BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043480
(493 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 291/509 (57%), Positives = 371/509 (72%), Gaps = 25/509 (4%)
Query: 1 MIQKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRF 60
M Q LGA RL YR++I+NLVK+G+ID AV VFDEM S+ RVFS DYNRFIGVL+R SRF
Sbjct: 1 MHQTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRF 60
Query: 61 DLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL------------ 108
+L + Y M P+GFSL PFTYSRFISGLC+VK F LI+ LL +M+ L
Sbjct: 61 ELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVY 120
Query: 109 ------------ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGI 156
A++ F MV +GREPDVV+YTI+I+GL +A + AV+ W MI +G+
Sbjct: 121 LDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGV 180
Query: 157 KPDNKACAALVVGLCGDGKVDLAYELTVGAMK-GKVEFGVLIYNALISGFCRTGRIRRAM 215
PDNKACAALVVGLC KVDLAYE+ +K +V+ ++YNALISGFC+ GRI +A
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE 240
Query: 216 AIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGL 275
A+KS+M GCEPDLVTYN +LNYY D ML AE ++ EM GI+ D YSYNQLLK
Sbjct: 241 ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRH 300
Query: 276 CNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDV 335
C + DK Y FMVK+ME +G D VSY+T+IE FC+ TR+AY+LFE MR++G+ ++V
Sbjct: 301 CRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNV 360
Query: 336 VTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLD 395
VT+T LIKAFLREG+S++A+KLL+QM + LSPDRI YTTI+D LCKS + AYGVF D
Sbjct: 361 VTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFND 420
Query: 396 MVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKK 455
M+E ITPD ISYN+LI+GLC+S RV+EA+ L+E+M+ + PDE+TFK +IGGL++ KK
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Query: 456 LELACRLWDQMMEKGFTLDKTVSAALIEA 484
L A ++WDQMM+KGFTLD+ VS LI+A
Sbjct: 481 LSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 164/371 (44%), Gaps = 12/371 (3%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLV-QFYYQQM 70
Y I+ L +AG + AV +++ M +S + + L + DL + +++
Sbjct: 152 YTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEI 211
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTI 130
L+ Y+ ISG C+ L M K+ G EPD+VTY +
Sbjct: 212 KSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI-----------GCEPDLVTYNV 260
Query: 131 VIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGK 190
+++ +A M+ +GI+ D + L+ C D Y V M+ +
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR 320
Query: 191 VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAE 250
V+ Y+ LI FCR R+A + M+ G ++VTY +++ + E A+
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 251 KLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAF 310
KL+ +M G+ PD Y +L LC S +DKAY +E + D +SYN++I
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
C+ G+ A KLFE M+ + D +TF +I +R + A K+ +QM + DR
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500
Query: 371 ILYTTIIDCLC 381
+ T+I C
Sbjct: 501 DVSDTLIKASC 511
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 234 bits (598), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 153/539 (28%), Positives = 257/539 (47%), Gaps = 61/539 (11%)
Query: 12 YRAQIS-NLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
YR ++S N + +D+AV +F EM +S +++++ + + + +FDLV + ++M
Sbjct: 32 YREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM 91
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL---------------------- 108
LG S +TY+ I+ LC + +L M KL
Sbjct: 92 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
Query: 109 --ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAAL 166
A+ + +MV G +PD VT+T ++ GL + + +AV E M+ G +PD A+
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 167 VVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGC 226
+ GLC G+ DLA L KGK+E V+IY+ +I C+ + A+ + + M G
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 227 EPDL-----------------------------------VTYNAILNYYCDEVMLDEAEK 251
PD+ VT+N++++ + E L EAEK
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
L EM I+P++ +YN L+ G C ++LD+A + L D V+YNT+I FC
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 371
K + +LF M RRG+ + VT+T LI F + A+ + QM + P+ +
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEM 431
Y T++D LCK+ ++ A VF + + + PD+ +YN + G+CK+ +V + L+ +
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDA 490
++G PD + + +I G ++ E A L+ +M E G D LI A HL+D
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA-HLRDG 569
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 183/400 (45%), Gaps = 26/400 (6%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y A I+ L K G D A+++ ++M + + Y+ I L ++ D + +
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNM----------------DKLALE-- 111
M G FTYS IS LC ++ + LL +M D A E
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 112 ------VFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAA 165
+F +M+ + +P++VTY +I+G C D+A Q + M+ PD
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 166 LVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNG 225
L+ G C KV EL + + + Y LI GF + A + M +G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 226 CEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAY 285
P+++TYN +L+ C L++A + ++ +EPD+Y+YN + +G+C + +++ +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 286 MFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKA 344
+ KG++ D ++YNT+I FCK G AY LF M+ G D T+ LI+A
Sbjct: 506 DLFCS-LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 345 FLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSR 384
LR+G A + +L+ +MR + D Y + D L R
Sbjct: 565 HLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 11/272 (4%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + + + I K G + +A +FDEM Q + + YN I H R D
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
Q + M TY+ I+G C+ K ++D M E+F M +G
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK------VVDGM-----ELFRDMSRRGLV 412
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
+ VTYT +I G +A + D A ++ M+ +G+ P+ L+ GLC +GK++ A +
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
K K+E + YN + G C+ G++ + + G +PD++ YN +++ +C
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKG 274
+ + +EA L ++M+ G PD +YN L++
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%)
Query: 354 AEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALIN 413
A L +M P + ++ ++ + K ++ M G++ ++ +YN +IN
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 414 GLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTL 473
LC+ S++S A+ + +M G P VT L+ G ++ A L DQM+E G+
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 474 DKTVSAALIEAIHLQDAANK 493
D L+ + + A++
Sbjct: 169 DTVTFTTLVHGLFQHNKASE 188
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 247/470 (52%), Gaps = 21/470 (4%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
++ A+ +F +M +S +D+NR + +++ ++D+V ++M LG +T++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
I+ C +L AL + KM+ G EPD VT +++G C+ A
Sbjct: 126 VINCFCCCFQVSL-----------ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
V + M+E G KPD A A++ LC +V+ A++ + + V+ Y AL++G
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
C + R A + S M P+++TY+A+L+ + + EA++L EM I+PD
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LRDKVSYNTVIEAFCKGGQTRRAYKLF 323
+ +Y+ L+ GLC +++D+A M M +KG L D VSYNT+I FCK + KLF
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQ-MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
M +RG+ + VT+ LI+ F + G A++ +QM +SPD Y ++ LC +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
E+ A +F DM ++ + D+++Y +I G+CK+ +V EA L+ + ++G PD VT+
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 444 KLLIGGLVQEKKLELACRLWDQMMEKGF-----TL---DKTVSAALIEAI 485
++ GL + L L+ +M ++G TL D T+SA LI+ +
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKM 523
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 198/418 (47%), Gaps = 23/418 (5%)
Query: 4 KLGAQ--RLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFD 61
KLG + R+ + ++ + + AV + D+M + + + YN I L + R +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 62 LVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGR 121
+++++ G TY+ ++GLC ++ A + M+ K
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS-----------DAARLLSDMIKKKI 256
Query: 122 EPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYE 181
P+V+TY+ ++D K + +A + +E M+ I PD ++L+ GLC ++D A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 182 LTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYC 241
+ + V+ YN LI+GFC+ R+ M + M G + VTYN ++ +
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 242 DEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV 301
+D+A++ +M+ GI PD+++YN LL GLC++ +L+KA + + + D V
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 302 SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM 361
+Y TVI CK G+ A+ LF + +G++ D+VT+T ++ +G E L +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 362 RGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSS 419
+ L + DC +I + + M+ G P ++ + +G+CK +
Sbjct: 497 KQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLL--KDIKSGVCKKA 544
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 163/312 (52%)
Query: 173 DGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVT 232
D K++ A +L +K + ++ +N L+S + + +++ M+ G DL T
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 233 YNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 292
+N ++N +C + A ++ +M G EPD + L+ G C N++ A + K +
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 293 EAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSA 352
E D V+YN +I++ CK + A+ F+ + R+GI +VVT+T L+ +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 353 MAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALI 412
A +LL+ M ++P+ I Y+ ++D K+ ++ A +F +MV I PD+++Y++LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 413 NGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFT 472
NGLC R+ EA +++ M +G D V++ LI G + K++E +L+ +M ++G
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 473 LDKTVSAALIEA 484
+ LI+
Sbjct: 363 SNTVTYNTLIQG 374
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 128/248 (51%), Gaps = 2/248 (0%)
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKV 301
++ L++A L +M P + +N+LL + + D + + KKME G+R D
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD-VVISLGKKMEVLGIRNDLY 121
Query: 302 SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM 361
++N VI FC Q A + M + G E D VT L+ F R + A L+++M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 362 RGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRV 421
+ PD + Y IID LCK++ + A+ F ++ +GI P+V++Y AL+NGLC SSR
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 422 SEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAAL 481
S+A L +M + P+ +T+ L+ V+ K+ A L+++M+ D ++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 482 IEAIHLQD 489
I + L D
Sbjct: 302 INGLCLHD 309
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + Y A + VK G + +A +F+EM + + + Y+ I L H R D
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
+ M G +Y+ I+G C+ K + +++F +M +G
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV-----------EDGMKLFREMSQRGLV 362
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
+ VTY +I G +A + DKA + + M GI PD L+ GLC +G+++ A +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
K +++ ++ Y +I G C+TG++ A ++ + G +PD+VTY +++ C
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 243 EVMLDEAEKLVMEMESCGI 261
+ +L E E L +M+ G+
Sbjct: 483 KGLLHEVEALYTKMKQEGL 501
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 341 LIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQG 400
L K LR+ A L + M P + + ++ + K ++ + M G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 401 ITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELAC 460
I D+ ++N +IN C +VS A+ + +M G PD VT L+ G + ++ A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 461 RLWDQMMEKGFTLDKTVSAALIEAI 485
L D+M+E G+ D A+I+++
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSL 200
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 152/548 (27%), Positives = 256/548 (46%), Gaps = 60/548 (10%)
Query: 2 IQKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFD 61
++ R YR N + +D AV++F +M +S +++++ + + + ++FD
Sbjct: 39 VRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD 98
Query: 62 LVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL------------- 108
LV +QM LG S +TYS I+ C +L +L M KL
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 109 -----------ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIK 157
A+ + +MV G +PD T+ +I GL + +AV + M+ G +
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 158 PDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAI 217
PD +V GLC G +DLA L +GK+E GV+IYN +I C + A+ +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 218 KSFMKWNGCEPDLVTYNAILNYYCD----------------------------------- 242
+ M G P++VTYN+++ C+
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVS 302
E L EAEKL EM I+PD+++Y+ L+ G C ++LD+A + + V+
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 303 YNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 362
YNT+I+ FCK + +LF M +RG+ + VT+T LI F + A+ + QM
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 363 GMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVS 422
+ PD + Y+ ++D LC + ++ TA VF + + PD+ +YN +I G+CK+ +V
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 423 EAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI 482
+ L+ + ++G P+ VT+ ++ G ++ E A L+ +M E+G D LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 483 EAIHLQDA 490
A HL+D
Sbjct: 579 RA-HLRDG 585
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 219/463 (47%), Gaps = 13/463 (2%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
I AV + +M + + S +N I L RH+R +M G TY
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
++GLC+ + LAL + KM EP VV Y +ID LC K + A
Sbjct: 227 VVNGLCKRGDI-----------DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
+ + M GI+P+ +L+ LC G+ A L ++ K+ V+ ++ALI
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
F + G++ A + M +PD+ TY++++N +C LDEA+ + M S P+
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVSYNTVIEAFCKGGQTRRAYKLF 323
V +YN L+KG C + ++D+ M + ++M +GL + V+Y T+I F + + A +F
Sbjct: 396 VVTYNTLIKGFCKAKRVDEG-MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
+ M G+ D++T++IL+ G A + ++ + PD Y +I+ +CK+
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
++ + +F + +G+ P+V++Y +++G C+ EA L+ EM+ G PD T+
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 444 KLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
LI +++ + L +M F D + + +H
Sbjct: 575 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLH 617
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 266 YSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEG 325
Y Y ++ N +LD A ++++ V ++ ++ A K + L E
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 326 MRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSRE 385
M+ GI ++ T++ILI F R ++A +L +M + PD + ++++ C
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 386 IGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKL 445
I A + MVE G PD ++N LI+GL + +R SEA+ L + M ++G PD VT+ +
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 446 LIGGLVQEKKLELACRLWDQM----MEKGFTLDKTVSAALIEAIHLQDAAN 492
++ GL + ++LA L +M +E G + T+ AL ++ DA N
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
P + ++ ++ + K + + M GI+ ++ +Y+ LIN C+ S++S A+ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHL 487
+M G PD VT L+ G ++ A L QM+E G+ D LI +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 488 QDAANK 493
+ A++
Sbjct: 199 HNRASE 204
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 230/467 (49%), Gaps = 13/467 (2%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I + + G I +A H+ M I Y+ + R D V + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G + Y I LC + A E F +M+ +G PD V YT +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAE-----------AEEAFSEMIRQGILPDTVVYTTL 357
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
IDG CK + A + + M I PD A++ G C G + A +L +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
E + + LI+G+C+ G ++ A + + M GC P++VTY +++ C E LD A +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAF 310
L+ EM G++P++++YN ++ GLC S +++A + +V + EA GL D V+Y T+++A+
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA-VKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
CK G+ +A ++ + M +G++ +VTF +L+ F G EKLLN M ++P+
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEE 430
+ +++ C + A ++ DM +G+ PD +Y L+ G CK+ + EA L++E
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 431 MQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTV 477
M+ +G T+ +LI G ++ KK A ++DQM +G DK +
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 228/481 (47%), Gaps = 14/481 (2%)
Query: 6 GAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDY-NRFIGVLIRHS-RFDLV 63
G+ ++ LV GL+ +A VF++M V S+D N ++ L + +
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGL-VLSVDSCNVYLTRLSKDCYKTATA 230
Query: 64 QFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREP 123
+++ +G +Y+ I +C++ + LL L +E+ KG P
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL-----LLMEL------KGYTP 279
Query: 124 DVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELT 183
DV++Y+ V++G C+ E DK + E M G+KP++ +++ LC K+ A E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 184 VGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDE 243
++ + ++Y LI GFC+ G IR A M PD++TY AI++ +C
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 244 VMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSY 303
+ EA KL EM G+EPD ++ +L+ G C + + A+ ++A + V+Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 304 NTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRG 363
T+I+ CK G A +L M + G++ ++ T+ ++ + G+ A KL+ +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 364 MNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSE 423
L+ D + YTT++D CKS E+ A + +M+ +G+ P ++++N L+NG C + +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 424 AMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIE 483
L M +G P+ TF L+ L+ A ++ M +G D L++
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 484 A 484
Sbjct: 640 G 640
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 218/470 (46%), Gaps = 14/470 (2%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y ++ + G +D+ + + M + + S Y IG+L R + + + +M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G Y+ I G C+ + + A + F++M S+ PDV+TYT +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDI-----------RAASKFFYEMHSRDITPDVLTYTAI 392
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
I G C+ + +A + + M G++PD+ L+ G C G + A+ + ++
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
V+ Y LI G C+ G + A + M G +P++ TYN+I+N C ++EA K
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDK-VSYNTVIEAF 310
LV E E+ G+ D +Y L+ C S ++DKA ++K+M KGL+ V++N ++ F
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE-ILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
C G KL M +GI + TF L+K + + A + M + PD
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEE 430
Y ++ CK+R + A+ +F +M +G + V +Y+ LI G K + EA ++++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 431 MQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAA 480
M+ G D+ F + K+ + D+++E + +D+ + A
Sbjct: 692 MRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE-NYLVDEQLRGA 740
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 135/243 (55%), Gaps = 5/243 (2%)
Query: 255 EMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKG 313
E G+ +V SYN ++ +C ++ +A+ ++ ME KG D +SY+TV+ +C+
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL-MELKGYTPDVISYSTVVNGYCRF 294
Query: 314 GQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILY 373
G+ + +KL E M+R+G++ + + +I R A AE+ ++M + PD ++Y
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 354
Query: 374 TTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQI 433
TT+ID CK +I A F +M + ITPDV++Y A+I+G C+ + EA L+ EM
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 434 RGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQ---DA 490
+G PD VTF LI G + ++ A R+ + M++ G + + LI+ + + D+
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 491 ANK 493
AN+
Sbjct: 475 ANE 477
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 89/241 (36%), Gaps = 56/241 (23%)
Query: 5 LGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQ 64
L A + Y + K+G +D+A + EM
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEM----------------------------- 552
Query: 65 FYYQQMHPLGFSLTP--FTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
LG L P T++ ++G C ++ +L++ +KL + M++KG
Sbjct: 553 --------LGKGLQPTIVTFNVLMNGFC-------LHGMLEDGEKL----LNWMLAKGIA 593
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
P+ T+ ++ C A ++ M G+ PD K LV G C + A+ L
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 183 TVGAMKGK-VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYC 241
MKGK V Y+ LI GF + + A + M+ G D I +++
Sbjct: 654 -FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD----KEIFDFFS 708
Query: 242 D 242
D
Sbjct: 709 D 709
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 250/502 (49%), Gaps = 49/502 (9%)
Query: 6 GAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQF 65
G R I R ++S+++K +D AV +F +M +S +++N+ + + + ++F+LV
Sbjct: 48 GDYREILRNRLSDIIK---VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVIS 104
Query: 66 YYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDV 125
+QM LG S +TYS FI+ C +L AL V KM+ G EPD+
Sbjct: 105 LGEQMQTLGISHDLYTYSIFINCFCRRSQLSL-----------ALAVLAKMMKLGYEPDI 153
Query: 126 VTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVG 185
VT + +++G C +K AV + M+E G KPD L+ GL K A L
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 186 AMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVM 245
++ + ++ Y +++G C+ G I A+++ M+ E D+V YN I++ C
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 246 LDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNT 305
+D+A L EM++ GI PDV++Y+ L+ LCN + A + +E K + V+++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 306 VIEAFCKGGQTRRAYKLFEGMRRRGIELD------------------------------- 334
+I+AF K G+ A KL++ M +R I+ D
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 335 ----VVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAY 390
VVT++ LIK F + +L +M L + + YTT+I ++R+ A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 391 GVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGL 450
VF MV G+ P++++YN L++GLCK+ ++++AM ++E +Q PD T+ ++I G+
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 451 VQEKKLELACRLWDQMMEKGFT 472
+ K+E L+ + KG +
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVS 535
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 226/463 (48%), Gaps = 13/463 (2%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
I AV + D+M + + + + I L H++ QM G TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
++GLC+ + LAL + KM E DVV Y +IDGLCK K D A
Sbjct: 229 VVNGLCKRGDI-----------DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
+ + M GI+PD ++L+ LC G+ A L ++ K+ V+ ++ALI
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
F + G++ A + M +PD+ TY++++N +C LDEA+ + M S P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVSYNTVIEAFCKGGQTRRAYKLF 323
V +Y+ L+KG C + ++++ M + ++M +GL + V+Y T+I F + A +F
Sbjct: 398 VVTYSTLIKGFCKAKRVEEG-MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
+ M G+ +++T+ IL+ + G A A + ++ + PD Y +I+ +CK+
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
++ + +F ++ +G++P+VI+YN +I+G C+ EA L ++M+ G P+ T+
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 444 KLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
LI +++ E + L +M GF D + + +H
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 161/315 (51%)
Query: 175 KVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYN 234
KVD A +L +K + ++ +N L+S + + +++ M+ G DL TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 235 AILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEA 294
+N +C L A ++ +M G EPD+ + + LL G C+S ++ A + + +E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 295 KGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMA 354
D ++ T+I + A L + M +RG + D+VT+ ++ + G +A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 355 EKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALING 414
LL +M + D ++Y TIID LCK + + A +F +M +GI PDV +Y++LI+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 415 LCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLD 474
LC R S+A L +M R +P+ VTF LI V+E KL A +L+D+M+++ D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 475 KTVSAALIEAIHLQD 489
++LI + D
Sbjct: 363 IFTYSSLINGFCMHD 377
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 143/311 (45%), Gaps = 25/311 (8%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + + A I VK G + +A ++DEM + + Y+ I H R D
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNF-----------------------TLIN 99
+ ++ M TYS I G C+ K TLI+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 100 ILLDNMD-KLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKP 158
D A VF +MVS G P+++TY I++DGLCK + KA+ +E++ + ++P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 159 DNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIK 218
D ++ G+C GKV+ +EL V V+ YN +ISGFCR G A ++
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 219 SFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
MK +G P+ TYN ++ + + + +L+ EM SCG D + L+ + +
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHD 620
Query: 279 NQLDKAYMFMV 289
+LDK+++ M+
Sbjct: 621 GRLDKSFLDML 631
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
P + + ++ + K + + M GI+ D+ +Y+ IN C+ S++S A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHL 487
+M G PD VT L+ G K++ A L DQM+E G+ D LI + L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 488 QDAANK 493
+ A++
Sbjct: 201 HNKASE 206
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 263/557 (47%), Gaps = 94/557 (16%)
Query: 6 GAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQF 65
G R I R ++S+++K +D AV +F +M +S +++N+ + + + ++F+LV
Sbjct: 48 GDYREILRNRLSDIIK---VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVIS 104
Query: 66 YYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDV 125
+QM LG S +TYS FI+ C +L AL V KM+ G EPD+
Sbjct: 105 LGEQMQTLGISHDLYTYSIFINCFCRRSQLSL-----------ALAVLAKMMKLGYEPDI 153
Query: 126 VTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPD--------------NKACAA------ 165
VT + +++G C +K AV + M+E G KPD NKA A
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 166 ---------------LVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGR 210
+V GLC G +DLA L +++ V+I+N +I C+
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 211 IRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD---------------------------- 242
+ A+ + + M+ G P++VTYN+++N C+
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 243 -------EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA---YMFMVKKM 292
E L EAEKL EM I+PD +YN L+ G C N+LD+A + FMV K
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK- 392
Query: 293 EAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSA 352
L + +YNT+I FCK + +LF M +RG+ + VT+T +I+ F + G
Sbjct: 393 --DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 353 MAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALI 412
A+ + QM + D + Y+ ++ LC ++ TA +F + + + ++ YN +I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 413 NGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFT 472
G+CK+ +V EA L+ + I+ PD VT+ +I GL ++ L+ A L+ +M E G
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 473 LDKTVSAALIEAIHLQD 489
+ LI A +L+D
Sbjct: 568 PNSGTYNTLIRA-NLRD 583
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 179/418 (42%), Gaps = 46/418 (11%)
Query: 1 MIQKLGAQR--LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHS 58
M+Q+ G Q + Y ++ L K G ID A+++ ++M + + + +N I L ++
Sbjct: 214 MVQR-GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 59 RFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVS 118
++ + +M G TY+ I+ LC ++ + LL NM +
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM-----------LE 321
Query: 119 KGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDL 178
K P+VVT+ +ID K + +A + E MI+ I PD L+ G C ++D
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 179 AYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILN 238
A ++ + + YN LI+GFC+ R+ + + M G + VTY I+
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 239 YYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA-------------- 284
+ D A+ + +M S + D+ +Y+ LL GLC+ +LD A
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 285 ----YMFMVKKM-------EAKGL-------RDKVSYNTVIEAFCKGGQTRRAYKLFEGM 326
Y M++ M EA L D V+YNT+I C + A LF M
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 327 RRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSR 384
+ G + T+ LI+A LR+ A + +L+ +MR D + + + L R
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 151/319 (47%), Gaps = 17/319 (5%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + + A I K G + +A + +EM Q + +I YN I H+R D
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
+ ++ M TY+ I+G C+ K + +E+F +M +G
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV-----------EDGVELFREMSQRGLV 430
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
+ VTYT +I G +A + D A ++ M+ N + D + L+ GLC GK+D A +
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
K ++E + IYN +I G C+ G++ A + + +PD+VTYN +++ C
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCS 547
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF-MVKKMEAKGLRDKV 301
+ +L EA+ L +M+ G P+ +YN L++ N D+A ++K+M + G
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMRSSGFVGDA 605
Query: 302 SYNTVIEAFCKGGQTRRAY 320
S +++ G+ +++
Sbjct: 606 STISLVTNMLHDGRLDKSF 624
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
P + + ++ + K + + M GI+ D+ +Y+ IN C+ S++S A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHL 487
+M G PD VT L+ G K++ A L DQM+E G+ D LI + L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 488 QDAANK 493
+ A++
Sbjct: 201 HNKASE 206
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 244/486 (50%), Gaps = 15/486 (3%)
Query: 4 KLG--AQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFD 61
KLG + + ++ G + +AV + D M + R + + I L R
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 62 LVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGR 121
+M GF TY ++ LC+ N LAL++F KM +
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN-----------SALALDLFRKMEERNI 241
Query: 122 EPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYE 181
+ VV Y+IVID LCK FD A+ + M GIK D ++L+ GLC DGK D +
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 182 LTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYC 241
+ + + V+ ++ALI F + G++ A + + M G PD +TYN++++ +C
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 242 DEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDK 300
E L EA ++ M S G EPD+ +Y+ L+ C + ++D M + +++ +KGL +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG-MRLFREISSKGLIPNT 420
Query: 301 VSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQ 360
++YNT++ FC+ G+ A +LF+ M RG+ VVT+ IL+ G A ++ +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 361 MRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSR 420
M+ ++ +Y II +C + ++ A+ +F + ++G+ PDV++YN +I GLCK
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 421 VSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAA 480
+SEA L+ +M+ G PD+ T+ +LI + L + L ++M GF+ D +
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 481 LIEAIH 486
+I+ +
Sbjct: 601 VIDMLS 606
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 231/469 (49%), Gaps = 19/469 (4%)
Query: 9 RLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQ 68
+L Y+ ++ N + ++ A+ +F+ M QS ID+NR + R ++DLV + +
Sbjct: 35 KLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94
Query: 69 QMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTY 128
M G +T + I+ C K A V + G EPD +T+
Sbjct: 95 GMELNGIEHDMYTMTIMINCYCRKKKLLF-----------AFSVLGRAWKLGYEPDTITF 143
Query: 129 TIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMK 188
+ +++G C +AV + M+E +PD + L+ GLC G+V A L +
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL----ID 199
Query: 189 GKVEFGV----LIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEV 244
VE+G + Y +++ C++G A+ + M+ + +V Y+ +++ C +
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 245 MLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYN 304
D+A L EME GI+ DV +Y+ L+ GLCN + D + + + + D V+++
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 305 TVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGM 364
+I+ F K G+ A +L+ M RGI D +T+ LI F +E A ++ + M
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 365 NLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEA 424
PD + Y+ +I+ CK++ + +F ++ +G+ P+ I+YN L+ G C+S +++ A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 425 MHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTL 473
L++EM RG P VT+ +L+ GL +L A ++++M + TL
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 205/426 (48%), Gaps = 16/426 (3%)
Query: 69 QMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTY 128
Q PL TP ++R S + K + L+ L M G E D+ T
Sbjct: 63 QSRPLP---TPIDFNRLCSAVARTKQYDLV-----------LGFCKGMELNGIEHDMYTM 108
Query: 129 TIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMK 188
TI+I+ C+ K+ A + G +PD + LV G C +G+V A L ++
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 189 GKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDE 248
K ++ + LI+G C GR+ A+ + M G +PD VTY +LN C
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 249 AEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVI 307
A L +ME I+ V Y+ ++ LC D A + + +ME KG++ D V+Y+++I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA-LSLFNEMEMKGIKADVVTYSSLI 287
Query: 308 EAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLS 367
C G+ K+ M R I DVVTF+ LI F++EG A++L N+M ++
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
PD I Y ++ID CK + A +F MV +G PD+++Y+ LIN CK+ RV + M L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHL 487
+ E+ +G P+ +T+ L+ G Q KL A L+ +M+ +G L++ +
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 488 QDAANK 493
NK
Sbjct: 468 NGELNK 473
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 175/351 (49%), Gaps = 16/351 (4%)
Query: 142 DKAVQAWEHMIENGIKPD----NKACAALVVGLCGDGKVDLAYELTVGAMKG----KVEF 193
+ A+ +E MI++ P N+ C+A+ Y+L +G KG +E
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVAR--------TKQYDLVLGFCKGMELNGIEH 103
Query: 194 GVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLV 253
+ +I+ +CR ++ A ++ G EPD +T++ ++N +C E + EA LV
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 254 MEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKG 313
M PD+ + + L+ GLC ++ +A + + + +E D+V+Y V+ CK
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 314 GQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILY 373
G + A LF M R I+ VV ++I+I + ++GS A L N+M + D + Y
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 374 TTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQI 433
+++I LC + + +M+ + I PDV++++ALI+ K ++ EA LY EM
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 434 RGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
RG PD +T+ LI G +E L A +++D M+ KG D + LI +
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 191/416 (45%), Gaps = 30/416 (7%)
Query: 7 AQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFY 66
+ Y ++ L K+G A+ +F +M + N + + Y+ I L + FD
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 67 YQQMHPLGFSLTPFTYSRFISGLC----------------------EVKNFT-LINILLD 103
+ +M G TYS I GLC +V F+ LI++ +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 104 NMDKL-ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKA 162
L A E++++M+++G PD +TY +IDG CK +A Q ++ M+ G +PD
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 163 CAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMK 222
+ L+ C +VD L + + YN L+ GFC++G++ A + M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 223 WNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLD 282
G P +VTY +L+ CD L++A ++ +M+ + + YN ++ G+CN++++D
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 283 KAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTIL 341
A+ + KG++ D V+YN +I CK G A LF M+ G D T+ IL
Sbjct: 508 DAWSLFC-SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Query: 342 IKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMV 397
I+A L + +L+ +M+ S D +ID L R + FLDM+
Sbjct: 567 IRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS----FLDML 618
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 256/547 (46%), Gaps = 88/547 (16%)
Query: 12 YRAQIS-NLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
YR ++S N + +D AV +F EM +S I++++ + + + ++FD+V +QM
Sbjct: 48 YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM 107
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTI 130
LG +TYS I+ C LAL V KM+ G EP++VT +
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLP-----------LALAVLGKMMKLGYEPNIVTLSS 156
Query: 131 VIDGLCKAKEFDKAVQAWEHMIENGIKPD--------------NKACAAL---------- 166
+++G C +K +AV + M G +P+ NKA A+
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 167 -----------VVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAM 215
V GLC G DLA+ L +GK+E GVLIYN +I G C+ + A+
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 216 AIKSFMKWNGCEPDLVTYNAILNYYCD--------------------------------- 242
+ M+ G P++VTY+++++ C+
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 243 --EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA---YMFMVKKMEAKGL 297
E L EAEKL EM I+P + +Y+ L+ G C ++LD+A + FMV K
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK---HCF 393
Query: 298 RDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKL 357
D V+YNT+I+ FCK + ++F M +RG+ + VT+ ILI+ + G MA+++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 358 LNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCK 417
+M + P+ + Y T++D LCK+ ++ A VF + + P + +YN +I G+CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 418 SSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTV 477
+ +V + L+ + ++G PD V + +I G ++ E A L+ +M E G +
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 478 SAALIEA 484
LI A
Sbjct: 574 YNTLIRA 580
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 227/463 (49%), Gaps = 13/463 (2%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
I +AV + D+M + + ++ +N I L H++ +M G TY
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
++GLC+ + LA + +KM EP V+ Y +IDGLCK K D A
Sbjct: 227 VVNGLCKRGD-----------TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
+ ++ M GI+P+ ++L+ LC G+ A L ++ K+ V ++ALI
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
F + G++ A + M +P +VTY++++N +C LDEA+++ M S PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVSYNTVIEAFCKGGQTRRAYKLF 323
V +YN L+KG C ++++ M + ++M +GL + V+YN +I+ + G A ++F
Sbjct: 396 VVTYNTLIKGFCKYKRVEEG-MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
+ M G+ +++T+ L+ + G A + ++ + P Y +I+ +CK+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
++ + +F ++ +G+ PDV++YN +I+G C+ EA L++EM+ G P+ +
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 444 KLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
LI +++ E + L +M GF D + + +H
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 167/316 (52%), Gaps = 2/316 (0%)
Query: 175 KVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYN 234
K+D A L +K + ++ ++ L+S + + +++ M+ G + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 235 AILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEA 294
++N +C L A ++ +M G EP++ + + LL G C+S ++ +A + +V +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA-VALVDQMFV 179
Query: 295 KGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAM 353
G + + V++NT+I + A L + M +G + D+VT+ +++ + G + +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 354 AEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALIN 413
A LLN+M L P ++Y TIID LCK + + A +F +M +GI P+V++Y++LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 414 GLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTL 473
LC R S+A L +M R +PD TF LI V+E KL A +L+D+M+++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 474 DKTVSAALIEAIHLQD 489
++LI + D
Sbjct: 360 SIVTYSSLINGFCMHD 375
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 25/311 (8%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + A I VK G + +A ++DEM + + + Y+ I H R D
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVK-------------------NFTLINILLD 103
+ ++ M TY+ I G C+ K N NIL+
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 104 NMDK-----LALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKP 158
+ + +A E+F +MVS G P+++TY ++DGLCK + +KA+ +E++ + ++P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 159 DNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIK 218
++ G+C GKV+ ++L V+ V+ YN +ISGFCR G A A+
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 219 SFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
MK +G P+ YN ++ + + + +L+ EM SCG D + L+ + +
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHD 618
Query: 279 NQLDKAYMFMV 289
+LDK+++ M+
Sbjct: 619 GRLDKSFLDML 629
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%)
Query: 354 AEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALIN 413
A L +M P I ++ ++ + K + + M GI + +Y+ LIN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 414 GLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTL 473
C+ S++ A+ + +M G P+ VT L+ G K++ A L DQM G+
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 474 DKTVSAALIEAIHLQDAANK 493
+ LI + L + A++
Sbjct: 185 NTVTFNTLIHGLFLHNKASE 204
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 249/489 (50%), Gaps = 18/489 (3%)
Query: 7 AQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFY 66
+IY+ I +L K +++A+ + +EM C + +N I L + R +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 67 YQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVV 126
+M GF+ TY ++GLC++ A ++F+++ +P++V
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRV-----------DAAKDLFYRI----PKPEIV 354
Query: 127 TYTIVIDGLCKAKEFDKAVQAWEHMIEN-GIKPDNKACAALVVGLCGDGKVDLAYELTVG 185
+ +I G D A M+ + GI PD +L+ G +G V LA E+
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 186 AMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVM 245
+ V Y L+ GFC+ G+I A + + M +G +P+ V +N +++ +C E
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 246 LDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVSYN 304
+ EA ++ EM G +PDVY++N L+ GLC +++ A +++++ M ++G+ + V+YN
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA-LWLLRDMISEGVVANTVTYN 533
Query: 305 TVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGM 364
T+I AF + G+ + A KL M +G LD +T+ LIK R G A L +M
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 365 NLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEA 424
+P I +I+ LC+S + A +MV +G TPD++++N+LINGLC++ R+ +
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 425 MHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
+ ++ ++Q G PD VTF L+ L + + AC L D+ +E GF + + L+++
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 485 IHLQDAANK 493
I Q+ ++
Sbjct: 714 IIPQETLDR 722
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 221/501 (44%), Gaps = 110/501 (21%)
Query: 90 CEVKNFTLINILLD-----NMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFD-- 142
CE F N++L+ N K+A VF+ M+S+ P + T+ +V+ C E D
Sbjct: 178 CE-PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 143 ---------------------------------KAVQAWEHMIENGIKPDNKACAALVVG 169
+A+Q E M G PD + +++G
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 170 LCGDGKVDLAYE-----LTVGAMKGKVEFGVLI--------------------------Y 198
LC +++ A + L G + +G L+ +
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF 356
Query: 199 NALISGFCRTGRIRRAMAIKSFMKWN-GCEPDLVTYNAILNYYCDEVMLDEAEKLVMEME 257
N LI GF GR+ A A+ S M + G PD+ TYN+++ Y E ++ A +++ +M
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 258 SCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQT 316
+ G +P+VYSY L+ G C ++D+AY ++ +M A GL+ + V +N +I AFCK +
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYN-VLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 317 RRAYKLFEGMRRRGIELDV-----------------------------------VTFTIL 341
A ++F M R+G + DV VT+ L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 342 IKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGI 401
I AFLR G A KL+N+M D I Y ++I LC++ E+ A +F M+ G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 402 TPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACR 461
P IS N LINGLC+S V EA+ +EM +RG+ PD VTF LI GL + ++E
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 462 LWDQMMEKGFTLDKTVSAALI 482
++ ++ +G D L+
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLM 676
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 165/365 (45%), Gaps = 38/365 (10%)
Query: 153 ENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIR 212
E K N LV G C ++ Y++ + K+ + + ++ FC I
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDM----LSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 213 RAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLL 272
A+++ M +GC P+ V Y +++ ++EA +L+ EM G PD ++N ++
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 273 KGLCNSNQLDKAYMFMVKKMEAKGL-RDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRR-- 329
GLC +++++A MV +M +G D ++Y ++ CK G+ A LF + +
Sbjct: 295 LGLCKFDRINEAAK-MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 330 ------------------------------GIELDVVTFTILIKAFLREGSSAMAEKLLN 359
GI DV T+ LI + +EG +A ++L+
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 360 QMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSS 419
MR P+ YT ++D CK +I AY V +M G+ P+ + +N LI+ CK
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 420 RVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSA 479
R+ EA+ ++ EM +G PD TF LI GL + +++ A L M+ +G +
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 480 ALIEA 484
LI A
Sbjct: 534 TLINA 538
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%)
Query: 302 SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM 361
SYN V+E G + A +F M R I + TF +++KAF A LL M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 362 RGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRV 421
P+ ++Y T+I L K + A + +M G PD ++N +I GLCK R+
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 422 SEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAAL 481
+EA + M IRG PD++T+ L+ GL + +++ A L+ ++ + + T+
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF 363
Query: 482 IEAIHLQDA 490
+ L DA
Sbjct: 364 VTHGRLDDA 372
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 239/507 (47%), Gaps = 66/507 (13%)
Query: 46 DYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNM 105
++N+ + + + +FDLV ++M LG S +TY+ I+ C +L LL M
Sbjct: 12 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 106 DKL------------------------ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEF 141
KL A+ + +MV G PD +T+T +I GL +
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 142 DKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNAL 201
+AV + M++ G +P+ +V GLC G +DLA+ L K+E V+I+N +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 202 ISGFCRTGRIRRAM-----------------------AIKSFMKWNGCE----------- 227
I C+ + A+ + S+ +W+
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 228 -PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA-- 284
P+LVT+NA+++ + E EAEKL +M I+PD+++YN L+ G C ++LDKA
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 285 -YMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIK 343
+ FMV K D +YNT+I+ FCK + +LF M RG+ D VT+T LI+
Sbjct: 312 MFEFMVSK---DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 344 AFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITP 403
+G A+K+ QM + PD + Y+ ++D LC + ++ A VF M + I
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 404 DVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLW 463
D+ Y +I G+CK+ +V + L+ + ++G P+ VT+ +I GL ++ L+ A L
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 464 DQMMEKGFTLDKTVSAALIEAIHLQDA 490
+M E G D LI A HL+D
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRA-HLRDG 514
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 189/406 (46%), Gaps = 37/406 (9%)
Query: 116 MVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGK 175
MV P + + ++ + K K+FD + E M GI + L+ C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 176 VDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRI------------------------ 211
+ LA L MK E ++ ++L++G+C RI
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 212 -----------RRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCG 260
A+A+ M GC+P+LVTY ++N C +D A L+ +ME+
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 261 IEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDK-VSYNTVIEAFCKGGQTRRA 319
IE DV +N ++ LC +D A + + K+ME KG+R V+Y+++I C G+ A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDA-LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 320 YKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDC 379
+L M + I ++VTF LI AF++EG AEKL + M ++ PD Y ++I+
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 380 LCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPD 439
C + A +F MV + PD+ +YN LI G CKS RV + L+ EM RG D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 440 EVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
VT+ LI GL + + A +++ QM+ G D + L++ +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 198 YNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEME 257
+N L+S + + +++ M+ G +L TYN ++N +C + A L+ +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 258 SCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQT 316
G EP + + + LL G C+ ++ A + +V +M G R D +++ T+I +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDA-VALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 317 RRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTI 376
A L + M +RG + ++VT+ +++ + G +A LLN+M + D +++ TI
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 377 IDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGA 436
ID LCK R + A +F +M +GI P+V++Y++LI+ LC R S+A L +M +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 437 HPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDAANK 493
+P+ VTF LI V+E K A +L D M+++ D +LI + D +K
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 175/378 (46%), Gaps = 12/378 (3%)
Query: 1 MIQKLGAQRLI-YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
M+Q+ L+ Y ++ L K G ID A ++ ++M + + +N I L ++
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
D +++M G TYS IS LC ++ + LL + M+ K
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD-----------MIEK 249
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
P++VT+ +ID K +F +A + + MI+ I PD +L+ G C ++D A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
++ + + YN LI GFC++ R+ + M G D VTY ++
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRD 299
+ D A+K+ +M S G+ PD+ +Y+ LL GLCN+ +L+KA +++ D
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 300 KVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLN 359
Y T+IE CK G+ + LF + +G++ +VVT+ +I + A LL
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 360 QMRGMNLSPDRILYTTII 377
+M+ PD Y T+I
Sbjct: 490 KMKEDGPLPDSGTYNTLI 507
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 11/318 (3%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y + IS L G A + +M + + +N I ++ +F + +
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M FTY+ I+G C + D +DK A ++F MVSK PD+ TY
Sbjct: 281 MIKRSIDPDIFTYNSLINGFC----------MHDRLDK-AKQMFEFMVSKDCFPDLDTYN 329
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+I G CK+K + + + M G+ D L+ GL DG D A ++ +
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
V ++ Y+ L+ G C G++ +A+ + +M+ + + D+ Y ++ C +D+
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEA 309
L + G++P+V +YN ++ GLC+ L +AY + K E L D +YNT+I A
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 310 FCKGGQTRRAYKLFEGMR 327
+ G + +L MR
Sbjct: 510 HLRDGDKAASAELIREMR 527
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 25/311 (8%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + + A I VK G +A + D+M + + YN I H R D
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNF-----------------------TLIN 99
+ ++ M TY+ I G C+ K TLI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 100 ILLDNMD-KLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKP 158
L + D A +VF +MVS G PD++TY+I++DGLC + +KA++ +++M ++ IK
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 159 DNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIK 218
D ++ G+C GKVD ++L V+ V+ YN +ISG C ++ A A+
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 219 SFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
MK +G PD TYN ++ + + + +L+ EM SC D + L+ + +
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHD 547
Query: 279 NQLDKAYMFMV 289
+LDK+++ M+
Sbjct: 548 GRLDKSFLDML 558
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 292 MEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSS 351
++++ L +N ++ A K + L E M+R GI ++ T+ ILI F R
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 352 AMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNAL 411
++A LL +M + P + +++++ C + I A + MVE G PD I++ L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 412 INGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGF 471
I+GL ++ SEA+ L + M RG P+ VT+ +++ GL + ++LA L ++M
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 472 TLDKTVSAALIEAI----HLQDAAN 492
D + +I+++ H+ DA N
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALN 206
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%)
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
P + ++ + K ++ + M GI+ ++ +YN LIN C+ S++S A+ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHL 487
+M G P VT L+ G K++ A L DQM+E G+ D LI + L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 488 QDAANK 493
+ A++
Sbjct: 128 HNKASE 133
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 251/541 (46%), Gaps = 66/541 (12%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
YR + N + +D A+ +F M +S +++N+ + + + +FD+V ++M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL----------------------- 108
L +TY+ I+ C +L LL M KL
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 109 -ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
A+ + +MV G PD +T+T +I GL + +AV + M++ G +P+ +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 168 VGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAM------------ 215
GLC G DLA L K+E V+I+N +I C+ + A+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 216 -----------AIKSFMKWNGCE------------PDLVTYNAILNYYCDEVMLDEAEKL 252
+ S+ +W+ P+LVT+NA+++ + E EAEKL
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 253 VMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA---YMFMVKKMEAKGLRDKVSYNTVIEA 309
+M I+PD+++YN L+ G C ++LDKA + FMV K D V+YNT+I+
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK---DCFPDVVTYNTLIKG 409
Query: 310 FCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPD 369
FCK + +LF M RG+ D VT+T LI+ +G A+K+ QM + PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 370 RILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYE 429
+ Y+ ++D LC + ++ A VF M + I D+ Y +I G+CK+ +V + L+
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQD 489
+ ++G P+ VT+ +I GL ++ L+ A L +M E G + LI A HL+D
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA-HLRD 588
Query: 490 A 490
Sbjct: 589 G 589
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 186/384 (48%), Gaps = 18/384 (4%)
Query: 112 VFHKMVSKGREPDVVTYTIVIDGLCK-AKEFDKAVQAWEHMIENGIKPDNKACAALVVGL 170
+ H+ + P + +I + G+C + F + ++ NG+
Sbjct: 16 IVHRNLQGKGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLH------------- 62
Query: 171 CGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDL 230
D K+D A L G +K + ++ +N L+S + + +++ M+ L
Sbjct: 63 --DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 231 VTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVK 290
TYN ++N +C + A L+ +M G EP + + + LL G C+ ++ A + +V
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA-VALVD 179
Query: 291 KMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREG 349
+M G R D +++ T+I + A L + M +RG + ++VT+ +++ + G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 350 SSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYN 409
+ +A LLN+M + D +++ TIID LCK R + A +F +M +GI P+V++Y+
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 410 ALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEK 469
+LI+ LC R S+A L +M + +P+ VTF LI V+E K A +L+D M+++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 470 GFTLDKTVSAALIEAIHLQDAANK 493
D +L+ + D +K
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDK 383
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 11/318 (3%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y + IS L G A + +M + + +N I ++ +F + Y
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M FTY+ ++G C + D +DK A ++F MVSK PDVVTY
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFC----------MHDRLDK-AKQMFEFMVSKDCFPDVVTYN 404
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+I G CK+K + + + M G+ D L+ GL DG D A ++ +
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
V ++ Y+ L+ G C G++ +A+ + +M+ + + D+ Y ++ C +D+
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEA 309
L + G++P+V +YN ++ GLC+ L +AY + K E L + +YNT+I A
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 310 FCKGGQTRRAYKLFEGMR 327
+ G + +L MR
Sbjct: 585 HLRDGDKAASAELIREMR 602
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 145/311 (46%), Gaps = 25/311 (8%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + + A I VK G +A ++D+M + + YN + H R D
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNF-----------------------TLIN 99
+ ++ M TY+ I G C+ K TLI
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 100 ILLDNMD-KLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKP 158
L + D A +VF +MVS G PD++TY+I++DGLC + +KA++ +++M ++ IK
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 159 DNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIK 218
D ++ G+C GKVD ++L V+ V+ YN +ISG C ++ A A+
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 219 SFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
MK +G P+ TYN ++ + + + +L+ EM SC D + L+ + +
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHD 622
Query: 279 NQLDKAYMFMV 289
+LDK+++ M+
Sbjct: 623 GRLDKSFLDML 633
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 236/462 (51%), Gaps = 17/462 (3%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
YR + N ++ +D ++ +F M Q D++R + + + ++D+V + ++QM
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
LG T + ++ C +L AL KM+ G EP +VT+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSL-----------ALSFLGKMIKLGHEPSIVTFGSL 157
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
++G C+ A+ ++ M+ G KP+ ++ GLC +VD A +L K +
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
V+ YN+LISG C +GR A + S M PD+ T+NA+++ E + EAE+
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA---YMFMVKKMEAKGLRDKVSYNTVIE 308
EM ++PD+ +Y+ L+ GLC ++LD+A + FMV K D V+Y+ +I
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK---GCFPDVVTYSILIN 334
Query: 309 AFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSP 368
+CK + KLF M +RG+ + VT+TILI+ + R G +AE++ +M + P
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 369 DRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLY 428
+ I Y ++ LC + +I A + DM + G+ D+++YN +I G+CK+ V++A +Y
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 429 EEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKG 470
+ +G PD T+ ++ GL ++ A L+ +M E G
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 190/377 (50%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
+L++F MV P + ++ ++ + K K++D + WE M GI + C L+
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
C ++ LA +K E ++ + +L++GFCR R+ A+ + M G +P
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM 288
++V YN I++ C +D A L+ ME GI PDV +YN L+ GLC+S + A +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 289 VKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLRE 348
+ + D ++N +I+A K G+ A + +E M RR ++ D+VT+++LI
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 349 GSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISY 408
AE++ M PD + Y+ +I+ CKS+++ +F +M ++G+ + ++Y
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 409 NALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMME 468
LI G C++ +++ A ++ M G HP+ +T+ +L+ GL K+E A + M +
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 469 KGFTLDKTVSAALIEAI 485
G D +I +
Sbjct: 425 NGMDADIVTYNIIIRGM 441
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 11/271 (4%)
Query: 5 LGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQ 64
+G + Y + IS L +G A + MT+ +N I ++ R +
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 65 FYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPD 124
+Y++M TYS I GLC + +D+ A E+F MVSKG PD
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLC----------MYSRLDE-AEEMFGFMVSKGCFPD 325
Query: 125 VVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTV 184
VVTY+I+I+G CK+K+ + ++ + M + G+ + L+ G C GK+++A E+
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 185 GAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEV 244
+ V ++ YN L+ G C G+I +A+ I + M+ NG + D+VTYN I+ C
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 245 MLDEAEKLVMEMESCGIEPDVYSYNQLLKGL 275
+ +A + + G+ PD+++Y ++ GL
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 149/323 (46%), Gaps = 13/323 (4%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+IY I L K+ +D A+ + + M + + YN I L R+
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M FT++ I + + A E + +M+ + +PD+VTY+
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVS-----------EAEEFYEEMIRRSLDPDIVTYS 295
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
++I GLC D+A + + M+ G PD + L+ G C KV+ +L +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
V + Y LI G+CR G++ A I M + G P+++TYN +L+ CD +++A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVSYNTVIE 308
++ +M+ G++ D+ +YN +++G+C + ++ A+ + +GL D +Y T++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC-SLNCQGLMPDIWTYTTMML 474
Query: 309 AFCKGGQTRRAYKLFEGMRRRGI 331
K G R A LF M+ GI
Sbjct: 475 GLYKKGLRREADALFRKMKEDGI 497
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 268 YNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMR 327
Y ++L+ +LD + ++ + L ++ ++ A K + L+E M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 328 RRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIG 387
GI ++ T IL+ F R ++A L +M + P + + ++++ C+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 388 TAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLI 447
A +F MV G P+V+ YN +I+GLCKS +V A+ L M+ G PD VT+ LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 448 GGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
GL + A R+ M ++ D ALI+A
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 247/544 (45%), Gaps = 82/544 (15%)
Query: 12 YRAQISNLVKAGL-IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
YR ++S V L +D AV +F EM QS +++N+ + + + ++FDLV ++M
Sbjct: 47 YREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM 106
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTI 130
L S ++Y+ I+ C LAL V KM+ G EPD+VT +
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLP-----------LALAVLGKMMKLGYEPDIVTLSS 155
Query: 131 VIDGLCKAKEFDKAV-----------------------------QAWE------HMIENG 155
+++G C K +AV +A E M+ G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 156 IKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAM 215
+PD +V GLC G +DLA L KGK+E V+IY +I C + A+
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 216 AIKSFMKWNGCEPDLVTYNAILNYYCD--------------------------------- 242
+ + M G P++VTYN+++ C+
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 243 --EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDK 300
E L EAEKL EM I+PD+++Y+ L+ G C ++LD+A + +
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 301 VSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQ 360
V+YNT+I+ FCK + +LF M +RG+ + VT+ LI+ + G MA+K+ +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 361 MRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSR 420
M + PD I Y+ ++D LCK ++ A VF + + + PD+ +YN +I G+CK+ +
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 421 VSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAA 480
V + L+ + ++G P+ + + +I G ++ E A L+ +M E G +
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 481 LIEA 484
LI A
Sbjct: 576 LIRA 579
Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 227/463 (49%), Gaps = 13/463 (2%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
I +AV + D+M + ++ +N I L H++ +M G FTY
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
++GLC+ + LAL + KM E DVV YT +ID LC K + A
Sbjct: 226 VVNGLCKRGDI-----------DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
+ + M GI+P+ +L+ LC G+ A L ++ K+ V+ ++ALI
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
F + G++ A + M +PD+ TY++++N +C LDEA+ + M S P+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVSYNTVIEAFCKGGQTRRAYKLF 323
V +YN L+KG C + ++++ M + ++M +GL + V+YNT+I+ + G A K+F
Sbjct: 395 VVTYNTLIKGFCKAKRVEEG-MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
+ M G+ D++T++IL+ + G A + ++ + PD Y +I+ +CK+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
++ + +F + +G+ P+VI Y +I+G C+ EA L+ EM+ G P+ T+
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 444 KLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
LI +++ + L +M GF D + + +I +H
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 2/388 (0%)
Query: 99 NILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKP 158
N+LLD A+++F +MV P +V + ++ + K +FD + E M I
Sbjct: 54 NVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY 113
Query: 159 DNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIK 218
D + L+ C ++ LA + MK E ++ ++L++G+C RI A+A+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 219 SFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
M +P+ VT+N +++ EA L+ M + G +PD+++Y ++ GLC
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 279 NQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVT 337
+D A + ++KKME + D V Y T+I+A C A LF M +GI +VVT
Sbjct: 234 GDIDLA-LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 338 FTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMV 397
+ LI+ G + A +LL+ M ++P+ + ++ +ID K ++ A ++ +M+
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 398 EQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLE 457
++ I PD+ +Y++LING C R+ EA H++E M + P+ VT+ LI G + K++E
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 458 LACRLWDQMMEKGFTLDKTVSAALIEAI 485
L+ +M ++G + LI+ +
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGL 440
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 161/317 (50%)
Query: 173 DGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVT 232
D K+D A +L ++ + ++ +N L+S + + +++ M+ DL +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 233 YNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 292
YN ++N +C L A ++ +M G EPD+ + + LL G C+ ++ +A + +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 293 EAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSA 352
+ + V++NT+I + A L + M RG + D+ T+ ++ + G
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 353 MAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALI 412
+A LL +M + D ++YTTIID LC + + A +F +M +GI P+V++YN+LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 413 NGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFT 472
LC R S+A L +M R +P+ VTF LI V+E KL A +L+D+M+++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 473 LDKTVSAALIEAIHLQD 489
D ++LI + D
Sbjct: 358 PDIFTYSSLINGFCMHD 374
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 173/382 (45%), Gaps = 13/382 (3%)
Query: 4 KLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLV 63
K+ A +IY I L ++ A+++F EM R + YN I L + R+
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 64 QFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREP 123
M + T+S I VK L+ A +++ +M+ + +P
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAF--VKEGKLVE---------AEKLYDEMIKRSIDP 358
Query: 124 DVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELT 183
D+ TY+ +I+G C D+A +E MI P+ L+ G C +V+ EL
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 184 VGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDE 243
+ + + YN LI G + G A I M +G PD++TY+ +L+ C
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 244 VMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVS- 302
L++A + ++ +EPD+Y+YN +++G+C + +++ + + KG++ V
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVII 537
Query: 303 YNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 362
Y T+I FC+ G A LF M+ G + T+ LI+A LR+G A + +L+ +MR
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 363 GMNLSPDRILYTTIIDCLCKSR 384
D + +I+ L R
Sbjct: 598 SCGFVGDASTISMVINMLHDGR 619
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 149/311 (47%), Gaps = 25/311 (8%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + + A I VK G + +A ++DEM + + Y+ I H R D
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNF-----------------------TLIN 99
+ ++ M TY+ I G C+ K TLI
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 100 ILLDNMD-KLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKP 158
L D +A ++F KMVS G PD++TY+I++DGLCK + +KA+ +E++ ++ ++P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 159 DNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIK 218
D ++ G+C GKV+ ++L V+ V+IY +ISGFCR G A A+
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 219 SFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
MK +G P+ TYN ++ + + +L+ EM SCG D + + ++ L +
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HD 617
Query: 279 NQLDKAYMFMV 289
+L+K+Y+ M+
Sbjct: 618 GRLEKSYLEML 628
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 6/183 (3%)
Query: 314 GQTRRAYKLFEGMRRRGIELDVVTFTI---LIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
Q R+A LF RG+ ++ L + L + A L +M P
Sbjct: 24 AQLRKASPLFS---LRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSI 80
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEE 430
+ + ++ + K + + M I+ D+ SYN LIN C+ S++ A+ + +
Sbjct: 81 VEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140
Query: 431 MQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDA 490
M G PD VT L+ G K++ A L DQM + + LI + L +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 491 ANK 493
A++
Sbjct: 201 ASE 203
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/498 (29%), Positives = 227/498 (45%), Gaps = 44/498 (8%)
Query: 20 VKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTP 79
V+ GLI+ A +VFDEM+ S Y + R + + M GF
Sbjct: 193 VELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDN 252
Query: 80 FTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAK 139
T + ++ LCE + + A+ F KM+ G +P+++ +T +IDGLCK
Sbjct: 253 ATCTLILTALCE-----------NGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKG 301
Query: 140 EFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV-EFGVLIY 198
+A + E M+ NG KP+ AL+ GLC G + A+ L + ++ + V Y
Sbjct: 302 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY 361
Query: 199 NALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMES 258
++I G+C+ ++ RA + S MK G P++ TY ++N +C A +L+ M
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 421
Query: 259 CGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRR 318
G P++Y+YN + LC ++ +AY + K D V+Y +I+ CK +
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 319 AYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIID 378
A F M + G E D+ ILI AF R+ +E+L + + L P + YT++I
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 379 CLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHP 438
C CK +I A F +M G PD +Y +LI+GLCK S V EA LYE M RG P
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 439 DEV--------------------------------TFKLLIGGLVQEKKLELACRLWDQM 466
EV T + L+ L EKK+ +A + ++
Sbjct: 602 PEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKL 661
Query: 467 MEKGFTLDKTVSAALIEA 484
+EK + D+ AA A
Sbjct: 662 LEKDSSADRVTLAAFTTA 679
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 190/398 (47%), Gaps = 14/398 (3%)
Query: 90 CEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWE 149
C ++NF+ I L + A+ + M ++G P +T V++ + + A ++
Sbjct: 152 CMLRNFSEIGRLNE-----AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 206
Query: 150 HMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNA----LISGF 205
M G+ PD+ + +V+G DGK+ A + G ++ G + NA +++
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW----LTGMIQRGFIPDNATCTLILTAL 262
Query: 206 CRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDV 265
C G + RA+ M G +P+L+ + ++++ C + + +A +++ EM G +P+V
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 266 YSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVIEAFCKGGQTRRAYKLFE 324
Y++ L+ GLC +KA+ +K + + + V +Y ++I +CK + RA LF
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 382
Query: 325 GMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSR 384
M+ +G+ +V T+T LI + GS A +L+N M P+ Y ID LCK
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 385 EIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFK 444
AY + G+ D ++Y LI CK + +++A+ + M G D
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Query: 445 LLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI 482
+LI ++KK++ + RL+ ++ G K ++I
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 1/290 (0%)
Query: 197 IYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEM 256
+ ++ F GR+ A+ + M+ G P +T N +L + +++ AE + EM
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 257 ESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQT 316
G+ PD SY ++ G ++ +A ++ ++ + D + ++ A C+ G
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 317 RRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTI 376
RA F M G + +++ FT LI ++GS A ++L +M P+ +T +
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 377 IDCLCKSREIGTAYGVFLDMVEQGI-TPDVISYNALINGLCKSSRVSEAMHLYEEMQIRG 435
ID LCK A+ +FL +V P+V +Y ++I G CK +++ A L+ M+ +G
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 436 AHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
P+ T+ LI G + A L + M ++GF + A I+++
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 156/378 (41%), Gaps = 65/378 (17%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSID-YNRFIGVLIRHSRFDLVQFYYQQM 70
+ A I L K G ++A +F ++ +S+ ++ Y IG + + + + + +M
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 384
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNF----TLINILLDN------------MDKL------ 108
G TY+ I+G C+ +F L+N++ D +D L
Sbjct: 385 KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRA 444
Query: 109 --ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAAL 166
A E+ +K S G E D VTYTI+I CK + ++A+ + M + G + D + L
Sbjct: 445 PEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNIL 504
Query: 167 VVGLCGDGKVDLAYELTVGAMKGKVEFGVL----IYNALISGFCRTGRIRRAMAIKSFMK 222
+ C K+ + L + V G++ Y ++IS +C+ G I A+ MK
Sbjct: 505 IAAFCRQKKMKESERL----FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 560
Query: 223 WNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD-------VYSY------- 268
+GC PD TY ++++ C + M+DEA KL M G+ P Y Y
Sbjct: 561 RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSA 620
Query: 269 ------------------NQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAF 310
L++ LC+ ++ A +F K +E D+V+ A
Sbjct: 621 NAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 680
Query: 311 CKGGQTRRAYKLFEGMRR 328
+ G+ L E + R
Sbjct: 681 SESGKNNLVTDLTERISR 698
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 64/179 (35%), Gaps = 16/179 (8%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y + IS K G ID A+ F M + C S Y I L + S D Y+ M
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 595
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDK-LALEVFHKMVSKGREPDVVTYTI 130
G S T C+ + ILL+ +DK L + +V K
Sbjct: 596 DRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRK----------- 644
Query: 131 VIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
LC K+ A ++ ++E D AA GK +L +LT +G
Sbjct: 645 ----LCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISRG 699
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 237/480 (49%), Gaps = 11/480 (2%)
Query: 6 GAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQF 65
G ++ YR ++ + + D AV +F EMT+S R ID++R V+ R ++DLV
Sbjct: 34 GKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD 93
Query: 66 YYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDV 125
+QM G + +T S I+ C + +L A K++ G EPD
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSL-----------AFSAMGKIIKLGYEPDT 142
Query: 126 VTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVG 185
VT++ +I+GLC +A++ + M+E G KP ALV GLC +GKV A L
Sbjct: 143 VTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 186 AMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVM 245
++ + + Y ++ C++G+ AM + M+ + D V Y+ I++ C +
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 246 LDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNT 305
LD A L EME G + D+ Y L++G C + + D + ++ K D V+++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 306 VIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMN 365
+I+ F K G+ R A +L + M +RGI D VT+T LI F +E A +L+ M
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 366 LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAM 425
P+ + +I+ CK+ I +F M +G+ D ++YN LI G C+ ++ A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 426 HLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
L++EM R PD V++K+L+ GL + E A +++++ + LD + +I +
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 238/487 (48%), Gaps = 15/487 (3%)
Query: 2 IQKLG--AQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
I KLG + + I+ L G + +A+ + D M + + I N + L + +
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
+M GF TY + +C+ LA+E+ KM +
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK-----------SGQTALAMELLRKMEER 241
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
+ D V Y+I+IDGLCK D A + M G K D L+ G C G+ D
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
+L +K K+ V+ ++ALI F + G++R A + M G PD VTY ++++
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LR 298
+C E LD+A ++ M S G P++ ++N L+ G C +N +D + + +KM +G +
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG-LELFRKMSLRGVVA 420
Query: 299 DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLL 358
D V+YNT+I+ FC+ G+ A +LF+ M R + D+V++ IL+ G A ++
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 359 NQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKS 418
++ + D +Y II +C + ++ A+ +F + +G+ PDV +YN +I GLCK
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Query: 419 SRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVS 478
+SEA L+ +M+ G P+ T+ +LI + E + +L +++ GF++D +
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTV 600
Query: 479 AALIEAI 485
+++ +
Sbjct: 601 KMVVDML 607
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 178/396 (44%), Gaps = 17/396 (4%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + Y I L K G +D A ++F+EM + I Y I R+D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
+ M + +S I C VK L + A E+ +M+ +G
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALID--CFVKEGKL---------REAEELHKEMIQRGIS 349
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
PD VTYT +IDG CK + DKA + M+ G P+ + L+ G C +D EL
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
V + YN LI GFC G++ A + M PD+V+Y +L+ CD
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV- 301
++A ++ ++E +E D+ YN ++ G+CN++++D A+ + KG++ V
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS-LPLKGVKPDVK 528
Query: 302 SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM 361
+YN +I CK G A LF M G + T+ ILI+A L EG + + KL+ ++
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 362 RGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMV 397
+ S D ++D L R FLDM+
Sbjct: 589 KRCGFSVDASTVKMVVDMLSDGR----LKKSFLDML 620
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 155/327 (47%), Gaps = 4/327 (1%)
Query: 167 VVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGC 226
+V + D VDL E+T + + ++ ++ L S RT + + + M+ G
Sbjct: 48 IVDIKEDDAVDLFQEMT----RSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI 103
Query: 227 EPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYM 286
+L T + ++N C L A + ++ G EPD +++ L+ GLC ++ +A
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 287 FMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL 346
+ + +E ++ N ++ C G+ A L + M G + + VT+ ++K
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 347 REGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVI 406
+ G +A+A +LL +M + D + Y+ IID LCK + A+ +F +M +G D+I
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 407 SYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQM 466
Y LI G C + R + L +M R PD V F LI V+E KL A L +M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 467 MEKGFTLDKTVSAALIEAIHLQDAANK 493
+++G + D +LI+ ++ +K
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDK 370
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 198/383 (51%), Gaps = 4/383 (1%)
Query: 108 LALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
A VF +M+ P+V TY I+I G C A D A+ ++ M G P+ L+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 168 VGLCGDGKVDLAYELTVG-AMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGC 226
G C K+D ++L A+KG +E ++ YN +I+G CR GR++ + + M G
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKG-LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 306
Query: 227 EPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYM 286
D VTYN ++ YC E +A + EM G+ P V +Y L+ +C + +++A
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 287 FMVKKMEAKGL-RDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAF 345
F+ +M +GL ++ +Y T+++ F + G AY++ M G VVT+ LI
Sbjct: 367 FL-DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 346 LREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDV 405
G A +L M+ LSPD + Y+T++ C+S ++ A V +MVE+GI PD
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 406 ISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQ 465
I+Y++LI G C+ R EA LYEEM G PDE T+ LI E LE A +L ++
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 466 MMEKGFTLDKTVSAALIEAIHLQ 488
M+EKG D + LI ++ Q
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQ 568
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 206/395 (52%), Gaps = 8/395 (2%)
Query: 92 VKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAK-EFDKAVQAWEH 150
VK+++ ++++ DK AL + H + G P V++Y V+D ++K A ++
Sbjct: 141 VKSYSRLSLI----DK-ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 151 MIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGR 210
M+E+ + P+ L+ G C G +D+A L V+ YN LI G+C+ +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 211 IRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQ 270
I + M G EP+L++YN ++N C E + E ++ EM G D +YN
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 271 LLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVIEAFCKGGQTRRAYKLFEGMRRR 329
L+KG C +A + M +M GL V +Y ++I + CK G RA + + MR R
Sbjct: 316 LIKGYCKEGNFHQA-LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 330 GIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTA 389
G+ + T+T L+ F ++G A ++L +M SP + Y +I+ C + ++ A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 390 YGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGG 449
V DM E+G++PDV+SY+ +++G C+S V EA+ + EM +G PD +T+ LI G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 450 LVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
++++ + AC L+++M+ G D+ ALI A
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 227/455 (49%), Gaps = 16/455 (3%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR-FDLVQFYYQQ 69
++ + + + LID+A+ + + YN + IR R + +++
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M S FTY+ I G C N+D +AL +F KM +KG P+VVTY
Sbjct: 196 MLESQVSPNVFTYNILIRGFC----------FAGNID-VALTLFDKMETKGCLPNVVTYN 244
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKV-DLAYELTVGAMK 188
+IDG CK ++ D + M G++P+ + ++ GLC +G++ ++++ LT +
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 189 GKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDE 248
G + YN LI G+C+ G +A+ + + M +G P ++TY ++++ C ++
Sbjct: 305 G-YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 249 AEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVI 307
A + + +M G+ P+ +Y L+ G +++AY ++++M G V +YN +I
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR-VLREMNDNGFSPSVVTYNALI 422
Query: 308 EAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLS 367
C G+ A + E M+ +G+ DVV+++ ++ F R A ++ +M +
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
PD I Y+++I C+ R A ++ +M+ G+ PD +Y ALIN C + +A+ L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRL 462
+ EM +G PD VT+ +LI GL ++ + A RL
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 234/498 (46%), Gaps = 28/498 (5%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I AG ID A+ +FD+M C + YN I + + D + M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G +Y+ I+GLC ++ +L M++ +G D VTY +
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR-----------RGYSLDEVTYNTL 316
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
I G CK F +A+ M+ +G+ P +L+ +C G ++ A E +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
Y L+ GF + G + A + M NG P +VTYNA++N +C +++A
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAF 310
++ +M+ G+ PDV SY+ +L G C S +D+A + + ++M KG++ D ++Y+++I+ F
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA-LRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
C+ +T+ A L+E M R G+ D T+T LI A+ EG A +L N+M + PD
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYN---------------ALINGL 415
+ Y+ +I+ L K A + L + + P ++Y+ +LI G
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 416 CKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDK 475
C ++EA ++E M + PD + ++I G + + A L+ +M++ GF L
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 675
Query: 476 TVSAALIEAIHLQDAANK 493
AL++A+H + N+
Sbjct: 676 VTVIALVKALHKEGKVNE 693
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 190/446 (42%), Gaps = 44/446 (9%)
Query: 2 IQKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFD 61
++ L + Y I+ L + G + + V EM + + + YN I + F
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 62 LVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMD--------------- 106
+ +M G + + TY+ I +C+ N LD M
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 107 ---------KLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIK 157
A V +M G P VVTY +I+G C + + A+ E M E G+
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 158 PDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAI 217
PD + + ++ G C VD A + ++ ++ + Y++LI GFC R + A +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 218 KSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCN 277
M G PD TY A++N YC E L++A +L EM G+ PDV +Y+ L+ GL
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 278 SNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVT 337
++ +A ++K + + V+Y+T+IE C IE V
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CS-----------------NIEFKSV- 608
Query: 338 FTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMV 397
LIK F +G A+++ M G N PD Y +I C++ +I AY ++ +MV
Sbjct: 609 -VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 398 EQGITPDVISYNALINGLCKSSRVSE 423
+ G ++ AL+ L K +V+E
Sbjct: 668 KSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 187/419 (44%), Gaps = 28/419 (6%)
Query: 5 LGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQ 64
L + Y + I ++ KAG +++A+ D+M Y + + +
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 65 FYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPD 124
++M+ GFS + TY+ I+G C + M+ A+ V M KG PD
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHC----------VTGKMED-AIAVLEDMKEKGLSPD 449
Query: 125 VVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTV 184
VV+Y+ V+ G C++ + D+A++ M+E GIKPD ++L+ G C + A +L
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 185 GAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEV 244
++ + Y ALI+ +C G + +A+ + + M G PD+VTY+ ++N +
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 245 MLDEAEKLVMEMESCGIEPDVYSYN---------------QLLKGLCNSNQLDKAYMFMV 289
EA++L++++ P +Y+ L+KG C + +A
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 290 KKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREG 349
+ D +YN +I C+ G R+AY L++ M + G L VT L+KA +EG
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Query: 350 S-SAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 407
+ + +++ +R LS +++ + + V +M + G P+ IS
Sbjct: 690 KVNELNSVIVHVLRSCELSEAE-QAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 39/307 (12%)
Query: 214 AMAIKSFMK-WNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQ-- 270
++ KS + ++ C ++ ++ Y ++D+A +V ++ G P V SYN
Sbjct: 117 SLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL 176
Query: 271 ----------------------------------LLKGLCNSNQLDKAYMFMVKKMEAKG 296
L++G C + +D A + + KME KG
Sbjct: 177 DATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA-LTLFDKMETKG 235
Query: 297 -LRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAE 355
L + V+YNT+I+ +CK + +KL M +G+E +++++ ++I REG
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS 295
Query: 356 KLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGL 415
+L +M S D + Y T+I CK A + +M+ G+TP VI+Y +LI+ +
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 416 CKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDK 475
CK+ ++ AM ++M++RG P+E T+ L+ G Q+ + A R+ +M + GF+
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 476 TVSAALI 482
ALI
Sbjct: 416 VTYNALI 422
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 226/467 (48%), Gaps = 56/467 (11%)
Query: 8 QRLIYRAQISNLVKAGLID----QAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLV 63
+ L YR ++ ++GL+D A+ +F +M S ID++R + + ++DLV
Sbjct: 52 RNLSYRERL----RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 107
Query: 64 QFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREP 123
+QM G + +T S I+ C + LA K++ G EP
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLC-----------LAFSAMGKIIKLGYEP 156
Query: 124 DVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELT 183
+ +T++ +I+GLC +A++ + M+E G KPD LV GL
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL------------- 203
Query: 184 VGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDE 243
C +G+ AM + M GC+P+ VTY +LN C
Sbjct: 204 ----------------------CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 244 VMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDK-VS 302
A +L+ +ME I+ D Y+ ++ GLC LD A+ + +ME KG+ ++
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN-LFNEMEMKGITTNIIT 300
Query: 303 YNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 362
YN +I FC G+ KL M +R I +VVTF++LI +F++EG AE+L +M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 363 GMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVS 422
++PD I YT++ID CK + A + MV +G P++ ++N LING CK++R+
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 423 EAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEK 469
+ + L+ +M +RG D VT+ LI G + KL +A L+ +M+ +
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 211 bits (538), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 239/487 (49%), Gaps = 15/487 (3%)
Query: 2 IQKLG--AQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
I KLG + + I+ L G + +A+ + D M + + I N + L +
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
+M G TY ++ +C+ LA+E+ KM +
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK-----------SGQTALAMELLRKMEER 257
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
+ D V Y+I+IDGLCK D A + M GI + L+ G C G+ D
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
+L +K K+ V+ ++ LI F + G++R A + M G PD +TY ++++
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LR 298
+C E LD+A ++V M S G +P++ ++N L+ G C +N++D + + +KM +G +
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG-LELFRKMSLRGVVA 436
Query: 299 DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLL 358
D V+YNT+I+ FC+ G+ A +LF+ M R + ++VT+ IL+ G S A ++
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 359 NQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKS 418
++ + D +Y II +C + ++ A+ +F + +G+ P V +YN +I GLCK
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 419 SRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVS 478
+SEA L+ +M+ G PD T+ +LI + + + +L +++ GF++D +
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTI 616
Query: 479 AALIEAI 485
+I+ +
Sbjct: 617 KMVIDML 623
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 187/411 (45%), Gaps = 30/411 (7%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y ++ + K+G A+ + +M + N ++ ++ Y+ I L +H D + +M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 72 PLGFSLTPFTYSRFISGLCEV-------------------KNFTLINILLDNMDKL---- 108
G + TY+ I G C N ++L+D+ K
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 109 -ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
A E+ +M+ +G PD +TYT +IDG CK DKA Q + M+ G P+ + L+
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 168 VGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCE 227
G C ++D EL V + YN LI GFC G++ A + M
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 228 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 287
P++VTY +L+ CD ++A ++ ++E +E D+ YN ++ G+CN++++D A+
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 288 MVKKMEAKGLRDKV-SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL 346
+ KG++ V +YN +I CK G A LF M G D T+ ILI+A L
Sbjct: 531 FCS-LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 347 REGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMV 397
+G + + KL+ +++ S D +ID L R FLDM+
Sbjct: 590 GDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGR----LKKSFLDML 636
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 162/325 (49%), Gaps = 5/325 (1%)
Query: 173 DGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVT 232
D K D A +L + + V+ ++ L S +T + +A+ M+ G +L T
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 233 YNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 292
+ ++N +C L A + ++ G EP+ +++ L+ GLC ++ +A + + +
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 293 EAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSA 352
E D ++ NT++ C G+ A L + M G + + VT+ ++ + G +A
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 353 MAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALI 412
+A +LL +M N+ D + Y+ IID LCK + A+ +F +M +GIT ++I+YN LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 413 NGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFT 472
G C + R + L +M R +P+ VTF +LI V+E KL A L +M+ +G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 473 LDKTVSAALIEAI----HLQDAANK 493
D +LI+ HL D AN+
Sbjct: 366 PDTITYTSLIDGFCKENHL-DKANQ 389
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%)
Query: 267 SYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGM 326
SY + L+ + D A + ++ L + ++ + A K Q L + M
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 327 RRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREI 386
+GI ++ T +I+I F R +A + ++ + P+ I ++T+I+ LC +
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 387 GTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLL 446
A + MVE G PD+I+ N L+NGLC S + +EAM L ++M G P+ VT+ +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 447 IGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
+ + + + LA L +M E+ LD + +I+ +
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 241/489 (49%), Gaps = 27/489 (5%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
YR ++ N + D A +F EM QS +D+ R + V+ + ++FD+V + Y +M
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
LG S ++++ I C +L LL M KL G P +VT +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL-----------GFRPSIVTLGSL 155
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
++G C+ F +AV + M G P+ ++ GLC + ++ A E+ K +
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
+ YN LISG +GR A + M +P+++ + A+++ + E L EA
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQL-DKAYMFMVKKMEAKG-LRDKVSYNTVIEA 309
L EM + P+V++YN L+ G C L D YMF + M +KG D V+YNT+I
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL--MVSKGCFPDVVTYNTLITG 333
Query: 310 FCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPD 369
FCK + KLF M +G+ D T+ LI + + G +A+K+ N+M +SPD
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 370 RILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYE 429
+ Y ++DCLC + +I A + D+ + + D+I+YN +I GLC++ ++ EA L+
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGF-----TLDKT-------V 477
+ +G PD + + +I GL ++ A +L +M E GF D+T +
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSL 513
Query: 478 SAALIEAIH 486
SA LI+A H
Sbjct: 514 SAELIKAAH 522
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 153/326 (46%), Gaps = 21/326 (6%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+IY I+ L K ++ A+ VF M + R ++ YN I L R+ +
Sbjct: 185 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M ++ I + N LL+ A ++ +M+ + P+V TY
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGN------LLE-----ARNLYKEMIRRSVVPNVFTYN 293
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVD----LAYELTVG 185
+I+G C A ++ M+ G PD L+ G C +V+ L E+T
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 186 AMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVM 245
+ G YN LI G+C+ G++ A + + M G PD+VTYN +L+ C+
Sbjct: 354 GLVGD----AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Query: 246 LDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYN 304
+++A +V +++ ++ D+ +YN +++GLC +++L +A+ + + + KG++ D ++Y
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC-LFRSLTRKGVKPDAIAYI 468
Query: 305 TVIEAFCKGGQTRRAYKLFEGMRRRG 330
T+I C+ G R A KL M+ G
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKEDG 494
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 11/271 (4%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + + A I VK G + +A +++ EM + + YN I H
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
++ + M G TY+ I+G C+ K + +++F +M +G
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV-----------EDGMKLFCEMTYQGLV 356
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
D TY +I G C+A + + A + + M++ G+ PD L+ LC +GK++ A +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
K +++ ++ YN +I G CRT +++ A + + G +PD + Y +++ C
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLK 273
+ + EA+KL M+ G P Y++ L+
Sbjct: 477 KGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%)
Query: 266 YSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEG 325
+ Y + L+ + + D A+ + ++++ + V + V+ K + L+
Sbjct: 45 HHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHK 104
Query: 326 MRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSRE 385
M GI D+ +FTILI F R ++A LL +M + P + ++++ C+
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 386 IGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKL 445
A + M G P+V+ YN +INGLCK+ ++ A+ ++ M+ +G D VT+
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 446 LIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
LI GL + A RL M+++ + ALI+
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 242/524 (46%), Gaps = 64/524 (12%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
+D A+ +F +M +S +++++ + + + ++FDLV +QM LG S +TYS
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 85 FISGLCEVKNFTLINILLDNMDKL------------------------ALEVFHKMVSKG 120
FI+ C +L +L M KL A+ + +MV G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 121 REPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAY 180
+PD VT+T ++ GL + + +AV E M+ G +PD A++ GLC G+ DLA
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 181 ELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYY 240
L KGK+E V+IYN +I G C+ + A + + M+ G +PD+ TYN +++
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 241 CDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQL---DKAYMFMVKKMEAKGL 297
C+ +A +L+ +M I PD+ +N L+ +L +K Y MVK
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC--F 353
Query: 298 RDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKL 357
D V+YNT+I+ FCK + ++F M +RG+ + VT+T LI F + A+ +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 358 LNQMRGMNLSPDR-----------------------------------ILYTTIIDCLCK 382
QM + PD + YTT+I+ LCK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 383 SREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVT 442
+ ++ + +F + +G+ P+V++Y +++G C+ EA L+ EM+ G P+ T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 443 FKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
+ LI +++ + L +M GF D + + +H
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLH 577
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 191/408 (46%), Gaps = 14/408 (3%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ + + L + +AV + + M C+ + Y I L + DL +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M Y+ I GLC+ K+ MD A ++F+KM +KG +PDV TY
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKH----------MDD-AFDLFNKMETKGIKPDVFTYN 289
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+I LC + A + M+E I PD AL+ +GK+ A +L +K
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 190 KVEF-GVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDE 248
K F V+ YN LI GFC+ R+ M + M G + VTY +++ + D
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 249 AEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVI 307
A+ + +M S G+ PD+ +YN LL GLCN+ ++ A + + + M+ + ++ D V+Y T+I
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA-LVVFEYMQKRDMKLDIVTYTTMI 468
Query: 308 EAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLS 367
EA CK G+ + LF + +G++ +VVT+T ++ F R+G A+ L +M+
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGL 415
P+ Y T+I + + + + +M G D ++ + N L
Sbjct: 529 PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 166/348 (47%), Gaps = 5/348 (1%)
Query: 140 EFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYN 199
+ D A+ + M+++ P + L+ + K DL L + + Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 200 ALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESC 259
I+ FCR ++ A+AI M G P +VT N++LN +C + EA LV +M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 260 GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRR 318
G +PD ++ L+ GL N+ +A + +V++M KG + D V+Y VI CK G+
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEA-VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 319 AYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIID 378
A L M + IE DVV + +I + A L N+M + PD Y +I
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 379 CLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAH- 437
CLC A + DM+E+ I PD++ +NALI+ K ++ EA LY+EM ++ H
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM-VKSKHC 352
Query: 438 -PDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
PD V + LI G + K++E ++ +M ++G + LI
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 153/296 (51%)
Query: 173 DGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVT 232
D K+D A L +K + ++ ++ L+S + + +++ M+ G +L T
Sbjct: 53 DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 233 YNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 292
Y+ +NY+C L A ++ +M G P + + N LL G C+ N++ +A + + +
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 293 EAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSA 352
E D V++ T++ + + A L E M +G + D+VT+ +I + G
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 353 MAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALI 412
+A LLN+M + D ++Y TIID LCK + + A+ +F M +GI PDV +YN LI
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 413 NGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMME 468
+ LC R S+A L +M + +PD V F LI V+E KL A +L+D+M++
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 29/355 (8%)
Query: 4 KLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLV 63
K+ A +IY I L K +D A +F++M + YN I L + R+
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS-- 302
Query: 64 QFYYQQMHPLGFSLTPFTYSRFISGLCEVK---NFTLINILLDNMDK-----LALEVFHK 115
SR +S + E + N L+D K A +++ +
Sbjct: 303 -----------------DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 116 MV-SKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDG 174
MV SK PDVV Y +I G CK K ++ ++ + M + G+ + L+ G
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 175 KVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYN 234
D A + + V ++ YN L+ G C G + A+ + +M+ + D+VTY
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 235 AILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEA 294
++ C +++ L + G++P+V +Y ++ G C ++A V+ E
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 295 KGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREG 349
L + +YNT+I A + G + +L + MR G D TF L+ L +G
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDG 579
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 4/215 (1%)
Query: 280 QLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFT 339
+LD A ++++ V ++ ++ A K + L E M+ GI ++ T++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 340 ILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQ 399
I I F R ++A +L +M + P + ++++ C I A + MVE
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 400 GITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELA 459
G PD +++ L++GL + ++ SEA+ L E M ++G PD VT+ +I GL + + +LA
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 460 CRLWDQMMEKGFTLDKTVSAALIEAI----HLQDA 490
L ++M + D + +I+ + H+ DA
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
P + ++ ++ + K + + M GI+ ++ +Y+ IN C+ S++S A+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHL 487
+M G P VT L+ G ++ A L DQM+E G+ D L+ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 488 QDAANK 493
+ A++
Sbjct: 193 HNKASE 198
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 243/489 (49%), Gaps = 25/489 (5%)
Query: 26 DQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRF 85
D A+ +F EM +S +D++RF + R +F+LV + +Q+ G + +T +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 86 ISGLC----------------------EVKNF-TLIN-ILLDNMDKLALEVFHKMVSKGR 121
I+ C + F TLI + L+ A+ + +MV G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 122 EPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYE 181
+PDVVTY +++G+C++ + A+ M E +K D + ++ LC DG +D A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 182 LTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYC 241
L ++ V+ YN+L+ G C+ G+ + M P+++T+N +L+ +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 242 DEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV 301
E L EA +L EM + GI P++ +YN L+ G C N+L +A + + K D V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 302 SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM 361
++ ++I+ +C + K+F + +RG+ + VT++IL++ F + G +AE+L +M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 362 RGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRV 421
+ PD + Y ++D LC + ++ A +F D+ + + ++ Y +I G+CK +V
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 422 SEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAAL 481
+A +L+ + +G P+ +T+ ++I GL ++ L A L +M E G + L
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 482 IEAIHLQDA 490
I A HL+D
Sbjct: 550 IRA-HLRDG 557
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 206/453 (45%), Gaps = 13/453 (2%)
Query: 2 IQKLGAQ--RLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
+ KLG + + I L G + +AV + D M ++ C+ + YN + + R
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
L ++M FTYS I LC D A+ +F +M +K
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCR-----------DGCIDAAISLFKEMETK 257
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
G + VVTY ++ GLCKA +++ + M+ I P+ L+ +GK+ A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
EL + + ++ YN L+ G+C R+ A + M N C PD+VT+ +++
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRD 299
YC +D+ K+ + G+ + +Y+ L++G C S ++ A + + L D
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 300 KVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLN 359
++Y +++ C G+ +A ++FE +++ ++L +V +T +I+ + G A L
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 360 QMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSS 419
+ + P+ + YT +I LCK + A + M E G P+ +YN LI +
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 420 RVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQ 452
++ + L EEM+ G D + K++I L+
Sbjct: 558 DLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 148/327 (45%), Gaps = 26/327 (7%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y + + L KAG + + +M I +N + V ++ + Y++M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL----------------------- 108
G S TY+ + G C + N +LD M +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 109 -ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
++VF + +G + VTY+I++ G C++ + A + ++ M+ +G+ PD L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 168 VGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCE 227
GLC +GK++ A E+ K K++ G+++Y +I G C+ G++ A + + G +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 228 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 287
P+++TY +++ C + L EA L+ +ME G P+ +YN L++ L A
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL-TASAK 564
Query: 288 MVKKMEAKGLR-DKVSYNTVIEAFCKG 313
++++M++ G D S VI+ G
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLSG 591
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 228/448 (50%), Gaps = 16/448 (3%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
+++ + +F +M QS +D+++ + + + +DLV + M G ++Y+
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
I+ LC F + AL V KM+ G EPDVVT + +I+G C+ A
Sbjct: 110 VINCLCRCSRFVI-----------ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
+ M E G +PD ++ G C G V+ A EL + V + YN+L++G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
C +GR A + M P+++T+ A+++ + E EA KL EM ++PD
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LRDKVSYNTVIEAFCKGGQTRRAYKLF 323
V++YN L+ GLC ++D+A M+ M KG L D V+YNT+I FCK + KLF
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQ-MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
M +RG+ D +T+ +I+ + + G A+++ ++ M+ P+ Y+ ++ LC +
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR---MDSRPNIRTYSILLYGLCMN 394
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
+ A +F +M + I D+ +YN +I+G+CK V +A L+ + +G PD V++
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 444 KLLIGGLVQEKKLELACRLWDQMMEKGF 471
+I G ++++ + + L+ +M E G
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 191/376 (50%), Gaps = 3/376 (0%)
Query: 110 LEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVG 169
+++F KM+ P +V ++ V+ + K+K +D + + HM GI D + ++
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 170 LCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPD 229
LC + +A + MK E V+ ++LI+GFC+ R+ A+ + S M+ G PD
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 230 LVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMV 289
+V YN I++ C ++++A +L ME G+ D +YN L+ GLC S + A M
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 290 KKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREG 349
+ + + +++ VI+ F K G+ A KL+E M RR ++ DV T+ LI G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 350 SSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYN 409
A+++L+ M PD + Y T+I+ CKS+ + +F +M ++G+ D I+YN
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 410 ALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEK 469
+I G ++ R A ++ M R P+ T+ +L+ GL ++E A L++ M +
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 470 GFTLDKTVSAALIEAI 485
LD T +I +
Sbjct: 411 EIELDITTYNIVIHGM 426
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 197/437 (45%), Gaps = 46/437 (10%)
Query: 1 MIQKLGAQRLI-YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
MIQ ++ + +S + K+ D + +F M YN I L R SR
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
F + +M G+ T S I+G C+ N + D A+++ KM
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG------NRVFD-----AIDLVSKMEEM 168
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
G PDVV Y +IDG CK + AV+ ++ M +G++ D +LV GLC G+ A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
L + + V+ + A+I F + G+ AM + M +PD+ TYN+++N
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-R 298
C +DEA++++ M + G PDV +YN L+ G C S ++D+ + ++M +GL
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK-LFREMAQRGLVG 347
Query: 299 DKVSYNTVIEAF--------------------------------CKGGQTRRAYKLFEGM 326
D ++YNT+I+ + C + +A LFE M
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 327 RRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREI 386
++ IELD+ T+ I+I + G+ A L + L PD + YTT+I C+ R+
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 387 GTAYGVFLDMVEQGITP 403
+ ++ M E G+ P
Sbjct: 468 DKSDLLYRKMQEDGLLP 484
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%)
Query: 277 NSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVV 336
+S L++ K ++++ L V ++ V+ K LF M GI D+
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY 105
Query: 337 TFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDM 396
++ I+I R +A ++ +M PD + +++I+ C+ + A + M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 397 VEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKL 456
E G PDV+ YN +I+G CK V++A+ L++ M+ G D VT+ L+ GL +
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 457 ELACRLWDQMMEKGFTLDKTVSAALIEA 484
A RL M+ + + A+I+
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDV 253
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 239/518 (46%), Gaps = 59/518 (11%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
YR + N + + +D A+ +F M +S ++N+ + + + +FDLV ++M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALE-------------------- 111
LG S +TY+ I+ C +L LL M KL E
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 112 ----VFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
+ +MV G PD +T+T +I GL + +AV + M++ G +P+ +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 168 VGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCE 227
GLC G +DLA+ L K+E V+IY+ +I C+ A+ + + M+ G
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 228 PDLVTY-----------------------------------NAILNYYCDEVMLDEAEKL 252
P+++TY NA+++ + E L EAEKL
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 253 VMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCK 312
EM I+PD+++Y+ L+ G C ++LD+A + + V+YNT+I FCK
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 313 GGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRIL 372
+ +LF M +RG+ + VT+T LI F + A+ + QM + P+ +
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 373 YTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQ 432
Y T++D LCK+ ++ A VF + + P + +YN +I G+CK+ +V + L+ +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 433 IRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKG 470
++G PD + + +I G ++ E A L+ +M E G
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 184/376 (48%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
A+ +F MV P + + ++ + K K+FD + E M GI + L+
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
C ++ LA L MK E ++ ++L++G+C RI A+A+ M G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM 288
D +T+ +++ EA LV M G +P++ +Y ++ GLC +D A+ +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 289 VKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLRE 348
K AK + V Y+TVI++ CK A LF M +G+ +V+T++ LI
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 349 GSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISY 408
+ A +LL+ M ++P+ + + +ID K ++ A ++ +M+++ I PD+ +Y
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 409 NALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMME 468
++LING C R+ EA H++E M + P+ VT+ LI G + K+++ L+ +M +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 469 KGFTLDKTVSAALIEA 484
+G + LI
Sbjct: 429 RGLVGNTVTYTTLIHG 444
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 185/378 (48%), Gaps = 18/378 (4%)
Query: 114 HKMVSKGREPDVVTYTIVIDGLCK-AKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCG 172
H+ + P + +I + G+C + F + ++ NG+
Sbjct: 18 HRNLQGKGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLH--------------- 62
Query: 173 DGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVT 232
K+D A L G +K + + +N L+S + + +++ M+ G +L T
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 233 YNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 292
YN ++N +C + A L+ +M G EP + + + LL G C+ ++ A + +V +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA-VALVDQM 181
Query: 293 EAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSS 351
G R D +++ T+I + A L + M +RG + ++VT+ +++ + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 352 AMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNAL 411
+A LLN+M + + ++Y+T+ID LCK R A +F +M +G+ P+VI+Y++L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 412 INGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGF 471
I+ LC R S+A L +M R +P+ VTF LI V+E KL A +L+D+M+++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 472 TLDKTVSAALIEAIHLQD 489
D ++LI + D
Sbjct: 362 DPDIFTYSSLINGFCMHD 379
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 139/331 (41%), Gaps = 46/331 (13%)
Query: 4 KLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRF--- 60
K+ A +IY I +L K D A+++F EM R I Y+ I L + R+
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 61 --------------DLVQF------------------YYQQMHPLGFSLTPFTYSRFISG 88
++V F Y +M FTYS I+G
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 89 LCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAW 148
C + D +D+ A +F M+SK P+VVTY +I+G CKAK D+ V+ +
Sbjct: 375 FC----------MHDRLDE-AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 149 EHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRT 208
M + G+ + L+ G D A + + V ++ YN L+ G C+
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 209 GRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSY 268
G++ +AM + +++ + EP + TYN ++ C +++ L + G++PDV Y
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 269 NQLLKGLCNSNQLDKAYMFMVKKMEAKGLRD 299
N ++ G C ++A K E L D
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 127/262 (48%), Gaps = 11/262 (4%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+K+ + + A I VK G + +A ++DEM + + Y+ I H R D
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
+ ++ M TY+ I+G C+ K +D+ +E+F +M +G
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAK----------RIDE-GVELFREMSQRGLV 432
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
+ VTYT +I G +A++ D A ++ M+ +G+ P+ L+ GLC +GK++ A +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
+ K+E + YN +I G C+ G++ + + G +PD++ YN +++ +C
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Query: 243 EVMLDEAEKLVMEMESCGIEPD 264
+ + +EA+ L +M G PD
Sbjct: 553 KGLKEEADALFRKMREDGPLPD 574
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 4/155 (2%)
Query: 343 KAFLREGSSAM----AEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVE 398
+ LR G +M A L M P + ++ + K ++ + M
Sbjct: 54 REILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQR 113
Query: 399 QGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLEL 458
GI+ ++ +YN LIN C+ S++S A+ L +M G P VT L+ G K++
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 459 ACRLWDQMMEKGFTLDKTVSAALIEAIHLQDAANK 493
A L DQM+E G+ D LI + L + A++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 212 bits (539), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 233/464 (50%), Gaps = 16/464 (3%)
Query: 28 AVHVFDEMTQS-NCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFI 86
A+ VFD M++ C S+ Y+ I L R + QM G + TY+ I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 87 SGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQ 146
LC+ L+D A +F +M+ +G +P+V TYT++IDGLC+ + ++A
Sbjct: 309 KALCDRG-------LIDK----AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 147 AWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFC 206
M+++ I P AL+ G C DG+V A+EL K + V +N L+ G C
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 207 RTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVY 266
R G+ +A+ + M NG PD+V+YN +++ C E ++ A KL+ M IEPD
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 267 SYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEG 325
++ ++ C + D A F+ M KG+ D+V+ T+I+ CK G+TR A + E
Sbjct: 478 TFTAIINAFCKQGKADVASAFL-GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 326 MRRRGIELDVVTFTILIKAFLREGSSAMAE-KLLNQMRGMNLSPDRILYTTIIDCLCKSR 384
+ + I + +++ L +G E +L ++ + L P + YTT++D L +S
Sbjct: 537 LVKMRILTTPHSLNVILD-MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 385 EIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFK 444
+I ++ + M G P+V Y +INGLC+ RV EA L MQ G P+ VT+
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 445 LLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQ 488
+++ G V KL+ A M+E+G+ L+ + ++L++ L
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 178/384 (46%), Gaps = 12/384 (3%)
Query: 73 LGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVI 132
GF L YS + L ++ ++ LA + +M + G ++ Y ++
Sbjct: 154 FGFRLNYPCYSSLLMSLAKL-----------DLGFLAYVTYRRMEADGFVVGMIDYRTIV 202
Query: 133 DGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLC-GDGKVDLAYELTVGAMKGKV 191
+ LCK + A +++ G D+ +L++G C G D V + +
Sbjct: 203 NALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTC 262
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
+ Y+ LI G C GR+ A +K M GC+P TY ++ CD ++D+A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
L EM G +P+V++Y L+ GLC ++++A K ++ + ++YN +I +C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 371
K G+ A++L M +R + +V TF L++ R G A LL +M LSPD +
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEM 431
Y +ID LC+ + TAY + M I PD +++ A+IN CK + A M
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKK 455
+G DEVT LI G+ + K
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGK 526
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 191/444 (43%), Gaps = 11/444 (2%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I L + G +++A + D+M + C+ + Y I L D + +M
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
P G TY+ I GLC D + A V KMV P V+TY +
Sbjct: 329 PRGCKPNVHTYTVLIDGLCR-----------DGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
I+G CK A + M + KP+ + L+ GLC GK A L + +
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
++ YN LI G CR G + A + S M EPD +T+ AI+N +C + D A
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
+ M GI D + L+ G+C + A + ++ + L S N +++
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 371
KG + + + + + G+ VVT+T L+ +R G + ++L M+ P+
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEM 431
YT II+ LC+ + A + M + G++P+ ++Y ++ G + ++ A+ M
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKK 455
RG ++ + L+ G V +K
Sbjct: 678 VERGYELNDRIYSSLLQGFVLSQK 701
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 210/514 (40%), Gaps = 67/514 (13%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I L GLID+A ++FDEM C+ Y I L R + + ++M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
+ TY+ I+G C+ D A E+ M + +P+V T+ +
Sbjct: 364 KDRIFPSVITYNALINGYCK-----------DGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
++GLC+ + KAV + M++NG+ PD + L+ GLC +G ++ AY+L +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
E L + A+I+ FC+ G+ A A M G D VT +++ C +A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVIEAF 310
++ + I +S N +L L ++ K + M+ K+ GL V +Y T+++
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKV-KEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
+ G ++++ E M+ G +V +TI+I + G AEKLL+ M+ +SP+
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALING---------------- 414
+ YT ++ + ++ A MVE+G + Y++L+ G
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Query: 415 -------------------------------------LCKSSRVSEAMHLYEEMQIRGAH 437
LCK R E+ L + + RG
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771
Query: 438 PDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGF 471
E +++ +KK L +++ GF
Sbjct: 772 L-EKAMDIIMESYCSKKKHTKCMELITLVLKSGF 804
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 125/266 (46%), Gaps = 1/266 (0%)
Query: 221 MKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS-N 279
M+ +G ++ Y I+N C + AE + ++ G D + LL G C N
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 280 QLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFT 339
D +F V E + VSY+ +I C+ G+ A+ L + M +G + T+T
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 340 ILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQ 399
+LIKA G A L ++M P+ YT +ID LC+ +I A GV MV+
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 400 GITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELA 459
I P VI+YNALING CK RV A L M+ R P+ TF L+ GL + K A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 460 CRLWDQMMEKGFTLDKTVSAALIEAI 485
L +M++ G + D LI+ +
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGL 451
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 7/303 (2%)
Query: 194 GVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKL- 252
G++ Y +++ C+ G A S + G D ++L +C + L +A K+
Sbjct: 194 GMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF 253
Query: 253 -VMEME-SCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVIEA 309
VM E +C P+ SY+ L+ GLC +L++A+ + +M KG + +Y +I+A
Sbjct: 254 DVMSKEVTCA--PNSVSYSILIHGLCEVGRLEEAFG-LKDQMGEKGCQPSTRTYTVLIKA 310
Query: 310 FCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPD 369
C G +A+ LF+ M RG + +V T+T+LI R+G A + +M + P
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 370 RILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYE 429
I Y +I+ CK + A+ + M ++ P+V ++N L+ GLC+ + +A+HL +
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQD 489
M G PD V++ +LI GL +E + A +L M D A+I A Q
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 490 AAN 492
A+
Sbjct: 491 KAD 493
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 180/431 (41%), Gaps = 46/431 (10%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I L + G ++ A + M + + + I + + D+ + M
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 72 PLGFSLTPFTYSRFISGLCEVKN-----FTL--------------INILLDNMDKLA--- 109
G SL T + I G+C+V F L +N++LD + K
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 110 --LEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
L + K+ G P VVTYT ++DGL ++ + + + E M +G P+ ++
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 168 VGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCE 227
GLC G+V+ A +L V + Y ++ G+ G++ RA+ M G E
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Query: 228 PDLVTYNAILN-YYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLK------------- 273
+ Y+++L + + +D +E+ + + E D N+L+
Sbjct: 684 LNDRIYSSLLQGFVLSQKGIDNSEESTVS-DIALRETDPECINELISVVEQLGGCISGLC 742
Query: 274 -----GLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRR 328
LC + D++ +V+ + +G+ + + + ++E++C + + +L + +
Sbjct: 743 IFLVTRLCKEGRTDESND-LVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLK 801
Query: 329 RGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGT 388
G +F ++I+ +EG + A +L+ ++ N ++ T ++CL + E G
Sbjct: 802 SGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGD 861
Query: 389 AYGVFLDMVEQ 399
V +D+V+Q
Sbjct: 862 CSEV-IDLVDQ 871
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 234/467 (50%), Gaps = 11/467 (2%)
Query: 8 QRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYY 67
+ L YR ++S+ + D AV +F +M QS ID+NR + + +++LV
Sbjct: 52 RNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC 111
Query: 68 QQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVT 127
+QM G + + +T S I+ C + + A K++ G EPD V
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSY-----------AFSTMGKIMKLGYEPDTVI 160
Query: 128 YTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAM 187
+ +++GLC +A++ + M+E G KP LV GLC +GKV A L +
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 188 KGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLD 247
+ + + Y +++ C++G+ AM + M+ + D V Y+ I++ C + LD
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 248 EAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVI 307
A L EME G + D+ +YN L+ G CN+ + D + ++ K + V+++ +I
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 308 EAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLS 367
++F K G+ R A +L + M +RGI + +T+ LI F +E A ++++ M
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
PD + + +I+ CK+ I +F +M +G+ + ++YN L+ G C+S ++ A L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLD 474
++EM R PD V++K+L+ GL +LE A ++ ++ + LD
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 237/488 (48%), Gaps = 15/488 (3%)
Query: 2 IQKLG--AQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
I KLG +I+ ++ L + +A+ + D M + + I N + L + +
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
+M GF TY ++ +C+ LA+E+ KM +
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK-----------SGQTALAMELLRKMEER 257
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
+ D V Y+I+IDGLCK D A + M G K D L+ G C G+ D
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
+L +K K+ V+ ++ LI F + G++R A + M G P+ +TYN++++
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LR 298
+C E L+EA ++V M S G +PD+ ++N L+ G C +N++D + + ++M +G +
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG-LELFREMSLRGVIA 436
Query: 299 DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLL 358
+ V+YNT+++ FC+ G+ A KLF+ M R + D+V++ IL+ G A ++
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Query: 359 NQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKS 418
++ + D +Y II +C + ++ A+ +F + +G+ D +YN +I+ LC+
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Query: 419 SRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVS 478
+S+A L+ +M G PDE+T+ +LI + + A L ++M GF D +
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTV 616
Query: 479 AALIEAIH 486
+I +
Sbjct: 617 KMVINMLS 624
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 13/295 (4%)
Query: 1 MIQK-LGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
M+Q+ + + Y + I K +++A+ + D M C + +N I + +R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
D +++M G TY+ + G C+ ++A ++F +MVS+
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL-----------EVAKKLFQEMVSR 467
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
PD+V+Y I++DGLC E +KA++ + + ++ ++ D ++ G+C KVD A
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
++L V+ YN +IS CR + +A + M G PD +TYN ++
Sbjct: 528 WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEA 294
+ + A +L+ EM+S G DV + ++ L +S +LDK+++ M+ A
Sbjct: 588 HLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKSFLDMLSTTRA 641
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 219/459 (47%), Gaps = 32/459 (6%)
Query: 54 LIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVK-------------------N 94
L++ F L + M +G + Y+ I LCE+K N
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261
Query: 95 FTLINILLDNMDKL-----ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWE 149
N+L+D + K A+ + + K +PDVVTY ++ GLCK +EF+ ++ +
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 150 HMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGV----LIYNALISGF 205
M+ P A ++LV GL GK++ A L +K V+FGV +YNALI
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL----VKRVVDFGVSPNLFVYNALIDSL 377
Query: 206 CRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDV 265
C+ + A + M G P+ VTY+ +++ +C LD A + EM G++ V
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 266 YSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEG 325
Y YN L+ G C + A FM + + K V+Y +++ +C G+ +A +L+
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 326 MRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSRE 385
M +GI + TFT L+ R G A KL N+M N+ P+R+ Y +I+ C+ +
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 386 IGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKL 445
+ A+ +M E+GI PD SY LI+GLC + + SEA + + +E+ +
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 446 LIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
L+ G +E KLE A + +M+++G LD LI+
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 218/436 (50%), Gaps = 19/436 (4%)
Query: 14 AQISNLV----KAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
A +S+LV K G I++A+++ + YN I L + +F + + +
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M +G TYS I C LD AL +MV G + V Y
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGK-------LDT----ALSFLGEMVDTGLKLSVYPYN 441
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+I+G CK + A MI ++P +L+ G C GK++ A L M G
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL-YHEMTG 500
Query: 190 K-VEFGVLIYNALISGFCRTGRIRRAMAIKSFM-KWNGCEPDLVTYNAILNYYCDEVMLD 247
K + + + L+SG R G IR A+ + + M +WN +P+ VTYN ++ YC+E +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN-VKPNRVTYNVMIEGYCEEGDMS 559
Query: 248 EAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVI 307
+A + + EM GI PD YSY L+ GLC + Q +A +F+ + +++ Y ++
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 308 EAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLS 367
FC+ G+ A + + M +RG++LD+V + +LI L+ + LL +M L
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
PD ++YT++ID K+ + A+G++ M+ +G P+ ++Y A+INGLCK+ V+EA L
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 428 YEEMQIRGAHPDEVTF 443
+MQ + P++VT+
Sbjct: 740 CSKMQPVSSVPNQVTY 755
Score = 188 bits (477), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 232/506 (45%), Gaps = 38/506 (7%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+Y A I +L K +A +FD M + R + Y+ I + R + D + +
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNM--DKL------------------- 108
M G L+ + Y+ I+G C+ + + + M KL
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 109 ---ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAA 165
AL ++H+M KG P + T+T ++ GL +A AV+ + M E +KP+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 166 LVVGLCGDGKVDLAYELTVGAMKGKVEFGVLI----YNALISGFCRTGRIRRAMAIKSFM 221
++ G C +G + A+E +K E G++ Y LI G C TG+ A +
Sbjct: 548 MIEGYCEEGDMSKAFEF----LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 222 KWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQL 281
CE + + Y +L+ +C E L+EA + EM G++ D+ Y L+ G +
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG--SLKHK 661
Query: 282 DKAYMF-MVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFT 339
D+ F ++K+M +GL+ D V Y ++I+A K G + A+ +++ M G + VT+T
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 340 ILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFL-DMVE 398
+I + G AE L ++M+ ++ P+++ Y +D L K E+ V L + +
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG-EVDMQKAVELHNAIL 780
Query: 399 QGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLEL 458
+G+ + +YN LI G C+ R+ EA L M G PD +T+ +I L + ++
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 459 ACRLWDQMMEKGFTLDKTVSAALIEA 484
A LW+ M EKG D+ LI
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 232/502 (46%), Gaps = 30/502 (5%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFI-GVLIRHSRFDLVQFYYQQ 69
IY I +L + + +A + M + C V + YN I G+ + ++ V +
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI---K 285
Query: 70 MHPLGFSLTP--FTYSRFISGLCEVKNFTLINILLDNMDKL------------------- 108
G L P TY + GLC+V+ F + ++D M L
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKR 345
Query: 109 -----ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKAC 163
AL + ++V G P++ Y +ID LCK ++F +A ++ M + G++P++
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 164 AALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKW 223
+ L+ C GK+D A + ++ V YN+LI+G C+ G I A + M
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 224 NGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDK 283
EP +VTY +++ YC + +++A +L EM GI P +Y++ LL GL + +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 284 AYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIK 343
A + E ++V+YN +IE +C+ G +A++ + M +GI D ++ LI
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 344 AFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITP 403
G ++ A+ ++ + N + I YT ++ C+ ++ A V +MV++G+
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 404 DVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLW 463
D++ Y LI+G K L +EM RG PD+V + +I + + A +W
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 464 DQMMEKGFTLDKTVSAALIEAI 485
D M+ +G ++ A+I +
Sbjct: 706 DLMINEGCVPNEVTYTAVINGL 727
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 204/466 (43%), Gaps = 46/466 (9%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y + I+ K G I A EM + Y +G + + Y +M
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G + + +T++ +SGL + + A+++F++M +P+ VTY ++
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRA-----------GLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
I+G C+ + KA + + M E GI PD + L+ GLC G+ A G KG
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
E + Y L+ GFCR G++ A+++ M G + DLV Y +++
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
L+ EM G++PD Y ++ + +A+ + + ++V+Y VI C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 312 KGGQTRRAYKLFEGMR-------------------------RRGIEL----------DVV 336
K G A L M+ ++ +EL +
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 337 TFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDM 396
T+ +LI+ F R+G A +L+ +M G +SPD I YTT+I+ LC+ ++ A ++ M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 397 VEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVT 442
E+GI PD ++YN LI+G C + + +A L EM +G P+ T
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 190/414 (45%), Gaps = 13/414 (3%)
Query: 81 TYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKE 140
T S + GL + ++F L A+E+F+ MVS G PDV YT VI LC+ K+
Sbjct: 194 TLSALLHGLVKFRHFGL-----------AMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 141 FDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNA 200
+A + HM G + L+ GLC KV A + ++ V+ Y
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 201 LISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCG 260
L+ G C+ + + M P ++++ ++EA LV + G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 261 IEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRA 319
+ P+++ YN L+ LC + +A + + +M GLR + V+Y+ +I+ FC+ G+ A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAEL-LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 320 YKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDC 379
M G++L V + LI + G + AE + +M L P + YT+++
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 380 LCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPD 439
C +I A ++ +M +GI P + ++ L++GL ++ + +A+ L+ EM P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 440 EVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDAANK 493
VT+ ++I G +E + A +M EKG D LI + L A++
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 174/384 (45%), Gaps = 40/384 (10%)
Query: 112 VFHKMVSK-GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGL 170
VF M++K P+V T + ++ GL K + F A++ + M+ GI+PD
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPD----------- 226
Query: 171 CGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDL 230
V IY +I C + RA + + M+ GC+ ++
Sbjct: 227 ------------------------VYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNI 262
Query: 231 VTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVK 290
V YN +++ C + + EA + ++ ++PDV +Y L+ GLC + + M +
Sbjct: 263 VPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDE 322
Query: 291 KMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGS 350
+ + + + ++++E K G+ A L + + G+ ++ + LI + +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 351 SAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNA 410
AE L ++M + L P+ + Y+ +ID C+ ++ TA +MV+ G+ V YN+
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 411 LINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKG 470
LING CK +S A EM + P VT+ L+GG + K+ A RL+ +M KG
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 471 FTLD----KTVSAALIEAIHLQDA 490
T+ + L A ++DA
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDA 526
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 18/176 (10%)
Query: 328 RRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRIL--------------- 372
RG + +F ILI A ++ A LL + L P +
Sbjct: 97 HRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSS 156
Query: 373 --YTTIIDCLCKSREIGTAYGVFLDMVEQ-GITPDVISYNALINGLCKSSRVSEAMHLYE 429
+ +I +SR + VF M+ + + P+V + +AL++GL K AM L+
Sbjct: 157 SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFN 216
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
+M G PD + +I L + K L A + M G ++ LI+ +
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 232/473 (49%), Gaps = 12/473 (2%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y +++L + GL+D+ V+ EM + YN+ + + + Y ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G FTY+ I G C+ K+ LD+ A +VF++M KG + V YT +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKD-------LDS----AFKVFNEMPLKGCRRNEVAYTHL 294
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
I GLC A+ D+A+ + M ++ P + L+ LCG + A L + +
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
+ + Y LI C + +A + M G P+++TYNA++N YC M+++A
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
+V MES + P+ +YN+L+KG C SN + KA + K +E K L D V+YN++I+ C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 371
+ G AY+L M RG+ D T+T +I + + A L + + ++P+ +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEM 431
+YT +ID CK+ ++ A+ + M+ + P+ +++NALI+GLC ++ EA L E+M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
G P T +LI L+++ + A + QM+ G D I+
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 206/447 (46%), Gaps = 20/447 (4%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNC----RVFSIDYNRFIGVLIRHSRFDLVQFYY 67
Y I L A ID+A+ +F +M C R +++ G + +LV+
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK--- 347
Query: 68 QQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVT 127
+M G TY+ I LC F + A E+ +M+ KG P+V+T
Sbjct: 348 -EMEETGIKPNIHTYTVLIDSLCSQCKF-----------EKARELLGQMLEKGLMPNVIT 395
Query: 128 YTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAM 187
Y +I+G CK + AV E M + P+ + L+ G C V A + +
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKML 454
Query: 188 KGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLD 247
+ KV V+ YN+LI G CR+G A + S M G PD TY ++++ C ++
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 248 EAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVI 307
EA L +E G+ P+V Y L+ G C + ++D+A++ + K + L + +++N +I
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 308 EAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLS 367
C G+ + A L E M + G++ V T TILI L++G A QM
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
PD YTT I C+ + A + M E G++PD+ +Y++LI G + + A +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEK 454
+ M+ G P + TF LI L++ K
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 202/393 (51%), Gaps = 8/393 (2%)
Query: 99 NILLDNMDKLAL-----EVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIE 153
N LL+++ + L +V+ +M+ P++ TY +++G CK ++A Q ++E
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 154 NGIKPDNKACAALVVGLCGDGKVDLAYEL-TVGAMKGKVEFGVLIYNALISGFCRTGRIR 212
G+ PD +L++G C +D A+++ +KG + Y LI G C RI
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG-CRRNEVAYTHLIHGLCVARRID 305
Query: 213 RAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLL 272
AM + MK + C P + TY ++ C EA LV EME GI+P++++Y L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 273 KGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIE 332
LC+ + +KA + + +E + + ++YN +I +CK G A + E M R +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 333 LDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGV 392
+ T+ LIK + + A +LN+M + PD + Y ++ID C+S +AY +
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 393 FLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQ 452
M ++G+ PD +Y ++I+ LCKS RV EA L++ ++ +G +P+ V + LI G +
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 453 EKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
K++ A + ++M+ K + ALI +
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 208/462 (45%), Gaps = 14/462 (3%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
+D A VF+EM CR + Y I L R D + +M T TY+
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
I LC + AL + +M G +P++ TYT++ID LC +F+KA
Sbjct: 329 LIKSLCGSER-----------KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
+ M+E G+ P+ AL+ G C G ++ A ++ K+ YN LI G
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
+C++ + +AM + + M PD+VTYN++++ C D A +L+ M G+ PD
Sbjct: 438 YCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVS-YNTVIEAFCKGGQTRRAYKLF 323
++Y ++ LC S ++++A + +E KG+ V Y +I+ +CK G+ A+ +
Sbjct: 497 QWTYTSMIDSLCKSKRVEEA-CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
E M + + +TF LI +G A L +M + L P T +I L K
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
+ AY F M+ G PD +Y I C+ R+ +A + +M+ G PD T+
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 444 KLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
LI G + A + +M + G + +LI+ +
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 228/508 (44%), Gaps = 32/508 (6%)
Query: 1 MIQK-LGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
M++K L + Y A I+ K G+I+ AV V + M + YN I + S
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
+M TY+ I G C NF LL M+ +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN-----------DR 491
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
G PD TYT +ID LCK+K ++A ++ + + G+ P+ AL+ G C GKVD A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
+ + + L +NALI G C G+++ A ++ M G +P + T +++
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRD 299
+ D A +M S G +PD ++Y ++ C +L A M K E D
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 300 KVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL------REGS--- 350
+Y+++I+ + GQT A+ + + MR G E TF LIK L ++GS
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 351 ----SAMAE-----KLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMV-EQG 400
S M E +LL +M +++P+ Y +I +C+ + A VF M +G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 401 ITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELAC 460
I+P + +NAL++ CK + +EA + ++M G P + K+LI GL ++ + E
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 461 RLWDQMMEKGFTLDKTVSAALIEAIHLQ 488
++ +++ G+ D+ +I+ + Q
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQ 879
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 220/502 (43%), Gaps = 33/502 (6%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+KL Y I K+ + +A+ V ++M + + YN I R FD
Sbjct: 422 RKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
M+ G +TY+ I LC+ K + A ++F + KG
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV-----------EEACDLFDSLEQKGVN 529
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
P+VV YT +IDG CKA + D+A E M+ P++ AL+ GLC DGK+ A L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
+K ++ V LI + G A + M +G +PD TY + YC
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKV 301
E L +AE ++ +M G+ PD+++Y+ L+KG + Q + A+ ++K+M G +
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF-DVLKRMRDTGCEPSQH 708
Query: 302 SYNTVIEAFC-------KGGQTR-----------RAYKLFEGMRRRGIELDVVTFTILIK 343
++ ++I+ KG + +L E M + + ++ LI
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 344 AFLREGSSAMAEKLLNQM-RGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGIT 402
G+ +AEK+ + M R +SP +++ ++ C CK ++ A V DM+ G
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 403 PDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRL 462
P + S LI GL K +++ + G + DE+ +K++I G+ ++ +E L
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Query: 463 WDQMMEKGFTLDKTVSAALIEA 484
++ M + G + LIE
Sbjct: 889 FNVMEKNGCKFSSQTYSLLIEG 910
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 93/183 (50%)
Query: 303 YNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 362
YNT++ + + G +++ M + ++ T+ ++ + + G+ A + ++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 363 GMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVS 422
L PD YT++I C+ +++ +A+ VF +M +G + ++Y LI+GLC + R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 423 EAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI 482
EAM L+ +M+ P T+ +LI L ++ A L +M E G + LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 483 EAI 485
+++
Sbjct: 366 DSL 368
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 208 bits (530), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 233/487 (47%), Gaps = 19/487 (3%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I + +++A+ + +EM S C + + I + + D + ++M
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
+G Y+ I G C+ LD L F +++ +G P +TY +
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGE-------LDRGKAL----FDEVLERGDSPCAITYNTL 288
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
I G CK + +A + +E MIE G++P+ L+ GLCG GK A +L ++
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
E + YN +I+ C+ G + A+ I MK PD +TYN +L C + LDEA K
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 252 LVMEM--ESCGIEPDVYSYNQLLKGLCNSNQLDKA---YMFMVKKMEAKGLRDKVSYNTV 306
L+ M +S +PDV SYN L+ GLC N+L +A Y +V+K+ G D+V+ N +
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL---GAGDRVTTNIL 465
Query: 307 IEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNL 366
+ + K G +A +L++ + I + T+T +I F + G +A+ LL +MR L
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 367 SPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMH 426
P Y ++ LCK + A+ +F +M PDV+S+N +I+G K+ + A
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 427 LYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
L M G PD T+ LI ++ L+ A +D+M++ GF D + ++++
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 487 LQDAANK 493
Q +K
Sbjct: 646 SQGETDK 652
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 212/473 (44%), Gaps = 53/473 (11%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
+ AV VF + S + + N + L+R +L +Y++M L T+
Sbjct: 54 LKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKM------LETDTFIN 106
Query: 85 FIS--GLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFD 142
F+S GL E + A V M+ +G +V + I++ GLC+ E
Sbjct: 107 FVSLSGLLEC-------YVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECG 159
Query: 143 KAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALI 202
KAV M N + PD V YN +I
Sbjct: 160 KAVSLLREMRRNSLMPD-----------------------------------VFSYNTVI 184
Query: 203 SGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIE 262
GFC + +A+ + + MK +GC LVT+ +++ +C +DEA + EM+ G+E
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 263 PDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKL 322
D+ Y L++G C+ +LD+ + +E ++YNT+I FCK GQ + A ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 323 FEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCK 382
FE M RG+ +V T+T LI G + A +LLN M + P+ + Y II+ LCK
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 383 SREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAH--PDE 440
+ A + M ++ PD I+YN L+ GLC + EA L M ++ PD
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 441 VTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDAANK 493
+++ LI GL +E +L A ++D ++EK D+ + L+ + NK
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 191/452 (42%), Gaps = 48/452 (10%)
Query: 5 LGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQ 64
L A ++Y + I G +D+ +FDE+ + +I YN I + +
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 65 FYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPD 124
++ M G +TY+ I GLC V K AL++ + M+ K EP+
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGK-----------TKEALQLLNLMIEKDEEPN 351
Query: 125 VVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTV 184
VTY I+I+ LCK AV+ E M + +PDN L+ GLC G +D A +L
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 185 GAMKGK--VEFGVLIYNALISGFCRTGRIRRAMAI------------------------- 217
+K + V+ YNALI G C+ R+ +A+ I
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471
Query: 218 -----KSFMKWNGCEPDLV-----TYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYS 267
K+ W + TY A+++ +C ML+ A+ L+ +M ++P V+
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 268 YNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMR 327
YN LL LC LD+A+ + D VS+N +I+ K G + A L GM
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 328 RRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIG 387
R G+ D+ T++ LI FL+ G A ++M PD + +++ E
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 388 TAYGVFLDMVEQGITPDVISYNALINGLCKSS 419
+ +V++ I D +++ +C SS
Sbjct: 652 KLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 246/534 (46%), Gaps = 85/534 (15%)
Query: 14 AQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPL 73
A I +LV+ G ++ A V+ E+++S + N + L + + + V + Q+
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264
Query: 74 GFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVID 133
G TY+ IS + + A E+ + M KG P V TY VI+
Sbjct: 265 GVYPDIVTYNTLISAYSS-----------KGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 134 GLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKV-------------DLAY 180
GLCK ++++A + + M+ +G+ PD+ +L++ C G V D+
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 181 EL-------TVGAMKGKVEFGVL---------------IYNALISGFCRTGRIRRAMAIK 218
+L ++ G ++ ++ IY LI G+CR G I AM ++
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 219 SFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
+ M GC D+VTYN IL+ C ML EA+KL EM + PD Y+ L+ G C
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 279 NQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAF--------------------------- 310
L A M + +KM+ K +R D V+YNT+++ F
Sbjct: 494 GNLQNA-MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 311 --------CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 362
C G A+++++ M + I+ V+ +IK + R G+++ E L +M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 363 GMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQ--GITPDVISYNALINGLCKSSR 420
PD I Y T+I + + A+G+ M E+ G+ PDV +YN++++G C+ ++
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 421 VSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLD 474
+ EA + +M RG +PD T+ +I G V + L A R+ D+M+++GF+ D
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 207/437 (47%), Gaps = 18/437 (4%)
Query: 58 SRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTL----INILLDNMDK-----L 108
S FDL+ Y Q L + FT L K FT+ N L+ ++ + L
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFT-------LLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
A V+ ++ G +V T I+++ LCK + +K + E G+ PD L+
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 169 GLCGDGKVDLAYELTVGAMKGK-VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCE 227
G ++ A+EL + AM GK GV YN +I+G C+ G+ RA + + M +G
Sbjct: 279 AYSSKGLMEEAFEL-MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 228 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 287
PD TY ++L C + + E EK+ +M S + PD+ ++ ++ S LDKA M+
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 288 MVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLR 347
EA + D V Y +I+ +C+ G A L M ++G +DVVT+ ++ +
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 348 EGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 407
A+KL N+M L PD T +ID CK + A +F M E+ I DV++
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 408 YNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMM 467
YN L++G K + A ++ +M + P +++ +L+ L + L A R+WD+M+
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 468 EKGFTLDKTVSAALIEA 484
K + ++I+
Sbjct: 578 SKNIKPTVMICNSMIKG 594
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 167/361 (46%), Gaps = 15/361 (4%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
+ + +S ++G +D+A+ F+ + ++ ++ Y I R + +M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G ++ TY+ + GLC+ K +L DKL F++M + PD T TI+
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRK-------MLGEADKL----FNEMTERALFPDSYTLTIL 486
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
IDG CK A++ ++ M E I+ D L+ G G +D A E+ + ++
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
+ Y+ L++ C G + A + M +P ++ N+++ YC + E
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAK--GL-RDKVSYNTVIE 308
+ +M S G PD SYN L+ G + KA+ +VKKME + GL D +YN+++
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG-LVKKMEEEQGGLVPDVFTYNSILH 665
Query: 309 AFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSP 368
FC+ Q + A + M RG+ D T+T +I F+ + + A ++ ++M SP
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 369 D 369
D
Sbjct: 726 D 726
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 26/176 (14%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y ++ L G + +A V+DEM N + + N I R + + ++M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 72 PLGFSLTPFTYSRFISGLCEVKN----------------------FTLINIL----LDNM 105
GF +Y+ I G +N FT +IL N
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 106 DKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNK 161
K A V KM+ +G PD TYT +I+G +A + + M++ G PD+K
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 339 TILIKAFLREGSSAMAEKLLNQMRGM--NLSPDRILYTTIIDCLCKSREIGTAYGVFLDM 396
+ L++ R G S + +++N + N + ++ +I ++R++ A+ F +
Sbjct: 134 SCLLRMIRRSGVSRL--EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLL 191
Query: 397 VEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKL 456
+G T + + NALI L + V A +Y+E+ G + T +++ L ++ K+
Sbjct: 192 RSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKM 251
Query: 457 ELACRLWDQMMEKGFTLDKTVSAALIEA 484
E Q+ EKG D LI A
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISA 279
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 239/513 (46%), Gaps = 55/513 (10%)
Query: 20 VKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRF-DLVQFYYQQMHPLGFSLT 78
++ G +D A+ + ++M + C ++ N + + R D + F + + GF
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 79 PFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKA 138
+T++ ++GLC+ + K A+E+ M+ +G +PDV TY VI GLCK
Sbjct: 295 QYTFNTLVNGLCKAGHV-----------KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 139 KEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIY 198
E +AV+ + MI P+ L+ LC + +V+ A EL + V +
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 199 NALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA--------- 249
N+LI G C T R AM + M+ GCEPD TYN +++ C + LDEA
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 250 --------------------------EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDK 283
E++ EME G+ + +YN L+ GLC S +++
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 284 AYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIK 343
A M + + DK +YN+++ FC+GG ++A + + M G E D+VT+ LI
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 344 AFLREGSSAMAEKLLN--QMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQG- 400
+ G +A KLL QM+G+NL+P Y +I L + R+ A +F +M+EQ
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 401 ITPDVISYNALINGLCK-SSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELA 459
PD +SY + GLC + EA+ E+ +G P+ + +L GL+ E
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETL 701
Query: 460 CRLWDQMMEKGFTLDKTVS--AALIEAIHLQDA 490
+L + +M+K ++ VS L++ QDA
Sbjct: 702 VKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDA 734
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 236/478 (49%), Gaps = 21/478 (4%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
+Y + L ++G D + ++M S C + + + F+ ++ +++F+L +
Sbjct: 85 LYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGT---STFLILIESYAQFELQDEILSVV 141
Query: 71 HPL--GFSLTPFT--YSRFISGLCEVKNFTLINILLDNMDKLALEVFH-KMVSKGREPDV 125
+ F L P T Y+R ++N+L+D +E+ H KM G +PDV
Sbjct: 142 DWMIDEFGLKPDTHFYNR------------MLNLLVDGNSLKLVEISHAKMSVWGIKPDV 189
Query: 126 VTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVG 185
T+ ++I LC+A + A+ E M G+ PD K ++ G +G +D A +
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 186 AMKGKVEFGVLIYNALISGFCRTGRIRRAMA-IKSFMKWNGCEPDLVTYNAILNYYCDEV 244
++ + + N ++ GFC+ GR+ A+ I+ +G PD T+N ++N C
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 245 MLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYN 304
+ A +++ M G +PDVY+YN ++ GLC ++ +A + + + + V+YN
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 305 TVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGM 364
T+I CK Q A +L + +GI DV TF LI+ + +A +L +MR
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 365 NLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEA 424
PD Y +ID LC ++ A + M G VI+YN LI+G CK+++ EA
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 425 MHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI 482
+++EM++ G + VT+ LI GL + +++E A +L DQM+ +G DK +L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 216/442 (48%), Gaps = 16/442 (3%)
Query: 47 YNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMD 106
YNR + +L+ + LV+ + +M G T++ I LC
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL----------- 205
Query: 107 KLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAAL 166
+ A+ + M S G PD T+T V+ G + + D A++ E M+E G N + +
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 167 VVGLCGDGKVDLAYELTVGAMKGKVEF--GVLIYNALISGFCRTGRIRRAMAIKSFMKWN 224
V G C +G+V+ A + M + F +N L++G C+ G ++ A+ I M
Sbjct: 266 VHGFCKEGRVEDALNF-IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 225 GCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA 284
G +PD+ TYN++++ C + EA +++ +M + P+ +YN L+ LC NQ+++A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 285 YMFMVKKMEAKG-LRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIK 343
+ + + +KG L D ++N++I+ C R A +LFE MR +G E D T+ +LI
Sbjct: 385 TE-LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 344 AFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITP 403
+ +G A +L QM + I Y T+ID CK+ + A +F +M G++
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 404 DVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLW 463
+ ++YN LI+GLCKS RV +A L ++M + G PD+ T+ L+ + ++ A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 464 DQMMEKGFTLDKTVSAALIEAI 485
M G D LI +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGL 585
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 99/268 (36%), Gaps = 48/268 (17%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y I KA +A +FDEM S+ YN I L + R + Q
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M G +TY+ ++ C + K A ++ M S G EPD+VTY
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDI-----------KKAADIVQAMTSNGCEPDIVTYG 579
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+I GLCKA G+V++A +L
Sbjct: 580 TLISGLCKA-----------------------------------GRVEVASKLLRSIQMK 604
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAI-KSFMKWNGCEPDLVTYNAILNYYCD-EVMLD 247
+ YN +I G R + A+ + + ++ N PD V+Y + C+ +
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR 664
Query: 248 EAEKLVMEMESCGIEPDVYSYNQLLKGL 275
EA ++E+ G P+ S L +GL
Sbjct: 665 EAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 49/462 (10%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y IS KAG I+ A+ V D M+ S D+V
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSP---------------------DVV------ 205
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
TY+ + LC+ K A+EV +M+ + PDV+TYT
Sbjct: 206 -----------TYNTILRSLCDSGKL-----------KQAMEVLDRMLQRDCYPDVITYT 243
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
I+I+ C+ A++ + M + G PD LV G+C +G++D A +
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
+ V+ +N ++ C TGR A + + M G P +VT+N ++N+ C + +L A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEA 309
++ +M G +P+ SYN LL G C ++D+A ++ + + D V+YNT++ A
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 310 FCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPD 369
CK G+ A ++ + +G ++T+ +I + G + A KLL++MR +L PD
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 370 RILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYE 429
I Y++++ L + ++ A F + GI P+ +++N+++ GLCKS + A+
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGF 471
M RG P+E ++ +LI GL E + A L +++ KG
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 205/418 (49%), Gaps = 38/418 (9%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
A ++ + G PDV+TY ++I G CKA E + A+ + M + PD ++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILR 212
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
LC GK+ A E+ ++ V+ Y LI CR + AM + M+ GC P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQ-------- 280
D+VTYN ++N C E LDEA K + +M S G +P+V ++N +L+ +C++ +
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 281 ---LDKAY-----------------------MFMVKKMEAKGLR-DKVSYNTVIEAFCKG 313
L K + + +++KM G + + +SYN ++ FCK
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 314 GQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILY 373
+ RA + E M RG D+VT+ ++ A ++G A ++LNQ+ SP I Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 374 TTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQI 433
T+ID L K+ + G A + +M + + PD I+Y++L+ GL + +V EA+ + E +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 434 RGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDAA 491
G P+ VTF ++ GL + ++ + A M+ +G ++T LIE + + A
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 187/378 (49%), Gaps = 5/378 (1%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
+ MV G PD++ T +I G C+ + KA + E + +G PD ++
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
G C G+++ A + + V V+ YN ++ C +G++++AM + M C P
Sbjct: 181 GYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM 288
D++TY ++ C + + A KL+ EM G PDV +YN L+ G+C +LD+A F+
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 289 VKKMEAKGLRDKV-SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLR 347
M + G + V ++N ++ + C G+ A KL M R+G VVTF ILI R
Sbjct: 298 -NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 348 EGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 407
+G A +L +M P+ + Y ++ CK +++ A MV +G PD+++
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 408 YNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMM 467
YN ++ LCK +V +A+ + ++ +G P +T+ +I GL + K A +L D+M
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 468 EKGFTLDKTVSAALIEAI 485
K D ++L+ +
Sbjct: 477 AKDLKPDTITYSSLVGGL 494
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 7/338 (2%)
Query: 135 LCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYE-LTVGAMKGKVEF 193
+ + E ++ + E+M+ +G PD C L+ G C GK A + L + G V
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP- 170
Query: 194 GVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLV 253
V+ YN +ISG+C+ G I A+++ M + PD+VTYN IL CD L +A +++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 254 MEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LRDKVSYNTVIEAFCK 312
M PDV +Y L++ C + + A M ++ +M +G D V+YN ++ CK
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHA-MKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 313 GGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRIL 372
G+ A K M G + +V+T I++++ G AEKLL M SP +
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 373 YTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQ 432
+ +I+ LC+ +G A + M + G P+ +SYN L++G CK ++ A+ E M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 433 IRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKG 470
RG +PD VT+ ++ L ++ K+E A + +Q+ KG
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 158/295 (53%), Gaps = 7/295 (2%)
Query: 200 ALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESC 259
LI GFCR G+ R+A I ++ +G PD++TYN +++ YC ++ A ++ M
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 260 GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRA 319
+ PDV +YN +L+ LC+S +L +A + + ++ D ++Y +IEA C+ A
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 320 YKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDC 379
KL + MR RG DVVT+ +L+ +EG A K LN M P+ I + I+
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 380 LCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPD 439
+C + A + DM+ +G +P V+++N LIN LC+ + A+ + E+M G P+
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 440 EVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLD----KTVSAALIEAIHLQDA 490
+++ L+ G +EKK++ A ++M+ +G D T+ AL + ++DA
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 8/231 (3%)
Query: 255 EMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGG 314
++ES G+ + L G NSN + V A L D V N + + G
Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSN--GNGHYSSVNSSFA--LED-VESNNHLRQMVRTG 116
Query: 315 QTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYT 374
+ +K E M G D++ T LI+ F R G + A K+L + G PD I Y
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 375 TIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIR 434
+I CK+ EI A V M ++PDV++YN ++ LC S ++ +AM + + M R
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 435 GAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
+PD +T+ +LI ++ + A +L D+M ++G T D L+ I
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 17/224 (7%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
L Y + K +D+A+ + M C + YN + L + + + Q
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
+ G S TY+ I GL + A+++ +M +K +PD +TY+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKA-----------GKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
++ GL + + D+A++ + GI+P+ ++++GLC + D A + V +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAI------KSFMKWNGCE 227
+ Y LI G G + A+ + K MK + E
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAE 592
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 205 bits (521), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 226/496 (45%), Gaps = 48/496 (9%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
+D A+ + + M Y+ I L + R + + +M LG SL TYS
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
I GL + +N A + H+MVS G Y I + K +KA
Sbjct: 318 LIDGLLKGRN-----------ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
++ MI +G+ P +A A+L+ G C + V YEL V K + Y ++ G
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
C +G + A I M +GC P++V Y ++ + +A +++ EM+ GI PD
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-------------------------- 298
++ YN L+ GL + ++D+A F+V+ +E GL+
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 299 ----------DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLRE 348
+KV +I +CK G+ A + M +GI D T+T+L+ +
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 349 GSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISY 408
AE++ +MRG ++PD Y +I+ K + A +F +MVE+G+TP+VI Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 409 NALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMME 468
N L+ G C+S + +A L +EM ++G HP+ VT+ +I G + L A RL+D+M
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 469 KGFTLDKTVSAALIEA 484
KG D V L++
Sbjct: 726 KGLVPDSFVYTTLVDG 741
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 227/511 (44%), Gaps = 39/511 (7%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+IY I ++ A+ V EM + YN I L + R D + + +
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL--------------------- 108
M G FTY FISG E F + + M +
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 109 ---ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAA 165
A + MV +G D TYT++++GL K + D A + + M GI PD +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 166 LVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNG 225
L+ G G + A + ++ + V+IYN L+ GFCR+G I +A + M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 226 CEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAY 285
P+ VTY I++ YC L EA +L EM+ G+ PD + Y L+ G C N +++A
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA- 751
Query: 286 MFMVKKMEAKGLRDKVS-YNTVIEAFCKGGQTRRAY----KLFEGMRRRGIELDVVTFTI 340
+ KG + +N +I K G+T +L +G R + + VT+ I
Sbjct: 752 -ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 341 LIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQG 400
+I +EG+ A++L +QM+ NL P I YT++++ K + VF + + G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 401 ITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEV-----TFKLLIGGLVQEKK 455
I PD I Y+ +IN K ++A+ L ++M + A D T + L+ G + +
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 456 LELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
+E+A ++ + M+ + D SA +IE I+
Sbjct: 931 MEVAEKVMENMVRLQYIPD---SATVIELIN 958
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 198/453 (43%), Gaps = 46/453 (10%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
+Y I + K G++++A +FD M S + Y I R +M
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTI 130
++P+TY + G+C + LD A + +M++ G P+VV YT
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGD-------LDG----AYNIVKEMIASGCRPNVVIYTT 457
Query: 131 VIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGK 190
+I + F A++ + M E GI PD
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPD------------------------------- 486
Query: 191 VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAE 250
+ YN+LI G + R+ A + M NG +P+ TY A ++ Y + A+
Sbjct: 487 ----IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 251 KLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAF 310
K V EM CG+ P+ L+ C ++ +A ++ L D +Y ++
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
K + A ++F MR +GI DV ++ +LI F + G+ A + ++M L+P+
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEE 430
I+Y ++ C+S EI A + +M +G+ P+ ++Y +I+G CKS ++EA L++E
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 431 MQIRGAHPDEVTFKLLIGGLVQEKKLELACRLW 463
M+++G PD + L+ G + +E A ++
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 206/490 (42%), Gaps = 59/490 (12%)
Query: 20 VKAGLIDQAVHVFDEMTQ-------SNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHP 72
+ G I++AV VF S C+V + L+R +R DL Y+ M
Sbjct: 162 IAKGYIEEAVFVFSSSMGLELVPRLSRCKVL-------LDALLRWNRLDLFWDVYKGMVE 214
Query: 73 LGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL----------ALEVFHKMVSKGRE 122
TY I C N L +L +K AL++ M+ KG
Sbjct: 215 RNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLV 274
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
P TY ++IDGLCK K + A M G+ DN + L+ GL D
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD----- 329
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
A KG L++ + G + IK +M Y+ +
Sbjct: 330 ---AAKG------LVHEMVSHG----------INIKPYM-----------YDCCICVMSK 359
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVS 302
E ++++A+ L M + G+ P +Y L++G C + + Y +V+ + + +
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 303 YNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 362
Y TV++ C G AY + + M G +VV +T LIK FL+ A ++L +M+
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 363 GMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVS 422
++PD Y ++I L K++ + A ++MVE G+ P+ +Y A I+G ++S +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 423 EAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI 482
A +EM+ G P++V LI ++ K+ AC + M+++G D L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 483 EAIHLQDAAN 492
+ D +
Sbjct: 600 NGLFKNDKVD 609
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 185/419 (44%), Gaps = 56/419 (13%)
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
G+ D V + I+ DG ++AV + + + P C L+ L ++DL
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIR---------------------RAMAIK 218
+++ G ++ V F V Y+ LI CR G ++ A+ +K
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 219 SFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
M G P TY+ +++ C L++A+ L++EM+S G+ D ++Y+ L+ GL
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 279 NQLD----------------KAYMF------MVKK--ME-AKGLRDKV----------SY 303
D K YM+ M K+ ME AK L D + +Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 304 NTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRG 363
++IE +C+ R+ Y+L M++R I + T+ ++K G A ++ +M
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 364 MNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSE 423
P+ ++YTT+I ++ G A V +M EQGI PD+ YN+LI GL K+ R+ E
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 424 AMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI 482
A EM G P+ T+ I G ++ + A + +M E G +K + LI
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 179/414 (43%), Gaps = 60/414 (14%)
Query: 16 ISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGF 75
I+ K G + +A + M + Y + L ++ + D + +++M G
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 76 SLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGL 135
+ F+Y I+G + L NM K A +F +MV +G P+V+ Y +++ G
Sbjct: 624 APDVFSYGVLINGFSK----------LGNMQK-ASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 136 CKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL-TVGAMKGKVEFG 194
C++ E +KA + + M G+ P+ ++ G C G + A+ L +KG V
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-D 731
Query: 195 VLIYNALISGFCRTGRIRRAMAI---------------KSFMKW---------------- 223
+Y L+ G CR + RA+ I + + W
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 224 --NGC-----EPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLC 276
+G +P+ VTYN +++Y C E L+ A++L +M++ + P V +Y LL G
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 277 NSNQLDKAYMFMV-KKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRR----- 329
+ +A MF V + A G+ D + Y+ +I AF K G T +A L + M +
Sbjct: 852 KMGR--RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Query: 330 GIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
G +L + T L+ F + G +AEK++ M + PD +I+ C S
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 121/348 (34%), Gaps = 90/348 (25%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I+ K G + +A +FDEM + I YN +G R + + +M
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G TY I G C+ + A +F +M KG PD YT +
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAE-----------AFRLFDEMKLKGLVPDSFVYTTL 738
Query: 132 IDGLCKAKEFDKAV----------------------------------QAWEHMIENGI- 156
+DG C+ + ++A+ + +++
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 157 ---KPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRR 213
KP++ ++ LC +G ++ A EL + V+ Y +L++G+ + GR
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 214 AMAIKSFMKWNGCEPDLVTYNAILNYYCDE-------VMLDE------------------ 248
+ G EPD + Y+ I+N + E V++D+
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918
Query: 249 ---------------AEKLVMEMESCGIEPDVYSYNQLLKGLC-NSNQ 280
AEK++ M PD + +L+ C +SNQ
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 18/262 (6%)
Query: 225 GCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIE--PDVYSYNQLLKGLCNSNQLD 282
G D V + + + Y + ++EA + + S G+E P + LL L N+LD
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEA--VFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD 203
Query: 283 KAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILI 342
+ +E + D +Y+ +I A C+ G + + + E T +
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK---EFRTATLNV-- 258
Query: 343 KAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGIT 402
+G+ + E ++ + L P + Y +ID LCK + + A + ++M G++
Sbjct: 259 -----DGALKLKESMICK----GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVS 309
Query: 403 PDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRL 462
D +Y+ LI+GL K A L EM G + + I + +E +E A L
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 463 WDQMMEKGFTLDKTVSAALIEA 484
+D M+ G A+LIE
Sbjct: 370 FDGMIASGLIPQAQAYASLIEG 391
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 231/477 (48%), Gaps = 32/477 (6%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
+D A+ FD M +S ++D N+ IGV +R +R D+ Y++M L ++++
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKE---- 140
I C+ + +L F K+ G +PDVVT+ ++ GLC
Sbjct: 147 LIKCFCDCHKLSF-----------SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 141 -----------FDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
F +AV ++ M+E G+ P L+ GLC +G+V A L V M G
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL-VNKMVG 254
Query: 190 K-VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDE 248
K + V+ Y +++G C+ G + A+ + S M+ +PD+V Y+AI++ C + +
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 249 AEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIE 308
A+ L EM GI P+V++YN ++ G C+ + A + +E + D +++N +I
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 309 AFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSP 368
A K G+ A KL + M R I D VT+ +I F + A+ + + M SP
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SP 430
Query: 369 DRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLY 428
D + + TIID C+++ + + ++ +G+ + +YN LI+G C+ ++ A L+
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 429 EEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
+EM G PD +T +L+ G + +KLE A L++ + LD +I +
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 184/402 (45%), Gaps = 23/402 (5%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y ++ + K G A+++ +M +++ + + Y+ I L + Q+ + +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M G + FTY+ I G C ++ LL + M+ + PDV+T+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD-----------MIEREINPDVLTFN 370
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA---YELTVGA 186
+I K + +A + + M+ I PD +++ G C + D A ++L
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 187 MKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVML 246
V+ +N +I +CR R+ M + + G + TYN +++ +C+ L
Sbjct: 431 -------DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 247 DEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAY-MFMVKKMEAKGLRDKVSYNT 305
+ A+ L EM S G+ PD + N LL G C + +L++A +F V +M L D V+YN
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL-DTVAYNI 542
Query: 306 VIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMN 365
+I CKG + A+ LF + G+E DV T+ ++I F + + + A L ++M+
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 366 LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 407
PD Y T+I K+ EI + + +M G + D +
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 159/376 (42%), Gaps = 17/376 (4%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+IY A I L K G A ++F EM + YN I R+ Q +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M + T++ IS VK L +KL E+ H+ + PD VTY
Sbjct: 357 MIEREINPDVLTFNALISA--SVKEGKLF-----EAEKLCDEMLHRCIF----PDTVTYN 405
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+I G CK FD A +HM + PD ++ C +VD +L +
Sbjct: 406 SMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
+ YN LI GFC + A + M +G PD +T N +L +C+ L+EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVIE 308
+L ++ I+ D +YN ++ G+C +++D+A+ + G+ V +YN +I
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC-SLPIHGVEPDVQTYNVMIS 580
Query: 309 AFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSP 368
FC A LF M+ G E D T+ LI+ L+ G + +L+++MR S
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 369 DRILYTTIIDCLCKSR 384
D + D + R
Sbjct: 641 DAFTIKMVADLITDGR 656
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 16/280 (5%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y + I K D A H+FD M + + +N I V R R D ++
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMASPDV----VTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
+ G TY+ I G CEV N A ++F +M+S G PD +T
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNA-----------AQDLFQEMISHGVCPDTITCN 506
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
I++ G C+ ++ ++A++ +E + + I D A ++ G+C KVD A++L
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
VE V YN +ISGFC I A + MK NG EPD TYN ++ +D++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMV 289
+L+ EM S G D ++ +++ L +LDK++ M+
Sbjct: 627 IELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSFSDML 665
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 197/404 (48%), Gaps = 11/404 (2%)
Query: 47 YNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMD 106
YN I + +R D +M FS TY+ I LC
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL----------- 209
Query: 107 KLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAAL 166
LAL+V ++++S +P V+TYTI+I+ D+A++ + M+ G+KPD +
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 167 VVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGC 226
+ G+C +G VD A+E+ E V+ YN L+ G+ + + M C
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 227 EPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYM 286
+P++VTY+ ++ C + ++EA L+ M+ G+ PD YSY+ L+ C +LD A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 287 FMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL 346
F+ + L D V+YNTV+ CK G+ +A ++F + G + ++ + A
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 347 REGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVI 406
G A ++ +M + PD I Y ++I CLC+ + A+ + +DM P V+
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 407 SYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGL 450
+YN ++ G CK+ R+ +A+++ E M G P+E T+ +LI G+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 208/407 (51%), Gaps = 13/407 (3%)
Query: 80 FTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAK 139
F Y+ I+G C+ ++ +D A V +M SK PD VTY I+I LC
Sbjct: 159 FAYNALINGFCK----------MNRIDD-ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 140 EFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYN 199
+ D A++ ++ + +P L+ +G VD A +L + ++ + YN
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 200 ALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESC 259
+I G C+ G + RA + ++ GCEPD+++YN +L ++ +E EKL+ +M S
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 260 GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRR 318
+P+V +Y+ L+ LC ++++A M ++K M+ KGL D SY+ +I AFC+ G+
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEA-MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 319 AYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIID 378
A + E M G D+V + ++ + G + A ++ ++ + SP+ Y T+
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 379 CLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHP 438
L S + A + L+M+ GI PD I+YN++I+ LC+ V EA L +M+ HP
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 439 DEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
VT+ +++ G + ++E A + + M+ G ++T LIE I
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 203/447 (45%), Gaps = 13/447 (2%)
Query: 1 MIQKLGAQRLI-YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
+++K G + Y A I+ K ID A V D M + ++ YN IG L +
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
DL Q+ T TY+ I +L +D+ AL++ +M+S+
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEA----------TMLEGGVDE-ALKLMDEMLSR 257
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
G +PD+ TY +I G+CK D+A + ++ G +PD + L+ L GK +
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 180 YELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
+L K + V+ Y+ LI+ CR G+I AM + MK G PD +Y+ ++
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRD 299
+C E LD A + + M S G PD+ +YN +L LC + + D+A K E +
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 300 KVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLN 359
SYNT+ A G RA + M GI+ D +T+ +I REG A +LL
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 360 QMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSS 419
MR P + Y ++ CK+ I A V MV G P+ +Y LI G+ +
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Query: 420 RVSEAMHLYEEMQIRGAHPDEVTFKLL 446
+EAM L ++ +R E +FK L
Sbjct: 558 YRAEAMELANDL-VRIDAISEYSFKRL 583
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 9/354 (2%)
Query: 136 CKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFG- 194
C++ + +++ E M+ G PD C L+ G + A V M+ +FG
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA----VRVMEILEKFGQ 155
Query: 195 --VLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKL 252
V YNALI+GFC+ RI A + M+ PD VTYN ++ C LD A K+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 253 VMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFC 311
+ ++ S +P V +Y L++ +D+A M +M ++GL+ D +YNT+I C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM-DEMLSRGLKPDMFTYNTIIRGMC 274
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 371
K G RA+++ + +G E DV+++ IL++A L +G EKL+ +M P+ +
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEM 431
Y+ +I LC+ +I A + M E+G+TPD SY+ LI C+ R+ A+ E M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
G PD V + ++ L + K + A ++ ++ E G + + + + A+
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 347 REGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVI 406
R G+ + LL M +PD IL T +I R I A V ++++E+ PDV
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDVF 159
Query: 407 SYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQM 466
+YNALING CK +R+ +A + + M+ + PD VT+ ++IG L KL+LA ++ +Q+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 467 MEKGFTLDKTVSAALIEAIHLQDAANK 493
+ LIEA L+ ++
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDE 246
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 201 bits (512), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 236/477 (49%), Gaps = 17/477 (3%)
Query: 2 IQKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFD 61
I+ + R I R + NL + A+ +F M S ID+ R + V+ + +R+D
Sbjct: 45 IRAFSSYRKILRNGLHNLQ----FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYD 100
Query: 62 LVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGR 121
+V ++QM LG + P LC N + + L + A KM+ G
Sbjct: 101 VVISLFEQMQILG--IPPL--------LCTC-NIVMHCVCLSSQPCRASCFLGKMMKLGF 149
Query: 122 EPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYE 181
EPD+VT+T +++G C + A+ ++ ++ G KP+ L+ LC + ++ A E
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 182 LTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYC 241
L V+ YNAL++G C GR A + M EP+++T+ A+++ +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 242 DEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LRDK 300
L EA++L M + PDV++Y L+ GLC LD+A M ME G ++
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ-MFYLMERNGCYPNE 328
Query: 301 VSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQ 360
V Y T+I FCK + K+F M ++G+ + +T+T+LI+ + G +A+++ NQ
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 361 MRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSR 420
M PD Y ++D LC + ++ A +F M ++ + ++++Y +I G+CK +
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 421 VSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTV 477
V +A L+ + +G P+ +T+ +I G + + A L+ +M E GF +++V
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 183/377 (48%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
AL++F +MV P ++ +T ++ + K +D + +E M GI P C ++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
+C + A MK E ++ + +L++G+C RI A+A+ + G +P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM 288
++VTY ++ C L+ A +L +M + G P+V +YN L+ GLC + A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 289 VKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLRE 348
M+ + + +++ +I+AF K G+ A +L+ M + + DV T+ LI
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 349 GSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISY 408
G A ++ M P+ ++YTT+I CKS+ + +F +M ++G+ + I+Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 409 NALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMME 468
LI G C R A ++ +M R A PD T+ +L+ GL K+E A +++ M +
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 469 KGFTLDKTVSAALIEAI 485
+ ++ +I+ +
Sbjct: 427 REMDINIVTYTIIIQGM 443
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%)
Query: 267 SYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGM 326
SY ++L+ ++ Q + A + + ++ L + + ++ K + LFE M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 327 RRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREI 386
+ GI + T I++ A L +M + PD + +T++++ C I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 387 GTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLL 446
A +F ++ G P+V++Y LI LCK+ ++ A+ L+ +M G+ P+ VT+ L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 447 IGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
+ GL + + A L MM++ + ALI+A
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 238/469 (50%), Gaps = 16/469 (3%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
+Y I++ V++ ++ ++ F+EM + S +N + ++ S F+ ++ +
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE- 154
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTI 130
+ L +++ I G CE + + ++ ++ G P+VV YT
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEI-----------EKSFDLLIELTEFGFSPNVVIYTT 203
Query: 131 VIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGK 190
+IDG CK E +KA + M + G+ + + L+ GL +G +E+ +
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 191 VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAE 250
V + YN +++ C+ GR + A + M+ G ++VTYN ++ C E+ L+EA
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 251 KLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDK-VSYNTVIEA 309
K+V +M+S GI P++ +YN L+ G C +L KA + + + ++++GL V+YN ++
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA-LSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 310 FCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPD 369
FC+ G T A K+ + M RGI+ VT+TILI F R + A +L M + L PD
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 370 RILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYE 429
Y+ +I C ++ A +F MVE+ P+ + YN +I G CK A+ L +
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVS 478
EM+ + P+ +++ +I L +E+K + A RL ++M++ G +D + S
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG--IDPSTS 549
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 186/367 (50%), Gaps = 3/367 (0%)
Query: 128 YTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAM 187
Y ++I+ +++ + ++ + M++NG P + L+ + G + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF-FNEN 155
Query: 188 KGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLD 247
K KV V + LI G C G I ++ + + G P++V Y +++ C + ++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 248 EAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTV 306
+A+ L EM G+ + +Y L+ GL N + K M +KM+ G+ + +YN V
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLF-KNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 307 IEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNL 366
+ CK G+T+ A+++F+ MR RG+ ++VT+ LI RE A K+++QM+ +
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 367 SPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMH 426
+P+ I Y T+ID C ++G A + D+ +G++P +++YN L++G C+ S A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 427 LYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
+ +EM+ RG P +VT+ +LI + +E A +L M E G D + LI
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 487 LQDAANK 493
++ N+
Sbjct: 455 IKGQMNE 461
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 217/477 (45%), Gaps = 48/477 (10%)
Query: 52 GVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDK---- 107
G L H++ L+Q ++H F+ + + S + K F L +++++ +
Sbjct: 52 GNLFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTK-FRLYEVIINSYVQSQSL 110
Query: 108 -LALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKP--DNKACA 164
L++ F++MV G P + ++ + + F+ Q W EN K D +
Sbjct: 111 NLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFN---QWWSFFNENKSKVVLDVYSFG 167
Query: 165 ALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWN 224
L+ G C G+++ +++L + + V+IY LI G C+ G I +A + M
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 225 GCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA 284
G + TY ++N + + ++ +M+ G+ P++Y+YN ++ LC + A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 285 YMFMVKKMEAKGLR-DKVSYNTV-----------------------------------IE 308
+ + +M +G+ + V+YNT+ I+
Sbjct: 288 FQ-VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 309 AFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSP 368
FC G+ +A L ++ RG+ +VT+ IL+ F R+G ++ A K++ +M + P
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 369 DRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLY 428
++ YT +ID +S + A + L M E G+ PDV +Y+ LI+G C +++EA L+
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 429 EEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
+ M + P+EV + +I G +E A +L +M EK + +IE +
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 165/383 (43%), Gaps = 52/383 (13%)
Query: 4 KLG--AQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFD 61
KLG A Y I+ L K G+ Q ++++M + YN + L + R
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 62 LVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGR 121
+ +M G S TY+ I GLC N ++D M S G
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK-----------SDGI 334
Query: 122 EPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYE 181
P+++TY +IDG C + KA+ + G+ P
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS---------------------- 372
Query: 182 LTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYC 241
++ YN L+SGFCR G A + M+ G +P VTY +++ +
Sbjct: 373 -------------LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 242 DEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV 301
+++A +L + ME G+ PDV++Y+ L+ G C Q+++A +E ++V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 302 SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM 361
YNT+I +CK G + RA KL + M + + +V ++ +I+ +E S AE+L+ +M
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 362 RGMNLSPDRILYTTIIDCLCKSR 384
+ P T+I+ + +++
Sbjct: 540 IDSGIDPS----TSILSLISRAK 558
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 221/473 (46%), Gaps = 11/473 (2%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y + L +A I A V EMT+ I YN I I +
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 403
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M G SLT TY+ I G C+ N DN ++L E M+S G + ++T
Sbjct: 404 MVSKGLSLTSSTYNTLIKGYCK-------NGQADNAERLLKE----MLSIGFNVNQGSFT 452
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
VI LC FD A++ M+ + P L+ GLC GK A EL +
Sbjct: 453 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 512
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
NAL+ G C G++ A I+ + GC D V+YN +++ C + LDEA
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 572
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEA 309
+ EM G++PD Y+Y+ L+ GL N N++++A F L D +Y+ +I+
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Query: 310 FCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPD 369
CK +T + F+ M + ++ + V + LI+A+ R G +MA +L M+ +SP+
Sbjct: 633 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 692
Query: 370 RILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYE 429
YT++I + + A +F +M +G+ P+V Y ALI+G K ++ + L
Sbjct: 693 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 752
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI 482
EM + HP+++T+ ++IGG ++ + A RL ++M EKG D I
Sbjct: 753 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 805
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 214/447 (47%), Gaps = 17/447 (3%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
++Y I + ++AG +++A+ + D M + S YN I ++ + D + ++
Sbjct: 379 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 438
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M +GF++ +++ I LC +++ D+ AL +M+ + P T
Sbjct: 439 MLSIGFNVNQGSFTSVICLLCS-------HLMFDS----ALRFVGEMLLRNMSPGGGLLT 487
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+I GLCK + KA++ W + G D + AL+ GLC GK+D A+ + +
Sbjct: 488 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 547
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
+ YN LISG C ++ A M G +PD TY+ ++ C +++
Sbjct: 548 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---CGLFNMNKV 604
Query: 250 EKLVMEMESC---GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTV 306
E+ + + C G+ PDVY+Y+ ++ G C + + ++ F + M + V YN +
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664
Query: 307 IEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNL 366
I A+C+ G+ A +L E M+ +GI + T+T LIK A+ L +MR L
Sbjct: 665 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 724
Query: 367 SPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMH 426
P+ YT +ID K ++ + +M + + P+ I+Y +I G + V+EA
Sbjct: 725 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 784
Query: 427 LYEEMQIRGAHPDEVTFKLLIGGLVQE 453
L EM+ +G PD +T+K I G +++
Sbjct: 785 LLNEMREKGIVPDSITYKEFIYGYLKQ 811
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 186/376 (49%), Gaps = 3/376 (0%)
Query: 108 LALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
LAL+VF + +KG P T I++ L +A EF K +A++ ++ G+ PD +
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAI 280
Query: 168 VGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCE 227
C GKV+ A +L + V V+ +N +I G GR A K M G E
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340
Query: 228 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 287
P L+TY+ ++ + +A ++ EM G P+V YN L+ + L+KA +
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA-IE 399
Query: 288 MVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL 346
+ M +KGL +YNT+I+ +CK GQ A +L + M G ++ +FT +I
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 347 REGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVI 406
A + + +M N+SP L TT+I LCK + A ++ + +G D
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519
Query: 407 SYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQM 466
+ NAL++GLC++ ++ EA + +E+ RG D V++ LI G +KKL+ A D+M
Sbjct: 520 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 579
Query: 467 MEKGFTLDKTVSAALI 482
+++G D + LI
Sbjct: 580 VKRGLKPDNYTYSILI 595
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 215/507 (42%), Gaps = 53/507 (10%)
Query: 16 ISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRF---IGVLIRHSRFDLVQFYYQQMHP 72
+++LV+A + FD + C+ S D F I + + + + +M
Sbjct: 246 LTSLVRANEFQKCCEAFDVV----CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 301
Query: 73 LGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVI 132
G + T++ I GL + D+ A KMV +G EP ++TY+I++
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRY----------DE-AFMFKEKMVERGMEPTLITYSILV 350
Query: 133 DGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVE 192
GL +AK A + M + G P+ L+ G ++ A E+ + +
Sbjct: 351 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410
Query: 193 FGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKL 252
YN LI G+C+ G+ A + M G + ++ +++ C +M D A +
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470
Query: 253 VMEMESCGIEP-----------------------------------DVYSYNQLLKGLCN 277
V EM + P D + N LL GLC
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530
Query: 278 SNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVT 337
+ +LD+A+ + + + D+VSYNT+I C + A+ + M +RG++ D T
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590
Query: 338 FTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMV 397
++ILI A + + + + PD Y+ +ID CK+ F +M+
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650
Query: 398 EQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLE 457
+ + P+ + YN LI C+S R+S A+ L E+M+ +G P+ T+ LI G+ ++E
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 458 LACRLWDQMMEKGFTLDKTVSAALIEA 484
A L+++M +G + ALI+
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDG 737
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 159/335 (47%), Gaps = 13/335 (3%)
Query: 16 ISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGF 75
IS L K G +A+ ++ + V + N + L + D +++ G
Sbjct: 490 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 549
Query: 76 SLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGL 135
+ +Y+ ISG C K + LD +MV +G +PD TY+I+I GL
Sbjct: 550 VMDRVSYNTLISGCCGKKKLDEAFMFLD-----------EMVKRGLKPDNYTYSILICGL 598
Query: 136 CKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGV 195
+ ++A+Q W+ NG+ PD + ++ G C + + E M V+
Sbjct: 599 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 658
Query: 196 LIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVME 255
++YN LI +CR+GR+ A+ ++ MK G P+ TY +++ ++EA+ L E
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 256 MESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGG 314
M G+EP+V+ Y L+ G Q+ K ++++M +K + +K++Y +I + + G
Sbjct: 719 MRMEGLEPNVFHYTALIDGYGKLGQMVKVEC-LLREMHSKNVHPNKITYTVMIGGYARDG 777
Query: 315 QTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREG 349
A +L MR +GI D +T+ I +L++G
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 225 GCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA 284
G PD+ + +N +C ++EA KL +ME G+ P+V ++N ++ GL + D+A
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 285 YMFMVKKMEAKGLRDK-VSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIK 343
+MF +KM +G+ ++Y+ +++ + + AY + + M ++G +V+ + LI
Sbjct: 328 FMFK-EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 344 AFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITP 403
+F+ GS A ++ + M LS Y T+I CK+ + A + +M+ G
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446
Query: 404 DVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLW 463
+ S+ ++I LC A+ EM +R P LI GL + K A LW
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506
Query: 464 DQMMEKGFTLDKTVSAALIEAI 485
Q + KGF +D S AL+ +
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGL 528
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 15/310 (4%)
Query: 14 AQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPL 73
A + L +AG +D+A + E+ C + + YN I + D + +M
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 74 GFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL--ALEVFHKMVSKGREPDVVTYTIV 131
G +TYS I GL NM+K+ A++ + G PDV TY+++
Sbjct: 583 GLKPDNYTYSILICGLF-------------NMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 629
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
IDG CKA+ ++ + ++ M+ ++P+ L+ C G++ +A EL +
Sbjct: 630 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 689
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
Y +LI G R+ A + M+ G EP++ Y A+++ Y + + E
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 749
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
L+ EM S + P+ +Y ++ G + +A + + E + D ++Y I +
Sbjct: 750 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 809
Query: 312 KGGQTRRAYK 321
K G A+K
Sbjct: 810 KQGGVLEAFK 819
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 297 LRDKVSYNTVIEAFCKGGQTRR-----AYKLFEGMRRRGIELDVVTFTILIKAFLREGS- 350
+R K+S + +IE +C Q +R A +F + +G+ T IL+ + +R
Sbjct: 199 IRRKMS-DLLIEVYCT--QFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEF 255
Query: 351 SAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNA 410
E +G +SPD L+TT I+ CK ++ A +F M E G+ P+V+++N
Sbjct: 256 QKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT 313
Query: 411 LINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKG 470
+I+GL R EA E+M RG P +T+ +L+ GL + K++ A + +M +KG
Sbjct: 314 VIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 373
Query: 471 FTLDKTVSAALIEAIHLQDAANK 493
F + V LI++ + NK
Sbjct: 374 FPPNVIVYNNLIDSFIEAGSLNK 396
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 217/447 (48%), Gaps = 15/447 (3%)
Query: 26 DQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRF 85
+ A +F EM S +D+ R + R++ V ++ Q+M G S ++++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 86 ISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAV 145
I C + AL V KM+ G EP +VT+ ++ G C A
Sbjct: 113 IHCFCRCSRLSF-----------ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 146 QAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGF 205
M+++G +P+ L+ GLC +G++++A EL K + V+ YN L++G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 206 CRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDV 265
C +GR A + M PD+VT+ A+++ + + LDEA++L EM ++P+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 266 YSYNQLLKGLCNSNQL-DKAYMFMVKKMEAKG-LRDKVSYNTVIEAFCKGGQTRRAYKLF 323
+YN ++ GLC +L D F + M +KG + V+YNT+I FCK KLF
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDL--MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
+ M G D+ T+ LI + + G +A + M ++PD I + ++ LC +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
EI +A F DM E +++YN +I+GLCK+ +V +A L+ + + G PD T+
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 444 KLLIGGLVQEKKLELACRLWDQMMEKG 470
++I GL + A L +M E+G
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEG 486
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 182/378 (48%), Gaps = 37/378 (9%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
A +F +MV P +V +T ++ + ++ + + M GI D
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD--------- 105
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
Y T+ LI FCR R+ A+++ M G EP
Sbjct: 106 ----------LYSFTI----------------LIHCFCRCSRLSFALSVLGKMMKLGYEP 139
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM 288
+VT+ ++L+ +C + +A LV+ M G EP+V YN L+ GLC + +L+ A + +
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA-LEL 198
Query: 289 VKKMEAKGL-RDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLR 347
+ +ME KGL D V+YNT++ C G+ A ++ M +R I DVVTFT LI F++
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 348 EGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 407
+G+ A++L +M ++ P+ + Y +II+ LC + A F M +G P+V++
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 408 YNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMM 467
YN LI+G CK V E M L++ M G + D T+ LI G Q KL +A ++ M+
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 468 EKGFTLDKTVSAALIEAI 485
+ T D L+ +
Sbjct: 379 SRRVTPDIITHCILLHGL 396
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 163/376 (43%), Gaps = 24/376 (6%)
Query: 50 FIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVK---------------- 93
I R SR +M LG+ + T+ + G C V
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 94 ---NFTLINILLDNMDK-----LALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAV 145
N + N L+D + K +ALE+ ++M KG DVVTY ++ GLC + + A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 146 QAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGF 205
+ M++ I PD AL+ G +D A EL ++ V+ + YN++I+G
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 206 CRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDV 265
C GR+ A M GC P++VTYN +++ +C M+DE KL M G D+
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 266 YSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEG 325
++YN L+ G C +L A + + D +++ ++ C G+ A F+
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 326 MRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSRE 385
MR + +V + I+I + A +L ++ + PD YT +I LCK+
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 386 IGTAYGVFLDMVEQGI 401
A + M E+GI
Sbjct: 472 RREADELIRRMKEEGI 487
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 158/354 (44%), Gaps = 48/354 (13%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
++Y I L K G ++ A+ + +EM +
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKK------------------------------- 205
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
G TY+ ++GLC ++ A + M+ + PDVVT+T
Sbjct: 206 ----GLGADVVTYNTLLTGLCYSGRWS-----------DAARMLRDMMKRSINPDVVTFT 250
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKV-DLAYELTVGAMK 188
+ID K D+A + ++ MI++ + P+N +++ GLC G++ D + A K
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 189 GKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDE 248
G V+ YN LISGFC+ + M + M G D+ TYN +++ YC L
Sbjct: 311 GCFP-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 249 AEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIE 308
A + M S + PD+ ++ LL GLC + +++ A + E++ V+YN +I
Sbjct: 370 ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIH 429
Query: 309 AFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 362
CK + +A++LF + G++ D T+TI+I + G A++L+ +M+
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 240 YCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-R 298
+ + ++A L EM P + + +LL N + + ++ +KME G+
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFSQKMELYGISH 104
Query: 299 DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLL 358
D S+ +I FC+ + A + M + G E +VTF L+ F A L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 359 NQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKS 418
M P+ ++Y T+ID LCK+ E+ A + +M ++G+ DV++YN L+ GLC S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 419 SRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVS 478
R S+A + +M R +PD VTF LI V++ L+ A L+ +M++ +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 479 AALIEAI 485
++I +
Sbjct: 285 NSIINGL 291
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 48/330 (14%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
+ LGA + Y ++ L +G A + +M + + + + I V ++ D
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
Q Y++M TY+ I+GLC + L D A + F M SKG
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLC------MHGRLYD-----AKKTFDLMASKGCF 313
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
P+VVTY +I G CK + D+ ++ ++ M G D
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD----------------------- 350
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
+ YN LI G+C+ G++R A+ I +M PD++T+ +L+ C
Sbjct: 351 ------------IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKV 301
++ A +M + +YN ++ GLC +++++KA+ ++ +G++ D
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFC-RLPVEGVKPDAR 457
Query: 302 SYNTVIEAFCKGGQTRRAYKLFEGMRRRGI 331
+Y +I CK G R A +L M+ GI
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 11/280 (3%)
Query: 1 MIQKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRF 60
M + + + + A I VK G +D+A ++ EM QS+ ++ YN I L H R
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 61 DLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKG 120
+ + M G TY+ ISG C+ + M +++F +M +G
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR-----------MVDEGMKLFQRMSCEG 346
Query: 121 REPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAY 180
D+ TY +I G C+ + A+ + M+ + PD L+ GLC +G+++ A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 181 ELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYY 240
+ + G++ YN +I G C+ ++ +A + + G +PD TY ++
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 241 CDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQ 280
C EA++L+ M+ GI + + + L+ +SN+
Sbjct: 467 CKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNK 506
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 231/458 (50%), Gaps = 11/458 (2%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
YR ++ + + + + A+ +F +M +S+ +D++R + + + ++++ V ++ +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
LG S ++++ I C +L AL KM+ G EP +VT+ +
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSL-----------ALSCLGKMMKLGFEPSIVTFGSL 155
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
++G C F +A+ + ++ G +P+ ++ LC G+V+ A ++ K +
Sbjct: 156 VNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
V+ YN+LI+ +G + I S M G PD++T++A+++ Y E L EA+K
Sbjct: 216 RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK 275
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
EM + P++ +YN L+ GLC LD+A + + + V+YNT+I +C
Sbjct: 276 QYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC 335
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 371
K + K+ M R G++ D T+ L + + + G + AEK+L +M + PD
Sbjct: 336 KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEM 431
+ ++D LC +IG A D+ + +I+YN +I GLCK+ +V +A +L+ +
Sbjct: 396 TFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSL 455
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEK 469
++G PD +T+ ++ GL +++ A L+ +M ++
Sbjct: 456 ALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 173/378 (45%), Gaps = 37/378 (9%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
AL +F M P +V ++ ++ + K +++ + + H+ GI D
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHD--------- 113
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
Y T LI FCR R+ A++ M G EP
Sbjct: 114 ----------LYSFT----------------TLIDCFCRCARLSLALSCLGKMMKLGFEP 147
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM 288
+VT+ +++N +C EA LV ++ G EP+V YN ++ LC Q++ A + +
Sbjct: 148 SIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTA-LDV 206
Query: 289 VKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLR 347
+K M+ G+R D V+YN++I G + ++ M R GI DV+TF+ LI + +
Sbjct: 207 LKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGK 266
Query: 348 EGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 407
EG A+K N+M +++P+ + Y ++I+ LC + A V +V +G P+ ++
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 408 YNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMM 467
YN LING CK+ RV + M + M G D T+ L G Q K A ++ +M+
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 468 EKGFTLDKTVSAALIEAI 485
G D L++ +
Sbjct: 387 SCGVHPDMYTFNILLDGL 404
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKV 301
+ ++A L +M P + +++LL + N+ + A + + + +E G+ D
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYE-AVISLFRHLEMLGISHDLY 115
Query: 302 SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM 361
S+ T+I+ FC+ + A M + G E +VTF L+ F A L++Q+
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 362 RGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRV 421
G+ P+ ++Y TIID LC+ ++ TA V M + GI PDV++YN+LI L S
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 422 SEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAAL 481
+ + +M G PD +TF LI +E +L A + +++M+++ + +L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 482 IEA--IH-LQDAANK 493
I IH L D A K
Sbjct: 296 INGLCIHGLLDEAKK 310
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 146/320 (45%), Gaps = 13/320 (4%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+IY I +L + G ++ A+ V M + R + YN I L + +
Sbjct: 185 VIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSD 244
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYT 129
M +G S T+S I K L+ A + +++M+ + P++VTY
Sbjct: 245 MMRMGISPDVITFSALID--VYGKEGQLLE---------AKKQYNEMIQRSVNPNIVTYN 293
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+I+GLC D+A + ++ G P+ L+ G C +VD ++ +
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
Query: 190 KVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEA 249
V+ YN L G+C+ G+ A + M G PD+ T+N +L+ CD + +A
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIE 308
+ +++ + +YN ++KGLC +++++ A+ ++ + KG+ D ++Y T++
Sbjct: 414 LVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW-YLFCSLALKGVSPDVITYITMMI 472
Query: 309 AFCKGGQTRRAYKLFEGMRR 328
+ R A++L+ M++
Sbjct: 473 GLRRKRLWREAHELYRKMQK 492
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 11/286 (3%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y + I+ L +G + + +M + I ++ I V + + + Y +M
Sbjct: 222 YNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMI 281
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
+ TY+ I+GLC I+ LLD K V + +VSKG P+ VTY +
Sbjct: 282 QRSVNPNIVTYNSLINGLC-------IHGLLDEAKK----VLNVLVSKGFFPNAVTYNTL 330
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
I+G CKAK D ++ M +G+ D L G C GK A ++ + V
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
+ +N L+ G C G+I +A+ ++ + ++TYN I+ C +++A
Sbjct: 391 HPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWY 450
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL 297
L + G+ PDV +Y ++ GL +A+ K + GL
Sbjct: 451 LFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGL 496
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%)
Query: 268 YNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMR 327
Y + L+ +S + + A E+ L V ++ ++ A K + LF +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 328 RRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIG 387
GI D+ +FT LI F R ++A L +M + P + + ++++ C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 388 TAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLI 447
A + +V G P+V+ YN +I+ LC+ +V+ A+ + + M+ G PD VT+ LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 448 GGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIE 483
L ++ R+ MM G + D +ALI+
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 243/489 (49%), Gaps = 29/489 (5%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
YR + N + + ++A+ +F M +S ID+ + + V+ + +FD+V +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL----------------------- 108
+G S +T + ++ C+ L + L M KL
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 109 -ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
A+ + ++MV G +PDVV YT +ID LCK + A+ ++ M GI+PD +LV
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 168 VGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCE 227
GLC G+ A L G K K++ V+ +NALI F + G+ A + + M
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 228 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 287
P++ TY +++N +C E +DEA ++ ME+ G PDV +Y L+ G C ++D A M
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA-MK 338
Query: 288 MVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL 346
+ +M KGL + ++Y T+I+ F + G+ A ++F M RG+ ++ T+ +L+
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 347 REGSSAMAEKLLNQM--RGMN-LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITP 403
G A + M R M+ ++P+ Y ++ LC + ++ A VF DM ++ +
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 404 DVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLW 463
+I+Y +I G+CK+ +V A++L+ + +G P+ VT+ +I GL +E A L+
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 464 DQMMEKGFT 472
+M E G +
Sbjct: 519 RKMKEDGVS 527
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 133/262 (50%), Gaps = 2/262 (0%)
Query: 225 GCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA 284
G DL T N ++N +C A + +M G EPD+ ++ L+ G C N++++A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 285 YMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIK 343
M MV +M G++ D V Y T+I++ CK G A LF+ M GI DVV +T L+
Sbjct: 162 -MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 344 AFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITP 403
G A+ LL M + PD I + +ID K + A ++ +M+ I P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 404 DVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLW 463
++ +Y +LING C V EA ++ M+ +G PD V + LI G + KK++ A +++
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 464 DQMMEKGFTLDKTVSAALIEAI 485
+M +KG T + LI+
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGF 362
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 194/407 (47%), Gaps = 18/407 (4%)
Query: 2 IQKLGAQRLI--YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR 59
+ KLG + I + + I+ +++A+ + ++M + + + Y I L ++
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 60 FDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSK 119
+ + QM G Y+ ++GLC + + LL M K +
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI--------- 243
Query: 120 GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 179
+PDV+T+ +ID K +F A + + MI I P+ +L+ G C +G VD A
Sbjct: 244 --KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 180 YELTVGAMKGKVEFG-VLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILN 238
++ M+ K F V+ Y +LI+GFC+ ++ AM I M G + +TY ++
Sbjct: 302 RQMFY-LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 239 YYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM--VKKMEAKG 296
+ + A+++ M S G+ P++ +YN LL LC + ++ KA M ++K E G
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420
Query: 297 LRDKV-SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAE 355
+ + +YN ++ C G+ +A +FE MR+R +++ ++T+TI+I+ + G A
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 356 KLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGIT 402
L + + P+ + YTT+I L + A+ +F M E G++
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 2/263 (0%)
Query: 232 TYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKK 291
Y IL + +EA L M P + + +LL + + D + +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFD-VVINLCDH 97
Query: 292 MEAKGL-RDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGS 350
++ G+ D + N ++ FC+ Q A M + G E D+VTFT LI F
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 351 SAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNA 410
A ++NQM M + PD ++YTTIID LCK+ + A +F M GI PDV+ Y +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 411 LINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKG 470
L+NGLC S R +A L M R PD +TF LI V+E K A L+++M+
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 471 FTLDKTVSAALIEAIHLQDAANK 493
+ +LI ++ ++
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDE 300
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 239/521 (45%), Gaps = 67/521 (12%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
+Y + N + G + +AV+VF+ M +C YN + VL+ FD Y +M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 71 HPLGFSLTPFTYS------------------RFISGL----CEV---------------- 92
G +TP YS R ++ + CE+
Sbjct: 138 RDRG--ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 93 ---KNFTLINILLDNMDKLALEVFHKM--------------------VSKGREPDVVTYT 129
+ + L +L + L L F+K+ + +G P++ TY
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 130 IVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKG 189
+ I GLC+ E D AV+ +IE G KPD L+ GLC + K A E+ +G M
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA-EVYLGKMVN 314
Query: 190 K-VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDE 248
+ +E YN LI+G+C+ G ++ A I +NG PD TY ++++ C E +
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 249 AEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVI 307
A L E GI+P+V YN L+KGL N + +A + +M KGL +V ++N ++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ-LANEMSEKGLIPEVQTFNILV 433
Query: 308 EAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLS 367
CK G A L + M +G D+ TF ILI + + A ++L+ M +
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
PD Y ++++ LCK+ + + MVE+G P++ ++N L+ LC+ ++ EA+ L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMME 468
EEM+ + +PD VTF LI G + L+ A L+ +M E
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 218/472 (46%), Gaps = 12/472 (2%)
Query: 19 LVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLT 78
L K G + + + D++ + YN FI L + D + G
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 79 PFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKA 138
TY+ I GLC+ F + L KMV++G EPD TY +I G CK
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLG-----------KMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 139 KEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIY 198
A + + NG PD +L+ GLC +G+ + A L A+ ++ V++Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 199 NALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMES 258
N LI G G I A + + M G P++ T+N ++N C + +A+ LV M S
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 259 CGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRR 318
G PD++++N L+ G +++ A + ++ D +YN+++ CK +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 319 AYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIID 378
+ ++ M +G ++ TF IL+++ R A LL +M+ +++PD + + T+ID
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 379 CLCKSREIGTAYGVFLDMVEQ-GITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAH 437
CK+ ++ AY +F M E ++ +YN +I+ + V+ A L++EM R
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Query: 438 PDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQD 489
PD T++L++ G + + L + +MME GF T +I + ++D
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 193/456 (42%), Gaps = 60/456 (13%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I L + G +D AV + + + + I YN I L ++S+F + Y +M
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 72 PLGFSLTPFTYSRFISGLCE-------------------VKNFTLINILLDNM-----DK 107
G +TY+ I+G C+ V + L+D +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 108 LALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALV 167
AL +F++ + KG +P+V+ Y +I GL +A Q M E G+ P+ + LV
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 168 VGLC-------GDG----------------------------KVDLAYELTVGAMKGKVE 192
GLC DG K++ A E+ + V+
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 193 FGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKL 252
V YN+L++G C+T + M M GC P+L T+N +L C LDEA L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 253 VMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVIEAFC 311
+ EM++ + PD ++ L+ G C + LD AY K EA + +YN +I AF
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 371
+ A KLF+ M R + D T+ +++ F + G+ + K L +M P
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 407
+I+CLC + A G+ MV++G+ P+ ++
Sbjct: 674 TLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 153/298 (51%), Gaps = 2/298 (0%)
Query: 197 IYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEM 256
+Y + + R G+++ A+ + M + CEP + +YNAI++ D D+A K+ M M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 257 ESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQ 315
GI PDVYS+ +K C +++ A + ++ M ++G + V+Y TV+ F +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSR-PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 316 TRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTT 375
Y+LF M G+ L + TF L++ ++G EKLL+++ + P+ Y
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 376 IIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRG 435
I LC+ E+ A + ++EQG PDVI+YN LI GLCK+S+ EA +M G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 436 AHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDAANK 493
PD T+ LI G + ++LA R+ + GF D+ +LI+ + + N+
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 161/363 (44%), Gaps = 35/363 (9%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
A+ VF +M EP V +Y ++ L + FD+A + + M + GI PD
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD--------- 145
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
Y T+ + FC+T R A+ + + M GCE
Sbjct: 146 ----------VYSFTI----------------RMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM 288
++V Y ++ + +E E +L +M + G+ + ++N+LL+ LC + + +
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 289 VKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLRE 348
K ++ L + +YN I+ C+ G+ A ++ + +G + DV+T+ LI +
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 349 GSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISY 408
AE L +M L PD Y T+I CK + A + D V G PD +Y
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 409 NALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMME 468
+LI+GLC + A+ L+ E +G P+ + + LI GL + + A +L ++M E
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 469 KGF 471
KG
Sbjct: 420 KGL 422
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 226/474 (47%), Gaps = 11/474 (2%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I+ K G D+A + EM + YN I L + D M
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G TY+ + G C K A+ KM S G EPDVVTY+++
Sbjct: 259 KNGVMPDCMTYNSILHGYCS-----------SGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
+D LCK +A + ++ M + G+KP+ L+ G G + + L ++ +
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
+++ LI + + G++ +AM + S M+ G P+ VTY A++ C +++A
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
+M G+ P YN L+ GLC N+ ++A +++ ++ + + +N++I++ C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 371
K G+ + KLFE M R G++ +V+T+ LI + G A KLL+ M + L P+ +
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEM 431
Y+T+I+ CK + A +F +M G++PD+I+YN ++ GL ++ R + A LY +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
G + T+ +++ GL + K + A +++ + L+ +I+A+
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 231/518 (44%), Gaps = 65/518 (12%)
Query: 21 KAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRF-DLVQFYYQQMHPLGFSLTP 79
+AG +D + + RV +I + + L R D + ++M LG
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 80 FTYSRFISGLCE--------------------------VKNFTLINILLDNMDK-LALEV 112
F+Y+ + GLC+ V T+IN D A
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 113 FHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCG 172
+H+M+ +G PDVVTY +I LCKA+ DKA++ M++NG+ PD +++ G C
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 173 DGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVT 232
G+ A VE V+ Y+ L+ C+ GR A I M G +P++ T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 233 YNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 292
Y +L Y + L E L+ M GI PD Y ++ L+ ++D+A M + KM
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA-MLVFSKM 397
Query: 293 EAKGLR-DKVSYNTVIEAFCKGGQTR---------------------------------- 317
+GL + V+Y VI CK G+
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 318 -RAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTI 376
RA +L M RGI L+ + F +I + +EG +EKL M + + P+ I Y T+
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 377 IDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGA 436
I+ C + ++ A + MV G+ P+ ++Y+ LING CK SR+ +A+ L++EM+ G
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 437 HPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLD 474
PD +T+ +++ GL Q ++ A L+ ++ E G ++
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 220/466 (47%), Gaps = 19/466 (4%)
Query: 26 DQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTP--FTYS 83
+ A HVFDE+ + NR + + R S V Y + +TP TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 84 RFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDK 143
I C L ++ KG D + +T ++ GLC K
Sbjct: 92 ILIGCCCRAGRL-----------DLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 144 AVQ-AWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL---TVGAMKGKVEFGVLIYN 199
A+ M E G P+ + L+ GLC + + A EL G V+ Y
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 200 ALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESC 259
+I+GF + G +A + M G PD+VTYN+I+ C +D+A +++ M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 260 GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRR 318
G+ PD +YN +L G C+S Q +A F+ KKM + G+ D V+Y+ +++ CK G+
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFL-KKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 319 AYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIID 378
A K+F+ M +RG++ ++ T+ L++ + +G+ LL+ M + PD +++ +I
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 379 CLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHP 438
K ++ A VF M +QG+ P+ ++Y A+I LCKS RV +AM +E+M G P
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 439 DEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
+ + LI GL K E A L +M+++G L+ ++I++
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 194/387 (50%), Gaps = 13/387 (3%)
Query: 109 ALEVFHKMVSKGRE---PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAA 165
A+ +++M G + PD+ TY I+I C+A D A ++I+ G + D A
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 166 LVVGLCGDGKVDLAYELTVGAMKGKVEFG----VLIYNALISGFCRTGRIRRAMAIKSFM 221
L+ GLC D + A ++ + M E G V YN L+ G C R + A+ + M
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRM---TELGCIPNVFSYNILLKGLCDENRSQEALELLHMM 184
Query: 222 ---KWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNS 278
+ G PD+V+Y ++N + E D+A EM GI PDV +YN ++ LC +
Sbjct: 185 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244
Query: 279 NQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTF 338
+DKA + ++ + D ++YN+++ +C GQ + A + MR G+E DVVT+
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 339 TILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVE 398
++L+ + G A K+ + M L P+ Y T++ + +G+ MV
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 399 QGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLEL 458
GI PD ++ LI K +V +AM ++ +M+ +G +P+ VT+ +IG L + ++E
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 459 ACRLWDQMMEKGFTLDKTVSAALIEAI 485
A ++QM+++G + V +LI +
Sbjct: 425 AMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 190/376 (50%), Gaps = 2/376 (0%)
Query: 109 ALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVV 168
A+ VF KM +G P+ VTY VI LCK+ + A+ +E MI+ G+ P N +L+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 169 GLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEP 228
GLC K + A EL + + + + +N++I C+ GR+ + + M G +P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 229 DLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFM 288
+++TYN ++N YC +DEA KL+ M S G++P+ +Y+ L+ G C ++++ A + +
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA-LVL 568
Query: 289 VKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLR 347
K+ME+ G+ D ++YN +++ + +T A +L+ + G ++++ T+ I++ +
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 348 EGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 407
+ A ++ + M+L + + +ID L K A +F+ G+ P+ +
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 408 YNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMM 467
Y + + + E L+ M+ G D ++ L+Q ++ A +
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMID 748
Query: 468 EKGFTLDKTVSAALIE 483
EK F+L+ + ++ I+
Sbjct: 749 EKHFSLEASTASLFID 764
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 185/395 (46%), Gaps = 24/395 (6%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
++ I K G +DQA+ VF +M Q ++ Y IG+L + R + Y++QM
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTI 130
G S Y+ I GLC + + A E+ +M+ +G + + +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKW-----------ERAEELILEMLDRGICLNTIFFNS 481
Query: 131 VIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGK 190
+ID CK ++ + +E M+ G+KP+ L+ G C GK+D A +L G +
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 191 VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAE 250
++ + Y+ LI+G+C+ R+ A+ + M+ +G PD++TYN IL A+
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 251 KLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAY-MF-----MVKKMEAKGLRDKVSYN 304
+L + + G + ++ +YN +L GLC + D A MF M K+EA+ ++N
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEAR------TFN 655
Query: 305 TVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGM 364
+I+A K G+ A LF G+ + T+ ++ + + +G ++L M
Sbjct: 656 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715
Query: 365 NLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQ 399
+ D + I+ L + EI T G +L M+++
Sbjct: 716 GCTVDSGMLNFIVRELLQRGEI-TRAGTYLSMIDE 749
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 319 AYKLFEGMRRRG---IELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTT 375
A + M R G + D+ T+ ILI R G + L + D I +T
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 376 IIDCLCKSREIGTAYGVFLD-MVEQGITPDVISYNALINGLCKSSRVSEAM---HLYEEM 431
++ LC + A + L M E G P+V SYN L+ GLC +R EA+ H+ +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDAA 491
+ G+ PD V++ +I G +E + A + +M+++G D ++I A+ A
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 492 NK 493
+K
Sbjct: 248 DK 249
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 231/461 (50%), Gaps = 11/461 (2%)
Query: 25 IDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
+D A+ +F M QS I++++ + + + ++FDLV + ++M LG S +TY+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
I+ C +L LL M KL G EPD+VT +++G C A
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKL-----------GYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
V + M+E G KPD L+ GL K A L ++ + ++ Y A+++G
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
C+ G A+ + + M+ E ++V Y+ +++ C D+A L EME+ G+ P+
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFE 324
V +Y+ L+ LCN + A + +E K + V+++ +I+AF K G+ +A KL+E
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 325 GMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSR 384
M +R I+ ++ T++ LI F A+++L M + P+ + Y T+I+ CK++
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 385 EIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFK 444
+ +F +M ++G+ + ++Y LI+G ++ A ++++M G HP+ +T+
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467
Query: 445 LLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
+L+ GL + KL A +++ + D +IE +
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 159/306 (51%), Gaps = 1/306 (0%)
Query: 185 GAMKGKVEFGVLI-YNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDE 243
G M F +I ++ L+S + + ++ M+ G +L TYN ++N +C
Sbjct: 67 GVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRC 126
Query: 244 VMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSY 303
L A L+ +M G EPD+ + N LL G C+ N++ A + + +E D V++
Sbjct: 127 SRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF 186
Query: 304 NTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRG 363
T+I + A L + M +RG + D+VT+ ++ + G + +A LLN+M
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
Query: 364 MNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSE 423
+ + ++Y+T+ID LCK R A +F +M +G+ P+VI+Y++LI+ LC R S+
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD 306
Query: 424 AMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIE 483
A L +M R +P+ VTF LI V++ KL A +L+++M+++ + ++LI
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 484 AIHLQD 489
+ D
Sbjct: 367 GFCMLD 372
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 156/329 (47%), Gaps = 13/329 (3%)
Query: 27 QAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFI 86
+AV + D M Q C+ + Y + L + DL +M YS I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 87 SGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQ 146
LC+ ++ + AL +F +M +KG P+V+TY+ +I LC + A +
Sbjct: 261 DSLCKYRH-----------EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 147 AWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFC 206
MIE I P+ +AL+ GK+ A +L +K ++ + Y++LI+GFC
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 207 RTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVY 266
R+ A + M C P++VTYN ++N +C +D+ +L EM G+ +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 267 SYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTVIEAFCKGGQTRRAYKLFEG 325
+Y L+ G + D A M + K+M + G+ + +YN +++ CK G+ +A +FE
Sbjct: 430 TYTTLIHGFFQARDCDNAQM-VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 326 MRRRGIELDVVTFTILIKAFLREGSSAMA 354
++R +E D+ T+ I+I+ + G M
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 14/317 (4%)
Query: 1 MIQKLGAQR--LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHS 58
M+Q+ G Q + Y A ++ L K G D A+++ ++M + + Y+ I L ++
Sbjct: 209 MVQR-GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 59 RFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVS 118
D + +M G TYS IS LC ++ + LL + M+
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD-----------MIE 316
Query: 119 KGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDL 178
+ P++VT++ +ID K + KA + +E MI+ I P+ ++L+ G C ++
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 179 AYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILN 238
A ++ ++ V+ YN LI+GFC+ R+ + M + M G + VTY +++
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 239 YYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR 298
+ D A+ + +M S G+ P++ +YN LL GLC + +L KA + +
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 299 DKVSYNTVIEAFCKGGQ 315
D +YN +IE CK G+
Sbjct: 497 DIYTYNIMIEGMCKAGK 513
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 4/231 (1%)
Query: 266 YSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEG 325
Y Y ++L+ + +LD A +++ + ++ ++ A K + E
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 326 MRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSRE 385
M GI ++ T+ ILI F R ++A LL +M + PD + ++++ C
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 386 IGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKL 445
I A + MVE G PD +++ LI+GL ++ SEA+ L + M RG PD VT+
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 446 LIGGLVQEKKLELACRLWDQM----MEKGFTLDKTVSAALIEAIHLQDAAN 492
++ GL + +LA L ++M +E + TV +L + H DA N
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%)
Query: 368 PDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 427
P I ++ ++ + K + M GI+ ++ +YN LIN C+ SR+S A+ L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 428 YEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHL 487
+M G PD VT L+ G ++ A L DQM+E G+ D LI + L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 488 QDAANK 493
+ A++
Sbjct: 196 HNKASE 201
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 223/507 (43%), Gaps = 46/507 (9%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I KAG++ +F + ++ + ++ I V ++ Y++M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G S TY+ I GLC+ D A ++ +++ +G EP +VTY+ +
Sbjct: 384 CQGISPNVVTYTILIKGLCQ-----------DGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
IDG CK +E MI+ G PD LV GL G + A +V + +
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
V+++N+LI G+CR R A+ + M G +PD+ T+ ++ E L+EA
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNS--------------------------------- 278
L M G+EPD +Y L+ C
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 279 --NQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVV 336
++++ A F +E K D V+YNT+I +C + A ++FE ++ + V
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 337 TFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDM 396
T TILI + A ++ + M P+ + Y ++D KS +I ++ +F +M
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 397 VEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKL 456
E+GI+P ++SY+ +I+GLCK RV EA +++ + PD V + +LI G + +L
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 457 ELACRLWDQMMEKGFTLDKTVSAALIE 483
A L++ M+ G D + AL E
Sbjct: 793 VEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 231/544 (42%), Gaps = 94/544 (17%)
Query: 21 KAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM-----HPLGF 75
+ G++D+A+ +F TQ + R + LI R DL+ ++ ++ P G
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217
Query: 76 SLTPFTY-SRFISG----------LCEVKNFTL----INILLDNMDKLALEVFHKMVSK- 119
S F + F G L + F + N +L + +EV +++S
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLV 277
Query: 120 ---GREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKV 176
G P+VVT+ +I+G CK E D+A ++ M + GI+PD A + L+ G G +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 177 DLAYELTVGAMKGKVEFGVLI-----------------------------------YNAL 201
+ ++L A+ V+ V++ Y L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 202 ISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGI 261
I G C+ GRI A + + G EP +VTY+++++ +C L L +M G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 262 EPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYK 321
PDV Y L+ GL + A F VK + + V +N++I+ +C+ + A K
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 322 LFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLC 381
+F M GI+ DV TFT +++ + EG A L +M M L PD + Y T+ID C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 382 KS-----------------------------------REIGTAYGVFLDMVEQGITPDVI 406
K I A F +++E + PD++
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 407 SYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQM 466
+YN +I G C R+ EA ++E +++ P+ VT +LI L + ++ A R++ M
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 467 MEKG 470
EKG
Sbjct: 698 AEKG 701
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 198/419 (47%), Gaps = 43/419 (10%)
Query: 96 TLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENG 155
L+ + L++ AL+ F G++P T V L + FD A + ++ MI N
Sbjct: 73 NLVLLSLESEPNSALKYFRWAEISGKDPSFYTIAHV---LIRNGMFDVADKVFDEMITNR 129
Query: 156 IKP------------DNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLI------ 197
K D C L+ C G VD A E+ V + + GV+I
Sbjct: 130 GKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYS----TQLGVVIPQDSVY 185
Query: 198 --YNALISGFCRTGRIRRAMAIKSFMKW--NGCEPDLVTYNAIL--NYYCDEVMLD--EA 249
N+LI G R + F K G EP V+ + + +C + +
Sbjct: 186 RMLNSLI------GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDF 239
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEA 309
+LVME G + S N++LKGL + +Q++ A + ++ + V++ T+I
Sbjct: 240 HRLVMER---GFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 310 FCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPD 369
FCK G+ RA+ LF+ M +RGIE D++ ++ LI + + G M KL +Q + D
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 370 RILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYE 429
+++++ ID KS ++ TA V+ M+ QGI+P+V++Y LI GLC+ R+ EA +Y
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQ 488
++ RG P VT+ LI G + L L++ M++ G+ D + L++ + Q
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 221/509 (43%), Gaps = 85/509 (16%)
Query: 19 LVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGF--- 75
L++ G+ D A VFDEM + + D+N + R D+ +F + G
Sbjct: 109 LIRNGMFDVADKVFDEMITNRGK----DFNVLGSIRDRSLDADVCKFLMECCCRYGMVDK 164
Query: 76 SLTPFTYSRFISGLCEVKN-FTLINILL--DNMDKLALEVFHKMVSKGREPDVVT-YTIV 131
+L F YS + + + + ++N L+ D +D +A + F K+ G EP V+ + V
Sbjct: 165 ALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPSGVSAHGFV 223
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
+D L E KA+ ++E G + +C ++ GL D
Sbjct: 224 LDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD------------------ 265
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
+I A + S + G P++VT+ ++N +C +D A
Sbjct: 266 ------------------QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAF 310
L ME GIEPD+ +Y+ L+ G + L + + + KG++ D V +++ I+ +
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH-KGVKLDVVVFSSTIDVY 366
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
K G A +++ M +GI +VVT+TILIK ++G A + Q+ + P
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISY---------------------- 408
+ Y+++ID CK + + + ++ DM++ G PDV+ Y
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 409 -------------NALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKK 455
N+LI+G C+ +R EA+ ++ M I G PD TF ++ + E +
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 456 LELACRLWDQMMEKGFTLDKTVSAALIEA 484
LE A L+ +M + G D LI+A
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 190/463 (41%), Gaps = 63/463 (13%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+++ + I VK+G + A V+ M + Y I L + R Y Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNF-------------------TLINILLDNMDKLAL 110
+ G + TYS I G C+ N + +L+D + K L
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 111 EVFH------KMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACA 164
+ H KM+ + +VV + +IDG C+ FD+A++ + M GIKPD
Sbjct: 477 -MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 165 ALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWN 224
++ +G+++ A L K +E L Y LI FC+ + + + M+ N
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 225 GC-----------------------------------EPDLVTYNAILNYYCDEVMLDEA 249
EPD+VTYN ++ YC LDEA
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 250 EKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIE 308
E++ ++ P+ + L+ LC +N +D A + M M KG + + V+Y +++
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA-IRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 309 AFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSP 368
F K ++KLFE M+ +GI +V+++I+I + G A + +Q L P
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 369 DRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNAL 411
D + Y +I CK + A ++ M+ G+ PD + AL
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 11/237 (4%)
Query: 3 QKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDL 62
K+ A + I L K I+ A F+ + + + YN I R D
Sbjct: 595 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 654
Query: 63 VQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGRE 122
+ ++ + F T + I LC KN ++MD A+ +F M KG +
Sbjct: 655 AERIFELLKVTPFGPNTVTLTILIHVLC--KN--------NDMDG-AIRMFSIMAEKGSK 703
Query: 123 PDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 182
P+ VTY ++D K+ + + + + +E M E GI P + + ++ GLC G+VD A +
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 183 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNY 239
A+ K+ V+ Y LI G+C+ GR+ A + M NG +PD + A+ Y
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEY 820
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 218/454 (48%), Gaps = 18/454 (3%)
Query: 16 ISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQF-YYQQMHPLG 74
IS K G+ ++AV F M + +CR YN + V++R F ++ F Y +M
Sbjct: 134 ISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCN 193
Query: 75 FSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDG 134
S +T+ + GL + A ++F M +G P+ VTYTI+I G
Sbjct: 194 CSPNLYTFGILMDGLYK-----------KGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 135 LCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFG 194
LC+ D A + + M +G PD+ A AL+ G C G++ A+EL K G
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302
Query: 195 VLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVM 254
+ Y++LI G R R +A + + M +PD++ Y ++ +++A KL+
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 255 EMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGG 314
M S GI PD Y YN ++K LC L++ ++ E + D ++ +I + C+ G
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Query: 315 QTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM---RGMNLSPDRI 371
R A ++F + + G V TF LI + G A LL++M R +L R+
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL-RL 481
Query: 372 LYT--TIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYE 429
++ D + +S I AY + G +PD++SYN LING C++ + A+ L
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 430 EMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLW 463
+Q++G PD VT+ LI GL + + E A +L+
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 8/372 (2%)
Query: 103 DNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKA 162
DN L + ++ S G D + ++I K +KAV+++ M E +PD
Sbjct: 105 DNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFT 164
Query: 163 CAALV-VGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFM 221
++ V + + LA+ + +K + + L+ G + GR A + M
Sbjct: 165 YNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM 224
Query: 222 KWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQL 281
G P+ VTY +++ C D+A KL EM++ G PD ++N LL G C ++
Sbjct: 225 TGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRM 284
Query: 282 DKAYMFMV---KKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTF 338
+A+ + K GLR Y+++I+ + + +A++L+ M ++ I+ D++ +
Sbjct: 285 VEAFELLRLFEKDGFVLGLR---GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILY 341
Query: 339 TILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVE 398
TILI+ + G A KLL+ M +SPD Y +I LC + + L+M E
Sbjct: 342 TILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE 401
Query: 399 QGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLEL 458
PD ++ LI +C++ V EA ++ E++ G P TF LI GL + +L+
Sbjct: 402 TESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKE 461
Query: 459 ACRLWDQMMEKG 470
A RL ME G
Sbjct: 462 A-RLLLHKMEVG 472
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 193/465 (41%), Gaps = 54/465 (11%)
Query: 65 FYYQQMHPL---GFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGR 121
Y+Q + L G S+ + + IS ++ M + A+E F +M
Sbjct: 110 LYWQTLEELKSGGVSVDSYCFCVLISAYAKM-----------GMAEKAVESFGRMKEFDC 158
Query: 122 EPDVVTYTIVIDGLCKAKEFDK-AVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAY 180
PDV TY +++ + + + F A + M++ P+ L+ GL G+ A
Sbjct: 159 RPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQ 218
Query: 181 ELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYY 240
++ + + Y LISG C+ G A + M+ +G PD V +NA+L+ +
Sbjct: 219 KMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGF 278
Query: 241 CDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDK 300
C + EA +L+ E G + Y+ L+ GL + + +A+ ++ D
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 301 VSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQ 360
+ Y +I+ K G+ A KL M +GI D + +IKA G L +
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 361 MRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSR 420
M PD +T +I +C++ + A +F ++ + G +P V ++NALI+GLCKS
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 421 VSEAMHLYEEMQI---------------------------------------RGAHPDEV 441
+ EA L +M++ G+ PD V
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 442 TFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIH 486
++ +LI G + ++ A +L + + KG + D LI +H
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLH 563
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 159/363 (43%), Gaps = 9/363 (2%)
Query: 128 YTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAM 187
+ +VID L + D Q E + G+ D+ L+ G + A E + G M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVE-SFGRM 153
Query: 188 KGKVEFG----VLIYNALISGFCRTGRI-RRAMAIKSFMKWNGCEPDLVTYNAILNYYCD 242
K EF V YN ++ R A A+ + M C P+L T+ +++
Sbjct: 154 K---EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 243 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVS 302
+ +A+K+ +M GI P+ +Y L+ GLC D A + + D V+
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 303 YNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 362
+N +++ FCK G+ A++L + G L + ++ LI R A +L M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 363 GMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVS 422
N+ PD ILYT +I L K+ +I A + M +GI+PD YNA+I LC +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 423 EAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI 482
E L EM + PD T +LI + + + A ++ ++ + G + ALI
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 483 EAI 485
+ +
Sbjct: 451 DGL 453
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 227/559 (40%), Gaps = 117/559 (20%)
Query: 5 LGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSR----F 60
+ R+ Y IS L + G D A +F EM S S+ +N + + R F
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 61 DLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKG 120
+L++ + + GF L YS I GL + +T A E++ M+ K
Sbjct: 289 ELLRLFEKD----GFVLGLRGYSSLIDGLFRARRYTQ-----------AFELYANMLKKN 333
Query: 121 REPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCG-------- 172
+PD++ YTI+I GL KA + + A++ M GI PD A++ LCG
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393
Query: 173 ---------------------------DGKVDLAYELTVGAMKGKVEFGVLIYNALISGF 205
+G V A E+ K V +NALI G
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 206 CRTGRIRRAMAI---------------------KSF------------------MKWNGC 226
C++G ++ A + +SF G
Sbjct: 454 CKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGS 513
Query: 227 EPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYM 286
PD+V+YN ++N +C +D A KL+ ++ G+ PD +YN L+ GL + ++A+
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFK 573
Query: 287 FMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL 346
K + + Y +++ C+ + A+ L+ ++ LD T + + F
Sbjct: 574 LFYAKDDFR--HSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF- 630
Query: 347 REGSSAMAEKLLNQMRGMNLSPDRIL---YTTIIDCLCKSREIGTAYGVFLDMVEQGITP 403
+EG + E+ L ++ ++ D + YT + LC+S A VF + E+ I
Sbjct: 631 KEGET---ERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILV 687
Query: 404 DVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKL-------LIGGLVQE-KK 455
S LI+GLCK ++ A+ ++ + + FKL L+ L++ +K
Sbjct: 688 TPPSCVKLIHGLCKREQLDAAIEVF-------LYTLDNNFKLMPRVCNYLLSSLLESTEK 740
Query: 456 LELACRLWDQMMEKGFTLD 474
+E+ +L ++M G+ +D
Sbjct: 741 MEIVSQLTNRMERAGYNVD 759
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Query: 338 FTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMV 397
F ++I + + + L +++ +S D + +I K A F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 398 EQGITPDVISYNALINGLCKSSRVSE-AMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKL 456
E PDV +YN ++ + + A +Y EM P+ TF +L+ GL ++ +
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 457 ELACRLWDQMMEKGFTLDKTVSAALIEAIHLQDAAN 492
A +++D M +G + ++ LI + + +A+
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 215/428 (50%), Gaps = 15/428 (3%)
Query: 26 DQAVHVFDEMTQSN-CRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSR 84
++A+ +FDE ++ VF N + L + + D +M G +Y+
Sbjct: 426 EEALKLFDESFETGLANVFVC--NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 85 FISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKA 144
+ G C KN L I VF ++ KG +P+ TY+I+IDG + + A
Sbjct: 484 VMLGHCRQKNMDLARI-----------VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 145 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGK-VEFGVLIYNALIS 203
++ HM + I+ + ++ GLC G+ A EL ++ K + + YN++I
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 204 GFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEP 263
GF + G + A+A M NG P+++TY +++N C +D+A ++ EM++ G++
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 264 DVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLF 323
D+ +Y L+ G C + ++ A + +E + YN++I F G A L+
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 324 EGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKS 383
+ M + G+ D+ T+T LI L++G+ +A +L +M+ + L PD I+YT I++ L K
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 384 REIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 443
+ +F +M + +TP+V+ YNA+I G + + EA L++EM +G PD TF
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 444 KLLIGGLV 451
+L+ G V
Sbjct: 833 DILVSGQV 840
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 215/496 (43%), Gaps = 49/496 (9%)
Query: 26 DQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRF 85
D AV + ++M + + F NR + L++ + + Y +M +G
Sbjct: 180 DHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIG----------- 228
Query: 86 ISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAV 145
+ G + L + ALEV + + +G EPD + Y++ + CK + A
Sbjct: 229 VDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMAN 288
Query: 146 QAWEHMIENGI-KPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 204
M E + P + ++++ G +D A L + + V+ +LI+G
Sbjct: 289 SLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITG 348
Query: 205 FCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 264
C+ + A+ + M+ G P+ VT++ ++ ++ +++A + +ME G+ P
Sbjct: 349 HCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPS 408
Query: 265 VYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFE 324
V+ + +++G + ++A + E GL + NT++ CK G+T A +L
Sbjct: 409 VFHVHTIIQGWLKGQKHEEALKLFDESFET-GLANVFVCNTILSWLCKQGKTDEATELLS 467
Query: 325 GMRRRGIELDVV-----------------------------------TFTILIKAFLREG 349
M RGI +VV T++ILI R
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 350 SSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQG-ITPDVISY 408
A +++N M N+ + ++Y TII+ LCK + A + +M+E+ + +SY
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 409 NALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMME 468
N++I+G K + A+ YEEM G P+ +T+ L+ GL + +++ A + D+M
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 469 KGFTLDKTVSAALIEA 484
KG LD ALI+
Sbjct: 648 KGVKLDIPAYGALIDG 663
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 214/475 (45%), Gaps = 13/475 (2%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y + I VK G +D A+ + DEM + + I +++ + +M
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
G S T+S I KN M+K ALE + KM G P V +
Sbjct: 367 KEGPSPNSVTFSVLIEWF--RKN--------GEMEK-ALEFYKKMEVLGLTPSVFHVHTI 415
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
I G K ++ ++A++ ++ E G+ + C ++ LC GK D A EL +
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
V+ YN ++ G CR + A + S + G +P+ TY+ +++ A +
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVSYNTVIEAF 310
+V M S IE + Y ++ GLC Q KA + +E K L +SYN++I+ F
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDR 370
K G+ A +E M GI +V+T+T L+ + A ++ ++M+ + D
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEE 430
Y +ID CK + +A +F +++E+G+ P YN+LI+G + A+ LY++
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 431 MQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
M G D T+ LI GL+++ L LA L+ +M G D+ + ++ +
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 194/409 (47%), Gaps = 30/409 (7%)
Query: 16 ISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGF 75
+S L K G D+A + +M + YN + R DL + + + G
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 76 SLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIVIDGL 135
+TYS I G C ++ ++ ALEV + M S E + V Y +I+GL
Sbjct: 510 KPNNYTYSILIDG-C----------FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558
Query: 136 CKAKEFDKAVQAWEHMIENGIKPDNKACAA------LVVGLCGDGKVD---LAYELTVGA 186
CK + KA + +MIE + + C + ++ G +G++D AYE G
Sbjct: 559 CKVGQTSKARELLANMIE-----EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG- 612
Query: 187 MKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVML 246
+ V+ Y +L++G C+ R+ +A+ ++ MK G + D+ Y A+++ +C +
Sbjct: 613 --NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 247 DEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNT 305
+ A L E+ G+ P YN L+ G N + A + + KKM GLR D +Y T
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM-VAALDLYKKMLKDGLRCDLGTYTT 729
Query: 306 VIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMN 365
+I+ K G A +L+ M+ G+ D + +T+++ ++G K+ +M+ N
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 366 LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALING 414
++P+ ++Y +I + + A+ + +M+++GI PD +++ L++G
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 176/383 (45%), Gaps = 12/383 (3%)
Query: 109 ALEVFHKMVSKGREPDVVTY----TIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACA 164
A+++ ++M+ E DV+ + + L + +A + + M+ G+ DN
Sbjct: 182 AVDIVNQML----ELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQ 237
Query: 165 ALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWN 224
L+ + K A E+ A++ E L+Y+ + C+T + A ++ MK
Sbjct: 238 LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEK 297
Query: 225 G-CEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDK 283
C P TY +++ + +D+A +L EM S GI +V + L+ G C +N L
Sbjct: 298 KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357
Query: 284 AYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILI 342
A + + KME +G + V+++ +IE F K G+ +A + ++ M G+ V +I
Sbjct: 358 A-LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 343 KAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGIT 402
+ +L+ A KL ++ L+ + + TI+ LCK + A + M +GI
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 403 PDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRL 462
P+V+SYN ++ G C+ + A ++ + +G P+ T+ +LI G + + A +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 463 WDQMMEKGFTLDKTVSAALIEAI 485
+ M ++ V +I +
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGL 558
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 143/338 (42%), Gaps = 51/338 (15%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSN--CRVFSIDYNRFIGVLIRHSRFDLVQFYY 67
++Y+ I+ L K G +A + M + C V + YN I + D Y
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSIIDGFFKEGEMDSAVAAY 607
Query: 68 QQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVT 127
++M G S TY+ ++GLC KN + MD+ ALE+ +M +KG + D+
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLC--KN--------NRMDQ-ALEMRDEMKNKGVKLDIPA 656
Query: 128 YTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAM 187
Y +IDG CK + A + ++E G+ P
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQP-------------------------- 690
Query: 188 KGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLD 247
IYN+LISGF G + A+ + M +G DL TY +++ + L
Sbjct: 691 ---------IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 248 EAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV-SYNTV 306
A +L EM++ G+ PD Y ++ GL Q K + M ++M+ + V YN V
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV-VKMFEEMKKNNVTPNVLIYNAV 800
Query: 307 IEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKA 344
I + G A++L + M +GI D TF IL+
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 216 AIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGL 275
+ KSF G E + +N +LN Y + D A +V +M + P N+ L L
Sbjct: 153 SAKSF----GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 276 CNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELD 334
N L +A + +M A G+ D V+ ++ A + + A ++ RG E D
Sbjct: 209 VQRNSLTEAKE-LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPD 267
Query: 335 VVTFTILIKAFLREGSSAMAEKLLNQMRGMNLS-PDRILYTTIIDCLCKSREIGTAYGVF 393
+ +++ ++A + AMA LL +M+ L P + YT++I K + A +
Sbjct: 268 SLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLK 327
Query: 394 LDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQE 453
+M+ GI+ +V++ +LI G CK++ + A+ L+++M+ G P+ VTF +LI +
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKN 387
Query: 454 KKLELACRLWDQMMEKGFT 472
++E A + +M G T
Sbjct: 388 GEMEKALEFYKKMEVLGLT 406
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%)
Query: 321 KLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCL 380
KL + + G E++ F L+ A+ ++ + A ++NQM +++ P + L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 381 CKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDE 440
+ + A ++ MV G+ D ++ L+ + + +EA+ + RGA PD
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 441 VTFKLLIGGLVQEKKLELACRLWDQMMEK 469
+ + L + + L +A L +M EK
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEK 297
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 62/135 (45%)
Query: 350 SSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYN 409
+S + KL++ + + + +++ K R+ A + M+E + P N
Sbjct: 143 ASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVN 202
Query: 410 ALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEK 469
++ L + + ++EA LY M G D VT +LL+ ++E+K A + + +E+
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262
Query: 470 GFTLDKTVSAALIEA 484
G D + + ++A
Sbjct: 263 GAEPDSLLYSLAVQA 277
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 244/527 (46%), Gaps = 64/527 (12%)
Query: 20 VKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTP 79
VKA + + V M + R Y IG + D++ +QQM LG+ T
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 80 FTYSRFISG-------------LCEVK------NFTLINILLDNMDK-----LALEVFHK 115
++ I G L E+K + L N+ +D+ K +A + FH+
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 116 MVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGK 175
+ + G +PD VTYT +I LCKA D+AV+ +EH+ +N P A +++G GK
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 176 VDLAYE-LTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYN 234
D AY L KG + V+ YN +++ + G++ A+ + MK + P+L TYN
Sbjct: 324 FDEAYSLLERQRAKGSIP-SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYN 381
Query: 235 AILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEA 294
+++ C LD A +L M+ G+ P+V + N ++ LC S +LD+A M ++M+
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA-MFEEMDY 440
Query: 295 K-GLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAM 353
K D++++ ++I+ K G+ AYK++E M + + +T LIK F G
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 354 AEKLLNQMRGMNLSPDRILYTTIIDCLCKSRE---------------------------- 385
K+ M N SPD L T +DC+ K+ E
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 386 -------IGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHP 438
Y +F M EQG D +YN +I+G CK +V++A L EEM+ +G P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 439 DEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
VT+ +I GL + +L+ A L+++ K L+ + ++LI+
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/520 (24%), Positives = 234/520 (45%), Gaps = 57/520 (10%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQ 69
+ Y ++ L K G +D+A+ VF+EM + S YN I +L R + D
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST-YNILIDMLCRAGKLDTAFELRDS 402
Query: 70 MHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKL-----ALEVFHKMVSKGREPD 124
M G L P N +NI++D + K A +F +M K PD
Sbjct: 403 MQKAG--LFP--------------NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 125 VVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTV 184
+T+ +IDGL K D A + +E M+++ + ++ +L+ G+ + +++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 185 GAM-------------------------KGKVEFGVL----------IYNALISGFCRTG 209
+ KG+ F + Y+ LI G + G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 210 RIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYN 269
+ MK GC D YN +++ +C +++A +L+ EM++ G EP V +Y
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 270 QLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRR 329
++ GL ++LD+AYM + + + V Y+++I+ F K G+ AY + E + ++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 330 GIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTA 389
G+ ++ T+ L+ A ++ A M+ + +P+++ Y +I+ LCK R+ A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 390 YGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGG 449
+ + +M +QG+ P ISY +I+GL K+ ++EA L++ + G PD + +I G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 450 LVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQD 489
L + A L+++ +G + L++ +H D
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 214/481 (44%), Gaps = 12/481 (2%)
Query: 5 LGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQ 64
L A ++Y I + K G +D A F E+ + + + Y IGVL + +R D
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 65 FYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPD 124
++ + + Y+ I G F A + + +KG P
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF-----------DEAYSLLERQRAKGSIPS 342
Query: 125 VVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTV 184
V+ Y ++ L K + D+A++ +E M ++ P+ L+ LC GK+D A+EL
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 185 GAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEV 244
K + V N ++ C++ ++ A A+ M + C PD +T+ ++++
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 245 MLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYN 304
+D+A K+ +M + Y L+K N + + + + D N
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 305 TVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGM 364
T ++ K G+ + +FE ++ R D +++ILI ++ G + +L M+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 365 NLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEA 424
D Y +ID CK ++ AY + +M +G P V++Y ++I+GL K R+ EA
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 425 MHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
L+EE + + + V + LI G + +++ A + +++M+KG T + +L++A
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 485 I 485
+
Sbjct: 702 L 702
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 12/428 (2%)
Query: 47 YNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMD 106
YN + V+ R FD + +M GF + T + G + N L + D
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKA------NKLREGYD 154
Query: 107 KLALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAAL 166
V M P YT +I D + ++ M E G +P L
Sbjct: 155 -----VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTL 209
Query: 167 VVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGC 226
+ G +G+VD A L ++ +++YN I F + G++ A ++ NG
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 227 EPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYM 286
+PD VTY +++ C LDEA ++ +E P Y+YN ++ G ++ + D+AY
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 287 FMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL 346
+ ++ + ++YN ++ K G+ A K+FE M++ ++ T+ ILI
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLC 388
Query: 347 REGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVI 406
R G A +L + M+ L P+ ++D LCKS+++ A +F +M + TPD I
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 407 SYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQM 466
++ +LI+GL K RV +A +YE+M + + + LI + E +++ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 467 MEKGFTLD 474
+ + + D
Sbjct: 509 INQNCSPD 516
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 165/360 (45%), Gaps = 3/360 (0%)
Query: 127 TYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGA 186
+Y ++ + + + FD Q M G P C +V+G K+ Y++
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 187 MKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVML 246
K K Y LI F + + M+ G EP + + ++ + E +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 247 DEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNT 305
D A L+ EM+S ++ D+ YN + ++D A+ F ++EA GL+ D+V+Y +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF-HEIEANGLKPDEVTYTS 278
Query: 306 VIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMN 365
+I CK + A ++FE + + + +I + G A LL + R
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 366 LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAM 425
P I Y I+ CL K ++ A VF +M ++ P++ +YN LI+ LC++ ++ A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 426 HLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
L + MQ G P+ T +++ L + +KL+ AC ++++M K T D+ +LI+ +
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 234/481 (48%), Gaps = 19/481 (3%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
++ I ++ GL ++A+ V EM C S + L+R RFD V YQ M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTI 130
G L P + F+ C K L +KL +M S G +P+V YTI
Sbjct: 191 ISRG--LVPDVHIYFVLFQCCFKQG-----LYSKKEKL----LDEMTSLGIKPNVYIYTI 239
Query: 131 VIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGK 190
I LC+ + ++A + +E M ++G+ P+ +A++ G C G V AY L + +
Sbjct: 240 YILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE 299
Query: 191 VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAE 250
+ V+++ L+ GFC+ + A ++ M G +P+L YN +++ +C + EA
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 251 KLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAF 310
L+ EMES + PDV++Y L+ GLC +Q+ +A K + +YN++I +
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 311 CKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAF--LREGSSAMAEKLLNQMRGMNLSP 368
CK +A L M G+E +++TF+ LI + +R+ +AM L +M + P
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG--LYFEMTIKGIVP 477
Query: 369 DRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLY 428
D + YT +ID K + A ++ DM+E GI P+ ++ L++G K R+S A+ Y
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 429 EEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAIHLQ 488
+E + + + V F LI GL Q + A R + M G T D ++++ HLQ
Sbjct: 538 QENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG-HLQ 596
Query: 489 D 489
+
Sbjct: 597 E 597
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 191/460 (41%), Gaps = 59/460 (12%)
Query: 11 IYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQM 70
IY K GL + + DEMT + Y +I L R ++ + + ++ M
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 71 HPLGFSLTPFTYSRFISGLCE-------------------VKNFTLINILLDNMDK---- 107
G +TYS I G C+ + N + L+D K
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 108 -LALEVFHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAAL 166
A +F MV G +P++ Y +I G CK+ +AV M + PD L
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 167 VVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGC 226
+ GLC + +V A L ++ YN+LI G+C+ + +A+ + S M +G
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 227 EPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYM 286
EP+++T++ +++ YC+ + A L EM GI PDV
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV--------------------- 479
Query: 287 FMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFL 346
V+Y +I+A K + A +L+ M GI + TF L+ F
Sbjct: 480 --------------VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 347 REGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVI 406
+EG ++A + + + +T +I+ LC++ I A F DM GITPD+
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC 585
Query: 407 SYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLL 446
SY +++ G + R+++ M L +M G P+ + +LL
Sbjct: 586 SYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLL 625
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 86/233 (36%), Gaps = 56/233 (24%)
Query: 308 EAFCKGGQTRRAYKLFEGMRRRGIEL--DVVTFT----------------ILIKAFL--- 346
EA K A+KLFE R + D+ +F+ LIK+ +
Sbjct: 46 EAILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERL 105
Query: 347 --REGSSAMAEKLLNQM---------------------------------RGMNLSPDRI 371
S M+ +L N + R M SPD
Sbjct: 106 KRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSK 165
Query: 372 LYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEM 431
+I++ L + R + + + M+ +G+ PDV Y L K S+ L +EM
Sbjct: 166 ACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM 225
Query: 432 QIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
G P+ + + I L ++ K+E A ++++ M + G + +A+I+
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDG 278
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 236/482 (48%), Gaps = 25/482 (5%)
Query: 10 LIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLI---RHSRFDLVQFY 66
L++R + N G+ ++ + VFD M + SID I L+ + R DL
Sbjct: 159 LVFRVYVDN----GMFEEGLRVFDYMVKKG---LSIDERSCIVFLVAAKKRRRIDLCLEI 211
Query: 67 YQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVV 126
+++M G +T ++ + + GLC ++ KL E KG +P+
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGE-------VEKSKKLIKE----FSVKGIKPEAY 260
Query: 127 TYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLC-GDGKVDLAYELTVG 185
TY +I+ K ++F + M ++G+ NK L++ L +GK+ A +L
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVY-NKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 186 AMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVM 245
+ +E V +Y +LIS CR G ++RA + + G P TY A+++ C
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 246 LDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYN 304
+ AE L+ EM+S G+ +N L+ G C +D+A M + ME KG + D + N
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASM-IYDVMEQKGFQADVFTCN 438
Query: 305 TVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGM 364
T+ F + + A + M G++L V++T LI + +EG+ A++L +M
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 365 NLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEA 424
+ P+ I Y +I CK +I A + +M G+ PD +Y +LI+G C + V EA
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 425 MHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEA 484
M L+ EM ++G + VT+ ++I GL + K + A L+D+M KG+T+D V ALI +
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Query: 485 IH 486
+H
Sbjct: 619 MH 620
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 13/230 (5%)
Query: 9 RLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQ 68
++++ I + G++D+A ++D M Q + N R R+D + +
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 69 QMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTY 128
+M G L+ +Y+ I C+ N + A +F +M SKG +P+ +TY
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNV-----------EEAKRLFVEMSSKGVQPNAITY 507
Query: 129 TIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL-TVGAM 187
++I CK + +A + +M NG+ PD+ +L+ G C VD A L + +
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL 567
Query: 188 KGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAIL 237
KG ++ + Y +ISG + G+ A + MK G D Y A++
Sbjct: 568 KG-LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 188 bits (477), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 233/488 (47%), Gaps = 22/488 (4%)
Query: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Y I + K G ++ A +F+EM ++ YN I + R D ++++M
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDVVTYTIV 131
+ TY+ I+ C+ + LE + +M G +P+VV+Y+ +
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPI-----------GLEFYREMKGNGLKPNVVSYSTL 373
Query: 132 IDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKV 191
+D CK +A++ + M G+ P+ +L+ C G + A+ L ++ V
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 192 EFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEK 251
E+ V+ Y ALI G C R++ A + M G P+L +YNA+++ + +D A +
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 252 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 311
L+ E++ GI+PD+ Y + GLC+ +++ A + M + E + + Y T+++A+
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 312 KGGQTRRAYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRG-MNLSPDR 370
K G L + M+ IE+ VVTF +LI + + A N++ L +
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 371 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEE 430
++T +ID LCK ++ A +F MV++G+ PD +Y +L++G K V EA+ L ++
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 431 MQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALI-------- 482
M G D + + L+ GL +L+ A ++M+ +G D+ + +++
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733
Query: 483 --EAIHLQ 488
EA+ LQ
Sbjct: 734 IDEAVELQ 741
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 186/443 (41%), Gaps = 106/443 (23%)
Query: 113 FHKMVSKGREPDVVTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGLCG 172
F M+ G P V TY I+ID +CK + + A +E M G+ PD
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD------------- 296
Query: 173 DGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVT 232
+ YN++I GF + GR+ + MK CEPD++T
Sbjct: 297 ----------------------TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334
Query: 233 YNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 292
YNA++N +C L + EM+ G++P+V SY+ L+ C + +A F V
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 293 EAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFT------------- 339
+ ++ +Y ++I+A CK G A++L M + G+E +VVT+T
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 340 ----------------------ILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTII 377
LI F++ + A +LLN+++G + PD +LY T I
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 378 DCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAH 437
LC +I A V +M E GI + + Y L++ KS +E +HL +EM+
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 438 PDEVTFKLLIGGLVQEK------------------------------------KLELACR 461
VTF +LI GL + K ++E A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 462 LWDQMMEKGFTLDKTVSAALIEA 484
L++QM++KG D+T +L++
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDG 657
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 145/287 (50%)
Query: 199 NALISGFCRTGRIRRAMAIKSFMKWNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMES 258
N L+ F + G+ M G P + TYN +++ C E ++ A L EM+
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 259 CGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRR 318
G+ PD +YN ++ G +LD F + + D ++YN +I FCK G+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 319 AYKLFEGMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIID 378
+ + M+ G++ +VV+++ L+ AF +EG A K MR + L P+ YT++ID
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 379 CLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHP 438
CK + A+ + +M++ G+ +V++Y ALI+GLC + R+ EA L+ +M G P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 439 DEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 485
+ ++ LI G V+ K ++ A L +++ +G D + I +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 224 NGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDK 283
N C P ++A+ + D ML+EA + +M+ + P S N LL + D
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 245
Query: 284 AYMFMVKKMEAKGLRDKV-SYNTVIEAFCKGGQTRRAYKLFEGMRRRGIELDVVTFTILI 342
F K M G R V +YN +I+ CK G A LFE M+ RG+ D VT+ +I
Sbjct: 246 VKRFF-KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 343 KAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGIT 402
F + G +M+ M PD I Y +I+C CK ++ + +M G+
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 403 PDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRL 462
P+V+SY+ L++ CK + +A+ Y +M+ G P+E T+ LI + L A RL
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 463 WDQMMEKGFTLDKTVSAALIEAI 485
++M++ G + ALI+ +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGL 447
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 7 AQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFY 66
A LIY + K+G + +H+ DEM + + V + + I L ++ Y
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 67 YQQM-HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLALEVFHKMVSKGREPDV 125
+ ++ + G ++ I GLC+ DN + A +F +MV KG PD
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCK-----------DNQVEAATTLFEQMVQKGLVPDR 648
Query: 126 VTYTIVIDGLCKAKEFDKAVQAWEHMIENGIKPDNKACAALVVGL 170
YT ++DG K +A+ + M E G+K D A +LV GL
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,441,948
Number of Sequences: 539616
Number of extensions: 7169081
Number of successful extensions: 34665
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 22658
Number of HSP's gapped (non-prelim): 3277
length of query: 493
length of database: 191,569,459
effective HSP length: 122
effective length of query: 371
effective length of database: 125,736,307
effective search space: 46648169897
effective search space used: 46648169897
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)