Query 043484
Match_columns 246
No_of_seqs 216 out of 1963
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 09:08:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 3.8E-51 1.3E-55 374.6 13.0 229 11-246 3-318 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 4.2E-44 1.4E-48 323.5 11.9 166 67-246 64-263 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 9.9E-44 3.4E-48 320.0 10.5 174 67-246 66-281 (312)
4 3on7_A Oxidoreductase, iron/as 100.0 1.9E-41 6.7E-46 301.0 12.5 165 67-244 56-262 (280)
5 1dcs_A Deacetoxycephalosporin 100.0 1.8E-41 6.1E-46 305.3 9.5 161 67-243 63-274 (311)
6 1odm_A Isopenicillin N synthas 100.0 2.9E-40 1E-44 299.6 14.3 148 91-246 96-298 (331)
7 3dkq_A PKHD-type hydroxylase S 58.3 12 0.00043 31.5 4.9 21 215-236 174-194 (243)
8 2rg4_A Uncharacterized protein 52.3 8.2 0.00028 31.8 2.7 25 215-239 185-209 (216)
9 2jig_A Prolyl-4 hydroxylase; h 46.2 35 0.0012 27.7 5.7 23 213-236 194-216 (224)
10 2x4k_A 4-oxalocrotonate tautom 43.9 20 0.00068 22.4 3.1 27 131-157 16-42 (63)
11 3abf_A 4-oxalocrotonate tautom 43.0 23 0.00079 22.4 3.3 27 131-157 14-40 (64)
12 1otf_A 4-oxalocrotonate tautom 39.7 25 0.00085 22.0 3.1 26 131-156 13-38 (62)
13 2opa_A Probable tautomerase YW 39.6 26 0.00087 21.9 3.1 26 131-156 13-38 (61)
14 3itq_A Prolyl 4-hydroxylase, a 34.0 70 0.0024 26.2 5.7 22 214-236 190-211 (216)
15 2vf9_A Coat protein; virion, R 32.7 12 0.00042 27.1 0.7 13 208-220 53-65 (131)
16 2da7_A Zinc finger homeobox pr 32.5 11 0.00036 25.9 0.3 41 116-161 14-54 (71)
17 3ry0_A Putative tautomerase; o 31.8 40 0.0014 21.6 3.1 26 131-156 13-38 (65)
18 3m21_A Probable tautomerase HP 30.7 42 0.0014 21.6 3.1 26 131-156 16-41 (67)
19 2p17_A Pirin-like protein; GK1 29.7 47 0.0016 28.4 4.0 67 166-238 39-120 (277)
20 1gyx_A YDCE, B1461, hypothetic 29.0 45 0.0015 22.2 3.1 27 131-157 14-40 (76)
21 3m20_A 4-oxalocrotonate tautom 29.0 36 0.0012 21.7 2.5 26 131-156 12-37 (62)
22 3mb2_A 4-oxalocrotonate tautom 28.0 47 0.0016 21.8 3.0 26 131-156 14-39 (72)
23 3ej9_A Alpha-subunit of trans- 21.9 74 0.0025 21.2 3.1 26 131-156 14-39 (76)
24 3djh_A Macrophage migration in 20.5 74 0.0025 22.9 3.0 25 132-156 70-94 (114)
25 1y66_A Engrailed homeodomain; 20.2 73 0.0025 19.5 2.4 42 113-159 3-44 (52)
26 2qt7_A Receptor-type tyrosine- 20.0 53 0.0018 23.5 2.0 33 137-169 18-51 (91)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=3.8e-51 Score=374.57 Aligned_cols=229 Identities=30% Similarity=0.441 Sum_probs=189.5
Q ss_pred CCcchHHHHHCCCCCCCCcccCCCcchhhhhhc--cc---CCccceeEecCCCCc---H---H-----------------
Q 043484 11 TKVGVKGLVDAGVVNIPRIFIQPSEELAQELIT--HW---SNLQVLVVDLGGIRH---N---K----------------- 62 (246)
Q Consensus 11 ~~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~--~~---~~~~IPVIDLs~l~~---~---e----------------- 62 (246)
.+++||+|+++|+++||++||+|+++++..... .. ...+||||||+.+.. + +
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v 82 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL 82 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence 457899999999999999999998887652210 00 123699999998742 1 0
Q ss_pred ---------HHHH--------------HHHHhhcCC-CCccccccCCCcccccCCchhhhccccccCCCC-CCCCCCc--
Q 043484 63 ---------LEDI--------------VDQFYTRYP-TRSIKFNCNFDLYFSRIASWRDMLGIYNFDINS-LDPNQLP-- 115 (246)
Q Consensus 63 ---------~~~~--------------K~k~~~~~~-~~~~GY~~~~~~~~~~~~dw~e~~~~~~~~p~~-~~~~~~P-- 115 (246)
+++| |++|..... ....||+........+..||+|+|.+ ...|.. ..++.||
T Consensus 83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~-~~~p~~~~~~~~wP~~ 161 (356)
T 1gp6_A 83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFH-LAYPEEKRDLSIWPKT 161 (356)
T ss_dssp ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEE-EEESGGGCCGGGSCCS
T ss_pred eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeee-ecCCccccccccCCCc
Confidence 3333 777554333 35689987766566778999999999 555532 2344565
Q ss_pred -hhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHhcCCChHHHhhccC---CCccccEEeecCCCCCCccCCcccCCcCCC
Q 043484 116 -EVCRYKLYPYTTMAHMKEVRKLGETLFGILSVALGLEPEYLKGMGC---SNGYDFVYNYYPHCPQPKLTLGAQGNSDPS 191 (246)
Q Consensus 116 -~~fr~~~~~y~~~~~~~~~~~l~~~ll~~la~~Lgl~~~~l~~~~~---~~~~~~r~~~YPp~p~p~~~~G~~~HtD~~ 191 (246)
+.||+++++| +++|.+|+.+|+++||++|||++++|.+.+. ...+.+|+||||||++|+.++|+++|||+|
T Consensus 162 ~~~fr~~~~~y-----~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g 236 (356)
T 1gp6_A 162 PSDYIEATSEY-----AKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVS 236 (356)
T ss_dssp STTHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCS
T ss_pred chhhhHHHHHH-----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCC
Confidence 6899999999 9999999999999999999999999999886 466789999999999999999999999999
Q ss_pred CCceeeeCCCCceEEe--------------------------eCCeeecccceeeccCCCCCeeEEEEeecCCCCC--Cc
Q 043484 192 FLTILLQDQIRGLQVL--------------------------SNDKLKSVDHRVVANKHASPRVSVACFFAGHATT--VS 243 (246)
Q Consensus 192 ~lTlL~qd~v~GLQV~--------------------------sng~~kS~~HRVv~~~~~~~R~Sia~F~~P~~d~--i~ 243 (246)
+||||+||+++||||+ |||+|||+.|||++| .+++|+|+|||++|+.|+ |.
T Consensus 237 ~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~~R~Sia~F~~P~~d~~~i~ 315 (356)
T 1gp6_A 237 ALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVN-KEKVRISWAVFCEPPKDKIVLK 315 (356)
T ss_dssp SEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCC-SSCCEEEEEEEEECCTTTCEEC
T ss_pred eEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCC-CCCCEEEEEEeecCCCCCcEEe
Confidence 9999999999999998 999999999999999 889999999999999997 88
Q ss_pred cCC
Q 043484 244 PLP 246 (246)
Q Consensus 244 Plp 246 (246)
|+|
T Consensus 316 pl~ 318 (356)
T 1gp6_A 316 PLP 318 (356)
T ss_dssp CCG
T ss_pred CCh
Confidence 875
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.2e-44 Score=323.53 Aligned_cols=166 Identities=30% Similarity=0.448 Sum_probs=142.7
Q ss_pred HHHHhhcCCCCccccccCCCcccccCCchhhhccccccCCCCCCCCCCc---hhhhhhhhhhhchHHHHHHHHHHHHHHH
Q 043484 67 VDQFYTRYPTRSIKFNCNFDLYFSRIASWRDMLGIYNFDINSLDPNQLP---EVCRYKLYPYTTMAHMKEVRKLGETLFG 143 (246)
Q Consensus 67 K~k~~~~~~~~~~GY~~~~~~~~~~~~dw~e~~~~~~~~p~~~~~~~~P---~~fr~~~~~y~~~~~~~~~~~l~~~ll~ 143 (246)
|+++.. . ..||+... .+.+..||+|+|.+ ...|.. .++.|| +.||+++++| +++|.+|+.+|++
T Consensus 64 K~~~~~-~---~~Gy~~~~--~e~~~~d~ke~~~~-~~~p~~-~~~~wP~~~~~fr~~~~~y-----~~~~~~l~~~ll~ 130 (319)
T 1w9y_A 64 RFKELV-A---SKALEGVQ--AEVTDMDWESTFFL-KHLPIS-NISEVPDLDEEYREVMRDF-----AKRLEKLAEELLD 130 (319)
T ss_dssp HHHHHH-H---HHHHTTCC--CCGGGCCCCEEEEE-EEESCC-GGGGCTTCCHHHHHHHHHH-----HHHHHHHHHHHHH
T ss_pred Hhhhcc-C---CCCCCccc--ccCCCCChhhheee-ecCCcc-cccccccchhHHHHHHHHH-----HHHHHHHHHHHHH
Confidence 767532 2 24786432 23578899999999 655532 234565 7899999999 9999999999999
Q ss_pred HHHHhcCCChHHHhhccCC---CccccEEeecCCCCCCccCCcccCCcCCCCCceeeeC-CCCceEEe------------
Q 043484 144 ILSVALGLEPEYLKGMGCS---NGYDFVYNYYPHCPQPKLTLGAQGNSDPSFLTILLQD-QIRGLQVL------------ 207 (246)
Q Consensus 144 ~la~~Lgl~~~~l~~~~~~---~~~~~r~~~YPp~p~p~~~~G~~~HtD~~~lTlL~qd-~v~GLQV~------------ 207 (246)
+||++|||++++|.+.+.. ..+.+|+||||||++|+.++|+++|||+|+||||+|| +++||||+
T Consensus 131 ~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~p 210 (319)
T 1w9y_A 131 LLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR 210 (319)
T ss_dssp HHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCT
T ss_pred HHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCC
Confidence 9999999999999987653 4568999999999999999999999999999999996 79999997
Q ss_pred --------------eCCeeecccceeeccCCCCCeeEEEEeecCCCCC-CccCC
Q 043484 208 --------------SNDKLKSVDHRVVANKHASPRVSVACFFAGHATT-VSPLP 246 (246)
Q Consensus 208 --------------sng~~kS~~HRVv~~~~~~~R~Sia~F~~P~~d~-i~Plp 246 (246)
|||+|||+.|||++| ++++|+|+|||++|+.|+ |.|+|
T Consensus 211 galvVNiGD~l~~~SnG~~kS~~HRVv~~-~~~~R~Sia~F~~p~~d~~i~pl~ 263 (319)
T 1w9y_A 211 HSIVVNLGDQLEVITNGKYKSVMHRVIAQ-KDGARMSLASFYNPGSDAVIYPAP 263 (319)
T ss_dssp TCEEEEECHHHHHHTTTSSCCCCEEECCC-SSSCCEEEEEEEECCTTCEECCCG
T ss_pred CcEEEEhHHHHHHHhCCeeecccceecCC-CCCCceEEEEEecCCCCCeEeCch
Confidence 999999999999999 889999999999999999 99985
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=9.9e-44 Score=320.01 Aligned_cols=174 Identities=18% Similarity=0.176 Sum_probs=141.5
Q ss_pred HHHHhhcCCCCccccccCCC--cccccCCchhhhccccccCCC-C-----CCCCCCc---hhhhhhhhhhhchHHHHHHH
Q 043484 67 VDQFYTRYPTRSIKFNCNFD--LYFSRIASWRDMLGIYNFDIN-S-----LDPNQLP---EVCRYKLYPYTTMAHMKEVR 135 (246)
Q Consensus 67 K~k~~~~~~~~~~GY~~~~~--~~~~~~~dw~e~~~~~~~~p~-~-----~~~~~~P---~~fr~~~~~y~~~~~~~~~~ 135 (246)
|++|... .....||..... ....+..||+|+|.++...+. + ..+|.|| +.||+++++| +++|.
T Consensus 66 K~~~~~~-~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y-----~~~~~ 139 (312)
T 3oox_A 66 KKQYAGV-KGGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWL-----YNSLD 139 (312)
T ss_dssp HGGGBSS-GGGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHH-----HHHHH
T ss_pred HhhhccC-CCCccccccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHH-----HHHHH
Confidence 6675433 444678853322 122457899999988322221 1 1246776 6899999999 99999
Q ss_pred HHHHHHHHHHHHhcCCChHHHhhccCCCccccEEeecCCCCCCccCCcccCCcCCCCCceeeeCCCCceEEe--------
Q 043484 136 KLGETLFGILSVALGLEPEYLKGMGCSNGYDFVYNYYPHCPQPKLTLGAQGNSDPSFLTILLQDQIRGLQVL-------- 207 (246)
Q Consensus 136 ~l~~~ll~~la~~Lgl~~~~l~~~~~~~~~~~r~~~YPp~p~p~~~~G~~~HtD~~~lTlL~qd~v~GLQV~-------- 207 (246)
+|+.+|+++||++|||++++|.+.+..+.+.+|+||||||++++..+|+++|||+|+||||+||+++||||+
T Consensus 140 ~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~ 219 (312)
T 3oox_A 140 GMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLP 219 (312)
T ss_dssp HHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEE
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEE
Confidence 999999999999999999999998877778899999999998766699999999999999999999999996
Q ss_pred -------------------eCCeeecccceeeccC---CCCCeeEEEEeecCCCCC-CccCC
Q 043484 208 -------------------SNDKLKSVDHRVVANK---HASPRVSVACFFAGHATT-VSPLP 246 (246)
Q Consensus 208 -------------------sng~~kS~~HRVv~~~---~~~~R~Sia~F~~P~~d~-i~Plp 246 (246)
|||+|||+.|||+.++ ..++|+|+|||++|+.|+ |.|||
T Consensus 220 V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~ 281 (312)
T 3oox_A 220 INPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQ 281 (312)
T ss_dssp CCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCG
T ss_pred CCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCc
Confidence 9999999999997652 156799999999999999 99986
No 4
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.9e-41 Score=300.96 Aligned_cols=165 Identities=18% Similarity=0.225 Sum_probs=133.1
Q ss_pred HHHHhhcCCCCccccccCC---CcccccCCchhhhccccccCCCCCCCCCCchhhhhhhhhhhchHHHHHHHHHHHHHHH
Q 043484 67 VDQFYTRYPTRSIKFNCNF---DLYFSRIASWRDMLGIYNFDINSLDPNQLPEVCRYKLYPYTTMAHMKEVRKLGETLFG 143 (246)
Q Consensus 67 K~k~~~~~~~~~~GY~~~~---~~~~~~~~dw~e~~~~~~~~p~~~~~~~~P~~fr~~~~~y~~~~~~~~~~~l~~~ll~ 143 (246)
|++| ...+....||+... ........||+|+|.+ . | + +.+|+.||+++++| +++|.+|+.+|++
T Consensus 56 K~k~-~~~~~~~~GY~~~~~~e~~~~~~~~D~kE~~~~-~--p---~-~~~p~~fr~~~~~y-----~~~~~~l~~~ll~ 122 (280)
T 3on7_A 56 KNEF-MFNRETHDGFFPASISETAKGHTVKDIKEYYHV-Y--P---W-GRIPDSLRANILAY-----YEKANTLASELLE 122 (280)
T ss_dssp GGGG-BCCTTTCCEEECCC--------CCCCSCEEEEE-C--T---T-SCCCGGGHHHHHHH-----HHHHHHHHHHHHH
T ss_pred HHHh-ccCCCCCCccccCccccccCCCCcccHHHHHhc-C--C---C-CCCCHHHHHHHHHH-----HHHHHHHHHHHHH
Confidence 6664 34445578997543 1222357899999988 3 3 1 24789999999999 9999999999999
Q ss_pred HHHHhcCCCh--HH---HhhccCCCc-cccEEeecCCCCCCc--cCCcccCCcCCCCCceeeeCCCCceEEe--------
Q 043484 144 ILSVALGLEP--EY---LKGMGCSNG-YDFVYNYYPHCPQPK--LTLGAQGNSDPSFLTILLQDQIRGLQVL-------- 207 (246)
Q Consensus 144 ~la~~Lgl~~--~~---l~~~~~~~~-~~~r~~~YPp~p~p~--~~~G~~~HtD~~~lTlL~qd~v~GLQV~-------- 207 (246)
+||++||++. ++ |.+.+..+. +.+|+||||||+.++ .++|+++|||+|+||||+||+++||||+
T Consensus 123 ~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~ 202 (280)
T 3on7_A 123 WIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLD 202 (280)
T ss_dssp HHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEE
T ss_pred HHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEE
Confidence 9999999863 22 455555444 789999999999875 4799999999999999999999999997
Q ss_pred -------------------eCCeeecccceeeccC---CCCCeeEEEEeecCCCCC-Ccc
Q 043484 208 -------------------SNDKLKSVDHRVVANK---HASPRVSVACFFAGHATT-VSP 244 (246)
Q Consensus 208 -------------------sng~~kS~~HRVv~~~---~~~~R~Sia~F~~P~~d~-i~P 244 (246)
|||+|||+.|||+.++ ..++|||+|||++|+.|+ |.|
T Consensus 203 V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p 262 (280)
T 3on7_A 203 VPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE 262 (280)
T ss_dssp CCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS
T ss_pred CcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC
Confidence 9999999999988762 156899999999999999 876
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.8e-41 Score=305.26 Aligned_cols=161 Identities=18% Similarity=0.169 Sum_probs=124.6
Q ss_pred HHHHhhcCCCCccccccCCCc------ccccCCchhhhccccccCCCCCCCCCC-chhhhhhhhhhhchHHHHHHHHHHH
Q 043484 67 VDQFYTRYPTRSIKFNCNFDL------YFSRIASWRDMLGIYNFDINSLDPNQL-PEVCRYKLYPYTTMAHMKEVRKLGE 139 (246)
Q Consensus 67 K~k~~~~~~~~~~GY~~~~~~------~~~~~~dw~e~~~~~~~~p~~~~~~~~-P~~fr~~~~~y~~~~~~~~~~~l~~ 139 (246)
|+++.........||+..... ...+..||+|+|.+ ...| +.| |+.||+++++| +++|.+|+.
T Consensus 63 K~~~~~~~~~~~~Gy~~~~~e~~~~~~~~~~~~d~~E~~~~-~~~~-----n~wP~~~fr~~~~~y-----~~~~~~l~~ 131 (311)
T 1dcs_A 63 KRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSMCYSM-GTAD-----NLFPSGDFERIWTQY-----FDRQYTASR 131 (311)
T ss_dssp HHHTBCSSCCSSSEEEEC-----------------CEEEEE-CSSS-----CCCSCHHHHHHHHHH-----HHHHHHHHH
T ss_pred hHHhhccCCCCCCceeeccccccccccCCCCCCCcceeeec-cCCC-----CCCCChHHHHHHHHH-----HHHHHHHHH
Confidence 555443333456799765432 23568899999999 5443 345 48999999999 999999999
Q ss_pred HHHHHHHHhcCC----ChHHHhhccCCCccccEEeecCCCCCCc--c--CCcccCCcCCCCCceeeeC-CCCc---eEEe
Q 043484 140 TLFGILSVALGL----EPEYLKGMGCSNGYDFVYNYYPHCPQPK--L--TLGAQGNSDPSFLTILLQD-QIRG---LQVL 207 (246)
Q Consensus 140 ~ll~~la~~Lgl----~~~~l~~~~~~~~~~~r~~~YPp~p~p~--~--~~G~~~HtD~~~lTlL~qd-~v~G---LQV~ 207 (246)
+|+++||++||| ++++|.+. .+.+|+||||||++++ . .+|+++|||+|+||||+|| +++| |||+
T Consensus 132 ~ll~~la~~Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~ 207 (311)
T 1dcs_A 132 AVAREVLRATGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAE 207 (311)
T ss_dssp HHHHHHHHHTTCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEE
T ss_pred HHHHHHHHHcCCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEE
Confidence 999999999999 88998876 5679999999999874 3 6789999999999999999 8999 9997
Q ss_pred --------------------------eCCeeecccceeeccCC-----CCCeeEEEEeecCCCCC-Cc
Q 043484 208 --------------------------SNDKLKSVDHRVVANKH-----ASPRVSVACFFAGHATT-VS 243 (246)
Q Consensus 208 --------------------------sng~~kS~~HRVv~~~~-----~~~R~Sia~F~~P~~d~-i~ 243 (246)
|||+|||+.|||+++ . .++|+|+|||++|+.|+ |.
T Consensus 208 ~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~~~~~~~R~Si~~F~~p~~d~~i~ 274 (311)
T 1dcs_A 208 VGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAP-RRDQIAGSSRTSSVFFLRPNADFTFS 274 (311)
T ss_dssp ETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC-----CTTCCEEEEEEEECCCTTCEEE
T ss_pred eCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCC-CcccCCCCCeEEEEEEEcCCCCcEEe
Confidence 999999999999998 6 78999999999999998 76
No 6
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2.9e-40 Score=299.63 Aligned_cols=148 Identities=21% Similarity=0.197 Sum_probs=132.2
Q ss_pred cCCchhhhccccccCC--CC---------CCCCCCc-----hhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHhcCCChH
Q 043484 91 RIASWRDMLGIYNFDI--NS---------LDPNQLP-----EVCRYKLYPYTTMAHMKEVRKLGETLFGILSVALGLEPE 154 (246)
Q Consensus 91 ~~~dw~e~~~~~~~~p--~~---------~~~~~~P-----~~fr~~~~~y~~~~~~~~~~~l~~~ll~~la~~Lgl~~~ 154 (246)
++.||+|+|.+ ...+ ++ ..++.|| ++||+++++| +++|.+|+.+|+++||++|||+++
T Consensus 96 ~~~d~kE~~~~-~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y-----~~~~~~l~~~ll~~la~~Lgl~~~ 169 (331)
T 1odm_A 96 GKKAVESFCYL-NPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQY-----YWDVFGLSSALLKGYALALGKEEN 169 (331)
T ss_dssp TTBCCEEEEEC-CTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred CCCChhheEec-ccCCccccccccccccccCCCCCCCCCCChHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhCCCHH
Confidence 57899999999 4321 11 1245665 5799999999 999999999999999999999999
Q ss_pred HHhhccCCCccccE--EeecC------C---CCCCcc-CCcccCCcCCCCCceeeeCCCCceEEe---------------
Q 043484 155 YLKGMGCSNGYDFV--YNYYP------H---CPQPKL-TLGAQGNSDPSFLTILLQDQIRGLQVL--------------- 207 (246)
Q Consensus 155 ~l~~~~~~~~~~~r--~~~YP------p---~p~p~~-~~G~~~HtD~~~lTlL~qd~v~GLQV~--------------- 207 (246)
+|.+.+....+.+| +|||| | |++|+. ++|+++|||+|+||||+||+++||||+
T Consensus 170 ~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~gWi~V~p~pgal 249 (331)
T 1odm_A 170 FFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAGYQDIEADDTGY 249 (331)
T ss_dssp TTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETTEEEECCCCTTSE
T ss_pred HHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcCCCeEECCCCCCeE
Confidence 99998887778999 99999 8 999887 899999999999999999999999997
Q ss_pred -----------eCCeeecccceeeccCCCCCeeEEEEeecCCCCC-CccCC
Q 043484 208 -----------SNDKLKSVDHRVVANKHASPRVSVACFFAGHATT-VSPLP 246 (246)
Q Consensus 208 -----------sng~~kS~~HRVv~~~~~~~R~Sia~F~~P~~d~-i~Plp 246 (246)
|||+|||+.|||+ + ..++|+|+|||++|+.|+ |.|+|
T Consensus 250 vVNiGD~l~~~TnG~~kS~~HRVv-~-~~~~R~Sia~F~~P~~d~~i~pl~ 298 (331)
T 1odm_A 250 LINCGSYMAHLTNNYYKAPIHRVK-W-VNAERQSLPFFVNLGYDSVIDPFD 298 (331)
T ss_dssp EEEECHHHHHHTTTSSCCCCEEEE-C-CCSCEEEEEEEECCCTTCBCCCCC
T ss_pred EEEccHHHHHHhCCEeeCCCceeC-C-CCCCEEEEEEEEcCCCCCEEeCCC
Confidence 9999999999998 4 478999999999999999 99986
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=58.27 E-value=12 Score=31.50 Aligned_cols=21 Identities=14% Similarity=0.180 Sum_probs=15.1
Q ss_pred ccceeeccCCCCCeeEEEEeec
Q 043484 215 VDHRVVANKHASPRVSVACFFA 236 (246)
Q Consensus 215 ~~HRVv~~~~~~~R~Sia~F~~ 236 (246)
.+|+|..- ....|++++.++.
T Consensus 174 ~lH~v~pV-~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 174 SLHQVTPV-LSGERTAAFMWLQ 194 (243)
T ss_dssp SEEEECCE-EEECEEEEEEEEE
T ss_pred CeEcCccc-cccCEEEEEEehh
Confidence 57887654 4568999888765
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=52.32 E-value=8.2 Score=31.82 Aligned_cols=25 Identities=28% Similarity=0.303 Sum_probs=19.1
Q ss_pred ccceeeccCCCCCeeEEEEeecCCC
Q 043484 215 VDHRVVANKHASPRVSVACFFAGHA 239 (246)
Q Consensus 215 ~~HRVv~~~~~~~R~Sia~F~~P~~ 239 (246)
..|.|..+.++.+|+||+|.+.+..
T Consensus 185 l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 185 LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CEEeccCCCCCCCEEEEEEEeecCC
Confidence 5699998734579999999998865
No 9
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=46.25 E-value=35 Score=27.75 Aligned_cols=23 Identities=9% Similarity=0.027 Sum_probs=13.7
Q ss_pred ecccceeeccCCCCCeeEEEEeec
Q 043484 213 KSVDHRVVANKHASPRVSVACFFA 236 (246)
Q Consensus 213 kS~~HRVv~~~~~~~R~Sia~F~~ 236 (246)
..++|+|..- ....|+++..+++
T Consensus 194 ~~~lH~~~PV-~~G~K~~~~~Wi~ 216 (224)
T 2jig_A 194 PASLHGSCPT-LKGDKWSATKWIH 216 (224)
T ss_dssp GGGCEEECCE-EESEEEEEEEEEE
T ss_pred CCCcccCCcc-ccceEEEEEEeEE
Confidence 3566776543 3456777766654
No 10
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=43.86 E-value=20 Score=22.36 Aligned_cols=27 Identities=7% Similarity=0.160 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHh
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYLK 157 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l~ 157 (246)
.++-++|+..|.+++++.||.+++++.
T Consensus 16 ~e~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 16 DEQLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcccEE
Confidence 445678999999999999999986543
No 11
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=42.96 E-value=23 Score=22.37 Aligned_cols=27 Identities=26% Similarity=0.199 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHh
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYLK 157 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l~ 157 (246)
.++-++|+..|.+++++.||.+++++.
T Consensus 14 ~eqk~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 14 PEKKRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 344577999999999999999987643
No 12
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=39.70 E-value=25 Score=21.99 Aligned_cols=26 Identities=12% Similarity=0.034 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYL 156 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l 156 (246)
.++-++|+..|.+++++.||++++.+
T Consensus 13 ~e~k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 13 DEQKETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcccE
Confidence 45567899999999999999998643
No 13
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=39.60 E-value=26 Score=21.91 Aligned_cols=26 Identities=19% Similarity=0.192 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYL 156 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l 156 (246)
.++-++|+..|.+++++.||++++.+
T Consensus 13 ~eqk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 13 DEQKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcCeE
Confidence 45567899999999999999988643
No 14
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=33.97 E-value=70 Score=26.20 Aligned_cols=22 Identities=5% Similarity=-0.108 Sum_probs=14.9
Q ss_pred cccceeeccCCCCCeeEEEEeec
Q 043484 214 SVDHRVVANKHASPRVSVACFFA 236 (246)
Q Consensus 214 S~~HRVv~~~~~~~R~Sia~F~~ 236 (246)
.++|++..- ....|+++..+++
T Consensus 190 ~~lH~~~PV-~~G~K~v~~~W~~ 211 (216)
T 3itq_A 190 LTLHGGAPV-TKGEKWIATQWVR 211 (216)
T ss_dssp TTCEEECCE-EESCEEEEEEEEE
T ss_pred cccccccee-ccccEEEEEeeEe
Confidence 467887654 4467888777654
No 15
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=32.74 E-value=12 Score=27.06 Aligned_cols=13 Identities=46% Similarity=0.396 Sum_probs=11.7
Q ss_pred eCCeeecccceee
Q 043484 208 SNDKLKSVDHRVV 220 (246)
Q Consensus 208 sng~~kS~~HRVv 220 (246)
|||+|||++.-|+
T Consensus 53 sngrykstlklvv 65 (131)
T 2vf9_A 53 SNGRYKSTLKLVV 65 (131)
T ss_dssp TTSEEEEEEEEEE
T ss_pred CCCceeeeEEEEE
Confidence 9999999998765
No 16
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.49 E-value=11 Score=25.93 Aligned_cols=41 Identities=20% Similarity=0.110 Sum_probs=31.5
Q ss_pred hhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHhcCCChHHHhhccC
Q 043484 116 EVCRYKLYPYTTMAHMKEVRKLGETLFGILSVALGLEPEYLKGMGC 161 (246)
Q Consensus 116 ~~fr~~~~~y~~~~~~~~~~~l~~~ll~~la~~Lgl~~~~l~~~~~ 161 (246)
..-+.+++.| +..-.+-..+-+..||+.+||+.+.+..+|+
T Consensus 14 k~ql~~Lk~y-----F~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAY-----YAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHH-----HHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHH-----HHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 3457788898 5555555666677899999999999888775
No 17
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=31.82 E-value=40 Score=21.58 Aligned_cols=26 Identities=35% Similarity=0.372 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYL 156 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l 156 (246)
.++-++|+..|.+++.+.||++++..
T Consensus 13 ~eqk~~L~~~it~~~~~~lg~p~~~v 38 (65)
T 3ry0_A 13 PQEVAALGEALTAAAHETLGTPVEAV 38 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcccE
Confidence 45667899999999999999987653
No 18
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=30.69 E-value=42 Score=21.63 Aligned_cols=26 Identities=12% Similarity=0.125 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYL 156 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l 156 (246)
.++-++|+..|.+++++.||++++.+
T Consensus 16 ~eqK~~l~~~lt~~l~~~lg~p~~~v 41 (67)
T 3m21_A 16 NEQKQQLIEGVSDLMVKVLNKNKASI 41 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHCcCcccE
Confidence 45667899999999999999987653
No 19
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=29.74 E-value=47 Score=28.37 Aligned_cols=67 Identities=10% Similarity=0.053 Sum_probs=40.4
Q ss_pred ccEEeecCCCCCCccCCcccCCcCCCCCceeeeCC--------------CCceEEeeCCeeecccceeeccCCCCCeeEE
Q 043484 166 DFVYNYYPHCPQPKLTLGAQGNSDPSFLTILLQDQ--------------IRGLQVLSNDKLKSVDHRVVANKHASPRVSV 231 (246)
Q Consensus 166 ~~r~~~YPp~p~p~~~~G~~~HtD~~~lTlL~qd~--------------v~GLQV~sng~~kS~~HRVv~~~~~~~R~Si 231 (246)
++.+|+ -+ .+...++..||.++-++|++++.. -+++|..|-| +.+.|--... .+..-.-+
T Consensus 39 f~~ld~-~~--~~~~gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn~~~i~~GdvQwMtAG--~GI~HsE~~~-~~~~~~~l 112 (277)
T 2p17_A 39 FLLLME-DI--FERGTFDVHPHRGIETVTYVISGELEHFDSKAGHSTLGPGDVQWMTAG--RGVVHKEDPA-SGSTVHSL 112 (277)
T ss_dssp EEEEEE-EE--ECTTCCCCEEECSEEEEEEEEESCEEEEETTTEEEEECTTCEEEEECT--TCEEEEEEEC-TTCCEEEE
T ss_pred EEEEec-CC--CCCCCCCCCCCCCcEEEEEEEEeEEEEeeCCCCceEECCCeEEEEeCC--CCEEEEeecC-CCCCEEEE
Confidence 445666 32 344468889999999999998732 2456777665 4555654443 33333345
Q ss_pred EEeec-CC
Q 043484 232 ACFFA-GH 238 (246)
Q Consensus 232 a~F~~-P~ 238 (246)
-++.+ |.
T Consensus 113 QlWvnLP~ 120 (277)
T 2p17_A 113 QLWVNLPS 120 (277)
T ss_dssp EEEEECCG
T ss_pred EEEeeCCh
Confidence 55554 43
No 20
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=29.00 E-value=45 Score=22.18 Aligned_cols=27 Identities=7% Similarity=0.113 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHh
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYLK 157 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l~ 157 (246)
.++-++|+..|.+++++.||++++.+.
T Consensus 14 ~eqk~~L~~~l~~~l~~~lgip~~~v~ 40 (76)
T 1gyx_A 14 EQQKAALAADITDVIIRHLNSKDSSIS 40 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCceEE
Confidence 456678999999999999999987543
No 21
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=28.95 E-value=36 Score=21.65 Aligned_cols=26 Identities=15% Similarity=0.290 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYL 156 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l 156 (246)
.++-++|+..|.+++++.||++++.+
T Consensus 12 ~eqK~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 12 VGKKREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcceE
Confidence 34557899999999999999987543
No 22
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=28.05 E-value=47 Score=21.76 Aligned_cols=26 Identities=12% Similarity=0.133 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYL 156 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l 156 (246)
.++-++|+..|.+++++.||++++.+
T Consensus 14 ~eqK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 14 TEQKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccE
Confidence 45667899999999999999998654
No 23
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=21.88 E-value=74 Score=21.18 Aligned_cols=26 Identities=27% Similarity=0.328 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH
Q 043484 131 MKEVRKLGETLFGILSVALGLEPEYL 156 (246)
Q Consensus 131 ~~~~~~l~~~ll~~la~~Lgl~~~~l 156 (246)
.++-++|+..|.+++++.||++++.+
T Consensus 14 ~eqK~~L~~~it~~l~~~lg~p~~~v 39 (76)
T 3ej9_A 14 DEQKRALSAGLLRVISEATGEPRENI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHCcCcccE
Confidence 45667899999999999999998654
No 24
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=20.47 E-value=74 Score=22.87 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHH
Q 043484 132 KEVRKLGETLFGILSVALGLEPEYL 156 (246)
Q Consensus 132 ~~~~~l~~~ll~~la~~Lgl~~~~l 156 (246)
.+-++++..|.+++.+.||++++.+
T Consensus 70 ~~n~~~s~~i~~~l~~~Lgi~~~ri 94 (114)
T 3djh_A 70 AQNRSYSKLLCGLLAERLRISPDRV 94 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceE
Confidence 4556788889999999999998653
No 25
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=20.16 E-value=73 Score=19.48 Aligned_cols=42 Identities=17% Similarity=0.290 Sum_probs=32.0
Q ss_pred CCchhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHhcCCChHHHhhc
Q 043484 113 QLPEVCRYKLYPYTTMAHMKEVRKLGETLFGILSVALGLEPEYLKGM 159 (246)
Q Consensus 113 ~~P~~fr~~~~~y~~~~~~~~~~~l~~~ll~~la~~Lgl~~~~l~~~ 159 (246)
+|...-...+.+| ...-.++...-+.-.|.-|||....++..
T Consensus 3 qwseeverklkef-----vrrhqeitqetlheyaqklglnqqaieqf 44 (52)
T 1y66_A 3 QWSEEVERKLKEF-----VRRHQEITQETLHEYAQKLGLNQQAIEQF 44 (52)
T ss_dssp CCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhCccHHHHHHH
Confidence 4666666677888 88888888888888899999876655543
No 26
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=20.04 E-value=53 Score=23.47 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhcCCChHHHhhc-cCCCccccEE
Q 043484 137 LGETLFGILSVALGLEPEYLKGM-GCSNGYDFVY 169 (246)
Q Consensus 137 l~~~ll~~la~~Lgl~~~~l~~~-~~~~~~~~r~ 169 (246)
=+.+|++.+|+.|+++..+|.+. ...+.-.+|+
T Consensus 18 eG~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 18 AGVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 46788999999999999999885 3344445666
Done!