BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043487
MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD
FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEVDYRVYNS

High Scoring Gene Products

Symbol, full name Information P value
ABCC2
AT2G34660
protein from Arabidopsis thaliana 2.2e-36
ABCC1
ATP-binding cassette C1
protein from Arabidopsis thaliana 4.7e-36
ABCC11
ATP-binding cassette C11
protein from Arabidopsis thaliana 5.5e-26

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043487
        (119 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2061559 - symbol:ABCC2 "ATP-binding cassette C...   406  2.2e-36   1
TAIR|locus:2204202 - symbol:ABCC1 "ATP-binding cassette C...   403  4.7e-36   1
TAIR|locus:2028155 - symbol:ABCC11 "ATP-binding cassette ...   308  5.5e-26   1


>TAIR|locus:2061559 [details] [associations]
            symbol:ABCC2 "ATP-binding cassette C2" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006810
            "transport" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0042626 "ATPase activity, coupled to transmembrane movement of
            substances" evidence=IEA;ISS;IDA] [GO:0055085 "transmembrane
            transport" evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0000325 "plant-type vacuole" evidence=IDA] [GO:0005774
            "vacuolar membrane" evidence=IDA] [GO:0009407 "toxin catabolic
            process" evidence=RCA] [GO:0010583 "response to cyclopentenone"
            evidence=RCA] InterPro:IPR001140 InterPro:IPR003439
            InterPro:IPR003593 InterPro:IPR011527 InterPro:IPR017871
            Pfam:PF00005 Pfam:PF00664 PROSITE:PS00211 PROSITE:PS50893
            SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005774
            EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG1132
            GO:GO:0042626 InterPro:IPR017940 SUPFAM:SSF90123 PROSITE:PS50929
            GO:GO:0008559 GO:GO:0000325 ProtClustDB:PLN03130 EMBL:AF014960
            EMBL:AF020288 EMBL:AF020289 EMBL:AC003096 EMBL:Z26467 EMBL:U96400
            IPI:IPI00528135 PIR:T01369 RefSeq:NP_001189675.1 RefSeq:NP_181013.1
            UniGene:At.19665 ProteinModelPortal:Q42093 SMR:Q42093 IntAct:Q42093
            STRING:Q42093 TCDB:3.A.1.208.5 PaxDb:Q42093 PRIDE:Q42093
            EnsemblPlants:AT2G34660.1 EnsemblPlants:AT2G34660.2 GeneID:818031
            KEGG:ath:AT2G34660 TAIR:At2g34660 InParanoid:Q42093 OMA:TVIISKM
            PhylomeDB:Q42093 Genevestigator:Q42093 GermOnline:AT2G34660
            Uniprot:Q42093
        Length = 1623

 Score = 406 (148.0 bits), Expect = 2.2e-36, P = 2.2e-36
 Identities = 74/111 (66%), Positives = 87/111 (78%)

Query:     1 MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
             M  + ++WYC+PV NGVWTK V NAFGAY PCATDS V+ +S L+L+ LC YRIWL  KD
Sbjct:     1 MGFEFIEWYCKPVPNGVWTKQVANAFGAYTPCATDSFVLGISQLVLLVLCLYRIWLALKD 60

Query:    61 FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFE 111
              KV+RFCL+S+LYNY L  LAAY TA+PLF+LIMGIS LD DG  GL PFE
Sbjct:    61 HKVERFCLRSRLYNYFLALLAAYATAEPLFRLIMGISVLDFDGP-GLPPFE 110


>TAIR|locus:2204202 [details] [associations]
            symbol:ABCC1 "ATP-binding cassette C1" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0042626
            "ATPase activity, coupled to transmembrane movement of substances"
            evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0000325 "plant-type vacuole"
            evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            [GO:0015446 "arsenite-transmembrane transporting ATPase activity"
            evidence=IDA] [GO:0015700 "arsenite transport" evidence=IDA]
            [GO:0046685 "response to arsenic-containing substance"
            evidence=IMP] [GO:0071992 "phytochelatin transmembrane transporter
            activity" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
            [GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0008559
            "xenobiotic-transporting ATPase activity" evidence=IMP]
            InterPro:IPR001140 InterPro:IPR003439 InterPro:IPR003593
            InterPro:IPR011527 InterPro:IPR017871 Pfam:PF00005 Pfam:PF00664
            PROSITE:PS00211 PROSITE:PS50893 SMART:SM00382 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005524
            GO:GO:0005774 GO:GO:0046685 eggNOG:COG1132 InterPro:IPR017940
            SUPFAM:SSF90123 PROSITE:PS50929 GO:GO:0008559 EMBL:AC025295
            GO:GO:0000325 EMBL:AF008124 EMBL:AF008125 EMBL:AY090258 EMBL:U96398
            IPI:IPI00519163 PIR:D86428 RefSeq:NP_001031116.1 RefSeq:NP_174329.1
            UniGene:At.21491 ProteinModelPortal:Q9C8G9 SMR:Q9C8G9 IntAct:Q9C8G9
            STRING:Q9C8G9 TCDB:3.A.1.208.21 PaxDb:Q9C8G9 PRIDE:Q9C8G9
            EnsemblPlants:AT1G30400.1 EnsemblPlants:AT1G30400.2 GeneID:839920
            KEGG:ath:AT1G30400 TAIR:At1g30400 InParanoid:Q9C8G9 OMA:DISRERW
            PhylomeDB:Q9C8G9 ProtClustDB:PLN03130 Genevestigator:Q9C8G9
            GermOnline:AT1G30400 GO:GO:0015446 GO:GO:0071992 GO:GO:0015700
            Uniprot:Q9C8G9
        Length = 1622

 Score = 403 (146.9 bits), Expect = 4.7e-36, P = 4.7e-36
 Identities = 71/111 (63%), Positives = 87/111 (78%)

Query:     1 MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
             M  +PLDWYC+PV NGVWTK VD AFGAY PCA DS V+ +SHL+L+ LC YR+WLI KD
Sbjct:     1 MGFEPLDWYCKPVPNGVWTKTVDYAFGAYTPCAIDSFVLGISHLVLLILCLYRLWLITKD 60

Query:    61 FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFE 111
              KV +FCL+SK ++Y L  LAAY TA+PLF+L+M IS LDLDG +G  P+E
Sbjct:    61 HKVDKFCLRSKWFSYFLALLAAYATAEPLFRLVMRISVLDLDG-AGFPPYE 110


>TAIR|locus:2028155 [details] [associations]
            symbol:ABCC11 "ATP-binding cassette C11" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0042626
            "ATPase activity, coupled to transmembrane movement of substances"
            evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
            evidence=IEA] InterPro:IPR001140 InterPro:IPR003439
            InterPro:IPR003593 InterPro:IPR011527 InterPro:IPR017871
            Pfam:PF00005 Pfam:PF00664 PROSITE:PS00211 PROSITE:PS50893
            SMART:SM00382 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005524 eggNOG:COG1132 GO:GO:0042626 InterPro:IPR017940
            SUPFAM:SSF90123 PROSITE:PS50929 GO:GO:0008559 EMBL:AC009917
            EMBL:AC025295 IPI:IPI00535365 PIR:F86428 RefSeq:NP_174331.2
            UniGene:At.51838 ProteinModelPortal:Q9C8H1 SMR:Q9C8H1 PRIDE:Q9C8H1
            EnsemblPlants:AT1G30420.1 GeneID:839922 KEGG:ath:AT1G30420
            TAIR:At1g30420 InParanoid:Q9C8H1 OMA:MNNYSAR PhylomeDB:Q9C8H1
            ProtClustDB:PLN03232 Genevestigator:Q9C8H1 GermOnline:AT1G30420
            Uniprot:Q9C8H1
        Length = 1495

 Score = 308 (113.5 bits), Expect = 5.5e-26, P = 5.5e-26
 Identities = 54/112 (48%), Positives = 75/112 (66%)

Query:     1 MALKPLDWYCRPVANGVWTKVVDNAFGAYIPCATDSLVVSVSHLILMGLCFYRIWLIKKD 60
             M  + L+WYC+P+A G W K  D AFGAY PCA DSLV+ VS+ +L+GLCFYRIW+   +
Sbjct:     1 MGFEALNWYCKPIAEGFWEKTPDGAFGAYTPCAIDSLVMIVSNSVLLGLCFYRIWITLYN 60

Query:    61 FKVQRFCLKSKLYNYMLGFLAAYCTAKPLFQLIMGISALDLDGQSGLAPFEV 112
              K Q + L+   Y+ +L  LA  C  +P+ +L+MGIS  D+  ++ L PFEV
Sbjct:    61 AKAQIYVLRKMYYHCVLWILACCCVVEPVLRLVMGISLFDMGDETDLPPFEV 112


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.143   0.470    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      119       119   0.00091  102 3  11 22  0.40    30
                                                     29  0.47    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  138 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.38u 0.14s 10.52t   Elapsed:  00:00:00
  Total cpu time:  10.38u 0.14s 10.52t   Elapsed:  00:00:00
  Start:  Fri May 10 05:14:14 2013   End:  Fri May 10 05:14:14 2013

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