Your job contains 1 sequence.
>043478
MSHIQLKELQEGNHMKLSSLDLGIDDDAYYKKTLFAIFGRSNQLNDNLSFLSVEHKSSFE
NLFSVPLMYGGCAHRSPKEICRKYCPLTMESENFCEEHVSLDKRTKNEKFMLLRSVVPYI
SEVDKASILNDTIKYLKRLKARVEE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043478
(145 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 151 2.2e-12 2
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 167 1.6e-11 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 132 1.7e-11 2
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 129 3.7e-09 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 130 7.2e-08 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 130 1.0e-07 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 128 2.4e-07 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 126 3.4e-07 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 117 1.3e-06 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 119 1.6e-06 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 116 5.2e-06 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 112 8.1e-06 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 110 1.1e-05 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 109 1.3e-05 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 112 1.3e-05 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 111 1.7e-05 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 109 2.2e-05 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 106 2.5e-05 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 108 3.0e-05 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 108 3.5e-05 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 108 4.4e-05 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 105 9.5e-05 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 104 0.00016 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 104 0.00018 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 100 0.00019 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 103 0.00021 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 103 0.00029 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 99 0.00091 1
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 151 (58.2 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 29/44 (65%), Positives = 39/44 (88%)
Query: 102 DKRTKNEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
D+R +NEKF +LR++VP ++EVDK SILN+TIKYL+ L+ARVEE
Sbjct: 345 DRRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEE 388
Score = 47 (21.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 20 LDLGI-DDDAYYKKTLFAIFGRS 41
L LGI D+D +YK+T+ + S
Sbjct: 243 LPLGISDEDLHYKRTISTVLNYS 265
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 167 (63.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 56/159 (35%), Positives = 88/159 (55%)
Query: 2 SHIQ-LKELQE-GNHMKLSSLDLGIDDDAYYKKTLFAIFGRSNQLNDNLSFLSVEHKSSF 59
S IQ L ++QE NH+ + DDD +Y+ + IF ++QL F + + +SSF
Sbjct: 307 SRIQRLGQIQEQSNHVNM-------DDDVHYQGVISTIFKTTHQLILGPQFQNFDKRSSF 359
Query: 60 ---ENLFSVPLMYGGCAHRSPKEICRKYCPLTMESENFC----EE---HVSLDKRTK--- 106
+ SV + G + + K+I + PL + E EE H +K+ +
Sbjct: 360 TRWKRSSSVKTL-GEKSQKMIKKILFEV-PLMNKKEELLPDTPEETGNHALSEKKRREKL 417
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
NE+FM LRS++P IS++DK SIL+DTI+YL+ L+ RV+E
Sbjct: 418 NERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQE 456
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 132 (51.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 90 ESENFCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
E+ + H L+K+ + NE+FM LR ++P I+++DK SIL+DTI+YL+ L+ RV+E
Sbjct: 434 EARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQE 492
Score = 59 (25.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 2 SHIQ-LKELQEGN-HMKLSSLDLGIDDDAYYKKTLFAIFGRSNQLNDNLSFLSVEHKSSF 59
S +Q L ++QE ++K S D +DD +Y+ + IF ++QL F + + +SSF
Sbjct: 330 SRVQRLGQIQEQQRNVKTLSFDPR-NDDVHYQSVISTIFKTNHQLILGPQFRNCDKQSSF 388
Score = 34 (17.0 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 40 RSNQLNDNLSFLSVEHKSS 58
RS QL++ LSV SS
Sbjct: 74 RSEQLSELYESLSVAESSS 92
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 129 (50.5 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 87 LTMESENFCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
LT ES + HV ++R + NE F++L+S+VP I +VDKASIL +TI YLK L+ RV
Sbjct: 384 LTQESG--IKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRV 441
Query: 144 EE 145
+E
Sbjct: 442 KE 443
Score = 38 (18.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 41 SNQLNDNLSFLSVEHKSSFENLFSVPLMYGGCAHRSPKEI 80
SN + L V+ L+ L+ G C HR+ + I
Sbjct: 65 SNSADLTAGQLVVQRSEQLRELY-YSLLSGECDHRARRPI 103
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 130 (50.8 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 96 EEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+ HV ++R + NE F++L+S+VP I +VDKASIL++TI YLK L+ RV+E
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQE 239
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 130 (50.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 87 LTMESENFCEEHVSLDKRTKN---EKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
+T + + + HV ++R + E F++L+SVVP I +VDKASIL +TI YLK L+ RV
Sbjct: 234 MTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRV 293
Query: 144 EE 145
EE
Sbjct: 294 EE 295
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 128 (50.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 44/135 (32%), Positives = 68/135 (50%)
Query: 17 LSSLDLGIDDDAYYKKTLFAIFGRSNQLNDNLSFLSVEHKS-SFENLFSVPLMYG-GCA- 73
L ++++ +D++ Y KT G S + N S + + KS S V L+ G G
Sbjct: 315 LENVNMVVDNNNY--KTQIEFAGSSVAASSNPSTNTQQEKSESCTEKRPVSLLAGAGIVS 372
Query: 74 ---HRSPKEICRKYCPLTMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASIL 129
+ P++ RK P E +R K N++F LRSVVP IS++DKAS+L
Sbjct: 373 VVDEKRPRKRGRK--PANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLL 430
Query: 130 NDTIKYLKRLKARVE 144
D I Y+K L+ +V+
Sbjct: 431 GDAISYIKELQEKVK 445
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 126 (49.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
HV ++R + NEKF+ LRS+VP+++++DK SIL DTI Y+ L+ RV E
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHE 414
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 117 (46.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 102 DKRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
D+R K NEK LRSVVP I+++DKASI+ D I+Y++RL+A ++
Sbjct: 100 DRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQ 144
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 119 (46.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 24 IDDDAYYKKTLFAIFGRSNQLNDNLSFLSVEHKSSFENLFSVP-LMYGGCAHRSPKEICR 82
+D AY + F + R+N ++V + E+ + + GG A S +
Sbjct: 308 VDGVAYSHASCFVSWKRANPAE---KVVAVPMTAGIESQKLLKKAVGGGTAWMSNIDDRG 364
Query: 83 KYCPLTMESENFCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRL 139
T N + HV ++R + NE F++L+S++P + +VDKASIL +TI YLK L
Sbjct: 365 SVAITTTPGSNI-KSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVL 423
Query: 140 KARVEE 145
+ RV+E
Sbjct: 424 EKRVKE 429
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 116 (45.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 40/124 (32%), Positives = 62/124 (50%)
Query: 25 DDDAYYKKTLFAIFG-RSNQLNDNLSFLSVEHKSSFENLFS---VPLMYGGCAHRSPKEI 80
D +Y +T F RS LN++ LS K++ E+ S ++ + PK+
Sbjct: 381 DPSSYSGQTQFENKRKRSMVLNED-KVLSFGDKTAGESDHSDLEASVVKEVAVEKRPKKR 439
Query: 81 CRKYCPLTMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYLKRL 139
RK P E +R K N++F LR+VVP +S++DKAS+L D I Y+ L
Sbjct: 440 GRK--PANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL 497
Query: 140 KARV 143
K++V
Sbjct: 498 KSKV 501
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 112 (44.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 19/51 (37%), Positives = 37/51 (72%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
HV +K+ + N +F LR++VP +S +DKAS+L+D + Y++ LK+++++
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDD 300
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 110 (43.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 70 GGCAHRSPKEICRKYCPLTMESENFCEEHVSLDKRTKNEKFMLLRSVVPYISEVDKASIL 129
GG A CR P S+N E ++ N++ +LRSVVP IS++D+ SIL
Sbjct: 175 GGAAASVRPRSCRPPQP-GAPSKNLMAERRR--RKRLNDRLSMLRSVVPRISKMDRTSIL 231
Query: 130 NDTIKYLKRLKARVE 144
DTI Y+K L R++
Sbjct: 232 GDTIGYVKELMDRIK 246
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 109 (43.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/107 (29%), Positives = 54/107 (50%)
Query: 39 GRSNQLNDNLSFLSVEHKSSFENLFSVPLMYGGCAHRSPKEICRKYCPLTMESENFCEEH 98
G+ N+ +S+ S +S FSV G C + K+ +K S+N E
Sbjct: 131 GQEENFNNPMSYPSPLMESDQSKSFSV----GYCGGETNKKKSKKL--EGQPSKNLMAER 184
Query: 99 VSLDKRTKNEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
++ N++ +LRS+VP IS++D+ SIL D I Y+K L ++ +
Sbjct: 185 RR--RKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINK 229
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 112 (44.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 75 RSPKEICRKYCPLTMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILNDTI 133
+ P++ RK P E +R K N++F LR+VVP +S++DKAS+L D I
Sbjct: 397 KKPRKRGRK--PANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAI 454
Query: 134 KYLKRLKARVEE 145
Y+ LK+++++
Sbjct: 455 SYINELKSKLQQ 466
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 75 RSPKEICRKYCPLTMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILNDTI 133
+ P++ RK P E +R K N++F LR+VVP +S++DKAS+L D I
Sbjct: 398 KKPRKRGRK--PANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAI 455
Query: 134 KYLKRLKARVEE 145
Y+ LK+++++
Sbjct: 456 SYISELKSKLQK 467
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 103 KRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+R K N++ +LRSVVP IS++D+ASIL D I YLK L R+ +
Sbjct: 315 RRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 358
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 106 (42.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 18/54 (33%), Positives = 39/54 (72%)
Query: 94 FCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
+ ++H+ ++R + N++F+ L +V+P + ++DKA+IL D +KY+K L+ +V+
Sbjct: 164 YVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVK 217
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 108 (43.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 103 KRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+R K N++ +LRSVVP IS++D+ASIL D I+YLK L ++ +
Sbjct: 344 RRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKIND 387
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
HV +++ + N++F LRSVVP IS++DKAS+L D + Y+ L A+++
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLK 483
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 108 (43.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 73 AHRSPKEICRKYCPLTMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILND 131
A + P++ RK P E +R K N++F LR+VVP +S++DKAS+L D
Sbjct: 504 AEKRPRKRGRK--PANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGD 561
Query: 132 TIKYLKRLKARV 143
I Y+ L+ ++
Sbjct: 562 AISYINELRGKL 573
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 105 (42.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 103 KRTKNEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
++ N++ +LRS+VP IS++D+ SIL DTI Y+K L R++
Sbjct: 191 RKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIK 232
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
Identities = 29/103 (28%), Positives = 55/103 (53%)
Query: 53 VEHKSS---FENLFSVPLMYGGCAHRSPKEICRKYC----PLTMESENFCEEHVSLDKRT 105
+EH+ S ++FS L H+ E RK P + N ++H+ +++
Sbjct: 102 MEHEYSPTYLNSIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQSN-AQDHIIAERKR 160
Query: 106 KN---EKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+ ++F+ L ++VP + ++DKAS+L D +K++K L+ RV E
Sbjct: 161 REKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGE 203
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 104 (41.7 bits), Expect = 0.00018, P = 0.00018
Identities = 16/55 (29%), Positives = 40/55 (72%)
Query: 94 FCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+ +EH+ +++ + N++F+ L +V+P + ++DKA+IL+D ++Y+K ++ ++ E
Sbjct: 189 YAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSE 243
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 100 (40.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 96 EEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+EHV +++ + NE+ + L +++P + + DKA++L D IK+LK+L+ RV++
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKK 183
Score = 33 (16.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 18 SSLDLGIDDDAYYK---KTLFAIFGRSN 42
S +DL ID D Y ++ F I G +N
Sbjct: 5 SFMDLMIDTDEYLIDDWESDFPICGETN 32
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 103 (41.3 bits), Expect = 0.00021, P = 0.00021
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 96 EEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
E H +KR + NEK L+S++P S+ DKAS+L+D I+YLK+L+ +V+
Sbjct: 35 EVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQ 86
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 103 (41.3 bits), Expect = 0.00029, P = 0.00029
Identities = 20/57 (35%), Positives = 41/57 (71%)
Query: 91 SENFCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
S+N +EH+ +++ + +++F+ L +VP + ++DKAS+L D IKY+K+L+ +V+
Sbjct: 177 SQN--QEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVK 231
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 99 (39.9 bits), Expect = 0.00091, P = 0.00091
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
HV +++ + N +F LR+ VP +S +DKAS+L D + Y+ L+ RVE
Sbjct: 95 HVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVE 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 145 145 0.00071 103 3 11 22 0.45 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 558 (59 KB)
Total size of DFA: 133 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.81u 0.17s 15.98t Elapsed: 00:00:01
Total cpu time: 15.81u 0.17s 15.98t Elapsed: 00:00:01
Start: Fri May 10 04:53:48 2013 End: Fri May 10 04:53:49 2013