BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043478
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W2F1|BH012_ARATH Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1
SV=1
Length = 526
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 20/146 (13%)
Query: 20 LDLGI-DDDAYYKKTLFAIFG----RSNQLNDNL-----SFLSVEHKSSFENLFSVPLMY 69
L LGI D+D +YK+T+ + RS + + N+ + ++ E SSF
Sbjct: 243 LPLGISDEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNIVTSEPGSSFLRWKQCEQQV 302
Query: 70 GGCAHRSPKE-ICRKY---CPLTMESENFCEEHVSL------DKRTKNEKFMLLRSVVPY 119
G + + + RK PL F ++ L D+R +NEKF +LR++VP
Sbjct: 303 SGFVQKKKSQNVLRKILHDVPLMHTKRMFPSQNSGLNQDDPSDRRKENEKFSVLRTMVPT 362
Query: 120 ISEVDKASILNDTIKYLKRLKARVEE 145
++EVDK SILN+TIKYL+ L+ARVEE
Sbjct: 363 VNEVDKESILNNTIKYLQELEARVEE 388
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 46/170 (27%)
Query: 2 SHIQ-LKELQE-GNHMKLSSLDLGIDDDAYYKKTLFAIFGRSNQLNDNLSFLSVEHKSSF 59
S IQ L ++QE NH+ + DDD +Y+ + IF ++QL F + + +SSF
Sbjct: 307 SRIQRLGQIQEQSNHVNM-------DDDVHYQGVISTIFKTTHQLILGPQFQNFDKRSSF 359
Query: 60 EN---------------------LFSVPLMYGGCAHRSPKEICRKYCPLTMESENFCEEH 98
LF VPLM + KE + P T E H
Sbjct: 360 TRWKRSSSVKTLGEKSQKMIKKILFEVPLM-------NKKE---ELLPDTPEETG---NH 406
Query: 99 VSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+K+ + NE+FM LRS++P IS++DK SIL+DTI+YL+ L+ RV+E
Sbjct: 407 ALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQE 456
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 18/139 (12%)
Query: 25 DDDAYYKKTLFAIFGRSNQLNDNLSFLSVEHKSSFENLFSVPLMYGGCAH-RSPKEICRK 83
+DD +Y+ + IF ++QL F + + +SSF G A +P + K
Sbjct: 354 NDDVHYQSVISTIFKTNHQLILGPQFRNCDKQSSFTRWKKSSSSSSGTATVTAPSQGMLK 413
Query: 84 YC-----------PLTMESENFCEE---HVSLDKRTK---NEKFMLLRSVVPYISEVDKA 126
L ++S +E H L+K+ + NE+FM LR ++P I+++DK
Sbjct: 414 KIIFDVPRVHQKEKLMLDSPEARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKV 473
Query: 127 SILNDTIKYLKRLKARVEE 145
SIL+DTI+YL+ L+ RV+E
Sbjct: 474 SILDDTIEYLQELERRVQE 492
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
HV ++R + NEKF+ LRS+VP+++++DK SIL DTI Y+ L+ RV E
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHE 414
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 96 EEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+ HV +++ + NE F++L+S++P I V+KASIL +TI YLK L+ RV+E
Sbjct: 417 KNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQE 469
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 96 EEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+ HV +++ + NE F++L+S++P I V+KASIL +TI YLK L+ RV+E
Sbjct: 415 KNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQE 467
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
HV +++ + N++F LRSVVP IS++DKAS+L D I Y+K L+ +V+
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVK 445
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 75 RSPKEICRKYCPLTMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILNDTI 133
+ PK+ RK P E +R K N++F LR+VVP +S++DKAS+L D I
Sbjct: 434 KRPKKRGRK--PANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 491
Query: 134 KYLKRLKARV 143
Y+ LK++V
Sbjct: 492 AYINELKSKV 501
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 103 KRTKNEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
++ N++ +LRSVVP IS++D+ASIL D I YLK L R+ +
Sbjct: 316 RKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 358
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
N++ +LRSVVP IS++D+ASIL D I YLK L R+ +
Sbjct: 280 NDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 318
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 75 RSPKEICRKYCPLTMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILNDTI 133
+ P++ RK P E +R K N++F LR+VVP +S++DKAS+L D I
Sbjct: 397 KKPRKRGRK--PANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAI 454
Query: 134 KYLKRLKARVEE 145
Y+ LK+++++
Sbjct: 455 SYINELKSKLQQ 466
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
HV +K+ + N +F LR++VP +S +DKAS+L+D + Y++ LK+++++
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDD 300
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
HV +++ + N++F LRSVVP IS++DKAS+L D + Y+ L A+++
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLK 483
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 75 RSPKEICRKYCPLTMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILNDTI 133
+ P++ RK P E +R K N++F LR+VVP +S++DKAS+L D I
Sbjct: 398 KKPRKRGRK--PANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAI 455
Query: 134 KYLKRLKARVEE 145
Y+ LK+++++
Sbjct: 456 SYISELKSKLQK 467
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 103 KRTKNEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
++ N++ LRS+VP I+++D+ASIL D I Y+K L+ +E
Sbjct: 323 RKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKE 365
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
N++ +LRS+VP IS++D+ SIL D I Y+K L ++
Sbjct: 191 NDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKI 227
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 98 HVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
HV +++ + N++F LR+VVP IS++DKAS+L D I Y+ ++ ++
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKI 369
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 61 NLFSVPLMYGGCAHRSPKEICRKYC----PLTMESENFCEEHVSLDKRTK---NEKFMLL 113
++FS L H+ E RK P + N ++H+ +++ + ++F+ L
Sbjct: 113 SIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQSN-AQDHIIAERKRREKLTQRFVAL 171
Query: 114 RSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
++VP + ++DKAS+L D +K++K L+ RV E
Sbjct: 172 SALVPGLKKMDKASVLGDALKHIKYLQERVGE 203
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
N++ LLRS+VP I+++D+ SIL D I Y+K L ++
Sbjct: 164 NDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKI 200
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 102 DKRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYLKRL 139
++R K N++ LRSVVP IS++DKAS++ D+I Y++ L
Sbjct: 61 NRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQEL 99
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 82 RKYCPLTMESENFCEEHVSLDKRTKNEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKA 141
RK P T E E C H+ NE++ L+ ++P S+ D+ASIL D I Y+ L+
Sbjct: 211 RKNKPFTTERERRC--HL-------NERYEALKLLIPSPSKGDRASILQDGIDYINELRR 261
Query: 142 RVEE 145
RV E
Sbjct: 262 RVSE 265
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
N +F LR+VVP +S++DK S+L D + Y+ LK++ E
Sbjct: 356 NHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAE 393
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 94 FCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+EHV +++ + NE+ + L +++P + + DKA++L D IK+LK+L+ RV++
Sbjct: 129 LLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKK 183
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 11/63 (17%)
Query: 91 SENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYL-------KRLKAR 142
S+N E ++R K N++ LRSVVP I+++DKASI+ D I Y+ K+L+A
Sbjct: 54 SKNIVSER---NRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAE 110
Query: 143 VEE 145
+ E
Sbjct: 111 IRE 113
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 68 MYGGCAHRSPKEICRK--YCPLTMESENFCEEHVSLDKRTKNE---KFMLLRSVVPYISE 122
M GG + P + R+ E ENF ++ ++R + + + M LRS VP ++
Sbjct: 1 MGGGSRFQEPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTN 60
Query: 123 VDKASILNDTIKYLKRLKARV 143
+ KASI+ D I Y+ L+ V
Sbjct: 61 MTKASIVEDAITYIGELQNNV 81
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
N++ L+ +VP S+ DKAS+L++ I+YLK+L+A+V
Sbjct: 230 NQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
SV=2
Length = 366
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
N++ L+ ++P S+ DK SIL+D I++LK+L+A+V+
Sbjct: 183 NQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQ 220
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 30/38 (78%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
NEK L+S++P ++ DKAS+L++ I+YLK+L+ +V+
Sbjct: 214 NEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 251
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 88 TMESENFCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
T E ++H ++R + N +F LR+++P + + DKAS+L +T++Y LK V+
Sbjct: 86 TESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQ 145
Query: 145 E 145
+
Sbjct: 146 D 146
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 82 RKYCPLTMESENFCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKR 138
RK C S +EHV +++ + +EKF+ L +++P + + DK +IL+D I +K+
Sbjct: 104 RKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQ 163
Query: 139 LKARV 143
L+ ++
Sbjct: 164 LQEQL 168
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
NEK L+ ++P ++VDKAS+L++ I+YLK L+ +V+
Sbjct: 360 NEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
NE+ L+ ++P+ S DKASIL++ I YLK L+ +++
Sbjct: 273 NERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQ 310
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
NE+ L+ ++P+ S+ DKASIL++ I YLK L+ +++
Sbjct: 274 NERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQ 311
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 103 KRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
+R+K NEK L+ ++P ++ DKAS+L++ I+YLK+L+ +V+
Sbjct: 105 RRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
+++F +LRS+VP S++D S+L I Y+K LKA+V
Sbjct: 57 SDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 93
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 108 EKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
+K LRS+VP I+++DKASI+ D + Y++ L+++ ++
Sbjct: 145 DKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKK 182
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 91 SENFCEEHVSLDKRTK---NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
S++ ++H+ +++ + ++F+ L +++P + ++DKAS+L D IK++K L+ V
Sbjct: 120 SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
N++F L++++P +++D+ASI+ + I Y+K L +EE
Sbjct: 260 NDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEE 298
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 102 DKRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
D+R + +++F +L+S+VP +++D S+L++ I Y+K LKA++
Sbjct: 54 DRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 88 TMESENFCEEHVSLDKRTK-NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
T E N E +R K NEK L+ ++P ++ K S L+D I+Y+K L+++++
Sbjct: 256 TAEMHNLAERR----RREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQ 309
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 28/38 (73%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
NE+ L+ ++P ++ DKAS+L++ I+Y+K L+ +++
Sbjct: 301 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQ 338
>sp|A4IN63|XPT_GEOTN Xanthine phosphoribosyltransferase OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=xpt PE=3 SV=1
Length = 194
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 77 PKEICRKYCPLTMESENFCEEHVSLDKRTKNEKFMLLRSVVPYISEVDKASILND 131
P + RK PLTM SE +C E S K+ NE ++ R P + D+ I++D
Sbjct: 75 PLVVARKRRPLTMTSEVYCAEVYSFTKKETNE-IIVSR---PLLDSSDRVLIIDD 125
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
+EK +L+++VP +++D AS+L++ YLK L+A+V+
Sbjct: 292 SEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVK 329
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 28/38 (73%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVE 144
NE L+ ++P ++ D++S+L+D I+Y+K L+++++
Sbjct: 294 NEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1
SV=1
Length = 368
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLK 140
N LRS++P ++ DKAS+L + I+++K LK
Sbjct: 190 NNHLAKLRSILPNTTKTDKASLLAEVIQHVKELK 223
>sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1
SV=1
Length = 344
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARVEE 145
N LRS++P ++ DKAS+L + I+++K LK + +
Sbjct: 148 NTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQ 186
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 107 NEKFMLLRSVVPYISEVDKASILNDTIKYLKRLKARV 143
+EK +L+ +VP +++D AS+L++ I+Y K LK +V
Sbjct: 135 SEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQV 171
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 90 ESENFCEEHVSLDKRTK---NEKFMLLRSVVP--YISEVDKASILNDTIKYLKRLK 140
E EN H+++++ + NE +LRS++P Y D+ASI+ I YLK L+
Sbjct: 119 EIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELE 174
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 74 HRSPKEICRKYCPLTMESENFCEEHVSLDK-----RTKNEKF----MLLRSVVPYISEVD 124
H +PK+ + ESE F E S+ + R ++EK L+ +VP + D
Sbjct: 109 HENPKKRRIQVLSSDDESEEFTREVPSVTRKGSKRRRRDEKMSNKMRKLQQLVPNCHKTD 168
Query: 125 KASILNDTIKYLKRLKARVE 144
K S+L+ TI+Y+K L+ +++
Sbjct: 169 KVSVLDKTIEYMKNLQLQLQ 188
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 98 HVSLDK---RTKNEKFMLLRSVVP--YISEVDKASILNDTIKYLKRLKARVE 144
H+++++ R NE LRS+ P YI D+ASI+ I+++K L+ V+
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQ 54
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,526,552
Number of Sequences: 539616
Number of extensions: 1898019
Number of successful extensions: 4547
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4477
Number of HSP's gapped (non-prelim): 84
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)