BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043474
(160 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255567532|ref|XP_002524745.1| conserved hypothetical protein [Ricinus communis]
gi|223535929|gb|EEF37588.1| conserved hypothetical protein [Ricinus communis]
Length = 166
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 119/160 (74%), Gaps = 5/160 (3%)
Query: 1 MDHTLQNTHVKLLAFDLLSLTPTP-----DPATFSRSGKLLSRAEIVGTITSRDHKPSKF 55
MD QN HVKLLA DL+SLT TP DP +FS + K SRAEI+G +TS +HKP KF
Sbjct: 1 MDQKFQNIHVKLLALDLVSLTQTPPFSPSDPISFSHANKSFSRAEILGIVTSCEHKPHKF 60
Query: 56 IKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRI 115
+KFT+DDGTGCV C+LWLN LTS Y RR VRLIA AT FA+ IKIG+VARVRGRI
Sbjct: 61 LKFTIDDGTGCVSCILWLNQLTSPYFSRRSTPAVRLIASTATHFASLIKIGVVARVRGRI 120
Query: 116 ASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
SYRG VQIT SDVVIE+DPN E+ HWL C++LAR Y V
Sbjct: 121 TSYRGTVQITASDVVIERDPNAEIFHWLQCVKLARSCYHV 160
>gi|359479657|ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vitis vinifera]
gi|147810449|emb|CAN65336.1| hypothetical protein VITISV_023849 [Vitis vinifera]
Length = 165
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/161 (65%), Positives = 131/161 (81%), Gaps = 5/161 (3%)
Query: 1 MDHTLQNTHVKLLAFDLLSLTPTPDPATFS-----RSGKLLSRAEIVGTITSRDHKPSKF 55
M + L NTHVKLLAFDLLSLT TP P++ R G LSRAE +GT+TSR+ KP KF
Sbjct: 1 MSNQLYNTHVKLLAFDLLSLTQTPSPSSSDPISFSRRGTPLSRAETLGTVTSRELKPHKF 60
Query: 56 IKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRI 115
+KFTVDDGTGCVPCVLWLNHL+S Y RR+P+ VRLIA +A A+++K+G++ RVRGRI
Sbjct: 61 LKFTVDDGTGCVPCVLWLNHLSSPYFSRRNPADVRLIADLAEYQASEVKLGVLVRVRGRI 120
Query: 116 ASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVV 156
+YRG VQITVS+V++E+DPNME+LHWLDC++LARK YDV+
Sbjct: 121 TAYRGTVQITVSNVIVERDPNMEILHWLDCIKLARKCYDVM 161
>gi|224085511|ref|XP_002307601.1| predicted protein [Populus trichocarpa]
gi|222857050|gb|EEE94597.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/162 (67%), Positives = 129/162 (79%), Gaps = 5/162 (3%)
Query: 1 MDHTLQNTHVKLLAFDLLSLTPTP-----DPATFSRSGKLLSRAEIVGTITSRDHKPSKF 55
MD LQNTHVKLLAFDLLSL TP DP TF+R +SR EI+G ITSR+ KP+KF
Sbjct: 1 MDQRLQNTHVKLLAFDLLSLAQTPSFSTYDPITFTRKNTTISRTEILGVITSRELKPNKF 60
Query: 56 IKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRI 115
+KFT+DDGTGCV CVLWLN LTS Y RR+P+ V+LIA +A FA++IKIGLVARVRGRI
Sbjct: 61 LKFTIDDGTGCVTCVLWLNQLTSPYFSRRNPANVKLIADMAAHFASEIKIGLVARVRGRI 120
Query: 116 ASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVVV 157
A YRG VQ+TVSDVV+E+DPN+E HWLDC+RLAR Y+VV
Sbjct: 121 AGYRGAVQVTVSDVVVERDPNVEAFHWLDCIRLARNCYNVVA 162
>gi|357483465|ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatula]
gi|355513354|gb|AES94977.1| CST complex subunit STN1 [Medicago truncatula]
Length = 185
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 120/155 (77%), Gaps = 2/155 (1%)
Query: 4 TLQNTHVKLLAFDLLSLTPTPDPA-TFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDD 62
+L NTHVKLLAFDLL+LTP P +F+R+ ++RAE VGTIT RDHKP KF++F +DD
Sbjct: 11 SLHNTHVKLLAFDLLTLTPPISPNHSFTRNSIPITRAETVGTITLRDHKPFKFLRFAIDD 70
Query: 63 GTGCVPCVLWLNHLTSLYLPRR-DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGD 121
GTGC+PC+LWLNH+TS +L RR P + L+A A A +K+G VARVRGR+ Y+G
Sbjct: 71 GTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVVKVGNVARVRGRVTEYKGG 130
Query: 122 VQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVV 156
VQITV+DV+ E+DPN+EVLHW++C+ LAR Y++V
Sbjct: 131 VQITVTDVISERDPNVEVLHWVECVNLARNCYNLV 165
>gi|388505562|gb|AFK40847.1| unknown [Medicago truncatula]
Length = 179
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 117/154 (75%), Gaps = 2/154 (1%)
Query: 4 TLQNTHVKLLAFDLLSLTPTPDPA-TFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDD 62
+L NTHVKLLAFDLL+LTP P +F+R+ ++RAE VGTIT RDHKP KF++F +DD
Sbjct: 11 SLHNTHVKLLAFDLLTLTPPISPNHSFTRNSISITRAETVGTITLRDHKPFKFLRFAIDD 70
Query: 63 GTGCVPCVLWLNHLTSLYLP-RRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGD 121
GTGC+PC+LWLNH+TS +L RR P + L+A A A K G VARVRGR+ Y+G
Sbjct: 71 GTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVAKFGNVARVRGRVTEYKGG 130
Query: 122 VQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
VQITV+DVV E+DPN+EVLHW++C+ LAR Y++
Sbjct: 131 VQITVTDVVSERDPNVEVLHWVECVNLARNCYNL 164
>gi|400180216|gb|AFP73237.1| CST complex subunit STN1-like protein [Carica papaya]
Length = 154
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 112/147 (76%), Gaps = 5/147 (3%)
Query: 9 HVKLLAFDLLSLTPT-PDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCV 67
H+KLLAFD SLT T +F+R G +SR E +GT+ SRD KPS+F+KF +DDGTGC+
Sbjct: 9 HMKLLAFDFTSLTQTRSHSKSFTRKGIPISRVESLGTVVSRDLKPSRFLKFKLDDGTGCI 68
Query: 68 PCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVS 127
C+LWLN L+S ++PSTVRLIA VA A +IK+G VARVRGR+ YRG +QITVS
Sbjct: 69 ACILWLNQLSS----NQNPSTVRLIAQVANHLAEEIKMGRVARVRGRVTGYRGRIQITVS 124
Query: 128 DVVIEKDPNMEVLHWLDCLRLARKRYD 154
D+VIE+DPN ++LHWL+C+RLARK D
Sbjct: 125 DIVIERDPNAQILHWLECIRLARKVLD 151
>gi|449455286|ref|XP_004145384.1| PREDICTED: CST complex subunit STN1-like [Cucumis sativus]
gi|449474220|ref|XP_004154109.1| PREDICTED: CST complex subunit STN1-like [Cucumis sativus]
gi|449526303|ref|XP_004170153.1| PREDICTED: CST complex subunit STN1-like [Cucumis sativus]
Length = 168
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 113/154 (73%), Gaps = 2/154 (1%)
Query: 4 TLQNTHVKLLAFDLLSLTPTPDPATFS--RSGKLLSRAEIVGTITSRDHKPSKFIKFTVD 61
+L THVKLLAFDL SL T + S R G +S EIVG + RD KP++F+KF+VD
Sbjct: 10 SLYQTHVKLLAFDLNSLNQTSSSDSVSFSRKGYAVSCTEIVGVVVFRDLKPNRFLKFSVD 69
Query: 62 DGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGD 121
DGT CV C+LWLNHLTS Y R VR++ +AT FAA+I++G+V RVRG+++SYRG
Sbjct: 70 DGTACVGCILWLNHLTSSYFASRHHQDVRILGDMATHFAAQIRVGIVVRVRGKLSSYRGM 129
Query: 122 VQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
VQITVSDVV+E DPN E+LHWLD +RLA K YD+
Sbjct: 130 VQITVSDVVVEDDPNAEILHWLDSMRLAMKCYDL 163
>gi|18390729|ref|NP_563781.1| CST complex subunit STN1 [Arabidopsis thaliana]
gi|75335200|sp|Q9LMK5.1|STN1_ARATH RecName: Full=CST complex subunit STN1; AltName: Full=Suppressor of
cdc thirteen homolog; Short=AtSTN1
gi|8954034|gb|AAF82208.1|AC067971_16 F10K1.17 [Arabidopsis thaliana]
gi|21554324|gb|AAM63429.1| unknown [Arabidopsis thaliana]
gi|26452561|dbj|BAC43365.1| unknown protein [Arabidopsis thaliana]
gi|28827422|gb|AAO50555.1| unknown protein [Arabidopsis thaliana]
gi|332189958|gb|AEE28079.1| CST complex subunit STN1 [Arabidopsis thaliana]
Length = 160
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 114/160 (71%), Gaps = 3/160 (1%)
Query: 1 MDHTLQNTHVKLLAFDLLSLTPTP-DPATFSR-SGKLLSRAEIVGTITSRDHKPSKFIKF 58
MD +LQ+TH KL+A D+ LT +P + +FS G +SR EIVGTI SRD P KF+KF
Sbjct: 1 MDRSLQSTHAKLVARDIQRLTQSPTESNSFSLLGGACVSRVEIVGTIVSRDLTP-KFLKF 59
Query: 59 TVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASY 118
VDDGTGCV CV+WLN LTS Y R DP+T+ L+A A AA+I+IG VARVRGR+ SY
Sbjct: 60 GVDDGTGCVTCVMWLNQLTSSYFSRWDPATILLLASAARKQAAQIRIGAVARVRGRVGSY 119
Query: 119 RGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVVVN 158
RG +QIT + V E+DPN E+LHWL+CL+L + Y V +
Sbjct: 120 RGVMQITANVAVAERDPNAEILHWLECLKLGQSCYRVRIQ 159
>gi|297843504|ref|XP_002889633.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297335475|gb|EFH65892.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 158
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
Query: 1 MDHTLQNTHVKLLAFDLLSLTPTP-DPATFSR-SGKLLSRAEIVGTITSRDHKPSKFIKF 58
MD +LQNTH KL+A D+ LT +P + +FS G +SR E VGTI SRD P KF+KF
Sbjct: 1 MDRSLQNTHAKLVARDIQRLTQSPTESNSFSLLGGACVSRVETVGTIISRDLTP-KFLKF 59
Query: 59 TVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASY 118
VDDGTGCV CVLWLN LTS Y R P T+ L+A A AA+I+IG VARVRGR+ SY
Sbjct: 60 GVDDGTGCVTCVLWLNQLTSSYFSRWHPDTILLLASAARKQAAEIRIGSVARVRGRVGSY 119
Query: 119 RGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVV 156
RG +QIT + VV+E+DPN E+LHWL+CLRL + Y ++
Sbjct: 120 RGVMQITATVVVVERDPNAEILHWLECLRLGQSCYRIL 157
>gi|242035657|ref|XP_002465223.1| hypothetical protein SORBIDRAFT_01g034490 [Sorghum bicolor]
gi|241919077|gb|EER92221.1| hypothetical protein SORBIDRAFT_01g034490 [Sorghum bicolor]
Length = 164
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 111/161 (68%), Gaps = 12/161 (7%)
Query: 1 MDHTLQNTHVKLLAFDLLSLT-PTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFT 59
MDH L HVK+LA DLLSLT P F R G+ ++RAE+VG + SRD + KF++F
Sbjct: 1 MDHLLHLVHVKILAADLLSLTIQHTSPPAFLRCGRTVARAELVGIVVSRDRR-EKFLRFV 59
Query: 60 VDDGTGCVPCVLWLNHL-----TSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGR 114
+DDGTGCVPC+LWLNH TS L DP+ A +A + ++++G + RVRG+
Sbjct: 60 IDDGTGCVPCILWLNHQYLNASTSSGLSESDPT-----AEIALKMSEEVRLGTLLRVRGK 114
Query: 115 IASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
I +YRG +QITV DVV+EKDPN EVLHWL C+RLA++ YD+
Sbjct: 115 ITTYRGAIQITVRDVVVEKDPNSEVLHWLQCVRLAKECYDL 155
>gi|356528736|ref|XP_003532955.1| PREDICTED: CST complex subunit STN1-like [Glycine max]
Length = 183
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 11/157 (7%)
Query: 5 LQNTHVKLLAFDLLSLTPTPDPAT-----FSRSGKLLSRAEIVGTITSRDHKPSKFIKFT 59
L NTHVKLLAFDLLSLT +P P++ F R G +SR E VGTIT RD K +F++F
Sbjct: 14 LHNTHVKLLAFDLLSLTQSPFPSSDATTSFFRRGIPISRVETVGTITLRDLKHDRFLRFA 73
Query: 60 VDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYR 119
VDDGT CVPCVLWLN S + RR + A FAA +K+G VARVRGR++ +R
Sbjct: 74 VDDGTACVPCVLWLNDANSPSVARRRRHEL------AARFAALVKLGAVARVRGRLSRFR 127
Query: 120 GDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVV 156
G +Q+TVSDV IE+DPN E+ H LDC+ LAR Y+++
Sbjct: 128 GTLQVTVSDVAIERDPNAEIFHRLDCILLARNCYNIL 164
>gi|223946827|gb|ACN27497.1| unknown [Zea mays]
gi|413955646|gb|AFW88295.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 165
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 19/165 (11%)
Query: 1 MDHTLQNTHVKLLAFDLLSLT-PTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFT 59
MD L HVK+LA DLLSLT P TF R G+ ++RAE+VG + SRD + KF++F
Sbjct: 1 MDQPLHLVHVKILAADLLSLTVRHTSPTTFLRCGRRVARAELVGVVVSRDRR-EKFLRFL 59
Query: 60 VDDGTGCVPCVLWLNHLTSLYLPRR---------DPSTVRLIAGVATDFAAKIKIGLVAR 110
VDDGTGCVPC+LWLNH YL R DP+ A +A + ++++G + R
Sbjct: 60 VDDGTGCVPCILWLNHQ---YLNARTSSGPSSDHDPT-----AEMALKMSEEVRLGTLLR 111
Query: 111 VRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
VRG+IASYRG +QITV DVV EKDPN EVLHWL C+RLA++ YD+
Sbjct: 112 VRGKIASYRGAIQITVRDVVPEKDPNSEVLHWLQCVRLAKECYDL 156
>gi|294463299|gb|ADE77185.1| unknown [Picea sitchensis]
Length = 185
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 106/151 (70%), Gaps = 4/151 (2%)
Query: 8 THVKLLAFDLLSLT-PTPDPAT--FSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
+HVKLL+FDLLSL P + F R G+ + + E+VG + SR+ K KF+KF +DDG+
Sbjct: 18 SHVKLLSFDLLSLQKPNTRGGSEPFWRKGRPVRKVEMVGVVVSRERK-DKFLKFELDDGS 76
Query: 65 GCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQI 124
GCVPC+LWLNH+T+ Y P+ D + +A +A A ++++G + RV+GRI Y +QI
Sbjct: 77 GCVPCILWLNHMTNRYYPKTDQLQMESMAAMALKQAEQVQLGRLVRVQGRITLYNKQLQI 136
Query: 125 TVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
TVS V+EKDPN E+LHW++C+RLA + YD+
Sbjct: 137 TVSSAVVEKDPNAEILHWMECIRLAVRCYDM 167
>gi|226495337|ref|NP_001151468.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|195646980|gb|ACG42958.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 164
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 20/165 (12%)
Query: 1 MDHTLQNTHVKLLAFDLLSLT-PTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFT 59
MD L HVK+LA DLLSLT P TF R G+ ++RAE+VG + SRD + KF++F
Sbjct: 1 MDQPLHLVHVKILAADLLSLTVRHTSPTTFLRCGRRVARAELVGVVVSRDRR-EKFLRFL 59
Query: 60 VDDGTGCVPCVLWLNHLTSLYLPRR---------DPSTVRLIAGVATDFAAKIKIGLVAR 110
VDDGTGCVPC+LWLNH YL R DP+ A +A + ++++G + R
Sbjct: 60 VDDGTGCVPCILWLNH---QYLNARTSSGPSSDHDPT-----AEMALKMSEEVRLGTLLR 111
Query: 111 VRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
VRG+IASYRG +QITV DVV DPN +VLHWL C+RLA++ YD+
Sbjct: 112 VRGKIASYRGAIQITVRDVV-PNDPNSDVLHWLQCVRLAKECYDL 155
>gi|357112231|ref|XP_003557913.1| PREDICTED: CST complex subunit STN1-like [Brachypodium distachyon]
Length = 159
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 104/157 (66%), Gaps = 12/157 (7%)
Query: 4 TLQNTHVKLLAFDLLSLT-PTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDD 62
+L HVKLLA DLLSLT P +F+ G++++RAE+VG + SRD + KF++F +DD
Sbjct: 3 SLHLVHVKLLAADLLSLTLRHTSPPSFAHRGRIVARAEVVGVVVSRDRR-EKFLRFLIDD 61
Query: 63 GTGCVPCVLWLNHL-----TSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIAS 117
GTGCVPCVLWLNH +S DP+ +A + + +G + RVRGRI
Sbjct: 62 GTGCVPCVLWLNHQYLNANSSSGTLDTDPT-----GEMALQMSEVVHLGTLLRVRGRIVM 116
Query: 118 YRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYD 154
YRG +QI V DV++EKDPN+E+LHWL C+ +A++ +D
Sbjct: 117 YRGAMQIAVRDVILEKDPNVELLHWLQCVHMAKECFD 153
>gi|115453161|ref|NP_001050181.1| Os03g0366900 [Oryza sativa Japonica Group]
gi|108708339|gb|ABF96134.1| OB-fold nucleic acid binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113548652|dbj|BAF12095.1| Os03g0366900 [Oryza sativa Japonica Group]
gi|215701028|dbj|BAG92452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624978|gb|EEE59110.1| hypothetical protein OsJ_10972 [Oryza sativa Japonica Group]
Length = 160
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 26 PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNH-LTSLYLPRR 84
P +F+R G+ ++RAEIVG + SRD + KF++F VDDGTGCVPCVLWLNH +
Sbjct: 26 PPSFARCGRTVTRAEIVGVVVSRDRR-EKFLRFLVDDGTGCVPCVLWLNHHYLNAASSSS 84
Query: 85 DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
S A +A + + +G + RVRGRI YRG +QI V DVV+EKDPN+EV+HWL
Sbjct: 85 RASDSDPTAEMALRMSEVVSLGTLLRVRGRIVLYRGAIQIAVRDVVLEKDPNVEVMHWLQ 144
Query: 145 CLRLARKRYDV 155
C+R+A++ YD+
Sbjct: 145 CIRMAKECYDL 155
>gi|218192901|gb|EEC75328.1| hypothetical protein OsI_11709 [Oryza sativa Indica Group]
Length = 327
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 2/132 (1%)
Query: 25 DPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNH-LTSLYLPR 83
P +F+R G+ ++RAEIVG + SRD + KF++F VDDGTGCVPCVLWLNH S
Sbjct: 192 SPPSFARCGRTVTRAEIVGVVVSRDRR-EKFLRFLVDDGTGCVPCVLWLNHHYLSAASSS 250
Query: 84 RDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWL 143
S A +A + + +G + RVRGRI Y G +QI V DVV+EKDPN+EV+HWL
Sbjct: 251 FRASDSDPTAEMALRMSEVVSLGTLLRVRGRIVLYHGAIQIAVRDVVLEKDPNVEVMHWL 310
Query: 144 DCLRLARKRYDV 155
C+ +A++ YD+
Sbjct: 311 QCICMAKECYDL 322
>gi|168016881|ref|XP_001760977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687986|gb|EDQ74366.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 83/128 (64%), Gaps = 10/128 (7%)
Query: 33 GKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPST---- 88
G+ + + E++G + + D K ++++FT+DDGTGCVPC+ W N+ + P P+
Sbjct: 1 GRSVRQVEVMGIVVTVDRK-ERYLRFTLDDGTGCVPCIFWTNYAS---FPATSPAKGLEL 56
Query: 89 -VRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
R +AT A ++K+G + RV+GR+ +Y +Q+TV+ + EKDPN EVLHW++C+R
Sbjct: 57 RSRQEMAIATT-AKQVKLGDLLRVQGRLNTYTNQIQVTVASLRTEKDPNAEVLHWVECMR 115
Query: 148 LARKRYDV 155
LA+ YD+
Sbjct: 116 LAKCCYDL 123
>gi|357483455|ref|XP_003612014.1| CST complex subunit STN1 [Medicago truncatula]
gi|355513349|gb|AES94972.1| CST complex subunit STN1 [Medicago truncatula]
Length = 363
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 18/147 (12%)
Query: 12 LLAFDLLSLTPTPDPA-TFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCV 70
LL +L LTP P +F R+ ++R E + TIT DHKP KF+ F +D GT C+P +
Sbjct: 88 LLVPHVLHLTPPLSPNHSFIRNILPITRTETLATITLCDHKPFKFLGFAIDGGTCCIPFI 147
Query: 71 LWLNHLTSLYLPR-RDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDV 129
LWLNH+TS L R R P + L+ A A +K VQIT+++V
Sbjct: 148 LWLNHMTSPQLARWRSPQDLCLLVDAAARLAEVVK----------------GVQITITNV 191
Query: 130 VIEKDPNMEVLHWLDCLRLARKRYDVV 156
V E+D N+EVLH ++C+ LAR Y+++
Sbjct: 192 VGERDLNVEVLHLVECVNLARNCYNLL 218
>gi|145345363|ref|XP_001417183.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577410|gb|ABO95476.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 137
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 26 PATFSRSGKLLSRAEIVG-TITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRR 84
A+ +++ + R E+ G + R K SK I FTVDDG+GCV CV+W ++ +
Sbjct: 14 KASETKASFVARRVEVCGFVVEKRRRKDSKVI-FTVDDGSGCVECVVWTQDGDAVSGEQM 72
Query: 85 DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
+ + A A A I++G +ARV+GRI + G QI + V ++ DPN E+L WLD
Sbjct: 73 ELFGIASTADGAAAVARDIRVGSLARVQGRIRDWNGRRQINATAVQVDLDPNEELLFWLD 132
>gi|308802708|ref|XP_003078667.1| unnamed protein product [Ostreococcus tauri]
gi|116057120|emb|CAL51547.1| unnamed protein product [Ostreococcus tauri]
Length = 189
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%)
Query: 35 LLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAG 94
+ R E+ G + R + + FT+DDGTGCV CV+W+ + R D + A
Sbjct: 75 IARRVEVCGYVVERRTRKDSKVIFTLDDGTGCVECVVWMQDGDAATGERSDLFGIASAAD 134
Query: 95 VATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
A A +I++G +ARV+G + +RG QI V I+ DPN E L WLD
Sbjct: 135 GAAALAKEIRVGSLARVQGVVRHWRGHRQINTKSVQIDLDPNQECLFWLD 184
>gi|255081384|ref|XP_002507914.1| predicted protein [Micromonas sp. RCC299]
gi|226523190|gb|ACO69172.1| predicted protein [Micromonas sp. RCC299]
Length = 183
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 16 DLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNH 75
D+ P + A G+ + R E++G + S + KP K + FT+DDGTGCV CV+W+
Sbjct: 32 DVWVPAPEGNGAVHLYRGRPVRRCEMMGCVVSLNPKPGKTV-FTLDDGTGCVECVVWMGM 90
Query: 76 LTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDP 135
+ D +++G + R++GR+ YR Q+ V+ + KDP
Sbjct: 91 DETGTAGGGGTDGTVGADAFGVD-PDGLRVGALVRIQGRMTMYRAKWQLAVNALQCCKDP 149
Query: 136 NMEVLHWLDCLRLAR 150
N E+L W+D +R
Sbjct: 150 NEEILFWVDWVRAGE 164
>gi|302808730|ref|XP_002986059.1| hypothetical protein SELMODRAFT_269089 [Selaginella moellendorffii]
gi|300146207|gb|EFJ12878.1| hypothetical protein SELMODRAFT_269089 [Selaginella moellendorffii]
Length = 108
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 26/134 (19%)
Query: 5 LQNTHVKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
+++ H +LLAFD F R ++ R E+VG S + KP K+++F VDDGT
Sbjct: 1 MESHHARLLAFD------------FVRK-QVGRRVEMVGVAVSVERKP-KYVRFAVDDGT 46
Query: 65 GCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQI 124
GC+ C+LW N + P++ A D A + +G + V GR++ Y Q+
Sbjct: 47 GCISCILWTNQSGA---PQQQ---------AAADMARLVTLGGLLAVHGRVSRYHHHPQL 94
Query: 125 TVSDVVIEKDPNME 138
TVS ++ + D N E
Sbjct: 95 TVSSLLPQPDANAE 108
>gi|440794453|gb|ELR15614.1| OBfold nucleic acid binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 201
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 21/149 (14%)
Query: 8 THVKLLAFDLLSLTPTPDP---ATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
THVKL D L+ P +P F+ +G ++R ++G I +P + + +VDDGT
Sbjct: 58 THVKLFIGDALTNLPLSEPDATEPFNLNGHPVTRVAVMGIIVEALPRP-RHLALSVDDGT 116
Query: 65 GCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQI 124
G + C + N + +P D +++G +A ++G++ +R I
Sbjct: 117 GRIQCAYYANSVDEGGVPYSD-----------------LQVGCLASIQGKLHHFRQQRSI 159
Query: 125 TVSDVVIEKDPNMEVLHWLDCLRLARKRY 153
+ + IE+DPN E H LD +RL Y
Sbjct: 160 AIYRIGIEEDPNAETQHMLDVVRLGETIY 188
>gi|334314095|ref|XP_001368948.2| PREDICTED: CST complex subunit STN1-like [Monodelphis domestica]
Length = 368
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L++ + P F +G + + +I+GT+ K S F + VDD TG + C
Sbjct: 28 KLYVKDILNIKESQQAPGVFFYNGHPIKQVDILGTVVGVKEKES-FYSYGVDDSTGVINC 86
Query: 70 VLWLNHLTSLYLPRRDPSTVRLIAGV---------ATDFAAKIKIGLVARVRGRIASYRG 120
+ W N + P + S+V + T+ K++IG + R+RG I YR
Sbjct: 87 ICWKNSQDTKPFPAKFSSSVSGGQSLTSLLRKLQETTEKKTKLEIGDIIRMRGYIRVYRE 146
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 147 QREIHATTYYKVDDPVWNVQIARMLELPDIYRKVYD 182
>gi|299472265|emb|CBN77235.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 400
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 55 FIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGR 114
++K+ +DDGTG +PC + H + + + ++G + V+G+
Sbjct: 109 YVKYILDDGTGLLPCTQYERHAGT--------------GATHRGHSERHELGELLVVQGK 154
Query: 115 IASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRY 153
+ YRG ++ ++ DPN E LHWL C+ L + Y
Sbjct: 155 LKRYRGAREVAITSASKPTDPNQEALHWLRCVELGKTVY 193
>gi|325185021|emb|CCA19512.1| expressed protein putative [Albugo laibachii Nc14]
Length = 349
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 34 KLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIA 93
+L+++A+I G + S HK + ++F VDDGT +P VLWL ++ +
Sbjct: 35 RLITKAQICGIVISIQHKAER-VEFLVDDGTALIPAVLWLPEAGQ-------ERSLAINL 86
Query: 94 GVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRY 153
G +F K++ R +++ V I +DPN E+ HWL+ +RL R+ Y
Sbjct: 87 GDLVNFEGKLQ----REARRDDLEEPNQIELRVLRYSIVQDPNEEMEHWLNTMRLCREVY 142
>gi|410976043|ref|XP_003994435.1| PREDICTED: LOW QUALITY PROTEIN: CST complex subunit STN1 [Felis
catus]
Length = 379
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 22/160 (13%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F +G + + EI+GT+ R K + F + VDD TG + C
Sbjct: 28 KLYIRDILDLKESCQVPGVFFYNGHPIKQVEILGTVIGRREKDT-FYSYGVDDSTGVINC 86
Query: 70 VLW-------------LNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIA 116
+ W + H L L + I KI+IG + ++RG I
Sbjct: 87 ICWKKSNNTESSSGTFMXHTGELNLTSQLKKLQETIEQ-----RTKIEIGDIIQIRGYIH 141
Query: 117 SYRGDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+YR + +I V+ DP N+++ L+ + RK YD
Sbjct: 142 TYREEREIRVTTYYKVDDPVCNIQIARMLELPSIYRKVYD 181
>gi|292630944|sp|D2GXY4.2|STN1_AILME RecName: Full=CST complex subunit STN1; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
Length = 367
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + P F +G + + EI+GT+ R K + F + VDDGTG +
Sbjct: 26 AKLYIGDILDLKESRQVPGVFFYNGHPIKQVEILGTVIGRREKDA-FYSYGVDDGTGVIN 84
Query: 69 CVLWLNHLTSLYLPRRDPSTVRLIAGV------ATDFAAKIKIGLVARVRGRIASYRGDV 122
C+ W + V + + KI+IG + ++RG + +YR +
Sbjct: 85 CICWKKSNNAAPSSAAPALGVLNLTSQLKKLQETIEQKTKIEIGDIVQIRGYVHTYREER 144
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I V+ DP N+++ L+ + RK YD
Sbjct: 145 EIRVTTYYKVDDPVCNIQIARMLELPSIYRKVYD 178
>gi|281352088|gb|EFB27672.1| hypothetical protein PANDA_001803 [Ailuropoda melanoleuca]
Length = 373
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + P F +G + + EI+GT+ R K + F + VDDGTG +
Sbjct: 26 AKLYIGDILDLKESRQVPGVFFYNGHPIKQVEILGTVIGRREKDA-FYSYGVDDGTGVIN 84
Query: 69 CVLWLNHLTSLYLPRRDPSTVRLIAGV------ATDFAAKIKIGLVARVRGRIASYRGDV 122
C+ W + V + + KI+IG + ++RG + +YR +
Sbjct: 85 CICWKKSNNAAPSSAAPALGVLNLTSQLKKLQETIEQKTKIEIGDIVQIRGYVHTYREER 144
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I V+ DP N+++ L+ + RK YD
Sbjct: 145 EIRVTTYYKVDDPVCNIQIARMLELPSIYRKVYD 178
>gi|301756232|ref|XP_002913948.1| PREDICTED: CST complex subunit STN1-like [Ailuropoda melanoleuca]
Length = 403
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + P F +G + + EI+GT+ R K + F + VDDGTG +
Sbjct: 53 AKLYIGDILDLKESRQVPGVFFYNGHPIKQVEILGTVIGRREKDA-FYSYGVDDGTGVIN 111
Query: 69 CVLWLNHLTSLYLPRRDPSTVRLIAGVATDF---------AAKIKIGLVARVRGRIASYR 119
C+ W + + + + + KI+IG + ++RG + +YR
Sbjct: 112 CICWKKSNNAAPSSATTAAPALGVLNLTSQLKKLQETIEQKTKIEIGDIVQIRGYVHTYR 171
Query: 120 GDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I V+ DP N+++ L+ + RK YD
Sbjct: 172 EEREIRVTTYYKVDDPVCNIQIARMLELPSIYRKVYD 208
>gi|426253053|ref|XP_004020216.1| PREDICTED: CST complex subunit STN1 [Ovis aries]
Length = 368
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + P F +G + + +I+GT+ K + F + VDD TG +
Sbjct: 27 AKLYIRDILDLKESGQVPGVFFYNGHPIKQVDILGTVIGVREKDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHL--TSLYLPRRDPSTVRLIAGVATDFA--AKIKIGLVARVRGRIASYRGDV 122
C+ W LN+ +S R+ S + + A AK++IG + RVRG I +RG+
Sbjct: 86 CICWKSLNNTKSSSAAPSARELSLTSQLKKLQETTAQRAKLEIGDIIRVRGHIRMFRGER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATTYYKVDDPVCNVQIARMLELPAIYRKVYD 179
>gi|345792767|ref|XP_535005.3| PREDICTED: CST complex subunit STN1 [Canis lupus familiaris]
Length = 367
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L+L + F +G + + EI+GT+ R K + F + VDD TG +
Sbjct: 27 AKLYIRDILNLKESRQVQGVFFYNGHPIKQVEILGTVIGRREKDA-FYSYGVDDSTGVIN 85
Query: 69 CVLWL--NHLTSLYLPRRDPSTVRLIAGVAT------------DFAAKIKIGLVARVRGR 114
C+ W N++ S S+ AGV + + KI+IG + ++RG
Sbjct: 86 CICWKKSNNIES--------SSAASTAGVLSLTSQLKKLQETIEQKTKIEIGDIIQIRGY 137
Query: 115 IASYRGDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +YR + +I V+ DP N+++ L+ + RK YD
Sbjct: 138 VHTYREEREIRVTTFYKVDDPVCNIQIARMLELPSIYRKVYD 179
>gi|355708517|gb|AES03292.1| oligonucleotide/oligosaccharide-binding fold containing 1 [Mustela
putorius furo]
Length = 271
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F G + + EI+GT+ R K F + VDD TG + C
Sbjct: 49 KLYIGDILDLKESRQVPGVFFYKGHPIKQVEILGTVIERREK-DAFYSYGVDDSTGVINC 107
Query: 70 VLWL---NH-----------LTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRI 115
+ W NH L +L L S ++ + + KI+IG + ++RG +
Sbjct: 108 ICWKKLNNHEASSATTATATLGALNLT----SQLKKLQD-TIEQKTKIEIGDIVQIRGYV 162
Query: 116 ASYRGDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+YR + +I V+ DP N+++ L+ R+ RK YD
Sbjct: 163 HTYREEREIRVTTYYKVDDPVCNIQISRMLELPRIYRKVYD 203
>gi|395828137|ref|XP_003787242.1| PREDICTED: CST complex subunit STN1 [Otolemur garnettii]
Length = 371
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F +G + + +I+GT+ + + + F + VDD TG + C
Sbjct: 28 KLYIRDILDLKESRQVPGIFLYNGHPIKQVDILGTVIEVNERDA-FYSYGVDDSTGVIKC 86
Query: 70 VLWLNHLTSLYLPRRDPSTVRLIAGV--------ATDFAAKIKIGLVARVRGRIASYRGD 121
V W + LP PST ++ A K++IG V R+RG I +YR
Sbjct: 87 VCWKKQSDTESLPAA-PSTAGELSLTSQLQKLREAIKQKTKLEIGDVIRIRGYIRTYREQ 145
Query: 122 VQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 REIHATAYYKVDDPVWNIQIARMLELPIIYRKVYD 180
>gi|20810308|gb|AAH29548.1| Obfc1 protein [Mus musculus]
Length = 371
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P T+ +G + R +I+G + S + + F + VDD TG +
Sbjct: 27 AKLYIKDILEMKESQQVPGTYFYNGHPIRRVDIMGAVISVKERET-FYSYGVDDATGVIN 85
Query: 69 CVLW--LNHLTSLYLP-----RRDPSTVRLIAGVATDFAAKIKIGL--VARVRGRIASYR 119
CV W L++ S P R+ S + + K +IG+ + RVRG + +R
Sbjct: 86 CVCWKKLSNAESSSDPAILSTARELSMTSQLKKLQETIEQKTRIGIGDIIRVRGSVRMFR 145
Query: 120 GDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP NM++ L+ +L +K YD
Sbjct: 146 EEREICANIYYKVDDPVWNMQIARMLELPKLYQKVYD 182
>gi|28827826|ref|NP_780569.1| CST complex subunit STN1 [Mus musculus]
gi|292495040|sp|Q8K2X3.2|STN1_MOUSE RecName: Full=CST complex subunit STN1; AltName:
Full=Alpha-accessory factor of 44 kDa; Short=AAF-44;
Short=AAF44; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
gi|26344359|dbj|BAC35830.1| unnamed protein product [Mus musculus]
gi|74147299|dbj|BAE27540.1| unnamed protein product [Mus musculus]
gi|74216696|dbj|BAE37766.1| unnamed protein product [Mus musculus]
gi|148710089|gb|EDL42035.1| oligonucleotide/oligosaccharide-binding fold containing 1 [Mus
musculus]
Length = 378
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P T+ +G + R +I+G + S + + F + VDD TG +
Sbjct: 34 AKLYIKDILEMKESQQVPGTYFYNGHPIRRVDIMGAVISVKERET-FYSYGVDDATGVIN 92
Query: 69 CVLW--LNHLTSLYLP-----RRDPSTVRLIAGVATDFAAKIKIGL--VARVRGRIASYR 119
CV W L++ S P R+ S + + K +IG+ + RVRG + +R
Sbjct: 93 CVCWKKLSNAESSSDPAILSTARELSMTSQLKKLQETIEQKTRIGIGDIIRVRGSVRMFR 152
Query: 120 GDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP NM++ L+ +L +K YD
Sbjct: 153 EEREICANIYYKVDDPVWNMQIARMLELPKLYQKVYD 189
>gi|444517561|gb|ELV11664.1| CST complex subunit STN1 [Tupaia chinensis]
Length = 352
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + P F +G + + +I+GT+ + + F + VDD TG +
Sbjct: 9 AKLYIRDILDLKESQQVPGIFLYNGHPIKQVDILGTVIGTRERDA-FYSYGVDDSTGVIN 67
Query: 69 CVLW--LNHLTSL----YLPRRDPSTVRLIAGVAT-DFAAKIKIGLVARVRGRIASYRGD 121
C+ W L H S R T +L T D KI+IG V R+RG + +YR +
Sbjct: 68 CICWKKLGHTESSPAAPTAARASSLTSQLKKLQETNDQKTKIEIGDVVRIRGYVRTYREE 127
Query: 122 VQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
++ + DP N+++ L+ + RK YD
Sbjct: 128 REVHATAYYKVDDPVWNIQIARMLELPNIYRKVYD 162
>gi|74179582|dbj|BAE22465.1| unnamed protein product [Mus musculus]
Length = 351
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P T+ +G + R +I+G + S + + F + VDD TG +
Sbjct: 34 AKLYIKDILEMKESQQVPGTYFYNGHPIRRVDIMGAVISVKERET-FYSYGVDDATGVIN 92
Query: 69 CVLW--LNHLTSLYLP-----RRDPSTVRLIAGVATDFAAKIKIGL--VARVRGRIASYR 119
CV W L++ S P R+ S + + K +IG+ + RVRG + +R
Sbjct: 93 CVCWKKLSNAESSSDPAILSTARELSMTSQLKKLQETIEQKTRIGIGDIIRVRGSVRMFR 152
Query: 120 GDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP NM++ L+ +L +K YD
Sbjct: 153 EEREICANIYYKVDDPVWNMQIARMLELPKLYQKVYD 189
>gi|449275577|gb|EMC84390.1| Oligonucleotide/oligosaccharide-binding fold-containing protein 1
[Columba livia]
Length = 378
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 26 PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHL---TSLYLP 82
P F +G + + ++VG + R + + F + VDD TG + CV W N + TSL
Sbjct: 44 PGIFFYNGHPVRQVDVVGIVVQRKERDA-FFNYGVDDSTGVINCVCWKNPMVLETSLSGR 102
Query: 83 RRDPSTVRLIAGVA-----TDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDP-- 135
R PS++ ++ + +++IG V RVRG+I +YR ++ DP
Sbjct: 103 PRTPSSLTVLEQMKKLQEMVSQKTRLEIGDVVRVRGQIRTYRQQREVQALCFYKVDDPVC 162
Query: 136 NMEVLHWLDCLRLARKRYD 154
++++ L+ L R+ YD
Sbjct: 163 DVQISRMLELPCLYREVYD 181
>gi|320462764|dbj|BAJ65436.1| CST complex subunit STN1 [Xenopus laevis]
Length = 367
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L+ + P F G + + +I+GT+ K + F + VDD TG + C
Sbjct: 25 KLYIKDILELSESKQVPGIFFYKGHPIKQVDILGTVVFVREKEN-FYSYGVDDSTGVISC 83
Query: 70 VLWL--------NHLTSLYLPRRDPSTVRLIAGVATDF------AAKIKIGLVARVRGRI 115
W N T+ RR PS+ + + + + AK+ IG + RVRG I
Sbjct: 84 TCWKSTAQTEVSNQETA---ARRIPSSSKDLDAIMKELYKEENKKAKMDIGDIIRVRGSI 140
Query: 116 ASYRGDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+R +I S +DP ++++ LD + R YD
Sbjct: 141 KVFREQREIVASVFYKVEDPTLDIQMARMLDLPYMYRNVYD 181
>gi|338716590|ref|XP_001499472.3| PREDICTED: CST complex subunit STN1 [Equus caballus]
Length = 368
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F +G + + +I+GT+ K + F + VDD TG + C
Sbjct: 28 KLYIRDILDLKESRQVPGIFFYNGHPIKQVDILGTVIGVREKDA-FYSYGVDDSTGVINC 86
Query: 70 VLW--LNHLTSLYLPR--RDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDVQ 123
+ W LN+ S RD S + + KI+IG + R+RG + +YR + +
Sbjct: 87 ICWKKLNNTESSSAASSTRDRSLTSQLKKLQETIEQRTKIEIGDIIRIRGYVRTYREERE 146
Query: 124 ITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
I + DP N+++ L+ + RK YD
Sbjct: 147 IHATAYYKVDDPVCNIQIARMLELPSIYRKVYD 179
>gi|116003915|ref|NP_001070317.1| CST complex subunit STN1 [Bos taurus]
gi|122132203|sp|Q08DB2.1|STN1_BOVIN RecName: Full=CST complex subunit STN1; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
gi|115305224|gb|AAI23848.1| Oligonucleotide/oligosaccharide-binding fold containing 1 [Bos
taurus]
gi|296472683|tpg|DAA14798.1| TPA: oligonucleotide/oligosaccharide-binding fold containing 1 [Bos
taurus]
Length = 370
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + F +G + + +I+GT+ K + F + VDD TG +
Sbjct: 27 AKLYIRDILDLKESGQVQGVFFYNGHPIKQVDILGTVIGVREKDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYL----PRRDPSTVRLIAGVATDFA--AKIKIGLVARVRGRIASYRG 120
C+ W LN+ S R+ S + + A AK++IG + RVRG I +RG
Sbjct: 86 CICWKRLNNTKSSSATATPSARELSLTSQLKKLQETIAQRAKLEIGDIIRVRGHIRMFRG 145
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP N+++ L+ + RK YD
Sbjct: 146 EREIHATTYYKVDDPVCNVQIARMLELPAIYRKVYD 181
>gi|440912383|gb|ELR61953.1| CST complex subunit STN1 [Bos grunniens mutus]
Length = 371
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + F +G + + +I+GT+ K + F + VDD TG + C
Sbjct: 28 KLYIRDILDLKESGQVQGVFFYNGHPIKQVDILGTVIGVREKDA-FYSYGVDDSTGVINC 86
Query: 70 VLW--LNH----LTSLYLPRRDPSTVRLIAGVATDFA--AKIKIGLVARVRGRIASYRGD 121
+ W LN+ + R+ S I + A AK++IG + RVRG I +RG+
Sbjct: 87 ICWKRLNNTKSSSATAAPSARELSLTPQIKKLQETIAQRAKLEIGDIIRVRGHIRMFRGE 146
Query: 122 VQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 147 REIHATTYYKVDDPVCNVQIARMLELPAIYRKVYD 181
>gi|354506197|ref|XP_003515151.1| PREDICTED: CST complex subunit STN1 [Cricetulus griseus]
gi|344252309|gb|EGW08413.1| Oligonucleotide/oligosaccharide-binding fold-containing protein 1
[Cricetulus griseus]
Length = 378
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L + + P + +G + R +I+GT+ S + + F + VDD TG + C
Sbjct: 35 KLYIRDILEMKESHQVPGIYIYNGHPIRRVDILGTVISVRERET-FYSYGVDDATGVINC 93
Query: 70 VLW--LNHLTSLYLPRRDPSTVRLIAGVAT--------DFAAKIKIGLVARVRGRIASYR 119
W L++ S P PST R ++ + + KI+IG V RVRG + +R
Sbjct: 94 TCWKKLDNAKSSPDPAA-PSTARELSMTSQLKKLQETMEQKTKIEIGDVIRVRGYVREFR 152
Query: 120 GDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP N+++ L+ L ++ YD
Sbjct: 153 KEREICATLYYKVDDPVWNIQIARMLELPALYKRIYD 189
>gi|348579023|ref|XP_003475281.1| PREDICTED: CST complex subunit STN1-like [Cavia porcellus]
Length = 368
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L++ + P F +G + + +I+GT+ K + F + VDD TG +
Sbjct: 26 AKLYIRDILTMKESRQVPGIFFYNGHPVKQVDILGTVIGVKEKDA-FYGYGVDDSTGVIN 84
Query: 69 CVLWLNHLTSLYLPRRDPSTVRLIAGVAT--------DFAAKIKIGLVARVRGRIASYRG 120
C+ W + P PS+ ++ ++ + +I+IG + R+RG I +YR
Sbjct: 85 CICWKKSRNTESSPAA-PSSAGELSMISKLEKLQETIEQRTRIEIGDIIRIRGFIRTYRE 143
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP N+++ L+ L R+ YD
Sbjct: 144 EREIHATTYYKVDDPMWNIQIARMLELPDLYRRIYD 179
>gi|351715641|gb|EHB18560.1| Oligonucleotide/oligosaccharide-binding fold-containing protein 1
[Heterocephalus glaber]
Length = 367
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L++ + P F +G + + +I+GT+ + + F + VDD TG +
Sbjct: 26 AKLYIRDILAMKESHQVPGIFLYNGHPIKQIDILGTVIGVRERDA-FYSYGVDDSTGVIN 84
Query: 69 CVLWLNHLTSLYLPRRDPSTVRLIAGVAT--------DFAAKIKIGLVARVRGRIASYRG 120
C+ W L++ PS+ R ++ ++ + KI+IG V R+RG I +YR
Sbjct: 85 CICW-KKLSNTETSPAAPSSARELSVISELEKLQETIEQRTKIEIGDVIRIRGYIRTYR- 142
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP N+++ L+ L R+ YD
Sbjct: 143 EREIHAATYYKVDDPMWNIQIARMLELPDLYRRVYD 178
>gi|149040342|gb|EDL94380.1| rCG57571, isoform CRA_a [Rattus norvegicus]
Length = 377
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L + + P + +G + R +I+G + S + + F + VDD TG + C
Sbjct: 35 KLYIKDILEMKESQQVPGMYFYNGHPIRRVDIMGAVISVKERET-FYSYGVDDATGVINC 93
Query: 70 VLWL---NHLTS----LYLPRRDPSTVRLIAGVATDFAAKIKIGL--VARVRGRIASYRG 120
V W N +S + R+ S + + K KIG+ + RVRG + +R
Sbjct: 94 VCWKRPSNAESSSDPAILSTSRELSMTSQLKKLQETIEQKTKIGIGDIIRVRGYVRMFRE 153
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP NM++ L+ L +K YD
Sbjct: 154 EREICATIYYKVDDPVWNMQIARMLELPELYKKVYD 189
>gi|296221152|ref|XP_002756623.1| PREDICTED: CST complex subunit STN1 [Callithrix jacchus]
Length = 368
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F +G + + +++GT+ + + F + VDD TG + C
Sbjct: 28 KLYIRDILDLKESRQVPGVFLYNGHPIKQVDVLGTVIGVRERDA-FYSYGVDDSTGVINC 86
Query: 70 VLW--LNHLTSLYLPR--RDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDVQ 123
+ W LN ++ P R+ S + + KI+IG + RVRG I YR + +
Sbjct: 87 ICWKKLNTESASAAPSVARELSLTSQLKKLQETIEQRTKIEIGDMIRVRGSIRMYREERE 146
Query: 124 ITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
I + DP N+++ L+ + RK YD
Sbjct: 147 IHATAYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|149634570|ref|XP_001512243.1| PREDICTED: CST complex subunit STN1-like [Ornithorhynchus anatinus]
Length = 370
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L++ + P F +G + + +I+GT+ + + FI + VDD TG + C
Sbjct: 27 KLYIRDILNIKESKQVPGIFLYNGHPIKQVDILGTVIGMKEREAFFI-YGVDDSTGVINC 85
Query: 70 VLWLNHLTSLYLPR-RDPSTV---------RLIAGVATDFAAKIKIGLVARVRGRIASYR 119
+ W N S P P TV + + V +++IG + R+RG I YR
Sbjct: 86 ICWKNERDSKTSPAGTQPCTVSGPYLTTQLKKLQEVLRQ-KTQLEIGDIIRIRGHIRVYR 144
Query: 120 GDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
++ S DP ++++ L+ + RK YD
Sbjct: 145 DQREVQASTYYRVNDPVWDVQIARMLELPDIYRKIYD 181
>gi|417399801|gb|JAA46886.1| Putative single-stranded dna-binding replication protein a rpa
medium 30 kd subunit [Desmodus rotundus]
Length = 368
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + P F +G + + +I+GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDLKESRQVPGVFFYNGHPIKQVDILGTVIGVRER-NAFYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHL--TSLYLPRRDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDV 122
C+ W LN+ +S R+ S + + KI+IG + RVRG + ++R +
Sbjct: 86 CICWKKLNNTESSSAAPSARELSLTSQLKKLQESIEQRTKIEIGDIVRVRGYVRTFREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N ++ L+ + RK YD
Sbjct: 146 EIHATSYCKVDDPVCNTQIARMLELPSVYRKVYD 179
>gi|58865456|ref|NP_001011943.1| CST complex subunit STN1 [Rattus norvegicus]
gi|62900633|sp|Q6AYD2.1|STN1_RAT RecName: Full=CST complex subunit STN1; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
gi|50925683|gb|AAH79096.1| Oligonucleotide/oligosaccharide-binding fold containing 1 [Rattus
norvegicus]
Length = 408
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L + + P + +G + R +I+G + S + + F + VDD TG + C
Sbjct: 35 KLYIKDILEMKESQQVPGMYFYNGHPIRRVDIMGAVISVKERET-FYSYGVDDATGVINC 93
Query: 70 VLWL---NHLTS----LYLPRRDPSTVRLIAGVATDFAAKIKIGL--VARVRGRIASYRG 120
V W N +S + R+ S + + K KIG+ + RVRG + +R
Sbjct: 94 VCWKRPSNAESSSDPAILSTSRELSMTSQLKKLQETIEQKTKIGIGDIIRVRGYVRMFRE 153
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP NM++ L+ L +K YD
Sbjct: 154 EREICATIYYKVDDPVWNMQIARMLELPELYKKVYD 189
>gi|389851476|ref|YP_006353710.1| hypothetical protein Py04_0029 [Pyrococcus sp. ST04]
gi|388248782|gb|AFK21635.1| hypothetical protein Py04_0029 [Pyrococcus sp. ST04]
Length = 270
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
+R G+ + RA+IVGT+ + + KF +DDGTG V+W+ L RD
Sbjct: 34 TRYGRKIYRAKIVGTVVREPLIAEDETYGKFQIDDGTG----VIWV-------LGFRDD- 81
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T FA +K G + +V G+IA +R D QI V V PNM +LH + L+
Sbjct: 82 ---------TKFAKLVKKGDLVQVIGKIAEWRDDKQILVEGVA-RVHPNMWILHRYEALK 131
>gi|194394165|ref|NP_079204.2| CST complex subunit STN1 [Homo sapiens]
gi|62900737|sp|Q9H668.2|STN1_HUMAN RecName: Full=CST complex subunit STN1; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
gi|119570004|gb|EAW49619.1| oligonucleotide/oligosaccharide-binding fold containing 1, isoform
CRA_a [Homo sapiens]
gi|119570005|gb|EAW49620.1| oligonucleotide/oligosaccharide-binding fold containing 1, isoform
CRA_a [Homo sapiens]
Length = 368
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F +G + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNGHPIKQVDVLGTVIGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVAT--DFAAKIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIEQKTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATTYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|10438990|dbj|BAB15396.1| unnamed protein product [Homo sapiens]
gi|16924252|gb|AAH17400.1| Oligonucleotide/oligosaccharide-binding fold containing 1 [Homo
sapiens]
Length = 368
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F +G + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNGHPIKQVDVLGTVIGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVAT--DFAAKIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIEQKTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATAYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|312152368|gb|ADQ32696.1| oligonucleotide/oligosaccharide-binding fold containing 1
[synthetic construct]
Length = 368
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F +G + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNGHPIKQVDVLGTVIGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVAT--DFAAKIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIEQKTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATAYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|432113011|gb|ELK35589.1| CST complex subunit STN1 [Myotis davidii]
Length = 368
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F +G + + +I+GT+ + + F + VDD TG + C
Sbjct: 28 KLYIRDILDLKESCQVPGVFFYNGHPIRQVDILGTVIGVRER-NTFYSYGVDDSTGVINC 86
Query: 70 VLWLN----HLTSLYLPRRDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDVQ 123
+ W N +S R+ S + + KI+IG + RVRG + +YR + +
Sbjct: 87 ICWKNLTDTASSSAAPSARELSLTSQLKKLQETIEQRTKIEIGDIIRVRGYVRTYREERE 146
Query: 124 ITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
I + DP N+++ L+ + RK YD
Sbjct: 147 IHATVHYKVDDPICNIQIARMLELPSIYRKVYD 179
>gi|114632689|ref|XP_508016.2| PREDICTED: CST complex subunit STN1 isoform 2 [Pan troglodytes]
gi|397510417|ref|XP_003825593.1| PREDICTED: CST complex subunit STN1 [Pan paniscus]
gi|426366085|ref|XP_004050095.1| PREDICTED: CST complex subunit STN1 [Gorilla gorilla gorilla]
gi|410214622|gb|JAA04530.1| oligonucleotide/oligosaccharide-binding fold containing 1 [Pan
troglodytes]
gi|410253876|gb|JAA14905.1| oligonucleotide/oligosaccharide-binding fold containing 1 [Pan
troglodytes]
gi|410300454|gb|JAA28827.1| oligonucleotide/oligosaccharide-binding fold containing 1 [Pan
troglodytes]
gi|410355101|gb|JAA44154.1| oligonucleotide/oligosaccharide-binding fold containing 1 [Pan
troglodytes]
Length = 368
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F +G + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNGHPIKQVDVLGTVIGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIEQRTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATAYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|388453435|ref|NP_001253519.1| CST complex subunit STN1 [Macaca mulatta]
gi|75076890|sp|Q4R804.1|STN1_MACFA RecName: Full=CST complex subunit STN1; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
gi|67968822|dbj|BAE00768.1| unnamed protein product [Macaca fascicularis]
gi|355783079|gb|EHH65000.1| hypothetical protein EGM_18338 [Macaca fascicularis]
gi|387542194|gb|AFJ71724.1| CST complex subunit STN1 [Macaca mulatta]
Length = 368
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F +G + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNGHPIKQVDVLGTVVGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVATDFA--AKIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIERRTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATAYYKVDDPVWNIQIARMLELPTIYRKIYD 179
>gi|332212746|ref|XP_003255480.1| PREDICTED: CST complex subunit STN1 [Nomascus leucogenys]
Length = 368
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F +G + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNGHPIKQVDVLGTVIGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIEQRTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATAYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|297687334|ref|XP_002821171.1| PREDICTED: CST complex subunit STN1 [Pongo abelii]
Length = 368
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F +G + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNGHPIKQVDVLGTVIGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIEQRTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHAAAYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|355562758|gb|EHH19352.1| hypothetical protein EGK_20040 [Macaca mulatta]
gi|380789681|gb|AFE66716.1| CST complex subunit STN1 [Macaca mulatta]
gi|383421737|gb|AFH34082.1| CST complex subunit STN1 [Macaca mulatta]
Length = 368
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F +G + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNGHPIKQVDVLGTVVGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVATDFA--AKIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIERRTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATAYYKVDDPVWNIQIARMLELPTIYRKIYD 179
>gi|343887428|ref|NP_001230614.1| CST complex subunit STN1 [Sus scrofa]
Length = 371
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + P F +G + + +I+GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDLKESRQVPGVFFYNGHPIKQVDILGTVIGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTS----LYLPRRDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRG 120
C+ W LN+ S R+ S + + A KI+IG + ++RG I +YR
Sbjct: 86 CICWKKLNNTDSSSATAATNARELSLTSQLKKLQETIAQRLKIEIGDLVQIRGHIRTYRE 145
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP N+++ L+ + RK YD
Sbjct: 146 EREIHATVYHKVDDPVCNIQIARMLELPTIYRKVYD 181
>gi|156400076|ref|XP_001638826.1| predicted protein [Nematostella vectensis]
gi|156225950|gb|EDO46763.1| predicted protein [Nematostella vectensis]
Length = 757
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 60 VDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYR 119
VDDG+G + C W + DP R+ +++G + V+G+I ++R
Sbjct: 36 VDDGSGSIDCCQW---------QKDDPDEDRIT----------LELGELICVQGKITAFR 76
Query: 120 GDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVVVNKS 160
QITV + +D N EVL WLD L L + Y N S
Sbjct: 77 EKRQITVDFIYPLEDKNSEVLFWLDVLHLRKTVYSKPFNPS 117
>gi|432845284|ref|XP_004065806.1| PREDICTED: CST complex subunit STN1-like [Oryzias latipes]
Length = 355
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 7 NTHVKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTG 65
+ +L D+L +T + P + + + + +++GT+ + + F + VDDGTG
Sbjct: 21 SAFARLYIQDILQMTESVQIPGIYFYNSHPIYKVDVLGTVVYKRER-DNFFCYGVDDGTG 79
Query: 66 CVPCVLWLNHL-------TSLYLPRRDPSTVRLIAGV-----ATDFAAKIKIGLVARVRG 113
+ C+ W L T DP + + A +++IG + RVRG
Sbjct: 80 VINCLCWKGELLKDKDDGTGTAPAPSDPGVFDPVVELKKLKQAQQKRCRLEIGELLRVRG 139
Query: 114 RIASYRGDVQITVSDVVIEKDPNMEV-LHW-LDCLRLARKRYD 154
+ ++R +I+ S DP M V + W +D L R+ YD
Sbjct: 140 SVKTFRQQREISASVFYKVDDPLMAVQIQWMMDVPELYRECYD 182
>gi|327267505|ref|XP_003218541.1| PREDICTED: CST complex subunit STN1-like [Anolis carolinensis]
Length = 361
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
+L D+L +T + P F + + + +I+GT+ + + F + VDDGTG + C
Sbjct: 28 RLYIKDILEMTESKQVPGIFFYNRHPIKQVDILGTLVLIKER-NAFHTYGVDDGTGVISC 86
Query: 70 VLWLNHLT---SLYLPRRDPSTVRLIAGV-----ATDFAAKIKIGLVARVRGRIASYRGD 121
W N L SL + LI + A ++IG + RVRG I YR
Sbjct: 87 TCWKNSLAEQKSLSDFESSSCGLDLIEQIRKLQMAVHKKTNLQIGDLVRVRGSIRVYRQQ 146
Query: 122 VQITVSDVVIEKDPNMEV--LHWLDCLRLARKRYD 154
+I S DP EV L+ RL R YD
Sbjct: 147 REIKASLYYKVDDPAYEVQIARLLELPRLYRDIYD 181
>gi|337284760|ref|YP_004624234.1| hypothetical protein PYCH_12900 [Pyrococcus yayanosii CH1]
gi|334900694|gb|AEH24962.1| hypothetical protein PYCH_12900 [Pyrococcus yayanosii CH1]
Length = 270
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
+R + + RA+IVGT+ + + KF VDDGTG V+W+ L RD
Sbjct: 34 TRDARKIYRAKIVGTVVREPVIAEDETYGKFQVDDGTG----VIWV-------LGFRDD- 81
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T FA +K G + ++ G+IA +R D QI V V + PNM +LH + L+
Sbjct: 82 ---------TKFAKLVKKGDLVQIIGKIAEWRDDKQILVEGVA-KVHPNMWILHRYEALK 131
>gi|291242453|ref|XP_002741122.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 393
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
VK D+L ++ P P ++ + + +I+G + D K ++FI +++DDGTG +
Sbjct: 30 VKFYIKDVLEMSEYPTCPGAYAYLNHPVIKVDIMGYVVEVDEK-TRFISYSIDDGTGAIR 88
Query: 69 CVLWLNHLTS-----------LYLPRRDP------STVRLIAGVATDFAAK-----IKIG 106
CV W TS +Y D ST+ + +A + +K+G
Sbjct: 89 CVCWKPKQTSSADMRFDETFKVYCASNDVSFNNSISTLECLNELANSVSESKSEHVLKLG 148
Query: 107 LVARVRGRIASYRG--DVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYD 154
+RG++ Y+ D+ ++ S + + ++E+ L+ L YD
Sbjct: 149 DFVHIRGKVKEYKKVRDISVSYSKKIDDPTGSIEMARMLELPTLYENVYD 198
>gi|344274761|ref|XP_003409183.1| PREDICTED: CST complex subunit STN1 [Loxodonta africana]
Length = 370
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F +G + + +++GT+ + + F + VDD TG + C
Sbjct: 29 KLYVRDILDLKESRQVPGIFFYNGHPVKQVDVLGTVVGVRERDA-FYSYGVDDSTGVINC 87
Query: 70 VLW-----LNHLTSLYLPRRDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDV 122
+ W ++ P RD S + + KI+IG + R+RG + +YR +
Sbjct: 88 ICWKKLSNTESSSAASNPARDLSLTSQLKKLQETIQQRTKIEIGDLIRIRGYVRTYREER 147
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP + ++ L+ + RK YD
Sbjct: 148 EIHATAYYKVDDPVWSFQISRMLELPVIYRKVYD 181
>gi|449505865|ref|XP_004174912.1| PREDICTED: CST complex subunit STN1 [Taeniopygia guttata]
Length = 314
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 26 PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHL----TSLYL 81
P F +G + + ++VG + + + F + VDD TG + CV W N + + L
Sbjct: 44 PGVFFYNGHPIRQVDVVGIVVQTKERDA-FYNYGVDDSTGVINCVCWKNPMCLTPSLLAG 102
Query: 82 PRRDPSTVRLIAGV-----ATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDP- 135
PS++ + + K++IG V RVRG I +YR +I S DP
Sbjct: 103 HPSTPSSLSVFEQLKKLQETVSQRTKVEIGDVVRVRGHIRTYRQKREIQASCFYKVDDPV 162
Query: 136 -NMEVLHWLDCLRLARKRYD 154
++++ L+ L R+ YD
Sbjct: 163 CDVQISRMLELPCLYREVYD 182
>gi|395502206|ref|XP_003755474.1| PREDICTED: CST complex subunit STN1 [Sarcophilus harrisii]
Length = 512
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 31/164 (18%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
+L D+L++ + P F +G + + +I+GT+ + S F + VDD TG + C
Sbjct: 171 RLYIKDILNIKESQQAPGLFFYNGHPIRQVDILGTVVGVRERES-FYSYGVDDSTGVINC 229
Query: 70 VLWLN-----------------HLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVR 112
+ W + +LTSL+ ++ + D K++IG V R+R
Sbjct: 230 ICWKSSQGTKSSTVCSSMAGGQNLTSLFRKLQE----------SIDKKTKLEIGDVVRMR 279
Query: 113 GRIASYRGDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
G + YR +I S DP N+++ L+ + RK YD
Sbjct: 280 GYVRVYREQREIHASLYYKVDDPVWNVQIARMLELPDIYRKVYD 323
>gi|209880922|ref|XP_002141900.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
gi|209557506|gb|EEA07551.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
Length = 280
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 51 KPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVAR 110
K K++++T++D +G + + W + + + V LI +A D A +G +
Sbjct: 61 KKQKYVEYTINDSSGTIRVIFWFD--------QNIINEVNLIGSIARDNPA---LGTLVD 109
Query: 111 VRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRY 153
+RG I Y +Q+ + + DPN E W+ L +R RY
Sbjct: 110 IRGTIDKYNNKIQVKCFLLRVVDDPNFESFWWIK-LYESRNRY 151
>gi|348534389|ref|XP_003454684.1| PREDICTED: CST complex subunit STN1-like [Oreochromis niloticus]
Length = 370
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 7 NTHVKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTG 65
+ +L D+L +T + P + + +S+ +++GT+ + + F + VDDGTG
Sbjct: 19 SAFARLYIRDILEMTESTQVPGIYFYNLHPISKVDVLGTVVYKRER-EDFFCYGVDDGTG 77
Query: 66 CVPCVLWLNHLTSLYLPRRDPST-VRLIAGVATDFA---------------AKIKIGLVA 109
+ C+ W + L R+PS +L A F ++IG +
Sbjct: 78 VINCLCWKSDLLK---EEREPSKWAQLSAAAQGGFEPVAELQKLRRAQRTRCHLEIGELL 134
Query: 110 RVRGRIASYRGDVQITVSDVVIEKDPNMEV-LHW-LDCLRLARKRYD 154
RVRG + + R +I S DP M V + W ++ +L R+ YD
Sbjct: 135 RVRGPVKTSRQQREIKASTYYKVSDPVMAVQISWMMEAPQLYRQCYD 181
>gi|326923929|ref|XP_003208185.1| PREDICTED: CST complex subunit STN1-like [Meleagris gallopavo]
Length = 365
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 26 PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLT---SLYLP 82
P F +G + + ++VG + + + F + VDD TG + CV W N + SL
Sbjct: 44 PGIFFYNGHPVRQVDVVGMVVQTKEREA-FHSYGVDDSTGVINCVCWKNPMVAERSLSDC 102
Query: 83 RRDPSTVRLIAGVA-----TDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDP-- 135
PS+++++ + K++IG V RVRG + ++R +I S DP
Sbjct: 103 PSTPSSLKVLEQMKKFQEMVSQKTKLEIGDVIRVRGYVRTFRQQREIQSSCFYKVDDPVC 162
Query: 136 NMEVLHWLDCLRLARKRYD 154
++++ L+ L R+ YD
Sbjct: 163 DVQISRMLELPCLYREVYD 181
>gi|375083994|ref|ZP_09731005.1| Rpa32 [Thermococcus litoralis DSM 5473]
gi|374741293|gb|EHR77720.1| Rpa32 [Thermococcus litoralis DSM 5473]
Length = 267
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
++ + + RA+IVGT+ + + KF VDDGTG V+W+ L RD
Sbjct: 34 TKDARKVYRAKIVGTVVREPIIAEDETYGKFQVDDGTG----VIWV-------LGFRDD- 81
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T FA +K G + ++ G+IA +R D QI V V + DPNM +LH + L+
Sbjct: 82 ---------TKFARLVKRGDMVQLIGKIAEWRDDKQILVEGVS-KVDPNMWILHRYEALK 131
>gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT_477538 [Arabidopsis lyrata subsp.
lyrata]
gi|297330185|gb|EFH60604.1| hypothetical protein ARALYDRAFT_477538 [Arabidopsis lyrata subsp.
lyrata]
Length = 278
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 13 LAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLW 72
L LS T + FS G ++ IVG I+ +++ ++ ++F VDDGTG V CV W
Sbjct: 44 LTLKQLSSASTTGESNFSIDGVDINTVAIVGRISRMENRITQ-VEFVVDDGTGWVDCVRW 102
Query: 73 LNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIE 132
R++ T+ +K+G+ R+ G + ++G + V +
Sbjct: 103 CQE-------RQE-----------TEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSIRPV 144
Query: 133 KDPNMEVLHWLDCL 146
D N V H+ +C+
Sbjct: 145 TDFNEIVHHFTECM 158
>gi|431895465|gb|ELK04981.1| Oligonucleotide/oligosaccharide-binding fold-containing protein 1
[Pteropus alecto]
Length = 404
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L L + P F +G + + +I+GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDLKESHQVPGIFFYNGHPIKQVDILGTVIGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLWLNHLTSLYLPRRDPSTVRLIAGVAT--------DFAAKIKIGLVARVRGRIASYRG 120
C+ W ++ P + R ++ + + KI+IG V R+RG I +YR
Sbjct: 86 CMCWKKSNSTE--PSSAAPSAREVSLTSQLKKLQETIEQRTKIEIGDVIRIRGCIHTYRE 143
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP +++ L+ + RK YD
Sbjct: 144 EREIRATAYYKVDDPVCKIQIARMLELPNIYRKVYD 179
>gi|332158152|ref|YP_004423431.1| hypothetical protein PNA2_0510 [Pyrococcus sp. NA2]
gi|331033615|gb|AEC51427.1| hypothetical protein PNA2_0510 [Pyrococcus sp. NA2]
Length = 268
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
++ + + RA+IVGT+ + + KF VDDGTG V+W+ L RD
Sbjct: 34 TKYARKIYRAKIVGTVVREPLIAEDETYGKFQVDDGTG----VIWV-------LGFRDD- 81
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T FA +K G + +V G+IA +R D QI V V + PNM +LH + L+
Sbjct: 82 ---------TKFAKLVKKGDLVQVIGKIAEWRDDKQILVEGVA-KVHPNMWILHRYETLK 131
>gi|14591638|ref|NP_143720.1| hypothetical protein PH1894 [Pyrococcus horikoshii OT3]
gi|3258333|dbj|BAA31016.1| 272aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 272
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
++ + + RA+IVGT+ + + KF VDDGTG V+W+ L RD
Sbjct: 38 TKYARKIYRAKIVGTVVREPLIAEDETYGKFQVDDGTG----VIWV-------LGFRDD- 85
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T FA +K G + +V G+IA +R D QI V V + PNM +LH + L+
Sbjct: 86 ---------TKFAKLVKKGDLVQVIGKIAEWRDDKQILVEGVA-KVHPNMWILHRYETLK 135
>gi|403259560|ref|XP_003922275.1| PREDICTED: CST complex subunit STN1 [Saimiri boliviensis
boliviensis]
Length = 368
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F +G + + +++GT+ + + F + VDD TG + C
Sbjct: 28 KLYIRDILDLKESRQVPGVFLYNGHPIKQVDVLGTVIGVRERDA-FYSYGVDDSTGVINC 86
Query: 70 VLW--LN--HLTSLYLPRRDPSTVRLIAGVATDFAA--KIKIGLVARVRGRIASYRGDVQ 123
+ W LN ++ R+ S + + K++IG RVRG I +YR + +
Sbjct: 87 ICWKKLNTESASAAPSAARELSLTSQLKKLQETIEQRTKLEIGDTIRVRGSIRTYREERE 146
Query: 124 ITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
I + DP N+++ L+ + RK YD
Sbjct: 147 IHATIYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|315231759|ref|YP_004072195.1| hypothetical protein TERMP_01998 [Thermococcus barophilus MP]
gi|315184787|gb|ADT84972.1| hypothetical protein TERMP_01998 [Thermococcus barophilus MP]
Length = 267
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 26/121 (21%)
Query: 30 SRSGKLLSRAEIVGTITSRD---HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDP 86
++ + + RA+IV T+ RD + + KF VDDGTG V+W+ L RD
Sbjct: 34 TKDARKVYRAKIVATVV-RDPVIAEDETYGKFQVDDGTG----VIWV-------LGFRDD 81
Query: 87 STVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCL 146
T FA +K G + ++ G+IA +RGD QI V V + PNM +LH + L
Sbjct: 82 ----------TKFAKLVKKGDLVQIIGKIAEWRGDKQILVEGVS-KVHPNMWILHRYETL 130
Query: 147 R 147
+
Sbjct: 131 K 131
>gi|33359589|ref|NP_579747.2| hypothetical protein PF2018 [Pyrococcus furiosus DSM 3638]
gi|14020869|dbj|BAB47565.1| RPA32 [Pyrococcus furiosus]
Length = 273
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
++ + + RA+IVGT+ + + KF +DDGTG V+W+ L RD
Sbjct: 38 TKDARKIYRAKIVGTVIREPLIAEDETYGKFQIDDGTG----VIWV-------LGFRDD- 85
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T FA +K G + +V G+IA +R D QI V V + PNM +LH + L+
Sbjct: 86 ---------TKFAKLVKKGDLVQVIGKIAEWRDDKQILVEGVA-KVHPNMWILHRYETLK 135
>gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp. lyrata]
gi|297326427|gb|EFH56847.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp. lyrata]
Length = 279
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 32 SGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRL 91
+G L+ +VG + +D ++FT+DDGTG + C W+N R+ +VR
Sbjct: 66 NGISLTNVSLVGLVCDKDVSKVTEVRFTLDDGTGRIDCKRWVNET----FDAREMESVR- 120
Query: 92 IAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARK 151
G RV G + +++G Q+ V V D N H+++C+ +
Sbjct: 121 -------------DGTYVRVNGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQ 167
Query: 152 RYD 154
+
Sbjct: 168 NSE 170
>gi|397652335|ref|YP_006492916.1| hypothetical protein PFC_08470 [Pyrococcus furiosus COM1]
gi|18894228|gb|AAL82142.1| hypothetical protein PF2018 [Pyrococcus furiosus DSM 3638]
gi|393189926|gb|AFN04624.1| hypothetical protein PFC_08470 [Pyrococcus furiosus COM1]
Length = 269
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
++ + + RA+IVGT+ + + KF +DDGTG V+W+ L RD
Sbjct: 34 TKDARKIYRAKIVGTVIREPLIAEDETYGKFQIDDGTG----VIWV-------LGFRDD- 81
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T FA +K G + +V G+IA +R D QI V V + PNM +LH + L+
Sbjct: 82 ---------TKFAKLVKKGDLVQVIGKIAEWRDDKQILVEGVA-KVHPNMWILHRYETLK 131
>gi|6728969|gb|AAF26967.1|AC018363_12 putative replication factor A [Arabidopsis thaliana]
Length = 282
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 19/134 (14%)
Query: 13 LAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLW 72
L LS T + FS G + IVG I+ +++ ++ + F VDDGTG V CV W
Sbjct: 44 LTLKQLSSASTTGESNFSIDGVDIKTVVIVGRISRMENRITQ-VDFVVDDGTGWVDCVRW 102
Query: 73 LNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIE 132
+ A T+ +K+G+ R+ G + ++G + V V
Sbjct: 103 CH------------------ARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPV 144
Query: 133 KDPNMEVLHWLDCL 146
D N V H+ +C+
Sbjct: 145 TDFNEIVHHFTECM 158
>gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidopsis thaliana]
gi|332640359|gb|AEE73880.1| replication factor A2 [Arabidopsis thaliana]
Length = 298
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 19/134 (14%)
Query: 13 LAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLW 72
L LS T + FS G + IVG I+ +++ ++ + F VDDGTG V CV W
Sbjct: 64 LTLKQLSSASTTGESNFSIDGVDIKTVVIVGRISRMENRITQ-VDFVVDDGTGWVDCVRW 122
Query: 73 LNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIE 132
+ A T+ +K+G+ R+ G + ++G + V V
Sbjct: 123 CH------------------ARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPV 164
Query: 133 KDPNMEVLHWLDCL 146
D N V H+ +C+
Sbjct: 165 TDFNEIVHHFTECM 178
>gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis thaliana]
gi|75330048|sp|Q8LFJ8.1|RFA2B_ARATH RecName: Full=Replication protein A 32 kDa subunit B;
Short=AtRPA32B; Short=RP-A p32 B; AltName: Full=DNA
replication protein A2 subunit B; AltName:
Full=Replication factor A protein 2 B; Short=AtRPA2 B;
Short=RF-A protein 2 B; AltName: Full=Replicon protein
A2 B
gi|21537031|gb|AAM61372.1| putative replication factor A [Arabidopsis thaliana]
gi|26450657|dbj|BAC42439.1| putative replication factor A [Arabidopsis thaliana]
gi|90186248|gb|ABD91500.1| At3g02920 [Arabidopsis thaliana]
gi|332640358|gb|AEE73879.1| replication factor A2 [Arabidopsis thaliana]
Length = 278
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 19/134 (14%)
Query: 13 LAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLW 72
L LS T + FS G + IVG I+ +++ ++ + F VDDGTG V CV W
Sbjct: 44 LTLKQLSSASTTGESNFSIDGVDIKTVVIVGRISRMENRITQ-VDFVVDDGTGWVDCVRW 102
Query: 73 LNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIE 132
+ A T+ +K+G+ R+ G + ++G + V V
Sbjct: 103 CH------------------ARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPV 144
Query: 133 KDPNMEVLHWLDCL 146
D N V H+ +C+
Sbjct: 145 TDFNEIVHHFTECM 158
>gi|402881413|ref|XP_003904268.1| PREDICTED: CST complex subunit STN1 [Papio anubis]
Length = 368
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P F + + + +++GT+ + + F + VDD TG +
Sbjct: 27 AKLYIRDILDMKESRQVPGVFLYNRHPIKQVDVLGTVVGVRERDA-FYSYGVDDSTGVIN 85
Query: 69 CVLW--LNHLTSLYLPR--RDPSTVRLIAGVATDFA--AKIKIGLVARVRGRIASYRGDV 122
C+ W LN + P R+ S + + KI+IG RVRG I +YR +
Sbjct: 86 CICWKKLNTESVSAAPSAARELSLTSQLKKLQETIERRTKIEIGDTIRVRGSIRTYREER 145
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ L+ + RK YD
Sbjct: 146 EIHATAYYKVDDPVWNIQIARMLELPTIYRKVYD 179
>gi|291404775|ref|XP_002718759.1| PREDICTED: hypothetical protein isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L++ + P F +G + + +I+GT+ K + F + VDD TG + C
Sbjct: 34 KLYVRDILAMKESRQVPGIFFYNGHPIKQVDILGTVIGVREKDT-FYSYGVDDSTGVINC 92
Query: 70 VLWLNHLTSLYLPRRDPSTVRLIAGVATDFA---------AKIKIGLVARVRGRIASYRG 120
+ W + + + + F KI+IG + R+RG + +YR
Sbjct: 93 MCWKKSSNTESSSDPAAPSSARELSLTSQFKKLQETIEQKTKIEIGDIVRIRGYVRTYRE 152
Query: 121 DVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+ +I + DP N+++ + + R+ YD
Sbjct: 153 EREIHATTYYKVDDPVWNIQISRMQELPGMYRRVYD 188
>gi|390347095|ref|XP_792047.2| PREDICTED: CST complex subunit STN1-like [Strongylocentrotus
purpuratus]
Length = 373
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 8 THVKLLAFDLLSLTP--TPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTG 65
++ +L D++++ P T F+ + R +++G + S + KF + VDDGTG
Sbjct: 24 SYARLYISDIVAMQPYSTGPGDAFAYKNHPIYRVDLMGIVVSVAER-EKFFNYAVDDGTG 82
Query: 66 CVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKI---------------KIGLVAR 110
+ C W RDP T + + AA + ++G +
Sbjct: 83 VIQCCCWKPKRADEL--GRDPQTSS-VGDAEGELAASLFKRMEDSTEESLTSYELGDLIH 139
Query: 111 VRGRIASYRGDVQITVSDVVIEKDPNME 138
VRGR+ +RG+++++ S +DP +
Sbjct: 140 VRGRLKFFRGNIEVSASYFRRIQDPTYQ 167
>gi|291404773|ref|XP_002718758.1| PREDICTED: hypothetical protein isoform 1 [Oryctolagus cuniculus]
Length = 368
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L++ + P F +G + + +I+GT+ K + F + VDD TG + C
Sbjct: 28 KLYVRDILAMKESRQVPGIFFYNGHPIKQVDILGTVIGVREKDT-FYSYGVDDSTGVINC 86
Query: 70 VLW-----LNHLTSLYLPRRDPSTVRLIAGVAT--DFAAKIKIGLVARVRGRIASYRGDV 122
+ W ++ R+ S + + KI+IG + R+RG + +YR +
Sbjct: 87 MCWKKSSNTESSSAAPSSARELSLTSQFKKLQETIEQKTKIEIGDIVRIRGYVRTYREER 146
Query: 123 QITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+I + DP N+++ + + R+ YD
Sbjct: 147 EIHATTYYKVDDPVWNIQISRMQELPGMYRRVYD 180
>gi|323448499|gb|EGB04397.1| hypothetical protein AURANDRAFT_32654 [Aureococcus anophagefferens]
Length = 242
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 15/128 (11%)
Query: 29 FSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPST 88
F+ G+ +++ +VG I +D K +K + +T++D TG + C +W+N +T
Sbjct: 28 FAVDGREVNQVRVVGNILRQDKKETKHV-YTIEDQTGMLECTMWVNQ-------EEAGAT 79
Query: 89 VRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRL 148
V + A K+ G V G + Y G + ++ DV +D N H+L+ +
Sbjct: 80 VE-------ERAEKMVNGSYVCVIGGLKEYNGKLNVSAYDVRPIEDFNEITHHYLEAIYS 132
Query: 149 ARKRYDVV 156
K+ + +
Sbjct: 133 HAKQTNAI 140
>gi|118092956|ref|XP_421742.2| PREDICTED: CST complex subunit STN1 [Gallus gallus]
Length = 363
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 26 PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLN----HLTSLYL 81
P F +G + + ++VG + + + F + VDD TG + C+ W N +S
Sbjct: 44 PGIFFYNGHPVRQVDVVGMVVQTKEREA-FHSYGVDDSTGVINCICWKNPVVGERSSSDC 102
Query: 82 PRRDPSTVRLIAGVA-----TDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDP- 135
P PS+++++ + K++IG V RVRG + ++R +I S DP
Sbjct: 103 P-STPSSLKVLEQMKKFQEMVSQKTKLEIGDVIRVRGYVRTFRQQREIQSSCFYKVDDPV 161
Query: 136 -NMEVLHWLDCLRLARKRYD 154
++++ L+ L R+ YD
Sbjct: 162 CDVQISRMLELPWLYREVYD 181
>gi|256072520|ref|XP_002572583.1| hypothetical protein [Schistosoma mansoni]
Length = 437
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 21/140 (15%)
Query: 5 LQNTHVKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
L N H +LL +L + F + L +IVG + + ++ +F +DDGT
Sbjct: 63 LANEHYQLLLGELSEIQLVGSNGPFRLGHRWLLFVDIVGIVRTV-YERERFFIVDLDDGT 121
Query: 65 GCVPCVLWL----NHLTSLYLPRRD---------------PSTVRLIAGVATDFAAKIKI 105
GC+ C +W NH L + + R I+ A ++ + I
Sbjct: 122 GCITCTIWRRDCSNHFNVLSITKNSFDFEQHYLCEQLIKLSCKSRPISSSAKQ-SSNLNI 180
Query: 106 GLVARVRGRIASYRGDVQIT 125
G + ++RGR+ +RG +++
Sbjct: 181 GQILQLRGRLRCFRGKLKLN 200
>gi|14520501|ref|NP_125976.1| hypothetical protein PAB2165 [Pyrococcus abyssi GE5]
gi|5457716|emb|CAB49207.1| RPA32 subunit of the hetero-oligomeric complex involved in
homologous recombination [Pyrococcus abyssi GE5]
gi|380741027|tpe|CCE69661.1| TPA: hypothetical protein PAB2165 [Pyrococcus abyssi GE5]
Length = 272
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
++ + + RA+IVGT+ + + KF VDDGTG V+W+ L RD
Sbjct: 38 TKYARKVYRAKIVGTVVREPLIAEDETYGKFQVDDGTG----VIWV-------LGFRDD- 85
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T FA ++ G + +V G+IA +R D QI V V + PNM +LH + L+
Sbjct: 86 ---------TKFAKLVRKGDLVQVIGKIAEWRDDKQILVEGVS-KVHPNMWILHRYETLK 135
>gi|320163683|gb|EFW40582.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 279
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 60/169 (35%)
Query: 36 LSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGV 95
++R I+G I+S D + + +T+DDGTG + CV+W R + V +AG
Sbjct: 57 IARIHIMGIISSID-RYNTNTSYTIDDGTGVISCVVW----------NRRRAEVTNLAGN 105
Query: 96 ATD---------------------------------------------FAAKI----KIG 106
AT+ F A + ++G
Sbjct: 106 ATNGAPAALDAVAAVAAAGASAAAAGGGAAGNAPILPVARRAARAGNVFDAPVPAIGELG 165
Query: 107 LVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
+ VRG+++ YR Q+ V+ + E+ P+ E L L+C L RK Y +
Sbjct: 166 DLVSVRGKLSCYREQRQLVVTSMTPERAPDAESLWLLECAHLYRKIYSI 214
>gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis thaliana]
gi|186502765|ref|NP_001118376.1| replicon protein A2 [Arabidopsis thaliana]
gi|75338841|sp|Q9ZQ19.2|RFA2A_ARATH RecName: Full=Replication protein A 32 kDa subunit A;
Short=AtRPA32A; Short=RP-A p32 A; AltName: Full=DNA
replication protein A2 subunit A; AltName: Full=Protein
SUPPRESSOR OF ROS1; AltName: Full=Replication factor A
protein 2 A; Short=AtRPA2 A; Short=RF-A protein 2 A;
AltName: Full=Replicon protein A2 A
gi|20197764|gb|AAD18120.2| putative replication protein A1 [Arabidopsis thaliana]
gi|21594953|gb|AAM66059.1| putative replication protein A1 [Arabidopsis thaliana]
gi|26450159|dbj|BAC42198.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28973057|gb|AAO63853.1| putative replication protein A1 [Arabidopsis thaliana]
gi|82621223|gb|ABB86293.1| DNA replication protein A2 subunit [Arabidopsis thaliana]
gi|330252488|gb|AEC07582.1| replicon protein A2 [Arabidopsis thaliana]
gi|330252489|gb|AEC07583.1| replicon protein A2 [Arabidopsis thaliana]
Length = 279
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 18/117 (15%)
Query: 32 SGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRL 91
+G L+ +VG + +D ++FT+DDGTG + C W+ S R+ +VR
Sbjct: 66 NGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWV----SETFDAREMESVR- 120
Query: 92 IAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRL 148
G R+ G + +++G Q+ V V D N H+++C+
Sbjct: 121 -------------DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHF 164
>gi|358053878|dbj|GAB00011.1| hypothetical protein E5Q_06713 [Mixia osmundae IAM 14324]
Length = 505
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 38 RAEIVGTITS-------RDHKPS----KFIKFTVDDGTGCVPCVLWLNHLTSLYLPRR-- 84
R EIVG + S R PS +++ VDDGT + CV W + L +L L R+
Sbjct: 86 RVEIVGLLVSAIVDTTPRKDNPSVDRLSMVRYAVDDGTAVLECVCWCSEL-ALSLARKGL 144
Query: 85 ----------DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKD 134
D + + K+G + R++G + +R QI V +
Sbjct: 145 RGKMRISRDLDEQLCQEAREGEMQPSEAFKVGTLVRIQGMLELFRQRRQINVRLIEALVS 204
Query: 135 PNMEVLHWLDCLRLARKRY 153
P+ E H ++C RL + Y
Sbjct: 205 PSAEPRHIIECARLKIEVY 223
>gi|52345724|ref|NP_001004908.1| CST complex subunit STN1 [Xenopus (Silurana) tropicalis]
gi|82183525|sp|Q6DJ48.1|STN1_XENTR RecName: Full=CST complex subunit STN1; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
gi|49522343|gb|AAH75336.1| MGC89021 protein [Xenopus (Silurana) tropicalis]
Length = 368
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 21/161 (13%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L L + P F G + + +++GT+ K + F + VDD TG + C
Sbjct: 25 KLYIKDILELKESQQVPGIFFYRGHPIKQVDVLGTVVFVREKEN-FYSYGVDDSTGVISC 83
Query: 70 VLWLNHL-TSLYLPRRDPSTVRLIAGVATDF-------------AAKIKIGLVARVRGRI 115
W + T + P ++ R ++ + D AK+ IG RVRG I
Sbjct: 84 TCWKSTAPTEVSSP---GTSARHVSSSSKDLDVMMRELYKEESKKAKLDIGDTIRVRGSI 140
Query: 116 ASYRGDVQITVSDVVIEKDPNMEV--LHWLDCLRLARKRYD 154
+R +I S +DP +++ D + R YD
Sbjct: 141 KVFRDQREIVASVFYKVEDPKLDIQMARMFDLPYMYRNVYD 181
>gi|300707613|ref|XP_002996007.1| hypothetical protein NCER_100966 [Nosema ceranae BRL01]
gi|239605263|gb|EEQ82336.1| hypothetical protein NCER_100966 [Nosema ceranae BRL01]
Length = 218
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 24/130 (18%)
Query: 33 GKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLI 92
K LS +I+G + S S F V+DGTG + C+LW N Y+
Sbjct: 45 NKELSTLKIIGWVYSVKSTNSGKT-FIVEDGTGEIECMLWANRAYEEYM----------- 92
Query: 93 AGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR--LAR 150
A+ I+ G++ R+ G + + G ITVS++ + +D N + H + ++ L++
Sbjct: 93 -------ASFIEDGILVRIVGTLKEFLGKKNITVSNIYVVEDYNELLYHMITAVKDHLSK 145
Query: 151 KRYDVVVNKS 160
K ++NK
Sbjct: 146 KE---ILNKE 152
>gi|410917458|ref|XP_003972203.1| PREDICTED: CST complex subunit STN1-like [Takifugu rubripes]
Length = 375
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 10 VKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
KL D+L + + P + + + + +I+GT+ + + F + VDDGTG +
Sbjct: 27 AKLYIRDILEMAESTQVPGIYFYNLHPIFKVDILGTVVYKRER-DDFFCYGVDDGTGVIN 85
Query: 69 CVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIK-------------IGLVARVRGRI 115
C+ W N L + PS A + AA+++ IG + RVRG +
Sbjct: 86 CLCWKNDLLKQH---GKPSGCDDDAEGDFNVAAELEKLQQFQYSQCHLDIGELLRVRGPV 142
Query: 116 ASYRGDVQITVSDVVIEKDPNMEV-LHW-LDCLRLARKRYD 154
+ R +I S DP M V + W ++ L R+ YD
Sbjct: 143 KTSRQQREIMASTYYKVNDPMMAVQIEWMMEVPELYRQCYD 183
>gi|47223996|emb|CAG06173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L + + P + + + +++GT+ S+ + + F + VDDGTG + C
Sbjct: 35 KLYVKDILEMAESRQVPGIYFYNLHPIFNVDVLGTVVSKRER-NDFFCYGVDDGTGVINC 93
Query: 70 VLW---LNHLTSLYLPRRDPSTVRLIAG--VATDFA---------AKIKIGLVARVRGRI 115
+ W + L RD + + G VA + + IG + RVRG +
Sbjct: 94 LCWKMTCSRSKRSLLDVRDQHSDGALGGFNVAAELEKLKQIQYNHCHLDIGELLRVRGAV 153
Query: 116 ASYRGDVQITVSDVVIEKDPNMEV-LHW-LDCLRLARKRYD 154
+ R +IT S DP M V + W ++ L R+ YD
Sbjct: 154 KTSRQQREITASTYYKVNDPMMAVQIEWMMEVPELYRQCYD 194
>gi|358336421|dbj|GAA54935.1| CST complex subunit STN1 [Clonorchis sinensis]
Length = 402
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 5 LQNTHVKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
L N H +LL DLL D F + L ++VG + + + KF +DDGT
Sbjct: 36 LANEHYQLLIGDLLRAQAAADLDIFRLGTRWLLYVDLVGLVRTVFER-EKFWSVEIDDGT 94
Query: 65 GCVPCVLWLNH-------LTSLYLPRRDPSTVRLIAGV----------ATDFAAKIKIGL 107
GC+ C +W ++ +S P + R+ + + + +G
Sbjct: 95 GCISCTVWRHNDFPISSSTSSAINPAKSAEYHRICDQLLQLSNRSQPTLSVSRSAFHVGD 154
Query: 108 VARVRGRIASYRGDVQITVSDVVIEKDP 135
+ ++GR+ +RG +++ V DP
Sbjct: 155 MVHLKGRLKRFRGQLKVNVHFCRFLDDP 182
>gi|260808652|ref|XP_002599121.1| hypothetical protein BRAFLDRAFT_225066 [Branchiostoma floridae]
gi|229284397|gb|EEN55133.1| hypothetical protein BRAFLDRAFT_225066 [Branchiostoma floridae]
Length = 368
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 31/181 (17%)
Query: 5 LQNTHVKLLAFDLLSLTPTPD-PA--TFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVD 61
L +VK+ D+L + P PA F+ +SR +++G + R + K + +D
Sbjct: 15 LHRAYVKMFVRDVLEMDTYPGHPAMNVFAYRNHPVSRVDLLGWVV-RVEEREKLFNYAID 73
Query: 62 DGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVAT----------DFAA----KIK--- 104
DGTG + C W + S T G +T DF A +IK
Sbjct: 74 DGTGVIGCTCWKPRVQSTTGEDSMDDTDYSTTGASTSADSAEKEFADFLALKRREIKKCV 133
Query: 105 --------IGLVARVRGRIASYRGDVQITVSDVVIEKDP--NMEVLHWLDCLRLARKRYD 154
+G + VRGRI YRG ++ + DP ++E+ + L+L + YD
Sbjct: 134 RQLKQPARLGDLLHVRGRIKLYRGRREVGAAYFRHVDDPTCSIEINRTMKQLQLYQDFYD 193
Query: 155 V 155
V
Sbjct: 194 V 194
>gi|449437074|ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
sativus]
gi|449519474|ref|XP_004166760.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
sativus]
Length = 271
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 19/123 (15%)
Query: 25 DPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRR 84
+ A F +G ++ IVG ++ + + + I FTVDDGTG + C W+N
Sbjct: 49 EKANFVINGVDITNVTIVGKVSEKAERNTD-ITFTVDDGTGTIGCKRWVNDT-------- 99
Query: 85 DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
T+ +I+ G+ RV G + ++ + QI V + + H+++
Sbjct: 100 ----------FDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIE 149
Query: 145 CLR 147
C+
Sbjct: 150 CIH 152
>gi|242398697|ref|YP_002994121.1| RPA32 [Thermococcus sibiricus MM 739]
gi|242265090|gb|ACS89772.1| RPA32 [Thermococcus sibiricus MM 739]
Length = 267
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRD--HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
++ + + RA+IVGT+ + + KF +DDGTG V+W+ R D
Sbjct: 34 TKDARRVYRAKIVGTVVREPTIAEDETYGKFQIDDGTG----VIWVLGF------RDDTK 83
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
+RL +K G + ++ G++ +R D Q+ V V + DP M +LH + LR
Sbjct: 84 FIRL-----------VKRGDIVQLIGKVGEWRDDKQVLVEGVT-KVDPEMWILHRYETLR 131
>gi|345565861|gb|EGX48809.1| hypothetical protein AOL_s00079g448 [Arthrobotrys oligospora ATCC
24927]
Length = 158
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 17 LLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTG-CVPCVLWLN 74
L+SL+P+ D +T+S +G + IVGT+TS D K + F++DDG+G C+ V +
Sbjct: 30 LVSLSPSFDSESTYSFNGHPIRWISIVGTVTSIDEHEKKIL-FSIDDGSGQCINAVARKD 88
Query: 75 HLTSLYLPR 83
+TS +PR
Sbjct: 89 SMTSKDMPR 97
>gi|224143708|ref|XP_002325047.1| predicted protein [Populus trichocarpa]
gi|222866481|gb|EEF03612.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 19/122 (15%)
Query: 25 DPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRR 84
+ + F G ++ IVG ++ ++ K S++ F VDDGTG + C W+
Sbjct: 58 NESNFIIDGAEVNNVTIVGRVSHKEDKASEYT-FLVDDGTGQIECTKWVQE--------- 107
Query: 85 DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
+ T+ +I +G+ RV G + +G + V + D N H+++
Sbjct: 108 ---------SLDTEQMGEILVGMYVRVHGHLRGLQGRRFLNVFSIRPVTDFNEIPGHFIE 158
Query: 145 CL 146
C+
Sbjct: 159 CI 160
>gi|326431143|gb|EGD76713.1| hypothetical protein PTSG_12677 [Salpingoeca sp. ATCC 50818]
Length = 167
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 32 SGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRL 91
+G+ + A + G +T D K + F+ + VDDGT VPC++W RRD S
Sbjct: 62 NGRHVRLAMLAGIVTEVD-KGTHFVAYKVDDGTAEVPCIVW----------RRDESERH- 109
Query: 92 IAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCL 146
F +++G G + +RG Q+T + E E +HW + +
Sbjct: 110 -----ARF--NLELGCHVLAWGAVTVFRGKRQLTTHGIS-EITAVEEAVHWAEAM 156
>gi|393212752|gb|EJC98251.1| hypothetical protein FOMMEDRAFT_97039 [Fomitiporia mediterranea
MF3/22]
Length = 603
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 25 DPATFSRSGKLLSRA-EIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPR 83
D F G++ R +IVG + D ++F VDDGT + C L P
Sbjct: 102 DNEEFYWMGRVPCRTVKIVGMVVGVDEF-DDMLRFKVDDGTSVIDCDL------KQPKPA 154
Query: 84 RDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWL 143
+ PST +++ +G + V+GRI RG + + + K N E HWL
Sbjct: 155 KPPSTPE----------SRLTVGAIVTVQGRIFHGRGSRYLRLEPAIC-KSANDEPRHWL 203
Query: 144 DCLRLARKRY 153
+ L+L + Y
Sbjct: 204 EVLKLCHEHY 213
>gi|403352426|gb|EJY75728.1| hypothetical protein OXYTRI_02881 [Oxytricha trifallax]
Length = 515
Score = 42.4 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 31 RSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVR 90
R LL++ +I G + + K+I F +DD TG + CVLWLN R R
Sbjct: 164 RDQFLLNKIQICGIMVFIIKREEKYI-FGIDDSTGVMTCVLWLNDNKQGGQSARRNQDFR 222
Query: 91 LIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHW 142
+ A I IG + G + Y+ +Q+ V + D N E+L +
Sbjct: 223 -------NLFANITIGSSLAILGTMEYYKDKIQVNVHKLRPVIDINEEMLQY 267
>gi|428171360|gb|EKX40278.1| hypothetical protein GUITHDRAFT_142987 [Guillardia theta CCMP2712]
Length = 350
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 34 KLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIA 93
+++SR ++G + + + + F++F +DD + + C+LW + D +
Sbjct: 75 RVISRVRLLGDVVAVKDRDN-FVEFKLDDSSDIITCILW----------KSDA----MKP 119
Query: 94 GVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRY 153
G+ + +K+G V G+++ YRG+VQ++V IE++ + W+ + L Y
Sbjct: 120 GLGYE---GVKLGKHLHVGGKLSQYRGEVQLSVWFASIEENVDAMSYFWVKMVDLHLNHY 176
>gi|224126075|ref|XP_002329655.1| predicted protein [Populus trichocarpa]
gi|222870536|gb|EEF07667.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 33 GKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLI 92
G ++ IVG ++ ++ K S++ F +DDGTG + C W+
Sbjct: 69 GAEVNNVTIVGRVSHKEDKASEY-SFLIDDGTGQIECTQWVQE----------------- 110
Query: 93 AGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCL 146
+ T+ +I +G+ RV G + +G + V + D N H+++C+
Sbjct: 111 -SLDTEQMGEILVGMYVRVHGHLRGLQGRRFLNVFSIRPVTDFNEVPNHFIECI 163
>gi|380480904|emb|CCF42163.1| OB-fold nucleic acid binding domain-containing protein
[Colletotrichum higginsianum]
Length = 177
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 39 AEIVGTITSRDHKPSKFIKFTVDDGTG-CVPCVLWLNHLTSLYLPRRDPSTVRLIAGVAT 97
A IVG + + D P + I +TVDD +G C+ CV+ L L P T G
Sbjct: 15 ARIVGIVVAVDDFPGRRI-YTVDDSSGACIECVVVLKTPPLLDTSAPKPDTAGWFNGNRP 73
Query: 98 DFAA-----KIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKR 152
+ +G V ++G +A++R + QI + V I + EV W R R R
Sbjct: 74 QPQPPADCLDVDVGSVVDLKGGLATFREEKQIKIEKVRIIRSTEQEVALW---ERRTRFR 130
Query: 153 YDVVVN 158
DV++
Sbjct: 131 NDVLLQ 136
>gi|196013285|ref|XP_002116504.1| hypothetical protein TRIADDRAFT_60488 [Trichoplax adhaerens]
gi|190581095|gb|EDV21174.1| hypothetical protein TRIADDRAFT_60488 [Trichoplax adhaerens]
Length = 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 33/156 (21%)
Query: 5 LQNTHVKLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDG 63
L + H+KLL D+ L D + ++ + EI+G + S K +K + +DDG
Sbjct: 15 LFSAHIKLLIRDVDHLLAVKDFTNVYLYHDHIIYKVEIMGDVVSV-VKKNKLDEIVLDDG 73
Query: 64 TGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIAS-YRGD- 121
TG + C LW +D +R K+G + + GR+ YR
Sbjct: 74 TGRISCTLW-----------KDRDKIR-----------DCKLGDLVTIMGRVTEGYRDSG 111
Query: 122 ----VQITVSDVVIEKDPNMEVLHWLDCLRLARKRY 153
VQ V+D + PN+E W D ++L ++ Y
Sbjct: 112 KRIVVQRLVNDTL---RPNIEYKRWKDIIQLHQRVY 144
>gi|409095625|ref|ZP_11215649.1| replication factor A complex, RPA32 subunit [Thermococcus zilligii
AN1]
Length = 268
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 24/120 (20%)
Query: 30 SRSGKLLSRAEIVGTITSRDH--KPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPS 87
++ + + R +IV T+ + + KF +DDGTG + W L RD
Sbjct: 34 TKDARKVYRVKIVATVVREPFISEDETYGKFQLDDGTGTI----WA-------LAFRDD- 81
Query: 88 TVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
T F ++ G + +V G++A +R D QI V V DPNM +LH + L+
Sbjct: 82 ---------TRFVKLVRKGDLVQVIGKVAEWRDDKQILVEGVA-RVDPNMMILHRFETLK 131
>gi|240103819|ref|YP_002960128.1| Replication factor A complex, RPA32 subunit [Thermococcus
gammatolerans EJ3]
gi|239911373|gb|ACS34264.1| Replication factor A complex, RPA32 subunit [Thermococcus
gammatolerans EJ3]
Length = 268
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 55 FIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGR 114
+ KF +DDGTG + W+ L RD T F +K G + +V G+
Sbjct: 61 YGKFQIDDGTGTI----WV-------LAFRD----------NTRFVKLVKKGDLVQVIGK 99
Query: 115 IASYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
+A +R D QI V V + PNM VLH + L+
Sbjct: 100 VAEWRDDKQILVEGVA-KVHPNMMVLHRFETLK 131
>gi|389747631|gb|EIM88809.1| hypothetical protein STEHIDRAFT_138004 [Stereum hirsutum FP-91666
SS1]
Length = 744
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 26/124 (20%)
Query: 58 FTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLI------------------------- 92
+ VDDGTG + C++ N P++D +
Sbjct: 139 YIVDDGTGIINCII-QNPEQPPQSPKKDGYRTKRKRTSSEGQGQSRSPGPDDEFTMPYSK 197
Query: 93 AGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKR 152
AG A A+++ G VAR+ G + S++G +I + ++ N E+ HW L L ++
Sbjct: 198 AGDANAENAELERGYVARITGIVRSWKGSKEIHIDEMERCTSVNDELEHWQRVLTLHQEH 257
Query: 153 YDVV 156
YD+
Sbjct: 258 YDLT 261
>gi|388503518|gb|AFK39825.1| unknown [Lotus japonicus]
Length = 274
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 25 DPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRR 84
D + F +G L+ +VG + + K ++ + F +DDGTG + C W+N
Sbjct: 60 DKSNFVINGVGLTNVTLVGMVFEKVEKNTE-VNFVLDDGTGRIKCRRWVNETYD------ 112
Query: 85 DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
T +I+ G+ R+ G + S++G Q+ V + + H++D
Sbjct: 113 ------------TKEMDQIQDGMYVRLYGHLKSFQGVRQLVAFSVRPVTNFDEIPFHFID 160
Query: 145 CLR 147
C+
Sbjct: 161 CIH 163
>gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa subunit, putative [Ricinus communis]
gi|223532593|gb|EEF34379.1| Replication protein A 30 kDa subunit, putative [Ricinus communis]
Length = 242
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 41 IVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFA 100
+VG + + K + + FTVDDGTG + C W+N D S +
Sbjct: 72 VVGMVFDKAQKVTD-VNFTVDDGTGRIGCKRWVNE-------NFDSSEMET--------- 114
Query: 101 AKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCL 146
I+ G+ RV G + S++G Q+ V + + H++DC+
Sbjct: 115 --IQDGMYVRVSGHLRSFQGVRQLGAFSVRPVMNFDEVTFHFIDCI 158
>gi|226483331|emb|CAX73966.1| Nucleic acid-binding, OB-fold,domain-containing protein
[Schistosoma japonicum]
Length = 409
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 25/143 (17%)
Query: 5 LQNTHVKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
L N H +LL L + F + + ++VG + S ++ KF +DDGT
Sbjct: 34 LANEHYQLLLGQLSEIKLVGSHGPFRFGPRWILFIDVVGAVRSI-YEREKFFIVELDDGT 92
Query: 65 GCVPCVLW---------------------LNHLTSLYLPRRDPSTVRLIAGVATDFAAKI 103
GC+ C +W N+L L S + I+ A ++ +
Sbjct: 93 GCITCTIWRPDYSNNICALTTKTNSSDFEQNYLCDQLLKLSYKS--QPISPSAKQ-SSNL 149
Query: 104 KIGLVARVRGRIASYRGDVQITV 126
IG + +RGR+ +RG +++
Sbjct: 150 HIGQILHLRGRLNCFRGKLKLNA 172
>gi|317147668|ref|XP_001821755.2| OB-fold nucleic acid binding domain protein [Aspergillus oryzae
RIB40]
Length = 259
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 25 DPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRR 84
D +TF + +VG I +R P+ I TVDD +G + V+ L P
Sbjct: 45 DQSTFFYMNHPIRFVSLVGIIVARSEYPTLTI-LTVDDSSGAIIDVIVLK------APIT 97
Query: 85 DPSTVRLIAGVATDFAAKIKI---------GLVARVRGRIASYRGDVQITVSDVVIEKDP 135
D + + A AA K G+V +V+G ++++RG +Q+ + V + +D
Sbjct: 98 DDNGDQPSAYATKHVAATNKTTVDTNPLVPGVVVQVKGTLSTFRGTMQVQLERVAVVQDT 157
Query: 136 NMEVLHWLDCLRLARKRYDVVV 157
N E + +LD R RY V V
Sbjct: 158 NAE-MRFLD----QRSRYLVEV 174
>gi|356546205|ref|XP_003541521.1| PREDICTED: replication factor A protein 2-like [Glycine max]
Length = 277
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 56 IKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRI 115
+ F +DDGTG + C WL+ V T+ A I G+ AR+ G++
Sbjct: 90 VTFVLDDGTGRIECNKWLH------------------EAVDTNEAEAILEGMYARLHGQL 131
Query: 116 ASYRGDVQITVSDVVIEKDPNMEVLHWLDCL 146
++G + V D N H+ DC+
Sbjct: 132 KHFQGKRTLNVFSFRPVTDFNEIASHFTDCI 162
>gi|378726363|gb|EHY52822.1| replication factor A2 [Exophiala dermatitidis NIH/UT8656]
Length = 284
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 22 PTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYL 81
P PD A F+ G+ L + VG I S + +P+ I +T+DDGTG W++ ++ +
Sbjct: 60 PHPD-ADFTVDGEALGQVTFVGQIRSINTQPTN-ITYTIDDGTGIAEVKQWIDSDAAMNM 117
>gi|409048614|gb|EKM58092.1| hypothetical protein PHACADRAFT_171327 [Phanerochaete carnosa
HHB-10118-sp]
Length = 655
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 58 FTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTV--------RLIAGVATDFAAKIK----I 105
+++DDGTG V C L N + PR+ S AG + + A K +
Sbjct: 115 YSLDDGTGMVECNLRHNLVQPPASPRKSASHALSKYQPPKESAAGSSKNSAEPPKPVAAV 174
Query: 106 GLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWL 143
G + RV GR+ + + + + + P E LHWL
Sbjct: 175 GDIIRVVGRVLNRHWTRIVNAERIAVCRSPTEEPLHWL 212
>gi|258565505|ref|XP_002583497.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907198|gb|EEP81599.1| predicted protein [Uncinocarpus reesii 1704]
Length = 241
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 41 IVGTITSRDHKPSKFIKFTVDDGTGC---VPCVLWLNHLTSLYLPRR-----DPSTVRLI 92
+ G + SRD K + I +DD TG V C + P R DPS L
Sbjct: 35 LAGIVVSRDEKVRRTI-LVLDDSTGHTIEVVCSKYTPPPDQPLPPSRNGNGPDPSITHLT 93
Query: 93 AGVATDF-AAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARK 151
+ + ++ G+VA+++G I + G +Q+ + V+ D N EV W + R
Sbjct: 94 SATRVPLDISPLRPGVVAKLKGTITRFHGTLQLHLERYVLLHDTNAEVQFWQE-----RT 148
Query: 152 RYDVVV 157
RY V V
Sbjct: 149 RYFVQV 154
>gi|115447461|ref|NP_001047510.1| Os02g0633400 [Oryza sativa Japonica Group]
gi|49388178|dbj|BAD25304.1| putative replication protein A2 [Oryza sativa Japonica Group]
gi|113537041|dbj|BAF09424.1| Os02g0633400 [Oryza sativa Japonica Group]
gi|215707148|dbj|BAG93608.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 298
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 23/140 (16%)
Query: 25 DPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRR 84
D + F+ +G +S +VG + ++ + + + FT+DDGTG VP W N T
Sbjct: 75 DKSNFAVNGMEVSTVRLVGRMLNKLDRVTD-VSFTLDDGTGRVPVNRWENDSTD------ 127
Query: 85 DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
T A I+ G V G + ++G Q+ V + N H+L
Sbjct: 128 ------------TKEMADIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLH 175
Query: 145 C----LRLARKRYDVVVNKS 160
C L L R + V N +
Sbjct: 176 CVHVHLELTRPKSQVNANTA 195
>gi|317027446|ref|XP_001399329.2| OB-fold nucleic acid binding domain protein [Aspergillus niger CBS
513.88]
Length = 254
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 8 THVKLLAFDLLSLT---PTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
T VK+ A D+L L PDP + + ++G ITSR P+ I T+DD +
Sbjct: 26 TWVKMAAVDVLRLKRRPEFPDPKIYFYKNHPIQYISLLGLITSRTEFPTVTI-LTLDDSS 84
Query: 65 G---------CVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRI 115
G P + L + + P + S +A + +A G A ++G I
Sbjct: 85 GVTLDVVVQKATPNSTPSSTLPTSFTPTQHISPTTSLALDISPYAP----GTFAHLKGTI 140
Query: 116 ASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVVV 157
+++RG Q+ + V +D N E + +LD R R+ V V
Sbjct: 141 STFRGVNQLQLERVFPVRDTNAE-MRFLD----QRSRFLVEV 177
>gi|226468308|emb|CAX69831.1| Nucleic acid-binding, OB-fold,domain-containing protein
[Schistosoma japonicum]
Length = 242
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 5 LQNTHVKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
L N H +LL L + F + + ++VG + S ++ KF +DDGT
Sbjct: 34 LANEHYQLLLGQLSEIKLVGSHGPFRFGPRWILFIDVVGAVRSI-YEREKFFIVELDDGT 92
Query: 65 GCVPCVLW 72
GC+ C +W
Sbjct: 93 GCITCTIW 100
>gi|359485014|ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
Length = 275
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 10 VKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
VK ++ LS + D + F G ++ +VG + ++ + + + F +DDGTG + C
Sbjct: 47 VKQISEAFLS---SDDKSNFLIDGVEVNNVTLVGMVFNKAERVTD-VGFMLDDGTGRIDC 102
Query: 70 VLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDV 129
W+N V T I G+ RV G + ++G + V +
Sbjct: 103 NRWVNE------------------AVDTKEMEGILDGMYVRVHGHLKGFQGKRHLNVFSI 144
Query: 130 VIEKDPNMEVLHWLDCL 146
D N H+++C+
Sbjct: 145 RPVTDFNEIASHFIECI 161
>gi|297735401|emb|CBI17841.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 10 VKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
VK ++ LS + D + F G ++ +VG + ++ + + + F +DDGTG + C
Sbjct: 47 VKQISEAFLS---SDDKSNFLIDGVEVNNVTLVGMVFNKAERVTD-VGFMLDDGTGRIDC 102
Query: 70 VLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDV 129
W+N V T I G+ RV G + ++G + V +
Sbjct: 103 NRWVNE------------------AVDTKEMEGILDGMYVRVHGHLKGFQGKRHLNVFSI 144
Query: 130 VIEKDPNMEVLHWLDCL 146
D N H+++C+
Sbjct: 145 RPVTDFNEIASHFIECI 161
>gi|358394946|gb|EHK44339.1| hypothetical protein TRIATDRAFT_8012, partial [Trichoderma
atroviride IMI 206040]
Length = 207
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 98 DFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDV 155
D A I +G V V+G +++YR + QI + +VI K EV W + RK DV
Sbjct: 121 DPYADIDVGAVVDVKGGLSTYRDERQINIEKMVIVKSTTQEVALWEKRTKFCRKVLDV 178
>gi|15679576|ref|NP_276693.1| hypothetical protein MTH1581 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622704|gb|AAB86054.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 137
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 19 SLTPTPDPATFSR--SGKLLSRAEIVGTITS-RDHKPSKFIKFTVDDGTGCVPCVLWLNH 75
S T TPDP ++ G + + + GT+ R+ + S I ++DGTG + V++
Sbjct: 29 SATLTPDPIKIAQIDRGMIDRKVTVEGTVADVRESEHSGIIFLKINDGTGTITAVIF--E 86
Query: 76 LTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSD 128
T+ + R P+ + L G+ +V GR+ YRG +++ V +
Sbjct: 87 STAETIKRNGPAPILLK-------------GMRVQVTGRVKEYRGLLEVAVEE 126
>gi|357117453|ref|XP_003560482.1| PREDICTED: uncharacterized protein LOC100837028 [Brachypodium
distachyon]
Length = 431
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 25/123 (20%)
Query: 29 FSRSGKLLSRAEIVG---TITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRD 85
FS G S ++G I SR+ + FT+DDGTG + V W+ + L RD
Sbjct: 72 FSIDGVETSNVRVLGRVLNIVSRETD----VSFTLDDGTGKIALVRWI----TDQLDARD 123
Query: 86 PSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDC 145
A I+ G+ RV + ++ Q + + + N VLH+++C
Sbjct: 124 --------------TAYIRDGVYVRVHANVTGFQAKQQAFIRSIRPVTNFNEVVLHYIEC 169
Query: 146 LRL 148
+ +
Sbjct: 170 MHV 172
>gi|339444860|ref|YP_004710864.1| hypothetical protein EGYY_13110 [Eggerthella sp. YY7918]
gi|338904612|dbj|BAK44463.1| hypothetical protein EGYY_13110 [Eggerthella sp. YY7918]
Length = 457
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 41 IVGTITSRDHKPS-KFIKFTVDDGTGCVPCVLWLNHLTSLYLP 82
+VG ++ +KP K + FTV D +PC++WLN + +P
Sbjct: 55 LVGEVSEVSNKPGYKAVYFTVKDQKAALPCMMWLNRYHAAGVP 97
>gi|387593702|gb|EIJ88726.1| hypothetical protein NEQG_01416 [Nematocida parisii ERTm3]
gi|387597362|gb|EIJ94982.1| hypothetical protein NEPG_00507 [Nematocida parisii ERTm1]
Length = 232
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 29/135 (21%)
Query: 9 HVKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVP 68
HV + FD S T G+ +S E++G IT + KFT+ DGTG +
Sbjct: 22 HVNQVEFDEESKQNTQ------FRGQGVSLVELMGWITFENDSVHGGKKFTLSDGTGSIS 75
Query: 69 CVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSD 128
C+LW +D S IK G R+ G ++ + ++ I +
Sbjct: 76 CLLW---------DEKDSS--------------HIKKGAYIRIVGSLSKHEQNISINCTI 112
Query: 129 VVIEKDPNMEVLHWL 143
D N + H L
Sbjct: 113 TTPITDGNSVMYHLL 127
>gi|408392795|gb|EKJ72115.1| hypothetical protein FPSE_07740 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 41 IVGTITSRDHKPSKFIKFTVDDGTG-CVPCVLWLNHLTSLYLPRR---DPSTVRLIAG-- 94
IVG + + D + + +T+DD +G C+ C + + L+ D ++ + A
Sbjct: 59 IVGLVVAIDEFTGRRV-YTIDDSSGACIECTVKMPMLSGGTGNTTTLGDAASKKADANPP 117
Query: 95 VATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRL 148
+ TD I +G V ++G ++S+R + Q+T+ +++ + EV W +R
Sbjct: 118 LPTDPFPTIDVGCVVDIKGGLSSFRDERQLTIEKMLVVRSTQQEVALWEKRVRF 171
>gi|357138371|ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 18 LSLTPTP-DPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHL 76
+++ P P P+ F +G +S + + +I + +K T+ DG + C W L
Sbjct: 254 IAVPPVPIRPSRFV-AGTTMSNEDSITSILRNIVNANSHLKLTIQDGQVPMKCFTWWEQL 312
Query: 77 TSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSD----VVIE 132
+ + I A+ GL+ R++G+ +RG++ ++ VI
Sbjct: 313 QD--------NVIEYINSDASSLQDSKDCGLIQRLKGKTGRFRGNLSGKRTEHTGRTVIS 364
Query: 133 KDPNMEV 139
DPN+ +
Sbjct: 365 PDPNLRI 371
>gi|76153709|gb|AAX25321.2| SJCHGC08332 protein [Schistosoma japonicum]
Length = 157
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 5 LQNTHVKLLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
L N H +LL L + F + + ++VG + S ++ KF +DDGT
Sbjct: 48 LANEHYQLLLGQLSEIKLVGSHGPFRFGPRWILFIDVVGAVRSI-YEREKFFIVELDDGT 106
Query: 65 GCVPCVLW 72
GC+ C +W
Sbjct: 107 GCITCTIW 114
>gi|356564842|ref|XP_003550656.1| PREDICTED: replication factor A protein 2-like [Glycine max]
Length = 178
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 56 IKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRI 115
+ F +DDGTG + C WL+ V T+ A I G+ AR+ G++
Sbjct: 36 VTFVLDDGTGRIECSKWLH------------------EAVDTNEAEAILDGMYARLHGQL 77
Query: 116 ASYRGDVQITVSDVVIEKDPNMEVLHWLDCL 146
++ +TV D N H+ DC+
Sbjct: 78 KHFQRKRTLTVFSFRPVTDFNEIASHFSDCI 108
>gi|46128757|ref|XP_388932.1| hypothetical protein FG08756.1 [Gibberella zeae PH-1]
Length = 260
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 41 IVGTITSRDHKPSKFIKFTVDDGTG-CVPCVLWLNHLTS----------LYLPRRDPSTV 89
IVG + + D + + +T+DD +G C+ C + + L+ + DP+
Sbjct: 59 IVGLVVAIDEFTGRRV-YTIDDSSGACIECTVKMPMLSGGVGSTTASGDAASKKADPNPP 117
Query: 90 RLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRL 148
+ TD I +G V ++G I+S+R + Q+T+ +++ + EV W +R
Sbjct: 118 -----LPTDPFPTIDVGCVVDIKGGISSFRDERQLTIEKMLVVRSTQQEVALWEKRVRF 171
>gi|350634320|gb|EHA22682.1| hypothetical protein ASPNIDRAFT_126586 [Aspergillus niger ATCC
1015]
Length = 232
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 8 THVKLLAFDLLSLT---PTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGT 64
T VK+ A D+L L PDP + + ++G ITSR P+ I T+DD +
Sbjct: 26 TWVKMAAVDVLRLKRRPEFPDPKIYFYKNHPIQYISLLGLITSRTEFPTVTI-LTLDDSS 84
Query: 65 GCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAK----------IKIGLVARVRGR 114
G L+ + P PS+ + T + G A ++G
Sbjct: 85 GVT-----LDVVVQKATPNSTPSSTLPTSFTPTQHISPTTSLPLDISPYAPGTFAHLKGT 139
Query: 115 IASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLARKRYDVVV 157
I+++RG Q+ + V +D N E + +LD R R+ V V
Sbjct: 140 ISTFRGVNQLQLERVFPVRDTNAE-MRFLD----QRSRFLVEV 177
>gi|359417773|ref|ZP_09209842.1| hypothetical protein HRED_00653 [Candidatus Haloredivivus sp. G17]
gi|358031866|gb|EHK00701.1| hypothetical protein HRED_00653 [Candidatus Haloredivivus sp. G17]
Length = 248
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 27/122 (22%)
Query: 32 SGKLLSRAEIVGTITSRD-HKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVR 90
SG+ +SRA VGT+ R + + T+DDG + S +
Sbjct: 37 SGRRISRARAVGTVVDRFVNDDETYGSLTLDDGNDTTQIKFF--------------SELE 82
Query: 91 LIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCLRLAR 150
L+ DF +IG V V G++ Y+G + + +V+ E P E+LH LRLA+
Sbjct: 83 LME----DF----EIGQVIEVVGKVREYQGQIYLD-GEVLREVKPEKELLHR---LRLAK 130
Query: 151 KR 152
+
Sbjct: 131 RE 132
>gi|357479633|ref|XP_003610102.1| Replication factor A protein [Medicago truncatula]
gi|355511157|gb|AES92299.1| Replication factor A protein [Medicago truncatula]
Length = 278
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 41 IVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFA 100
+VG + ++ + ++F KF +DDGTG + C WL +P+ + +
Sbjct: 74 LVGRVCNKSGQITEF-KFVLDDGTGTIECTKWL----------HEPADAMAVESILN--- 119
Query: 101 AKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCL 146
G+ R+ G++ ++G +++ + D N H+++C+
Sbjct: 120 -----GMYVRLYGQLKGFQGKT-LSIFSLRPVTDFNEIASHFIECI 159
>gi|388516063|gb|AFK46093.1| unknown [Medicago truncatula]
Length = 278
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 41 IVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFA 100
+VG + ++ + ++F KF +DDGTG + C WL+ +P+ + +
Sbjct: 74 LVGRVCNKSGQITEF-KFVLDDGTGTIECTKWLH----------EPADAMAVESILN--- 119
Query: 101 AKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLDCL 146
G+ R+ G++ ++G +++ + D N H+++C+
Sbjct: 120 -----GMYVRLYGQLKGFQGKT-LSIFSLRPVTDFNEIASHFIECI 159
>gi|449457165|ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
sativus]
gi|449500253|ref|XP_004161048.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
sativus]
Length = 277
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 25 DPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRR 84
D + F G ++ ++VG + +R + + + F +DDGTG + C W+N
Sbjct: 58 DKSNFVIDGVDVNNVKLVGMVRNRAGRITD-VTFALDDGTGRIDCSKWVNEAA------- 109
Query: 85 DPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
D + V I G+ RV G + S++G + V + D N H+++
Sbjct: 110 DSNEVEGILD-----------GMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIE 158
Query: 145 CL 146
+
Sbjct: 159 SI 160
>gi|212224693|ref|YP_002307929.1| hypothetical protein TON_1542 [Thermococcus onnurineus NA1]
gi|212009650|gb|ACJ17032.1| hypothetical protein TON_1542 [Thermococcus onnurineus NA1]
Length = 991
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 12 LLAFDLLSLTPTPDPATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVL 71
+++ ++ P+P+ T S ++ R IV ++ S F K T+DDG+G +
Sbjct: 890 VVSLKVIRAEPSPEVKTGDVSADIMGRTVIVSGTIVDLYEGSTFFKLTIDDGSGEL---- 945
Query: 72 WLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQIT--VSDV 129
+++P+ AG T G V R+ G + Y+G +++ +SD
Sbjct: 946 ------VIFIPKS-------AAGDKT-----FSKGQVVRIAGYVTEYKGTIEVVPYMSDA 987
Query: 130 VI 131
+I
Sbjct: 988 II 989
>gi|74147699|dbj|BAE38722.1| unnamed protein product [Mus musculus]
Length = 190
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 11 KLLAFDLLSLTPTPD-PATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPC 69
KL D+L + + P T+ +G + R +I+G + S + F + VDD TG + C
Sbjct: 35 KLYIKDILEMKESQQVPGTYFYNGHPIRRVDIMGAVISVKER-ETFYSYGVDDATGVINC 93
Query: 70 VLW 72
V W
Sbjct: 94 VCW 96
>gi|57641894|ref|YP_184372.1| replication factor A complex, RPA32 subunit [Thermococcus
kodakarensis KOD1]
gi|57160218|dbj|BAD86148.1| replication factor A complex, RPA32 subunit [Thermococcus
kodakarensis KOD1]
Length = 268
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 22/91 (24%)
Query: 57 KFTVDDGTGCVPCVLWLNHLTSLYLPRRDPSTVRLIAGVATDFAAKIKIGLVARVRGRIA 116
KF +DDGTG + W+ R D +RL +K G + ++ G++A
Sbjct: 63 KFQIDDGTGTI----WVLGF------RDDTRFIRL-----------VKKGDLVQIIGKVA 101
Query: 117 SYRGDVQITVSDVVIEKDPNMEVLHWLDCLR 147
+R D QI V V PN +LH + L+
Sbjct: 102 EWRDDKQILVEGVA-RVSPNFWILHRFETLK 131
>gi|342884398|gb|EGU84613.1| hypothetical protein FOXB_04801 [Fusarium oxysporum Fo5176]
Length = 583
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 41 IVGTITSRDHKPSKFIKFTVDDGTG-CVPCVLWLNHLTSLYLPRRDPSTVRLIAGVAT-- 97
IVG + + D S+ + +T+DD +G C+ C++ +P S R G A
Sbjct: 382 IVGLVVAIDEFASRRV-YTIDDSSGACIECII--------SIPISGESDSRATTGDAAPK 432
Query: 98 ----------DFAAKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHW 142
D I +G + ++G ++++R + Q+T+ ++ + EV W
Sbjct: 433 KADIDPPQNPDPFPNIDVGCIVDIKGGLSTFRDERQLTIEKMIKVRSTAQEVTLW 487
>gi|294885959|ref|XP_002771487.1| Replication protein A 32 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239875191|gb|EER03303.1| Replication protein A 32 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 319
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Query: 27 ATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDP 86
A F GK EIVG + + +++T+DDGTGCV ++
Sbjct: 85 ANFKFHGKEAFMIEIVGAVIDVQRRADNGMEYTIDDGTGCVRATRFVE------------ 132
Query: 87 STVRLIAGVATDFAAKIKIGLVARVRGRIASYRGDVQITV 126
S++ + D I++G V GR+ + + IT
Sbjct: 133 SSLSAMTDAPVD---DIRVGQYVSVVGRLRRFSSENNITA 169
>gi|357138267|ref|XP_003570718.1| PREDICTED: replication protein A 32 kDa subunit-like [Brachypodium
distachyon]
Length = 278
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 23/124 (18%)
Query: 27 ATFSRSGKLLSRAEIVGTITSRDHKPSKFIKFTVDDGTGCVPCVLWLNHLTSLYLPRRDP 86
A F G ++ +VG + + + + + FT+DDGTG + + W+N
Sbjct: 58 APFVVDGVEIANIRLVGMVNGKAERATD-VSFTLDDGTGRLDFIRWVND----------- 105
Query: 87 STVRLIAGVATDFA--AKIKIGLVARVRGRIASYRGDVQITVSDVVIEKDPNMEVLHWLD 144
ATD A A I+ G+ V G + + T V D N LH++
Sbjct: 106 ---------ATDSAETAAIQNGMYVAVIGTLKGLQDKKHATAFSVRPITDYNEVTLHFIQ 156
Query: 145 CLRL 148
C+R+
Sbjct: 157 CVRI 160
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,475,615,792
Number of Sequences: 23463169
Number of extensions: 90885666
Number of successful extensions: 192993
Number of sequences better than 100.0: 165
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 192823
Number of HSP's gapped (non-prelim): 172
length of query: 160
length of database: 8,064,228,071
effective HSP length: 122
effective length of query: 38
effective length of database: 9,496,688,749
effective search space: 360874172462
effective search space used: 360874172462
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)