BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043479
(534 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 158/266 (59%), Gaps = 31/266 (11%)
Query: 1 VTVTRPVEALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRES 59
+ V P +AL+T++IQRD IDL++TD +MP MNG++L+K+I +EF +LPV+VMSSD +
Sbjct: 43 IAVDDPKKALSTLKIQRDNIDLIITDYYMPGMNGLQLKKQITQEFGNLPVLVMSSDTNKE 102
Query: 60 VIMKALASGVAFYILKPLNPDDLKNVWQYAMTYK-------------KAKSISIDEIGSF 106
++L+ G +I KP++P DL ++Q+A++ K K +S+ + +
Sbjct: 103 --EESLSCGAMGFIPKPIHPTDLTKIYQFALSNKRNGKSTLSTEQNHKDADVSVPQQITL 160
Query: 107 ELAGFSAGKFSLDDIVSRSSVNERNKNN-----KDSKRKASKK-------DKGKQTKQNA 154
K + +S N N D RK K+ D G+ Q A
Sbjct: 161 VPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESMSQPA 220
Query: 155 TAPKKPKVAWTDSLHNRFLQAIRHIGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFL 214
KK K+ WTDSLH+ FLQAIRHIGL+KAVPKKIL FM+VP LTRENVASHLQKYRIFL
Sbjct: 221 ---KKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFL 277
Query: 215 KRVAEQGASAMGKTLALRSSFASGHV 240
+RVAEQG +M + S F H+
Sbjct: 278 RRVAEQGLYSMLSDRGIDSMFRQTHI 303
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 149/267 (55%), Gaps = 33/267 (12%)
Query: 1 VTVTRPVEALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRES 59
+ V P +AL+T++ QRD IDL++TD +MP MNG++L+K+I +EF +L V+VMSSD +
Sbjct: 46 IAVDYPKKALSTLKNQRDNIDLIITDYYMPGMNGLQLKKQITQEFGNLSVLVMSSDPNKE 105
Query: 60 VIMKALASGVAFYILKPLNPDDLKNVWQYAMTYKK-------------------AKSISI 100
++L+ G +I KP+ P DL ++Q+A+TYK+ + I +
Sbjct: 106 --EESLSCGAMGFIPKPIAPTDLPKIYQFALTYKRNGKSTLSTEQNQKDANVSVPQQIML 163
Query: 101 DEIGSFELAGFSAGKFSLDDI-------VSRSSVNERNKNNKDSKRKASKKDKGKQTKQN 153
++ L S D VS S N KN K K K D G+ Q
Sbjct: 164 VPEQAYVLKTKKKNCSSKSDTRTVNSTNVSHVSTNGSRKNRK-RKPKGGPSDDGESLSQ- 221
Query: 154 ATAPKKPKVAWTDSLHNRFLQAIRHIGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIF 213
PKK K+ WT+ L + FLQAI+HIG +K VPKKIL MNVP LTRENVASHLQKYR+F
Sbjct: 222 --PPKKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLF 279
Query: 214 LKRVAEQGASAMGKTLALRSSFASGHV 240
+KRV QG +M S F H+
Sbjct: 280 VKRVVHQGRFSMLSDRGKDSMFRQTHI 306
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 143/220 (65%), Gaps = 7/220 (3%)
Query: 3 VTRPVEALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVI 61
R AL+ +R ++ D+V++D+HMP+M+G +L + + E LPV++MS+DD +SV+
Sbjct: 57 CNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMD-LPVIMMSADDSKSVV 115
Query: 62 MKALASGVAFYILKPLNPDDLKNVWQYAMTYKKAK-SISIDEIGSFELAGFSAGK---FS 117
+K + G Y++KP+ + LKN+WQ+ + K+ + ++S GS E G +
Sbjct: 116 LKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHR 175
Query: 118 LDDIVSRSSVNERNKNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIR 177
D + SSVNE N + KRK + D K+++++ KKP+V W+ LH +F+ A+
Sbjct: 176 EDADNNSSSVNEGNGRSS-RKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 178 HIGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRV 217
+G++KAVPKKILE MNVPGLTRENVASHLQKYRI+L+R+
Sbjct: 235 QLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRL 274
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 146/227 (64%), Gaps = 21/227 (9%)
Query: 9 ALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALAS 67
AL+ +R + D+V++D+HMP+M+G +L + + E LPV++MS+DD +SV++K +
Sbjct: 72 ALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMD-LPVIMMSADDSKSVVLKGVTH 130
Query: 68 GVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAG---------------FS 112
G Y++KP+ + LKN+WQ+ + ++++ + GS E G S
Sbjct: 131 GAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVS 190
Query: 113 AGKFSLDDIVSRSSVNERNKNNKDSKRKASKK--DKGKQTKQNATAPKKPKVAWTDSLHN 170
G+ ++DD + SSVNE N S+++ ++ ++G ++A+ KKP+V W+ LH
Sbjct: 191 GGEDAVDD--NSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQ 248
Query: 171 RFLQAIRHIGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRV 217
+F+ A+ +G+EKAVPKKILE MNVPGLTRENVASHLQKYRI+L+R+
Sbjct: 249 QFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRL 295
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 130/217 (59%), Gaps = 10/217 (4%)
Query: 9 ALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALAS 67
AL +R ++D DLV++D+HMP MNG L +++ LPV++MS D R + +M +
Sbjct: 46 ALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINH 105
Query: 68 GVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSLDDIV----- 122
G Y++KP+ P++LKN+WQ+ + + K + E+ S + + SL+ +V
Sbjct: 106 GACDYLIKPIRPEELKNIWQHVV---RRKCVMKKELRSSQALEDNKNSGSLETVVVSVSE 162
Query: 123 -SRSSVNERNKNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHIGL 181
S S+ + K KR + D + KK +V W+ LH +F+ A+ +G+
Sbjct: 163 CSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGI 222
Query: 182 EKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVA 218
+KAVPK+ILE MNVPGL+RENVASHLQK+R++LKR++
Sbjct: 223 DKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLS 259
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 136/237 (57%), Gaps = 23/237 (9%)
Query: 1 VTVTRPVE-ALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRE 58
VT T + AL +R ++ DLV++D+ MP+M+G +L + + E LPV+++S+
Sbjct: 43 VTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMD-LPVIMLSAHSDP 101
Query: 59 SVIMKALASGVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSL 118
+MK + G Y+LKP+ ++LKN+WQ+ + K K + S G +
Sbjct: 102 KYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNK---------SNVSNGSGNC 152
Query: 119 DDIVSRSSVNERNKNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRH 178
D + N+ K+ + ++++G + TA KKP+V WT LHN+FL A+ H
Sbjct: 153 D---------KANRKRKEQYEEEEEEERGNDND-DPTAQKKPRVLWTHELHNKFLAAVDH 202
Query: 179 IGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVAEQGASAMGKTLALRSSF 235
+G+E+AVPKKIL+ MNV LTRENVASHLQK+R+ LK+V++ + A+ S F
Sbjct: 203 LGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSDDAIQQANRA-AIDSHF 258
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 125/218 (57%), Gaps = 9/218 (4%)
Query: 2 TVTRPVEALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESV 60
T + +AL +R ++ DLV++D+ MP+M+G +L + + E LPV+++S+
Sbjct: 45 TTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMD-LPVIMLSAHSDPKY 103
Query: 61 IMKALASGVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSLDD 120
+MK + G Y+LKP+ ++LKN+WQ+ + + K+ + G + G
Sbjct: 104 VMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNGDKRDGSGNEG------ 157
Query: 121 IVSRSSVNERNKNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHIG 180
V S N N K + +D+ + ++ A KK +V WT LH +F+ A+ +G
Sbjct: 158 -VGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLG 216
Query: 181 LEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVA 218
EKA+PKKIL+ MNV LTRENVASHLQK+R++LKR++
Sbjct: 217 YEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRIS 254
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 127/223 (56%), Gaps = 21/223 (9%)
Query: 8 EALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALA 66
EAL +R ++D D+V++D++MP+M+G +L + + E LPV++MS D S +MK +
Sbjct: 45 EALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELD-LPVIMMSVDGETSRVMKGVQ 103
Query: 67 SGVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSLDDIVSRSS 126
G Y+LKP+ +LK +WQ+ + K + E+ E G+ G D ++R
Sbjct: 104 HGACDYLLKPIRMKELKIIWQHVLRKK------LQEVRDIEGCGYEGGA----DWITRYD 153
Query: 127 VNERNKNNKDSKRKASKKDKG--KQTKQNATAPKK-----PKVAWTDSLHNRFLQAIRHI 179
+D +KD K+ Q+ + P +V W+ LH++F+ A+ I
Sbjct: 154 EAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQI 213
Query: 180 GLE-KAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVAEQG 221
G + KA PKKIL+ MNVP LTRENVASHLQKYR++L R+ E+G
Sbjct: 214 GCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL-EKG 255
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 127/221 (57%), Gaps = 14/221 (6%)
Query: 3 VTRPVEALATVRIQRD----IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRE 58
VT+ +E+ + + R+ DLV++D+ MP+ +G +L EI E LPV+++S+
Sbjct: 44 VTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLL-EIGLEMD-LPVIMLSAHSDY 101
Query: 59 SVIMKALASGVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSL 118
+MK + G Y++KP+ +L+N+W + + K KS + + E +
Sbjct: 102 DSVMKGIIHGACDYLVKPVGLKELQNIWHHVVK-KNIKSYA-KLLPPSESDSVPSASRKR 159
Query: 119 DDIVSRSSVNERNKNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRH 178
D V+ S + + +D + + G T+ KKP+V W+ LH +F+ A++
Sbjct: 160 KDKVNDSGDEDDSDREEDDGEGSEQDGDGSGTR------KKPRVVWSQELHQKFVSAVQQ 213
Query: 179 IGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVAE 219
+GL+KAVPKKIL+ M++ GLTRENVASHLQKYR++LK++ E
Sbjct: 214 LGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKIDE 254
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 120/210 (57%), Gaps = 20/210 (9%)
Query: 8 EALA-TVRIQRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALA 66
EA+A ++ + +IDLV+ D HMP++NG++ I ++ LPV++MS + ++ +M+++
Sbjct: 73 EAMAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMD-LPVVIMSHEYKKETVMESIK 131
Query: 67 SGVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSLDDIVSRSS 126
G +++KP++ + + +W++ + +KS +D+ G E + DD+
Sbjct: 132 YGACDFLVKPVSKEVIAVLWRHVYRKRMSKS-GLDKPG--ESGTVESDPDEYDDL---EQ 185
Query: 127 VNERNKNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHIG-LEKAV 185
N N + SK K++ TK KP++ WT LH++F A+ +G LEKA
Sbjct: 186 DNLYESNEEGSKNTCDHKEEKSPTK-------KPRMQWTPELHHKFEVAVEKMGSLEKAF 238
Query: 186 PKKILEFM----NVPGLTRENVASHLQKYR 211
PK IL++M NV GLTR NVASHLQKYR
Sbjct: 239 PKTILKYMQEELNVQGLTRNNVASHLQKYR 268
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 17/209 (8%)
Query: 16 QRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALASGVAFYILK 75
+ +I++V+ D HMP ++G++ K I + LPV++MS D++ +MKA G Y++K
Sbjct: 77 KHEINIVIWDFHMPGIDGLQALKSITSKL-DLPVVIMSDDNQTESVMKATFYGACDYVVK 135
Query: 76 PLNPDDLKNVWQYA----MTYKKAKSISIDEIGSFELAGFSAGKFSLDDIVSRSSVNERN 131
P+ + + N+WQ+ + +K + + E+ D + R +
Sbjct: 136 PVKEEVMANIWQHIVRKRLIFKPDVAPPKPRMTWSEVFQPVQSHLVPTDGLDRDHFDSIT 195
Query: 132 KNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHI-GLEKAVPKKIL 190
N + + KK +GK+ P+KP++ WT+ LH +FL+AI I G+EKA PK ++
Sbjct: 196 INGGNGIQNMEKK-QGKK-------PRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLV 247
Query: 191 EF---MNVPGLTRENVASHLQKYRIFLKR 216
E M + G+TR NVASHLQK+RI L+
Sbjct: 248 ECLQEMRIEGITRSNVASHLQKHRINLEE 276
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 112/202 (55%), Gaps = 7/202 (3%)
Query: 19 IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALASGVAFYILKPLN 78
+DLV++D P +G+ + +E+ +F +P ++M+S + +MK +A+G ++LKP+
Sbjct: 57 VDLVISDAFFPTEDGLLILQEVTSKFG-IPTVIMASSGDTNTVMKYVANGAFDFLLKPVR 115
Query: 79 PDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSL---DDIVSRSSVNERNKNNK 135
++L N+WQ+ + + + +G+ E G ++ +RS+ E +
Sbjct: 116 IEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPL 175
Query: 136 DSK-RKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHIGLEKAVPKKILEFMN 194
+++ R G+ T K ++ WT LH +F+ A+ H+G +KAVPKKIL M
Sbjct: 176 ENEVRDDMVNYNGEITDIRDLG--KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMK 233
Query: 195 VPGLTRENVASHLQKYRIFLKR 216
V LTRE VASHLQKYR+ LK+
Sbjct: 234 VKHLTREQVASHLQKYRMQLKK 255
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 112/202 (55%), Gaps = 7/202 (3%)
Query: 19 IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALASGVAFYILKPLN 78
+DLV++D P +G+ + +E+ +F +P ++M+S + +MK +A+G ++LKP+
Sbjct: 57 VDLVISDAFFPTEDGLLILQEVTSKFG-IPTVIMASSGDTNTVMKYVANGAFDFLLKPVR 115
Query: 79 PDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSL---DDIVSRSSVNERNKNNK 135
++L N+WQ+ + + + +G+ E G ++ +RS+ E +
Sbjct: 116 IEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPL 175
Query: 136 DSK-RKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHIGLEKAVPKKILEFMN 194
+++ R G+ T K ++ WT LH +F+ A+ H+G +KAVPKKIL M
Sbjct: 176 ENEVRDDMVNYNGEITDIRDLG--KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMK 233
Query: 195 VPGLTRENVASHLQKYRIFLKR 216
V LTRE VASHLQKYR+ LK+
Sbjct: 234 VKHLTREQVASHLQKYRMQLKK 255
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 15/214 (7%)
Query: 1 VTVTRPV-EALATVRIQRD-IDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRE 58
VT+ V +A+ T+R R+ DL + ++ E + EI E LP++++S DD
Sbjct: 68 VTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSEMD-LPIIIISEDDSV 126
Query: 59 SVIMKALASGVAFYILKPLNPDDLKNVWQYAMT-YKKAKSISIDEIGSFELAGFSAGKFS 117
+ K + +G A Y++KP+ P+DL+ V+++ + ++ +S+ E A +AG+ S
Sbjct: 127 KSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKKMRERRSVVTGE------AEKAAGEKS 180
Query: 118 LDDIVSRSSVNERNKNNKDSKRKASKKDKGKQTKQN---ATAPKKPKVAWTDSLHNRFLQ 174
V S++ NK+ + S +A ++ + + A++ KK +V W + LH FL
Sbjct: 181 SS--VGDSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRACASSAKKRRVVWDEELHQNFLN 238
Query: 175 AIRHIGLEKAVPKKILEFMNVPGLTRENVASHLQ 208
A+ +GLE+AVPKKIL+ M V ++RENVASHLQ
Sbjct: 239 AVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%)
Query: 158 KKPKVAWTDSLHNRFLQAIRHIGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRV 217
KKPKV WT LH +F+QA+ +G++KAVP +ILE MNV LTR NVASHLQKYR K +
Sbjct: 146 KKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205
Query: 218 AEQGASAMGKTLALRSSFA 236
+ A A L ++ A
Sbjct: 206 LAREAEAASWNLRRHATVA 224
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 55/92 (59%)
Query: 137 SKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHIGLEKAVPKKILEFMNVP 196
SKRK S +N+ +K KV WT LH RF+QA+ +G++KAVP +ILE M +
Sbjct: 193 SKRKPSSSSSSAAAGKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIE 252
Query: 197 GLTRENVASHLQKYRIFLKRVAEQGASAMGKT 228
LTR N+ASHLQKYR K + + A A T
Sbjct: 253 CLTRHNIASHLQKYRSHRKHLMAREAEAASWT 284
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 119 DDIVSRSSVNERNKNNKDSKRKASKKDKGKQTK-QNATAPKKPKVAWTDSLHNRFLQAIR 177
DD+ + + + + D KRK S K + N +K KV WT LH RF++A+
Sbjct: 115 DDVAAETVTYD---GDSDRKRKYSSSASSKNNRISNNEGKRKVKVDWTPELHRRFVEAVE 171
Query: 178 HIGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVAEQGASAMGKT 228
+G++KAVP +ILE M V LTR NVASHLQKYR K + + A A T
Sbjct: 172 QLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAREAEAANWT 222
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 162 VAWTDSLHNRFLQAIRHIGLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVAEQG 221
V WT LH RF+QA+ +G++KAVP +ILE M + LTR N+ASHLQKYR K + +
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHMIARE 242
Query: 222 ASAMGKTLALRSSFASG 238
A A T R +A+G
Sbjct: 243 AEAASWT-QRRQIYAAG 258
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 120 DIVSRSSVNERNKNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHI 179
D++S + + +D + +K K N T+ KK V WT LH +F+QA+ +
Sbjct: 259 DLISEKTDSVDIHKKEDETKPINKSSGIKNVSGNKTSRKK--VDWTPELHKKFVQAVEQL 316
Query: 180 GLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRV 217
G+++A+P +ILE M V LTR NVASHLQK+R K +
Sbjct: 317 GVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNI 354
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 47 LPVMVMSSDDRESVIMKALASGVAFYILKPLNPDDLKNVWQYAM 90
LP +++S+D + MK +A G ++ KPL+P+ LKN+WQ+ +
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVV 139
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 50/248 (20%)
Query: 8 EALATVRIQR-DIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALA 66
+AL+ + Q+ +I L++ ++ MP ++ + +P+++++ + + L
Sbjct: 47 KALSMIEKQKKEIGLIIANIEMPHIDSHSFLNAL--LLKDIPLILINPEIKTKEPSDLLT 104
Query: 67 SGVAFYILKPLNPDDLKNVWQYAMTYK--KAKSISIDE-------IGSFELAGFSA---- 113
F + KP++ DD+KN+WQ+ + K + K I+I E ++++ F A
Sbjct: 105 KRACFSLDKPISNDDIKNMWQHVFSKKSQELKKINITEDQENVMDKDTYQIEAFRANLKR 164
Query: 114 ---------GKFSLDDIVSRSSVNERNKN--------------NKDSKRKASKKDKGKQT 150
G+ D S ++ K+ ++KRK KK G++
Sbjct: 165 QRISQASLLGRRPFIDTFSTYETFQKRKSIANVEWKTTPSYAIEIENKRKEWKKSVGRR- 223
Query: 151 KQNATAPKKPKVAWTDSLHNRFLQAIRHIGLEKAVPKKILEFMNVPGLTRENVASHLQKY 210
K W H +F+ AI +G E PK ILE MN P LT V SHLQKY
Sbjct: 224 ----------KSLWNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLTHRQVGSHLQKY 273
Query: 211 RIFLKRVA 218
+ + +++
Sbjct: 274 KAQIDQIS 281
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 15 IQRDIDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKALASGVAFY 72
+Q IDLV+T++ MP ++GI L +I +PV++MSS+D + K L+ G +
Sbjct: 123 LQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDF 182
Query: 73 ILKPLNPDDLKNVWQYA 89
++KP+ ++LKN+WQ+
Sbjct: 183 LVKPIRKNELKNLWQHV 199
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 15 IQRDIDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKALASGVAFY 72
+Q IDLV+T++ MP ++GI L +I +PV++MSS+D + K L+ G +
Sbjct: 123 LQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDF 182
Query: 73 ILKPLNPDDLKNVWQYA 89
++KP+ ++LKN+WQ+
Sbjct: 183 LVKPIRKNELKNLWQHV 199
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 19 IDLVVTDLHMPEMNGIELQKEI--NEEFTHLPVMVMSSDDRESVIMKALASGVAFYILKP 76
IDL++T+L +P ++G L + +E ++PV++MSS D +++K + G A Y++KP
Sbjct: 83 IDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKP 142
Query: 77 LNPDDLKNVWQYA 89
+ ++LKN+WQ+
Sbjct: 143 MRKNELKNLWQHV 155
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 15 IQRDIDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKALASGVAFY 72
+Q IDLV+T++ MP ++GI L I ++PV++MSS+D + K L+ G +
Sbjct: 104 MQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDF 163
Query: 73 ILKPLNPDDLKNVWQY 88
++KP+ ++LKN+WQ+
Sbjct: 164 LVKPIRKNELKNLWQH 179
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 15 IQRDIDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKALASGVAFY 72
+Q IDLV+T++ MP ++GI L I ++PV++MSS+D + K L+ G +
Sbjct: 104 MQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDF 163
Query: 73 ILKPLNPDDLKNVWQY 88
++KP+ ++LKN+WQ+
Sbjct: 164 LVKPIRKNELKNLWQH 179
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 18 DIDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKALASGVAFYILK 75
+IDLV+T++ +P M+G L I E ++PV++MSS+D S++ K + G A +++K
Sbjct: 88 NIDLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVK 147
Query: 76 PLNPDDLKNVWQYA 89
P+ ++L+N+WQ+
Sbjct: 148 PIRKNELRNLWQHV 161
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 60/98 (61%), Gaps = 8/98 (8%)
Query: 18 DIDLVVTDLHMPEMNGIELQKEI--NEEFTHLPVMVMSSDDRESVIMKALASGVAFYILK 75
+ID+++ ++ +P ++ K I N+E H+P+++MS+ D SV++K L G A Y++K
Sbjct: 73 EIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVK 132
Query: 76 PLNPDDLKNVWQYAMTYKKAKSISIDEIG----SFELA 109
PL ++L N+W + +++ + + + E +FELA
Sbjct: 133 PLRMNELLNLWTHV--WRRRRMLGLSEKNFFNDNFELA 168
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 158 KKPKVAWTDSLHNRFLQAIRHIG-LEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKR 216
+ P++ WT +LH F+ A++ +G E+A PK +LE MNV LT +V SHLQ YR +
Sbjct: 104 RAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTV--K 161
Query: 217 VAEQGASAMGK 227
++G+ GK
Sbjct: 162 CTDKGSPGEGK 172
>sp|A1W0A5|CHEY_CAMJJ Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:23/36 (strain 81-176) GN=cheY PE=3
SV=1
Length = 130
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 7 VEALATVRIQRDIDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKA 64
VEA + D+ +++TD +MPEMNG+EL K++ E + +P+++++++ ++ ++ A
Sbjct: 35 VEAWDLLTKNEDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITA 94
Query: 65 LASGVAFYILKPLNPDDLK 83
L +GV YI+KP P LK
Sbjct: 95 LKAGVNNYIVKPFTPQVLK 113
>sp|P0C635|CHEY_CAMJE Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:2 (strain NCTC 11168) GN=cheY PE=3
SV=1
Length = 130
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 7 VEALATVRIQRDIDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKA 64
VEA + D+ +++TD +MPEMNG+EL K++ E + +P+++++++ ++ ++ A
Sbjct: 35 VEAWDLLTKNEDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITA 94
Query: 65 LASGVAFYILKPLNPDDLK 83
L +GV YI+KP P LK
Sbjct: 95 LKAGVNNYIVKPFTPQVLK 113
>sp|A8FMH1|CHEY_CAMJ8 Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=cheY
PE=3 SV=1
Length = 130
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 7 VEALATVRIQRDIDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKA 64
VEA + D+ +++TD +MPEMNG+EL K++ E + +P+++++++ ++ ++ A
Sbjct: 35 VEAWDLLTKNEDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITA 94
Query: 65 LASGVAFYILKPLNPDDLK 83
L +GV YI+KP P LK
Sbjct: 95 LKAGVNNYIVKPFTPQVLK 113
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Query: 3 VTRPVEALATVRIQRD----IDLVVTDLHMPEMNGIELQKEI--NEEFTHLPVMVMSSDD 56
VT + L RI D IDLV+T++ MP +G L +I ++ ++PV++MSS D
Sbjct: 90 VTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHD 149
Query: 57 RESVIMKALASGVAFYILKPLNPDDLKNVWQYA 89
++ K L++G +++KP+ ++LKN+WQ+
Sbjct: 150 SMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 158 KKPKVAWTDSLHNRFLQAIRHIG-LEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKR 216
+ P++ WT SLH RF+ A+ +G E+A PK +LE M+V LT +V SHLQ YR +K
Sbjct: 218 RAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT-VKT 276
Query: 217 VAEQGASAMG 226
+ AS+ G
Sbjct: 277 TNKPAASSDG 286
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 158 KKPKVAWTDSLHNRFLQAIRHIG-LEKAVPKKILEFMNVPGLTRENVASHLQKYR 211
+ P++ WT +LH RF+ A+ +G E+A PK +LE M+V LT +V SHLQ YR
Sbjct: 323 RAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 377
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 158 KKPKVAWTDSLHNRFLQAIRHIG-LEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKR 216
+ P++ WT +LH RF+ A+ +G E+A PK +LE M+V LT +V SHLQ YR +
Sbjct: 212 RAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV--K 269
Query: 217 VAEQGASAMGKT 228
++ A++ G++
Sbjct: 270 TTDKAAASSGQS 281
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 155 TAPKKPKVAWTDSLHNRFLQAIRHIG-LEKAVPKKILEFMNVPGLTRENVASHLQKYRI 212
T KP++ WT LH RF+ A+ +G +KA PK I+ M V GLT ++ SHLQK+R+
Sbjct: 30 TTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 154 ATAPKKPKVAWTDSLHNRFLQAIRHIG-LEKAVPKKILEFMNVPGLTRENVASHLQKYR 211
+ A K ++ WT LH F++A+ +G E+A PK +L+ +N PGLT +V SHLQKYR
Sbjct: 226 SVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYR 284
>sp|Q9ZM64|CHEY_HELPJ Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain J99)
GN=cheY PE=3 SV=1
Length = 124
Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 7 VEALATVRIQRDIDLVVTDLHMPEMNGIELQKEI--NEEFTHLPVMVMSSDDRESVIMKA 64
VEA + D +++TD +MPEMNG++L K++ + F +P+++++++ ++ ++ A
Sbjct: 35 VEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITA 94
Query: 65 LASGVAFYILKPLNPDDLK 83
L +GV YI+KP P LK
Sbjct: 95 LKAGVNNYIVKPFTPQVLK 113
>sp|P71403|CHEY_HELPY Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=cheY PE=1 SV=2
Length = 124
Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 7 VEALATVRIQRDIDLVVTDLHMPEMNGIELQKEI--NEEFTHLPVMVMSSDDRESVIMKA 64
VEA + D +++TD +MPEMNG++L K++ + F +P+++++++ ++ ++ A
Sbjct: 35 VEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITA 94
Query: 65 LASGVAFYILKPLNPDDLK 83
L +GV YI+KP P LK
Sbjct: 95 LKAGVNNYIVKPFTPQVLK 113
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 18 DIDLVVTDLHMPEMNGIELQKEI--NEEFTHLPVMVMSSDDRESVIMKALASGVAFYILK 75
DID+++ ++ +P G+++ + I +++ +PV++MS D V++K L G A Y++K
Sbjct: 64 DIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVK 123
Query: 76 PLNPDDLKNVWQYAMTYKKAKSISIDEIGS--FELAG 110
PL ++L N+W + ++ ++ + S F+L G
Sbjct: 124 PLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVG 160
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 19 IDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKALASGVAFYILKP 76
+DL++T++ +P ++G L I E ++PV++MS+ D + + K + G A Y++KP
Sbjct: 96 VDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKP 155
Query: 77 LNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAG 110
L ++L+N+WQ+ +++ S++ D E G
Sbjct: 156 LRRNELRNLWQH--VWRRQTSLAPDSFPWNESVG 187
>sp|Q54SP4|DHKD_DICDI Hybrid signal transduction histidine kinase D OS=Dictyostelium
discoideum GN=dhkD PE=2 SV=1
Length = 1546
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 20 DLVVTDLHMPEMNGIELQKEI--NEEFTHLPVMVMSSDDRESVIMKALASGVAFYILKPL 77
DL+VTD MP M+G E+ +++ +E+F ++P++++++ E++ +K L +GV+ Y+ KP
Sbjct: 614 DLIVTDCMMPRMSGDEMVEQLRSDEQFDNIPILLLTAKADENLRIKLLQNGVSDYVNKPF 673
Query: 78 NPDDLKNVWQYAMTYKKAKSISIDEIGS 105
+ ++L MT KKAK +E+ S
Sbjct: 674 SSEELVARVVNLMTMKKAKQFLQEELSS 701
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 158 KKPKVAWTDSLHNRFLQAIRHIG-LEKAVPKKILEFMNVPGLTRENVASHLQKYRIF 213
+ P++ WT +LH F+ A++ +G E+A PK +LE M+V LT +V SHLQ YR
Sbjct: 163 RAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTI 219
>sp|Q9APD9|ZRAR_KLEOX Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca
GN=zraR PE=3 SV=1
Length = 443
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 7 VEALATVRIQRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALA 66
++AL VR ++ DLV+ D+ M EM+GIE KEI +PV++M++ ++AL
Sbjct: 39 LQALEKVR-EKVFDLVLCDIRMAEMDGIETLKEIKTFNPSIPVLIMTAYSSVDTAVEALK 97
Query: 67 SGVAFYILKPLNPDDLKNVWQYAMTYKK 94
SG Y++KPL+ D L+ A+ + +
Sbjct: 98 SGALDYLIKPLDFDKLQLTLSEALAHTR 125
>sp|P25852|ZRAR_SALTY Transcriptional regulatory protein ZraR OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=zraR PE=1 SV=2
Length = 441
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 8 EALATVRIQRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALAS 67
+ALA VR ++ DLV+ D+ M EM+GI KEI +P+++M++ ++AL +
Sbjct: 40 DALAQVR-EKVFDLVLCDVRMAEMDGIATLKEIKALNPAIPILIMTAFSSVETAVEALKA 98
Query: 68 GVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSL 118
G Y++KPL+ D L+ + A+ + + E G+ EL SA +F +
Sbjct: 99 GALDYLIKPLDFDRLQETLEKALAHTR-------ETGA-ELPSASAAQFGM 141
>sp|Q8Z333|ZRAR_SALTI Transcriptional regulatory protein ZraR OS=Salmonella typhi GN=zraR
PE=3 SV=1
Length = 441
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 8 EALATVRIQRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALAS 67
+ALA VR ++ DLV+ D+ M EM+GI KEI +P+++M++ ++AL +
Sbjct: 40 DALAQVR-EKVFDLVLCDVRMAEMDGIATLKEIKALNPAIPILIMTAFSSVETAVEALKA 98
Query: 68 GVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSL 118
G Y++KPL+ D L+ + A+ + + E G+ EL SA +F +
Sbjct: 99 GALDYLIKPLDFDRLQETLEKALAHTR-------ETGA-ELPSASAAQFGM 141
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 19 IDLVVTDLHMPEMNGIELQKEI--NEEFTHLPVMVMSSDDRESVIMKALASGVAFYILKP 76
ID+V+T++ MP ++GI L +I ++ ++PV++MSS D ++ K L+ G +++KP
Sbjct: 124 IDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKP 183
Query: 77 LNPDDLKNVWQYA 89
+ ++LK +WQ+
Sbjct: 184 IRKNELKILWQHV 196
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 19 IDLVVTDLHMPEMNGIELQKEINEE--FTHLPVMVMSSDDRESVIMKALASGVAFYILKP 76
+DL++TD MP M G EL K+I E F +PV++MSS++ + I + L G ++LKP
Sbjct: 88 VDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKP 147
Query: 77 LNPDDLKNVWQY 88
+ D+K + Y
Sbjct: 148 VKLADVKRLRSY 159
>sp|Q8X613|ZRAR_ECO57 Transcriptional regulatory protein ZraR OS=Escherichia coli O157:H7
GN=zraR PE=3 SV=1
Length = 441
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 8 EALATVRIQRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALAS 67
+AL VR +R DLV+ D+ M EM+GI KEI +PV++M++ ++AL +
Sbjct: 40 QALEQVR-ERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKT 98
Query: 68 GVAFYILKPLNPDDLKNVWQYAMTY 92
G Y++KPL+ D+L+ + A+ +
Sbjct: 99 GALDYLIKPLDFDNLQATLEKALAH 123
>sp|Q06065|ATOC_ECOLI Acetoacetate metabolism regulatory protein AtoC OS=Escherichia coli
(strain K12) GN=atoC PE=3 SV=2
Length = 461
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 20 DLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALASGVAFYILKPLNP 79
D+V+ D+ MPEM+GI+ KE+ T PV++M++ ++AL G Y++KP +
Sbjct: 50 DVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDL 109
Query: 80 DDLKNVWQYAMTYKKAK 96
D+L + Q A+ + K
Sbjct: 110 DELNLIVQRALQLQSMK 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,157,711
Number of Sequences: 539616
Number of extensions: 8481906
Number of successful extensions: 28340
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 590
Number of HSP's that attempted gapping in prelim test: 26508
Number of HSP's gapped (non-prelim): 1729
length of query: 534
length of database: 191,569,459
effective HSP length: 122
effective length of query: 412
effective length of database: 125,736,307
effective search space: 51803358484
effective search space used: 51803358484
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)