTF-SED 119 (485)
Q Consensus 48 ~~~~~~--~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~-~~~ 119 (485)
..+... ++.+|||+|||+|..+..+++. +..|+|+|+|+.+++.++++... ..++.++++|+.. ++. .++
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~--~~~~~~~ 186 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRV--FGAAVPE 186 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTT--HHHHSTT
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHH--hhhhccc
Confidence 445555 8899999999999999999986 36899999999999999887532 3479999999887 332 357
Q ss_pred CeeEEEhh------hhhhccCh-------H-------HHHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 120 SVDMMFSN------WLLMYLSD-------K-------EVEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 120 ~~D~v~~~------~~~~~~~~-------~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
+||+|++. +++.+.++ . ...+++.++.++|||||+|++++.+..
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 89999962 23332221 1 134789999999999999999877654
No 488
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.21 E-value=4.6e-11 Score=110.68 Aligned_cols=102 Identities=19% Similarity=0.253 Sum_probs=83.9
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCCC
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFS 117 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~ 117 (485)
.+....+.+++.+...++ +|||||||+|.++..|++.+.+|+|+|+++.|++.++++... .+++++++|+.+.++ +
T Consensus 31 ~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~-~~v~vi~~D~l~~~~--~ 106 (271)
T 3fut_A 31 VSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG-LPVRLVFQDALLYPW--E 106 (271)
T ss_dssp CCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT-SSEEEEESCGGGSCG--G
T ss_pred CCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC-CCEEEEECChhhCCh--h
Confidence 466788899999988888 999999999999999999999999999999999999998763 689999999988543 3
Q ss_pred C-CCeeEEEhhhhhhccChHHHHHHHHH
Q 043471 118 E-DSVDMMFSNWLLMYLSDKEVEKLAER 144 (485)
Q Consensus 118 ~-~~~D~v~~~~~~~~~~~~~~~~~l~~ 144 (485)
+ ..+|.|+++. .++++.+...+++..
T Consensus 107 ~~~~~~~iv~Nl-Py~iss~il~~ll~~ 133 (271)
T 3fut_A 107 EVPQGSLLVANL-PYHIATPLVTRLLKT 133 (271)
T ss_dssp GSCTTEEEEEEE-CSSCCHHHHHHHHHH
T ss_pred hccCccEEEecC-cccccHHHHHHHhcC
Confidence 2 2688888874 567776544455544
No 489
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.20 E-value=3.3e-11 Score=110.84 Aligned_cols=97 Identities=16% Similarity=0.252 Sum_probs=79.7
Q ss_pred cChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcCCCCCeEEEEeeccCCCCCC-
Q 043471 38 LDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTF- 116 (485)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~- 116 (485)
.+......+++.+...++.+|||||||+|.++..|++++.+|+|+|+++.|++.++++....++++++++|+.+.+++-
T Consensus 13 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 13 HDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGS
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHh
Confidence 4567788899999888899999999999999999999999999999999999999998766579999999999865431
Q ss_pred -CCCCeeEEEhhhhhhccChH
Q 043471 117 -SEDSVDMMFSNWLLMYLSDK 136 (485)
Q Consensus 117 -~~~~~D~v~~~~~~~~~~~~ 136 (485)
..++|| |+++ ..++++.+
T Consensus 93 ~~~~~~~-vv~N-lPY~is~~ 111 (255)
T 3tqs_A 93 KTDKPLR-VVGN-LPYNISTP 111 (255)
T ss_dssp CCSSCEE-EEEE-CCHHHHHH
T ss_pred ccCCCeE-EEec-CCcccCHH
Confidence 135688 6655 34555543
No 490
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.19 E-value=3.2e-11 Score=119.18 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=83.3
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhc-CcEEEEeCChHHHHHHHHHcC--CC-C-CeEEEEeeccCCCCCC--CCCCeeEEE
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKA-GHVIALDFIDSVIKKNEEVNG--HF-E-NVKFMCADVTSPDLTF--SEDSVDMMF 125 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~~~~a~~~~~--~~-~-~~~~~~~d~~~~~~~~--~~~~~D~v~ 125 (485)
.++.+|||+|||+|.++..+++.| .+|+|+|+|+.+++.|+++.. .. . +++++++|+.+....+ ..++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 467899999999999999999986 489999999999999998643 22 3 7999999997631001 146899999
Q ss_pred hhhhh---------hccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 126 SNWLL---------MYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 126 ~~~~~---------~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+.-.. ..... ...++.++.+.|+|||+++++...
T Consensus 299 ~dpP~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRG--YKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTH--HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHH--HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 86321 11123 678999999999999999997654
No 491
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.18 E-value=1.1e-11 Score=123.27 Aligned_cols=123 Identities=17% Similarity=0.162 Sum_probs=90.4
Q ss_pred ChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCC
Q 043471 39 DKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPD 113 (485)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~ 113 (485)
+......+...+...++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++... .. +.++++|+..+.
T Consensus 86 Qd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~ 164 (464)
T 3m6w_A 86 QEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALA 164 (464)
T ss_dssp CCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHH
T ss_pred ECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhh
Confidence 3333344445567778999999999999999999976 25899999999999999887532 23 899999987732
Q ss_pred CCCCCCCeeEEEh----h--hhhhccChH--------------HHHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 114 LTFSEDSVDMMFS----N--WLLMYLSDK--------------EVEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 114 ~~~~~~~~D~v~~----~--~~~~~~~~~--------------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
...+++||+|++ + +++.+-++. ...++++++.++|||||+|+.++.+..
T Consensus 165 -~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 165 -EAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp -HHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred -hhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 123578999994 2 223222221 126799999999999999999876653
No 492
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.18 E-value=1.9e-11 Score=121.42 Aligned_cols=115 Identities=18% Similarity=0.147 Sum_probs=88.3
Q ss_pred HHHcCCCCCCEEEEECCCCChhHHHHhhcC--CCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCC-CCCCCcc
Q 043471 276 VAKLDLKPGQKVLDVGCGIGGGDFYMADKF--DVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKT-YPENSFD 351 (485)
Q Consensus 276 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~-~~~~~fD 351 (485)
...+...++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.+++++...+ .++.+.++|...++ ..+++||
T Consensus 98 ~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD 177 (456)
T 3m4x_A 98 GTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFD 177 (456)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEE
T ss_pred HHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCC
Confidence 344567889999999999999999999875 3599999999999999999886433 36888888887653 2357899
Q ss_pred EEEEccc------ccccCC----------------HHHHHHHHHhcCCCCcEEEEEecccC
Q 043471 352 VIYSRDT------ILHIQD----------------KPALFKSFFKWLKPGGTVLISDYCKS 390 (485)
Q Consensus 352 ~i~~~~~------~~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~~ 390 (485)
+|++... +..-++ ...+|+++.++|||||+++.++....
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 9998432 211111 22779999999999999999865443
No 493
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.17 E-value=9.1e-11 Score=109.98 Aligned_cols=90 Identities=17% Similarity=0.131 Sum_probs=79.4
Q ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCCCCeEEEEccCCCCCCCCC
Q 043471 269 IETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLKCSVEFEVADCTKKTYPEN 348 (485)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~i~~~~~d~~~~~~~~~ 348 (485)
...+..+++.+.+.++.+|||||||+|.++..++++ +.+|+|+|+++.+++.+++++.+ ..+++++++|+.+.++++.
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~-~~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKEL-YNNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHH-CSSEEEEESCTTTSCGGGS
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhcc-CCCeEEEECchhhCCcccC
Confidence 356788999999999999999999999999999998 67999999999999999998863 2489999999999888877
Q ss_pred CccEEEEccccc
Q 043471 349 SFDVIYSRDTIL 360 (485)
Q Consensus 349 ~fD~i~~~~~~~ 360 (485)
+||+|+++..++
T Consensus 114 ~fD~Iv~NlPy~ 125 (295)
T 3gru_A 114 DFNKVVANLPYQ 125 (295)
T ss_dssp CCSEEEEECCGG
T ss_pred CccEEEEeCccc
Confidence 899999886543
No 494
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.17 E-value=6.2e-11 Score=116.09 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=80.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhhc--CcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccCCCCCC-CCCCeeEEEh
Q 043471 52 PYEGKTVLEFGAGIGRFTGELAKKA--GHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTSPDLTF-SEDSVDMMFS 126 (485)
Q Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~~~~-~~~~~D~v~~ 126 (485)
..++.+|||+| |+|.++..+++.+ .+|+|+|+|+.|++.|+++... ..+++++++|+.+. ++. .+++||+|++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~-l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKP-LPDYALHKFDTFIT 247 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSC-CCTTTSSCBSEEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhh-chhhccCCccEEEE
Confidence 34678999999 9999999999886 4899999999999999987532 23799999999872 332 3568999999
Q ss_pred hhhhhccChHHHHHHHHHHHhhcccCcEE-EEE
Q 043471 127 NWLLMYLSDKEVEKLAERMVKWLKVGGYI-FFR 158 (485)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l-~~~ 158 (485)
+..++.. . ...+++++.++|+|||.+ +++
T Consensus 248 ~~p~~~~-~--~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 248 DPPETLE-A--IRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CCCSSHH-H--HHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCCCchH-H--HHHHHHHHHHHcccCCeEEEEE
Confidence 8544332 2 468999999999999944 554
No 495
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.17 E-value=1.3e-10 Score=111.88 Aligned_cols=99 Identities=11% Similarity=0.069 Sum_probs=83.2
Q ss_pred CCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCC--CCCeEEEEccCCCCCCCCCCccEEEEcccc
Q 043471 282 KPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGL--KCSVEFEVADCTKKTYPENSFDVIYSRDTI 359 (485)
Q Consensus 282 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~i~~~~~~ 359 (485)
.++.+|||+|||+|.++.. ++. +.+|+|+|+|+.+++.|++++... ..+++++++|+.+.. ++||+|++....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKN-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTT-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-ccC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 5788999999999999999 874 679999999999999999998643 347999999998865 789999996432
Q ss_pred cccCCHHHHHHHHHhcCCCCcEEEEEeccc
Q 043471 360 LHIQDKPALFKSFFKWLKPGGTVLISDYCK 389 (485)
Q Consensus 360 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 389 (485)
....+++.+.++|+|||.+++.+...
T Consensus 269 ----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 ----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp ----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 23478999999999999999986544
No 496
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.16 E-value=1.9e-11 Score=128.62 Aligned_cols=107 Identities=17% Similarity=0.215 Sum_probs=83.3
Q ss_pred CCCcEEEEcCCCCcchHHHHhhcC-cEEEEeCChHHHHHHHHHcC---CC-CCeEEEEeeccCCCCCCCCCCeeEEEhhh
Q 043471 54 EGKTVLEFGAGIGRFTGELAKKAG-HVIALDFIDSVIKKNEEVNG---HF-ENVKFMCADVTSPDLTFSEDSVDMMFSNW 128 (485)
Q Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~~~~a~~~~~---~~-~~~~~~~~d~~~~~~~~~~~~~D~v~~~~ 128 (485)
+|.+|||+|||+|.+++.+++.|+ +|+++|+|+.+++.|+++.. .. .+++++++|+.+. ++...++||+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~-l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW-LREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHH-HHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHH-HHhcCCCccEEEECC
Confidence 588999999999999999998877 59999999999999998642 22 3799999999763 223457899999853
Q ss_pred hhh--------ccC-hHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 129 LLM--------YLS-DKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 129 ~~~--------~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
... ... .....+++..+.++|+|||+++++...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 110 011 123778899999999999999987553
No 497
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.16 E-value=3e-11 Score=119.42 Aligned_cols=115 Identities=23% Similarity=0.208 Sum_probs=88.9
Q ss_pred HHHHHHcCCCCCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC--CCeEEEEccCCCCCC----C
Q 043471 273 KEFVAKLDLKPGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK--CSVEFEVADCTKKTY----P 346 (485)
Q Consensus 273 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~i~~~~~d~~~~~~----~ 346 (485)
..++..+ .+++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...+ .+++++++|+.+... +
T Consensus 208 ~~~~~~~-~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~ 286 (396)
T 2as0_A 208 RLALEKW-VQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK 286 (396)
T ss_dssp HHHHGGG-CCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHH-hhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh
Confidence 3444444 34788999999999999999998722499999999999999999986433 379999999876421 2
Q ss_pred CCCccEEEEccccc---------ccCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 347 ENSFDVIYSRDTIL---------HIQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 347 ~~~fD~i~~~~~~~---------~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
.++||+|++..... +..+...++.++.++|+|||.+++.+..
T Consensus 287 ~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 56899999964332 2245678899999999999999888643
No 498
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.15 E-value=2e-11 Score=119.97 Aligned_cols=105 Identities=22% Similarity=0.152 Sum_probs=84.8
Q ss_pred CCCEEEEECCCCChhHHHHhhcCCCEEEEEeCCHHHHHHHHHHhcCCC-CCeEEEEccCCCCCC----CCCCccEEEEcc
Q 043471 283 PGQKVLDVGCGIGGGDFYMADKFDVHVVGIDLSINMISFALERAIGLK-CSVEFEVADCTKKTY----PENSFDVIYSRD 357 (485)
Q Consensus 283 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-~~i~~~~~d~~~~~~----~~~~fD~i~~~~ 357 (485)
++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++...+ .+++++++|+.+... ..++||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 6789999999999999999988 6799999999999999999986433 248999999876421 156899999964
Q ss_pred cccc---------cCCHHHHHHHHHhcCCCCcEEEEEecc
Q 043471 358 TILH---------IQDKPALFKSFFKWLKPGGTVLISDYC 388 (485)
Q Consensus 358 ~~~~---------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 388 (485)
.... ..+...++.++.++|+|||.+++++..
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3321 134567899999999999999998643
No 499
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.15 E-value=2.5e-11 Score=120.56 Aligned_cols=126 Identities=14% Similarity=0.116 Sum_probs=91.7
Q ss_pred ccChhhhHHHhccCCCCCCCcEEEEcCCCCcchHHHHhh---cCcEEEEeCChHHHHHHHHHcCC--CCCeEEEEeeccC
Q 043471 37 DLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKK---AGHVIALDFIDSVIKKNEEVNGH--FENVKFMCADVTS 111 (485)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~ 111 (485)
..+......+...+...++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++... ..++.++++|+..
T Consensus 88 ~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~ 167 (456)
T 3m4x_A 88 YSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAE 167 (456)
T ss_dssp EECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHH
T ss_pred EEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHH
Confidence 334444444455567788999999999999999999986 35899999999999999886532 2479999999876
Q ss_pred CCCCCCCCCeeEEEhhh------hhhccChH--------------HHHHHHHHHHhhcccCcEEEEEeccCC
Q 043471 112 PDLTFSEDSVDMMFSNW------LLMYLSDK--------------EVEKLAERMVKWLKVGGYIFFRESCFH 163 (485)
Q Consensus 112 ~~~~~~~~~~D~v~~~~------~~~~~~~~--------------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (485)
+. ...+++||+|++.. ++.+-++. ...+++.++.++|||||+|+.++.+..
T Consensus 168 l~-~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 168 LV-PHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HH-HHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred hh-hhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 32 12357899999632 22221111 123789999999999999999877654
No 500
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.13 E-value=1.4e-10 Score=111.82 Aligned_cols=97 Identities=18% Similarity=0.204 Sum_probs=79.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhhcCcEEEEeCChHHHHHHHHHcC---CCCCeEEEEeeccCCCCCCCCCCeeEEEhhhh
Q 043471 53 YEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNG---HFENVKFMCADVTSPDLTFSEDSVDMMFSNWL 129 (485)
Q Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~~~~a~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~D~v~~~~~ 129 (485)
.++.+|||+|||+|.+++. ++.+.+|+|+|+|+.+++.|+++.. ..++++++++|+.+. . ++||+|++.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~--~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV--D---VKGNRVIMNLP 267 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC--C---CCEEEEEECCT
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh--c---CCCcEEEECCc
Confidence 4678999999999999999 8877799999999999999998743 224799999999873 2 78999998631
Q ss_pred hhccChHHHHHHHHHHHhhcccCcEEEEEecc
Q 043471 130 LMYLSDKEVEKLAERMVKWLKVGGYIFFRESC 161 (485)
Q Consensus 130 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (485)
+. ...++..+.++|+|||.+++.+..
T Consensus 268 --~~----~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 268 --KF----AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp --TT----GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred --Hh----HHHHHHHHHHHcCCCCEEEEEEee
Confidence 11 126889999999999999997664
Done!