BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043490
(589 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224135801|ref|XP_002327307.1| predicted protein [Populus trichocarpa]
gi|222835677|gb|EEE74112.1| predicted protein [Populus trichocarpa]
Length = 527
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/546 (73%), Positives = 450/546 (82%), Gaps = 26/546 (4%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSL 110
MYAK G LD AR +FDEM +RNVVSWTALISGYAQHG + ECF LF +L +PNEF+
Sbjct: 1 MYAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDMLVDCYPNEFAF 60
Query: 111 ASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD-------EAWKVFENM 163
ASV+ISCDY+ GK VHALALK L A VYV NALI YSKSC D EA +VFE+M
Sbjct: 61 ASVIISCDYVCGKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYGSEACRVFESM 120
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
EFRN++SWNSMIAA EEEAL LFRQL REG+APDWCTFSIVL
Sbjct: 121 EFRNLVSWNSMIAA-------------------EEEALLLFRQLYREGLAPDWCTFSIVL 161
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
KACAG VTERHA AV+S + K GFEDD V+AN LIHAYARCGSIS SKQVFDKM D+V
Sbjct: 162 KACAGFVTERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDVV 221
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
SWNS++KAYALHGQAKEAL LFS MNV+PDSAT V+LLSACSHAGLV+EG +F SM N
Sbjct: 222 SWNSMIKAYALHGQAKEALHLFSEMNVRPDSATMVALLSACSHAGLVEEGINIFDSMSMN 281
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL 403
HGV PQLDHYACMVD+LGR G +LEA +LI MPM+PDSV+WS LL SCRK+GET+LA+L
Sbjct: 282 HGVSPQLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKL 341
Query: 404 AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVH 463
AA KLK+LEPG+SLG+VQ+SNIYC GS+N+A LIR EM GSRVRK PGLSWIEIENRVH
Sbjct: 342 AADKLKELEPGNSLGYVQISNIYCSGGSYNEAGLIRDEMNGSRVRKEPGLSWIEIENRVH 401
Query: 464 EFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLAL 523
EFASGG+RHPQREAI+ KL LIGQLKG+GYVPETSLAL DIEEEHK+EQLYHHSEKLAL
Sbjct: 402 EFASGGRRHPQREAIYAKLYSLIGQLKGVGYVPETSLALQDIEEEHKQEQLYHHSEKLAL 461
Query: 524 VFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRIC 583
VFA+M++GSLC VIRI+KNIRICVDCHNFMKLASDLL KEIVVRDSNRFHHFK+R+C
Sbjct: 462 VFALMSEGSLCCGGGVIRIVKNIRICVDCHNFMKLASDLLQKEIVVRDSNRFHHFKNRMC 521
Query: 584 SCNDYW 589
SCNDYW
Sbjct: 522 SCNDYW 527
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ + ACA + A+ ++ ++ D + N LI+ YA+ G + ++ +FD+
Sbjct: 157 FSIVLKACAGFVTERHALAVYSQVVK--AGFEDDRVLANTLIHAYARCGSISFSKQVFDK 214
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLV 125
M R+VVSW ++I YA HG A+E LF + P+ ++ ++L +C H LV
Sbjct: 215 MRSRDVVSWNSMIKAYALHGQAKEALHLFSEM--NVRPDSATMVALLSACS--HAGLV 268
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/592 (55%), Positives = 420/592 (70%), Gaps = 28/592 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK-FGYLDDARHLFD 66
+A++ AC G+ Q+H + + ++V N LI MY K G D+A ++++
Sbjct: 168 FASVISACG--GDDNCGRQVHALALKTSFDSC--VYVGNALIMMYCKSCGGADEAWNVYE 223
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGK--- 123
M RN+VSW ++I+G+ G LF + + + + SC G
Sbjct: 224 AMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLE 283
Query: 124 ---LVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFR-NVISWNSMIAA 177
+ L +K + VA AL+ YS + + +++F ++ R +V+SW +IAA
Sbjct: 284 CCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAA 343
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F ++ ++AL +FRQ RE +APD FSIVLKACAGL TERHA
Sbjct: 344 FAE--------------RDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALT 389
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
V S + K GFEDD V+ANALIHA ARCGS++LSKQVFDKM D VSWNS+LKAYA+HGQ
Sbjct: 390 VQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQ 449
Query: 298 AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
KEAL LFS M+ QPD ATFV+LLSACSHAG+ +EG K+F +M NHG+VPQLDHYACMV
Sbjct: 450 GKEALLLFSQMDAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMV 509
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR G+I EA++LI +MPMEPDSV+WS LLGSCRKHGET+LA+LAA KLK+L+P +SL
Sbjct: 510 DILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSL 569
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
G+V MSNI+C G FN+ARLIR+EM+G VRK PGLSWIE+ N+VHEFASGG++HP++EA
Sbjct: 570 GYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEA 629
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +LEEL+ +LK +GYVP+ SLALHDIE+EHKEEQLY+HSEKLAL FA+MN GS+C
Sbjct: 630 ICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSG 689
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+IMKNIRICVDCHNFMKLAS+L+ EIVVRDSNRFHHFK ++CSCNDYW
Sbjct: 690 NTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 234/433 (54%), Gaps = 38/433 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+HS YA LF ACA ++ + LH HM + PN +LF+TNH++NMYAK G LD
Sbjct: 59 LVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDY 118
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC--D 118
A +FDEMP++N+VSWTAL+SGYAQHG + ECFR+F +L + P EF+ ASV+ +C D
Sbjct: 119 AHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWHQPTEFAFASVISACGGD 178
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIA 176
G+ VHALALK S D+ VYV NALI MY KSC ADEAW V+E M FRN++SWNSMIA
Sbjct: 179 DNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIA 238
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F+ C +A+ELF+ Q+ G+ D T + G+
Sbjct: 239 GFQVCGCGNRALELFS-------------QMHVGGIRFDRATLVSIFSCLCGMGDGLECC 285
Query: 237 -AVHSLIAKYGFEDDTVIANALIHAYARCGS-ISLSKQVFDKMT-YHDLVSWNSILKAYA 293
+ L K GF +A AL+ AY+ G +S ++F ++ D+VSW I+ A+A
Sbjct: 286 FQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFA 345
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACS------HAGLVQEGNKVFHSMLENH 344
K+AL +F + PD F +L AC+ HA VQ + V E+
Sbjct: 346 -ERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQ--SHVLKVGFEDD 402
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
V+ +AC R G + ++++ +M D+V W+ +L + HG+ + A L
Sbjct: 403 IVLANALIHAC-----ARCGSVALSKQVFDKMGSR-DTVSWNSMLKAYAMHGQGKEALLL 456
Query: 405 ATKLKQLEPGDSL 417
+++ G +
Sbjct: 457 FSQMDAQPDGATF 469
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 334/605 (55%), Positives = 423/605 (69%), Gaps = 40/605 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK-----FGYL---D 59
+A+L AC H +IK MQ+H + + +++V N LI MY+K GY D
Sbjct: 195 FASLLSACEEH-DIKCGMQVHAVALK--ISLDANVYVANSLITMYSKRSGFGGGYAQTPD 251
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF----CSLLQYFFPNEFSLASVLI 115
DA +F M RN+VSW ++I+ + G ++ LF C+ + + S+ S L
Sbjct: 252 DAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLN 311
Query: 116 SC---DYLHGKL-----VHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEF 165
C D ++ L +H L +K L + + V ALI Y+ + +++F +
Sbjct: 312 ECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSS 371
Query: 166 R-NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
+ +++SW ++I+ F ++ E+A LF QL R+ PDW TFSI LK
Sbjct: 372 QLDIVSWTALISVFAE--------------RDPEQAFLLFCQLHRQSYLPDWYTFSIALK 417
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA VTE+HA A+HS + K GF++DTV+ NAL+HAYARCGS++LS+QVF++M HDLVS
Sbjct: 418 ACAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVS 477
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
WNS+LK+YA+HGQAK+AL+LF MNV PDSATFV+LLSACSH GLV EG K+F+SM ++H
Sbjct: 478 WNSMLKSYAIHGQAKDALELFQQMNVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDH 537
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
GVVPQLDHY+CMVDL GR G+I EAE+LIR+MPM+PDSVIWS LLGSCRKHGETRLA+LA
Sbjct: 538 GVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLA 597
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
A K K+LEP +SLG+VQMSNIY GSF KA LIR EM +VRK PGLSW+EI +VHE
Sbjct: 598 ADKFKELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHE 657
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F SGG+ HP R AI +LE +IGQLK MGYVPE SLAL+D E EHKE+QL+HHSEK+ALV
Sbjct: 658 FGSGGQYHPNRGAILSRLEIVIGQLKEMGYVPELSLALYDTEVEHKEDQLFHHSEKMALV 717
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
FAIMN+GSL +VI+IMKNIRICVDCHNFMKLAS L KEIVVRDSNRFH FK CS
Sbjct: 718 FAIMNEGSLPCGGNVIKIMKNIRICVDCHNFMKLASYLFQKEIVVRDSNRFHRFKYATCS 777
Query: 585 CNDYW 589
CNDYW
Sbjct: 778 CNDYW 782
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 165/423 (39%), Positives = 231/423 (54%), Gaps = 42/423 (9%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S Q YA+LFHACA ++ M LH ++++ P D+F+TNH+INMY K G+L AR+
Sbjct: 89 SLQTYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARY 148
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC---DYL 120
+FD+M RN+VSWTALISG+AQ G ECF LF LL +F PNEF+ AS+L +C D
Sbjct: 149 VFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSGLLAHFRPNEFAFASLLSACEEHDIK 208
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK---------SCADEAWKVFENMEFRNVISW 171
G VHA+ALK SLDA+VYVAN+LI MYSK D+AW +F++MEFRN++SW
Sbjct: 209 CGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSW 268
Query: 172 NSMIAAFRACKLEAQAIELFAKMK------NEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
NSMIA F+ L +AI LFA M + L +F L G T+ L+
Sbjct: 269 NSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTY---LRK 325
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS-ISLSKQVF-DKMTYHDLV 283
C L H L K G + + ALI +YA G IS ++F D + D+V
Sbjct: 326 CFQL---------HCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIV 376
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSM 340
SW +++ +A ++A LF ++ Q PD TF L AC++ + ++ HS
Sbjct: 377 SWTALISVFA-ERDPEQAFLLFCQLHRQSYLPDWYTFSIALKACAYF-VTEQHAMAIHSQ 434
Query: 341 LENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+ G Q D C ++ R G + +E++ EM D V W+ +L S HG+
Sbjct: 435 VIKKGF--QEDTVLCNALMHAYARCGSLALSEQVFNEMGCH-DLVSWNSMLKSYAIHGQA 491
Query: 399 RLA 401
+ A
Sbjct: 492 KDA 494
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/612 (51%), Positives = 412/612 (67%), Gaps = 50/612 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK----FG-----YL 58
+A++ AC ++K +Q+H + + ++V N LI MY+K FG
Sbjct: 183 FASVLCACE-EQDVKYGLQVHAAALK--MSLDFSVYVANALITMYSKCSGGFGGSCDQTT 239
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF----CSLLQYFFPNEFSLASVL 114
DDA +F M RN++SW ++ISG+ G ++ LF C+ +++ N +L VL
Sbjct: 240 DDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRF---NSTTLLGVL 296
Query: 115 ISCDYLHGK--------------LVHALALKFSLDAHVYVANALINMYSKSCA--DEAWK 158
S ++ +H L +K L + V V AL+ Y+ + +K
Sbjct: 297 SSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFK 356
Query: 159 VFENMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F + +++SW ++I+ F ++ E+A LF QL RE D
Sbjct: 357 LFLDTSGEHDIVSWTAIISVFAE--------------RDPEQAFLLFCQLHRENFVLDRH 402
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
TFSI LKACA VTE++A+ VHS + K GF +DTV++NALIHAY R GS++LS+QVF +M
Sbjct: 403 TFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEM 462
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
HDLVSWNS+LK+YA+HG+AK+AL LF M+V PDSATFV+LL+ACSHAGLV+EG ++F
Sbjct: 463 GCHDLVSWNSMLKSYAIHGRAKDALDLFKQMDVHPDSATFVALLAACSHAGLVEEGTQIF 522
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+SM E+HG+ P LDHY+CMVDL GR G+I EAE+LIR+MPM+PDSVIWS LLGSCRKHGE
Sbjct: 523 NSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGE 582
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
LA+LAA K K L+P +SL ++QMSNIY GSF +A LIRKEM+ S+VRK PGLSW+E
Sbjct: 583 ADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVE 642
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHH 517
+ +VHEF SGG+ HP+R+AI +LE LIGQLK MGY PE ALHDIE EH E+QL+HH
Sbjct: 643 VGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHH 702
Query: 518 SEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHH 577
SEK+ALVFAIMN+G +VI+IMKNIRICVDCHNFMKLAS L KEIVVRDSNRFHH
Sbjct: 703 SEKMALVFAIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHH 762
Query: 578 FKDRICSCNDYW 589
FK CSCNDYW
Sbjct: 763 FKYATCSCNDYW 774
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 233/444 (52%), Gaps = 40/444 (9%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ Q YA LFHACA IKQ M LH +++N P D+F+TN+L+NMY K G+LD AR+
Sbjct: 77 TLQDYAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARY 136
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC---DYL 120
LFD+MP+RN VSWT L+SGYAQ G ECF LF +L F PNEF+ ASVL +C D
Sbjct: 137 LFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLACFRPNEFAFASVLCACEEQDVK 196
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-------SC---ADEAWKVFENMEFRNVIS 170
+G VHA ALK SLD VYVANALI MYSK SC D+AW VF++ME+RN+IS
Sbjct: 197 YGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLIS 256
Query: 171 WNSMIAAFRACKLEAQAIELFAKMK------NEEEALFLFRQLQREGMAPDWCTFSIVLK 224
WNSMI+ F+ L +AI LFA M N L + L D + LK
Sbjct: 257 WNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLK 316
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS-ISLSKQVF-DKMTYHDL 282
C L H L K G + + AL+ +YA G IS ++F D HD+
Sbjct: 317 NCFQL---------HCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDI 367
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV-FH 338
VSW +I+ +A ++A LF + N D TF L AC++ V E N H
Sbjct: 368 VSWTAIISVFA-ERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAY--FVTEKNATEVH 424
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
S + G ++ GR G + +E++ EM D V W+ +L S HG
Sbjct: 425 SQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCH-DLVSWNSMLKSYAIHGRA 483
Query: 399 RLAELAATKLKQLEPGDSLGFVQM 422
+ A L K + P DS FV +
Sbjct: 484 KDA-LDLFKQMDVHP-DSATFVAL 505
>gi|449458777|ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
gi|449503335|ref|XP_004161951.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
Length = 629
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 305/571 (53%), Positives = 402/571 (70%), Gaps = 38/571 (6%)
Query: 42 LFVTNHLINMYAKF---------GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEEC 92
++V N LI MY+K DDA +F M ++++W ++I+G+ +
Sbjct: 74 VYVANALITMYSKICSEDGAFKDSKDDDAWTMFKSMENPSLITWNSMIAGFCFRKLGHQA 133
Query: 93 FRLFCSLLQYFFP-NEFSLASVLISCDYLH----GKL------VHALALKFSLDAHVYVA 141
LF + ++ + +L S L S + + G+ +H ALK + + V +
Sbjct: 134 IYLFMQMNRHGIGFDRATLVSTLSSTSFCNRDEFGRRLSFCHQIHCQALKTAFISEVEII 193
Query: 142 NALINMYSKSCAD--EAWKVFENMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
AL+ Y++ D +++++F + R+++ W S++AAF +
Sbjct: 194 TALVKTYAELGGDIADSYRLFVEAGYNRDIVLWTSIMAAFID--------------HDPG 239
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+ L LF Q ++EG+ PD TFSIVLKACAG +TE+HAS HSL+ K ED TV+ NALI
Sbjct: 240 KTLSLFCQFRQEGLTPDGHTFSIVLKACAGFLTEKHASTYHSLLIKSMSEDHTVLNNALI 299
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFV 318
HAY RCGSIS SK+VF++M +HDLVSWN+++KAYALHGQA+ ALQLF+ MNV PD+ TFV
Sbjct: 300 HAYGRCGSISSSKKVFNQMKHHDLVSWNTMMKAYALHGQAEIALQLFTKMNVPPDATTFV 359
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
SLLSACSHAGLV+EG +F+S + N+G+V +LDHYACMVD+LGR G++ EA I MP+
Sbjct: 360 SLLSACSHAGLVEEGTSLFNS-ITNYGIVCRLDHYACMVDILGRSGQVQEAHDFISNMPI 418
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
EPD V+WS LGSCRK+G T LA+LA+ KLK+L+P +SL +VQMSN+YC +GSF +A LI
Sbjct: 419 EPDFVVWSSFLGSCRKYGATGLAKLASYKLKELDPSNSLAYVQMSNLYCFNGSFYEADLI 478
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
R EM GSRV+K PGLS +EIEN+VHEFASGG+ HPQRE I +LE+LIG+LK +GYVPET
Sbjct: 479 RMEMTGSRVKKEPGLSRVEIENQVHEFASGGRCHPQREVICNELEKLIGRLKEIGYVPET 538
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
SLALHD+E+E KE+QLYHHSEKLALVF++MN +L R + IRIMKNIRICVDCHNFMKL
Sbjct: 539 SLALHDVEQEQKEQQLYHHSEKLALVFSVMNDYNLGRVNNPIRIMKNIRICVDCHNFMKL 598
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
AS LL KEIV+RDSNRFHHF +CSCNDYW
Sbjct: 599 ASRLLQKEIVIRDSNRFHHFMAGLCSCNDYW 629
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 196/385 (50%), Gaps = 54/385 (14%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC---DYLHGKL 124
MP+RN VSWT LI+G++Q+G+ +ECF +F +L PNEF+++S+L S D G+
Sbjct: 1 MPRRNYVSWTVLITGFSQYGHVDECFLIFSRMLVDHRPNEFTVSSLLTSFGEHDGERGRQ 60
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA----------DEAWKVFENMEFRNVISWNSM 174
+H ALK SLDA VYVANALI MYSK C+ D+AW +F++ME ++I+WNSM
Sbjct: 61 IHGFALKISLDAFVYVANALITMYSKICSEDGAFKDSKDDDAWTMFKSMENPSLITWNSM 120
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
IA F KL QAI +LF Q+ R G+ D T L + + +
Sbjct: 121 IAGFCFRKLGHQAI-------------YLFMQMNRHGIGFDRATLVSTLSSTSFCNRDEF 167
Query: 235 AS------AVHSLIAKYGFEDDTVIANALIHAYARCGS-ISLSKQVFDKMTYH-DLVSWN 286
+H K F + I AL+ YA G I+ S ++F + Y+ D+V W
Sbjct: 168 GRRLSFCHQIHCQALKTAFISEVEIITALVKTYAELGGDIADSYRLFVEAGYNRDIVLWT 227
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN-KVFHSML- 341
SI+ A+ H K L LF + PD TF +L AC AG + E + +HS+L
Sbjct: 228 SIMAAFIDHDPGK-TLSLFCQFRQEGLTPDGHTFSIVLKAC--AGFLTEKHASTYHSLLI 284
Query: 342 ----ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
E+H V+ ++ GR G I ++K+ +M D V W+ ++ + HG+
Sbjct: 285 KSMSEDHTVLNN-----ALIHAYGRCGSISSSKKVFNQMKHH-DLVSWNTMMKAYALHGQ 338
Query: 398 TRLAELAATKLKQLEPGDSLGFVQM 422
+A TK+ P D+ FV +
Sbjct: 339 AEIALQLFTKMNV--PPDATTFVSL 361
>gi|297734800|emb|CBI17034.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 294/592 (49%), Positives = 380/592 (64%), Gaps = 75/592 (12%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK-FGYLDDARHLFD 66
+A++ AC G+ Q+H + + ++V N LI MY K G D+A ++++
Sbjct: 12 FASVISACG--GDDNCGRQVHALALKTSFDSC--VYVGNALIMMYCKSCGGADEAWNVYE 67
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGK--- 123
M RN+VSW ++I+G+ G LF + + + + SC G
Sbjct: 68 AMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLE 127
Query: 124 ---LVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFR-NVISWNSMIAA 177
+ L +K + VA AL+ YS + + +++F ++ R +V+SW +IAA
Sbjct: 128 CCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAA 187
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F ++ ++AL +FRQ RE +APD FSIVLKACAGL TERHA
Sbjct: 188 FAE--------------RDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALT 233
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
V S + K GFEDD V+ANALIHA ARCGS++LSKQVFDKM D VSWNS+LKAYA+HGQ
Sbjct: 234 VQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQ 293
Query: 298 AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
KEAL LFS M+ QPD ATFV+LLSACSHAG+ +EG K+F +M NHG+VPQLDHYACMV
Sbjct: 294 GKEALLLFSQMDAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMV 353
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR G+I EA++LI +MPMEPDSV+WS LLGSCRKHGET+LA+LAA KLK+L+P +SL
Sbjct: 354 DILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSL 413
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
G+V MSNI+C G FN+ARLIR+EM+G VRK PGLSWIE+ N+VHEFASGG++HP++EA
Sbjct: 414 GYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEA 473
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +LEEL+ +LK +GY
Sbjct: 474 ICARLEELVRRLKDLGY------------------------------------------- 490
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IMKNIRICVDCHNFMKLAS+L+ EIVVRDSNRFHHFK ++CSCNDYW
Sbjct: 491 ----IMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 538
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 165/335 (49%), Gaps = 38/335 (11%)
Query: 99 LLQYFFPNEFSLASVLISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--AD 154
+L + P EF+ ASV+ +C D G+ VHALALK S D+ VYV NALI MY KSC AD
Sbjct: 1 MLIWHQPTEFAFASVISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGAD 60
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EAW V+E M FRN++SWNSMIA F+ C +A+ELF+ Q+ G+
Sbjct: 61 EAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFS-------------QMHVGGIRF 107
Query: 215 DWCTFSIVLKACAGLVTERHAS-AVHSLIAKYGFEDDTVIANALIHAYARCGS-ISLSKQ 272
D T + G+ + L K GF +A AL+ AY+ G +S +
Sbjct: 108 DRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYR 167
Query: 273 VFDKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS--- 325
+F ++ D+VSW I+ A+A K+AL +F + PD F +L AC+
Sbjct: 168 IFLELDGRQDVVSWTGIIAAFA-ERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLA 226
Query: 326 ---HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
HA VQ + V E+ V+ +AC R G + ++++ +M D+
Sbjct: 227 TERHALTVQ--SHVLKVGFEDDIVLANALIHAC-----ARCGSVALSKQVFDKMG-SRDT 278
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
V W+ +L + HG+ + A L +++ G +
Sbjct: 279 VSWNSMLKAYAMHGQGKEALLLFSQMDAQPDGATF 313
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+++ + ACA + A+ + H++ F + D+ + N LI+ A+ G + ++ +F
Sbjct: 214 MFSIVLKACAGLATERHALTVQSHVLKVGFED---DIVLANALIHACARCGSVALSKQVF 270
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY 119
D+M R+ VSW +++ YA HG +E LF + P+ + ++L +C +
Sbjct: 271 DKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDAQ--PDGATFVALLSACSH 322
>gi|297734798|emb|CBI17032.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/560 (50%), Positives = 370/560 (66%), Gaps = 65/560 (11%)
Query: 42 LFVTNHLINMYAK-FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++V N LI MY + G D+A ++++ M RN+VSW +I+G+ G +F +
Sbjct: 188 VYVGNVLIMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQM- 246
Query: 101 QYFFPNEFSLASV--LISCDYLHGK------LVHALALKFSLDAHVYVANALINMYSK-- 150
+F F A++ + SC G + L K + + V L+ YS
Sbjct: 247 -HFGGIRFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLG 305
Query: 151 SCADEAWKVFENMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
++ +++F ++ R +V+SW +IA F ++ EEA LFRQ R
Sbjct: 306 GEVNDCYRIFLELDGRQDVVSWTGIIAVFAE--------------RDPEEAFLLFRQFLR 351
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
E +APD FSIVLKACAGL TE HA V S + K GFEDD V+ NALIH ARCGS++L
Sbjct: 352 ECLAPDRHMFSIVLKACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVAL 411
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGL 329
SKQ FDK+ D VSWNS+LKAYA+HGQ KEALQLFS M+ QPD ATFV+L+SACSHAG+
Sbjct: 412 SKQAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQLFSQMDAQPDGATFVALISACSHAGM 471
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+EG K+F +M NHG+VPQLDHYACMVD+LGR GRI EA++LI +MPMEPDS++WS LL
Sbjct: 472 VEEGAKIFEAMSNNHGIVPQLDHYACMVDILGRAGRIYEAKELIDKMPMEPDSMVWSALL 531
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G CRKHGET+ A+LAA KLK+L+P +SLG++ MSNI+ +G FN+ARLIR+EM+ VRK
Sbjct: 532 GGCRKHGETKFAKLAAVKLKELDPNNSLGYILMSNIFSTNGHFNEARLIRREMERKTVRK 591
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PGLSWI++ N+VHEFASGG++HP++EA+ +LEEL+ QLK +GYVP+ SLALHDIE+EH
Sbjct: 592 EPGLSWIQVGNQVHEFASGGQQHPEKEALCARLEELVRQLKDLGYVPQISLALHDIEDEH 651
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KEEQLY+HSEK+ALVF++MN GS+
Sbjct: 652 KEEQLYYHSEKMALVFSLMNAGSI------------------------------------ 675
Query: 570 RDSNRFHHFKDRICSCNDYW 589
SNRFHHFK ++CSCNDYW
Sbjct: 676 -YSNRFHHFKAKVCSCNDYW 694
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 202/386 (52%), Gaps = 28/386 (7%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
LH HM+ + PN +LF+TNH++NMYAK G LD A FDEM +RN+VSWTAL+S YAQH
Sbjct: 75 LHCHMLLHNPNSDFNLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRYAQH 134
Query: 87 GNAEECFRLFCSLLQYFFPNEFSLASVLISC--DYLHGKLVHALALKFSLDAHVYVANAL 144
G +ECFR+F +L P EF+ ASV+ + D G+ VHALA+K S D+ VYV N L
Sbjct: 135 GWPDECFRVFTDMLICHRPTEFAFASVISTSGGDGDCGRQVHALAVKTSFDSCVYVGNVL 194
Query: 145 INMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
I MY +SC DEAW V+E M FRN++SWN MI F+ C +A+E+F+
Sbjct: 195 IMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFS---------- 244
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS-AVHSLIAKYGFEDDTVIANALIHAY 261
Q+ G+ D T + G+ + L K GF + + L+ AY
Sbjct: 245 ---QMHFGGIRFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAY 301
Query: 262 ARCGS-ISLSKQVFDKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
+ G ++ ++F ++ D+VSW I+ +A +EA LF + PD
Sbjct: 302 SSLGGEVNDCYRIFLELDGRQDVVSWTGIIAVFA-ERDPEEAFLLFRQFLRECLAPDRHM 360
Query: 317 FVSLLSACSHAGLVQEGNKV-FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
F +L AC AGL EG+ + S + G + ++ R G + +++ +
Sbjct: 361 FSIVLKAC--AGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVALSKQAFDK 418
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLA 401
+ D+V W+ +L + HG+ + A
Sbjct: 419 IGSR-DTVSWNSMLKAYAMHGQGKEA 443
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+++ + ACA A+ + H++ F + D+ +TN LI+ A+ G + ++ F
Sbjct: 360 MFSIVLKACAGLATEGHALTVQSHVLKVGFED---DIVLTNALIHTCARCGSVALSKQAF 416
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY 119
D++ R+ VSW +++ YA HG +E +LF + P+ + +++ +C +
Sbjct: 417 DKIGSRDTVSWNSMLKAYAMHGQGKEALQLFSQMDAQ--PDGATFVALISACSH 468
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFD 66
+ L AC+ G +++ ++ E M NN PQ D + ++++ + G + +A+ L D
Sbjct: 459 FVALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYAC--MVDILGRAGRIYEAKELID 516
Query: 67 EMP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS 116
+MP + + + W+AL+ G +HG + +L L+ PN SL +L+S
Sbjct: 517 KMPMEPDSMVWSALLGGCRKHGETKFA-KLAAVKLKELDPNN-SLGYILMS 565
>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 744
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 285/572 (49%), Positives = 380/572 (66%), Gaps = 43/572 (7%)
Query: 42 LFVTNHLINMYAKF-----GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
++V N LI+MY + Y +A +F+ M +N+V+W ++I+ + ++ +F
Sbjct: 192 IYVANALISMYGRCHDGTAAY--EAWTVFEAMEFKNLVTWNSMIAAFQCCNLGKQAIGVF 249
Query: 97 CSLLQYFFPNEFSLASVLISCDYLHGK-------------LVHALALKFSLDAHVYVANA 143
+ + F A+VL C L+ +H+L +K L VA A
Sbjct: 250 --MRMHSDGVGFDRATVLNICTTLYKSSDLDPDQVSKCCLQLHSLTVKSGLVTQTEVATA 307
Query: 144 LINMYSKSCAD--EAWKVFENMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
L+ +YS+ + + +K+F M R++++W +I AF + + E A
Sbjct: 308 LVKVYSEILGEFTDCYKLFMEMSHCRDIVAWTGIITAF--------------AVYDPERA 353
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
+ LF QL+ E ++PDW TFS VLKACAGLVT RHA ++H+ + K GF DTV+ N+LIHA
Sbjct: 354 ILLFGQLRHEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVVNNSLIHA 413
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSL 320
YA+CGS+ L K+VFD M D+VSWNS+LKAY+LHGQ L +F M+++PDSATF++L
Sbjct: 414 YAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVDSILPVFQKMDIKPDSATFIAL 473
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
LSACSHAG V+EG ++F SM E +PQL+HYAC++D+LGR R EAE++I++MPM P
Sbjct: 474 LSACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGRAERFAEAEEVIKQMPMGP 533
Query: 381 DSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRK 440
D+V+WS LLGSCRKHG T+L +LAA KLK++EP +SL ++QMSNIY SFN+ K
Sbjct: 534 DAVVWSTLLGSCRKHGNTQLGKLAADKLKEIEPTNSLSYIQMSNIYNAESSFNEGNKSIK 593
Query: 441 EMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSL 500
EM+ RVRK PGLS EI N+VHEF SGG+ P REAI ++LE LI +LK MGYVPE
Sbjct: 594 EMETWRVRKEPGLSCTEIGNKVHEFTSGGRCRPDREAICRELERLISRLKEMGYVPEMRS 653
Query: 501 ALHDIEE-EHKEEQLYHHSEKLALVFAIMNQGSLCRERSV--IRIMKNIRICVDCHNFMK 557
AL IEE E KEE L HHSEKLAL FA+M +G + V I+IMKNIRIC+DCHNFMK
Sbjct: 654 ALQQIEEDEQKEEHLSHHSEKLALAFAVM-EGRKSGDCGVNLIQIMKNIRICIDCHNFMK 712
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
LAS LLGKEI++RDSNRFHHFKD CSCNDYW
Sbjct: 713 LASKLLGKEILLRDSNRFHHFKDSSCSCNDYW 744
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/416 (37%), Positives = 226/416 (54%), Gaps = 39/416 (9%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L S YA LF ACA N++ + LH HM+++ Q++ + N+LI MYAK G + A
Sbjct: 56 LQSQHAYAALFQACADQRNLRDGINLHHHMLSHPYCYSQNVILANYLITMYAKCGNILYA 115
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH 121
R +FD MP+RNVVSWTALI+GYAQ GN ++ F LF S+L + PNEF+L+SVL C Y
Sbjct: 116 RQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSMLAHCCPNEFALSSVLTLCRYEP 175
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK----SCADEAWKVFENMEFRNVISWNSMIAA 177
GK VH LALK L +YVANALI+MY + + A EAW VFE MEF+N+++WNSMIAA
Sbjct: 176 GKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWTVFEAMEFKNLVTWNSMIAA 235
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F+ C L QAI +F +M + +G+ D T VL C L
Sbjct: 236 FQCCNLGKQAIGVFMRMHS-------------DGVGFDRAT---VLNICTTLYKSSDLDP 279
Query: 238 ---------VHSLIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTY-HDLVSWN 286
+HSL K G T +A AL+ Y+ G + ++F +M++ D+V+W
Sbjct: 280 DQVSKCCLQLHSLTVKSGLVTQTEVATALVKVYSEILGEFTDCYKLFMEMSHCRDIVAWT 339
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV-FHSMLE 342
I+ A+A++ + A+ LF + + PD TF S+L AC AGLV + + H+ +
Sbjct: 340 GIITAFAVY-DPERAILLFGQLRHEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVI 396
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
G ++ + G + +++ +M D V W+ LL + HG+
Sbjct: 397 KGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSR-DVVSWNSLLKAYSLHGQV 451
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ ACA + A+ +H +I D V N LI+ YAK G LD + +FD+
Sbjct: 372 FSSVLKACAGLVTARHALSIHAQVIKG--GFATDTVVNNSLIHAYAKCGSLDLCKRVFDD 429
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY 119
M R+VVSW +L+ Y+ HG + +F + P+ + ++L +C +
Sbjct: 430 MDSRDVVSWNSLLKAYSLHGQVDSILPVFQKM--DIKPDSATFIALLSACSH 479
>gi|147809821|emb|CAN66904.1| hypothetical protein VITISV_025136 [Vitis vinifera]
Length = 558
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 286/592 (48%), Positives = 370/592 (62%), Gaps = 86/592 (14%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK-FGYLDDARHLFD 66
+A++ AC G+ Q+H + + ++V N LI MY K G D+A ++++
Sbjct: 43 FASVISACG--GDDNCGRQVHALALKTSFDSC--VYVGNALIMMYCKSCGGADEAWNVYE 98
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGK--- 123
M RN+VSW ++I+G+ G LF + + + + SC G
Sbjct: 99 AMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLE 158
Query: 124 ---LVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFR-NVISWNSMIAA 177
+ L +K + VA AL+ YS + + +++F ++ R +V+SW +IAA
Sbjct: 159 CCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAA 218
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F ++ ++AL +FRQ RE +APD SIVLKACAGL TERHA
Sbjct: 219 FAE--------------RDPKKALVIFRQFLRECLAPDRHMLSIVLKACAGLATERHALT 264
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
V S + K GFEDD V+ANALIHA ARCGS++LSKQVFDKM D VSWNS+LKAYA+HGQ
Sbjct: 265 VQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQ 324
Query: 298 AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A CSHAG+ +EG K+F +M NHG+VPQLDHYACMV
Sbjct: 325 A-------------------------CSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMV 359
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR G+I EA++LI +MPMEPDSV+WS LLGSCRKH
Sbjct: 360 DILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKH---------------------- 397
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
G FN+ARLIR+EM+G VRK PGLSWIE+ N+VHEFASGG++HP++EA
Sbjct: 398 -----------DGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEA 446
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +LEEL+ +LK +GYVP+ SLALHDIE+EHKEEQLY+HSEKLAL FA+MN GS+C
Sbjct: 447 ICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSG 506
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+IMKNIRICVDCHNFMKLAS+L+ EIVVRDSNRFHHFK ++CSCNDYW
Sbjct: 507 NTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 558
>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/571 (48%), Positives = 381/571 (66%), Gaps = 40/571 (7%)
Query: 42 LFVTNHLINMYAKF---GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
++V N +I+MY + +A +F+ + +N+V+W ++I+ + ++ +F
Sbjct: 192 IYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVF-- 249
Query: 99 LLQYFFPNEFSLASVLISCDYLHGK-------------LVHALALKFSLDAHVYVANALI 145
+ + F A++L C L+ +H+L +K L VA ALI
Sbjct: 250 MRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALI 309
Query: 146 NMYSKSCAD--EAWKVFENMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
+YS+ D + +K+F M R++++WN +I AF + + E A+
Sbjct: 310 KVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAF--------------AVYDPERAIH 355
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
LF QL++E ++PDW TFS VLKACAGLVT RHA ++H+ + K GF DTV+ N+LIHAYA
Sbjct: 356 LFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYA 415
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLS 322
+CGS+ L +VFD M D+VSWNS+LKAY+LHGQ L +F M++ PDSATF++LLS
Sbjct: 416 KCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLS 475
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACSHAG V+EG ++F SM E +PQL+HYAC++D+L R R EAE++I++MPM+PD+
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQL-EPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
V+W LLGSCRKHG TRL +LAA KLK+L EP +S+ ++QMSNIY GSFN+A L KE
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKE 595
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET-SL 500
M+ RVRK P LSW EI N+VHEFASGG+ P +EA++++L+ LI LK MGYVPE S
Sbjct: 596 METWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSA 655
Query: 501 ALHDIEEEHKEEQLYHHSEKLALVFAIM--NQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
+ +EE +E+ L HHSEKLAL FA+M + S C ++I+IMKN RIC+DCHNFMKL
Sbjct: 656 SQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDC-GVNLIQIMKNTRICIDCHNFMKL 714
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
AS LLGKEI++RDSNRFHHFKD CSCNDYW
Sbjct: 715 ASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 229/416 (55%), Gaps = 39/416 (9%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L S Q YA LF ACA N+ + LH HM+++ Q++ + N LINMYAK G + A
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH 121
R +FD MP+RNVVSWTALI+GY Q GN +E F LF S+L + FPNEF+L+SVL SC Y
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP 175
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK----SCADEAWKVFENMEFRNVISWNSMIAA 177
GK VH LALK L +YVANA+I+MY + + A EAW VFE ++F+N+++WNSMIAA
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV------- 230
F+ C L +AI +F +M + +G+ D T +L C+ L
Sbjct: 236 FQCCNLGKKAIGVFMRMHS-------------DGVGFDRAT---LLNICSSLYKSSDLVP 279
Query: 231 --TERHASAVHSLIAKYGFEDDTVIANALIHAYAR-CGSISLSKQVFDKMTY-HDLVSWN 286
+ +HSL K G T +A ALI Y+ + ++F +M++ D+V+WN
Sbjct: 280 NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWN 339
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV-FHSMLE 342
I+ A+A++ + A+ LF + + PD TF S+L AC AGLV + + H+ +
Sbjct: 340 GIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVI 396
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
G + ++ + G + ++ +M D V W+ +L + HG+
Sbjct: 397 KGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQV 451
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ ACA + A+ +H +I D + N LI+ YAK G LD +FD+
Sbjct: 372 FSSVLKACAGLVTARHALSIHAQVIKG--GFLADTVLNNSLIHAYAKCGSLDLCMRVFDD 429
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY 119
M R+VVSW +++ Y+ HG + +F + P+ + ++L +C +
Sbjct: 430 MDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM--DINPDSATFIALLSACSH 479
>gi|110741296|dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
Length = 727
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/553 (47%), Positives = 365/553 (66%), Gaps = 40/553 (7%)
Query: 42 LFVTNHLINMYAKF---GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
++V N +I+MY + +A +F+ + +N+V+W ++I+ + ++ +F
Sbjct: 192 IYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVF-- 249
Query: 99 LLQYFFPNEFSLASVLISCDYLHGK-------------LVHALALKFSLDAHVYVANALI 145
+ + F A++L C L+ +H+L +K L VA ALI
Sbjct: 250 MRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALI 309
Query: 146 NMYSKSCAD--EAWKVFENMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
+YS+ D + +K+F M R++++WN +I AF + + E A+
Sbjct: 310 KVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAF--------------AVYDPERAIH 355
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
LF QL++E ++PDW TFS VLKACAGLVT RHA ++H+ + K GF DTV+ N+LIHAYA
Sbjct: 356 LFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYA 415
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLS 322
+CGS+ L +VFD M D+VSWNS+LKAY+LHGQ L +F M++ PDSATF++LLS
Sbjct: 416 KCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLS 475
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACSHAG V+EG ++F SM E +PQL+HYAC++D+L R R EAE++I++MPM+PD+
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQL-EPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
V+W LLGSCRKHG TRL +LAA KLK+L EP +S+ ++QMSNIY GSFN+A L KE
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKE 595
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET-SL 500
M+ RVRK P LSW EI N+VHEFASGG+ P +EA++++L+ LI LK MGYVPE S
Sbjct: 596 METWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSA 655
Query: 501 ALHDIEEEHKEEQLYHHSEKLALVFAIM--NQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
+ +EE +E+ L HHSEKLAL FA+M + S C ++I+IMKN RIC+DCHNFMKL
Sbjct: 656 SQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDC-GVNLIQIMKNTRICIDCHNFMKL 714
Query: 559 ASDLLGKEIVVRD 571
AS LLGKEI++RD
Sbjct: 715 ASKLLGKEILMRD 727
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 229/416 (55%), Gaps = 39/416 (9%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L S Q YA LF ACA N+ + LH HM+++ Q++ + N LINMYAK G + A
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH 121
R +FD MP+RNVVSWTALI+GY Q GN +E F LF S+L + FPNEF+L+SVL SC Y
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP 175
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK----SCADEAWKVFENMEFRNVISWNSMIAA 177
GK VH LALK L +YVANA+I+MY + + A EAW VFE ++F+N+++WNSMIAA
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV------- 230
F+ C L +AI +F +M + +G+ D T +L C+ L
Sbjct: 236 FQCCNLGKKAIGVFMRMHS-------------DGVGFDRAT---LLNICSSLYKSSDLVP 279
Query: 231 --TERHASAVHSLIAKYGFEDDTVIANALIHAYAR-CGSISLSKQVFDKMTY-HDLVSWN 286
+ +HSL K G T +A ALI Y+ + ++F +M++ D+V+WN
Sbjct: 280 NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWN 339
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV-FHSMLE 342
I+ A+A++ + A+ LF + + PD TF S+L AC AGLV + + H+ +
Sbjct: 340 GIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVI 396
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
G + ++ + G + ++ +M D V W+ +L + HG+
Sbjct: 397 KGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQV 451
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ ACA + A+ +H +I D + N LI+ YAK G LD +FD+
Sbjct: 372 FSSVLKACAGLVTARHALSIHAQVIKG--GFLADTVLNNSLIHAYAKCGSLDLCMRVFDD 429
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY 119
M R+VVSW +++ Y+ HG + +F + P+ + ++L +C +
Sbjct: 430 MDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM--DINPDSATFIALLSACSH 479
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/596 (40%), Positives = 368/596 (61%), Gaps = 32/596 (5%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y ++ C I++ ++H HMI P +++ LI +Y K L DAR +
Sbjct: 11 QGYDSVLTECISQTAIREGQRVHAHMIKTCYEPP--VYLRTRLIVLYNKCRCLGDARRVL 68
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCD----YL 120
DEMP+RNVVSWTA+ISGY+Q G A E LF +L PNEF+ A+VL SC +
Sbjct: 69 DEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQ 128
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H+L +K S ++H++V ++L++MY+K+ EA +VF+ + R+V+S ++I+ +
Sbjct: 129 LGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGY- 187
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A++ +EEAL LFR+LQREGM ++ T++ VL A +GL H VH
Sbjct: 188 ------------AQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 235
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S + + V+ N+LI Y++CGS++ S+++FD M ++SWN++L Y+ HG +
Sbjct: 236 SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGR 295
Query: 300 EALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKVFHSML-ENHGVVPQLDHYA 354
EA++LF M V+PDS TF+++LS CSH G+ G ++F+ M+ + G P+++HY
Sbjct: 296 EAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 355
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VDL GR GR+ EA + I++MP EP + IW LLG+CR H + E A +L ++E
Sbjct: 356 CVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE 415
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
++ +V +SN+Y +G ++ R +R+ MK V K PG SWIE++ +H F + + HP+
Sbjct: 416 NAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPR 475
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+E +F K+ EL ++K GYVPE S L+D+++E KE+ L HSEKLAL F G +C
Sbjct: 476 KEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAF-----GLIC 530
Query: 535 RERSV-IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI+KN+RICVDCHNF K S + G+E+ +RD NRFHH CSC DYW
Sbjct: 531 TPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+G+ ++ + VL C R VH+ + K +E + LI Y +C +
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+++V D+M ++VSW +++ Y+ G A EAL LF M P+ TF ++L++C+
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
+ Q G ++ HS++ + + ++D+ + G+I EA ++ +P
Sbjct: 124 SSGFQLGRQI-HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/596 (40%), Positives = 368/596 (61%), Gaps = 32/596 (5%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y ++ C I++ ++H HMI P +++ LI +Y K L DAR +
Sbjct: 478 QGYDSVLTECISQTAIREGQRVHAHMIKTCYEPP--VYLRTRLIVLYNKCRCLGDARRVL 535
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCD----YL 120
DEMP+RNVVSWTA+ISGY+Q G A E LF +L PNEF+ A+VL SC +
Sbjct: 536 DEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQ 595
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H+L +K S ++H++V ++L++MY+K+ EA +VF+ + R+V+S ++I+ +
Sbjct: 596 LGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGY- 654
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A++ +EEAL LFR+LQREGM ++ T++ VL A +GL H VH
Sbjct: 655 ------------AQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 702
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S + + V+ N+LI Y++CGS++ S+++FD M ++SWN++L Y+ HG +
Sbjct: 703 SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGR 762
Query: 300 EALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKVFHSML-ENHGVVPQLDHYA 354
EA++LF M V+PDS TF+++LS CSH G+ G ++F+ M+ + G P+++HY
Sbjct: 763 EAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 822
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VDL GR GR+ EA + I++MP EP + IW LLG+CR H + E A +L ++E
Sbjct: 823 CVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE 882
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
++ +V +SN+Y +G ++ R +R+ MK V K PG SWIE++ +H F + + HP+
Sbjct: 883 NAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPR 942
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+E +F K+ EL ++K GYVPE S L+D+++E KE+ L HSEKLAL F G +C
Sbjct: 943 KEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAF-----GLIC 997
Query: 535 RERSV-IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI+KN+RICVDCHNF K S + G+E+ +RD NRFHH CSC DYW
Sbjct: 998 TPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+G+ ++ + VL C R VH+ + K +E + LI Y +C +
Sbjct: 471 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 530
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+++V D+M ++VSW +++ Y+ G A EAL LF M P+ TF ++L++C+
Sbjct: 531 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 590
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
+ Q G ++ HS++ + + ++D+ + G+I EA ++ +P
Sbjct: 591 SSGFQLGRQI-HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/592 (42%), Positives = 362/592 (61%), Gaps = 29/592 (4%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+Y+ + + C +KQ +H H+ ++ + DL + N ++NMYAK G L++A+ LFD
Sbjct: 107 LYSKMLNKCTYLRKLKQGRAIHAHIQSSTFED--DLVLLNFILNMYAKCGSLEEAQDLFD 164
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----H 121
+MP +++VSWT LISGY+Q G A E LF +L F PNEF+L+S+L + H
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHH 224
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +HA +LK+ D +V+V ++L++MY++ + EA +F ++ +NV+SWN++IA
Sbjct: 225 GRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH-- 282
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ E + LF Q+ R+G P T+S V ACA + VH+
Sbjct: 283 -----------ARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHA 331
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G + I N LI YA+ GSI +K+VF ++ D+VSWNSI+ YA HG E
Sbjct: 332 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 391
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
ALQLF M VQP+ TF+S+L+ACSH+GL+ EG F +++ H + Q+ H+ +V
Sbjct: 392 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHHVTVV 450
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR GR+ EA K I EMP++P + +W LLGSCR H L AA ++ +L+P DS
Sbjct: 451 DLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSG 510
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V +SNIY +G + A +RK MK S V+K P SW+EIEN VH F + HP RE
Sbjct: 511 PHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREE 570
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I + E++ G++K +GYVP+TS L + ++ +E +L +HSEKLAL FA++
Sbjct: 571 IQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGL--- 627
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KNIRIC DCH+ K AS +LG+EI+VRD+NRFHHF +CSC DYW
Sbjct: 628 -TIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L++ + + P+ +S +L C L + A+H+ I FEDD V+ N +++
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
YA+CGS+ ++ +FDKM D+VSW ++ Y+ GQA EAL LF M QP+ T
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
SLL A S G + H+ +G + + ++D+ R + EA+ + +
Sbjct: 210 SSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 378 MEPDSVIWSVLLGSCRKHGE 397
+ + V W+ L+ + GE
Sbjct: 269 AK-NVVSWNALIAGHARKGE 287
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/592 (42%), Positives = 363/592 (61%), Gaps = 30/592 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+Y+ + + C +KQ +H H+ ++ + DL + N ++NMYAK G L++A+ LFD
Sbjct: 107 LYSKMLNKCTYLRKLKQGRAIHAHIQSSTFED--DLVLLNFILNMYAKCGSLEEAQDLFD 164
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----H 121
+MP +++VSWT LISGY+Q G A E LF +L F PNEF+L+S+L + H
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHH 224
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +HA +LK+ D +V+V ++L++MY++ + EA +F ++ +NV+SWN++IA
Sbjct: 225 GRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH-- 282
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ E + LF Q+ R+G P T+S VL ACA + VH+
Sbjct: 283 -----------ARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHA 330
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G + I N LI YA+ GSI +K+VF ++ D+VSWNSI+ YA HG E
Sbjct: 331 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 390
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
ALQLF M VQP+ TF+S+L+ACSH+GL+ EG F +++ H + Q+ H+ +V
Sbjct: 391 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHHVTVV 449
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR GR+ EA K I EMP++P + +W LLG+CR H L AA ++ +L+P DS
Sbjct: 450 DLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSG 509
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V +SNIY +G + A +RK MK S V+K P SW+EIEN VH F + HP RE
Sbjct: 510 PHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREE 569
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I + E++ G++K +GYVP+TS L + ++ +E +L +HSEKLAL FA++
Sbjct: 570 IQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGL--- 626
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KNIRIC DCH+ K AS +LG+EI+VRD+NRFHHF +CSC DYW
Sbjct: 627 -TIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 178/388 (45%), Gaps = 26/388 (6%)
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L++ + + P+ +S +L C L + A+H+ I FEDD V+ N +++
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
YA+CGS+ ++ +FDKM D+VSW ++ Y+ GQA EAL LF M QP+ T
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
SLL A S G + H+ +G + + ++D+ R + EA+ + +
Sbjct: 210 SSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 378 MEPDSVIWSVLL-GSCRKHGETRLAELAATKLKQ-LEPGDSLGFVQMSNIYCL-SGSFNK 434
+ + V W+ L+ G RK + L L+Q EP F S + C SGS +
Sbjct: 269 AK-NVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTH---FTYSSVLACASSGSLEQ 324
Query: 435 ARLIRKEM--KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL--EELIGQ-- 488
+ + + G + Y G + I++ + SG + ++ +F++L ++++
Sbjct: 325 GKWVHAHVIKSGGQPIAYIGNTLIDMYAK-----SGSIKDAKK--VFRRLVKQDIVSWNS 377
Query: 489 -LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
+ G + AL E+ K + + L+++ A + G L + +MK +
Sbjct: 378 IISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 437
Query: 548 ICVDCHNFMKLASDLLGKEIVVRDSNRF 575
I + + + DLLG+ + ++N+F
Sbjct: 438 IEAQVAHHVTVV-DLLGRAGRLNEANKF 464
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/587 (41%), Positives = 360/587 (61%), Gaps = 26/587 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L C+ G +++ ++HEH+ EP+ +FV N L+NMY KF L++A LFDE
Sbjct: 58 YSELIKCCSARGAVQEGKRVHEHIFCK-GYEPK-MFVVNTLLNMYVKFNLLEEAEDLFDE 115
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG-KLVH 126
MP+RNVVSWT +IS Y+ N + L + PN F+ +SVL +CD L + +H
Sbjct: 116 MPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLH 175
Query: 127 ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+K L++ V+V +ALI++YSK S D A VF+ M R+++ WNS+I F
Sbjct: 176 CGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGF------- 228
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
A+ + EAL LF++++R G D T + VL+AC GL VH + K
Sbjct: 229 ------AQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK- 281
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
F+ D ++ NALI Y +CGS+ + F +M D++SW++++ A +G +++AL+LF
Sbjct: 282 -FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELF 340
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+M +P+ T + +L ACSHAGLV++G F SM + GV P +HY C++DLLGR
Sbjct: 341 ESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGR 400
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
GR+ EA KLI EM EPDSV W LLG+CR H LA AA K+ +LEP D+ ++ +
Sbjct: 401 AGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILL 460
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
SNIY + + +RK M +RK PG SWIE++ ++H F G HP+ E I ++L
Sbjct: 461 SNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRL 520
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
+LI ++ G+GYVP+T+ L D+E E KE+ L +HSEKLA++F +MN L RE++V RI
Sbjct: 521 NDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMN---LSREKTV-RI 576
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+RIC DCH F K+ S + + IV+RD R+HHF+D +CSC DYW
Sbjct: 577 RKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 23/195 (11%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
++R G+ D T+S ++K C+ + VH I G+E + N L++ Y +
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYA--LHGQAKEALQLFSNMNVQPDSATFVSLLSAC 324
+ ++ +FD+M ++VSW +++ AY+ L+ +A + L L V+P+ T+ S+L AC
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRAC 165
Query: 325 S--------HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
H G+++ G LE+ V + ++D+ + + A + EM
Sbjct: 166 DGLPNLRQLHCGIIKTG-------LESDVFV-----RSALIDVYSKWSDLDNALGVFDEM 213
Query: 377 PMEPDSVIWSVLLGS 391
P D V+W+ ++G
Sbjct: 214 PTR-DLVVWNSIIGG 227
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 292 YALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+ LH +A A+ V D+ T+ L+ CS G VQEG +V H + G P++
Sbjct: 34 WDLH-RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRV-HEHIFCKGYEPKMF 91
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
++++ + + EAE L EMP E + V W+ ++ +
Sbjct: 92 VVNTLLNMYVKFNLLEEAEDLFDEMP-ERNVVSWTTMISA 130
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/595 (40%), Positives = 362/595 (60%), Gaps = 32/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHL 64
Y+++ AC G + QLH +I D+ V L++MYAK G +DD+R +
Sbjct: 54 YSSVLSACTELGLLALGKQLHSRVIR--LGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 111
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLLQ-YFFPNEFSLASVLISC----D 118
F++MP+ NV+SWTA+I+ YAQ G + E LFC ++ + PN FS +SVL +C D
Sbjct: 112 FEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 171
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
G+ V++ A+K + + V N+LI+MY++S ++A K F+ + +N++S+N+++
Sbjct: 172 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 231
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ AK EEA LF ++ G+ TF+ +L A +
Sbjct: 232 Y-------------AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 278
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + K G++ + I NALI Y+RCG+I + QVF++M +++SW S++ +A HG
Sbjct: 279 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 338
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A AL++F M +P+ T+V++LSACSH G++ EG K F+SM + HG+VP+++HYA
Sbjct: 339 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 398
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLLGR G ++EA + I MP+ D+++W LLG+CR HG T L AA + + EP
Sbjct: 399 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 458
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D ++ +SN++ +G + IRK MK + K G SWIE+ENRVH F G HPQ
Sbjct: 459 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 518
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I+++L++L ++K MGY+P+T LHDIEEE KE+ L+ HSEK+A+ F +++
Sbjct: 519 AWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTS--- 575
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH +K S G+EIVVRDSNRFHH K+ +CSCNDYW
Sbjct: 576 -QSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 187/357 (52%), Gaps = 29/357 (8%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDY 119
A +FD+MP+RN+V+WT +I+ +AQ G A + LF + L + P+ F+ +SVL +C
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSKSCA----DEAWKVFENMEFRNVISW 171
L GK +H+ ++ L V V +L++MY+K A D++ KVFE M NV+SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 172 NSMIAAF-RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
++I A+ ++ + + +AIELF KM + + P+ +FS VLKAC L
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGH-------------IRPNHFSFSSVLKACGNLS 170
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
V+S K G + N+LI YAR G + +++ FD + +LVS+N+I+
Sbjct: 171 DPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVD 230
Query: 291 AYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
YA + +++EA LF ++ + + TF SLLS + G + +G ++ H L G
Sbjct: 231 GYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI-HGRLLKGGYK 289
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG-ETRLAEL 403
++ + R G I A ++ EM + + + W+ ++ KHG TR E+
Sbjct: 290 SNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEM 345
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/595 (40%), Positives = 362/595 (60%), Gaps = 32/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHL 64
Y+++ AC G + QLH +I D+ V L++MYAK G +DD+R +
Sbjct: 59 YSSVLSACTELGLLALGKQLHSRVIR--LGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 116
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLLQ-YFFPNEFSLASVLISC----D 118
F++MP+ NV+SWTA+I+ YAQ G + E LFC ++ + PN FS +SVL +C D
Sbjct: 117 FEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 176
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
G+ V++ A+K + + V N+LI+MY++S ++A K F+ + +N++S+N+++
Sbjct: 177 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 236
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ AK EEA LF ++ G+ TF+ +L A +
Sbjct: 237 Y-------------AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 283
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + K G++ + I NALI Y+RCG+I + QVF++M +++SW S++ +A HG
Sbjct: 284 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 343
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A AL++F M +P+ T+V++LSACSH G++ EG K F+SM + HG+VP+++HYA
Sbjct: 344 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 403
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLLGR G ++EA + I MP+ D+++W LLG+CR HG T L AA + + EP
Sbjct: 404 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 463
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D ++ +SN++ +G + IRK MK + K G SWIE+ENRVH F G HPQ
Sbjct: 464 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 523
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I+++L++L ++K MGY+P+T LHDIEEE KE+ L+ HSEK+A+ F +++
Sbjct: 524 AWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTS--- 580
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH +K S G+EIVVRDSNRFHH K+ +CSCNDYW
Sbjct: 581 -QSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 187/357 (52%), Gaps = 29/357 (8%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDY 119
A +FD+MP+RN+V+WT +I+ +AQ G A + LF + L + P+ F+ +SVL +C
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSKSCA----DEAWKVFENMEFRNVISW 171
L GK +H+ ++ L V V +L++MY+K A D++ KVFE M NV+SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 172 NSMIAAF-RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
++I A+ ++ + + +AIELF KM + + P+ +FS VLKAC L
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGH-------------IRPNHFSFSSVLKACGNLS 175
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
V+S K G + N+LI YAR G + +++ FD + +LVS+N+I+
Sbjct: 176 DPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVD 235
Query: 291 AYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
YA + +++EA LF ++ + + TF SLLS + G + +G ++ H L G
Sbjct: 236 GYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI-HGRLLKGGYK 294
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG-ETRLAEL 403
++ + R G I A ++ EM + + + W+ ++ KHG TR E+
Sbjct: 295 SNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEM 350
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/595 (39%), Positives = 361/595 (60%), Gaps = 32/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHL 64
Y+++ AC G + QLH +I D+ V L++MYAK G +DD+R +
Sbjct: 252 YSSVLSACTELGLLALGKQLHSRVIR--LGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 309
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLLQ-YFFPNEFSLASVLISC----D 118
F++MP+ NV+SWTA+I+ Y Q G + E LFC ++ + PN FS +SVL +C D
Sbjct: 310 FEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 369
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
G+ V++ A+K + + V N+LI+MY++S ++A K F+ + +N++S+N+++
Sbjct: 370 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 429
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ AK EEA LF ++ G+ TF+ +L A +
Sbjct: 430 Y-------------AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 476
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + K G++ + I NALI Y+RCG+I + QVF++M +++SW S++ +A HG
Sbjct: 477 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 536
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A AL++F M +P+ T+V++LSACSH G++ EG K F+SM + HG+VP+++HYA
Sbjct: 537 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 596
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLLGR G ++EA + I MP+ D+++W LLG+CR HG T L AA + + EP
Sbjct: 597 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 656
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D ++ +SN++ +G + IRK MK + K G SWIE+ENRVH F G HPQ
Sbjct: 657 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 716
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I+++L++L ++K MGY+P+T LHDIEEE KE+ L+ HSEK+A+ F +++
Sbjct: 717 AWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTS--- 773
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH +K S G+EIVVRDSNRFHH K+ +CSCNDYW
Sbjct: 774 -QSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 198/384 (51%), Gaps = 40/384 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L +C N + +H ++ + D V N LI++Y+K G + AR +F+
Sbjct: 47 YSILLKSCIRFRNFQLGKLVHRKLMQS--GLELDSVVLNTLISLYSKCGDTETARLIFEG 104
Query: 68 MP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH---- 121
M KR++VSW+A++S +A + + F +L+ F+PNE+ A+V+ +C +
Sbjct: 105 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 164
Query: 122 GKLVHALALKFS-LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G++++ +K L+A V V LI+M+ K D A+KVF+ M RN+++W MI F
Sbjct: 165 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 224
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A++ +A+ LF ++ G PD T+S VL AC L +
Sbjct: 225 -------------AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 271
Query: 239 HSLIAKYGFEDDTVIANALIHAYARC---GSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
HS + + G D + +L+ YA+C GS+ S++VF++M H+++SW +I+ AY
Sbjct: 272 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQS 331
Query: 296 GQA-KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G+ KEA++LF M +++P+ +F S+L AC + G +V+ ++ V +
Sbjct: 332 GECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLGIA 386
Query: 352 HYAC----MVDLLGRVGRILEAEK 371
C ++ + R GR+ +A K
Sbjct: 387 SVNCVGNSLISMYARSGRMEDARK 410
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+ ++ PD T+SI+LK+C + VH + + G E D+V+ N LI Y++CG
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 267 ISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
++ +F+ M DLVSW++++ +A + +A+ F +M P+ F +++
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-MVDLLGR-VGRILEAEKLIREMPMEP 380
ACS+A G ++ + + G + C ++D+ + G + A K+ +MP E
Sbjct: 155 ACSNANYAWVG-EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP-ER 212
Query: 381 DSVIWSVLLGSCRKHGETRLAELAATK 407
+ V W++++ TR A+L +
Sbjct: 213 NLVTWTLMI--------TRFAQLGCAR 231
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/595 (39%), Positives = 361/595 (60%), Gaps = 32/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHL 64
Y+++ AC G + QLH +I D+ V L++MYAK G +DD+R +
Sbjct: 234 YSSVLSACTELGLLALGKQLHSRVIR--LGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 291
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLLQ-YFFPNEFSLASVLISC----D 118
F++MP+ NV+SWTA+I+ Y Q G + E LFC ++ + PN FS +SVL +C D
Sbjct: 292 FEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 351
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
G+ V++ A+K + + V N+LI+MY++S ++A K F+ + +N++S+N+++
Sbjct: 352 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 411
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ AK EEA LF ++ G+ TF+ +L A +
Sbjct: 412 Y-------------AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 458
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + K G++ + I NALI Y+RCG+I + QVF++M +++SW S++ +A HG
Sbjct: 459 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 518
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A AL++F M +P+ T+V++LSACSH G++ EG K F+SM + HG+VP+++HYA
Sbjct: 519 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 578
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLLGR G ++EA + I MP+ D+++W LLG+CR HG T L AA + + EP
Sbjct: 579 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 638
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D ++ +SN++ +G + IRK MK + K G SWIE+ENRVH F G HPQ
Sbjct: 639 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 698
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I+++L++L ++K MGY+P+T LHDIEEE KE+ L+ HSEK+A+ F +++
Sbjct: 699 AWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTS--- 755
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH +K S G+EIVVRDSNRFHH K+ +CSCNDYW
Sbjct: 756 -QSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 198/384 (51%), Gaps = 40/384 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L +C N + +H ++ + D V N LI++Y+K G + AR +F+
Sbjct: 29 YSILLKSCIRFRNFQLGKLVHRKLMQS--GLELDSVVLNTLISLYSKCGDTETARLIFEG 86
Query: 68 MP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH---- 121
M KR++VSW+A++S +A + + F +L+ F+PNE+ A+V+ +C +
Sbjct: 87 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 146
Query: 122 GKLVHALALKFS-LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G++++ +K L+A V V LI+M+ K D A+KVF+ M RN+++W MI F
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A++ +A+ LF ++ G PD T+S VL AC L +
Sbjct: 207 -------------AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 253
Query: 239 HSLIAKYGFEDDTVIANALIHAYARC---GSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
HS + + G D + +L+ YA+C GS+ S++VF++M H+++SW +I+ AY
Sbjct: 254 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQS 313
Query: 296 GQA-KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G+ KEA++LF M +++P+ +F S+L AC + G +V+ ++ V +
Sbjct: 314 GECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLGIA 368
Query: 352 HYAC----MVDLLGRVGRILEAEK 371
C ++ + R GR+ +A K
Sbjct: 369 SVNCVGNSLISMYARSGRMEDARK 392
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+ ++ PD T+SI+LK+C + VH + + G E D+V+ N LI Y++CG
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 267 ISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
++ +F+ M DLVSW++++ +A + +A+ F +M P+ F +++
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR-VGRILEAEKLIREMPMEPD 381
ACS+A G ++ +++ + + ++D+ + G + A K+ +MP E +
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP-ERN 195
Query: 382 SVIWSVLLGSCRKHGETRLAELAATK 407
V W++++ TR A+L +
Sbjct: 196 LVTWTLMI--------TRFAQLGCAR 213
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/599 (40%), Positives = 358/599 (59%), Gaps = 30/599 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
FL + + + ACA +++ +++H ++ D+FV L+ +YAK GYL+D
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKG--GFDCDVFVKTSLVCLYAKCGYLED 165
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC-- 117
A +FD++P +NVVSWTA+ISGY G E +F LL+ P+ F++ VL +C
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNS 173
D G+ +H ++ + +V+V +L++MY+K C ++A VF+ M ++++SW +
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAK-CGNMEKARSVFDGMPEKDIVSWGA 284
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI + L +AI+LF Q+QRE + PD T VL ACA L
Sbjct: 285 MIQGYALNGLPKEAIDLFL-------------QMQRENVKPDCYTVVGVLSACARLGALE 331
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
V L+ + F + V+ ALI YA+CGS+S + +VF M D V WN+I+ A
Sbjct: 332 LGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLA 391
Query: 294 LHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
++G K + LF + ++PD TF+ LL C+HAGLV EG + F+SM + P +
Sbjct: 392 MNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSI 451
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HY CMVDLLGR G + EA +LIR MPME ++++W LLG+CR H +T+LAELA +L +
Sbjct: 452 EHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE 511
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP +S +V +SNIY + +++A +R M R++K PG SWIE++ VHEF G K
Sbjct: 512 LEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDK 571
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP E I+ KL+EL ++K GYVP T L DIEEE KE L HSEKLA+ F +++
Sbjct: 572 YHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISA 631
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+VIR++KN+R+C DCH +KL S + G+EI VRD+NRFH F++ CSCNDYW
Sbjct: 632 ----TPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 18/234 (7%)
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F ++ N+ WN+MI + AIE + M++E G P+ T
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSE-------------GFLPNNFT 114
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F VLKACA L+ + +H+L+ K GF+ D + +L+ YA+CG + + +VFD +
Sbjct: 115 FPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIP 174
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNK 335
++VSW +I+ Y G+ +EA+ +F MN+ PDS T V +LSAC+ G + G
Sbjct: 175 DKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEW 234
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ H + G+V + +VD+ + G + +A + MP E D V W ++
Sbjct: 235 I-HKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP-EKDIVSWGAMI 286
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/593 (39%), Positives = 358/593 (60%), Gaps = 32/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L +AC + ++H ++ + D+ V N LI+MYA+ G + DAR LF++
Sbjct: 449 YVILLNACVNPTALHWGREIHSRVVKD--GFMFDISVQNALISMYARCGSIKDARLLFNK 506
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC------DYL 120
M +++++SWTA+I G A+ G E +F + Q PN + S+L +C D+
Sbjct: 507 MVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDW- 565
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H ++ L +VAN L+NMYS +A +VF+ M R+++++N+MI +
Sbjct: 566 -GRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYA 624
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A L +EAL LF +LQ EG+ PD T+ +L ACA + A +H
Sbjct: 625 AHNLG-------------KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIH 671
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
SL+ K G+ DT + NAL+ YA+CGS S + VFDKM +++SWN+I+ A HG+ +
Sbjct: 672 SLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQ 731
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+ LQLF M ++PD TFVSLLSACSHAGL++EG + F SM + G+ P ++HY CM
Sbjct: 732 DVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCM 791
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G++ E E LI+ MP + ++ IW LLG+CR HG +AE AA +L+P ++
Sbjct: 792 VDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNA 851
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +S++Y +G ++ A +RK M+ V K PG SWIE+ +++H F + + HP+ E
Sbjct: 852 AVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESE 911
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ +L++L +K GYVP+T +HD++E KE + HHSE+LA+ + +++
Sbjct: 912 KIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLIST----LP 967
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH K + ++ +EIV RD NRFHHFKD +CSC DYW
Sbjct: 968 GTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 213/409 (52%), Gaps = 27/409 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V N ++NMYAK G + +AR +FD+M ++VVSWT +I GYA G++E F +F +
Sbjct: 278 DVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQ 337
Query: 101 QY-FFPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
Q PN + +VL + GK VH+ L ++ + V AL+ MY+K +
Sbjct: 338 QEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYK 397
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ +VFE + R++I+WN+MI A+ N EEA ++ Q+QREGM P
Sbjct: 398 DCRQVFEKLVNRDLIAWNTMIGGL-------------AEGGNWEEASEIYHQMQREGMMP 444
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T+ I+L AC +HS + K GF D + NALI YARCGSI ++ +F
Sbjct: 445 NKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLF 504
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+KM D++SW +++ A G EAL +F +M ++P+ T+ S+L+ACS +
Sbjct: 505 NKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G ++ ++E G+ +V++ G + +A ++ M + D V ++ ++G
Sbjct: 565 WGRRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKDARQVFDRMT-QRDIVAYNAMIGG 622
Query: 392 CRKH--GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
H G+ L + + L+P D + ++ M N SGS A+ I
Sbjct: 623 YAAHNLGKEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAKEI 670
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 202/401 (50%), Gaps = 30/401 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + C ++ ++HEH+I + D + N LINMY + G +++AR ++++
Sbjct: 144 YMKMLKRCIEVKDLVAGREVHEHIIQHCT--VLDQYTVNALINMYIQCGSIEEARQVWNK 201
Query: 68 M--PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH--- 121
+ +R V SW A++ GY Q+G EE +L + Q+ + +L SC
Sbjct: 202 LNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALE 261
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G+ +H A+K L V VAN ++NMY+K C EA +VF+ ME ++V+SW +I +
Sbjct: 262 CGREIHVEAMKARLLFDVNVANCILNMYAK-CGSIHEAREVFDKMETKSVVSWTIIIGGY 320
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C A E+F KM Q+EG+ P+ T+ VL A +G + V
Sbjct: 321 ADCGHSEIAFEIFQKM-------------QQEGVVPNRITYINVLNAFSGPAALKWGKTV 367
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
HS I G E D + AL+ YA+CGS +QVF+K+ DL++WN+++ A G
Sbjct: 368 HSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNW 427
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EA +++ M + P+ T+V LL+AC + + G ++ HS + G + +
Sbjct: 428 EEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREI-HSRVVKDGFMFDISVQNA 486
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ + R G I +A L +M + D + W+ ++G K G
Sbjct: 487 LISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGGLAKSG 526
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 121/238 (50%), Gaps = 9/238 (3%)
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+A KL + + + ++ A+ + + LQ++G + C + +LK C + V
Sbjct: 104 KANKLHSHTYKDERTITGKDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREV 163
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV--SWNSILKAYALHG 296
H I ++ D NALI+ Y +CGSI ++QV++K+ + + SWN+++ Y +G
Sbjct: 164 HEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYG 223
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+EAL+L M + AT + LLS+C ++ G ++ ++ ++ ++
Sbjct: 224 YIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR-LLFDVNVA 282
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRKHGETRLAELAATKLKQ 410
C++++ + G I EA ++ + ME SV+ W++++G G + +A K++Q
Sbjct: 283 NCILNMYAKCGSIHEAREVFDK--METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQ 338
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/591 (39%), Positives = 355/591 (60%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L +AC + ++H + D+ V N LI+MY++ G + DAR +FD+
Sbjct: 331 YVILLNACVNSAALHWGKEIHSRVAK--AGFTSDIGVQNALISMYSRCGSIKDARLVFDK 388
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
M +++V+SWTA+I G A+ G E ++ + Q PN + S+L +C G
Sbjct: 389 MVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWG 448
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H ++ L +V N L+NMYS +A +VF+ M R+++++N+MI + A
Sbjct: 449 RRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAH 508
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L +EAL LF +LQ EG+ PD T+ +L ACA + A +H+L
Sbjct: 509 NLG-------------KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTL 555
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GF DT + NAL+ YA+CGS S + VF+KMT +++SWN+I+ A HG+ ++A
Sbjct: 556 VRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDA 615
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQLF M V+PD TFVSLLSACSHAGL++EG + F SM ++ ++P ++HY CMVD
Sbjct: 616 LQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVD 675
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G++ EAE LI+ MP + ++ IW LLG+CR HG +AE AA +L+ +++
Sbjct: 676 LLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVV 735
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +S++Y +G ++ A +RK M+ V K PG SWI++ +++H F + + HPQ E I
Sbjct: 736 YVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKI 795
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +L+ L +K GYVP+T +HD++E KE + HHSE+LA+ + +++ R
Sbjct: 796 YAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTR--- 852
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I I KN+R+C DCH K S ++ +EI+ RD NRFHHFKD +CSC DYW
Sbjct: 853 -IHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 216/415 (52%), Gaps = 31/415 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V N ++NMYAK G +++AR +FD+M K++VVSWT I GYA G +E F +F +
Sbjct: 160 DVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKME 219
Query: 101 QY-FFPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
Q PN + SVL + GK VH+ L ++ V AL+ MY+K +
Sbjct: 220 QEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYK 279
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ +VFE + R++I+WN+MI A+ EEA ++ Q+QREG+ P
Sbjct: 280 DCRQVFEKLVNRDLIAWNTMIGGL-------------AEGGYWEEASEVYNQMQREGVMP 326
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T+ I+L AC +HS +AK GF D + NALI Y+RCGSI ++ VF
Sbjct: 327 NKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVF 386
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
DKM D++SW +++ A G EAL ++ M V+P+ T+ S+L+ACS ++
Sbjct: 387 DKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALE 446
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G ++ ++E G+ +V++ G + +A ++ M ++ D V ++ ++G
Sbjct: 447 WGRRIHQQVVEA-GLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGG 504
Query: 392 CRKH--GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR----LIRK 440
H G+ L + + L+P D + ++ M N SGS AR L+RK
Sbjct: 505 YAAHNLGKEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAREIHTLVRK 558
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 206/400 (51%), Gaps = 28/400 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + C ++ Q+H+H+I + D + N LINMY + G +++AR ++ +
Sbjct: 26 YMKMLKRCIEVKDLVAGRQVHQHIIQH--RTVPDQYTVNALINMYIQCGSIEEARQVWKK 83
Query: 68 MP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH--- 121
+ +R V SW A++ GY Q+G E+ +L + Q+ P+ ++ S L SC
Sbjct: 84 LSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALE 143
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H A++ L V VAN ++NMY+K +EA +VF+ ME ++V+SW I +
Sbjct: 144 WGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYA 203
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C A E+F KM ++EG+ P+ T+ VL A + + AVH
Sbjct: 204 DCGRSETAFEIFQKM-------------EQEGVVPNRITYISVLNAFSSPAALKWGKAVH 250
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S I G E DT + AL+ YA+CGS +QVF+K+ DL++WN+++ A G +
Sbjct: 251 SRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWE 310
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA ++++ M V P+ T+V LL+AC ++ + G ++ HS + G + +
Sbjct: 311 EASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEI-HSRVAKAGFTSDIGVQNAL 369
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + R G I +A +L+ + + D + W+ ++G K G
Sbjct: 370 ISMYSRCGSIKDA-RLVFDKMVRKDVISWTAMIGGLAKSG 408
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/579 (39%), Positives = 349/579 (60%), Gaps = 29/579 (5%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ Q+H H++ N QDL + N L+ YA+ +DDA LFD + R+ +W+ +
Sbjct: 15 NVFHIRQVHAHVVAN--GTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVM 72
Query: 80 ISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSL 134
+ G+A+ G+ C+ F LL+ P+ ++L V+ +C D G+++H + LK L
Sbjct: 73 VGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGL 132
Query: 135 DAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+ +V +L++MY+K ++A ++FE M +++++W MI A+ C
Sbjct: 133 LSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC------------ 180
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
N E+L LF +++ EG+ PD V+ ACA L A + I + GF D ++
Sbjct: 181 --NAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVIL 238
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
A+I YA+CGS+ +++VFD+M +++SW++++ AY HG+ K+A+ LF M +
Sbjct: 239 GTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAI 298
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
P+ TFVSLL ACSHAGL++EG + F+SM E H V P + HY CMVDLLGR GR+ EA
Sbjct: 299 LPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEAL 358
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+LI M +E D +WS LLG+CR H + LAE AA L +L+P + +V +SNIY +G
Sbjct: 359 RLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAG 418
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ K R M +++K PG +WIE++N+ ++F+ G + HPQ + I++ L LI +L+
Sbjct: 419 KWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLE 478
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GYVP+T L D+EEE K+E LY HSEKLA+ F ++ E IRI KN+R+C
Sbjct: 479 MAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIA----IPEGEPIRISKNLRVCG 534
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH F K+ S ++ + I+VRD+NRFHHF D CSC DYW
Sbjct: 535 DCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/593 (40%), Positives = 361/593 (60%), Gaps = 29/593 (4%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ Y TL C + + Q +H H+I + DL + N L+NMYAK G L++AR +F
Sbjct: 52 RFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFR--HDLVMNNTLLNMYAKCGSLEEARKVF 109
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH--- 121
D+MP+R+ V+WT LISGY+QH + LF +L++ F PNEF+L+SV+ +
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G +H +K D++V+V +AL+++Y++ D+A VF+ +E RN +SWN++IA
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH- 228
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+ E+AL LF+ + REG P +++ + AC+ VH
Sbjct: 229 ------------ARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVH 276
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K G + N L+ YA+ GSI ++++FD++ D+VSWNS+L AYA HG
Sbjct: 277 AYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGN 336
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ F M ++P+ +F+S+L+ACSH+GL+ EG ++ +++ G+V + HY +
Sbjct: 337 EAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVLEAWHYVTI 395
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + A + I EMP+EP + IW LL +CR H T L AA + +L+P D
Sbjct: 396 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 455
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V + NIY G +N A +RK+MK S V+K P SW+EIEN +H F + +RHPQRE
Sbjct: 456 GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQRE 515
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I +K EE++ ++K +GYVP+TS + ++++ +E L +HSEK+AL FA++N
Sbjct: 516 EIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPP---- 571
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I I KNIR+C DCH+ +KLAS +G+EI+VRD+NRFHHFKD CSC DYW
Sbjct: 572 GSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 131/293 (44%), Gaps = 15/293 (5%)
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
++E F L+ + D ++ +LK C VH + + F D V+ N
Sbjct: 31 DDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNN 90
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
L++ YA+CGS+ +++VFDKM D V+W +++ Y+ H + +AL LF+ M P
Sbjct: 91 TLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSP 150
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ T S++ A + G+++ H G + + ++DL R G +++ +L
Sbjct: 151 NEFTLSSVIKAAAAERRGCCGHQL-HGFCVKCGFDSNVHVGSALLDLYTRYG-LMDDAQL 208
Query: 373 IREMPMEPDSVIWSVLL-GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
+ + + V W+ L+ G R+ G + EL L++ + + +G
Sbjct: 209 VFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGF 268
Query: 432 FNKARLIRKEM--KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
+ + + M G ++ + G + +++ +A G H R+ IF +L
Sbjct: 269 LEQGKWVHAYMIKSGEKLVAFAGNTLLDM------YAKSGSIHDARK-IFDRL 314
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/593 (39%), Positives = 362/593 (61%), Gaps = 29/593 (4%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ Y TL C + + Q +H H++ + D+ + N L+NMYAK G L++AR +F
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIFR--HDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH--- 121
++MP+R+ V+WT LISGY+QH + F +L++ + PNEF+L+SV+ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G +H +K D++V+V +AL+++Y++ D+A VF+ +E RN +SWN++IA
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH- 237
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+ E+AL LF+ + R+G P +++ + AC+ VH
Sbjct: 238 ------------ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVH 285
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K G + N L+ YA+ GSI ++++FD++ D+VSWNS+L AYA HG K
Sbjct: 286 AYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGK 345
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ F M ++P+ +F+S+L+ACSH+GL+ EG ++ +++ G+VP+ HY +
Sbjct: 346 EAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTV 404
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + A + I EMP+EP + IW LL +CR H T L AA + +L+P D
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 464
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V + NIY G +N A +RK+MK S V+K P SW+EIEN +H F + +RHPQRE
Sbjct: 465 GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQRE 524
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I +K EE++ ++K +GYVP+TS + ++++ +E L +HSEK+AL FA++N
Sbjct: 525 EIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPP---- 580
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I I KNIR+C DCH +KLAS ++G+EI+VRD+NRFHHFKD CSC DYW
Sbjct: 581 GSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/594 (39%), Positives = 366/594 (61%), Gaps = 32/594 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L + C +++ ++H HMI P ++++ LI +Y K L ARH+FDE
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPP--VYLSTRLIILYTKCECLGCARHVFDE 70
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD----YLHG 122
M +RNVVSWTA+ISGY+Q G A E LF +L+ PNEF+ A+VL SC + G
Sbjct: 71 MRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELG 130
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H+ K + + H++V ++L++MY+K+ EA VFE + R+V+S ++I+ +
Sbjct: 131 RQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGY--- 187
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A++ +EEAL LF +LQREGM+ ++ T++ +L A +GL H VHS
Sbjct: 188 ----------AQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSH 237
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + V+ N+LI Y++CG+++ ++++F+ M ++SWN++L Y+ HG+ E
Sbjct: 238 VLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEV 297
Query: 302 LQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG--VVPQLDHYAC 355
++LF M V+PDS TF+++LS CSH GL +G ++F M+ N G + ++HY C
Sbjct: 298 VKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMM-NGGDEIEAGIEHYGC 356
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
++DLLGR GR+ EA +LI++MP EP + IW LLG+CR H T + E +L ++EP +
Sbjct: 357 VIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPEN 416
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +V +SN+Y +G + R +R+ M V K PG SWIE++ +H F + + HP+R
Sbjct: 417 AGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRR 476
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
E +F K+ EL+ + K GYVP+ S L+D++EE KE+ L HSEKLAL F +++
Sbjct: 477 EEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTS---- 532
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E +R++KN+RICVDCHNF K S + G+++ +RD NRFHH ICSC DYW
Sbjct: 533 EGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/597 (39%), Positives = 362/597 (60%), Gaps = 38/597 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y T+ + C I++ ++H HMI P+ +++ LI +Y K L DAR +F
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYLPS----VYLRTRLIVLYNKCDCLGDAREMF 148
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYL 120
DEMP++NVVSWTA+IS Y+Q G A E LF +L+ PN F+ A++L SC +
Sbjct: 149 DEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFE 208
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKS---CADEAWKVFENMEFRNVISWNSMIAA 177
G+ +H++A+K + ++H++V ++L++MY+KS C +A VF + R+V++ ++I+
Sbjct: 209 TGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRIC--DAHGVFHCLPERDVVACTAIISG 266
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ A+M +EEAL LFRQLQ EGM + T++ VL A +GL H
Sbjct: 267 Y-------------AQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 313
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VHS + + G V+ N+LI Y++CG++ ++++FD M +SWN++L Y+ HG
Sbjct: 314 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 373
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH-GVVPQLDH 352
A+E L+LF M V+PDS T++++LS CSH L G ++F++M+ G+ P + H
Sbjct: 374 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 433
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y C+VDLLGR GR+ EA I++MP P + IW LLGSCR H + + + KL +LE
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELE 493
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
P ++ +V +SN+Y +G + R IR M+ V K PG SW+E++ VH F + H
Sbjct: 494 PENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTH 553
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+RE + KK++EL + K GYVP+ S L+D++EE KE+ L HSEKLAL F ++
Sbjct: 554 PRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIAT-- 611
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E + IR++KN+RICVDCH+F K S L + +++RD NRFH+ +CSC DYW
Sbjct: 612 --PEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/597 (39%), Positives = 355/597 (59%), Gaps = 34/597 (5%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARH 63
Q Y T+ + C I++ ++H HMI P +++ LI Y K L DARH
Sbjct: 59 QDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPC----VYLRTRLIVFYVKCDSLRDARH 114
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----D 118
+FD MP+RNVVSWTA+IS Y+Q G A + LF +L+ PNEF+ A+VL SC
Sbjct: 115 VFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSG 174
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAA 177
++ G+ +H+ +K + +AHVYV ++L++MY+K EA +F+ + R+V+S ++I+
Sbjct: 175 FVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISG 234
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ A++ +EEAL LFR+LQREGM ++ T++ VL A +GL H
Sbjct: 235 Y-------------AQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQ 281
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH+ + + V+ N+LI Y++CG+++ ++++FD + ++SWN++L Y+ HG+
Sbjct: 282 VHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGE 341
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH-GVVPQLDH 352
+E L+LF+ M V+PDS T +++LS CSH GL +G +F+ M V P H
Sbjct: 342 GREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKH 401
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y C+VD+LGR GR+ A + +++MP EP + IW LLG+C H + E +L Q+E
Sbjct: 402 YGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIE 461
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
P ++ +V +SN+Y +G + R +R M V K PG SWIE++ +H F + H
Sbjct: 462 PENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSH 521
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+RE + K++EL + K GYVP+ S LHD++EE KE+ L HSEKLAL F ++
Sbjct: 522 PRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATP- 580
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E IR++KN+RICVDCHNF K S + G+E+ +RD NRFH CSC DYW
Sbjct: 581 ---ESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 5/182 (2%)
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ ++ ++ VL C R VH+ + K + + LI Y +C S+ +
Sbjct: 53 GLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDA 112
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+ VFD M ++VSW +++ AY+ G A +AL LF M +P+ TF ++L++C +
Sbjct: 113 RHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGS 172
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G ++ HS + + + ++D+ + G+I EA + + +P E D V +
Sbjct: 173 SGFVLGRQI-HSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP-ERDVVSCTA 230
Query: 388 LL 389
++
Sbjct: 231 II 232
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/588 (41%), Positives = 358/588 (60%), Gaps = 27/588 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L C HG +++ ++H H+ +N P+ F+TN LINMY KF L++A+ LFD+
Sbjct: 288 YSELIKCCLAHGAVREGKRVHRHIFSN-GYHPKT-FLTNILINMYVKFNLLEEAQVLFDK 345
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG-KLV 125
MP+RNVVSWT +IS Y+ + RL + + PN F+ +SVL +C+ L+ K +
Sbjct: 346 MPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQL 405
Query: 126 HALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H+ +K L++ V+V +ALI++YSK EA KVF M + + WNS+IAAF
Sbjct: 406 HSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAF------ 459
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
A+ + +EAL L++ ++R G D T + VL+AC L H + K
Sbjct: 460 -------AQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK 512
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
F+ D ++ NAL+ Y +CGS+ +K +F++M D++SW++++ A +G + EAL L
Sbjct: 513 --FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNL 570
Query: 305 FSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F +M VQ P+ T + +L ACSHAGLV EG F SM +G+ P +HY CM+DLLG
Sbjct: 571 FESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLG 630
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R ++ + KLI EM EPD V W LL +CR LA AA ++ +L+P D+ +V
Sbjct: 631 RAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVL 690
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY +S +N +R+ MK +RK PG SWIE+ ++H F G K HPQ + I ++
Sbjct: 691 LSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQ 750
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L + I +L G GYVP+T+ L D+E E +E+ L +HSEKLA+VF IM S +E++ IR
Sbjct: 751 LNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIM---SFPKEKT-IR 806
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I KN++IC DCH F KL ++L + IV+RD R+HHF+D +CSC DYW
Sbjct: 807 IWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
++ A+ + ++R G+ D T+S ++K C R VH I G+ T +
Sbjct: 264 RDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLT 323
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
N LI+ Y + + ++ +FDKM ++VSW +++ AY+ A++L + M V
Sbjct: 324 NILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVM 383
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P+ TF S+L AC +++ HS + G+ + + ++D+ ++G +LEA K
Sbjct: 384 PNMFTFSSVLRACERLYDLKQ----LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALK 439
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGE 397
+ REM M DSV+W+ ++ + +H +
Sbjct: 440 VFREM-MTGDSVVWNSIIAAFAQHSD 464
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/589 (39%), Positives = 349/589 (59%), Gaps = 28/589 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ CA ++Q Q+H + I + D+ V N L+NMYAK G ++ A LF+ MP
Sbjct: 226 SVMPVCAHLLALEQGKQIHCYAIRS--GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP 283
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKL 124
R+V SW A+I GY+ + E F + ++ PN ++ SVL +C +L G+
Sbjct: 284 IRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQ 343
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H A++ +++ V NAL+NMY+K + A+K+FE M +NV++WN++I+ +
Sbjct: 344 IHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGY----- 398
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
++ + EAL LF ++Q +G+ PD VL ACA + +H
Sbjct: 399 --------SQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTI 450
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ GFE + V+ L+ YA+CG+++ ++++F++M D+VSW +++ AY +HG ++AL
Sbjct: 451 RSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALA 510
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LFS M + D F ++L+ACSHAGLV +G + F M ++G+ P+L+HYAC+VDLL
Sbjct: 511 LFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLL 570
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR G + EA +I+ M +EPD+ +W LLG+CR H L E AA L +L+P ++ +V
Sbjct: 571 GRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYV 630
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SNIY + + +RK MK V+K PG S + + V F G + HPQ E I+
Sbjct: 631 LLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYA 690
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
LE L Q++ GYVP T+LAL D+EEE KE L HSEKLA+ F I+N I
Sbjct: 691 MLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIP----I 746
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RIMKN+R+C DCHN K S ++G+EI+VRD+NRFHH K+ CSC DYW
Sbjct: 747 RIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/430 (33%), Positives = 226/430 (52%), Gaps = 32/430 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ ++ AC +++ ++HE +I D+ V L +MY K G L++AR +FD
Sbjct: 122 VFLSVIKACGSQSDLQAGRKVHEDIIAR--GFESDVIVGTALASMYTKCGSLENARQVFD 179
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----H 121
MPKR+VVSW A+I+GY+Q+G E LF + + PN +L SV+ C +L
Sbjct: 180 RMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQ 239
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK +H A++ +++ V V N L+NMY+K + A K+FE M R+V SWN++I +
Sbjct: 240 GKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGY-- 297
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L +Q EAL F ++Q G+ P+ T VL ACA L +H
Sbjct: 298 -SLNSQ----------HHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG 346
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ GFE + V+ NAL++ YA+CG+++ + ++F++M ++V+WN+I+ Y+ HG E
Sbjct: 347 YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHE 406
Query: 301 ALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL LF M Q PDS VS+L AC+H +++G ++ H G + +V
Sbjct: 407 ALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQI-HGYTIRSGFESNVVVGTGLV 465
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWS--VLLGSCRKHGETRLAELAATKLKQLEPGD 415
D+ + G + A+KL MP E D V W+ +L HGE LA + K E G
Sbjct: 466 DIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGIHGHGEDALALFS----KMQETGT 520
Query: 416 SLGFVQMSNI 425
L + + I
Sbjct: 521 KLDHIAFTAI 530
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 187/368 (50%), Gaps = 35/368 (9%)
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKL 124
+ N V W I GY ++G + RL+ + + P++ SV+ +C D G+
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKL 183
VH + ++ V V AL +MY+K + + A +VF+ M R+V+SWN++IA +
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGY----- 196
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
++ EAL LF ++Q G+ P+ T V+ CA L+ +H
Sbjct: 197 --------SQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAI 248
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G E D ++ N L++ YA+CG+++ + ++F++M D+ SWN+I+ Y+L+ Q EAL
Sbjct: 249 RSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALA 308
Query: 304 LFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKV----FHSMLENHGVVPQLDHYACM 356
F+ M V +P+S T VS+L AC+H +++G ++ S E++ VV +
Sbjct: 309 FFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN-----AL 363
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR--LAELAATKLKQLEPG 414
V++ + G + A KL MP + + V W+ ++ +HG LA + + ++P
Sbjct: 364 VNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKP- 421
Query: 415 DSLGFVQM 422
DS V +
Sbjct: 422 DSFAIVSV 429
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/591 (39%), Positives = 349/591 (59%), Gaps = 29/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y AC + + Q+H HM+ P +++ LI +Y + G LDDAR++ D
Sbjct: 44 YDAAITACVERQALGEGRQVHAHMVKARYRPP--VYLATRLIILYVRCGALDDARNVLDG 101
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKL-- 124
MP+RNVVSWTA+ISGY+Q G E LF +L+ NEF+LA+VL SC +H +
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCP-VHQSIQQ 160
Query: 125 ---VHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRA 180
VH+L +K + ++H++V ++L++MY KS EA KVF+ + R+ +S ++I+ +
Sbjct: 161 VEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGY-- 218
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A++ ++EAL LFRQL GM ++ TF+ +L + +GL + + VH
Sbjct: 219 -----------AQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHG 267
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
LI + V+ N+LI Y++CG + S++VFD M +SWN++L Y HG +E
Sbjct: 268 LILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQE 327
Query: 301 ALQLFSNMN--VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+QLF M V+PDS T +++LS CSH GLV EG +F +++ V + HY C++D
Sbjct: 328 VVQLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVID 387
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G++ +A LI MP EP IW LLG+CR H + E+ A KL +EPG++
Sbjct: 388 LLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGN 447
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SNIY +G + +RK M + V K P SWI ++ +H F S + HP+++ I
Sbjct: 448 YVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDI 507
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
K++E+ +K G+VP+ S LHD+++E KE L HSEKLA+ F +MN
Sbjct: 508 NAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNT----PPGL 563
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I++MKN+RICVDCHNF K S + G+EI +RD NRFH KD C+C DYW
Sbjct: 564 TIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/597 (39%), Positives = 361/597 (60%), Gaps = 38/597 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y ++ + C I++ ++H HMI P+ +++ LI +Y K L DAR +F
Sbjct: 65 YDSILNECVSQRAIREGQRVHTHMIKTCYLPS----VYLRTRLIVLYNKCDCLGDARGMF 120
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYL 120
DEMP+RNVVSWTA+IS Y+Q G A E LF +L+ PN F+ A++L SC +
Sbjct: 121 DEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFE 180
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKS---CADEAWKVFENMEFRNVISWNSMIAA 177
G+ +H++A+K + ++H++V ++L++MY+KS C +A VF + R+V++ ++I+
Sbjct: 181 TGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRIC--DAHGVFHCLPERDVVACTAIISG 238
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ A+M +EEAL LFRQLQ EGM + T++ VL A +GL H
Sbjct: 239 Y-------------AQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 285
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VHS + + G V+ N+LI Y++CG++ ++++FD M +SWN++L Y+ HG
Sbjct: 286 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 345
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH-GVVPQLDH 352
A+E L+LF M V+PDS T++++LS CSH L G ++F++M+ G+ P + H
Sbjct: 346 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 405
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y C+VDLLGR GR+ EA I++MP P + IW LLGSCR H + + + KL +LE
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELE 465
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
P ++ +V +SN+Y +G + R IR M+ V K PG SW+E++ VH F + H
Sbjct: 466 PENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTH 525
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+RE + K++EL + K GYVP+ S L+D++EE KE+ L HSEKLAL F ++
Sbjct: 526 PRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIAT-- 583
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E + IR++KN+RICVDCH+F K S L + +++RD NRFH+ +CSC DYW
Sbjct: 584 --PEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/589 (39%), Positives = 359/589 (60%), Gaps = 35/589 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + G + A +L + M +D+ ++I Y + G LD+AR LFDE
Sbjct: 151 WTVMLGGLLQEGRVDDARKLFDMMPE------KDVVAVTNMIGGYCEEGRLDEARALFDE 204
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVH 126
MPKRNVV+WTA++SGYA++G + +LF + + NE S ++L+ Y H G++
Sbjct: 205 MPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPER---NEVSWTAMLLG--YTHSGRMRE 259
Query: 127 ALALKFSLDAH-VYVANALINMYS-KSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A +L ++ V V N +I + D+A +VF+ M+ R+ +W++MI + E
Sbjct: 260 ASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVY-----E 314
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ EL EAL LFR++QREG+A ++ + VL C L + H VH+ + +
Sbjct: 315 RKGYEL--------EALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVR 366
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
F+ D +A+ LI Y +CG++ +KQVF++ D+V WNS++ Y+ HG +EAL +
Sbjct: 367 SEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNV 426
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F +M V PD TF+ +LSACS++G V+EG ++F +M + V P ++HYAC+VDLLG
Sbjct: 427 FHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLG 486
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R ++ EA KL+ +MPMEPD+++W LLG+CR H + LAE+A KL QLEP ++ +V
Sbjct: 487 RADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVL 546
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG-GKRHPQREAIFK 480
+SN+Y G + ++R+++K V K PG SWIE+E +VH F G K HP++ I K
Sbjct: 547 LSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMK 606
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
LE+L G L+ GY P+ S LHD++EE K L +HSEKLA+ + ++ E I
Sbjct: 607 MLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLK----VPEGMPI 662
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+MKN+R+C DCH+ +KL + + G+EI++RD+NRFHHFKD CSC DYW
Sbjct: 663 RVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 193/423 (45%), Gaps = 48/423 (11%)
Query: 35 FPNEPQDLFVT-NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F PQ V+ N LI+ + K G L +AR +FD MP RNVVSWT+++ GY ++G+ E
Sbjct: 78 FEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAE 137
Query: 94 RLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
RLF + P++ ++ +V++ G++ A L F + V A+ NM C
Sbjct: 138 RLF-----WHMPHKNVVSWTVMLGGLLQEGRVDDARKL-FDMMPEKDVV-AVTNMIGGYC 190
Query: 153 A----DEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEEEALFLFRQL 207
DEA +F+ M RNV++W +M++ + R K++ A +LF M E
Sbjct: 191 EEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDV-ARKLFEVMPERNEV------- 242
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+++ +L R AS++ + V+ N +I + G +
Sbjct: 243 ----------SWTAMLLGYTHSGRMREASSLFDAMPV----KPVVVCNEMIMGFGLNGEV 288
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATF---VSLLSAC 324
+++VF M D +W++++K Y G EAL LF M + + F +S+LS C
Sbjct: 289 DKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVC 348
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ G +V H+ L L + ++ + + G ++ A+++ P++ D V+
Sbjct: 349 VSLASLDHGKQV-HAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK-DVVM 406
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQL----EPGDSLGFVQMSNIYCLSGSFNKARLIRK 440
W+ ++ +HG L E A + P D + F+ + + SG + + +
Sbjct: 407 WNSMITGYSQHG---LGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFE 463
Query: 441 EMK 443
MK
Sbjct: 464 TMK 466
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 147/354 (41%), Gaps = 65/354 (18%)
Query: 45 TNHLINMYAKFGYLDDARHLFDE--MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+++ I YA+ G LD AR +FDE +P R V SW A+++ Y + E LF + Q
Sbjct: 25 SSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR 84
Query: 103 FFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFEN 162
N S ++ ++ N +++ EA +VF+
Sbjct: 85 ---NTVSWNGLISG----------------------HIKNGMLS--------EARRVFDT 111
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKM--KNEEEALFLFRQLQREGMAPDWCTFS 220
M RNV+SW SM+ + A+A LF M KN + L +EG D
Sbjct: 112 MPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDD----- 166
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFED---------------DTVIANALIHAYARCG 265
+ ++ E+ AV ++I Y E + V A++ YAR G
Sbjct: 167 --ARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNG 224
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS 325
+ +++++F+ M + VSW ++L Y G+ +EA LF M V+P ++
Sbjct: 225 KVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKP-VVVCNEMIMGFG 283
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
G V + +VF M E ++ M+ + R G LEA L R M E
Sbjct: 284 LNGEVDKARRVFKGMKERDN-----GTWSAMIKVYERKGYELEALGLFRRMQRE 332
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 251 TVIANALIHAYARCGSISLSKQVFDK--MTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
T ++ I YAR G + +++VFD+ + + + SWN+++ AY Q +EAL LF M
Sbjct: 22 TTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM 81
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
Q ++ ++ L+S G++ E +VF +M + + V + MV R G + E
Sbjct: 82 P-QRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVV-----SWTSMVRGYVRNGDVAE 135
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNIYC 427
AE+L MP + + V W+V+LG + G A KL + P D + M YC
Sbjct: 136 AERLFWHMPHK-NVVSWTVMLGGLLQEGRVD----DARKLFDMMPEKDVVAVTNMIGGYC 190
Query: 428 LSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
G ++AR + EM V ++W + V +A GK R+ +F+ + E
Sbjct: 191 EEGRLDEARALFDEMPKRNV-----VTWTAM---VSGYARNGKVDVARK-LFEVMPE 238
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 165/373 (44%), Gaps = 44/373 (11%)
Query: 97 CSLLQYFFPNEFSLASVLISCDYLHGKLVHALAL-KFSLDAHVYVA--NALINMYSKS-C 152
C +LQ S +S I+C +G+L HA + + H V+ NA++ Y ++
Sbjct: 12 CMMLQVRLQCTTS-SSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQ 70
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM--KNEEEALFLFRQLQRE 210
EA +FE M RN +SWN +I+ + ++A +F M +N + R R
Sbjct: 71 PREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRN 130
Query: 211 GMAPD-----W-------CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
G + W +++++L GL+ E L E D V +I
Sbjct: 131 GDVAEAERLFWHMPHKNVVSWTVML---GGLLQEGRVDDARKLFDMMP-EKDVVAVTNMI 186
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFV 318
Y G + ++ +FD+M ++V+W +++ YA +G+ A +LF M + + ++
Sbjct: 187 GGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP-ERNEVSWT 245
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREM 376
++L +H+G ++E + +F +M P C M+ G G + +A ++ + M
Sbjct: 246 AMLLGYTHSGRMREASSLFDAM-------PVKPVVVCNEMIMGFGLNGEVDKARRVFKGM 298
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNI--YCLS----- 429
E D+ WS ++ + G L L + Q E G +L F + ++ C+S
Sbjct: 299 K-ERDNGTWSAMIKVYERKG-YELEALGLFRRMQRE-GLALNFPSLISVLSVCVSLASLD 355
Query: 430 -GSFNKARLIRKE 441
G A+L+R E
Sbjct: 356 HGKQVHAQLVRSE 368
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/560 (40%), Positives = 348/560 (62%), Gaps = 27/560 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D++V N L+ MYAKFG + AR +FD M +R++ SW +ISGYA++ ++ F +F +
Sbjct: 194 SDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLM 253
Query: 100 LQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFSL-DAHVYVANALINMYSK-SC 152
+ F + +L +L +C L GK++H A++ S+ + + + N+LI MY +C
Sbjct: 254 GKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNC 313
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+A ++FE + +++ +SWNSMI + A+ + E+L LFR++ +G
Sbjct: 314 MVDARRLFERVRWKDTVSWNSMILGY-------------ARNGDAFESLRLFRRMALDGS 360
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD TF VL AC + R+ ++HS + K GF+ +T++ AL+ Y++CGS++ S++
Sbjct: 361 GPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRR 420
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD+M LVSW++++ Y LHG+ +EA+ + M +V PD+ F S+LSACSHAGL
Sbjct: 421 VFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGL 480
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V EG ++F+ M + + V P L HY+CMVDLLGR G + EA +IR M ++P S IW+ LL
Sbjct: 481 VVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALL 540
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+ R H +LAE++A K+ + P ++ +SNIY ++ +R ++ ++K
Sbjct: 541 TASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKK 600
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PG S+IE++N VH F G K H Q E I+ KL EL QLK GY P+TSL +D+EEE
Sbjct: 601 SPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEV 660
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE+ L+ HSE+LA+ FA++N G +VIRI KN+R+C DCH KL S+L G+EI++
Sbjct: 661 KEKMLWDHSERLAIAFALINTG----PGTVIRITKNLRVCGDCHTVTKLISELTGREIIM 716
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD +RFHHF CSC DYW
Sbjct: 717 RDIHRFHHFIKGFCSCGDYW 736
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 186/392 (47%), Gaps = 26/392 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
+ KQ QLH HMI+ F + ++ L YA G + A +FD + +N W +
Sbjct: 74 SFKQGQQLHAHMIS-FSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFM 132
Query: 80 ISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
I GYA +G + L+ +L + + F+ VL +C L G+ VH+ + L
Sbjct: 133 IRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGL 192
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
++ +YV N+L+ MY+K A VF+ M R++ SWN+MI+ +AK
Sbjct: 193 ESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISG-------------YAK 239
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED-DTV 252
+ A +F + + G+ D T +L ACA L + +H + + +
Sbjct: 240 NADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKF 299
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ- 311
N+LI Y C + ++++F+++ + D VSWNS++ YA +G A E+L+LF M +
Sbjct: 300 FTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDG 359
Query: 312 --PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
PD TF+++L AC ++ G + HS L G +VD+ + G + +
Sbjct: 360 SGPDQVTFIAVLGACDQIAALRYGMSI-HSYLVKKGFDANTIVGTALVDMYSKCGSLACS 418
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
++ EMP + V WS ++ HG R A
Sbjct: 419 RRVFDEMP-DKSLVSWSAMVAGYGLHGRGREA 449
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 160/365 (43%), Gaps = 55/365 (15%)
Query: 119 YLHGKLVHALALKFS-LDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMI 175
+ G+ +HA + FS L+ + Y+ L Y+ C +A +F+ + +N WN MI
Sbjct: 75 FKQGQQLHAHMISFSILENNTYLNTKLAAFYA-GCGLMSQAEVIFDGIVLKNSFLWNFMI 133
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ + L ++ L L+R++ G D T+ VLKAC L+
Sbjct: 134 RGYASNGLPMKS-------------LVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIG 180
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VHS + G E D + N+L+ YA+ G + ++ VFD+M DL SWN+++ YA +
Sbjct: 181 RRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKN 240
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN--------- 343
+ A +F M + D T + LLSAC+ V+EG + + N
Sbjct: 241 ADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFF 300
Query: 344 -HGVVPQLDHYACMVD-------------------LLG--RVGRILEAEKLIREMPME-- 379
+ ++ + CMVD +LG R G E+ +L R M ++
Sbjct: 301 TNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGS 360
Query: 380 -PDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
PD V + +LG+C + R + + +K+ +++ + ++Y GS +R
Sbjct: 361 GPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRR 420
Query: 438 IRKEM 442
+ EM
Sbjct: 421 VFDEM 425
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/595 (39%), Positives = 359/595 (60%), Gaps = 29/595 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ ++Y ++ ACA N+ A +H H+ + D F+ N LI+MY K G + DARH
Sbjct: 61 TPRVYHSIITACAQSKNLAGARAIHSHLSRS--RLAGDGFLLNSLIHMYCKCGAVSDARH 118
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG 122
+FD +P R+VVSWT LI+GYAQ+ E L +L+ F P+ F+ S L + G
Sbjct: 119 VFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGG 178
Query: 123 KLV----HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
+ + HALA+K++LD VYV +AL++MY++ D A +VF+ ++ +N +SWN++IA
Sbjct: 179 RGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAG 238
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F A+ + E L F ++QR G T+S V A A +
Sbjct: 239 F-------------ARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRW 285
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH+ + K G + +AN ++ YA+ GS+ +++VFD++ DLV+WN++L A+A +G
Sbjct: 286 VHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGL 345
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
KEA+ F + +Q + TF+S+L+ACSH GLV+EG + F M++++ V P++DHY
Sbjct: 346 GKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYF-DMMKDYNVEPEIDHYV 404
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
VDLLGR G + EA + +MPMEP + +W LLG+CR H ++ + AA + +L+P
Sbjct: 405 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPE 464
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D+ V + NIY +G ++ A +RK MK + V+K P SW+EIEN VH F + HP+
Sbjct: 465 DTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPK 524
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
E I++ EE+ ++K GYVP T L I+E+ +E +L +HSEK+AL FA++N +
Sbjct: 525 SEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPA-- 582
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRIMKNIRIC DCH+ + S++ +EIVVRD+NRFHHF + CSC DYW
Sbjct: 583 --GATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+AP + ++ ACA A A+HS +++ D + N+LIH Y +CG++S ++
Sbjct: 58 LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
VFD + D+VSW ++ YA + EAL L +M +P TF S L A G
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
G ++ H++ + + + + ++D+ R ++ A ++ + + + V W+ L
Sbjct: 178 GRGIGEQM-HALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSK-NEVSWNAL 235
Query: 389 L-GSCRK-HGETRLAELA 404
+ G RK GET L + A
Sbjct: 236 IAGFARKGDGETTLMKFA 253
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/593 (38%), Positives = 354/593 (59%), Gaps = 36/593 (6%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQ---DLFVTNHLINMYAKFGYLDDARHLFD 66
T+ ACA G + +A +I+++ + D+ + +I+MYAK G ++ AR +FD
Sbjct: 136 TVVFACAKLGAMHKA-----RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 190
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH---- 121
M ++NV+SW+A+I+ Y HG + LF +L P++ +LAS+L +C L
Sbjct: 191 RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQM 250
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFR 179
G+L+H + KF LD +V AL++MY K C ++A +F+ M R++++W MI +
Sbjct: 251 GRLIHHIVYKFGLDLDHFVCAALVDMYGK-CREIEDARFLFDKMPERDLVTWTVMIGGYA 309
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C N E+L LF +++ EG+ PD V+ ACA L A +
Sbjct: 310 ECG-------------NANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTID 356
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I + F+ D ++ A+I +A+CG + ++++FD+M +++SW++++ AY HGQ +
Sbjct: 357 DYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 416
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL LF M + P+ T VSLL ACSHAGLV+EG + F M E++ V + HY C+
Sbjct: 417 KALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV 476
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR GR+ EA KLI M +E D +W LG+CR H + LAE AAT L +L+P +
Sbjct: 477 VDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNP 536
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ +SNIY +G + R M R++K PG +WIE++N+ H+F+ G HP+ +
Sbjct: 537 GHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSK 596
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I++ L+ L +L+ +GYVP+T+ LHD++EE K LY HSEKLA+ F ++ E
Sbjct: 597 EIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIAT----PE 652
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI+KN+R+C DCH F KL S + G+ I+VRD+NRFHHFK+ CSC DYW
Sbjct: 653 HTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 206/411 (50%), Gaps = 48/411 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ AC N++ +H H++ F + D FV L++MY K ++DAR LFD+M +
Sbjct: 36 VIRACRDLKNLQMGRLIH-HIVYKFGLD-LDHFVCAALVDMYVKCREIEDARFLFDKMQE 93
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC------------ 117
R++V+WT +I GYA+ G A E LF + + P++ ++ +V+ +C
Sbjct: 94 RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARII 153
Query: 118 -DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
DY+ K KF LD V + A+I+MY+K C + A ++F+ ME +NVISW++MI
Sbjct: 154 DDYIQRK-------KFQLD--VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 204
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
AA + +AL LFR + GM PD T + +L AC+ L +
Sbjct: 205 AA-------------YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMG 251
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H ++ K+G + D + AL+ Y +C I ++ +FDKM DLV+W ++ YA
Sbjct: 252 RLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAEC 311
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G A E+L LF M V PD V+++ AC+ G + + + + QLD
Sbjct: 312 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK---FQLDV 368
Query: 353 Y--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
M+D+ + G + A ++ M E + + WS ++ + HG+ R A
Sbjct: 369 ILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGRKA 418
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 213/420 (50%), Gaps = 38/420 (9%)
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFS 133
++ G+A+ G+ CF F L++ P+ ++L V+ +C L G+L+H + KF
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 134 LDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
LD +V AL++MY K C ++A +F+ M+ R++++W MI + C
Sbjct: 61 LDLDHFVCAALVDMYVK-CREIEDARFLFDKMQERDLVTWTVMIGGYAECG--------- 110
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
E+L LF +++ EG+ PD V+ ACA L A + I + F+ D
Sbjct: 111 ----KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV 166
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
++ A+I YA+CG + ++++FD+M +++SW++++ AY HGQ ++AL LF M
Sbjct: 167 ILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSS 226
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRI 366
+ PD T SLL ACS +Q G ++ H ++ G+ LDH+ C +VD+ G+ I
Sbjct: 227 GMLPDKITLASLLYACSDLKNLQMG-RLIHHIVYKFGL--DLDHFVCAALVDMYGKCREI 283
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSN 424
+A L +MP E D V W+V++G + G + + K+++ + P D + V +
Sbjct: 284 EDARFLFDKMP-ERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVP-DKVAMVTVVF 341
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
G+ +KAR I ++ RK L I + A G RE IF ++EE
Sbjct: 342 ACAKLGAMHKARTIDDYIQ----RKKFQLDVILGTAMIDMHAKCGCVESARE-IFDRMEE 396
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/593 (40%), Positives = 359/593 (60%), Gaps = 31/593 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+Y TL C G +K+ +H H++N+ N DL + N L+ MYA+ G L+ AR LFD
Sbjct: 76 LYNTLLKRCTQLGKLKEGKLVHFHVLNS--NFKHDLVIQNSLLFMYARCGSLEGARRLFD 133
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH---- 121
EMP R++VSWT++I+GYAQ+ A + LF +L PNEF+L+S++ C Y+
Sbjct: 134 EMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNC 193
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +HA K+ ++V+V ++L++MY++ C EA VF+ + +N +SWN++IA +
Sbjct: 194 GRQIHACCWKYGCHSNVFVGSSLVDMYAR-CGYLGEAMLVFDKLGCKNEVSWNALIAGY- 251
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+ EEAL LF ++QREG P T+S +L +C+ + +H
Sbjct: 252 ------------ARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLH 299
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K + + N L+H YA+ GSI +++VFDK+ D+VS NS+L YA HG K
Sbjct: 300 AHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGK 359
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA Q F M ++P+ TF+S+L+ACSHA L+ EG F ++ + + P++ HYA +
Sbjct: 360 EAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYF-GLMRKYNIEPKVSHYATI 418
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + +A+ I EMP+EP IW LLG+ + H T + AA ++ +L+P
Sbjct: 419 VDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYP 478
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++NIY +G + +RK MK S V+K P SW+E+EN VH F + HPQ+E
Sbjct: 479 GTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKE 538
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I K E+L ++K +GYVP+TS L ++++ KE L +HSEKLAL FA++N
Sbjct: 539 KIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPP---- 594
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S IRIMKNIR+C DCH+ +K S ++ +EI+VRD+NRFHHF D CSC DYW
Sbjct: 595 GSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
N + L + + + PD ++ +LK C L + VH + F+ D VI N
Sbjct: 54 NSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQN 113
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
+L+ YARCGS+ ++++FD+M + D+VSW S++ YA + +A +AL LF M +P
Sbjct: 114 SLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEP 173
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ T SL+ C + G ++ H+ +G + + +VD+ R G + EA +
Sbjct: 174 NEFTLSSLVKCCGYMASYNCGRQI-HACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLV 232
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGE 397
++ + + V W+ L+ + GE
Sbjct: 233 FDKLGCK-NEVSWNALIAGYARKGE 256
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/590 (39%), Positives = 354/590 (60%), Gaps = 30/590 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+L AC QLH +I + D+FV L++MYAK ++++R +F+ M
Sbjct: 252 TSLLSACVELEFFSLGKQLHSWVIRS--GLASDVFVGCTLVDMYAKSAAVENSRKIFNTM 309
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----DYLHGK 123
NV+SWTALISGY Q +E +LFC++L + PN F+ +SVL +C D+ GK
Sbjct: 310 LHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGK 369
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACK 182
+H +K L V N+LINMY++S E A K F + +N+IS+N+
Sbjct: 370 QLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNT--------- 420
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A + AK + +E+ +++ G+ T++ +L A + T +H+LI
Sbjct: 421 ----AADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALI 474
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K GF + I NALI Y++CG+ + QVF+ M Y ++++W SI+ +A HG A +AL
Sbjct: 475 VKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKAL 534
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF M V+P+ T++++LSACSH GL+ E K F+SM NH + P+++HYACMVDL
Sbjct: 535 ELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDL 594
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G +LEA + I MP + D+++W LGSCR H T+L E AA K+ + EP D +
Sbjct: 595 LGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATY 654
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
+ +SN+Y G ++ +RK MK ++ K G SWIE++N+VH+F G HPQ I+
Sbjct: 655 ILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIY 714
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+L+EL ++K +GY+P T LHD+E+E KE+ L+ HSEK+A+ +A+++ +
Sbjct: 715 DELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALIST----PKPKP 770
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH +K S + G+EIVVRD+NRFHH KD CSCNDYW
Sbjct: 771 IRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 167/331 (50%), Gaps = 31/331 (9%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP- 69
L AC GN++ LH +I++ P D + N LI +Y+K G ++A +F M
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDS--GLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 70 -KRNVVSWTALISGYAQHGNAEECFRLFCSLLQ----YFFPNEFSLASVLISCD----YL 120
KR++VSW+A+IS +A + F +LQ +PNE+ ++L SC +
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162
Query: 121 HGKLVHALALKFS-LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
G + A LK D+HV V ALI+M++K D A VF+ M+ +N+++W MI
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L A++LF ++ E PD T + +L AC L
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSE-------------YTPDKFTLTSLLSACVELEFFSLGKQ 269
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+HS + + G D + L+ YA+ ++ S+++F+ M +H+++SW +++ Y Q
Sbjct: 270 LHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQ 329
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACS 325
+EA++LF NM +V P+ TF S+L AC+
Sbjct: 330 EQEAIKLFCNMLHGHVTPNCFTFSSVLKACA 360
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/598 (39%), Positives = 346/598 (57%), Gaps = 29/598 (4%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L + I +L A + ++ +H +I + D F+ + L++MY K GY +DA
Sbjct: 136 LLADSIVQSLVFAISSCTSVSYCSAIHARVIKSL--NYSDGFIGDRLVSMYFKLGYDEDA 193
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDY 119
+ LFDEMP R++VSW +L+SG + G C FC + PNE +L SV+ +C
Sbjct: 194 QRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAX 253
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
+ GK +H + +K + V N+LINMY K D A ++FE M R+++SWNSM
Sbjct: 254 MGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSM 313
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ + ++LF MK R G+ PD T +L+AC R
Sbjct: 314 VVIHNHNGYAEKGMDLFNLMK-------------RAGINPDQATMVALLRACTDTGLGRQ 360
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
A ++H+ I + GF D +IA AL++ YA+ G ++ S+ +F+++ D ++W ++L YA+
Sbjct: 361 AESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAV 420
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
H +EA++LF M V+ D TF LLSACSH+GLV+EG K F M E + V P+LD
Sbjct: 421 HACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLD 480
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY+CMVDLLGR GR+ +A +LI+ MPMEP S +W LLG+CR +G L + A +L L
Sbjct: 481 HYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSL 540
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+P D ++ +SNIY +G + A +R MK R+ + PG S+IE N++H F G +
Sbjct: 541 DPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQL 600
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP+ + I KLEELI ++ G P+T LHDI+EE K + + HSEKLA+ F ++ G
Sbjct: 601 HPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTG 660
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + I KN+RIC DCH+ K AS L + I++RDS RFHHF D +CSC DYW
Sbjct: 661 S----GVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/629 (38%), Positives = 350/629 (55%), Gaps = 71/629 (11%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
IY TL C +K+ Q+H H+ + L+++N L++MYAK G L DA +FD
Sbjct: 121 IYLTLLKFCLKQRALKEGKQVHAHIKTS---GSIGLYISNRLLDMYAKCGSLVDAEKVFD 177
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE--FSLASVLISC------- 117
EM R++ SW +ISGY + GN E+ LF + PN FS +++ C
Sbjct: 178 EMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM-----PNRDNFSWTAIISGCVQHNRPE 232
Query: 118 ------------DY--------------------LH-GKLVHALALKFSLDAHVYVANAL 144
DY LH GK +H ++ LD+ V +L
Sbjct: 233 EALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSL 292
Query: 145 INMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFL 203
++MY K +EA +F+ ME R+V+SW +MI + K EE L
Sbjct: 293 LDMYGKCGSIEEARYIFDKMEERDVVSWTTMI-------------HTYLKNGRREEGFAL 339
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
FR L + P+ TF+ VL ACA L E +H+ + + GF+ + A+AL+H Y++
Sbjct: 340 FRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSK 399
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSL 320
CG I +K VF+ + DL SW S+L YA HGQ +AL F + +PD F+ +
Sbjct: 400 CGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGV 459
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
LSAC+HAGLV +G + FHS+ E HG+ +DHYAC++DLL R G+ EAE +I EMP++P
Sbjct: 460 LSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKP 519
Query: 381 DSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRK 440
D IW+ LLG CR HG LA+ AA L ++EP + +V ++NIY +G + IR+
Sbjct: 520 DKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRE 579
Query: 441 EMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSL 500
M + K PG+SWIEI VH F+ G HP+ + I + L EL ++K +GYVP+T+
Sbjct: 580 TMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNF 639
Query: 501 ALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLAS 560
LHD+E E KEE L +HSEKLA+ F I++ S + I++ KN+R CVDCHN +K S
Sbjct: 640 VLHDVELEQKEENLSYHSEKLAVAFGIISTPS----GTPIKVFKNLRTCVDCHNAIKFIS 695
Query: 561 DLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ G++I+VRDSNRFH F+ CSC DYW
Sbjct: 696 NITGRKIIVRDSNRFHCFEGGSCSCKDYW 724
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/598 (40%), Positives = 357/598 (59%), Gaps = 33/598 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ +I TL C + + +H ++N+ + DL + N L+N+YAK G L AR
Sbjct: 14 AREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRD--DLVMQNTLLNLYAKCGDLVYARK 71
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLI------S 116
LFDEM R+VV+WTALI+GY+QH ++ L +L+ PN+F+LAS+L S
Sbjct: 72 LFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGS 131
Query: 117 CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSM 174
D L G+ +H L L++ D++VYV+ A+++MY++ C +EA +F+ M +N +SWN++
Sbjct: 132 TDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYAR-CHHLEEAQLIFDVMVSKNEVSWNAL 190
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
IA + A+ ++A LF + RE + P T+S VL ACA + +
Sbjct: 191 IAGY-------------ARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQ 237
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH+L+ K+G + + N L+ YA+ GSI +K+VFD++ D+VSWNS+L Y+
Sbjct: 238 GKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQ 297
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG K ALQ F M + P+ TF+ +L+ACSHAGL+ EG F M++ + V PQ+
Sbjct: 298 HGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYF-DMMKKYNVEPQIS 356
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY MVDLLGR G + A + I EMP++P + +W LLG+CR H L AA + +L
Sbjct: 357 HYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFEL 416
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+ V + NIY L+G +N A +RK MK S V+K P SW+E+EN VH F +
Sbjct: 417 DSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDA 476
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HPQR I E++ ++K +GYVP++S L ++++ +E +L +HSEKLAL FA++N
Sbjct: 477 HPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTP 536
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S IRI KNIRIC DCH+ K S L+ +EI+VRD+NRFHHF D CSC DYW
Sbjct: 537 P----GSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/596 (40%), Positives = 358/596 (60%), Gaps = 32/596 (5%)
Query: 4 STQIYATLFHACALHGNIKQ---AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ I+AT+ CA NIK+ A QLH +I N DL + L+ Y+K +DD
Sbjct: 293 TQTIFATVIKLCA---NIKEMSFAKQLHCQVIKN--GSDFDLNIKTALMVAYSKCSEIDD 347
Query: 61 ARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD 118
A LF M +NVVSWTA+ISGY Q+G + LFC + + PN F+ +++L +
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANA 407
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
+ +HAL +K + + V AL + YSK A+EA K+FE ++ +++++W++M++
Sbjct: 408 AVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSG 467
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG-LVTERHAS 236
+ A+M + E A+ +F QL +EG+ P+ TFS VL ACA +
Sbjct: 468 Y-------------AQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGK 514
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
HS K GF + +++AL+ YA+ G+I + +VF + DLVSWNS++ YA HG
Sbjct: 515 QFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHG 574
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
K++L++F M N++ D TF+ ++SAC+HAGLV EG + F M++++ +VP ++HY
Sbjct: 575 CGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHY 634
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+CMVDL R G + +A LI +MP + IW LL +CR H +L ELAA KL L+P
Sbjct: 635 SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQP 694
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
DS +V +SNIY +G++ + +RK M +V+K G SWIE++N+ F +G HP
Sbjct: 695 QDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHP 754
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
Q + I+ KLEEL +LK GY P+T LHD+EEEHKE L HSE+LA+ F ++
Sbjct: 755 QSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLI----A 810
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+I+KN+R+C DCH +KL S + G++IVVRDSNRFHHFK CSC DYW
Sbjct: 811 TPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 194/368 (52%), Gaps = 29/368 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ V L++MY K ++D +FDEM +NVVSWT+L++GY Q+G E+ +LF +
Sbjct: 125 EDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQM 184
Query: 100 -LQYFFPNEFSLASVL--ISCDYL--HGKLVHALALKFSLDAHVYVANALINMYSKSC-A 153
L+ PN F+ A+VL ++ D G VH + +K LD+ ++V N+++NMYSKS
Sbjct: 185 QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMV 244
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A VF++ME RN +SWNSMIA F L+ +A ELF +M+ EG+
Sbjct: 245 SDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR-------------LEGVK 291
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
F+ V+K CA + A +H + K G + D I AL+ AY++C I + ++
Sbjct: 292 LTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKL 351
Query: 274 FDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
F M ++VSW +I+ Y +G+ A+ LF M V+P+ T+ ++L+A +
Sbjct: 352 FCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP 411
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
Q V + EN V + D ++G EA K+ E+ E D V WS +L
Sbjct: 412 SQIHALVVKTNYENSPSVG-----TALSDSYSKIGDANEAAKIF-ELIDEKDIVAWSAML 465
Query: 390 GSCRKHGE 397
+ G+
Sbjct: 466 SGYAQMGD 473
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 171/352 (48%), Gaps = 27/352 (7%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISC-- 117
++ LFDE P++ + L+ ++++ +E LF L + P + SL+ VL C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSM 174
D + GK VH +K V V +L++MY K+ ++ +VF+ M +NV+SW S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+A +R L QA++LF+ Q+Q EG+ P+ TF+ VL A
Sbjct: 165 LAGYRQNGLNEQALKLFS-------------QMQLEGIKPNPFTFAAVLGGLAADGAVEK 211
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH+++ K G + + N++++ Y++ +S +K VFD M + VSWNS++ +
Sbjct: 212 GVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVT 271
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN--KVFHSMLENHGVVPQ 349
+G EA +LF M V+ F +++ C++ ++E + K H + +G
Sbjct: 272 NGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN---IKEMSFAKQLHCQVIKNGSDFD 328
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
L+ ++ + I +A KL M + V W+ ++ ++G T A
Sbjct: 329 LNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRA 380
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/599 (41%), Positives = 358/599 (59%), Gaps = 34/599 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ I+ +L + A G + A + + +NF +D LI YA +GY+D
Sbjct: 160 FVSDVFIHTSLINMYAQSGEMNNAQLVFDQ--SNF----RDAISFTALIAGYALWGYMDR 213
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY 119
AR LFDEMP ++VVSW A+I+GYAQ G ++E LF + + PNE ++ SVL +C
Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ 273
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
+ G + + L +++ + NALI+MYSK C D A ++F++M R+VISWN
Sbjct: 274 SNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSK-CGDLQTARELFDDMLERDVISWNV 332
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI + M + +EAL LFR++ G+ P TF +L +CA L
Sbjct: 333 MIGGY-------------THMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAID 379
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H+ I K T ++ +LI YA+CG+I ++QVFD M L SWN+++ A
Sbjct: 380 LGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLA 439
Query: 294 LHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+HGQA +A +LFS M+ ++P+ TFV +LSAC HAGLV G + F SM++++ + P+
Sbjct: 440 MHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKS 499
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
HY CM+DLLGR G EAE L++ M ++PD IW LLG+CR HG L EL A +L +
Sbjct: 500 QHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFE 559
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP + +V +SNIY +G ++ IR + ++K PG + IE++N VHEF G K
Sbjct: 560 LEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDK 619
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HPQ E I++ LEE+ QLK G+V +TS L+D++EE KE L HHSEKLA+ F +++
Sbjct: 620 VHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLIST 679
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + IRI+KN+R+C +CH+ KL S + +EI+ RD NRFHHFKD CSCNDYW
Sbjct: 680 ----KPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 200/427 (46%), Gaps = 35/427 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSWT 77
+I+ Q+H H+I + LF + LI A + G + A LF+ + + N+ W
Sbjct: 41 SIRTFKQIHAHIIKTGLH--NTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWN 98
Query: 78 ALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HGKLVHALALKF 132
++I G + + F ++ PN ++ +L SC L GK +HA LK
Sbjct: 99 SMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKL 158
Query: 133 SLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
+ V++ +LINMY++S + A VF+ FR+ IS+ ++IA + +A +LF
Sbjct: 159 GFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLF 218
Query: 192 ------------------AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
A+M +EAL LF +++ + P+ T VL ACA
Sbjct: 219 DEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALD 278
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+++ S I G + + NALI Y++CG + ++++FD M D++SWN ++ Y
Sbjct: 279 LGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYT 338
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
KEAL LF M V+P TF+S+L +C+H G + G K H+ + +
Sbjct: 339 HMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG-KWIHAYINKNFNSVST 397
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
++DL + G I+ A ++ M ++ + W+ ++ HG+ A +K+
Sbjct: 398 SLSTSLIDLYAKCGNIVAARQVFDGMKIKSLAS-WNAMICGLAMHGQADKAFELFSKMSS 456
Query: 411 --LEPGD 415
+EP +
Sbjct: 457 DGIEPNE 463
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/592 (40%), Positives = 348/592 (58%), Gaps = 33/592 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA +K +H + + DL L++MYAK G+ A F+ M
Sbjct: 435 SILPACADLSLLKLGKSIHCFTVK--ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS 492
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKL 124
R++V+W +LI+GYAQ G+ +F L L P+ ++ V+ +C D G
Sbjct: 493 SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTC 552
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEF-RNVISWNSMIAAFRACK 182
+H L +K ++ +V NALI+MY+K + A +F +F ++ ++WN +IAA+
Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY---- 608
Query: 183 LEAQAIELFAKMKN--EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
M+N +EA+ F Q++ E P+ TF VL A A L R A H+
Sbjct: 609 -----------MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHA 657
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I + GF +T++ N+LI YA+CG + S+++F++M + D VSWN++L YA+HG
Sbjct: 658 CIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDR 717
Query: 301 ALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ LFS M VQ DS +FVS+LSAC HAGLV+EG K+FHSM + + + P L+HYACMV
Sbjct: 718 AIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMV 777
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G E I+ MP+EPD+ +W LLGSCR H +L E+A L +LEP +
Sbjct: 778 DLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPA 837
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
FV +S+IY SG + A R +M ++K PG SW+E++N+VH F G K HPQ E+
Sbjct: 838 HFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLES 897
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ L+ +++ +GYVP+ S L ++EEE KE LY HSE+LA+ FA++N
Sbjct: 898 MHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNT----PPG 953
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I+I+KN+R+C DCH K S + + I+VRD+ RFHHF+D ICSCNDYW
Sbjct: 954 STIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 198/390 (50%), Gaps = 26/390 (6%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQY 102
V+N LI++Y+K G +D AR +FD+M ++ VSW +++GYA +G E LF + L
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 324
Query: 103 FFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AW 157
N+ S S + + D GK +H AL+ +D+ + VA L+ MY+K E A
Sbjct: 325 VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK 384
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
++F ++ R++++W+++IAA + EEAL LF+++Q + M P+
Sbjct: 385 QLFWGLQGRDLVAWSAIIAAL-------------VQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T +L ACA L + ++H K + D AL+ YA+CG + + F++M
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
+ D+V+WNS++ YA G A+ +F + + PD+ T V ++ AC+ + +G
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ H ++ G ++D+ + G + AE L + D V W+V++ + +
Sbjct: 552 CI-HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQ 610
Query: 395 HGETR--LAELAATKLKQLEPGDSLGFVQM 422
+G + ++ +L+ P +S+ FV +
Sbjct: 611 NGHAKEAISSFHQMRLENFHP-NSVTFVSV 639
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 186/412 (45%), Gaps = 54/412 (13%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC N+++ + H + + +D+F+ L++MY+K G L AR +FD+
Sbjct: 132 FTFVLKACTGALNLQEGVWFHGEI--DRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDK 189
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-----------LQYFFPNEFSLASVLIS 116
MPKR+VV+W A+I+G +Q + E F S+ L FP L+++ +
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL- 248
Query: 117 CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSM 174
C +HG + F D V+N LI++YSK C D A +VF+ M ++ +SW +M
Sbjct: 249 CRSIHGYV-------FRRDFSSAVSNGLIDLYSK-CGDVDVARRVFDQMVDQDDVSWGTM 300
Query: 175 IAAFRACKLEAQAIELFAKMK------NEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+A + + +ELF KMK N+ A+ F A A
Sbjct: 301 MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFL-------------------AAAE 341
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ +H + + D ++A L+ YA+CG +KQ+F + DLV+W++I
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAI 401
Query: 289 LKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ A G +EAL LF M Q P+ T +S+L AC+ L++ G K H
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKAD 460
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ L +V + + G A M D V W+ L+ + G+
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLINGYAQIGD 511
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 179/379 (47%), Gaps = 28/379 (7%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL-FCSLLQYFF 104
HLIN+Y+ F D AR +FD P + + W ++I Y + E + +C + +
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
P++++ VL +C + G H + L+ V++ L++MYSK A +V
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ M R+V++WN+MIA ++ ++ EA+ FR +Q G+ P +
Sbjct: 187 FDKMPKRDVVAWNAMIAG-------------LSQSEDPCEAVDFFRSMQLVGVEPSSVSL 233
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ L ++H + + F + ++N LI Y++CG + ++++VFD+M
Sbjct: 234 LNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRVFDQMVD 291
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D VSW +++ YA +G E L+LF M NV+ + + VS A + +++G ++
Sbjct: 292 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEI 351
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
L+ L MV + + G +A++L + D V WS ++ + + G
Sbjct: 352 HGCALQQRIDSDILVATPLMV-MYAKCGETEKAKQLFWGLQGR-DLVAWSAIIAALVQTG 409
Query: 397 --ETRLAELAATKLKQLEP 413
E L+ + ++++P
Sbjct: 410 YPEEALSLFQEMQNQKMKP 428
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 33/311 (10%)
Query: 96 FCSLLQYFFPNEFSLASVLISCDYLHGKL-VHALALKFSLDAHVYVANALINMYS--KSC 152
F SL + N +L SC +L+ L +HA + H + + LIN+YS C
Sbjct: 21 FPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKC 79
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A VF++ + I WNSMI A+ + K EAL ++ + +G+
Sbjct: 80 -DLARSVFDSTPNPSRILWNSMIRAY-------------TRSKQYNEALEMYYCMVEKGL 125
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD TF+ VLKAC G + + H I + G E D I L+ Y++ G + +++
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFDKM D+V+WN+++ + EA+ F +M V+P S + ++L
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYAC----MVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
++ + HG V + D + ++DL + G + A ++ +M ++ D V W
Sbjct: 246 IELCRSI-------HGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSW 297
Query: 386 SVLLGSCRKHG 396
++ +G
Sbjct: 298 GTMMAGYAHNG 308
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 335/562 (59%), Gaps = 30/562 (5%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
EP+ V L+ MYAK G + AR +FD +P++NVV+WT LI+GYAQ G + L
Sbjct: 182 EPR---VGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLE 238
Query: 98 SLLQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
++ Q PN+ + AS+L C HGK VH ++ ++V N+LI MY K
Sbjct: 239 TMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCG 298
Query: 153 A-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+EA K+F ++ R+V++W +M+ + A++ +EA+ LFR++Q++G
Sbjct: 299 GLEEARKLFSDLPHRDVVTWTAMVTGY-------------AQLGFHDEAINLFRRMQQQG 345
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ PD TF+ VL +C+ + +H + G+ D + +AL+ YA+CGS+ +
Sbjct: 346 IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDAS 405
Query: 272 QVFDKMTYHDLVSWNSILKAY-ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
VF++M+ ++V+W +I+ A HG+ +EAL+ F M ++PD TF S+LSAC+H
Sbjct: 406 LVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV+EG K F SM ++G+ P ++HY+C VDLLGR G + EAE +I MP P +W
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +CR H + E AA + +L+P D +V +S+IY +G + A +R+ M+ V
Sbjct: 526 LLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDV 585
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
K PG SWIE++ +VH F K HP+ E I+ +L +L Q+K MGYVP+T LHD++E
Sbjct: 586 VKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDE 645
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L+ HSE+LA+ + +M IRI+KN+R+C DCH K S ++G+EI
Sbjct: 646 EQKERILFSHSERLAITYGLMKTPP----GMPIRIVKNLRVCGDCHTATKFISKVVGREI 701
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+ RD+ RFHHF D +CSC D+W
Sbjct: 702 IARDAQRFHHFADGVCSCGDFW 723
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 217/420 (51%), Gaps = 41/420 (9%)
Query: 1 FLHSTQIYATLFHA----CALHGNIKQAMQLHEHMINNF--PNEPQDLFVTNHLINMYAK 54
L T++Y+ +F CA +++Q ++H ++ + PN ++ N L++MYAK
Sbjct: 39 ILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNR----YLENTLLSMYAK 94
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASV 113
G L DAR +FD + RN+VSWTA+I + E F+ + ++ L P++ + S+
Sbjct: 95 CGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSL 154
Query: 114 L---ISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRN 167
L + + L G+ VH ++ L+ V +L+ MY+K C D +A +F+ + +N
Sbjct: 155 LNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAK-CGDISKARVIFDRLPEKN 213
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
V++W +IA +A+ + AL L +Q+ +AP+ TF+ +L+ C
Sbjct: 214 VVTWTLLIAG-------------YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCT 260
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
H VH I + G+ + + N+LI Y +CG + ++++F + + D+V+W +
Sbjct: 261 TPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTA 320
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++ YA G EA+ LF M ++PD TF S+L++CS +QEG ++ H L +
Sbjct: 321 MVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRI-HQQLVHA 379
Query: 345 GVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS-VLLGSCRKHGETRLA 401
G LD Y + +V + + G + +A + +M E + V W+ ++ G C +HG R A
Sbjct: 380 GY--NLDVYLQSALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGCCAQHGRCREA 436
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 180/358 (50%), Gaps = 37/358 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ C ++ ++H ++I + ++L+V N LI MY K G L++AR LF +
Sbjct: 252 FASILQGCTTPAALEHGKKVHRYIIQS--GYGRELWVVNSLITMYCKCGGLEEARKLFSD 309
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD-------- 118
+P R+VV+WTA+++GYAQ G +E LF + Q P++ + SVL SC
Sbjct: 310 LPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEG 369
Query: 119 -YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
+H +LVHA ++LD VY+ +AL++MY+K D+A VF M RNV++W ++I
Sbjct: 370 KRIHQQLVHA---GYNLD--VYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIIT 424
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERH 234
C A+ EAL F Q++++G+ PD TF+ VL AC GLV E
Sbjct: 425 G--CC----------AQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 472
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYA 293
S+ YG + + + R G + ++ V M + S W ++L A
Sbjct: 473 KH-FRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACR 531
Query: 294 LHGQAKEALQLFSN-MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+H + + N + + P D +V+L S + AG ++ KV ++E VV +
Sbjct: 532 VHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKV-RQVMEKRDVVKE 588
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 123/242 (50%), Gaps = 7/242 (2%)
Query: 176 AAFRACKLEAQA--IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
A FR + A + + + K +EAL + + +G F +L+ CA L +
Sbjct: 5 AGFRKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLE 64
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH+ I K G + + + N L+ YA+CGS++ +++VFD + ++VSW ++++A+
Sbjct: 65 QGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFV 124
Query: 294 LHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+ EA + + M + +PD TFVSLL+A ++ L+Q G KV ++E G+ +
Sbjct: 125 AGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEA-GLELEP 183
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+V + + G I +A + +P E + V W++L+ + G+ +A ++Q
Sbjct: 184 RVGTSLVGMYAKCGDISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQ 242
Query: 411 LE 412
E
Sbjct: 243 AE 244
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/589 (41%), Positives = 357/589 (60%), Gaps = 28/589 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L C + G ++QA +HEH+ +N EP+ F+ N LINMY KFG LD+AR+LFDE
Sbjct: 19 YSELIKCCLVRGAVQQARLVHEHVFSN-GYEPKT-FLINTLINMYVKFGLLDEARNLFDE 76
Query: 68 MPKRNVVSWTALISGYAQHG-NAEECFRLFCSLLQYFFPNEFSLASVLISCD-YLHGKLV 125
MP RNVVSWT +IS Y+ N + L L + PN ++ +SVL +CD L+ + +
Sbjct: 77 MPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQL 136
Query: 126 HALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H LK L++ V+V +ALI+ YSK +A VF M +++ WNS+I F
Sbjct: 137 HGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGF------ 190
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
A+ + +E L L+++++R D T + VL+AC GL VH + K
Sbjct: 191 -------AQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK 243
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKEALQ 303
Y + D ++ NAL+ Y +CGS+ + +F +M T D++SW++++ A +G + +AL+
Sbjct: 244 Y--DQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALK 301
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M +P+ T + +L ACSHAGLV +G F SM E+ G+ P +HY C++DLL
Sbjct: 302 LFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLL 361
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR G++ EA KLI EM EPD+V W +LLG+CR H LA AA ++ +L+P D+ ++
Sbjct: 362 GRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYI 421
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SNIY S + +R++M+ V+K PG SWIE+ +VH F G HP+ E I +
Sbjct: 422 LLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKR 481
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
+L +LI +L +GYVP+T+ L D+E E E+ L +HSEKLA+VF +M SL +++ I
Sbjct: 482 ELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLM---SLPNQKT-I 537
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I KN+RIC DCH F KL S L + IV+RD R+HHF+ +CSC DYW
Sbjct: 538 HIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+ R ++ D T+S ++K C + A VH + G+E T + N LI+ Y + G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYA---LHGQAKEALQLFSNMNVQPDSATFVSLLSA 323
+ ++ +FD+M ++VSW +++ AY+ L+ +A + L L V+P+ T+ S+L A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C GL+ + H + G+ + + ++D ++G +A + EM + D V
Sbjct: 127 CD--GLLNL--RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLV 181
Query: 384 IWSVLLGS 391
+W+ ++G
Sbjct: 182 VWNSIIGG 189
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/599 (39%), Positives = 347/599 (57%), Gaps = 29/599 (4%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ I +L A + ++ +H +I + D F+ + L++MY K GY +D
Sbjct: 115 FIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSL--NYSDGFIGDRLVSMYFKLGYDED 172
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCD 118
A+ LFDEMP +++VSW +L+SG + G C FC + PNE +L SV+ +C
Sbjct: 173 AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACA 232
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
+ GK +H + +K + V N+LINMY K D A ++FE M R+++SWNS
Sbjct: 233 DMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNS 292
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
M+ + ++LF MK R G+ PD T +L+AC R
Sbjct: 293 MVVIHNHNGYAEKGMDLFNLMK-------------RAGINPDQATMVALLRACTDTGLGR 339
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
A ++H+ I + GF D +IA AL++ YA+ G ++ S+ +F+++ D ++W ++L YA
Sbjct: 340 QAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYA 399
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+H +EA++LF M V+ D TF LLSACSH+GLV+EG K F M E + V P+L
Sbjct: 400 VHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRL 459
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
DHY+CMVDLLGR GR+ +A +LI+ MPMEP S +W LLG+CR +G L + A +L
Sbjct: 460 DHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS 519
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
L+P D ++ +SNIY +G + A +R MK R+ + PG S+IE N++H F G +
Sbjct: 520 LDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQ 579
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP+ + I KLEELI +++ G P+T LHDI+EE K + + HSEKLA+ F ++
Sbjct: 580 LHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVT 639
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
GS + I KN+RIC DCH+ K AS L + I++RDS RFHHF D +CSC DYW
Sbjct: 640 GS----GVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/598 (39%), Positives = 367/598 (61%), Gaps = 37/598 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
IY L C + G +KQ +H H++N+ F N DL + N ++ MYAK G L+ AR +F
Sbjct: 93 IYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRN---DLVIKNSILFMYAKCGSLEIARQVF 149
Query: 66 DEMPKRNVVSWTALISGYAQHG---NAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYL- 120
DEM ++VV+WT++I+GY+Q G +A LF +++ PNEF+L+S++ C +L
Sbjct: 150 DEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLG 209
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
GK +H K+ +V+V ++L++MY++ C + E+ VF+ +E +N +SWN++I
Sbjct: 210 SCVDGKQIHGCCWKYGFQENVFVGSSLVDMYAR-CGELRESRLVFDELESKNEVSWNALI 268
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ F A+ EEAL LF ++QREG T+S +L + + +
Sbjct: 269 SGF-------------ARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQG 315
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H+ + K G + + N L+H YA+ G+I +K+VFD++ D+VS NS+L YA H
Sbjct: 316 KWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQH 375
Query: 296 GQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G KEA++LF M ++P+ TF+S+L+ACSHAGL+ EG F +++ +G+ P+L
Sbjct: 376 GLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFE-LMKKYGLEPKLS 434
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY +VDL GR G + +A+ I EMP+EP++ IW LLG+ + H T + AA K+ +L
Sbjct: 435 HYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLEL 494
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+P +SNIY +G + +RKEMK S ++K P SW+EIEN VH F++
Sbjct: 495 DPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDIS 554
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HPQ+ +++ E L ++K +GYVP+TS ++++ KE L +HSEKLAL FA++N
Sbjct: 555 HPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNT- 613
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ SVIRIMKNIR+C DCH+ +K S ++ +EI+VRD+NRFHHF+D CSC DYW
Sbjct: 614 ---KPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
N L + + + PD ++ +LK C L + VH+ + F +D VI N
Sbjct: 71 NSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKN 130
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG---QAKEALQLFSNM---N 309
+++ YA+CGS+ +++QVFD+M D+V+W S++ Y+ G A AL LF M
Sbjct: 131 SILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDG 190
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
++P+ SL+ C G +G ++ H +G + + +VD+ R G + E+
Sbjct: 191 LRPNEFALSSLVKCCGFLGSCVDGKQI-HGCCWKYGFQENVFVGSSLVDMYARCGELRES 249
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ E+ + + V W+ L+ + GE
Sbjct: 250 RLVFDELESK-NEVSWNALISGFARKGE 276
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/560 (40%), Positives = 333/560 (59%), Gaps = 27/560 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D F+ + L++MY K GY +DA+ LFDEMP +++VSW +L+SG + G C FC +
Sbjct: 95 SDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRM 154
Query: 100 LQYFF--PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
PNE +L SV+ +C + GK +H + +K + V N+LINMY K
Sbjct: 155 RTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGF 214
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A ++FE M R+++SWNSM+ + ++LF MK R G+
Sbjct: 215 LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK-------------RAGI 261
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD T +L+AC R A ++H+ I + GF D +IA AL++ YA+ G ++ S+
Sbjct: 262 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 321
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
+F+++ D ++W ++L YA+H +EA++LF M V+ D TF LLSACSH+GL
Sbjct: 322 IFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 381
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+EG K F M E + V P+LDHY+CMVDLLGR GR+ +A +LI+ MPMEP S +W LL
Sbjct: 382 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 441
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G+CR +G L + A +L L+P D ++ +SNIY +G + A +R MK R+ +
Sbjct: 442 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 501
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PG S+IE N++H F G + HP+ + I KLEELI +++ G P+T LHDI+EE
Sbjct: 502 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEV 561
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K + + HSEKLA+ F ++ GS + I KN+RIC DCH+ K AS L + I++
Sbjct: 562 KVDMINKHSEKLAIAFGLLVTGS----GVPLIITKNLRICGDCHSTAKFASLLEKRTIII 617
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RDS RFHHF D +CSC DYW
Sbjct: 618 RDSKRFHHFADGLCSCRDYW 637
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/591 (38%), Positives = 340/591 (57%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + ACA +K ++H + D+ V L+ MY K G +++AR +FD
Sbjct: 132 YMIILKACASLSALKWGKEVHACI--RHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHG---- 122
+ +++SWT +I YAQ GN +E +RL + Q F PN + S+L +C
Sbjct: 190 LMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWV 249
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
K VH AL L+ V V AL+ MY+KS + D+A VF+ M+ R+V+SWN MI AF
Sbjct: 250 KRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF--- 306
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ EA LF Q+Q EG PD F +L ACA +H
Sbjct: 307 ----------AEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRH 356
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
G E D + AL+H Y++ GSI ++ VFD+M ++VSWN+++ A HG ++A
Sbjct: 357 ALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDA 416
Query: 302 LQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L++F M V+PD TFV++LSACSHAGLV EG + +M + +G+ P + H CMVD
Sbjct: 417 LEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVD 476
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR GR++EA+ I M ++PD W LLGSCR +G L EL A + +L+P ++
Sbjct: 477 LLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAAT 536
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SNIY +G ++ +R M+ +RK PG SWIE++N++H+F HP+ + I
Sbjct: 537 YVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEI 596
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +++I ++K GY+P+T L L + + KE + HSEKLA+V+ +M+ +
Sbjct: 597 NESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPP----GN 652
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH KL S + G+EI+VRD+NRFHHFKD +CSC DYW
Sbjct: 653 PIRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 207/399 (51%), Gaps = 26/399 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+Y + C ++ A Q+H+ +I + Q+ V N+L+++Y + G L +AR +FD
Sbjct: 30 MYVEVLKRCLKQKDLMAAKQVHDCIIKS--RMEQNAHVMNNLLHVYIECGRLQEARCVFD 87
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH---- 121
+ K++ SW A+I+GY +H +AE+ RLF + + PN + +L +C L
Sbjct: 88 ALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKW 147
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK VHA L++ V V AL+ MY K +EA ++F+N+ ++ISW MI A
Sbjct: 148 GKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGA--- 204
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+A+ N +EA L Q+++EG P+ T+ +L ACA + VH
Sbjct: 205 ----------YAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHR 254
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
G E D + AL+ YA+ GSI ++ VFD+M D+VSWN ++ A+A HG+ E
Sbjct: 255 HALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHE 314
Query: 301 ALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A LF M + PD+ F+S+L+AC+ AG ++ K+ L++ G+ + +V
Sbjct: 315 AYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDS-GLEVDVRVGTALV 373
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + G I +A + M + + V W+ ++ +HG
Sbjct: 374 HMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQHG 411
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 164/317 (51%), Gaps = 25/317 (7%)
Query: 89 AEECFRLFCSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANAL 144
+E L L + + F VL C D + K VH +K ++ + +V N L
Sbjct: 10 SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 145 INMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
+++Y + C EA VF+ + ++ SWN+MIA + + K+ E+A+
Sbjct: 70 LHVYIE-CGRLQEARCVFDALVKKSGASWNAMIAGY-------------VEHKHAEDAMR 115
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
LFR++ EG+ P+ T+ I+LKACA L + VH+ I G E D + AL+ Y
Sbjct: 116 LFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYG 175
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
+CGSI+ ++++FD + HD++SW ++ AYA G KEA +L M +P++ T+VS
Sbjct: 176 KCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVS 235
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+L+AC+ G ++ +V L+ G+ + +V + + G I +A + M +
Sbjct: 236 ILNACASEGALKWVKRVHRHALDA-GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR 294
Query: 380 PDSVIWSVLLGSCRKHG 396
D V W+V++G+ +HG
Sbjct: 295 -DVVSWNVMIGAFAEHG 310
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 123/248 (49%), Gaps = 9/248 (3%)
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
E + L +LQR G+ D + VLK C A VH I K E + + N L
Sbjct: 11 EAIVVLMNRLQR-GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
+H Y CG + ++ VFD + SWN+++ Y H A++A++LF M VQP++
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T++ +L AC+ ++ G +V H+ + + G+ + ++ + G+ G I EA ++
Sbjct: 130 GTYMIILKACASLSALKWGKEV-HACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFD 188
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSF 432
+ M D + W+V++G+ + G + A +++Q +P +++ +V + N G+
Sbjct: 189 NL-MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKP-NAITYVSILNACASEGAL 246
Query: 433 NKARLIRK 440
+ + +
Sbjct: 247 KWVKRVHR 254
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/592 (39%), Positives = 347/592 (58%), Gaps = 33/592 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA +K +H + + DL L++MYAK G+ A F+ M
Sbjct: 435 SILPACADLSLLKLGKSIHCFTVK--ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS 492
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKL 124
R++V+W +LI+GYAQ G+ +F L L P+ ++ V+ +C D G
Sbjct: 493 SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTC 552
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEF-RNVISWNSMIAAFRACK 182
+H L +K ++ +V NALI+MY+K + A +F +F ++ ++WN +IAA+
Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY---- 608
Query: 183 LEAQAIELFAKMKN--EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
M+N +EA+ F Q++ E P+ TF VL A A L R A H+
Sbjct: 609 -----------MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHA 657
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I + GF +T++ N+LI YA+CG + S+++F++M + D VSWN++L YA+HG
Sbjct: 658 CIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDR 717
Query: 301 ALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ LFS M VQ DS +FVS+LSAC H GLV+EG K+FHSM + + + P L+HYACMV
Sbjct: 718 AIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMV 777
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G E I+ MP+EPD+ +W LLGSCR H +L E+A L +LEP +
Sbjct: 778 DLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPA 837
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
FV +S+IY SG + A R +M ++K PG SW+E++N+VH F G K HPQ E+
Sbjct: 838 HFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLES 897
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ L+ +++ +GYVP+ S L ++EEE KE LY HSE+LA+ FA++N
Sbjct: 898 MHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNT----PPG 953
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I+I+KN+R+C DCH K S + + I+VRD+ RFHHF+D ICSCNDYW
Sbjct: 954 STIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 198/390 (50%), Gaps = 26/390 (6%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQY 102
V+N LI++Y+K G +D AR +FD+M ++ VSW +++GYA +G E LF + L
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 324
Query: 103 FFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AW 157
N+ S S + + D GK +H AL+ +D+ + VA L+ MY+K E A
Sbjct: 325 VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK 384
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
++F ++ R++++W+++IAA + EEAL LF+++Q + M P+
Sbjct: 385 QLFWGLQGRDLVAWSAIIAAL-------------VQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T +L ACA L + ++H K + D AL+ YA+CG + + F++M
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
+ D+V+WNS++ YA G A+ +F + + PD+ T V ++ AC+ + +G
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ H ++ G ++D+ + G + AE L + D V W+V++ + +
Sbjct: 552 CI-HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQ 610
Query: 395 HGETR--LAELAATKLKQLEPGDSLGFVQM 422
+G + ++ +L+ P +S+ FV +
Sbjct: 611 NGHAKEAISSFHQMRLENFHP-NSVTFVSV 639
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 186/412 (45%), Gaps = 54/412 (13%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC N+++ + H + + +D+F+ L++MY+K G L AR +FD+
Sbjct: 132 FTFVLKACTGALNLQEGVWFHGEI--DRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDK 189
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-----------LQYFFPNEFSLASVLIS 116
MPKR+VV+W A+I+G +Q + E F S+ L FP L+++ +
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL- 248
Query: 117 CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSM 174
C +HG + F D V+N LI++YSK C D A +VF+ M ++ +SW +M
Sbjct: 249 CRSIHGYV-------FRRDFSSAVSNGLIDLYSK-CGDVDVARRVFDQMVDQDDVSWGTM 300
Query: 175 IAAFRACKLEAQAIELFAKMK------NEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+A + + +ELF KMK N+ A+ F A A
Sbjct: 301 MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFL-------------------AAAE 341
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ +H + + D ++A L+ YA+CG +KQ+F + DLV+W++I
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAI 401
Query: 289 LKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ A G +EAL LF M Q P+ T +S+L AC+ L++ G K H
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKAD 460
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ L +V + + G A M D V W+ L+ + G+
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLINGYAQIGD 511
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 179/379 (47%), Gaps = 28/379 (7%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL-FCSLLQYFF 104
HLIN+Y+ F D AR +FD P + + W ++I Y + E + +C + +
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
P++++ VL +C + G H + L+ V++ L++MYSK A +V
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ M R+V++WN+MIA ++ ++ EA+ FR +Q G+ P +
Sbjct: 187 FDKMPKRDVVAWNAMIAG-------------LSQSEDPCEAVDFFRSMQLVGVEPSSVSL 233
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ L ++H + + F + ++N LI Y++CG + ++++VFD+M
Sbjct: 234 LNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRVFDQMVD 291
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D VSW +++ YA +G E L+LF M NV+ + + VS A + +++G ++
Sbjct: 292 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEI 351
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
L+ L MV + + G +A++L + D V WS ++ + + G
Sbjct: 352 HGCALQQRIDSDILVATPLMV-MYAKCGETEKAKQLFWGLQGR-DLVAWSAIIAALVQTG 409
Query: 397 --ETRLAELAATKLKQLEP 413
E L+ + ++++P
Sbjct: 410 YPEEALSLFQEMQNQKMKP 428
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 33/311 (10%)
Query: 96 FCSLLQYFFPNEFSLASVLISCDYLHGKL-VHALALKFSLDAHVYVANALINMYS--KSC 152
F SL + N +L SC +L+ L +HA + H + + LIN+YS C
Sbjct: 21 FPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKC 79
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A VF++ + I WNSMI A+ + K EAL ++ + +G+
Sbjct: 80 -DLARSVFDSTPNPSRILWNSMIRAY-------------TRSKQYNEALEMYYCMVEKGL 125
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD TF+ VLKAC G + + H I + G E D I L+ Y++ G + +++
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFDKM D+V+WN+++ + EA+ F +M V+P S + ++L
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYAC----MVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
++ + HG V + D + ++DL + G + A ++ +M ++ D V W
Sbjct: 246 IELCRSI-------HGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSW 297
Query: 386 SVLLGSCRKHG 396
++ +G
Sbjct: 298 GTMMAGYAHNG 308
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/615 (37%), Positives = 351/615 (57%), Gaps = 70/615 (11%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-- 98
D V + L +MY K + DAR LFD MP R+VV W+A+I+GY++ G EE LF
Sbjct: 138 DSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMR 197
Query: 99 ----------------------------------LLQYFFPNEFSLASVL--ISC--DYL 120
L+Q F+P+ +++ VL + C D +
Sbjct: 198 SGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVV 257
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G VH +K L + +V +A+++MY K C E +VF+ +E + S N+ +
Sbjct: 258 VGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLS 317
Query: 180 ACKLEAQAIELFAKMKNEE----------------------EALFLFRQLQREGMAPDWC 217
+ A+E+F K K+++ EAL LFR +Q G+ P+
Sbjct: 318 RNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAV 377
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T ++ AC + H +H + G DD + +ALI YA+CG I L+++ FDKM
Sbjct: 378 TIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKM 437
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ +LVSWN+++K YA+HG+AKE +++F M +PD TF +LSAC+ GL +EG
Sbjct: 438 SALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGW 497
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ ++SM E HG+ P+++HYAC+V LL RVG++ EA +I+EMP EPD+ +W LL SCR
Sbjct: 498 RCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRV 557
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H L E+AA KL LEP + ++ +SNIY G +++ IR+ MK +RK PG S
Sbjct: 558 HNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYS 617
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
WIE+ ++VH +G + HPQ + I +KL++L Q+K GY+P+T+ L D+EE+ KE+ L
Sbjct: 618 WIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQIL 677
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+V ++N ++++KN+RIC DCH +K+ S L G+EI VRD+NR
Sbjct: 678 CGHSEKLAVVLGLLNTSP----GQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNR 733
Query: 575 FHHFKDRICSCNDYW 589
FHHFKD +CSC D+W
Sbjct: 734 FHHFKDGVCSCGDFW 748
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 21/243 (8%)
Query: 126 HALALKFSLDAHVYVANALINMY----SKSCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
HAL L+ +L + + +L++ Y S S + + ++ + S++S+I AF
Sbjct: 23 HALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAF--- 79
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ + L F L + PD +K+CA L +H+
Sbjct: 80 ----------ARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAF 129
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
A GF D+++A++L H Y +C I ++++FD+M D+V W++++ Y+ G +EA
Sbjct: 130 AAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEA 189
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+LF M V+P+ ++ +L+ + G E +F ML G P +C++
Sbjct: 190 KELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLV-QGFWPDGSTVSCVLP 248
Query: 359 LLG 361
+G
Sbjct: 249 AVG 251
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS---LSKQVFDKMTYHDLVSWNSILK 290
A H+LI + DT + +L+ YA S+S LS + + + L S++S++
Sbjct: 18 QARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIH 77
Query: 291 AYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
A+A L FS+++ + PD+ S + +C+ + G ++ H+ G +
Sbjct: 78 AFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQL-HAFAAASGFL 136
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + + + RIL+A KL MP + D V+WS ++ + G
Sbjct: 137 TDSIVASSLTHMYLKCDRILDARKLFDRMP-DRDVVVWSAMIAGYSRLG 184
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/558 (41%), Positives = 333/558 (59%), Gaps = 27/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLF N L+NMY K +L DA LFDEMP+RN +S+ LI GYA+ E LF L
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 101 QYFFPNEFSLASVLISCDYLHG----KLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
+ PN+F+ ASVL +C + G +H +K L + V+V+NAL+++Y+K C +
Sbjct: 132 REVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAK-CGRME 190
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ ++F RN ++WN++I ++ + E+AL LF + +
Sbjct: 191 NSMELFAESPHRNDVTWNTVIVGH-------------VQLGDGEKALRLFLNMLEYRVQA 237
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T+S L+ACA L +HSL K F+ D V+ NALI YA+CGSI ++ VF
Sbjct: 238 TEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVF 297
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQ 331
D M D VSWN+++ Y++HG +EAL++F M V+PD TFV +LSAC++AGL+
Sbjct: 298 DLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLD 357
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G F SM+++HG+ P ++HY CMV LLGR G + +A KLI E+P +P ++W LLG+
Sbjct: 358 QGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C H + L ++A ++ ++EP D V +SN+Y + ++ +RK MK V+K P
Sbjct: 418 CVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEP 477
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
GLSWIE + VH F G HP+ I LE L + K GY+P ++ L D+E+E KE
Sbjct: 478 GLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKE 537
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L+ HSE+LAL F I+ S S IRIMKN+RICVDCH +K S ++ +EIVVRD
Sbjct: 538 RLLWVHSERLALSFGIIRTPS----GSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRD 593
Query: 572 SNRFHHFKDRICSCNDYW 589
NRFHHF++ +CSC DYW
Sbjct: 594 INRFHHFQEGLCSCGDYW 611
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 155/297 (52%), Gaps = 25/297 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ ACA + Q+H H+I D+FV+N L+++YAK G ++++ LF E
Sbjct: 141 FASVLQACATMEGLNLGNQIHCHVIK--IGLHSDVFVSNALMDVYAKCGRMENSMELFAE 198
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HG 122
P RN V+W +I G+ Q G+ E+ RLF ++L+Y E + +S L +C L G
Sbjct: 199 SPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPG 258
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H+L +K + D + V NALI+MY+K +A VF+ M ++ +SWN+MI+ +
Sbjct: 259 LQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMH 318
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
L +A+ +F KM+ E + PD TF VL AC AGL+ + A
Sbjct: 319 GLGREALRIFDKMQETE-------------VKPDKLTFVGVLSACANAGLLDQGQAYFT- 364
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALH 295
S+I +G E ++ R G + + ++ D++ + ++ W ++L A +H
Sbjct: 365 SMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 421
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 175/352 (49%), Gaps = 32/352 (9%)
Query: 83 YAQHGNAEECFRLFCSLLQYFFPNEF---SLASVLISC----DYLHGKLVHALALKFSLD 135
+++ G + + +L + + P+EF + A+ L C + GK +H LK
Sbjct: 11 FSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGC 70
Query: 136 AHVYVANALINMYSKS---CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
++ N L+NMY KS C +A K+F+ M RN IS+ ++I + A+++
Sbjct: 71 LDLFAWNILLNMYVKSDFLC--DASKLFDEMPERNTISFVTLIQGY------AESVRFL- 121
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
EA+ LF +L RE + P+ TF+ VL+ACA + + +H + K G D
Sbjct: 122 ------EAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVF 174
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
++NAL+ YA+CG + S ++F + + + V+WN+++ + G ++AL+LF NM
Sbjct: 175 VSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYR 234
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
VQ T+ S L AC+ ++ G ++ HS+ + ++D+ + G I +A
Sbjct: 235 VQATEVTYSSALRACASLAALEPGLQI-HSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA 293
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFV 420
+L+ ++ + D V W+ ++ HG R A K+++ E D L FV
Sbjct: 294 -RLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFV 344
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/596 (38%), Positives = 355/596 (59%), Gaps = 31/596 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ ++Y +L ACA + ++ A +H H+ + +F+ N LI++Y K G + DAR
Sbjct: 63 TPRLYHSLITACARYRSLDDARAIHAHLAGS--QFAGSVFLDNSLIHLYCKCGAVADARR 120
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVL----ISCD 118
+FD MP R++ SWT+LI+GYAQ+ +E L +L+ F PN F+ AS+L S
Sbjct: 121 VFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASAS 180
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G+ +HAL +K+ VYV +AL++MY++ C D A VF+ +E +N +SWN++IA
Sbjct: 181 SGIGEQIHALTVKYDWHDDVYVGSALLDMYAR-CGRMDMAIAVFDQLESKNGVSWNALIA 239
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F A+ + E L +F ++QR G T+S V A AG+
Sbjct: 240 GF-------------ARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH+ + K G + N ++ YA+ GS+ +++VFD++ D+V+WNS+L A+A +G
Sbjct: 287 WVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYG 346
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+EA+ F M V + TF+S+L+ACSH GLV+EG + F M++ + + P++DHY
Sbjct: 347 LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHY 405
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+VDLLGR G + +A I +MPM+P + +W LLGSCR H ++ + AA + +L+P
Sbjct: 406 VTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDP 465
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
D+ V + NIY +G ++ A +RK MK + V+K P SW+EIEN VH F + HP
Sbjct: 466 DDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHP 525
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ E I+KK EE+ Q++ GYVP T L ++E+ ++ +L +HSEK+AL FA++N
Sbjct: 526 RSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINM--- 582
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRIMKNIRIC DCH+ + S + +EIVVRD+NRFHHF CSC DYW
Sbjct: 583 -PLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/583 (39%), Positives = 343/583 (58%), Gaps = 33/583 (5%)
Query: 35 FPNEPQDLFVT-NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F P+ + V+ N LI Y + G +++A+ LFD+MP RN +SW +I+GYAQ+G +EE
Sbjct: 345 FEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEAL 404
Query: 94 RLFCSLLQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMY 148
L L + P+ SL S+ +C + G VH+LA+K + + NALI MY
Sbjct: 405 GLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMY 464
Query: 149 SKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQA------------------IE 189
K E A +VF M ++++SWNS +AA L +A I
Sbjct: 465 GKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIIS 524
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
+A + EA+ F+ + E P+ +I+L C L + +H++ K G +
Sbjct: 525 AYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDS 584
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ ++ANALI Y +CG S+++FD M D+ +WN+I+ YA HG +EA++++ +M
Sbjct: 585 ELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHME 643
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
V P+ TFV LL+ACSHAGLV EG K F SM +++G+ P +HYACMVDLLGR G +
Sbjct: 644 SAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDV 703
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
AE+ I +MP+EPD+VIWS LLG+C+ H + + AA KL ++EP ++ +V +SNIY
Sbjct: 704 QGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIY 763
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI 486
G + + +RK MK V K PG SW +I++++H F +G K+H Q E I LEEL
Sbjct: 764 SSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELY 823
Query: 487 GQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNI 546
LK GYVP+T LHDI+EE KE L +HSEKLA+ + ++ + I+I+KN+
Sbjct: 824 TLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLAT----PKGMPIQILKNL 879
Query: 547 RICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RIC DCH F+K S + ++I +RD NRFHHF++ CSC D+W
Sbjct: 880 RICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 192/389 (49%), Gaps = 49/389 (12%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
+G+I A +L + M +D+ N ++ Y + DAR+LF++MP+RN+VSWT
Sbjct: 140 NGDITMARRLFDAM------PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWT 193
Query: 78 ALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKL-----VHALALK 131
+ISGY + N + + +FC + + P++ + AS L + L G L + LALK
Sbjct: 194 VMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGL-GNLDVLESLRVLALK 252
Query: 132 FSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
+ V + A++N+YS+ S D A K FE+M RN +W++MIAA AI
Sbjct: 253 TGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIA 312
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV--LKACAGLVTERHASAVHSLIAKYGF 247
++ +R+ + C +++ L C + R ++ +
Sbjct: 313 VY----------------ERDPVKSIACRTALITGLAQCGRIDDAR-------ILFEQIP 349
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E V NALI Y + G ++ +K++FDKM + + +SW ++ YA +G+++EAL L
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLLGR 362
+ + P ++ S+ ACS+ ++ G +V HS+ G Q + +AC ++ + G+
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQV-HSLAVKVGC--QFNSFACNALITMYGK 466
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ A ++ M + D V W+ L +
Sbjct: 467 CRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 175/365 (47%), Gaps = 27/365 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +I+ Y G D AR L+D + N+ + L+SGY + G E R+F +
Sbjct: 63 RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGM 122
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH-VYVANALINMYSKSCA-DEAW 157
L+ N + + +ISC +G + A L ++ + V N+++ Y S +A
Sbjct: 123 LER---NTVAW-NAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDAR 178
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+FE M RN++SW MI+ + +++N +A +F ++ REG+ PD
Sbjct: 179 NLFEKMPERNLVSWTVMISGY-------------GRIENHGKAWDIFCKMHREGLLPDQS 225
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI-SLSKQVFDK 276
F+ L A GL ++ L K GFE D VI A+++ Y+R S+ + + F+
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKV 336
M + +W++++ A + G+ A+ ++ V+ A +L++ + G + + +
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVK-SIACRTALITGLAQCGRIDDARIL 344
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F + E P + + ++ + G + EA++L +MP +++ W+ ++ ++G
Sbjct: 345 FEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAGYAQNG 398
Query: 397 ETRLA 401
+ A
Sbjct: 399 RSEEA 403
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDS 314
+A I R G + +++VFD M D+++WNS++ AY +G A L+ ++ +
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS-GGNM 96
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T LLS G V E +VF MLE + V + M+ + G I A +L
Sbjct: 97 RTGAILLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARRLFD 151
Query: 375 EMPMEPDSVIWSVLLGSC 392
MP S S+L G C
Sbjct: 152 AMPSRDVSSWNSMLTGYC 169
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/567 (41%), Positives = 337/567 (59%), Gaps = 35/567 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV++ LI+MY+K G L DAR LFDE+P RNVVSWT++I+GY Q+ A+ LF L
Sbjct: 1176 DLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFL 1235
Query: 101 Q--------YFFP-NEFSLASVLISCDYLHGKL----VHALALKFSLDAHVYVANALINM 147
+ P + + SVL +C + GK VH +K D + V N L++
Sbjct: 1236 EEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDA 1295
Query: 148 YSKSCADE--AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
Y+K C + KVF+ ME ++ ISWNSMIA + L +A+E+F M
Sbjct: 1296 YAK-CGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM----------- 1343
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
++ G+ + T S VL ACA R +H + K E + + ++I Y +CG
Sbjct: 1344 -VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 1402
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+ ++K+ FD+M ++ SW +++ Y +HG+AKEAL +F M V+P+ TFVS+L+
Sbjct: 1403 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 1462
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACSHAGLV+EG F++M + + P ++HY CMVDL GR G + EA LI+ M M+PD
Sbjct: 1463 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 1522
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
V+W LLG+CR H L E+AA KL +L+P + +V +SN+Y +G + +R M
Sbjct: 1523 VVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLM 1582
Query: 443 KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL 502
K ++ K PG S +E++ RVH F G K HP E I+K LE+L +L+ +GYVP + L
Sbjct: 1583 KNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVL 1642
Query: 503 HDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDL 562
HD++EE KE L HSEKLA+ F +MN + I I+KN+R+C DCH +KL S L
Sbjct: 1643 HDVDEEEKEIILRVHSEKLAVAFGVMNSA----PGTTINIIKNLRVCGDCHTVIKLISKL 1698
Query: 563 LGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ ++ VVRDS RFHHFKD +CSC DYW
Sbjct: 1699 VHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 196/385 (50%), Gaps = 31/385 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N K Q+H +I + D +T LI++Y+ G + A LF ++ +W +
Sbjct: 39 NFKHLRQIHAKIIRS--GLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLI 96
Query: 80 ISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC-DYLH---GKLVHALALKFSL 134
I +G +E+ L+ +++ Q ++F+ V+ +C ++L GK+VH +K+
Sbjct: 97 IRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF 156
Query: 135 DAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
V+V N LI+ Y K C A KVFE M RNV+SW ++I+ +C +A +F
Sbjct: 157 SGDVFVQNNLIDFYFK-CGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 193 KMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
++ ++ EEAL LF+++Q E + P+ T ++KAC +
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H K E + ALI Y++CGSI + +VF+ M L +WNS++ + +
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG +EAL LFS M NV+PD+ TF+ +L AC H V+EG F M +++G+ P +
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 352 HYACMVDLLGRVGRILEAEKLIREM 376
HY CM +L R + EA K +E+
Sbjct: 396 HYECMTELYARSNNLDEAFKSTKEV 420
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 177/357 (49%), Gaps = 29/357 (8%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC-- 117
A + + K NV SW ++I+ A+ G++ E R F SL + P S + SC
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
D + G++ H A F + ++V++ALI+MYSK C +A +F+ + RNV+SW S
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSK-CGQLKDARALFDEIPLRNVVSWTS 1213
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP-DWCTFSIVLKACAGLVTE 232
MI + + A+ LF EE +++ P D VL AC+ + +
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEET------EVEDGNNVPLDSVVMVSVLSACSRVSGK 1267
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH + K GF+ + N L+ AYA+CG +SK+VFD M D +SWNS++ Y
Sbjct: 1268 GITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVY 1327
Query: 293 ALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
A G + EAL++F M V+ ++ T ++L AC+HAG ++ G K H + +
Sbjct: 1328 AQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG-KCIHDQV----IKM 1382
Query: 349 QLDHYAC----MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
L++ C ++D+ + GR+ A+K M E + W+ ++ HG + A
Sbjct: 1383 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM-KEKNVKSWTAMVAGYGMHGRAKEA 1438
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 138/317 (43%), Gaps = 56/317 (17%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRN--VISWNSMI 175
++ H + +HA ++ L + LI++YS A+ + + +N +WN +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTH-GRIAYAILLFYQIQNPCTFTWNLII 97
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A L E+AL L++ + +G+A D TF V+KAC ++
Sbjct: 98 RANTINGLS-------------EQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG 144
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK----- 290
VH + KYGF D + N LI Y +CG + +VF+KM ++VSW +++
Sbjct: 145 KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISC 204
Query: 291 --------------------------AYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
Y + Q +EAL+LF M N+ P+ T VSL+
Sbjct: 205 GDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 264
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPME 379
AC+ G++ G + ++N ++ Y ++D+ + G I +A ++ MP +
Sbjct: 265 KACTEMGILTLGRGIHDYAIKN---CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
Query: 380 PDSVIWSVLLGSCRKHG 396
W+ ++ S HG
Sbjct: 322 SLPT-WNSMITSLGVHG 337
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/583 (39%), Positives = 343/583 (58%), Gaps = 33/583 (5%)
Query: 35 FPNEPQDLFVT-NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F P+ + V+ N LI Y + G +++A+ LFD+MP RN +SW +I+GYAQ+G +EE
Sbjct: 345 FEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEAL 404
Query: 94 RLFCSLLQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMY 148
L L + P+ SL S+ +C + G VH+LA+K + + NALI MY
Sbjct: 405 GLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMY 464
Query: 149 SKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQA------------------IE 189
K E A +VF M ++++SWNS +AA L +A I
Sbjct: 465 GKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIIS 524
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
+A + EA+ F+ + E P+ +I+L C L + +H++ K G +
Sbjct: 525 AYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDS 584
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ ++ANALI Y +CG S+++FD M D+ +WN+I+ YA HG +EA++++ +M
Sbjct: 585 ELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHME 643
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
V P+ TFV LL+ACSHAGLV EG K F SM +++G+ P +HYACMVDLLGR G +
Sbjct: 644 SAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDV 703
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
AE+ I +MP+EPD+VIWS LLG+C+ H + + AA KL ++EP ++ +V +SNIY
Sbjct: 704 QGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIY 763
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI 486
G + + +RK MK V K PG SW +I++++H F +G K+H Q E I LEEL
Sbjct: 764 SSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELY 823
Query: 487 GQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNI 546
LK GYVP+T LHDI+EE KE L +HSEKLA+ + ++ + I+I+KN+
Sbjct: 824 TLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLAT----PKGMPIQILKNL 879
Query: 547 RICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RIC DCH F+K S + ++I +RD NRFHHF++ CSC D+W
Sbjct: 880 RICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 192/389 (49%), Gaps = 49/389 (12%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
+G+I A +L + M +D+ N ++ Y + DAR+LF++MP+RN+VSWT
Sbjct: 140 NGDITMARRLFDAM------PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWT 193
Query: 78 ALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKL-----VHALALK 131
+ISGY + N + + +FC + + P++ + AS L + L G L + LALK
Sbjct: 194 VMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGL-GNLDVLESLRVLALK 252
Query: 132 FSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
+ V + A++N+YS+ S D A K FE+M RN +W++MIAA AI
Sbjct: 253 TGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIA 312
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV--LKACAGLVTERHASAVHSLIAKYGF 247
++ +R+ + C +++ L C + R ++ +
Sbjct: 313 VY----------------ERDPVKSIACRTALITGLAQCGRIDDAR-------ILFEQIP 349
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E V NALI Y + G ++ +K++FDKM + + +SW ++ YA +G+++EAL L
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLLGR 362
+ + P ++ S+ ACS+ ++ G +V HS+ G Q + +AC ++ + G+
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQV-HSLAVKVGC--QFNSFACNALITMYGK 466
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ A ++ M + D V W+ L +
Sbjct: 467 CRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 175/365 (47%), Gaps = 27/365 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +I+ Y G D AR L+D + N+ + L+SGY + G E R+F +
Sbjct: 63 RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGM 122
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH-VYVANALINMYSKSCA-DEAW 157
L+ N + + +ISC +G + A L ++ + V N+++ Y S +A
Sbjct: 123 LER---NTVAW-NAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDAR 178
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+FE M RN++SW MI+ + +++N +A +F ++ REG+ PD
Sbjct: 179 NLFEKMPERNLVSWTVMISGY-------------GRIENHGKAWDIFCKMHREGLLPDQS 225
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI-SLSKQVFDK 276
F+ L A GL ++ L K GFE D VI A+++ Y+R S+ + + F+
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKV 336
M + +W++++ A + G+ A+ ++ V+ A +L++ + G + + +
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVK-SIACRTALITGLAQCGRIDDARIL 344
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F + E P + + ++ + G + EA++L +MP +++ W+ ++ ++G
Sbjct: 345 FEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAGYAQNG 398
Query: 397 ETRLA 401
+ A
Sbjct: 399 RSEEA 403
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDS 314
+A I R G + +++VFD M D+++WNS++ AY +G A L+ ++ +
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS-GGNM 96
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T LLS G V E +VF MLE + V + M+ + G I A +L
Sbjct: 97 RTGAILLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARRLFD 151
Query: 375 EMPMEPDSVIWSVLLGSC 392
MP S S+L G C
Sbjct: 152 AMPSRDVSSWNSMLTGYC 169
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/599 (38%), Positives = 350/599 (58%), Gaps = 31/599 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ + Y +L + G + ++H+H + DL V + ++MY + G +DD
Sbjct: 331 FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVE--VGLVSDLRVGSAFVHMYIRCGSIDD 388
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVL---IS 116
A+ +FD++ RNV +W A+I G AQ E LF + + FFP+ + ++L +
Sbjct: 389 AQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVG 448
Query: 117 CDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADEAW--KVFENMEFRNVISWNS 173
+ L K VH+ A+ L + V NAL++MY+K C + + +VF++M RNV +W
Sbjct: 449 EEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAK-CGNTMYAKQVFDDMVERNVTTWTV 506
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI+ A+ EA LF Q+ REG+ PD T+ +L ACA
Sbjct: 507 MISGL-------------AQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VHS G D + NAL+H YA+CGS+ +++VFD M D+ SW ++ A
Sbjct: 554 WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLA 613
Query: 294 LHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG+ +AL LF M ++ P+ +FV++LSACSHAGLV EG + F S+ +++G+ P +
Sbjct: 614 QHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTM 673
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HY CMVDLLGR G++ EA+ I MP+EP W LLG+C +G +AE AA + +
Sbjct: 674 EHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLK 733
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
L+P + +V +SNIY +G++ + L+R M+ +RK PG SWIE++N++H F G
Sbjct: 734 LKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDT 793
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP+ + I+ KL++LI +LK GYVP+T L L + ++E+KE+ L HSEKLA+V+ +M+
Sbjct: 794 SHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMH- 852
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ IR+ KN+R+C DCH K S + G+EIV RD+ RFHHFKD +CSC DYW
Sbjct: 853 ---TPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 216/431 (50%), Gaps = 37/431 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ AC ++K ++H H+I + D+ V L+NMY K G +DDA+ +FD+
Sbjct: 33 YLSILKACCSPVSLKWGKKIHAHIIQS--GFQSDVRVETALVNMYVKCGSIDDAQLIFDK 90
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKL-- 124
M +RNV+SWT +I G A +G +E F F + + F PN ++ S+L + + G L
Sbjct: 91 MVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSIL-NANASAGALEW 149
Query: 125 ---VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
VH+ A+ L + V NAL++MY+KS + D+A VF+ M R++ SW MI
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGG--- 206
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA----S 236
A+ +EA LF Q++R G P+ T+ +L A A +T A
Sbjct: 207 ----------LAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASA--ITSTGALEWVK 254
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH K GF D + NALIH YA+CGSI ++ VFD M D++SWN+++ A +G
Sbjct: 255 EVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNG 314
Query: 297 QAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
EA +F M + PDS T++SLL+ G E K H G+V L
Sbjct: 315 CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG-AWEWVKEVHKHAVEVGLVSDLRVG 373
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC--RKHGETRLAELAATKLKQL 411
+ V + R G I +A+ + ++ + + W+ ++G +K G L+ + +
Sbjct: 374 SAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVAQQKCGREALSLFLQMRREGF 432
Query: 412 EPGDSLGFVQM 422
P D+ FV +
Sbjct: 433 FP-DATTFVNI 442
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 205/407 (50%), Gaps = 29/407 (7%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ ++ Y ++ +A A G ++ ++H H +N DL V N L++MYAK G +DD
Sbjct: 127 FIPNSYTYVSILNANASAGALEWVKEVHSHAVN--AGLALDLRVGNALVHMYAKSGSIDD 184
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSL-----ASVL 114
AR +FD M +R++ SWT +I G AQHG +E F LF + + PN + AS +
Sbjct: 185 ARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAI 244
Query: 115 ISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWN 172
S L K VH A K + + V NALI+MY+K D+A VF+ M R+VISWN
Sbjct: 245 TSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 304
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+MI A+ EA +F ++Q+EG PD T+ +L
Sbjct: 305 AMIGGL-------------AQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAW 351
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH + G D + +A +H Y RCGSI ++ +FDK+ ++ +WN+++
Sbjct: 352 EWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGV 411
Query: 293 ALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
A +EAL LF M + PD+ TFV++LSA + E K HS + G+V
Sbjct: 412 AQQKCGREALSLFLQMRREGFFPDATTFVNILSA-NVGEEALEWVKEVHSYAIDAGLV-D 469
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
L +V + + G + A+++ +M +E + W+V++ +HG
Sbjct: 470 LRVGNALVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMISGLAQHG 515
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 177/375 (47%), Gaps = 29/375 (7%)
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFS 133
+I GYA++G AE+ +++ + + PNE + S+L +C GK +HA ++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ V V AL+NMY K D+A +F+ M RNVISW MI A
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGG-------------LA 107
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+EA F Q+QREG P+ T+ +L A A VHS G D
Sbjct: 108 HYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLR 167
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ NAL+H YA+ GSI ++ VFD M D+ SW ++ A HG+ +EA LF M
Sbjct: 168 VGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGG 227
Query: 310 VQPDSATFVSLL--SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
P+ T++S+L SA + G + E K H G + L ++ + + G I
Sbjct: 228 CLPNLTTYLSILNASAITSTGAL-EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSID 286
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNI 425
+A +L+ + + D + W+ ++G ++G A K++Q P DS ++ + N
Sbjct: 287 DA-RLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVP-DSTTYLSLLNT 344
Query: 426 YCLSGSFNKARLIRK 440
+ +G++ + + K
Sbjct: 345 HVSTGAWEWVKEVHK 359
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/567 (41%), Positives = 336/567 (59%), Gaps = 35/567 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV++ LI+MY+K G L DAR LFDE+P RNVVSWT++I+GY Q+ A+ LF L
Sbjct: 2049 DLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFL 2108
Query: 101 QYFFPNE---------FSLASVLISCDYLHGKL----VHALALKFSLDAHVYVANALINM 147
+ E + SVL +C + GK VH +K D + V N L++
Sbjct: 2109 EEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDA 2168
Query: 148 YSKSCADE--AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
Y+K C + KVF+ ME ++ ISWNSMIA + L +A+E+F M
Sbjct: 2169 YAK-CGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM----------- 2216
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
++ G+ + T S VL ACA R +H + K E + + ++I Y +CG
Sbjct: 2217 -VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 2275
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+ ++K+ FD+M ++ SW +++ Y +HG+AKEAL +F M V+P+ TFVS+L+
Sbjct: 2276 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 2335
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACSHAGLV+EG F++M + + P ++HY CMVDL GR G + EA LI+ M M+PD
Sbjct: 2336 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 2395
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
V+W LLG+CR H L E+AA KL +L+P + +V +SN+Y +G + +R M
Sbjct: 2396 VVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLM 2455
Query: 443 KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL 502
K ++ K PG S +E++ RVH F G K HP E I+K LE+L +L+ +GYVP + L
Sbjct: 2456 KNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVL 2515
Query: 503 HDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDL 562
HD++EE KE L HSEKLA+ F +MN + I I+KN+R+C DCH +KL S L
Sbjct: 2516 HDVDEEEKEIILRVHSEKLAVAFGVMNSAP----GTTINIIKNLRVCGDCHTVIKLISKL 2571
Query: 563 LGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ ++ VVRDS RFHHFKD +CSC DYW
Sbjct: 2572 VHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 196/385 (50%), Gaps = 31/385 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N K Q+H +I + D +T LI++Y+ G + A LF ++ +W +
Sbjct: 39 NFKHLRQIHAKIIRS--GLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLI 96
Query: 80 ISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC-DYLH---GKLVHALALKFSL 134
I +G +E+ L+ +++ Q ++F+ V+ +C ++L GK+VH +K+
Sbjct: 97 IRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF 156
Query: 135 DAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
V+V N LI+ Y K C A KVFE M RNV+SW ++I+ +C +A +F
Sbjct: 157 SGDVFVQNNLIDFYFK-CGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 193 KMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
++ ++ EEAL LF+++Q E + P+ T ++KAC +
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H K E + ALI Y++CGSI + +VF+ M L +WNS++ + +
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG +EAL LFS M NV+PD+ TF+ +L AC H V+EG F M +++G+ P +
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 352 HYACMVDLLGRVGRILEAEKLIREM 376
HY CM +L R + EA K +E+
Sbjct: 396 HYECMTELYARSNNLDEAFKSTKEV 420
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 177/357 (49%), Gaps = 29/357 (8%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC-- 117
A + + K NV SW ++I+ A+ G++ E R F SL + P S + SC
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
D + G++ H A F + ++V++ALI+MYSK C +A +F+ + RNV+SW S
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSK-CGQLKDARALFDEIPLRNVVSWTS 2086
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP-DWCTFSIVLKACAGLVTE 232
MI + + A+ LF EE +++ P D VL AC+ + +
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEET------EVEDGNNVPLDSVVMVSVLSACSRVSGK 2140
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH + K GF+ + N L+ AYA+CG +SK+VFD M D +SWNS++ Y
Sbjct: 2141 GITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVY 2200
Query: 293 ALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
A G + EAL++F M V+ ++ T ++L AC+HAG ++ G K H + +
Sbjct: 2201 AQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG-KCIHDQV----IKM 2255
Query: 349 QLDHYAC----MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
L++ C ++D+ + GR+ A+K M E + W+ ++ HG + A
Sbjct: 2256 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEA 2311
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 139/317 (43%), Gaps = 56/317 (17%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRN--VISWNSMI 175
++ H + +HA ++ L + LI++YS + A+ + + +N +WN +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYS-THGRIAYAILLFYQIQNPCTFTWNLII 97
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A L E+AL L++ + +G+A D TF V+KAC ++
Sbjct: 98 RANTINGLS-------------EQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG 144
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI------- 288
VH + KYGF D + N LI Y +CG + +VF+KM ++VSW ++
Sbjct: 145 KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISC 204
Query: 289 ------------------------LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
+ Y + Q +EAL+LF M N+ P+ T VSL+
Sbjct: 205 GDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 264
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPME 379
AC+ G++ G + ++N ++ Y ++D+ + G I +A ++ MP +
Sbjct: 265 KACTEMGILTLGRGIHDYAIKN---CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
Query: 380 PDSVIWSVLLGSCRKHG 396
W+ ++ S HG
Sbjct: 322 SLPT-WNSMITSLGVHG 337
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/592 (39%), Positives = 349/592 (58%), Gaps = 31/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC+ +K+ Q+ +H+I D V L++MYAK G L DA +F++
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIE--AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC---DYLH-G 122
+ K+NVV+W A+I+ Y QH + F +LL+ PN + S+L C D L G
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K VH L +K L++ ++V+NAL++M+ +C D A +F +M R+++SWN++IA F
Sbjct: 534 KWVHFLIMKAGLESDLHVSNALVSMFV-NCGDLMSAKNLFNDMPKRDLVSWNTIIAGF-- 590
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + A F+ +Q G+ PD TF+ +L ACA +H+
Sbjct: 591 -----------VQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
LI + F+ D ++ LI Y +CGSI + QVF K+ ++ SW S++ YA HG+ KE
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKE 699
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M V+PD TFV LSAC+HAGL++EG F SM E + P+++HY CMV
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMV 758
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DL GR G + EA + I +M +EPDS +W LLG+C+ H LAE AA K +L+P D+
Sbjct: 759 DLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNG 818
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
FV +SNIY +G + + +RK M V K PG SWIE++ +VH F S K HPQ E
Sbjct: 819 VFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEE 878
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +LE L +++ +GYVP+T LHD+E+ KE+ L++HSE+LA+ + ++ L
Sbjct: 879 IHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPL---- 934
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I I KN+R+C DCH K S + ++I+ RDSNRFHHFKD +CSC D+W
Sbjct: 935 TPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 218/409 (53%), Gaps = 34/409 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ + ++ +ACA N+ + +L+ ++ DLFV LINM+ K G + DA +F
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILK--AGWDTDLFVGTALINMHIKCGDIGDATKVF 269
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-----FPNEFSLASVLISCDYL 120
D +P R++V+WT++I+G A+HG F+ C+L Q P++ + S+L +C++
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGR----FKQACNLFQRMEEEGVQPDKVAFVSLLRACNHP 325
Query: 121 ----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
GK VHA + D +YV A+++MY+K ++A +VF+ ++ RNV+SW +MI
Sbjct: 326 EALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A F A+ +EA F ++ G+ P+ TF +L AC+ +
Sbjct: 386 AGF-------------AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+ I + G+ D + AL+ YA+CGS+ + +VF+K++ ++V+WN+++ AY H
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH 492
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
Q AL F + ++P+S+TF S+L+ C + ++ G K H ++ G+ L
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHV 551
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+V + G ++ A+ L +MP + D V W+ ++ +HG+ ++A
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 231/446 (51%), Gaps = 33/446 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y+ L C N+ +++ H I +P D+F+ N LINMYAK G A+ +F
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNH-IKKSGVQP-DIFMWNTLINMYAKCGNTISAKQIF 168
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----DYL 120
D+M +++V SW L+ GY QHG EE F+L ++Q P++ + S+L +C +
Sbjct: 169 DDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVD 228
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G+ ++ L LK D ++V ALINM+ K C D +A KVF+N+ R++++W SMI
Sbjct: 229 KGRELYNLILKAGWDTDLFVGTALINMHIK-CGDIGDATKVFDNLPTRDLVTWTSMITG- 286
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ ++A LF++++ EG+ PD F +L+AC V
Sbjct: 287 ------------LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKV 334
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + + G++ + + A++ Y +CGS+ + +VFD + ++VSW +++ +A HG+
Sbjct: 335 HARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE-NHGVVPQLDHYA 354
EA F+ M ++P+ TF+S+L ACS ++ G ++ ++E +G ++
Sbjct: 395 DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV--RT 452
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLE 412
++ + + G + +A ++ ++ + + V W+ ++ + +H + LA A + ++
Sbjct: 453 ALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLI 438
P S F + N+ S S + +
Sbjct: 512 PNSST-FTSILNVCKSSDSLELGKWV 536
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/592 (39%), Positives = 349/592 (58%), Gaps = 31/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC+ +K+ Q+ +H+I D V L++MYAK G L DA +F++
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIE--AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC---DYLH-G 122
+ K+NVV+W A+I+ Y QH + F +LL+ PN + S+L C D L G
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K VH L +K L++ ++V+NAL++M+ +C D A +F +M R+++SWN++IA F
Sbjct: 534 KWVHFLIMKAGLESDLHVSNALVSMFV-NCGDLMSAKNLFNDMPKRDLVSWNTIIAGF-- 590
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + A F+ +Q G+ PD TF+ +L ACA +H+
Sbjct: 591 -----------VQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
LI + F+ D ++ LI Y +CGSI + QVF K+ ++ SW S++ YA HG+ KE
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKE 699
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M V+PD TFV LSAC+HAGL++EG F SM E + P+++HY CMV
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMV 758
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DL GR G + EA + I +M +EPDS +W LLG+C+ H LAE AA K +L+P D+
Sbjct: 759 DLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNG 818
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
FV +SNIY +G + + +RK M V K PG SWIE++ +VH F S K HPQ E
Sbjct: 819 VFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEE 878
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +LE L +++ +GYVP+T LHD+E+ KE+ L++HSE+LA+ + ++ L
Sbjct: 879 IHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPL---- 934
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I I KN+R+C DCH K S + ++I+ RDSNRFHHFKD +CSC D+W
Sbjct: 935 TPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 218/409 (53%), Gaps = 34/409 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ + ++ +ACA N+ + +L+ ++ DLFV LINM+ K G + DA +F
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILK--AGWDTDLFVGTALINMHIKCGDIGDATKVF 269
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-----FPNEFSLASVLISCDYL 120
D +P R++V+WT++I+G A+HG F+ C+L Q P++ + S+L +C++
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGR----FKQACNLFQRMEEEGVQPDKVAFVSLLRACNHP 325
Query: 121 ----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
GK VHA + D +YV A+++MY+K ++A +VF+ ++ RNV+SW +MI
Sbjct: 326 EALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A F A+ +EA F ++ G+ P+ TF +L AC+ +
Sbjct: 386 AGF-------------AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+ I + G+ D + AL+ YA+CGS+ + +VF+K++ ++V+WN+++ AY H
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH 492
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
Q AL F + ++P+S+TF S+L+ C + ++ G K H ++ G+ L
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHV 551
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+V + G ++ A+ L +MP + D V W+ ++ +HG+ ++A
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 231/446 (51%), Gaps = 33/446 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y+ L C N+ +++ H I +P D+F+ N LINMYAK G A+ +F
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNH-IKKSGVQP-DIFMRNTLINMYAKCGNTISAKQIF 168
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----DYL 120
D+M +++V SW L+ GY QHG EE F+L ++Q P++ + S+L +C +
Sbjct: 169 DDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVD 228
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G+ ++ L LK D ++V ALINM+ K C D +A KVF+N+ R++++W SMI
Sbjct: 229 KGRELYNLILKAGWDTDLFVGTALINMHIK-CGDIGDATKVFDNLPTRDLVTWTSMITG- 286
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ ++A LF++++ EG+ PD F +L+AC V
Sbjct: 287 ------------LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKV 334
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + + G++ + + A++ Y +CGS+ + +VFD + ++VSW +++ +A HG+
Sbjct: 335 HARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE-NHGVVPQLDHYA 354
EA F+ M ++P+ TF+S+L ACS ++ G ++ ++E +G ++
Sbjct: 395 DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV--RT 452
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLE 412
++ + + G + +A ++ ++ + + V W+ ++ + +H + LA A + ++
Sbjct: 453 ALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLI 438
P S F + N+ S S + +
Sbjct: 512 PNSST-FTSILNVCKSSDSLELGKWV 536
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/616 (37%), Positives = 358/616 (58%), Gaps = 55/616 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y + + C ++ ++H HMI P+ +F+ LI +Y K L DA ++F
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPS----VFLRTRLIVLYTKCDSLGDAHNVF 301
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--------------------- 104
DEMP+RNVVSWTA+IS Y+Q G A + LF + ++
Sbjct: 302 DEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCT 361
Query: 105 -PNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWK 158
PNEF+ A+VL SC ++ G+ +H+L +K + + HV+V ++L++MY+K EA
Sbjct: 362 EPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEART 421
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
VFE + R+V+S ++I+ +A++ +EEAL LFR+LQ EGM ++ T
Sbjct: 422 VFECLPERDVVSCTAIISG-------------YAQLGLDEEALELFRRLQGEGMKSNYVT 468
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
++ VL A +GL VH+ + + V+ N+LI Y++CG+++ S+++FD M
Sbjct: 469 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 528
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGN 334
++SWN++L Y+ HG+ +E L+LF+ M V+PDS T +++LS CSH GL +G
Sbjct: 529 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 588
Query: 335 KVFHSMLENH-GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+F+ M V P+++HY C+VDLLGR GR+ EA + I++MP EP + IW LLG+CR
Sbjct: 589 NIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 648
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H + E A +L ++EPG++ +V +SN+Y +G + +R M V K PG
Sbjct: 649 VHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGR 708
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S IE++ +H F + + HP+RE I K++EL K +GYVP+ S LHD++EE KE+
Sbjct: 709 SSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKI 768
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLAL F ++ + IR++KN+RICVDCHNF K S + G+E+ +RD N
Sbjct: 769 LLGHSEKLALSFGLIASPA----SVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKN 824
Query: 574 RFHHFKDRICSCNDYW 589
RFH CSC DYW
Sbjct: 825 RFHRIVGGKCSCEDYW 840
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 35/201 (17%)
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
Q+ G + ++ +L C R VH+ + K + + LI Y +C
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF-------------------S 306
S+ + VFD+M ++VSW +++ AY+ G A +AL LF S
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352
Query: 307 NMN-----VQPDSATFVSLLSACSHAGLVQEGNKVFHSML-----ENHGVVPQLDHYACM 356
N N +P+ TF ++L++C+ + G ++ HS++ E+H V + +
Sbjct: 353 NPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQI-HSLIIKLNYEDHVFVG-----SSL 406
Query: 357 VDLLGRVGRILEAEKLIREMP 377
+D+ + G+I EA + +P
Sbjct: 407 LDMYAKDGKIHEARTVFECLP 427
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/556 (40%), Positives = 339/556 (60%), Gaps = 27/556 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ ++I+ Y + G L +AR LFDEMP+RNV+SWT +ISGY Q+G + +LF +
Sbjct: 169 KDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM 228
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMYSKSC-ADEAW 157
+ NE S ++L+ G++ A L ++ VA NA+I + ++ +A
Sbjct: 229 PE---KNEVSWTAMLMGYTQ-GGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKAR 284
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+VF+ + ++ +W++MI + E +A+ LFA M QREG+ ++
Sbjct: 285 QVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALM-------------QREGVQSNFP 331
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+ VL CA L + H VH+ + K F+ D +A+ LI Y +CG + ++Q+FD+
Sbjct: 332 SLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRF 391
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ D+V WNSI+ YA HG +EALQ+F M + D TFV +LSACS+ G V+EG
Sbjct: 392 SPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGL 451
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F SM + V P+ +HYACMVDLLGR G + +A LI++MP+E D++IW LLG+CR
Sbjct: 452 EIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRT 511
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H LAE+AA KL QLEP ++ ++ +SNIY G + +R+ M+ +V K PG S
Sbjct: 512 HMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCS 571
Query: 455 WIEIENRVHEFASG-GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
WIE+E RVH F G +HP+ +I K LE+L G L+ GY P++S LHD++EE K
Sbjct: 572 WIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRS 631
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HHSE+LA+ F ++ E IR+MKN+R+C DCH+ +KL + + G+EI++RD+N
Sbjct: 632 LGHHSERLAVAFGLLK----VPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDAN 687
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFKD CSC DYW
Sbjct: 688 RFHHFKDGFCSCRDYW 703
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 171/380 (45%), Gaps = 45/380 (11%)
Query: 33 NNFPNEPQDLFVT---------NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
NN P E + LF N LI+ Y K + +AR FD MP+RNVVSWTA++ GY
Sbjct: 60 NNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGY 119
Query: 84 AQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANA 143
Q G E LF + P + ++ ++ + + + F + V A
Sbjct: 120 VQEGLVSEAETLFWQM-----PEKNVVSWTVMLGGLIQVRRIDEARGLFDI-MPVKDVVA 173
Query: 144 LINMYSKSCAD----EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
NM S C + EA ++F+ M RNVISW +MI+ + A +LF M + E
Sbjct: 174 RTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNE 233
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
W ++++ G E + ++ K V NA+I
Sbjct: 234 V--------------SWT--AMLMGYTQGGRIEEASELFDAMPVKA-----VVACNAMIL 272
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
+ + G ++ ++QVFD++ D +W++++K Y G EAL LF+ M VQ + +
Sbjct: 273 GFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPS 332
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
+S+LS C+ + G +V H+ L + + ++ + + G +++A ++
Sbjct: 333 LISVLSVCASLASLDHGRQV-HAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRF 391
Query: 377 PMEPDSVIWSVLLGSCRKHG 396
+ D V+W+ ++ +HG
Sbjct: 392 SPK-DIVMWNSIITGYAQHG 410
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 157/354 (44%), Gaps = 67/354 (18%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP 105
N I YA+ G ++ AR +FDEMP + +VSW ++++GY Q+ E LF + P
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM-----P 74
Query: 106 NEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENME 164
+++ N LI+ Y K+ EA K F+ M
Sbjct: 75 ERNTVS-----------------------------WNGLISGYVKNRMVSEARKAFDTMP 105
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
RNV+SW +M+ + L ++A LF +M + + +++++L
Sbjct: 106 ERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEK-----------------NVVSWTVML- 147
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
GL+ R L + D V +I Y + G ++ ++++FD+M +++S
Sbjct: 148 --GGLIQVRRIDEARGLFDIMPVK-DVVARTNMISGYCQEGRLAEARELFDEMPRRNVIS 204
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
W +++ Y +GQ A +LF M + + ++ ++L + G ++E +++F +M
Sbjct: 205 WTTMISGYVQNGQVDVARKLFEVMP-EKNEVSWTAMLMGYTQGGRIEEASELFDAM---- 259
Query: 345 GVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
P AC M+ G+ G + +A ++ ++ E D WS ++ + G
Sbjct: 260 ---PVKAVVACNAMILGFGQNGEVAKARQVFDQI-REKDDGTWSAMIKVYERKG 309
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNH---LINMYAKFGYLDDARHL 64
+ + AC+ G +K+ +++ E M + + EP+ T H ++++ + G ++DA L
Sbjct: 434 FVGVLSACSYTGKVKEGLEIFESMKSKYLVEPK----TEHYACMVDLLGRAGLVNDAMDL 489
Query: 65 FDEMP-KRNVVSWTALISGYAQHGN 88
+MP + + + W AL+ H N
Sbjct: 490 IQKMPVEADAIIWGALLGACRTHMN 514
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/584 (39%), Positives = 356/584 (60%), Gaps = 29/584 (4%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ Y TL C + + Q +H H++ + D+ + N L+NMYAK G L++AR +F
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIFR--HDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH--- 121
++MP+R+ V+WT LISGY+QH + F +L++ + PNEF+L+SV+ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G +H +K D++V+V +AL+++Y++ D+A VF+ +E RN +SWN++IA
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH- 237
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+ E+AL LF+ + R+G P +++ + AC+ VH
Sbjct: 238 ------------ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVH 285
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K G + N L+ YA+ GSI ++++FD++ D+VSWNS+L AYA HG K
Sbjct: 286 AYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGK 345
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ F M ++P+ +F+S+L+ACSH+GL+ EG ++ +++ G+VP+ HY +
Sbjct: 346 EAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTV 404
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + A + I EMP+EP + IW LL +CR H T L AA + +L+P D
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 464
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V + NIY G +N A +RK+MK S V+K P SW+EIEN +H F + +RHPQRE
Sbjct: 465 GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQRE 524
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I +K EE++ ++K +GYVP+TS + ++++ +E L +HSEK+AL FA++N
Sbjct: 525 EIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPP---- 580
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
S I I KNIR+C DCH +KLAS ++G+EI+VRD+NRFHHFKD
Sbjct: 581 GSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 335/561 (59%), Gaps = 29/561 (5%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
EP+ V L+ MYAK G + A+ +FD++P++NVV+WT LI+GYAQ G + L
Sbjct: 231 EPR---VGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLE 287
Query: 98 SLLQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+ Q PN+ + S+L C HGK VH ++ ++V NALI MY K
Sbjct: 288 KMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCG 347
Query: 153 A-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
EA K+F ++ R+V++W +M+ + A++ +EA+ LFR++Q++G
Sbjct: 348 GLKEARKLFGDLPHRDVVTWTAMVTGY-------------AQLGFHDEAIDLFRRMQQQG 394
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ PD TF+ L +C+ + ++H + G+ D + +AL+ YA+CGS+ ++
Sbjct: 395 IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDAR 454
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
VF++M+ ++V+W +++ A HG+ +EAL+ F M ++PD TF S+LSAC+H G
Sbjct: 455 LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV+EG K F SM ++G+ P ++HY+C VDLLGR G + EAE +I MP +P +W L
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +CR H + E AA + +L+P D +V +SNIY +G + A +R+ M+ V
Sbjct: 575 LSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PG SWIE++ +VH F K HP+ + I+ +L +L Q+K GYVP+T LHD++EE
Sbjct: 635 KEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEE 694
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K + L HSE+LA+ + +M + IRI+KN+R+C DCH K S ++G+EI+
Sbjct: 695 QKVQTLCSHSERLAITYGLMKTPP----GTPIRIVKNLRVCGDCHTASKFISKVVGREII 750
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
RD++RFHHF D +CSC D+W
Sbjct: 751 ARDAHRFHHFVDGVCSCGDFW 771
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 215/419 (51%), Gaps = 40/419 (9%)
Query: 1 FLHSTQIYATLFHA----CALHGNIKQAMQLHEHMINNF--PNEPQDLFVTNHLINMYAK 54
L T++Y+ +F CA +++Q ++H ++ + PN ++ N L++MYAK
Sbjct: 88 ILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNR----YLENTLLSMYAK 143
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASV 113
G L DAR +FD + RN+VSWTA+I + E ++ + ++ L P++ + S+
Sbjct: 144 CGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSL 203
Query: 114 L---ISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRN 167
L + + L G+ VH K L+ V +L+ MY+K C D +A +F+ + +N
Sbjct: 204 LNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAK-CGDISKAQVIFDKLPEKN 262
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
V++W +IA +A+ + AL L ++Q+ +AP+ T++ +L+ C
Sbjct: 263 VVTWTLLIAG-------------YAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT 309
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
+ H VH I + G+ + + NALI Y +CG + ++++F + + D+V+W +
Sbjct: 310 TPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTA 369
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++ YA G EA+ LF M ++PD TF S L++CS +QEG K H L +
Sbjct: 370 MVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEG-KSIHQQLVHA 428
Query: 345 GVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G LD Y + +V + + G + +A + +M E + V W+ ++ C +HG R A
Sbjct: 429 GY--SLDVYLQSALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGCAQHGRCREA 484
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 177/358 (49%), Gaps = 38/358 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C ++ ++H ++I + ++++V N LI MY K G L +AR LF +
Sbjct: 301 YTSILQGCTTPLALEHGKKVHRYIIQS--GYGREIWVVNALITMYCKCGGLKEARKLFGD 358
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD-------- 118
+P R+VV+WTA+++GYAQ G +E LF + Q P++ + S L SC
Sbjct: 359 LPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEG 418
Query: 119 -YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
+H +LVHA +SLD VY+ +AL++MY+K D+A VF M RNV++W +MI
Sbjct: 419 KSIHQQLVHA---GYSLD--VYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMIT 473
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERH 234
C A+ EAL F Q++++G+ PD TF+ VL AC GLV E
Sbjct: 474 ---GC----------AQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 520
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYA 293
S+ YG + + + R G + ++ V M + S W ++L A
Sbjct: 521 KH-FRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACR 579
Query: 294 LHGQAKEALQLFSN-MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+H + + N + + P D +V+L + + AG ++ KV ++E VV +
Sbjct: 580 IHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKV-RQVMEKRDVVKE 636
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 124/242 (51%), Gaps = 7/242 (2%)
Query: 176 AAFRACKLEAQA--IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
A FR A + + + K +EAL + + +G F +L+ CA L +
Sbjct: 54 AGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLE 113
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH+ I K G + + + N L+ YA+CGS++ +++VFD + ++VSW ++++A+
Sbjct: 114 QGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFV 173
Query: 294 LHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
Q EA + + M + +PD TFVSLL+A ++ L+Q G KV H + G+ +
Sbjct: 174 AGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKV-HMEIAKAGLELEP 232
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+V + + G I +A+ + ++P E + V W++L+ + G+ +A K++Q
Sbjct: 233 RVGTSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQ 291
Query: 411 LE 412
E
Sbjct: 292 AE 293
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/629 (39%), Positives = 360/629 (57%), Gaps = 64/629 (10%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAK---FGY-- 57
++ + L +CA G ++ Q+H H++ ++P FV LINMYA+ GY
Sbjct: 131 NSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP---FVHTSLINMYAQNGELGYAE 187
Query: 58 --------------------------LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEE 91
LDDAR LF+E+P R+ VSW A+I+GYAQ G EE
Sbjct: 188 LVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEE 247
Query: 92 CFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALIN 146
F + + PNE ++ +VL +C G V + L +++ + NALI+
Sbjct: 248 ALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALID 307
Query: 147 MYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
MYSK C D +A +FE + +++ISWN MI + + M + +EAL LF
Sbjct: 308 MYSK-CGDLDKARDLFEGICEKDIISWNVMIGGY-------------SHMNSYKEALALF 353
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI-AKYGFEDDTVIANALIHAYAR 263
R++Q+ + P+ TF +L ACA L +H+ I K+ +T + +LI YA+
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSL 320
CG+I +KQVF M L SWN+++ A+HG A AL+LF M +PD TFV +
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
LSACSHAGLV+ G + F SM+E++ + P+L HY CM+DLLGR G EAE L++ M M+P
Sbjct: 474 LSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP 533
Query: 381 DSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRK 440
D IW LLG+CR HG L E AA L +LEP + +V +SNIY +G ++ IR
Sbjct: 534 DGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRT 593
Query: 441 EMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSL 500
++ ++K PG S IE+++ VHEF G K H Q + I+K L+E+ L+ G+VP+TS
Sbjct: 594 KLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSE 653
Query: 501 ALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLAS 560
L+D++EE KE L HHSEKLA+ F +++ + + IRI+KN+R+C +CH+ +KL S
Sbjct: 654 VLYDMDEEWKEGSLSHHSEKLAIAFGLIST----KPETTIRIVKNLRVCGNCHSAIKLIS 709
Query: 561 DLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +EI+ RD NRFHHFKD CSC DYW
Sbjct: 710 KIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 199/436 (45%), Gaps = 65/436 (14%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDE 67
TL C N+KQ +H +I + Q F + LI A FG L A LF+
Sbjct: 37 TLLSTCKSFQNLKQ---IHSQIIKTGLHNTQ--FALSKLIEFCAISPFGNLSYALLLFES 91
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVLISCDYL----HG 122
+ + N W +I G + + + LL PN ++ +L SC + G
Sbjct: 92 IEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG 151
Query: 123 KLVHALALKFSLDAHVYVANALINMYS--------------------------------K 150
K +H LK L++ +V +LINMY+ +
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
C D+A ++FE + R+ +SWN+MIA +A+ EEAL F++++R
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAG-------------YAQSGRFEEALAFFQEMKRA 258
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+AP+ T VL ACA + + V S I +G + + NALI Y++CG + +
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+ +F+ + D++SWN ++ Y+ KEAL LF M NV+P+ TFVS+L AC++
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYL 378
Query: 328 GLVQEGNKVFHSMLENHGV-VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV-IW 385
G + G K H+ ++ + + + ++D+ + G I A+++ M+P S+ W
Sbjct: 379 GALDLG-KWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG--MKPKSLGSW 435
Query: 386 SVLLGSCRKHGETRLA 401
+ ++ HG +A
Sbjct: 436 NAMISGLAMHGHANMA 451
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
Query: 238 VHSLIAKYGFEDDTVIANALIH--AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+HS I K G + + LI A + G++S + +F+ + + WN++++ +L
Sbjct: 51 IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLS 110
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
A+ + M V+P+S TF LL +C+ G QEG ++ H + G+
Sbjct: 111 SSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI-HGHVLKLGLESDPFV 169
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
+ ++++ + G + AE + + + D+V ++ L+ G + A +++
Sbjct: 170 HTSLINMYAQNGELGYAELVFSKSSLR-DAVSFTALITGYTLRG---CLDDARRLFEEIP 225
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
D++ + M Y SG F +A +EMK + V
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/559 (40%), Positives = 341/559 (61%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL+V L+++Y KFG +D +F+EMPK +V+ W+ +IS YAQ + E LF +
Sbjct: 176 DLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR 235
Query: 101 QYF-FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ F PN+F+ ASVL SC + GK VH LK LD +V+V+NAL+++Y+K C
Sbjct: 236 RAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAK-CGRL 294
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D + K+F + RN ++WN+MI + + + ++AL L++ + +
Sbjct: 295 DNSMKLFMELPNRNEVTWNTMIVGY-------------VQSGDGDKALSLYKNMLECQVQ 341
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
T+S VL+ACA L + +HSL K ++ D V+ NALI YA+CGSI ++ V
Sbjct: 342 ASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLV 401
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLV 330
FD ++ D +SWN+++ Y++HG EAL+ F M P+ TFVS+LSACS+AGL+
Sbjct: 402 FDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLL 461
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G F SM++++G+ P ++HY CMV LLGR G + +A KLI E+P+EP+ +W LLG
Sbjct: 462 DIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLG 521
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+C H + L ++A ++ Q++P D V +SNIY + +N +RK MK V+K
Sbjct: 522 ACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKE 581
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PGLSWIE + VH F+ G HP + I LE L + + GYVP+ + L D+E++ K
Sbjct: 582 PGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEK 641
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
+ L+ HSE+LAL F ++ S R IRI+KN+RIC DCH+ +KL S ++ ++I++R
Sbjct: 642 KRHLWVHSERLALAFGLIRTPS----RGHIRILKNLRICTDCHSAIKLISKIVQRDIIIR 697
Query: 571 DSNRFHHFKDRICSCNDYW 589
D NRFHHF+D ICSC DYW
Sbjct: 698 DMNRFHHFQDGICSCGDYW 716
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 189/363 (52%), Gaps = 24/363 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
FV LI+ YA G ++ AR FD + +++VSWT +++ YA++ ++ +LF + +
Sbjct: 77 FVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMV 136
Query: 102 YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
F PN F+ A VL +C L GK VH LK + +YV L+++Y+K A++
Sbjct: 137 GFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDV 196
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+VFE M +VI W+ MI+ +A+ EA+ LF Q++R + P+
Sbjct: 197 LRVFEEMPKHDVIPWSFMISR-------------YAQSNQSREAVELFGQMRRAFVLPNQ 243
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TF+ VL++CA + + VH + K G + + ++NAL+ YA+CG + S ++F +
Sbjct: 244 FTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFME 303
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
+ + V+WN+++ Y G +AL L+ NM VQ T+ S+L AC+ ++ G
Sbjct: 304 LPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELG 363
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
++ HS+ + ++D+ + G I A +L+ +M E D + W+ ++
Sbjct: 364 TQI-HSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAMISGYS 421
Query: 394 KHG 396
HG
Sbjct: 422 MHG 424
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 166/340 (48%), Gaps = 26/340 (7%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVL-----ISCDYLH 121
MP RN VS+ LI GY Q +E LF + + N F ++L + C L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
L HA K +++ +V ALI+ Y+ + A + F+ + ++++SW M+A +
Sbjct: 61 YSL-HACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACY-- 117
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ +++L LF +++ G P+ TF+ VLKAC GL +VH
Sbjct: 118 -----------AENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHG 166
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K +E D + L+ Y + G + +VF++M HD++ W+ ++ YA Q++E
Sbjct: 167 CVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSRE 226
Query: 301 ALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A++LF M V P+ TF S+L +C+ +Q G +V H + G+ + ++
Sbjct: 227 AVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQV-HCHVLKVGLDGNVFVSNALM 285
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
D+ + GR+ + KL E+P + V W+ ++ + G+
Sbjct: 286 DVYAKCGRLDNSMKLFMELP-NRNEVTWNTMIVGYVQSGD 324
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 162/324 (50%), Gaps = 27/324 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ +CA N++ Q+H H++ ++FV+N L+++YAK G LD++ LF E
Sbjct: 246 FASVLQSCASIENLQLGKQVHCHVLK--VGLDGNVFVSNALMDVYAKCGRLDNSMKLFME 303
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----G 122
+P RN V+W +I GY Q G+ ++ L+ ++L+ +E + +SVL +C L G
Sbjct: 304 LPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELG 363
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H+L+LK D V V NALI+MY+K A VF+ + R+ ISWN+MI+ +
Sbjct: 364 TQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMH 423
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
L +A++ F M+ E P+ TF +L AC AGL+ + +
Sbjct: 424 GLVGEALKAFQMMQETE-------------CVPNKLTFVSILSACSNAGLL-DIGQNYFK 469
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQA 298
S++ YG E ++ R G + + ++ +++ V W ++L A +H
Sbjct: 470 SMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDV 529
Query: 299 KEALQLFSN-MNVQP-DSATFVSL 320
+ + + P D AT V L
Sbjct: 530 DLGIMSAQQILQIDPQDEATHVLL 553
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 22/244 (9%)
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
M RN +S+ ++I + Q+ +L +E + LF ++ REG + F+ +
Sbjct: 1 MPDRNTVSFVTLIQGY------VQSFQL-------DEVVDLFSRVHREGHELNPFVFTTI 47
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
LK + A ++H+ I K G E + + ALI AYA CGS++ ++Q FD + D+
Sbjct: 48 LKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDM 107
Query: 283 VSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHS 339
VSW ++ YA + + +++LQLF+ M + P+ TF +L AC G V
Sbjct: 108 VSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGC 167
Query: 340 MLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+L+ ++D Y ++DL + G + ++ EMP + D + WS ++ + +
Sbjct: 168 VLKT---CYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP-KHDVIPWSFMISRYAQSNQ 223
Query: 398 TRLA 401
+R A
Sbjct: 224 SREA 227
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/591 (41%), Positives = 342/591 (57%), Gaps = 33/591 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQD----LFVTNHLINMYAKFGYLDDARHLFD 66
L C HG +H H+ + P P D LFV+N L +MYAKFG LDDA +FD
Sbjct: 70 LVKLCVRHGTADHGRLIHRHVEAHGP-LPHDGAGGLFVSNSLASMYAKFGLLDDALRMFD 128
Query: 67 EMPKRNVVSWTALISGYAQ-HGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHGKL 124
MP RNVV+WT +++ A G +E R ++ + PN ++ +SVL +C G L
Sbjct: 129 GMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGAC-TTPGML 187
Query: 125 --VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VHA +K LD+ V+V ++LI+ Y K D +VF+ M R+++ WNS+IA F
Sbjct: 188 TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQS 247
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
AIELF +MK+ G + + T + VL+AC G+V VH+
Sbjct: 248 GDGVGAIELFMRMKDA-------------GFSSNQGTLTSVLRACTGMVMLEAGRQVHAH 294
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ KY + D ++ NAL+ Y +CGS+ + +F +M D++SW++++ A +G++ EA
Sbjct: 295 VLKY--DRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEA 352
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L++F M Q P+ T V +L ACSHAGLV++G F SM G+ P+ +H+ CMVD
Sbjct: 353 LRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVD 412
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G++ EA + I M +EPDSVIW LLG+CR H LA AA ++ +LEP D
Sbjct: 413 LLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGA 472
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
V +SN Y + A K M+ +RK PG SWIE+E RVH F +G HP + I
Sbjct: 473 RVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTI 532
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
++L LIG++K +GYVP+T L D+ E KE+ L +HSEK+A+VF M+ +
Sbjct: 533 IQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMH----AVDGK 588
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRIMKN+RIC DCH F KL S G+ IV+RD RFHHF+D CSC DYW
Sbjct: 589 PIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/590 (38%), Positives = 342/590 (57%), Gaps = 27/590 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y AC + + Q+H MI +F+ L+ MY + G LDDAR++ D
Sbjct: 45 YEAAITACIERRALWEGRQVHARMIT--ARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 102
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCD----YLHG 122
MP+R+VVSWT +ISGY+Q E LF +L+ PNE++LA+VL SC G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K VH+L +K + ++H++V ++L++MY+KS EA +VF+ + R+V+S ++I+ +
Sbjct: 163 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGY--- 219
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ +EEAL LFRQL EGM + TF+ ++ A +GL + + VH+L
Sbjct: 220 ----------AQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 269
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I + + N+LI Y++CG + S++VFD M +VSWN++L Y HG E
Sbjct: 270 ILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEV 329
Query: 302 LQLFSNMN--VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+ LF +++ V+PDS T +++LS CSH GLV EG +F ++++ + HY C++DL
Sbjct: 330 ISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 389
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR GR+ +A LI MP E IW LLG+CR H + EL A KL ++EP ++ +
Sbjct: 390 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNY 449
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V +SNIY +G + +RK M V K PG SWI ++ +H F S + HP ++ I
Sbjct: 450 VILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDIN 509
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
K++E+ +K G+VP+ S LHD+++E KE L HSEKLA+ F +MN
Sbjct: 510 AKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPP----GLT 565
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+RICVDCHNF K S + +EI +RD NRFH C+C DYW
Sbjct: 566 IRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/583 (38%), Positives = 344/583 (59%), Gaps = 30/583 (5%)
Query: 17 LHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSW 76
L N+ Q Q+H + Q+L V N L+ Y+ + LDDA LFD M R+ VSW
Sbjct: 747 LPTNLTQVRQVHXQA--SVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSW 804
Query: 77 TALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALK 131
+ ++ G+A+ G+ CF F L++ P+ ++L V+ +C L G+L+H + K
Sbjct: 805 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYK 864
Query: 132 FSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
F LD +V AL++MY K C ++A +F+ M R++++W MI + C
Sbjct: 865 FGLDLDHFVCAALVDMYGK-CREIEDARFLFDKMXERDLVTWTVMIGGYAECG------- 916
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
N E+L LF +++ EG+ PD V+ ACA L A + I + F+
Sbjct: 917 ------NANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 970
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
D ++ A+I +A+CG + ++++FD+M +++SW++++ AY HGQ ++AL LF M
Sbjct: 971 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 1030
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ P+ T VSLL ACSHAGLV+EG + F M E++ V + HY C+VDLLGR GR+
Sbjct: 1031 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRL 1090
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
EA KLI M E D +W LG+CR H + LAE AAT L +L+P + ++ +SNIY
Sbjct: 1091 DEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIY 1150
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI 486
+G + IR M R++K PG +WIE++N+ H+F+ G HP+ + I++ L+ L
Sbjct: 1151 ANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLG 1210
Query: 487 GQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNI 546
+L+ +GYVP+T+ LHD++EE K LY HSEKLA+ F ++ E + IRI+KN+
Sbjct: 1211 NKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATP----EHTPIRIIKNL 1266
Query: 547 RICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+C DCH F KL S + G+ I+VRD+NRFHHFK+ CSC DYW
Sbjct: 1267 RVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/538 (37%), Positives = 312/538 (57%), Gaps = 30/538 (5%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ Q Q+H + +++ V N LI Y+ + LDDA LFD M R+ VSW+ +
Sbjct: 74 NLTQVRQVHAQA--SVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVM 131
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSL 134
+ G+A+ G+ CF F L++ P+ ++L V+ +C L G+L+H + KF L
Sbjct: 132 VGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 191
Query: 135 DAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
D +V AL++MY K C ++A +F+ M+ R++++W MI + C
Sbjct: 192 DLDHFVCAALVDMYVK-CREIEDARFLFDKMQERDLVTWTVMIGGYAECG---------- 240
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
E+L LF +++ EG+ PD V+ ACA L A + I + F+ D +
Sbjct: 241 ---KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVI 297
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ A+I YA+CG + ++++FD+M +++SW++++ AY HGQ ++AL LF M
Sbjct: 298 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSG 357
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ PD T SLL ACSHAGLV+EG + F SM E++ V + HY C+VDLLGR GR+ EA
Sbjct: 358 MLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEA 417
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
KLI+ M +E D +W LG+CR H + LAE AAT L +L+ + +V +SNIY +
Sbjct: 418 LKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANA 477
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
G + IR M R++K PG +WIE++N+ H+F+ G HP+ + I++ L+ L +L
Sbjct: 478 GRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKL 537
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
+ +GYVP+T+ LHD++EE K LY HSEKLA+ F ++ E + IRI+KN+R
Sbjct: 538 ELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATP----EHTPIRIIKNLR 591
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/590 (38%), Positives = 342/590 (57%), Gaps = 27/590 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y AC + + Q+H MI +F+ L+ MY + G LDDAR++ D
Sbjct: 13 YEAAITACIERRALWEGRQVHARMIT--ARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCD----YLHG 122
MP+R+VVSWT +ISGY+Q E LF +L+ PNE++LA+VL SC G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K VH+L +K + ++H++V ++L++MY+KS EA +VF+ + R+V+S ++I+ +
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGY--- 187
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ +EEAL LFRQL EGM + TF+ ++ A +GL + + VH+L
Sbjct: 188 ----------AQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 237
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I + + N+LI Y++CG + S++VFD M +VSWN++L Y HG E
Sbjct: 238 ILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEV 297
Query: 302 LQLFSNMN--VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+ LF +++ V+PDS T +++LS CSH GLV EG +F ++++ + HY C++DL
Sbjct: 298 ISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 357
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR GR+ +A LI MP E IW LLG+CR H + EL A KL ++EP ++ +
Sbjct: 358 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNY 417
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V +SNIY +G + +RK M V K PG SWI ++ +H F S + HP ++ I
Sbjct: 418 VILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDIN 477
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
K++E+ +K G+VP+ S LHD+++E KE L HSEKLA+ F +MN
Sbjct: 478 AKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPP----GLT 533
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+RICVDCHNF K S + +EI +RD NRFH C+C DYW
Sbjct: 534 IRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/593 (38%), Positives = 345/593 (58%), Gaps = 31/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ +AC+ ++ +H H+ + D+ + N LI+MYA+ G L AR LF
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISED--GHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHG 122
MPKR+++SW A+I+GYA+ + E RL+ + + P + +L +C Y G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K++H L+ + ++ ++ANAL+NMY + C EA VFE + R+VISWNSMIA
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRR-CGSLMEAQNVFEGTQARDVISWNSMIAGH-- 507
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ + E A LF+++Q E + PD TF+ VL C +H
Sbjct: 508 -----------AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I + G + D + NALI+ Y RCGS+ ++ VF + + D++SW +++ A G+ +
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616
Query: 301 ALQLFSNMNVQ----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
A++LF M + PD +TF S+LSAC+HAGLV EG ++F SM +GV+P ++HY C+
Sbjct: 617 AIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCL 676
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
V LLGR R EAE LI +MP PD+ +W LLG+CR HG LAE AA +L +
Sbjct: 677 VGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNP 736
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ +SN+Y +G ++ IR+ M+G +RK PG SWIE++N +HEF + + HP+
Sbjct: 737 AVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETA 796
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ +L+ L +++ GY P+T LHD+ + H+E L HSE+LA+ + ++
Sbjct: 797 EIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPP---- 852
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+RIC DCH K S L+G+EI+ RDSNRFH FK+ CSC DYW
Sbjct: 853 GTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 225/455 (49%), Gaps = 35/455 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L C + +A ++H M+ D+F++N LINMY K + DA +F E
Sbjct: 30 YVALLQNCTRKRLLPEAKRIHAQMVE--AGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
MP+R+V+SW +LIS YAQ G ++ F+LF + F PN+ + S+L +C + +G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K +H+ +K V N+L++MY K C D A +VF + R+V+S+N+M+
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGK-CGDLPRARQVFAGISPRDVVSYNTMLG---- 202
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L+A+ +E L LF Q+ EG++PD T+ +L A +H
Sbjct: 203 ---------LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L + G D + AL+ RCG + +KQ F + D+V +N+++ A A HG E
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVE 313
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A + + M V + T++S+L+ACS + ++ G K+ HS + G + ++
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALI 372
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIW-SVLLGSCRKHGETRLAELAATKLKQLE---P 413
+ R G + +A +L MP D + W +++ G R+ E R + K Q E P
Sbjct: 373 SMYARCGDLPKARELFYTMPKR-DLISWNAIIAGYARR--EDRGEAMRLYKQMQSEGVKP 429
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
G + F+ + + S ++ ++I +++ S ++
Sbjct: 430 G-RVTFLHLLSACANSSAYADGKMIHEDILRSGIK 463
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 225/458 (49%), Gaps = 39/458 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLD 59
F+ + Y ++ AC ++ ++H +I + +P+ V N L++MY K G L
Sbjct: 124 FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPR---VQNSLLSMYGKCGDLP 180
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD 118
AR +F + R+VVS+ ++ YAQ +EC LF + + P++ + ++L +
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWN 172
GK +H L ++ L++ + V AL+ M + C D A + F+ + R+V+ +N
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVR-CGDVDSAKQAFKGIADRDVVVYN 299
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
++IAA +A E + +M+++ G+A + T+ +L AC+
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSD-------------GVALNRTTYLSILNACSTSKAL 346
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+HS I++ G D I NALI YARCG + ++++F M DL+SWN+I+ Y
Sbjct: 347 EAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGY 406
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
A EA++L+ M V+P TF+ LLSAC+++ +G K+ H + G+
Sbjct: 407 ARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG-KMIHEDILRSGIKSN 465
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATK 407
++++ R G ++EA+ + E D + W+ ++ +HG ET +
Sbjct: 466 GHLANALMNMYRRCGSLMEAQNVF-EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQ 524
Query: 408 LKQLEPGDSLGFVQMSNIYCLSGSFNKARL-IRKEMKG 444
++LEP D++ F + LSG N L + K++ G
Sbjct: 525 NEELEP-DNITFASV-----LSGCKNPEALELGKQIHG 556
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T+ +L+ C A +H+ + + G D ++N LI+ Y +C S+ + QVF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQ 331
+M D++SWNS++ YA G K+A QLF N P+ T++S+L+AC ++
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G K+ HS + G ++ + G+ G + A ++ + D V ++ +LG
Sbjct: 146 NGKKI-HSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR-DVVSYNTMLG 202
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ D AT+V+LL C+ L+ E ++ M+E GV P + ++++ + +L+A
Sbjct: 23 TETDRATYVALLQNCTRKRLLPEAKRIHAQMVE-AGVGPDIFLSNLLINMYVKCRSVLDA 81
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV--QMSNIYC 427
++ +EMP D + W+ L+ + G + A + E + GF+ +++ I
Sbjct: 82 HQVFKEMPRR-DVISWNSLISCYAQQGFKKKA------FQLFEEMQNAGFIPNKITYISI 134
Query: 428 LSGSFNKARL 437
L+ ++ A L
Sbjct: 135 LTACYSPAEL 144
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/595 (39%), Positives = 353/595 (59%), Gaps = 29/595 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ ++Y ++ ACA N+ A +H H+ + D F+ N LI+MY K G + DARH
Sbjct: 59 TPRLYHSIIAACAQFKNLAGARAIHAHLSRSC--LAGDAFLLNSLIHMYCKCGAVSDARH 116
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG 122
+FD+MP R+VVSWT LI+GYAQ+ E L +L+ F PN F+ S+L + G
Sbjct: 117 VFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGG 176
Query: 123 ----KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
+ +HALA+K++ D VYV +AL++MY++ D A VF+ + +N +SWN++IA
Sbjct: 177 CSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAG 236
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F A+ + E L F ++QR G T+S + A A +
Sbjct: 237 F-------------ARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 283
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH+ + K G + + N ++ YA+ GS+ +++VFD+M DLV+WN++L A A +G
Sbjct: 284 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 343
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
KEA+ F + +Q + TF+S+L+ACSH GLV+EG F M++++ V P++DHY
Sbjct: 344 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYF-DMMKDYNVQPEIDHYV 402
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
VDLLGR G + EA + +MPMEP + +W LLG+CR H ++ + AA + +L+P
Sbjct: 403 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 462
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D+ V + NIY +G +N A +RK MK + V+K P SW++IEN VH F + HP+
Sbjct: 463 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 522
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I++ EE+ ++K GYVP T+ L I E+ +E +L +HSEK+AL FA++N +
Sbjct: 523 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPA-- 580
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRIMKNIRIC DCH+ K S + +EIVVRD+NRFHHF + CSC DYW
Sbjct: 581 --GASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+AP + ++ ACA A A+H+ +++ D + N+LIH Y +CG++S ++
Sbjct: 56 LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
VFDKM D+VSW ++ YA + EA+ L +M +P+ TF SLL A G
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
G ++ H++ + + + ++D+ R + ++ ++ + + + V W+ L
Sbjct: 176 GCSIGEQM-HALAVKYNWDEDVYVGSALLDMYARCEQ-MDMAIMVFDRLVSKNEVSWNAL 233
Query: 389 L-GSCRK-HGETRLAELA 404
+ G RK GET L + A
Sbjct: 234 IAGFARKADGETTLMKFA 251
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/610 (39%), Positives = 353/610 (57%), Gaps = 42/610 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVT-NHLINMYAKFGYLDDARHLFDE 67
L A G I +A L E + P + V+ N +I Y + G +D+A+ LFD
Sbjct: 325 TALLTGLARCGRITEARILFEQI-------PDPIVVSWNAMITGYMQNGMVDEAKELFDR 377
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HG 122
MP RN +SW +I+GYAQ+G +EE L +L P+ SL S ++C ++ G
Sbjct: 378 MPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETG 437
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAW--KVFENMEFRNVISWNSMIAAFRA 180
+ VH+LA+K + YV NALI+MY K C + + +VF M ++ +SWNS IAA
Sbjct: 438 RQVHSLAVKAGCQFNSYVCNALISMYGK-CRNMEYVRQVFNRMRVKDTVSWNSFIAALVQ 496
Query: 181 CKLEAQA------------------IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
+ A I +A+ + +EA+ F+ + E P+ +I+
Sbjct: 497 NNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTIL 556
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L C GL + + +H++ K+G + + ++ANAL+ Y +CG S +VFD M D+
Sbjct: 557 LSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDI 615
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+WN+ + A HG +EA++++ +M V P+ TFV LL+ACSHAGLV EG + F S
Sbjct: 616 FTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKS 675
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
M ++G+ P L+HYACMVDLLGR G + AEK I +MP+EPD+VIWS LLG+C+ H
Sbjct: 676 MSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAE 735
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
+ AA KL EP ++ +V +SNIY G + + +RK MK V K PG SW++I
Sbjct: 736 IGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIR 795
Query: 460 NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSE 519
N+VH F +G K+H + E I L++L L+G GYVP+T LHDI+EE KE L +HSE
Sbjct: 796 NKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSE 855
Query: 520 KLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
KLA+ + ++ + + I+IMKN+RIC DCH F+K S + ++I +RD NRFHHF+
Sbjct: 856 KLAVAYGLL----VTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFR 911
Query: 580 DRICSCNDYW 589
+ CSC D+W
Sbjct: 912 NGSCSCGDFW 921
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 188/388 (48%), Gaps = 37/388 (9%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G +++A ++ + M + +D+ N +I+ Y G L+DAR LFD + NV + T
Sbjct: 47 GRLREAREVFDAMPH------RDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATI 100
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVHALALKFSLDAH 137
L+SGYA+ G + R+F + P ++A + ++SC +G + A L ++ +
Sbjct: 101 LLSGYARLGRVLDARRVFDGM-----PERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR 155
Query: 138 -VYVANALINMY--SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
V N+++ Y S+ D AW +F+ M RN+++W MI+ + ++
Sbjct: 156 DVTSWNSMVTGYCHSRQMVD-AWNLFKQMPQRNLVTWTVMISGY-------------VRI 201
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
+ + +FR + EG +PD F+ VL A GL + L+ K GFE D VI
Sbjct: 202 EQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIG 261
Query: 255 NALIHAYARCGS-ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
++++ Y R S + ++ + FD M + +W++++ A + G+ A+ ++ V+
Sbjct: 262 TSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI 321
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
+ +LL+ + G + E +F + + P + + M+ + G + EA++L
Sbjct: 322 PSQ-TALLTGLARCGRITEARILFEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELF 375
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLA 401
MP +++ W+ ++ ++G + A
Sbjct: 376 DRMPFR-NTISWAGMIAGYAQNGRSEEA 402
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQ 311
+A I AR G + +++VFD M + D+++WNS++ AY G ++A LF S NV+
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVR 96
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
T LLS + G V + +VF M E + V + MV + G I A +
Sbjct: 97 ----TATILLSGYARLGRVLDARRVFDGMPERNTVA-----WNAMVSCYVQNGDITMARR 147
Query: 372 LIREMPMEPDSVIW-SVLLGSC 392
L MP D W S++ G C
Sbjct: 148 LFDAMPSR-DVTSWNSMVTGYC 168
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/553 (41%), Positives = 340/553 (61%), Gaps = 25/553 (4%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-Q 101
F+ N LINMY KFG L DA+ +FD+MP RNVVSWT +IS Y+ ++ +L +
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 102 YFFPNEFSLASVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
PN F+ +SVL +CD L + +H +K LD+ V+V +ALI++YS+ + A +V
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ M +++ W+S+IA F A+ + +EAL LF++++R G T
Sbjct: 121 FDEMVTGDLVVWSSIIAGF-------------AQNSDGDEALRLFKRMKRAGFLAQQTTL 167
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ VL+AC GL VH + KY + D ++ NAL+ Y +CGS+ + VF +M
Sbjct: 168 TSVLRACTGLALLELGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMVE 225
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKV 336
D++SW++++ A +G +KEAL+LF +M V +P+ T V +L ACSHAGLV+EG
Sbjct: 226 KDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYY 285
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
FHSM E G+ P +HY CM+DLLGR GR+ EA LI EM EPD+V W LL +CR H
Sbjct: 286 FHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHR 345
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+A AA ++ +L+P D+ +V +SNIY + +N +R+ M ++K PG SWI
Sbjct: 346 NVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWI 405
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
E+ ++H F G + HPQ I +L +LI +L G+GYVP+T+ L D+E E ++ L +
Sbjct: 406 EVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRY 465
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+VF +M SL R ++ IRI KN+RIC DCH F KL + + + IV+RD R+H
Sbjct: 466 HSEKLAIVFGLM---SLPRGQT-IRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYH 521
Query: 577 HFKDRICSCNDYW 589
HF+D +CSC D+W
Sbjct: 522 HFQDGLCSCGDFW 534
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 168/324 (51%), Gaps = 32/324 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+++ AC N++Q LH +I D+FV + LI++Y+++G L++A +FDE
Sbjct: 69 YSSVLRACDGLFNLRQ---LHCCIIK--IGLDSDVFVRSALIDVYSRWGELENALRVFDE 123
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----G 122
M ++V W+++I+G+AQ+ + +E RLF + + F + +L SVL +C L G
Sbjct: 124 MVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELG 183
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ VH LK+ D + + NAL++MY K + ++A VF M ++VISW++MIA
Sbjct: 184 RQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG---- 237
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
A+ +EAL LF ++ G+ P++ T VL AC AGLV E H
Sbjct: 238 ---------LAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLV-EEGLYYFH 287
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQA 298
S+ +G + +I R G +S + + ++M D V+W ++L A +H
Sbjct: 288 SMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNV 347
Query: 299 KEALQLFSN-MNVQP-DSATFVSL 320
A+ + + P D+ T+V L
Sbjct: 348 DVAIHAAKQILRLDPQDAGTYVLL 371
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
FL ++ AC ++ Q+H H++ QDL + N L++MY K G L+D
Sbjct: 160 FLAQQTTLTSVLRACTGLALLELGRQVHVHVLK----YDQDLILNNALLDMYCKCGSLED 215
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDY 119
A +F M +++V+SW+ +I+G AQ+G ++E +LF S+ + PN ++ VL +C
Sbjct: 216 ANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACS- 274
Query: 120 LHGKLV-------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVIS 170
H LV H++ F +D +I++ ++ EA + ME + ++
Sbjct: 275 -HAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVT 333
Query: 171 WNSMIAAFRA 180
W +++ A R
Sbjct: 334 WRALLNACRV 343
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/560 (39%), Positives = 334/560 (59%), Gaps = 30/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ + N LINMY + G L DA +F + RNV+SWTA+I G+A G + F LF +
Sbjct: 621 DVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQ 680
Query: 101 QYFF-PNEFSLASVLISC------DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
F P + + +S+L +C D + H L + LD V NALI+ YSKS +
Sbjct: 681 NDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGV--GNALISAYSKSGS 738
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+A KVF+ M R+++SWN MIA + L A++ F + Q+Q +G+
Sbjct: 739 MTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQ------------FAY-QMQEQGV 785
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ +F +L AC+ VH+ I K + D + ALI YA+CGS+ +++
Sbjct: 786 VLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQE 845
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGL 329
VFD T ++V+WN+++ AYA HG A +AL F+ M+ ++PD +TF S+LSAC+H+GL
Sbjct: 846 VFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGL 905
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V EGN++F S+ HG+ P ++HY C+V LLGR GR EAE LI +MP PD+ +W LL
Sbjct: 906 VMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLL 965
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G+CR HG LAE AA +L + +V +SN+Y +G ++ IR+ M+G +RK
Sbjct: 966 GACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRK 1025
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PG SWIE++N +HEF + + HP+ I+++L+ L +++ GY P+T LH++++EH
Sbjct: 1026 EPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEH 1085
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
+E L HSE+LA+ + ++ + IRI KN+RIC DCH K S L+G+EI+
Sbjct: 1086 QETSLCTHSERLAIAYGLLK----TPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIA 1141
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RDSNRFH FK+ CSC D+W
Sbjct: 1142 RDSNRFHTFKNGKCSCEDFW 1161
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 208/399 (52%), Gaps = 28/399 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ +AC+ + +H H+ + D+ + N LI+MYA+ G L AR LF+
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHI--SEVGHSSDVQIGNSLISMYARCGDLPRARELFNT 445
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHG 122
MPKR+++SW A+I+GYA+ + E +L+ + + P + +L +C Y G
Sbjct: 446 MPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K++H L+ + ++ ++ANAL+NMY + C EA VFE R++ISWNSMIA
Sbjct: 506 KMIHEDILRSGIKSNGHLANALMNMYRR-CGSIMEAQNVFEGTRARDIISWNSMIAGH-- 562
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ + E A LF ++++EG+ PD TF+ VL C +H
Sbjct: 563 -----------AQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHM 611
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
LI + G + D + NALI+ Y RCGS+ + +VF + + +++SW +++ +A G+ ++
Sbjct: 612 LIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRK 671
Query: 301 ALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A +LF N +P +TF S+L AC + + EG KV +L N G ++
Sbjct: 672 AFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHIL-NSGYELDTGVGNALI 730
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ G + +A K+ +MP D + W+ ++ ++G
Sbjct: 731 SAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAGYAQNG 768
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 225/453 (49%), Gaps = 31/453 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L C ++ +A ++H M+ D+F++N LINMY K + DA +F +
Sbjct: 85 YVDLVQNCTRKRSLAEAKRIHAQMVE--AGVGPDIFLSNLLINMYVKCRSVSDAHQVFLK 142
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHG 122
MP+R+V+SW +LIS YAQ G ++ F+LF + F P++ + S+L +C + +G
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K +H+ ++ V N+L+NMY K C D A +VF + R+V+S+N+M+
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNMYGK-CEDLPSARQVFSGIYRRDVVSYNTMLG---- 257
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L+A+ EE + LF Q+ EG+ PD T+ +L A +H
Sbjct: 258 ---------LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHK 308
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L G D + AL + RCG ++ +KQ + D+V +N+++ A A HG +E
Sbjct: 309 LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEE 368
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A + + M V + T++S+L+ACS + + G ++ HS + G + ++
Sbjct: 369 AFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG-ELIHSHISEVGHSSDVQIGNSLI 427
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIW-SVLLGSCRKHGETRLAEL-AATKLKQLEPGD 415
+ R G + A +L MP + D + W +++ G R+ +L + + ++PG
Sbjct: 428 SMYARCGDLPRARELFNTMP-KRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPG- 485
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
+ F+ + + S +++ ++I +++ S ++
Sbjct: 486 RVTFLHLLSACTNSSAYSDGKMIHEDILRSGIK 518
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 201/404 (49%), Gaps = 28/404 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L A + + ++H+ +N N D+ V L M+ + G + A+ +
Sbjct: 287 YINLLDAFTTPSMLDEGKRIHKLAVNEGLN--SDIRVGTALATMFVRCGDVAGAKQALEA 344
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
R+VV + ALI+ AQHG+ EE F + + N + SVL +C G
Sbjct: 345 FADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG 404
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
+L+H+ + + V + N+LI+MY++ C D A ++F M R++ISWN++IA +
Sbjct: 405 ELIHSHISEVGHSSDVQIGNSLISMYAR-CGDLPRARELFNTMPKRDLISWNAIIAGY-- 461
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ ++ EA+ L++Q+Q EG+ P TF +L AC +H
Sbjct: 462 -----------ARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHE 510
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I + G + + +ANAL++ Y RCGSI ++ VF+ D++SWNS++ +A HG +
Sbjct: 511 DILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEA 570
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A +LF M ++PD TF S+L C + ++ G ++ H ++ G+ ++ ++
Sbjct: 571 AYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI-HMLIIESGLQLDVNLGNALI 629
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
++ R G + +A ++ + + + W+ ++G GE R A
Sbjct: 630 NMYIRCGSLQDAYEVFHSL-RHRNVMSWTAMIGGFADQGEDRKA 672
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/555 (41%), Positives = 329/555 (59%), Gaps = 31/555 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPN 106
LI YA G+LD+AR LFDE+P R+VVSW A+ISGYAQ G EE F + + PN
Sbjct: 200 LITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPN 259
Query: 107 EFSLASVLISC-----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKV 159
++ SVL +C G V + L +++ + N LI+MY K C D EA +
Sbjct: 260 VSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVK-CGDLEEASNL 318
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
FE ++ +NV+SWN MI + M +EAL LFR++ + + P+ TF
Sbjct: 319 FEKIQDKNVVSWNVMIGGY-------------THMSCYKEALGLFRRMMQSNIDPNDVTF 365
Query: 220 SIVLKACAGLVTERHASAVHSLIAK--YGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+L ACA L VH+ + K ++ + +LI YA+CG ++++K++FD M
Sbjct: 366 LSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCM 425
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGN 334
L +WN+++ +A+HG AL LFS M + PD TFV +L+AC HAGL+ G
Sbjct: 426 NTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGR 485
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM++++ V P+L HY CM+DL GR G EAE L++ M M+PD IW LLG+CR
Sbjct: 486 RYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRI 545
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H LAE A L +LEP + +V +SNIY +G + IR + +R++K PG S
Sbjct: 546 HRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCS 605
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
IE+++ VHEF G K HPQ I+K L+E+ +L+ G+VP+TS L+D++EE KE L
Sbjct: 606 SIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVL 665
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HHSEKLA+ F +++ + + IRIMKN+R+C +CH+ KL S + +EI+ RD NR
Sbjct: 666 SHHSEKLAIAFGLIST----KPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNR 721
Query: 575 FHHFKDRICSCNDYW 589
FHHFKD CSC DYW
Sbjct: 722 FHHFKDGSCSCKDYW 736
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 173/389 (44%), Gaps = 58/389 (14%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVL 114
G L A LF + N V W +I G + + + ++ PNE++ S+
Sbjct: 76 GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135
Query: 115 ISCDYLH----GKLVHALALKFSLDAHVYVANALINMY---------------------- 148
SC + GK VHA LK L+ + +V +LINMY
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195
Query: 149 ----------SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
SK DEA ++F+ + R+V+SWN+MI+ +A+ E
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISG-------------YAQSGRVE 242
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH-ASAVHSLIAKYGFEDDTVIANAL 257
EA+ F +++R + P+ T VL ACA + + V S I G + + N L
Sbjct: 243 EAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGL 302
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
I Y +CG + + +F+K+ ++VSWN ++ Y KEAL LF M N+ P+
Sbjct: 303 IDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPND 362
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKL 372
TF+S+L AC++ G + G K H+ ++ + + + + ++D+ + G + A+++
Sbjct: 363 VTFLSILPACANLGALDLG-KWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRI 421
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLA 401
M + + W+ ++ HG T A
Sbjct: 422 FDCMNTKSLAT-WNAMISGFAMHGHTDTA 449
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 141/318 (44%), Gaps = 54/318 (16%)
Query: 112 SVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRN 167
++L +C L K +H+ +K L + + LI + S + A +F+ + N
Sbjct: 33 TLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPN 92
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
+ WN MI + + A+E + M + G P+ TF + K+C
Sbjct: 93 HVIWNHMIRGLSSSESPFLALEYYVHMISS-------------GTEPNEYTFPSIFKSCT 139
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT--------- 278
+ VH+ + K G E + + +LI+ YA+ G + ++ VFDK +
Sbjct: 140 KIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTA 199
Query: 279 ----------------------YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
D+VSWN+++ YA G+ +EA+ F M V P+
Sbjct: 200 LITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPN 259
Query: 314 SATFVSLLSACSHAG-LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+T +S+LSAC+ +G +Q GN V S +E+ G+ + ++D+ + G + EA L
Sbjct: 260 VSTMLSVLSACAQSGSSLQLGNWV-RSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNL 318
Query: 373 IREMPMEPDSVIWSVLLG 390
++ + + V W+V++G
Sbjct: 319 FEKI-QDKNVVSWNVMIG 335
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/590 (39%), Positives = 354/590 (60%), Gaps = 34/590 (5%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHLFDEMPK 70
ACA G + Q H ++ + D+ V L++MYAK G +DDAR +FD MP
Sbjct: 154 ACAEMGLLSLGRQFHCLVMKS--GLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV 211
Query: 71 RNVVSWTALISGYAQHGNAE-ECFRLFCSLLQ-YFFPNEFSLASVLISC----DYLHGKL 124
NV+SWTA+I+GY Q G + E LF ++Q PN F+ +SVL +C D G+
Sbjct: 212 HNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQ 271
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACK 182
V+AL +K L + V N+LI+MYS+ C + A K F+ + +N++S+N+++ A+
Sbjct: 272 VYALVVKMRLASINCVGNSLISMYSR-CGNMENARKAFDVLFEKNLVSYNTIVNAY---- 326
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
AK N EEA LF +++ G + TF+ +L + + +HS I
Sbjct: 327 ---------AKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRI 377
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K GF+ + I NALI Y+RCG+I + QVF++M +++SW S++ +A HG A AL
Sbjct: 378 LKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRAL 437
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+ F M V P+ T++++LSACSH GL+ EG K F SM HG+VP+++HYAC+VDL
Sbjct: 438 ETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDL 497
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G + EA +L+ MP + D+++ LG+CR HG L + AA + + +P D +
Sbjct: 498 LGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAY 557
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
+ +SN++ +G + + IRK+MK + K G SWIE+EN+VH+F G HPQ + I+
Sbjct: 558 ILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIY 617
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+L++L ++K +GY+P T LHD+EEE KE+ L+ HSEK+A+ + ++ +
Sbjct: 618 DELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTST----SRP 673
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH K S + KEIV+RD+NRFHHFKD CSCNDYW
Sbjct: 674 IRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 219/431 (50%), Gaps = 34/431 (7%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF-GYLD 59
F + + +F AC+ NI + ++ E D+ V LI+M+ K G L+
Sbjct: 38 FYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFE-SDVCVGCALIDMFVKGNGDLE 96
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD 118
A +FD MP RNVV+WT +I+ + Q G + + LF + L + P+ F+L+ V+ +C
Sbjct: 97 SAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACA 156
Query: 119 YLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA----DEAWKVFENMEFRNVIS 170
+ G+ H L +K LD V V +L++MY+K A D+A KVF+ M NV+S
Sbjct: 157 EMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMS 216
Query: 171 WNSMIAAF-RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
W ++I + ++ + +AIELF +M + + P+ TFS VLKACA L
Sbjct: 217 WTAIITGYVQSGGCDREAIELFLEMVQGQ-------------VKPNHFTFSSVLKACANL 263
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
V++L+ K + N+LI Y+RCG++ +++ FD + +LVS+N+I+
Sbjct: 264 SDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIV 323
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
AYA ++EA +LF+ + ++ TF SLLS S G + +G ++ HS + G
Sbjct: 324 NAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQI-HSRILKSGF 382
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG-ETRLAELAA 405
L ++ + R G I A ++ EM + + + W+ ++ KHG TR E
Sbjct: 383 KSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWTSMITGFAKHGFATRALE--- 438
Query: 406 TKLKQLEPGDS 416
T K LE G S
Sbjct: 439 TFHKMLEAGVS 449
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 28/283 (9%)
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKL 124
KR++VSW+ALIS YA + A E F +L+ F+PNE+ V +C GK+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 125 VHALALKFS-LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRAC 181
+ LK ++ V V ALI+M+ K D A+KVF+ M RNV++W MI F+
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A++LF M G PD T S V+ ACA + H L
Sbjct: 124 GFSRDAVDLFLDM-------------VLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCL 170
Query: 242 IAKYGFEDDTVIANALIHAYARC---GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
+ K G + D + +L+ YA+C GS+ +++VFD+M H+++SW +I+ Y G
Sbjct: 171 VMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGC 230
Query: 299 -KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+EA++LF M V+P+ TF S+L AC++ + G +V+
Sbjct: 231 DREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVY 273
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/595 (38%), Positives = 354/595 (59%), Gaps = 31/595 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ ++Y +L ACA + ++ A +H H+ + +F+ N LI++Y K G + DAR
Sbjct: 63 TPRLYHSLITACARYRSLDDARAIHAHLAGS--QFAGSVFLDNSLIHLYCKCGAVADARR 120
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVL----ISCD 118
+FD MP R++ SWT+LI+GYAQ+ +E L +L+ F PN F+ AS+L S
Sbjct: 121 VFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASAS 180
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G+ +HAL +K+ VYV +AL++MY++ C D A VF+ +E +N +SWN++IA
Sbjct: 181 SGIGEQIHALTVKYDWHDDVYVGSALLDMYAR-CGRMDMAIAVFDQLESKNGVSWNALIA 239
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F A+ + E L +F ++QR G T+S V A AG+
Sbjct: 240 GF-------------ARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH+ + K G + N ++ YA+ GS+ +++VFD++ D+V+WNS+L A+A +G
Sbjct: 287 WVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYG 346
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+EA+ F M V + TF+S+L+ACSH GLV+EG + F M++ + + P++DHY
Sbjct: 347 LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHY 405
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+VDLLGR G + +A I +MPM+P + +W LLGSCR H ++ + AA + +L+P
Sbjct: 406 VTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDP 465
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
D+ V + NIY +G ++ A +RK MK + V+K P SW+EIEN VH F + HP
Sbjct: 466 DDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHP 525
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ E I+KK EE+ Q++ GYVP T L ++E+ ++ +L +HSEK+AL FA++N
Sbjct: 526 RSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINM--- 582
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ IRIMKNIRIC DCH+ + S + +EIVVRD+NRFHHF CSC DY
Sbjct: 583 -PLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/598 (39%), Positives = 351/598 (58%), Gaps = 41/598 (6%)
Query: 4 STQIYATLFHACALHGNIK-----QAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYL 58
S + +A + C L G +K +A Q + M + +D+ N +I YA+ G +
Sbjct: 208 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSM------KVRDVVSWNTIITGYAQNGEI 261
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCD 118
D+AR LFDE P +V +WTA++SGY Q+ EE LF + + NE S ++L
Sbjct: 262 DEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER---NEVSWNAMLAG-- 316
Query: 119 YLHGKLVHALALKFSLDA--HVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSM 174
Y+ G+ V F + +V N +I Y++ C EA +F+ M R+ +SW +M
Sbjct: 317 YVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQ-CGKISEAKNLFDKMPKRDPVSWAAM 375
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
IA + ++ + EAL LF ++REG + +FS L CA +V
Sbjct: 376 IAGY-------------SQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALEL 422
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H + K G+E + NAL+ Y +CGSI + +F +M D+VSWN+++ Y+
Sbjct: 423 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 482
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG +EAL+ F +M ++PD AT V++LSACSH GLV +G + FH+M +++GV P
Sbjct: 483 HGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQ 542
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYACMVDLLGR G + EA L++ MP EPD+ IW LLG+ R HG T LAE AA K+ +
Sbjct: 543 HYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 602
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP +S +V +SN+Y SG + +R M+ V+K PG SWIEI+N+ H F+ G +
Sbjct: 603 EPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEF 662
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP+++ IF LE+L ++K GYV +TS+ LHD+EEE KE + +HSE+LA+ + IM
Sbjct: 663 HPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVS 722
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S IR++KN+R+C DCHN +K + + G+ I++RD+NRFHHFKD CSC DYW
Sbjct: 723 S----GRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 193/415 (46%), Gaps = 62/415 (14%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ +A +L E M +D+ N +++ YA+ G +DDAR +FD MP++N VSW AL
Sbjct: 136 NLGKARELFERM------PERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNAL 189
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG------KLVHALALKFS 133
+S Y Q+ EE LF S + L+S + L G K+V A S
Sbjct: 190 LSAYVQNSKLEEACVLFGSRENW----------ALVSWNCLLGGFVKKKKIVEARQFFDS 239
Query: 134 LDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
+ V+ N +I Y+++ DEA ++F+ +V +W +M++ + ++ +A ELF
Sbjct: 240 MKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELF 299
Query: 192 AKMKNEEEA-----LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
+M E L + Q +R MA + F ++ C + T
Sbjct: 300 DRMPERNEVSWNAMLAGYVQGERVEMAKE--LFDVM--PCRNVST--------------- 340
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
N +I YA+CG IS +K +FDKM D VSW +++ Y+ G + EAL+LF
Sbjct: 341 -------WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFV 393
Query: 307 NMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M + + ++F S LS C+ ++ G K H L G ++ + +
Sbjct: 394 LMEREGGRLNRSSFSSALSTCADVVALELG-KQLHGRLVKGGYETGCFVGNALLLMYCKC 452
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEPGDS 416
G I EA L +EM + D V W+ ++ +H GE L + K + L+P D+
Sbjct: 453 GSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDA 506
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 170/378 (44%), Gaps = 39/378 (10%)
Query: 26 QLHEHMINNFPNE-PQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYA 84
Q+ + P D+ N I+ Y + G +A +F MP+ + VS+ A+ISGY
Sbjct: 42 QIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYL 101
Query: 85 QHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSL-DAHVYVANA 143
++G E LF + + + +V+I + L A L + + V N
Sbjct: 102 RNGEFELARMLFDEMPE----RDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNT 157
Query: 144 LINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
+++ Y+++ C D+A +VF+ M +N +SWN++++A+ Q +L EEA
Sbjct: 158 ILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAY------VQNSKL-------EEACV 204
Query: 203 LFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
LF G +W ++V C G V ++ D V N +I
Sbjct: 205 LF------GSRENW---ALVSWNCLLGGFVKKKKIVEARQFFDSMKVR-DVVSWNTIITG 254
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSL 320
YA+ G I ++Q+FD+ HD+ +W +++ Y + +EA +LF M + + ++ ++
Sbjct: 255 YAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM-PERNEVSWNAM 313
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
L+ V+ ++F M + + M+ + G+I EA+ L +MP +
Sbjct: 314 LAGYVQGERVEMAKELFDVM-----PCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KR 367
Query: 381 DSVIWSVLLGSCRKHGET 398
D V W+ ++ + G +
Sbjct: 368 DPVSWAAMIAGYSQSGHS 385
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/556 (40%), Positives = 342/556 (61%), Gaps = 28/556 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY- 102
V L++MYAK GY++DAR +F+ +P +V+ W+ LIS YAQ E+ F +F +++
Sbjct: 288 VGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSS 347
Query: 103 FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC--ADEA 156
PNEFSL+ VL +C + G+ +H L +K ++ ++V NAL+++Y+K C + +
Sbjct: 348 VVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAK-CRNMENS 406
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
++F ++ N +SWN++I + C+ FA E+AL +F++++ +
Sbjct: 407 LEIFRSLRDANEVSWNTIIVGY--CQ------SGFA-----EDALSVFQEMRAAHVLSTQ 453
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TFS VL+ACA + +H +HSLI K F +DT++ N+LI YA+CG I + +VF+
Sbjct: 454 VTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFES 513
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEG 333
+ D+VSWN+I+ YALHG+A +AL+LF+ MN +P+ TFV+LLS C GLV +G
Sbjct: 514 IIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQG 573
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+F+SM +H + P +DHY C+V LLGR GR+ +A K I ++P P ++W LL SC
Sbjct: 574 LSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCV 633
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H L + +A K+ ++EP D +V +SN+Y +G ++ L+RK M+ V+K GL
Sbjct: 634 VHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGL 693
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SW+EI+ VH F+ G HP I LE L + GYVP+ ++ LHD++EE K
Sbjct: 694 SWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARM 753
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L+ HSE+LAL + + S+ IRIMKN+R C+DCH K+ S ++ +EIVVRD N
Sbjct: 754 LWVHSERLALAYGL----SMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDIN 809
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF + ICSC DYW
Sbjct: 810 RFHHFDEGICSCGDYW 825
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 189/395 (47%), Gaps = 25/395 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A L C G+ + +H ++ D F N L+N+YAK G L AR LFD M
Sbjct: 51 ARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGM 110
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHGK---- 123
P+RN+VS+ L+ GYA G EE LF L + N F L ++L +
Sbjct: 111 PERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTC 170
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA A K D + +V ++LI+ YS A A VF+ + +++ ++W +M++ +
Sbjct: 171 CIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSEND 230
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ A+ F+KM+ G P+ + VLKA L + +H
Sbjct: 231 IPEDALNTFSKMR-------------MAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCA 277
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K + + + AL+ YA+CG I ++ VF+ + + D++ W+ ++ YA Q ++A
Sbjct: 278 VKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAF 337
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
++F M +V P+ + +L AC++ + G ++ H+++ G +L ++D+
Sbjct: 338 EMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQI-HNLVIKLGYESELFVGNALMDV 396
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIW-SVLLGSCR 393
+ + + ++ R + + + V W ++++G C+
Sbjct: 397 YAKCRNMENSLEIFRSL-RDANEVSWNTIIVGYCQ 430
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 164/349 (46%), Gaps = 32/349 (9%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA + Q+H +I +LFV N L+++YAK ++++ +F +
Sbjct: 358 VLQACANVAFLDLGQQIHNLVIK--LGYESELFVGNALMDVYAKCRNMENSLEIFRSLRD 415
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKLV 125
N VSW +I GY Q G AE+ +F + + + + +SVL +C H +
Sbjct: 416 ANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQI 475
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H+L K + + V N+LI+ Y+K C +A KVFE++ +V+SWN++I+ + L
Sbjct: 476 HSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGY---ALH 532
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLI 242
+A +AL LF ++ + P+ TF +L C GLV + S +S+
Sbjct: 533 GRA----------TDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQ-GLSLFNSMT 581
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLS-KQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + ++ R G ++ + K + D + + W ++L + +H A
Sbjct: 582 MDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNV--A 639
Query: 302 LQLFSN---MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
L FS + ++P D T+V L + + AG++ + + SM N GV
Sbjct: 640 LGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSM-RNIGV 687
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 142/296 (47%), Gaps = 29/296 (9%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHV--YVANALINMYSK-SCADEAWK 158
+ ++ A +L C D G+ VHA ++ A + + AN L+N+Y+K A +
Sbjct: 46 DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F+ M RN++S+ +++ + A EEA LFR+LQREG +
Sbjct: 106 LFDGMPERNMVSFVTLVQGY-------------ALRGGFEEAAGLFRRLQREGHEVNHFV 152
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+ +LK + +H+ K G + + + ++LI AY+ CG++S ++ VFD +
Sbjct: 153 LTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGII 212
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSA--CSHAGLVQEG 333
+ D V+W +++ Y+ + ++AL FS M + +P+ S+L A C + ++ +G
Sbjct: 213 WKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKG 272
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
H + ++D+ + G I +A + +P + D ++WS L+
Sbjct: 273 ---IHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHD-DVILWSFLI 324
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 4 STQI-YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
STQ+ ++++ ACA +IK +Q+H + + N D V N LI+ YAK G + DA
Sbjct: 451 STQVTFSSVLRACANTASIKHTVQIHSLIEKSTFN--NDTIVCNSLIDTYAKCGCIRDAL 508
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC 117
+F+ + + +VVSW A+ISGYA HG A + LF + + PN+ + ++L C
Sbjct: 509 KVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVC 564
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/596 (39%), Positives = 352/596 (59%), Gaps = 31/596 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
S + +A + C L G +K+ + + N +D+ N +I YA+ G +D+
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN-VRDVVSWNTIITGYAQSGKIDE 268
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL 120
AR LFDE P ++V +WTA++SGY Q+ EE LF + + NE S ++L Y+
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER---NEVSWNAMLAG--YV 323
Query: 121 HGKLVHALALKFSLDA--HVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G+ + F + +V N +I Y++ C EA +F+ M R+ +SW +MIA
Sbjct: 324 QGERMEMAKELFDVMPCRNVSTWNTMITGYAQ-CGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ +Q+ F EAL LF Q++REG + +FS L CA +V
Sbjct: 383 GY------SQSGHSF-------EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGK 429
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H + K G+E + NAL+ Y +CGSI + +F +M D+VSWN+++ Y+ HG
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+ AL+ F +M ++PD AT V++LSACSH GLV +G + F++M +++GV+P HY
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHY 549
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
ACMVDLLGR G + +A L++ MP EPD+ IW LLG+ R HG T LAE AA K+ +EP
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+S +V +SN+Y SG + +R M+ V+K PG SWIEI+N+ H F+ G + HP
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHP 669
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+++ IF LEEL ++K GYV +TS+ LHD+EEE KE + +HSE+LA+ + IM S
Sbjct: 670 EKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSS- 728
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN+R+C DCHN +K + + G+ I++RD+NRFHHFKD CSC DYW
Sbjct: 729 ---GRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 195/415 (46%), Gaps = 62/415 (14%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ +A +L E M +D+ N +++ YA+ G +DDAR +FD MP++N VSW AL
Sbjct: 141 NLGKARELFEIM------PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG------KLVHALALKFS 133
+S Y Q+ EE LF S + L+S + L G K+V A S
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENW----------ALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 134 LDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
++ V+ N +I Y++S DEA ++F+ ++V +W +M++ + ++ +A ELF
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 192 AKMKNEEEA-----LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
KM E L + Q +R MA + F ++ C + T
Sbjct: 305 DKMPERNEVSWNAMLAGYVQGERMEMAKE--LFDVM--PCRNVST--------------- 345
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
N +I YA+CG IS +K +FDKM D VSW +++ Y+ G + EAL+LF
Sbjct: 346 -------WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 307 NMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M + + ++F S LS C+ ++ G K H L G ++ + +
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELG-KQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEPGDS 416
G I EA L +EM + D V W+ ++ +H GE L + K + L+P D+
Sbjct: 458 GSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 173/420 (41%), Gaps = 95/420 (22%)
Query: 13 HACALHGNIKQAMQLHEHMINNFPNEP------QDLFVTNHLINMYAKFGYLDDARHLFD 66
H A ++K+A Q I +P D+ N I+ Y + G ++A +F
Sbjct: 32 HGAANFHSLKRATQTQ---IQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFK 88
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVH 126
MP+ + VS+ +ISGY ++G E +LF + + + +V+I + L
Sbjct: 89 RMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPE----RDLVSWNVMIKGYVRNRNLGK 144
Query: 127 ALAL-KFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A L + + V N +++ Y+++ C D+A VF+ M +N +SWN++++A
Sbjct: 145 ARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA------- 197
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ + EEA LF+ + +W S
Sbjct: 198 ------YVQNSKMEEACMLFKSRE------NWALVSW----------------------- 222
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
N L+ + + I ++Q FD M D+VSWN+I+ YA G+ EA QL
Sbjct: 223 ----------NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 305 FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH-------------------- 344
F VQ D T+ +++S +V+E ++F M E +
Sbjct: 273 FDESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMA 331
Query: 345 ----GVVP--QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
V+P + + M+ + G+I EA+ L +MP + D V W+ ++ + G +
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHS 390
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/565 (40%), Positives = 344/565 (60%), Gaps = 31/565 (5%)
Query: 35 FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
+ EP V L++MYAK G ++DA +F+ +P +V+ W+ LIS YAQ E+ F
Sbjct: 280 YDTEPH---VGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFE 336
Query: 95 LFCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYS 149
+F +++ F PNEFSL+ VL +C + G+ +H LA+K ++ ++V NAL++MY+
Sbjct: 337 MFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYA 396
Query: 150 KSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K C + + ++F +++ N +SWN++I + C+ FA E+AL +F ++
Sbjct: 397 K-CRNMENSLEIFSSLQDANEVSWNTIIVGY--CQ------SGFA-----EDALSVFHEM 442
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ M TFS VL+ACA + +HA +HSLI K F +DT++ N+LI YA+CG I
Sbjct: 443 RAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFI 502
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSAC 324
+ +VF+ + D+VSWNSI+ AYALHG+A AL+LF MN ++ + TFVSLLS C
Sbjct: 503 RDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVC 562
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
GLV +G +F+SM+ +H + P ++HY C+V LLGR GR+ +A K I ++P P ++
Sbjct: 563 GSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMV 622
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LL SC H L AA K+ +EP D +V +SN+Y +G ++ L RK M+
Sbjct: 623 WRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRN 682
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
V+K GLSW+EI+ VH F+ G HP I LE L + GYVP+ ++ LHD
Sbjct: 683 VGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHD 742
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
++EE K L+ HSE+LAL + + S+ IRIMKN+R C+DCH K+ S ++
Sbjct: 743 VDEEEKARMLWVHSERLALAYGL----SMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQ 798
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD NRFHHF++ ICSC DYW
Sbjct: 799 REIIVRDINRFHHFEEGICSCGDYW 823
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 182/396 (45%), Gaps = 25/396 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A C G+ + +H ++ D F N L+N YAK G L AR LFD M
Sbjct: 49 ARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGM 108
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLAS---VLISCDYLHGKL 124
P+RN VS+ L+ GYA G EE LF L + N F L + VL++ D
Sbjct: 109 PERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLAC 168
Query: 125 -VHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA A K D + +V ALI+ YS A A VF+ + ++ ++W +M++ +
Sbjct: 169 GIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSEND 228
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ A+ F+KM+ G P+ + LKA L + +H
Sbjct: 229 IPEYALNTFSKMR-------------MTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCS 275
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K ++ + + AL+ YA+CG I + +F+ + + D++ W+ ++ YA Q ++A
Sbjct: 276 VKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAF 335
Query: 303 QLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
++F M V P+ + +L AC++ ++ G ++ H++ G +L ++D+
Sbjct: 336 EMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQI-HNLAIKLGYESELFVGNALMDM 394
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIW-SVLLGSCRK 394
+ R +E I + + V W ++++G C+
Sbjct: 395 YAKC-RNMENSLEIFSSLQDANEVSWNTIIVGYCQS 429
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 157/336 (46%), Gaps = 33/336 (9%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA ++ Q+H I +LFV N L++MYAK ++++ +F +
Sbjct: 356 VLQACANIAFLELGEQIHNLAIK--LGYESELFVGNALMDMYAKCRNMENSLEIFSSLQD 413
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKLV 125
N VSW +I GY Q G AE+ +F + + + + +SVL +C H +
Sbjct: 414 ANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQI 473
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKL 183
H+L K + + V N+LI+ Y+K C +A KVFE++ +V+SWNS+I+A+
Sbjct: 474 HSLIEKSTFNNDTIVCNSLIDTYAK-CGFIRDALKVFESIVECDVVSWNSIISAYALHGR 532
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSL 241
A+ELF +M + + + TF +L C GLV + +S+
Sbjct: 533 ATNALELFDRMNKSD-------------IKANDVTFVSLLSVCGSTGLVNQ-GLWLFNSM 578
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLS-KQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ + + ++ R G ++ + K + D + + W ++L + +H
Sbjct: 579 MMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNV-- 636
Query: 301 ALQLFSN---MNVQP-DSATFVSLLSACSHAGLVQE 332
AL ++ ++++P D T+V L + + AG++ E
Sbjct: 637 ALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDE 672
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 4 STQI-YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
STQ+ ++++ ACA +IK A+Q+H + + N D V N LI+ YAK G++ DA
Sbjct: 449 STQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFN--NDTIVCNSLIDTYAKCGFIRDAL 506
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
+F+ + + +VVSW ++IS YA HG A LF
Sbjct: 507 KVFESIVECDVVSWNSIISAYALHGRATNALELF 540
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/590 (39%), Positives = 351/590 (59%), Gaps = 42/590 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLI------NMYAKFGYLDD 60
+Y+ L C G ++Q +H H++++ F+ NHL+ NMYAK G LDD
Sbjct: 89 LYSKLLKECTRLGKVEQGRIVHAHLVDSH-------FLDNHLVLQNIIVNMYAKCGCLDD 141
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
AR +FDEMP +++V+WTALI+G++Q+ + LF +L+ F PN F+L+S+L +
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS 201
Query: 120 LHG----KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNS 173
HG +HA LK+ + VYV +AL++MY++ C D A F+ M ++ +SWN+
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYAR-CGHMDAAQLAFDGMPTKSEVSWNA 260
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I+ A+ E AL L ++QR+ P T+S VL ACA +
Sbjct: 261 LISGH-------------ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALE 307
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH+ + K G + I N L+ YA+ GSI +K+VFD++ D+VSWN++L A
Sbjct: 308 QGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCA 367
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG KE L F M ++P+ +F+ +L+ACSH+GL+ EG F +++ + V P +
Sbjct: 368 QHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDV 426
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
HY VDLLGRVG + AE+ IREMP+EP + +W LLG+CR H L AA + +
Sbjct: 427 PHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFE 486
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
L+P DS + +SNIY +G + +RK MK S V+K P SW+EIEN VH F + +
Sbjct: 487 LDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDE 546
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP+ + I K EE+ G++K +GYVP+TS L ++++ +EE+L +HSEKLAL FA++N
Sbjct: 547 THPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNT 606
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
+ S IRI KNIR+C DCH +K S ++ +EI+VRD+NRFH F+D
Sbjct: 607 PT----GSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRD 652
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 8/220 (3%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS-LIAKYGFEDDTVIANALI 258
L+ +QR + PD+ +S +LK C L VH+ L+ + ++ V+ N ++
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
+ YA+CG + ++++FD+M D+V+W +++ ++ + + ++AL LF M QP+
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T SLL A + G ++ H+ +G + + +VD+ R G + A+
Sbjct: 191 TLSSLLKASGSEHGLDPGTQL-HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 376 MPMEPDSVIWSVLL-GSCRK-HGETRLAELAATKLKQLEP 413
MP + + V W+ L+ G RK GE L L + K +P
Sbjct: 250 MPTKSE-VSWNALISGHARKGEGEHALHLLWKMQRKNFQP 288
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 256 ALIHAYARCGSISLSKQV--FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
A IHA A S S +V D ++ + + K+ + G AL L ++ PD
Sbjct: 27 ATIHAPAAPFSDSNDSEVEDGDAASFCVFQDKDLLRKSQSDGGTGLYALDLIQRGSLVPD 86
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
+ LL C+ G V++G V ++++H + L +V++ + G + +A ++
Sbjct: 87 YNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMF 146
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
EMP + D V W+ L+ ++ R A L ++ +L G +S++ SGS
Sbjct: 147 DEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQMLRL--GFQPNHFTLSSLLKASGS 201
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/616 (37%), Positives = 346/616 (56%), Gaps = 42/616 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +L ++C + + ++H H+ D+ V N LI MY K + DAR FD
Sbjct: 283 FVSLLNSCNTPEALNRGRRIHSHISER--GLETDVVVANALITMYCKCNCIQDARETFDR 340
Query: 68 MPKRNVVSWTALISGYAQHG-----NAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH 121
M KR+V+SW+A+I+GYAQ G + +E F+L + + FPN+ + S+L +C +H
Sbjct: 341 MSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACS-VH 399
Query: 122 GKL-----VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSM 174
G L +HA K ++ + A+ NMY+K C EA +VF ME +NV++W S+
Sbjct: 400 GALEQGRQIHAEISKVGFESDRSLQTAIFNMYAK-CGSIYEAEQVFSKMENKNVVAWASL 458
Query: 175 IAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDW 216
+ + C A ++F++M + L ++ EG PD
Sbjct: 459 LTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDR 518
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T +L+AC L VH+ K G E DTV+A +LI Y++CG ++ ++ VFDK
Sbjct: 519 VTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDK 578
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
++ D V+WN++L Y HG EA+ LF M V P+ TF +++SAC AGLVQEG
Sbjct: 579 ISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEG 638
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
++F M E+ + P HY CMVDLLGR GR+ EAE+ I+ MP EPD +W LLG+C+
Sbjct: 639 REIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACK 698
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H +LAE AA + +LEP ++ +V +SNIY +G ++ + +RK M ++K G
Sbjct: 699 SHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGE 758
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S IEI+ R+H F + HP+ ++I +LE L ++K GY P+ LHD++E KE
Sbjct: 759 SSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERA 818
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HHSEKLA+ + ++ + IRIMKN+R+C DCH K S + +EIV RD+N
Sbjct: 819 LCHHSEKLAIAYGLLKTPP----GTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDAN 874
Query: 574 RFHHFKDRICSCNDYW 589
RFH+FK+ CSC D+W
Sbjct: 875 RFHYFKNGTCSCGDFW 890
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 231/486 (47%), Gaps = 54/486 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC + +++A ++H + D+ V LI MY+K G + A +F +
Sbjct: 182 FLSILKACNNYSMLEKAREIH--TVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HG 122
M +RNVVSWTA+I AQH E F L+ +LQ PN + S+L SC+ G
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRG 299
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H+ + L+ V VANALI MY K +C +A + F+ M R+VISW++MIA +
Sbjct: 300 RRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY--- 356
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A + ++ +E L +++REG+ P+ TF +LKAC+ +H+
Sbjct: 357 -----AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAE 411
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK------------------------- 276
I+K GFE D + A+ + YA+CGSI ++QVF K
Sbjct: 412 ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSA 471
Query: 277 ------MTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHA 327
M+ ++VSWN ++ YA G + +L S+M V QPD T +S+L AC
Sbjct: 472 EKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGAL 531
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
++ G K+ H+ G+ ++ + + G + EA + ++ D+V W+
Sbjct: 532 SALERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDTVAWNA 589
Query: 388 LLGSCRKHG-ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
+L +HG +L LK+ P + + F + + +G + R I + M+
Sbjct: 590 MLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQ-ED 648
Query: 447 VRKYPG 452
R PG
Sbjct: 649 FRMKPG 654
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 196/377 (51%), Gaps = 31/377 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+++ N LIN Y+KFG + +F M R+VV+W+++I+ YA + + + F F +
Sbjct: 112 DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171
Query: 101 QYFF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
PN + S+L +C+ + +H + ++ V VA ALI MYSK C +
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSK-CGEI 230
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A ++F+ M+ RNV+SW ++I A A+ + EA L+ ++ + G++
Sbjct: 231 SLACEIFQKMKERNVVSWTAIIQA-------------NAQHRKLNEAFELYEKMLQAGIS 277
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ TF +L +C +HS I++ G E D V+ANALI Y +C I +++
Sbjct: 278 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARET 337
Query: 274 FDKMTYHDLVSWNSILKAYALHG-QAKEAL----QLFSNM---NVQPDSATFVSLLSACS 325
FD+M+ D++SW++++ YA G Q KE+L QL M V P+ TF+S+L ACS
Sbjct: 338 FDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACS 397
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G +++G ++ H+ + G + ++ + G I EAE++ +M + V W
Sbjct: 398 VHGALEQGRQI-HAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAW 455
Query: 386 SVLLGSCRKHGETRLAE 402
+ LL K G+ AE
Sbjct: 456 ASLLTMYIKCGDLTSAE 472
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 19/279 (6%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK+VH + L +Y+ N+LIN YSK +VF M R+V++W+SMIAA+
Sbjct: 97 GKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAG 156
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+A + F +MK+ + P+ TF +LKAC A +H+
Sbjct: 157 NNHPAKAFDTFERMKDAN-------------IEPNRITFLSILKACNNYSMLEKAREIHT 203
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
++ G E D +A ALI Y++CG ISL+ ++F KM ++VSW +I++A A H + E
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A +L+ M + P++ TFVSLL++C+ + G ++ HS + G+ + ++
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRI-HSHISERGLETDVVVANALI 322
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + I +A + M + D + WS ++ + G
Sbjct: 323 TMYCKCNCIQDARETFDRMS-KRDVISWSAMIAGYAQSG 360
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 131/247 (53%), Gaps = 10/247 (4%)
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
+EA+ L +++ G+ + T+ +++ CA L VH + + G D + N+L
Sbjct: 60 KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
I+ Y++ G ++ +QVF +MT D+V+W+S++ AYA + +A F M N++P+
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
TF+S+L AC++ ++++ ++ H++++ G+ + ++ + + G I A ++ +
Sbjct: 180 ITFLSILKACNNYSMLEKAREI-HTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG---DSLGFVQMSNIYCLSGS 431
+M E + V W+ ++ + +H +L E K L+ G +++ FV + N +
Sbjct: 239 KMK-ERNVVSWTAIIQANAQH--RKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295
Query: 432 FNKARLI 438
N+ R I
Sbjct: 296 LNRGRRI 302
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/628 (38%), Positives = 352/628 (56%), Gaps = 62/628 (9%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK--------- 54
S ++Y+TL AC H ++ ++H H N +F++N L++MYAK
Sbjct: 86 SARVYSTLIAACVRHRALELGRRVHAH--TKASNFVPGVFISNRLLDMYAKCGSLVDAQM 143
Query: 55 ----------------------FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEEC 92
G L+ AR LFDEMP+R+ SW A ISGY H E
Sbjct: 144 LFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREA 203
Query: 93 FRLFCSLLQY-------FFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALI 145
LF + ++ F + AS I C L GK +H ++ L+ V +AL+
Sbjct: 204 LELFRVMQRHERSSSNKFTLSSALAASAAIPCLRL-GKEIHGYLIRTELNLDEVVWSALL 262
Query: 146 NMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
++Y K + DEA +F+ M+ R+V+SW +MI C + + EE LF
Sbjct: 263 DLYGKCGSLDEARGIFDQMKDRDVVSWTTMI---HRCFEDGR----------REEGFLLF 309
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
R L + G+ P+ TF+ VL ACA E VH + G++ + +AL+H Y++C
Sbjct: 310 RDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKC 369
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLL 321
G+ ++++VF++M DLVSW S++ YA +GQ EAL F +PD T+V +L
Sbjct: 370 GNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVL 429
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
SAC+HAGLV +G + FHS+ E HG++ DHYAC++DLL R GR EAE +I MP++PD
Sbjct: 430 SACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPD 489
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
+W+ LLG CR HG LA+ AA L ++EP + ++ ++NIY +G +++ +RK+
Sbjct: 490 KFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKD 549
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
M + K PG SWIEI+ +VH F G HP+ I + L EL ++K GYVP+T+
Sbjct: 550 MDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFV 609
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
LHD+EEE KE+ L +HSEKLA+VF I++ + I++ KN+R CVDCH +K S
Sbjct: 610 LHDVEEEQKEQNLVYHSEKLAVVFGIISTPP----GTPIKVFKNLRTCVDCHTAIKYISK 665
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ ++I VRDSNRFH F+D CSC DYW
Sbjct: 666 IVQRKITVRDSNRFHCFEDGSCSCKDYW 693
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/592 (39%), Positives = 353/592 (59%), Gaps = 41/592 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + G I +A +L + M +D+ ++I Y + G L +AR LFDE
Sbjct: 225 WTVMLGGLLQEGRIDEACRLFDMM------PEKDVVTRTNMIGGYCQVGRLVEARMLFDE 278
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVL---ISCDYLH--G 122
MP+RNVVSWT +I+GY Q+ + +LF + + NE S ++L +C L
Sbjct: 279 MPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE---KNEVSWTAMLKGYTNCGRLDEAS 335
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+L +A+ +K V NA+I + ++ +A +VF+ M ++ +W++MI +
Sbjct: 336 ELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVY--- 387
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
E + +EL +AL LFR +QREG+ P++ + VL CAGL H +H+
Sbjct: 388 --ERKGLEL--------DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 437
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + F+ D +A+ L+ Y +CG+++ +KQVFD+ D+V WNSI+ YA HG EA
Sbjct: 438 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEA 497
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L++F +M + PD TFV +LSACS+ G V++G ++F+SM + V +++HYACMVD
Sbjct: 498 LRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVD 557
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G++ EA LI +MPME D++IW LLG+CR H + LAE+AA KL LEP ++
Sbjct: 558 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP 617
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR-HPQREA 477
F+ +SNIY G ++ +R+ M+ RV KYPG SWI +E +VH+F G HP+
Sbjct: 618 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 677
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I + LE L G L+ GY P+ S LHD++EE K + L +HSEKLA+ + ++
Sbjct: 678 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLK----IPIG 733
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+R+C DCH +KL + + G+EI++RD+NRFHHFKD CSC DYW
Sbjct: 734 MPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 155/355 (43%), Gaps = 69/355 (19%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP 105
N LI Y++ G ++ AR +FDEM +N++SW ++++GY Q+ +E +F
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMF--------- 152
Query: 106 NEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEF 165
K+ + ++ Y+ N +IN EA +VF+ M
Sbjct: 153 ----------------DKMSERNTISWNGLVSGYINNGMIN--------EAREVFDRMPE 188
Query: 166 RNVISWNSMIAAFRACKLEAQAIELFAKM--KNEEEALFLFRQLQREGMAPDWCTFSIVL 223
RNV+SW +M+ + + ++A LF +M KN + L +EG + C ++
Sbjct: 189 RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM 248
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
E D V +I Y + G + ++ +FD+M ++V
Sbjct: 249 P-----------------------EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVV 285
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
SW +++ Y + Q A +LF M + + ++ ++L ++ G + E +++F++M
Sbjct: 286 SWTTMITGYVQNQQVDIARKLFEVMP-EKNEVSWTAMLKGYTNCGRLDEASELFNAM--- 341
Query: 344 HGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
P AC M+ G+ G + +A ++ +M E D WS ++ + G
Sbjct: 342 ----PIKSVVACNAMILCFGQNGEVPKARQVFDQM-REKDEGTWSAMIKVYERKG 391
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/592 (39%), Positives = 353/592 (59%), Gaps = 41/592 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + G I +A +L + M +D+ ++I Y + G L +AR LFDE
Sbjct: 225 WTVMLGGLLQEGRIDEACRLFDMM------PEKDVVTRTNMIGGYCQVGRLVEARMLFDE 278
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVL---ISCDYLH--G 122
MP+RNVVSWT +I+GY Q+ + +LF + + NE S ++L +C L
Sbjct: 279 MPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE---KNEVSWTAMLKGYTNCGRLDEAS 335
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+L +A+ +K V NA+I + ++ +A +VF+ M ++ +W++MI +
Sbjct: 336 ELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVY--- 387
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
E + +EL +AL LFR +QREG+ P++ + VL CAGL H +H+
Sbjct: 388 --ERKGLEL--------DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 437
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + F+ D +A+ L+ Y +CG+++ +KQVFD+ D+V WNSI+ YA HG EA
Sbjct: 438 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEA 497
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L++F +M + PD TFV +LSACS+ G V++G ++F+SM + V +++HYACMVD
Sbjct: 498 LRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVD 557
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G++ EA LI +MPME D++IW LLG+CR H + LAE+AA KL LEP ++
Sbjct: 558 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP 617
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR-HPQREA 477
F+ +SNIY G ++ +R+ M+ RV KYPG SWI +E +VH+F G HP+
Sbjct: 618 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 677
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I + LE L G L+ GY P+ S LHD++EE K + L +HSEKLA+ + ++
Sbjct: 678 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLK----IPIG 733
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+R+C DCH +KL + + G+EI++RD+NRFHHFKD CSC DYW
Sbjct: 734 MPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 155/355 (43%), Gaps = 69/355 (19%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP 105
N LI Y++ G ++ AR +FDEM +N++SW ++++GY Q+ +E +F
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMF--------- 152
Query: 106 NEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEF 165
K+ + ++ Y+ N +IN EA +VF+ M
Sbjct: 153 ----------------DKMSERNTISWNGLVSGYINNGMIN--------EAREVFDRMPE 188
Query: 166 RNVISWNSMIAAFRACKLEAQAIELFAKM--KNEEEALFLFRQLQREGMAPDWCTFSIVL 223
RNV+SW +M+ + + ++A LF +M KN + L +EG + C ++
Sbjct: 189 RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM 248
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
E D V +I Y + G + ++ +FD+M ++V
Sbjct: 249 P-----------------------EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVV 285
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
SW +++ Y + Q A +LF M + + ++ ++L ++ G + E +++F++M
Sbjct: 286 SWTTMITGYVQNQQVDIARKLFEVMP-EKNEVSWTAMLKGYTNCGRLDEASELFNAM--- 341
Query: 344 HGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
P AC M+ G+ G + +A ++ +M E D WS ++ + G
Sbjct: 342 ----PIKSVVACNAMILCFGQNGEVPKARQVFDQM-REKDEGTWSAMIKVYERKG 391
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/592 (40%), Positives = 350/592 (59%), Gaps = 32/592 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHLFDE 67
+ ACA + QLH I + D V LINMYAK G + AR +FD+
Sbjct: 277 VISACANMELLLLGQQLHSQAIRH--GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ 334
Query: 68 MPKRNVVSWTALISGYAQHGN-AEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH---- 121
+ NV SWTA+I+GY Q G EE LF + L + PN F+ +S L +C L
Sbjct: 335 ILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRI 394
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ V A+K + VAN+LI+MY++S D+A K F+ + +N+IS+N++I A+
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAY-- 452
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
AK N EEAL LF +++ +GM TF+ +L A + T +H+
Sbjct: 453 -----------AKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G + + + NALI Y+RCG+I + QVF+ M +++SW SI+ +A HG A +
Sbjct: 502 RVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQ 561
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M V+P+ T++++LSACSH GLV EG K F SM HGV+P+++HYACMV
Sbjct: 562 ALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMV 621
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR G + EA + I MP + D+++W LG+CR HG L + AA + + EP D
Sbjct: 622 DILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPA 681
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
++ +SN+Y + +++ IRK MK + K G SW+E+EN+VH+F G HP+
Sbjct: 682 AYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAE 741
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+ +L+ L ++K +GYVP LHD+EEE KE+ L+ HSEK+A+ F +++ +
Sbjct: 742 IYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKM---- 797
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+RIC DCH+ +K S G+EI+VRD+NRFHH KD CSCN+YW
Sbjct: 798 KPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 176/386 (45%), Gaps = 40/386 (10%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y+ C + +HE + + + D N LI++Y+K G + A +F
Sbjct: 67 QTYSLFLKKCIRTRSFDIGTLVHEKLTQS--DLQLDSVTLNSLISLYSKCGQWEKATSIF 124
Query: 66 DEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH-- 121
M R+++SW+A++S +A + F +++ ++PNE+ A+ +C
Sbjct: 125 QLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFV 184
Query: 122 --GKLVHALALKFS-LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIA 176
G + +K L + V V LI+M+ K D A+KVFE M RN ++W MI
Sbjct: 185 SVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMIT 244
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+AI+LF +M G PD T S V+ ACA +
Sbjct: 245 RLMQFGYAGEAIDLFLEMI-------------LSGYEPDRFTLSGVISACANMELLLLGQ 291
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARC---GSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+HS ++G D + LI+ YA+C GS+ ++++FD++ H++ SW +++ Y
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351
Query: 294 LHGQ-AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
G +EAL LF M +V P+ TF S L AC++ ++ G +VF H V
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLG 406
Query: 350 LDHYAC----MVDLLGRVGRILEAEK 371
C ++ + R GRI +A K
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARK 432
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+A+ + +G PD T+S+ LK C + + VH + + + D+V N+LI
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 259 HAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
Y++CG + +F M + DL+SW++++ +A + AL F +M P+
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL--GRVGRILEAEKL 372
F + ACS A V G+ +F +++ + + ++D+ GR G ++ A K+
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGR-GDLVSAFKV 227
Query: 373 IREMPMEPDSVIWSVLLGSCRKHG 396
+MP E ++V W++++ + G
Sbjct: 228 FEKMP-ERNAVTWTLMITRLMQFG 250
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/602 (37%), Positives = 361/602 (59%), Gaps = 39/602 (6%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
+ + ++H ++ N + DL V LINMY K G +AR +FD+M KR++VSW +I
Sbjct: 223 LPEGRKIHAEIVANGFD--SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMI 280
Query: 81 SGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLD 135
Y Q+G+ E L+ L ++ F + + S+L +C + G+LVH+ L+ LD
Sbjct: 281 GCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLD 340
Query: 136 AHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA---CKLEAQAIELF 191
+ V VA AL+NMY+K + +EA KVF M+ R+ ++W+++I A+ + K +A ++F
Sbjct: 341 SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVF 400
Query: 192 AKMKNEEE------------------ALFLFRQLQ-REGMAPDWCTFSIVLKACAGLVTE 232
++ + + A+ +FR++ G+ PD TF VL+ACA L
Sbjct: 401 DRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRL 460
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
A+H+ I++ E + V+ N LI+ YARCGS+ ++++F +VSW +++ A+
Sbjct: 461 SEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAF 520
Query: 293 ALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ +G+ EAL LF M+ V+PD T+ S+L C+H G +++G + F M E HG+ P
Sbjct: 521 SQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPT 580
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
DH+A MVDLLGR GR+ +A++L+ MP EPD V W L +CR HG+ L E AA ++
Sbjct: 581 ADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVY 640
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
+L+P + ++ MSNIY G + K +RK+M+ ++K PGLS+IE++ ++HEF+SGG
Sbjct: 641 ELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGG 700
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM- 528
K HP+ + I ++L L G ++ GYVP+T LHD+ E KE L +HSEK+A+ F ++
Sbjct: 701 KYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVS 760
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF-KDRICSCND 587
++GS IR++KN+R+C DCH K + + G++I++RD NRFH F D CSC D
Sbjct: 761 SRGS----GEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGD 816
Query: 588 YW 589
YW
Sbjct: 817 YW 818
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 236/459 (51%), Gaps = 26/459 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ T+ +C+ G++ + LHE + +D V N LI+MY K L DAR +F+
Sbjct: 10 FLTVLCSCSSCGDVAEGRALHERI--RCSRFERDTMVGNALISMYGKCDSLVDARSVFES 67
Query: 68 MP--KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL-HGK 123
M +RNVVSW A+I+ YAQ+G++ E L+ + LQ + + SVL +C L G+
Sbjct: 68 MDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGR 127
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H LD+ +ANAL+ MY++ +A ++F++++ R+ SWN++I A
Sbjct: 128 EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ A+ +F +MK + M P+ T+ V+ + +H+ I
Sbjct: 188 DWSGALRIFKEMKCD--------------MKPNSTTYINVISGFSTPEVLPEGRKIHAEI 233
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
GF+ D V+A ALI+ Y +CGS +++VFDKM D+VSWN ++ Y +G EAL
Sbjct: 234 VANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEAL 293
Query: 303 QLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+L+ ++++ ATFVS+L ACS + +G ++ HS + G+ ++ +V++
Sbjct: 294 ELYQKLDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNM 352
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
+ G + EA K+ M D+V WS L+G+ +G + A A +L D++ +
Sbjct: 353 YAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICW 411
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
M Y +G A I +EM G+ K +++I +
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 215/455 (47%), Gaps = 69/455 (15%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC+ ++ Q ++H + + + Q L N L+ MYA+FG + DA+ +F
Sbjct: 113 FVSVLGACS---SLAQGREIHNRVFYSGLDSFQSL--ANALVTMYARFGSVGDAKRMFQS 167
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY----LHGK 123
+ R+ SW A+I ++Q G+ R+F + PN + +V+ G+
Sbjct: 168 LQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGR 227
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA + D+ + VA ALINMY K + EA +VF+ M+ R+++SWN MI
Sbjct: 228 KIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGC----- 282
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ + + EAL L+++L EG TF +L AC+ + VHS I
Sbjct: 283 --------YVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI 334
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE-- 300
+ G + + +A AL++ YA+CGS+ +++VF+ M D V+W++++ AYA +G K+
Sbjct: 335 LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDAR 394
Query: 301 --------------------------------ALQLFSNMN----VQPDSATFVSLLSAC 324
A+++F M ++PD+ TF+++L AC
Sbjct: 395 KARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ G + E K H+ + + + ++++ R G + EAE+L E V
Sbjct: 455 ASLGRLSE-VKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLF-AAAKEKTVVS 512
Query: 385 WSVLLGSCRKHGETRLAE----LAATKLKQLEPGD 415
W+ ++ + ++G R AE L+ ++P D
Sbjct: 513 WTAMVAAFSQYG--RYAEALDLFQEMDLEGVKPDD 545
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 162/303 (53%), Gaps = 29/303 (9%)
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWK 158
P+ + +VL SC D G+ +H + V NALI+MY K C +A
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGK-CDSLVDARS 63
Query: 159 VFENMEFR--NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
VFE+M++R NV+SWN+MIAA+ A+ + EAL L+ ++ +G+ D
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAY-------------AQNGHSTEALVLYWRMNLQGLGTDH 110
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TF VL AC+ L R +H+ + G + +ANAL+ YAR GS+ +K++F
Sbjct: 111 VTFVSVLGACSSLAQGRE---IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQS 167
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGN 334
+ D SWN+++ A++ G AL++F M +++P+S T+++++S S ++ EG
Sbjct: 168 LQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGR 227
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
K+ H+ + +G L ++++ G+ G EA ++ +M + D V W+V++G +
Sbjct: 228 KI-HAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMIGCYVQ 285
Query: 395 HGE 397
+G+
Sbjct: 286 NGD 288
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/559 (40%), Positives = 340/559 (60%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV L+ +YAK G + DA+ LF+EMPK +++ W+ +I+ YAQ ++E LF +
Sbjct: 271 DLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMR 330
Query: 101 QY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
Q PN F+ ASVL +C GK +H+ LKF L+++V+V+NA++++Y+K C +
Sbjct: 331 QTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAK-CGEI 389
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ K+FE + RN ++WN++I + ++ + E A+ LF + M
Sbjct: 390 ENSMKLFEELPDRNDVTWNTIIVGY-------------VQLGDGERAMNLFTHMLEHDMQ 436
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P T+S VL+A A L +HSL K + DTV+AN+LI YA+CG I+ ++
Sbjct: 437 PTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLT 496
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FDKM D VSWN+++ Y++HG + EAL LF M + +P+ TFV +LSACS+AGL+
Sbjct: 497 FDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLL 556
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+G F SM +++ + P ++HY CMV LLGR+GR EA KLI E+ +P ++W LLG
Sbjct: 557 YKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLG 616
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+C H + L + A + ++EP D V +SN+Y +G ++ +RK M+ +VRK
Sbjct: 617 ACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKE 676
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PGLSW+E + VH F+ G HP + I LE L + + GYVP+ + L D++++ K
Sbjct: 677 PGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEK 736
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E L+ HSE+LAL + ++ C IRI+KN+RIC+DCH MKL S ++ +EIV+R
Sbjct: 737 ERHLWVHSERLALAYGLIRTPLSCS----IRIIKNLRICIDCHTVMKLISKVVQREIVIR 792
Query: 571 DSNRFHHFKDRICSCNDYW 589
D NRFHHF+ +CSC DYW
Sbjct: 793 DINRFHHFRHGVCSCGDYW 811
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 212/473 (44%), Gaps = 65/473 (13%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
LH H++ DLF N L+N Y + L DA LFDEMP+ N +S+ L GY++
Sbjct: 57 LHCHILKR--GTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRD 114
Query: 87 GNAEECFRLFCSLLQYFFP-NEF---SLASVLISCDYLH-GKLVHALALKFSLDAHVYVA 141
+ + + N F +L +L+S D H +HA K A +V
Sbjct: 115 HQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVG 174
Query: 142 NALINMYS-KSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
ALI+ YS + D A VF+++ ++++SW M+A + A+ EE+
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACY-------------AENCFYEES 221
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LF Q++ G P+ T S LK+C GL +VH K ++ D + AL+
Sbjct: 222 LQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLEL 281
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
YA+ G I ++++F++M DL+ W+ ++ YA ++KEAL LF M +V P++ TF
Sbjct: 282 YAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTF 341
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
S+L AC+ + + G ++ HS + G+ + ++D+ + G I + KL E+P
Sbjct: 342 ASVLQACASSVSLDLGKQI-HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAEL---------------------AATKLKQLEPG-- 414
D ++++G + R L A+ L LEPG
Sbjct: 401 DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ 460
Query: 415 ------------DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
D++ + ++Y G N ARL +M K +SW
Sbjct: 461 IHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN-----KRDEVSW 508
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 346/580 (59%), Gaps = 28/580 (4%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N++ +H ++I N NE + T L++MYAK G+L AR LF+ + ++ VVSWTA+
Sbjct: 210 NMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAM 269
Query: 80 ISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
I+G + EE +LF + + FPNE ++ S+++ C + GK +HA L+
Sbjct: 270 IAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF 329
Query: 135 DAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ +A AL++MY K C+D A +F++ + R+V+ W +M++A+ A
Sbjct: 330 SVSLALATALVDMYGK-CSDIRNARALFDSTQNRDVMIWTAMLSAY-------------A 375
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ ++A LF Q++ G+ P T +L CA VHS I K E D +
Sbjct: 376 QANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCI 435
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ AL+ YA+CG I+ + ++F + D+ WN+I+ +A+HG +EAL +F+ M
Sbjct: 436 LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQG 495
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
V+P+ TF+ LL ACSHAGLV EG K+F M+ G+VPQ++HY CMVDLLGR G + EA
Sbjct: 496 VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEA 555
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
++I+ MP++P++++W L+ +CR H +L ELAAT+L ++EP + V MSNIY +
Sbjct: 556 HEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAA 615
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
++ A +RK MK ++K PG S IE+ VHEF G + HPQ I + L E+ +L
Sbjct: 616 NRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKL 675
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRIC 549
GYVP+TS L +I+EE KE L +HSEKLA+ F +++ + IRI+KN+R+C
Sbjct: 676 NEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAP----STPIRIVKNLRVC 731
Query: 550 VDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH KL S + G+ I+VRD NRFHHF++ CSC DYW
Sbjct: 732 NDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 187/391 (47%), Gaps = 32/391 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+FV N L+ MY + ++ AR +FD+M +R+VVSW+ +I +++ + L +
Sbjct: 127 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 186
Query: 100 -LQYFFPNEFSLASVL----ISCDYLHGKLVHALALKFSLDAHVYV--ANALINMYSKSC 152
P+E ++ S++ + + GK +HA ++ S + H+ V AL++MY+K C
Sbjct: 187 NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAK-C 245
Query: 153 A--DEAWKVFENMEFRNVISWNSMIAA-FRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
A ++F + + V+SW +MIA R+ +L EE LF ++Q
Sbjct: 246 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL--------------EEGTKLFIRMQE 291
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
E + P+ T ++ C + +H+ I + GF +A AL+ Y +C I
Sbjct: 292 ENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRN 351
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++ +FD D++ W ++L AYA +A LF M V+P T VSLLS C+
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
AG + G K HS ++ V +VD+ + G I A +L E + D +W+
Sbjct: 412 AGALDLG-KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWN 469
Query: 387 VLLGSCRKH--GETRLAELAATKLKQLEPGD 415
++ H GE L A + + ++P D
Sbjct: 470 AIITGFAMHGYGEEALDIFAEMERQGVKPND 500
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 25/294 (8%)
Query: 108 FSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFEN 162
F SVL +C + GK +H LK LD V+V NAL+ MY + +C + A VF+
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
M R+V+SW++MI + K A+EL +M F Q++ P +
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMN--------FMQVR-----PSEVAMVSM 201
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVI--ANALIHAYARCGSISLSKQVFDKMTYH 280
+ A R A+H+ + + + + AL+ YA+CG + L++Q+F+ +T
Sbjct: 202 VNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQK 261
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+VSW +++ + +E +LF M N+ P+ T +SL+ C G +Q G K
Sbjct: 262 TVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLG-KQL 320
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
H+ + +G L +VD+ G+ I A L + D +IW+ +L +
Sbjct: 321 HAYILRNGFSVSLALATALVDMYGKCSDIRNARALF-DSTQNRDVMIWTAMLSA 373
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
MAP VLKAC + + +H + K G + D + NAL+ Y C + ++
Sbjct: 96 MAPS------VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYAR 149
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAG 328
VFDKM D+VSW++++++ + + + AL+L MN V+P VS+++ +
Sbjct: 150 LVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTA 209
Query: 329 LVQEGNKVFHSMLEN----HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
++ G + ++ N H VP ++D+ + G + A +L + + V
Sbjct: 210 NMRMGKAMHAYVIRNSNNEHMGVPTT---TALLDMYAKCGHLGLARQLFNGLT-QKTVVS 265
Query: 385 WSVLLGSCRKHGETRLAELAATKL 408
W+ ++ C + RL E TKL
Sbjct: 266 WTAMIAGCIR--SNRLEE--GTKL 285
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L HAC+ G + + +L E M++ F PQ + ++++ + G LD+A +
Sbjct: 503 FIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQ-IEHYGCMVDLLGRAGLLDEAHEMIKS 561
Query: 68 MP-KRNVVSWTALISGYAQHGNAE 90
MP K N + W AL++ H N +
Sbjct: 562 MPIKPNTIVWGALVAACRLHKNPQ 585
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/615 (36%), Positives = 345/615 (56%), Gaps = 40/615 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +L ++C + + ++H H+ D+ V N LI MY K + +AR +FD
Sbjct: 261 FVSLLNSCNTPEALNRGRRIHSHISER--GLETDMIVANALITMYCKCNSVQEAREIFDR 318
Query: 68 MPKRNVVSWTALISGYAQHG-----NAEECFRLFCSLL-QYFFPNEFSLASVLISCD--- 118
M KR+V+SW+A+I+GYAQ G + +E F+L + + FPN+ + S+L +C
Sbjct: 319 MSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHG 378
Query: 119 -YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
G+ +HA K + + A+ NMY+K C EA +VF M +NV++W S +
Sbjct: 379 ALEQGRQIHAELSKVGFELDRSLQTAIFNMYAK-CGSIYEAEQVFSKMANKNVVAWTSFL 437
Query: 176 AAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWC 217
+ + C + A ++F++M + L ++ EG PD
Sbjct: 438 SMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRV 497
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T +L+AC L VH+ K G E DTV+A +LI Y++CG ++ ++ VFDKM
Sbjct: 498 TVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKM 557
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ D V+WN++L Y HG EA+ LF M V P+ T +++SACS AGLVQEG
Sbjct: 558 SNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGR 617
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F M E+ + P+ HY CMVDLLGR GR+ EAE+ I+ MP EPD +W LLG+C+
Sbjct: 618 EIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKS 677
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H +LAE AA + +LEP + ++ +SNIY +G ++ + +R+ M ++K G S
Sbjct: 678 HNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGES 737
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
IEI+ R+H F + HP+ +AI +LE L ++K GY P+ LHD+++ KE+ L
Sbjct: 738 SIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKAL 797
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HHSEKLA+ + ++ S + IRIMKN+R+C DCH K S + +EIV RD+NR
Sbjct: 798 CHHSEKLAIAYGLLKTPS----GTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANR 853
Query: 575 FHHFKDRICSCNDYW 589
FH+F + CSC D+W
Sbjct: 854 FHYFNNGTCSCGDFW 868
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 209/431 (48%), Gaps = 54/431 (12%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC + +++ ++H I D+ V LI MY+K G + A +F +
Sbjct: 160 FLSILKACNNYSILEKGRKIH--TIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HG 122
M +RNVVSWTA+I AQH E F L+ +LQ PN + S+L SC+ G
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H+ + L+ + VANALI MY K + EA ++F+ M R+VISW++MIA +
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGY--- 334
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A + ++ +E L +++REG+ P+ TF +L+AC +H+
Sbjct: 335 -----AQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAE 389
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT----------------------- 278
++K GFE D + A+ + YA+CGSI ++QVF KM
Sbjct: 390 LSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSA 449
Query: 279 --------YHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSH- 326
++VSWN ++ YA +G + +L S+M QPD T +++L AC
Sbjct: 450 EKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGAL 509
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
AGL E K+ H+ G+ ++ + + G++ EA + +M D+V W+
Sbjct: 510 AGL--ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTVAWN 566
Query: 387 VLLGSCRKHGE 397
+L +HG+
Sbjct: 567 AMLAGYGQHGD 577
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 205/417 (49%), Gaps = 33/417 (7%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L ++ Y + CA + +H+ + + D+++ N LIN Y+KF +
Sbjct: 52 LLVNSNTYGCVIEHCAKARRFEDGKMVHKQL--DELGVEIDIYLGNSLINFYSKFEDVAS 109
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
A +F M R+VV+W+++I+ YA + + + F F + PN + S+L +C+
Sbjct: 110 AEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNN 169
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
G+ +H + ++ V VA ALI MYSK C + A +VF M RNV+SW +
Sbjct: 170 YSILEKGRKIHTIVKAMGMETDVAVATALITMYSK-CGEISVACEVFHKMTERNVVSWTA 228
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I A A+ + EA L+ Q+ + G++P+ TF +L +C
Sbjct: 229 IIQA-------------NAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALN 275
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+HS I++ G E D ++ANALI Y +C S+ ++++FD+M+ D++SW++++ YA
Sbjct: 276 RGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYA 335
Query: 294 LHG-----QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
G E QL M V P+ TF+S+L AC+ G +++G ++ H+ L G
Sbjct: 336 QSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQI-HAELSKVG 394
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
+ ++ + G I EAE++ +M + V W+ L K G+ AE
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLSMYIKCGDLSSAE 450
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 129/244 (52%), Gaps = 6/244 (2%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EA+ L +++ G+ + T+ V++ CA VH + + G E D + N+LI
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
+ Y++ ++ ++QVF +MT D+V+W+S++ AYA + +A F M N++P+
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF+S+L AC++ ++++G K+ H++++ G+ + ++ + + G I A ++ +
Sbjct: 159 TFLSILKACNNYSILEKGRKI-HTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
M E + V W+ ++ + +H + A EL L+ +++ FV + N + N+
Sbjct: 218 MT-ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276
Query: 435 ARLI 438
R I
Sbjct: 277 GRRI 280
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/607 (37%), Positives = 354/607 (58%), Gaps = 36/607 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQ---DLFVTNHLINMYAKFGYLDDARHLFD 66
T+ ACA G + +A +I+++ + D+ + +I+MYAK G ++ AR +FD
Sbjct: 264 TVVFACAKLGAMHKA-----RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 318
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLH 121
M ++NV+SW+A+I+ Y HG + LF +L P++ +LAS+L +C +
Sbjct: 319 RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQ 378
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ VHA A + ++ VAN L++ YS A D+A+ +F+ M R+ +SW+ M+ F
Sbjct: 379 VRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAK 438
Query: 181 CKLEAQAIELFAKM---------------KNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
F ++ N E+L LF +++ EG+ PD V+ A
Sbjct: 439 VGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFA 498
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
CA L A + I + F+ D ++ A+I +A+CG + ++++FD+M +++SW
Sbjct: 499 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 558
Query: 286 NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
++++ AY HGQ ++AL LF M + P+ T VSLL ACSHAGLV+EG + F M E
Sbjct: 559 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE 618
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
++ V + HY C+VDLLGR GR+ EA KLI M +E D +W LG+CR H + LAE
Sbjct: 619 DYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAE 678
Query: 403 LAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
AAT L +L+P + ++ +SNIY +G + R M R++K PG +WIE++N+
Sbjct: 679 KAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKS 738
Query: 463 HEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLA 522
H+F+ G HP+ + I++ L+ L +L+ +GYVP+T+ LHD++EE K LY HSEKLA
Sbjct: 739 HQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLA 798
Query: 523 LVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRI 582
+ F ++ E + IRI+KN+R+C DCH F KL S + G+ I+VRD+NRFHHFK+
Sbjct: 799 IAFGLIATP----EHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGA 854
Query: 583 CSCNDYW 589
CSC DYW
Sbjct: 855 CSCGDYW 861
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 190/389 (48%), Gaps = 51/389 (13%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ Q Q+H + +++ V N LI Y+ + LDDA LFD M R+ VSW+ +
Sbjct: 93 NLTQVRQVHAQA--SVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVM 150
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVHALALKFSLDAHV 138
+ G+A+ G+ CF F L++ P+ ++L V+ +C L
Sbjct: 151 VGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN---------------- 194
Query: 139 YVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
+ AL++MY K C ++A +F+ M+ R++++W MI + C
Sbjct: 195 -LQMALVDMYVK-CREIEDARFLFDKMQERDLVTWTVMIGGYAECG-------------K 239
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
E+L LF +++ EG+ PD V+ ACA L A + I + F+ D ++ A
Sbjct: 240 ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTA 299
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
+I YA+CG + ++++FD+M +++SW++++ AY HGQ ++AL LF M + PD
Sbjct: 300 MIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPD 359
Query: 314 SATFVSLLSACSHAGLVQEGNKV-----FHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
T SLL AC + + + +V H ML+N V +L H+ L +
Sbjct: 360 KITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALD------D 413
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
A L M + DSV WSV++G K G+
Sbjct: 414 AYGLFDGMCVR-DSVSWSVMVGGFAKVGD 441
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 169/396 (42%), Gaps = 91/396 (22%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+L +AC N+ Q Q+H + Q+L V N L++ Y+ + LDDA LFD M
Sbjct: 364 ASLLYACINCRNLTQVRQVHAQA--SVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGM 421
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL---------------------------- 100
R+ VSW+ ++ G+A+ G+ CF F L+
Sbjct: 422 CVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMR 481
Query: 101 -QYFFPNEFSLASVLISCDYLHGKLVHALAL-------KFSLDAHVYVANALINMYSK-S 151
+ P++ ++ +V+ +C L G + A + KF LD V + A+I+M++K
Sbjct: 482 EEGVVPDKVAMVTVVFACAKL-GAMHKARTIDDYIQRKKFQLD--VILGTAMIDMHAKCG 538
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
C + A ++F+ ME +NVISW++MIAA + +AL LF + R G
Sbjct: 539 CVESAREIFDRMEEKNVISWSAMIAA-------------YGYHGQGRKALDLFPMMLRSG 585
Query: 212 MAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ P+ T +L AC AGLV E SL+ +ED +V A
Sbjct: 586 ILPNKITLVSLLYACSHAGLVEE--GLRFFSLM----WEDYSVRA--------------- 624
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGL 329
D+ + ++ G+ EAL+L +M V+ D + + L AC
Sbjct: 625 -----------DVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
V K S+LE P HY + ++ GR
Sbjct: 674 VVLAEKAATSLLELQPQNP--GHYILLSNIYANAGR 707
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 117/295 (39%), Gaps = 40/295 (13%)
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+E Q + + N EE F LQR + P + ++V C L R VH+
Sbjct: 52 IETQFRQTSLNLHNREEESSKFHFLQR--LNPKFYISALV--NCRNLTQVRQ---VHAQA 104
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ +G ++ V+AN LI+ Y+ ++ + +FD M D VSW+ ++ +A G
Sbjct: 105 SVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCF 164
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQ--------------EGNKVFHSMLENHG 345
F + +PD+ T ++ AC +Q + +F M E
Sbjct: 165 GTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQER-- 222
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKL---IREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
L + M+ G+ E+ L +RE + PD V ++ +C K G A
Sbjct: 223 ---DLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 279
Query: 403 LAATKL--KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
+ + K+ + LG M ++Y G AR I M+ V +SW
Sbjct: 280 IIDDYIQRKKFQLDVILG-TAMIDMYAKCGCVESAREIFDRMEEKNV-----ISW 328
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/573 (39%), Positives = 342/573 (59%), Gaps = 29/573 (5%)
Query: 33 NNFPNEPQDLFVT---------NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
N P E + LF N L++ Y + G + +AR +FD+MP+RNVVSWTA+I GY
Sbjct: 7 NKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGY 66
Query: 84 AQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVHALALKFSLDAHVYVAN 142
Q G EE LF + P ++ +V++ G++ A L + VA+
Sbjct: 67 VQEGLIEEAELLF-----WRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVAS 121
Query: 143 ALINMYSKSCAD----EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
NM C++ EA ++F+ M RNV++W SMI+ + + I+++ + E
Sbjct: 122 T--NMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFEL 179
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EAL LF +QREG+ P + + VL C L + H VHS + + F+ D +++ LI
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLI 239
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
Y +CG + +K+VFD+ + D+V WNSI+ YA HG ++AL++F +M ++ PD
Sbjct: 240 TMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEI 299
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF+ +LSACS+ G V+EG ++F SM + V P+ +HYACMVDLLGR G++ EA LI
Sbjct: 300 TFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIEN 359
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MP+E D+++W LLG+CR H LAE+AA KL QLEP ++ ++ +SN+Y +
Sbjct: 360 MPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDV 419
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR-HPQREAIFKKLEELIGQLKGMGY 494
+RK M+ +RK PG SWIE++ +VH F+ GG HP+ E I KKL +L L+ GY
Sbjct: 420 VELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGY 479
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
P+ S +HD++EE K L HSEKLA+ + ++ E IR+MKN+R+C D H+
Sbjct: 480 CPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLK----VPEGMPIRVMKNLRVCGDSHS 535
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCND 587
+KL + + G+EI++RD+NRFHHFKD +CSC+D
Sbjct: 536 TIKLIAQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 153/325 (47%), Gaps = 54/325 (16%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G + +A QL + M +D+ + ++I+ G L +AR +FDEMP+RNVV+WT+
Sbjct: 101 GRVDEARQLFDMM------PVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTS 154
Query: 79 LISG-------------YAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL--- 120
+ISG Y + G E LF SL+Q P+ S+ SVL C L
Sbjct: 155 MISGEKDDGTWSTMIKIYERKGFELEALALF-SLMQREGVRPSFPSVISVLSVCGSLASL 213
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
HG+ VH+ ++ D +YV++ LI MY K C D A +VF+ ++++ WNS+IA
Sbjct: 214 DHGRQVHSQLVRSQFDIDIYVSSVLITMYIK-CGDLVTAKRVFDRFSSKDIVMWNSIIAG 272
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHA 235
+A+ E+AL +F + +APD TF VL AC+ G V E
Sbjct: 273 -------------YAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKE-GL 318
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYAL 294
S+ +KY + T ++ R G ++ + + + M D + W ++L A
Sbjct: 319 EIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRT 378
Query: 295 HGQ-------AKEALQLFSNMNVQP 312
H AK+ LQL N N P
Sbjct: 379 HKNLDLAEIAAKKLLQLEPN-NAGP 402
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ C ++ Q+H ++ + D++V++ LI MY K G L A+ +FD
Sbjct: 202 SVLSVCGSLASLDHGRQVHSQLVRS--QFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFS 259
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHAL 128
+++V W ++I+GYAQHG E+ +F + P+E + VL +C Y GK+ L
Sbjct: 260 SKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYT-GKVKEGL 318
Query: 129 AL------KFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAAFRA 180
+ K+ +D ++++ ++ +EA + ENM + I W +++ A R
Sbjct: 319 EIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRT 378
Query: 181 CK 182
K
Sbjct: 379 HK 380
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/680 (35%), Positives = 374/680 (55%), Gaps = 99/680 (14%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+++ Y L C I QA +L HM ++ +P D F+ N L+++YAKFG L DA++
Sbjct: 21 TSEAYTQLVLECVRTNEINQAKRLQSHMEHHLF-QPTDSFLHNQLLHLYAKFGKLRDAQN 79
Query: 64 LFDEMPKRNVVSWTALISGYAQHGN-------------------------------AEEC 92
LFD+M KR++ SW AL+S YA+ G+ +E
Sbjct: 80 LFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 93 FRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINM 147
LF + + F P E+++ S+L + D +GK +H + + +V++ NAL +M
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199
Query: 148 YSKSCAD--EAWKVFENMEFRNVISWN--------------------------------- 172
Y+K C + +A +F+ + +N++SWN
Sbjct: 200 YAK-CGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVT 258
Query: 173 --SMIAAFRACKLEAQAIELFAKMK------------------NEEEALFLFRQLQREGM 212
++IAA+ C +A +F++ K EE+AL LF ++ E +
Sbjct: 259 MSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHI 318
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD T S V+ +CA L + H AVH G ++ ++++ALI Y++CG I ++
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VF+ M ++VSWN+++ A +G K+AL+LF NM +PD+ TF+ +LSAC H
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+++G + F S+ HG+ P LDHYACMV+LLGR GRI +A LI+ M +PD +IWS LL
Sbjct: 439 IEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
C G+ AE+AA L +L+P ++ ++ +SN+Y G + +R MK V+K
Sbjct: 499 SICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKK 558
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
+ G SWIEI+N VH F S + HP+ E I++KL LIG+L+ G+ P T+L LHD+ E+
Sbjct: 559 FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDE 618
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K + + HSEKLAL F ++ + + S IRI+KNIRIC DCH FMK AS ++G++I++
Sbjct: 619 KFKSICFHSEKLALAFGLIKKPNGI---SPIRIIKNIRICNDCHEFMKFASRIIGRQIIL 675
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RDSNRFHHF CSCND W
Sbjct: 676 RDSNRFHHFSTGKCSCNDNW 695
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/592 (38%), Positives = 345/592 (58%), Gaps = 29/592 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y C +++ Q+H M+ L++ L+ MYA+ G L+DA ++ D
Sbjct: 38 YDAAITECVGRRALREGRQVHARMVT--AGYRPALYLATRLVIMYARCGALEDAHNVLDG 95
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHG---- 122
MP+RNVVSWTA+ISGY+Q+ E + LF +L+ PNEF+LASVL SC G
Sbjct: 96 MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQH 155
Query: 123 --KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFR 179
K VHA A+K + + H++V ++L++MY++S EA +VF+ + R+V+S+ ++++ +
Sbjct: 156 QIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGY- 214
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
++ +EEAL LFRQL EGM + TFS++L A +GL + + VH
Sbjct: 215 ------------TRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVH 262
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
LI + + N+LI Y++CG + S++VFD M +VSWN++L Y HG A
Sbjct: 263 GLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAY 322
Query: 300 EALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
E +QLF M V+PDS T +++L SH GLV EG +F +++ + HY C++
Sbjct: 323 EVVQLFRFMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVI 382
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G++ +A LI++MP +P IW LLG+CR H + E A KL +EP ++
Sbjct: 383 DLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAG 442
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SNIY + + +RK M V K PG SW+ ++ +H F S + HP++E
Sbjct: 443 NYVILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKED 502
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I K+ E+ +K G+VP+ S LHD+++E KE L HSEKLA+ F +M+ S
Sbjct: 503 INVKINEIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPS----D 558
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I++MKN+RICVDCHNF K S + G+EI +RD NRFH + C+C DYW
Sbjct: 559 LTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/626 (38%), Positives = 352/626 (56%), Gaps = 60/626 (9%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S ++Y+TL AC H ++ ++H H N + ++N LI+MYAK G L DA+
Sbjct: 62 SPRLYSTLIAACLRHRKLELGKRVHAH--TKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--------------------------- 96
LFDE+P++++ SW +ISGYA G E+ +LF
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEA 179
Query: 97 CSLLQYFFPNEFSLASVLISCDYL----------HGKLVHALALKFSLDAHVYVANALIN 146
L + NE S ++ L GK +H ++ L+ V AL++
Sbjct: 180 LDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLD 239
Query: 147 MYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
+Y K + +EA +F+ M ++++SW +MI C + + E F+ LFR
Sbjct: 240 LYGKCGSLNEARGIFDQMADKDIVSWTTMI---HRCFEDGRKKEGFS----------LFR 286
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
L G+ P+ TF+ VL ACA L E+ VH + + G++ + A+AL+H Y++CG
Sbjct: 287 DLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCG 346
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+ +++VF++M DLVSW S++ YA +GQ ALQ F ++ +PD TFV +LS
Sbjct: 347 NTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLS 406
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC+HAGLV G + FHS+ E HG+V DHYAC++DLL R GR EAE +I MPM+PD
Sbjct: 407 ACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDK 466
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+W+ LLG CR HG LAE AA L +LEP + ++ +SNIY +G + + +R +M
Sbjct: 467 FLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDM 526
Query: 443 KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL 502
+ K PG SWIEI+ +VH F G HP+ I + L EL ++K GYV +T+ L
Sbjct: 527 DNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVL 586
Query: 503 HDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDL 562
HD+EEE KE+ +++HSEKLA+ F I++ + I++ KN+R CVDCHN MK S +
Sbjct: 587 HDVEEEQKEQNIFYHSEKLAVAFGIISTSP----GTPIKVFKNLRTCVDCHNAMKYISKI 642
Query: 563 LGKEIVVRDSNRFHHFKDRICSCNDY 588
+ ++I+VRDSNRFH F D CSC DY
Sbjct: 643 VQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 175/380 (46%), Gaps = 42/380 (11%)
Query: 80 ISGYAQHGNAEECFRLFC---------SLLQYFFPNEFSLASVLISCDYLH-----GKLV 125
+S +++H EE LFC L L S LI+ H GK V
Sbjct: 26 LSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRV 85
Query: 126 HALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKL 183
HA + + ++N LI+MY+K C +A +F+ + +++ SWN+MI+ +
Sbjct: 86 HAHTKASNFIPGIVISNRLIHMYAK-CGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGR 144
Query: 184 EAQAIELFAKMKNEE------------------EALFLFRQLQR-EGMAPDWCTFSIVLK 224
QA +LF +M + + EAL LFR +Q E + T S L
Sbjct: 145 IEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALA 204
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
A A + + R +H + + G E D V+ AL+ Y +CGS++ ++ +FD+M D+VS
Sbjct: 205 AAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVS 264
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W +++ G+ KE LF ++ V+P+ TF +L+AC+ Q G +V H +
Sbjct: 265 WTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEV-HGYM 323
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G P + +V + + G A ++ +MP PD V W+ L+ ++G+ +A
Sbjct: 324 TRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMA 382
Query: 402 -ELAATKLKQLEPGDSLGFV 420
+ + L+ D + FV
Sbjct: 383 LQFFESLLRSGTKPDEITFV 402
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/591 (37%), Positives = 347/591 (58%), Gaps = 29/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ CA G++ + +H +I + N L+ N L+N+YAK G + A +F E
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLW--NSLVNVYAKCGSANYACKVFGE 251
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
+P+R+VVSWTALI+G+ G R+F +L + F PN ++ S+L SC L G
Sbjct: 252 IPERDVVSWTALITGFVAEGYGSG-LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K VHA +K SLD + +V AL++MY+K+ ++A +F + R++ +W ++A +
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY--- 367
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ E+A+ F Q+QREG+ P+ T + L C+ + T +HS+
Sbjct: 368 ----------AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSM 417
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G D +A+AL+ YA+CG + ++ VFD + D VSWN+I+ Y+ HGQ +A
Sbjct: 418 AIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+ F M PD TF+ +LSACSH GL++EG K F+S+ + +G+ P ++HYACMVD
Sbjct: 478 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVD 537
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+LGR G+ E E I EM + + +IW +LG+C+ HG E AA KL +LEP
Sbjct: 538 ILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSN 597
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ +SN++ G ++ +R M V+K PG SW+E+ +VH F S HP+ I
Sbjct: 598 YILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREI 657
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
KL++L +L +GY P T LH++ + K+E L++HSE+LAL FA+++ + R
Sbjct: 658 HLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTST----RK 713
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+RIC DCH+FMK S++ +E+VVRD N FHHFK+ CSC ++W
Sbjct: 714 TIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 174/369 (47%), Gaps = 37/369 (10%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-------CSLL 100
L+N+Y K L AR + +EMP ++V W +S +E +LF L
Sbjct: 30 LVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLN 89
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKV 159
Q+ F + S A+ L D +G+ +HA K+ ++ + ++NA + MY K+ + W+
Sbjct: 90 QFIFASLISAAASL--GDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQF 147
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ M N+ S N++++ F C E ++ + QL EG P+ TF
Sbjct: 148 FKAMMIENLASRNNLLSGF--CDTETC-----------DQGPRILIQLLVEGFEPNMYTF 194
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+LK CA A+H + K G D+ + N+L++ YA+CGS + + +VF ++
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D+VSW +++ + G L++F+ M P+ TF+S+L +CS V G +V
Sbjct: 255 RDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313
Query: 337 FHSMLENHGVVPQLDHY----ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+++N LD +VD+ + R LE + I ++ D W+V++
Sbjct: 314 HAQIVKN-----SLDGNDFVGTALVDMYAK-NRFLEDAETIFNRLIKRDLFAWTVIVAGY 367
Query: 393 RKHGETRLA 401
+ G+ A
Sbjct: 368 AQDGQGEKA 376
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G D+ + ++L++ Y +C S+ ++QV ++M D+ WN L + +EA
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAG 328
+QLF M ++ + F SL+SA + G
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLG 104
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/579 (38%), Positives = 341/579 (58%), Gaps = 28/579 (4%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ Q Q+H + N ++L V N L+ MY + G L+DA+ LFD M KR+ SW+ +
Sbjct: 65 NLFQVRQVHAQIATN--GAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVI 122
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSL 134
+ GYA+ GN CF +F LL+ P +++S V+ +C D G+L+H + LK L
Sbjct: 123 VGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGL 182
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
D +V L++MY++ ++A ++F M R++ +W MI A + +++ F +
Sbjct: 183 DYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDR 242
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
M+N+ G+ PD V+ ACA L A A+H+ I G+ D ++
Sbjct: 243 MRNQ-------------GIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVIL 289
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
A+I YA+CGS+ ++ +FD+M ++++W++++ AY HGQ ++AL+LF M +
Sbjct: 290 GTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGI 349
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
P+ TFVSLL ACSHAGL++EG + F SM + +GV P + HY CMVDLLGR GR+ EA
Sbjct: 350 LPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEAL 409
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
++I MP+E D V+W LLG+CR H LAE A L +L+ +V +SNIY +G
Sbjct: 410 EMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAG 469
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ R M +RK PG +WIE+ ++++F G K HP+ I+K L+ L +L+
Sbjct: 470 KWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLE 529
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GY P+T+ L+D++EE K+ LY HSEKLA+ F ++ + + IRI KN+R+C
Sbjct: 530 VAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLL----VLPQGHPIRITKNLRVCG 585
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH F K S + K I+VRD+ RFHHFK+ +CSC DYW
Sbjct: 586 DCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/601 (37%), Positives = 342/601 (56%), Gaps = 34/601 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S Q Y L C ++ A+++H H+++N QD F+ LI MY+ G +D AR
Sbjct: 76 SQQTYELLILCCGHRSSLSDALRVHRHILDN--GSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISC----- 117
+FD+ KR + W AL G+ EE L+ + + ++ F+ VL +C
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 118 ---DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
+ GK +HA + +HVY+ L++MY++ C D A VF M RNV+SW++
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM--APDWCTFSIVLKACAGLVT 231
MIA + AK EAL FR++ RE +P+ T VL+ACA L
Sbjct: 254 MIACY-------------AKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+H I + G + + +AL+ Y RCG + + ++VFD+M D+VSWNS++ +
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
Y +HG K+A+Q+F M P TFVS+L ACSH GLV+EG ++F +M +HG+ P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
Q++HYACMVDLLGR R+ EA K++++M EP +W LLGSCR HG LAE A+ +L
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
LEP ++ +V +++IY + +++ + ++K ++ ++K PG W+E+ +++ F S
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSV 540
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+ +P E I L +L +K GY+P+T L+++E E KE + HSEKLAL F ++
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLI 600
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
N + IRI KN+R+C DCH F K S + KEI+VRD NRFH FK+ +CSC DY
Sbjct: 601 NTS----KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDY 656
Query: 589 W 589
W
Sbjct: 657 W 657
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 8/200 (4%)
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
R L +E +P T+ +++ C + A VH I G + D +A LI Y+
Sbjct: 66 IRVLSQES-SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSD 124
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSL 320
GS+ +++VFDK + WN++ +A L G +E L L+ MN V+ D T+ +
Sbjct: 125 LGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 321 LSACSHAGLVQE---GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
L AC + K H+ L G + +VD+ R G + A + MP
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 378 MEPDSVIWSVLLGSCRKHGE 397
+ + V WS ++ K+G+
Sbjct: 245 VR-NVVSWSAMIACYAKNGK 263
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/597 (38%), Positives = 348/597 (58%), Gaps = 41/597 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ +AC + G+I Q ++ + + D V N LINMY+K G L+ AR +FD
Sbjct: 166 FSSALYACTVVGDISQGREIEARTVAS--GYASDSIVQNALINMYSKCGSLESARKVFDR 223
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-----FSLASVLISC----D 118
+ R+V++W +ISGYA+ G A + LF Q PN+ + +L +C D
Sbjct: 224 LKNRDVIAWNTMISGYAKQGAATQALELF----QRMGPNDPKPNVVTFIGLLTACTNLED 279
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIA 176
G+ +H + ++ + + N L+NMY+K S +EA +VFE M R+VI+WN +I
Sbjct: 280 LEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIV 339
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A+ + ++AL +F+Q+Q E +AP+ T S VL ACA L +R
Sbjct: 340 AY-------------VQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGK 386
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
AVH+LIA + D V+ N+L++ Y RCGS+ + VF + LVSW++++ AYA HG
Sbjct: 387 AVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
++ L+ F + + D T VS LSACSH G+++EG + F SM+ +HG+ P H+
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHF 506
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
CMVDLL R GR+ AE LI +MP PD+V W+ LL C+ H +T+ A A KL +LE
Sbjct: 507 LCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELES 566
Query: 414 GDSLGFVQ-MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
D V +SN+Y +G ++ +RK RK PG S+IEI + VHEF +G K H
Sbjct: 567 EDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSH 623
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+ E I +++ L Q+K GYVP+ + LH+++EE KE+ L +HSEKLA+ + +++
Sbjct: 624 PEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPP 683
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + I+KN+R CVDCH K S ++G++IVVRDS RFHHF++ CSC DYW
Sbjct: 684 ----GTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 213/409 (52%), Gaps = 35/409 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ C+ ++KQ LH ++ E D+ + LI MYA+ L+ AR FD
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETRLLE-FDIILGTALITMYARCRDLELARKTFD 118
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL----QYFFPNEFSLASVLISC----D 118
EM K+ +V+W ALI+GY+++G+ +++ ++ + P+ + +S L +C D
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD 178
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAA 177
G+ + A + + V NALINMYSK + + A KVF+ ++ R+VI+WN+MI+
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ QA+ELF +M + P+ TF +L AC L A
Sbjct: 239 YAKQGAATQALELFQRMGPNDP-------------KPNVVTFIGLLTACTNLEDLEQGRA 285
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H + + G+E D VI N L++ Y +C S+ ++QVF++M D+++WN ++ AY +G
Sbjct: 286 IHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYG 345
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
QAK+AL +F M NV P+ T ++LSAC+ G ++G K H+++ + +
Sbjct: 346 QAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG-KAVHALIASGRCKADVVLE 404
Query: 354 ACMVDLLGRVGRILEAEKL---IREMPMEPDSVIWSVLLGSCRKHGETR 399
++++ R G + + + IR+ + V WS L+ + +HG +R
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSL----VSWSTLIAAYAQHGHSR 449
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 192/373 (51%), Gaps = 24/373 (6%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFS 109
MY K G + DA +F + N VSWT +++ +A++G+ E + + L+ P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 110 LASVLISC----DYLHGKLVHALALKFSL-DAHVYVANALINMYSKSCADE--AWKVFEN 162
+ C D G+L+HA+ L+ L + + + ALI MY++ C D A K F+
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYAR-CRDLELARKTFDE 119
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
M + +++WN++IA + A++++ M ++ EGM PD TFS
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSP----------EGMKPDAITFSSA 169
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L AC + + + G+ D+++ NALI+ Y++CGS+ +++VFD++ D+
Sbjct: 170 LYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
++WN+++ YA G A +AL+LF M + +P+ TF+ LL+AC++ +++G + H
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG-RAIHR 288
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
+ G L ++++ + LE + + E D + W++L+ + ++G+ +
Sbjct: 289 KVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAK 348
Query: 400 LAELAATKLKQLE 412
A L K QLE
Sbjct: 349 DA-LDIFKQMQLE 360
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/561 (40%), Positives = 337/561 (60%), Gaps = 29/561 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNA--EECFRLFCS 98
DL V L++MYAK G + +AR +FD M + NV+SWTAL++GY + G E R+F +
Sbjct: 296 DLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSN 355
Query: 99 LLQY--FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+L PN F+ + VL +C D+ G+ VH +K L A V N L+++Y+KS
Sbjct: 356 MLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSG 415
Query: 153 ADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
E A K F+ + +N++S E + K N L R+++ G
Sbjct: 416 RMESARKCFDVLFEKNLVS-------------ETVVDDTNVKDFNLNSEQDLDREVEYVG 462
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
T++ +L A + T +H+++ K GF D + NALI Y++CG+ +
Sbjct: 463 SGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAAL 522
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
QVF+ M ++++W SI+ +A HG A +AL+LF NM V+P+ T++++LSACSH G
Sbjct: 523 QVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVG 582
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
L+ E K F SM +NHG+VP+++HYACMVDLLGR G + EA + I MP + D+++W
Sbjct: 583 LIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTF 642
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
LGSCR H T+L E AA + + EP D ++ +SN+Y G + IRK MK ++
Sbjct: 643 LGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQIT 702
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K G SWIE+EN+VH+F G HP+ + I++KL+EL ++K +GYVP T LHD+E+E
Sbjct: 703 KEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDE 762
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE+ L+ HSEKLA+ FA+++ + IR+ KN+R+C DCH +K S + G+EIV
Sbjct: 763 QKEQYLFQHSEKLAVAFALISTPN----PKPIRVFKNLRVCGDCHTAIKYISMVSGREIV 818
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+NRFHH KD CSCNDYW
Sbjct: 819 VRDANRFHHMKDGTCSCNDYW 839
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 160/334 (47%), Gaps = 33/334 (9%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM-- 68
L C N LH + + N P D + N LI +Y+K A +F M
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTS--NLPLDTLLLNSLITLYSKSNDPITAFSIFQSMEN 115
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYLHG 122
KR+VVS++++IS +A + N + +F LL +PNE+ +V+ +C + G
Sbjct: 116 SKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTG 175
Query: 123 KLVHALALKFS-LDAHVYVANALINMYSKSCA----DEAWKVFENMEFRNVISWNSMIAA 177
+ LK D+HV V LI+M+ K C+ + A KVF+ M +NV++W MI
Sbjct: 176 LCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITR 235
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+AI+LF +M L G PD T + ++ CA +
Sbjct: 236 LAQYGYNDEAIDLFLEM------------LVSSGYVPDRFTLTGLISVCAEIQFLSLGKE 283
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+HS + + G D + +L+ YA+CG + +++VFD M H+++SW +++ Y G
Sbjct: 284 LHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGG 343
Query: 298 A--KEALQLFSNM----NVQPDSATFVSLLSACS 325
+EA+++FSNM V P+ TF +L AC+
Sbjct: 344 GYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACA 377
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 25/286 (8%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEF--RNVISWNSMIAAF 178
GKL+H +L + N+LI +YSKS A+ +F++ME R+V+S++S+I+ F
Sbjct: 71 GKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCF 130
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ +A+E+F ++ L ++G+ P+ F+ V++AC + +
Sbjct: 131 ANNRNCLKAVEMFDQL------------LLQDGVYPNEYCFTAVIRACLKGGFFKTGLCL 178
Query: 239 HSLIAKYGFEDDTV-IANALIHAYARCGSIS---LSKQVFDKMTYHDLVSWNSILKAYAL 294
+ K G+ D V + LI + + S++ +++VFDKM ++V+W ++ A
Sbjct: 179 FGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQ 238
Query: 295 HGQAKEALQLFSNMNVQ----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G EA+ LF M V PD T L+S C+ + G K HS + G+V L
Sbjct: 239 YGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLG-KELHSWVIRSGLVLDL 297
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+VD+ + G + EA K+ M E + + W+ L+ + G
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGM-REHNVMSWTALVNGYVRGG 342
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T S++LK C +H + DT++ N+LI Y++ + +F M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 278 --TYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQ 331
+ D+VS++SI+ +A + +A+++F + V P+ F +++ AC G +
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 332 EGNKVFHSMLENHGVVPQLDHYAC----MVDLLGRVGRI--LEAEKLIREMPMEPDSVIW 385
G +F +L+ D + C ++D+ + + LE+ + + + E + V W
Sbjct: 174 TGLCLFGFVLK----TGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTW 229
Query: 386 SVLLGSCRKHG 396
++++ ++G
Sbjct: 230 TLMITRLAQYG 240
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/595 (37%), Positives = 353/595 (59%), Gaps = 34/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y L +AC +++ ++H HMI P ++ L+ Y K L+DAR +
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPAT----YLRTRLLIFYGKCDCLEDARKVL 109
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYL 120
DEMP++NVVSWTA+IS Y+Q G++ E +F +++ PNEF+ A+VL SC
Sbjct: 110 DEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLA 169
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
GK +H L +K++ D+H++V ++L++MY+K+ +EA ++FE + R+V+S ++IA +
Sbjct: 170 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGY- 228
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A++ +EEAL +F++LQ EGM P++ T++ +L A +GL H H
Sbjct: 229 ------------AQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAH 276
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + V+ N+LI Y++CG++S ++++FD M +SWN++L Y+ HG +
Sbjct: 277 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGR 336
Query: 300 EALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN-HGVVPQLDHYA 354
E L+LF M V+PD+ T +++LS CSH + G ++ M+ +G+ P +HY
Sbjct: 337 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYG 396
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VD+LGR GRI EA + I+ MP +P + + LLG+CR H + E +L ++EP
Sbjct: 397 CIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPE 456
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
++ +V +SN+Y +G + +R M V K PG SWI+ E +H F + + HP+
Sbjct: 457 NAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPR 516
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
RE + K++E+ ++K GYVP+ S L+D++EE KE+ L HSEKLAL F ++ G
Sbjct: 517 REEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTG--- 573
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E IR+ KN+RICVDCHNF K+ S + +E+ +RD NRFH ICSC DYW
Sbjct: 574 -EGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 352/588 (59%), Gaps = 27/588 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L C + + + + H+ N + P +F+ N LINMY KF L+DA LFD+
Sbjct: 64 YSELIKCCISNRAVHEGNLICRHLYFN-GHRPM-MFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG-KLV 125
MP+RNV+SWT +IS Y++ ++ L +L+ PN ++ +SVL SC+ + +++
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H +K L++ V+V +ALI++++K ++A VF+ M + I WNS+I F
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF------ 235
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
A+ + AL LF++++R G + T + VL+AC GL H I K
Sbjct: 236 -------AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
Y + D ++ NAL+ Y +CGS+ + +VF++M D+++W++++ A +G ++EAL+L
Sbjct: 289 Y--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M +P+ T V +L ACSHAGL+++G F SM + +G+ P +HY CM+DLLG
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
+ G++ +A KL+ EM EPD+V W LLG+CR LAE AA K+ L+P D+ +
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY S ++ IR M+ ++K PG SWIE+ ++H F G HPQ + KK
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKK 526
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L +LI +L G+GYVPET+ L D+E E E+ L HHSEKLAL F +M +L E+ VIR
Sbjct: 527 LNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM---TLPIEK-VIR 582
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I KN+RIC DCH F KLAS L + IV+RD R+HHF+D CSC DYW
Sbjct: 583 IRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 36/224 (16%)
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH--SLIAKY----GFE 248
++ A+ LQ G+ D T+S ++K C ++ R AVH +LI ++ G
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCC---ISNR---AVHEGNLICRHLYFNGHR 93
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA---LHGQAKEALQLF 305
+ N LI+ Y + ++ + Q+FD+M +++SW +++ AY+ +H +A E L L
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 306 SNMNVQPDSATFVSLLSACS--------HAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
NV+P+ T+ S+L +C+ H G+++EG LE+ V + ++
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG-------LESDVFV-----RSALI 201
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D+ ++G +A + EM + D+++W+ ++G ++ + +A
Sbjct: 202 DVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 343/556 (61%), Gaps = 28/556 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ V ++I Y + G LD+AR LFDEM RNV +WT ++SGYA++G + +LF +
Sbjct: 174 KDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM 233
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMYSKSCA-DEAW 157
+ NE S ++L+ G++ A L ++ VA N +I + + A
Sbjct: 234 PER---NEVSWTAMLMGYTQ-SGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRAR 289
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+FE M+ R+ +WN+MI F L+ +A+ LFA+M QREG+A ++
Sbjct: 290 MMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARM-------------QREGVALNFP 336
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+ VL CA L + H VH+ + + F+ D +A+ LI Y +CG + +K +F++
Sbjct: 337 SMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRF 396
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ D+V WNS++ Y+ HG +EAL +F +M VQPD TF+ +LSACS++G V+EG
Sbjct: 397 LFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGF 456
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F +M + V P ++HYACMVDLLGR GR+ EA +L+ +MPMEPD+++W LLG+CR
Sbjct: 457 EIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRN 516
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H + LAE+A KL +LEP ++ +V +S++Y G + ++RK++ RV K+PG S
Sbjct: 517 HMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKIN-RRVIKFPGCS 575
Query: 455 WIEIENRVHEFASG-GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
WIE+E +VH F G K HP++ I + LE+L G L+ GY P+ S LHD++EE K
Sbjct: 576 WIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHS 635
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L +HSE+LA+ + ++ E IR+MKN+R+C DCH+ +KL + + G+EI++RD+N
Sbjct: 636 LGYHSERLAVAYGLLK----VPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDAN 691
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFKD CSC D+W
Sbjct: 692 RFHHFKDGSCSCKDFW 707
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 165/369 (44%), Gaps = 35/369 (9%)
Query: 35 FPNEPQDLFVT-NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F PQ V+ N +I+ Y K G + DAR +FD MP+RNVVSWT+++ GY Q G EE
Sbjct: 75 FDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAE 134
Query: 94 RLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSL--DAHVYVANALINMYSK- 150
+LF + P ++ ++ L + F + + V V +I Y +
Sbjct: 135 KLFWEM-----PRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQV 189
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
DEA ++F+ M+ RNV +W +M++ + A +LF M E
Sbjct: 190 GRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEV---------- 239
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
W T ++ +G + E ++ K+ V N +I + G + +
Sbjct: 240 ----SW-TAMLMGYTQSGRMKEAF-ELFEAMPVKW-----IVACNEMILQFGLAGEMHRA 288
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATF---VSLLSACSHA 327
+ +F+ M D +WN+++K + G EAL LF+ M + + F +S+LS C+
Sbjct: 289 RMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASL 348
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
+ G +V H+ L L + ++ + + G ++ A+ + + D V+W+
Sbjct: 349 ASLDHGRQV-HARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFK-DVVMWNS 406
Query: 388 LLGSCRKHG 396
++ +HG
Sbjct: 407 MITGYSQHG 415
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 66/283 (23%)
Query: 156 AWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A KVF+N R + SWN+M++A+ F K +AL LF Q+ +
Sbjct: 38 ARKVFDNTPLPQRTIASWNAMVSAY------------FESHK-PRDALLLFDQMPQR--- 81
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+TV N +I Y + G ++ +++V
Sbjct: 82 ------------------------------------NTVSFNGMISGYVKNGMVADARKV 105
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEG 333
FD M ++VSW S+++ Y G +EA +LF M + + ++ ++ + +
Sbjct: 106 FDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMP-RRNVVSWTVMIGGLLKESRIDDA 164
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K+F + E VV M+ +VGR+ EA +L EM + + W+ ++
Sbjct: 165 KKLFDMIPEKDVVV-----VTNMIGGYCQVGRLDEARELFDEMKVR-NVFTWTTMVSGYA 218
Query: 394 KHGETRLAELAATKLKQLEP-GDSLGFVQMSNIYCLSGSFNKA 435
K+G +A KL ++ P + + + M Y SG +A
Sbjct: 219 KNGRVDVAR----KLFEVMPERNEVSWTAMLMGYTQSGRMKEA 257
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/592 (40%), Positives = 349/592 (58%), Gaps = 32/592 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHLFDE 67
+ ACA + QLH I + D V LINMYAK G + AR +FD+
Sbjct: 277 VISACANMELLLLGQQLHSQAIRH--GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ 334
Query: 68 MPKRNVVSWTALISGYAQHGN-AEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH---- 121
+ NV SWTA+I+GY Q G EE LF + L + PN F+ +S L +C L
Sbjct: 335 ILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRI 394
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ V A+K + VAN+LI+MY++S D+A K F+ + +N+IS+N++I A+
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAY-- 452
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
AK N EEAL LF +++ +GM TF+ +L A + T +H+
Sbjct: 453 -----------AKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G + + + NALI Y+RCG+I + QVF+ M +++SW SI+ +A HG A +
Sbjct: 502 RVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQ 561
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M V+P+ T++++LSACSH GLV EG K F SM HGV+P+++HYAC+V
Sbjct: 562 ALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIV 621
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR G + EA + I MP + D+++W LG+CR HG L + AA + + EP D
Sbjct: 622 DILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPA 681
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
++ +SN+Y +++ IRK MK + K G SW+E+EN+VH+F G HP+
Sbjct: 682 AYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAE 741
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+ +L+ L ++K +GYVP LHD+EEE KE+ L+ HSEK+A+ F +++ +
Sbjct: 742 IYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKM---- 797
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+RIC DCH+ +K S G+EI+VRD+NRFHH KD CSCN+YW
Sbjct: 798 KPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 177/386 (45%), Gaps = 40/386 (10%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y+ C + +HE + + + D N LI++Y+K G + A +F
Sbjct: 67 QTYSLFLKKCIRTRSFDIGTLVHEKLTQS--DLQLDSVTLNSLISLYSKCGQWEKATSIF 124
Query: 66 DEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH-- 121
M R+++SW+A++S +A + F +++ ++PNE+ A+ +C
Sbjct: 125 RLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFV 184
Query: 122 --GKLVHALALKFS-LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIA 176
G + +K L + V V LI+M+ K D A+KVFE M RN ++W MI
Sbjct: 185 SVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMIT 244
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+AI+LF M +F G PD T S V+ ACA +
Sbjct: 245 RLMQFGYAGEAIDLFLDM--------IF-----SGYEPDRFTLSGVISACANMELLLLGQ 291
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARC---GSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+HS ++G D + LI+ YA+C GS+ ++++FD++ H++ SW +++ Y
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351
Query: 294 LHGQ-AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
G +EAL LF M +V P+ TF S L AC++ ++ G +VF H V
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLG 406
Query: 350 LDHYAC----MVDLLGRVGRILEAEK 371
C ++ + R GRI +A K
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARK 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+A+ + +G PD T+S+ LK C + + VH + + + D+V N+LI
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 259 HAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
Y++CG + +F M + DL+SW++++ +A + AL F +M P+
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL--GRVGRILEAEKL 372
F + ACS A V G+ +F +++ + + ++D+ GR G ++ A K+
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGR-GDLVSAFKV 227
Query: 373 IREMPMEPDSVIWSVLLGSCRKHG 396
+MP E ++V W++++ + G
Sbjct: 228 FEKMP-ERNAVTWTLMITRLMQFG 250
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/555 (40%), Positives = 332/555 (59%), Gaps = 26/555 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY- 102
V L++MYAK G + DAR F+ +P +V+ + +IS YAQ E+ F LF L++
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359
Query: 103 FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
PNE+SL+SVL +C + GK +H A+K ++ ++V NAL++ Y+K + D +
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 419
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K+F ++ N +SWN+++ F L EEAL +F ++Q M
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLG-------------EEALSVFCEMQAAQMPCTQV 466
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+S VL+ACA + RHA +H I K F +DTVI N+LI YA+CG I + +VF +
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL 526
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
D++SWN+I+ YALHGQA +AL+LF MN V+ + TFV+LLS CS GLV G
Sbjct: 527 MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGL 586
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+F SM +HG+ P ++HY C+V LLGR GR+ +A + I ++P P +++W LL SC
Sbjct: 587 SLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCII 646
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H L +A K+ ++EP D +V +SN+Y +GS ++ L+RK M+ VRK PGLS
Sbjct: 647 HKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 706
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W+EI+ +H F+ G HP I LE L + GY+P+ ++ LHD+++E K L
Sbjct: 707 WVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRML 766
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
+ HSE+LAL + ++ + IRI+KN+R C+DCH + S ++ +EI+VRD NR
Sbjct: 767 WVHSERLALAYGLV----MTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINR 822
Query: 575 FHHFKDRICSCNDYW 589
FHHF+D CSC DYW
Sbjct: 823 FHHFEDGKCSCGDYW 837
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 31/349 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A C G+ + +H H++ DLF N L+NMY K G L AR LFD M
Sbjct: 63 ARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRM 122
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLISCDYLH 121
P+RN+VS+ L+ +AQ G+ E LF L Q+ LA + +
Sbjct: 123 PERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAG 182
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G VH+ A K D + +V + LI+ YS S +A VF + ++ + W +M++ +
Sbjct: 183 G--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSE 240
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A +F+KM+ G P+ + VLKA L + +H
Sbjct: 241 NDCPENAFRVFSKMR-------------VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHG 287
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K + + + AL+ YA+CG I ++ F+ + Y D++ + ++ YA Q ++
Sbjct: 288 CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQ 347
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
A +LF + +V P+ + S+L AC++ +VQ F + NH +
Sbjct: 348 AFELFLRLMRSSVLPNEYSLSSVLQACTN--MVQLD---FGKQIHNHAI 391
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 34/357 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC + Q+H H I DLFV N L++ YAK +D + +F +
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIK--IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGK 123
N VSW ++ G++Q G EE +FC + P + + +SVL +C H
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H K + + + N+LI+ Y+K C +A KVF+++ R++ISWN++I+ +
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAK-CGYIRDALKVFQHLMERDIISWNAIISGY--- 541
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA-SAVHS 240
L QA +AL LF ++ + + + TF +L C+ H S S
Sbjct: 542 ALHGQA----------ADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDS 591
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQ-VFDKMTYHDLVSWNSILKAYALHGQAK 299
+ +G + ++ R G ++ + Q + D + + W ++L + +H
Sbjct: 592 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV- 650
Query: 300 EALQLFSN---MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV--VPQL 350
AL FS + ++P D T+V L + + AG + + + SM N GV VP L
Sbjct: 651 -ALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSM-RNIGVRKVPGL 705
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 5 TQI-YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
TQ+ Y+++ ACA +I+ A Q+H + + N D + N LI+ YAK GY+ DA
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN--NDTVIGNSLIDTYAKCGYIRDALK 521
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHG 122
+F + +R+++SW A+ISGYA HG A + LF + + N+ + ++L C G
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST-G 580
Query: 123 KLVHALAL 130
+ H L+L
Sbjct: 581 LVNHGLSL 588
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/594 (39%), Positives = 351/594 (59%), Gaps = 37/594 (6%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
+C+ ++ Q H+ + F EP DLFV++ L++MY+K G L DAR LFDE+ RN+
Sbjct: 161 SCSALLDLHSGRQAHQQALI-FGFEP-DLFVSSALVDMYSKCGELRDARTLFDEISHRNI 218
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE---------FSLASVLISCDYLHGKL 124
VSWT++I+GY Q+ +A LF L +E ++ SVL +C + K
Sbjct: 219 VSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKS 278
Query: 125 ----VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
VH +K + + V N L++ Y+K C + + +VF+ M R+VISWNS+IA +
Sbjct: 279 ITEGVHGFLIKRGFEGDLGVENTLMDAYAK-CGELGVSRRVFDGMAERDVISWNSIIAVY 337
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ +++E+F +M + E + + T S VL ACA ++R +
Sbjct: 338 AQNGMSTESMEIFHRMVKDGEINY------------NAVTLSAVLLACAHSGSQRLGKCI 385
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + K G E + + ++I Y +CG + ++++ FD+M ++ SW++++ Y +HG A
Sbjct: 386 HDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHA 445
Query: 299 KEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
KEAL++F MN V+P+ TFVS+L+ACSHAGL++EG F +M V P ++HY C
Sbjct: 446 KEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC 505
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDLLGR G + EA LI+ M + PD V+W LLG+CR H L E++A KL +L+P +
Sbjct: 506 MVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKN 565
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+V +SNIY +G + +R MK S + K PG S ++I+ RVH F G + HPQ
Sbjct: 566 CGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQH 625
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
E I++ LE+L +L+ +GYVP+ + LHD+ E KE L HSEKLA+ F IMN
Sbjct: 626 EKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNT----V 681
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I I+KN+R+C DCH +K S ++ +EIVVRDS RFHHF+D +CSC DYW
Sbjct: 682 PGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 30/243 (12%)
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
NV SWNS+IA A+ + EAL F +++ + P+ TF +K+C
Sbjct: 116 NVFSWNSVIAEL-------------ARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 162
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
+ L+ H +GFE D +++AL+ Y++CG + ++ +FD++++ ++VSW
Sbjct: 163 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 222
Query: 287 SILKAYALHGQAKEALQLFSNMNVQP-----------DSATFVSLLSACSHAG--LVQEG 333
S++ Y + A AL LF V+ D VS+LSACS + EG
Sbjct: 223 SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
H L G L ++D + G + + ++ M E D + W+ ++
Sbjct: 283 ---VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMA-ERDVISWNSIIAVYA 338
Query: 394 KHG 396
++G
Sbjct: 339 QNG 341
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/680 (35%), Positives = 373/680 (54%), Gaps = 99/680 (14%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+++ Y L C I QA +L HM ++ +P D F+ N L+++YAKFG L DA++
Sbjct: 21 TSEAYTQLVLECVRTNEINQAKRLQSHMEHHLF-QPTDSFLHNQLLHLYAKFGKLRDAQN 79
Query: 64 LFDEMPKRNVVSWTALISGYAQHGN-------------------------------AEEC 92
LFD+M KR+ SW AL+S YA+ G+ +E
Sbjct: 80 LFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 93 FRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINM 147
LF + + F P E+++ S+L + D +GK +H + + +V++ NAL +M
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199
Query: 148 YSKSCAD--EAWKVFENMEFRNVISWN--------------------------------- 172
Y+K C + +A +F+ + +N++SWN
Sbjct: 200 YAK-CGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVT 258
Query: 173 --SMIAAFRACKLEAQAIELFAKMK------------------NEEEALFLFRQLQREGM 212
++IAA+ C +A +F++ K EE+AL LF ++ E +
Sbjct: 259 MSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHI 318
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD T S V+ +CA L + H AVH G ++ ++++ALI Y++CG I ++
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VF+ M ++VSWN+++ A +G K+AL+LF NM +PD+ TF+ +LSAC H
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+++G + F S+ HG+ P LDHYACMV+LLGR GRI +A LI+ M +PD +IWS LL
Sbjct: 439 IEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
C G+ AE+AA L +L+P ++ ++ +SN+Y G + +R MK V+K
Sbjct: 499 SICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKK 558
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
+ G SWIEI+N VH F S + HP+ E I++KL LIG+L+ G+ P T+L LHD+ E+
Sbjct: 559 FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDE 618
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K + + HSEKLAL F ++ + + S IRI+KNIRIC DCH FMK AS ++G++I++
Sbjct: 619 KFKSICFHSEKLALAFGLIKKPNGI---SPIRIIKNIRICNDCHEFMKFASRIIGRQIIL 675
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RDSNRFHHF CSCND W
Sbjct: 676 RDSNRFHHFSTGKCSCNDNW 695
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/560 (40%), Positives = 338/560 (60%), Gaps = 28/560 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++LFV LI++Y K G +DDA +F+EMPK +V+ W+ +I+ YAQ +EE +FC +
Sbjct: 279 EELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRM 338
Query: 100 LQ-YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
+ PN+F+LAS+L +C D G +H +K LD +V+V+NAL++MY+K C
Sbjct: 339 RRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAK-CGR 397
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+ + ++F +SWN++I + + N E+AL LF+ + +
Sbjct: 398 MENSLQLFSESPNCTDVSWNTVIVGY-------------VQAGNGEKALILFKDMLECQV 444
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
T+S VL+ACAG+ S +HSL K ++ +TV+ NALI YA+CG+I ++
Sbjct: 445 QGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARL 504
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD + HD VSWN+++ Y++HG EAL+ F +M +PD TFV +LSACS+AGL
Sbjct: 505 VFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGL 564
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ G F SM+E + + P +HY CMV LLGR G + +A KL+ E+P EP ++W LL
Sbjct: 565 LDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALL 624
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+C H + L ++A ++ ++EP D V +SNIY + + IR MK +RK
Sbjct: 625 SACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRK 684
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PGLSWIE + RVH F+ G HP + I LE L + + GYVP+ S L D+E+
Sbjct: 685 EPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVD 744
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE++L+ HSE+LAL + ++ S+ S +RI+KN+RIC DCH +KL S ++ ++I++
Sbjct: 745 KEQRLWVHSERLALAYGLIRTPSI----SPLRIIKNLRICADCHAAIKLISKIVQRDIII 800
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD NRFHHF + ICSC DYW
Sbjct: 801 RDMNRFHHFHEGICSCGDYW 820
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 217/453 (47%), Gaps = 46/453 (10%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+T IY +L +C +G+ LH +I DLF N L+N Y K+ L DA
Sbjct: 43 NTYIYGSLLQSCIRNGDCATGKYLHCEIIKK--GNCLDLFANNILLNFYVKYDSLPDAAK 100
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVL---ISCDY 119
LFDEMP RN VS+ LI GY+Q E LF L + N F ++VL +S ++
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 120 LH-GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
G VHA K D+ +V ALI+ YS A+ A +VF+ +E+++++SW M+A
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVA- 219
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
C +E + E E+L LF +++ G P+ TF+ VLKAC GL A
Sbjct: 220 ---CYVENECFE---------ESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKA 267
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH K + ++ + LI Y + G + + QVF++M D++ W+ ++ YA Q
Sbjct: 268 VHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQ 327
Query: 298 AKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
++EA+++F M V P+ T SLL AC+ +Q GN++ H + G+ +
Sbjct: 328 SEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQI-HCHVVKVGLDMNVFVSN 386
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG------------------SCRKHG 396
++D+ + GR+ + +L E P D +V++G C+ G
Sbjct: 387 ALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQG 446
Query: 397 -ETRLAEL--AATKLKQLEPGDSLGFVQMSNIY 426
E + + A + LEPG + + + IY
Sbjct: 447 TEVTYSSVLRACAGIAALEPGSQIHSLSVKTIY 479
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 346/591 (58%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + AC +++ Q+H ++ + D+ V+ L MY K G + DAR +F+
Sbjct: 249 YMNVLSACGSLAALEKGKQIHAQIVES--EHHSDVRVSTALTKMYIKCGAVKDAREVFEC 306
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
+P R+V++W +I G G EE +F +L+ P+ + ++L +C G
Sbjct: 307 LPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACG 366
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +HA A+K L + V NALINMYSK+ + +A +VF+ M R+V+SW +++ + C
Sbjct: 367 KEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADC 426
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
Q +E F+ F+++ ++G+ + T+ VLKAC+ V + +H+
Sbjct: 427 ---GQVVESFST----------FKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAE 473
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G D +ANAL+ Y +CGS+ + +V + M+ D+V+WN+++ A +G+ EA
Sbjct: 474 VVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEA 533
Query: 302 LQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQ F M ++P++ TFV+++SAC LV+EG + F SM +++G+VP HYACMVD
Sbjct: 534 LQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVD 593
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+L R G + EAE +I MP +P + +W LL +CR HG + E AA + +LEP ++
Sbjct: 594 ILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGT 653
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +S IY +G + +RK MK V+K PG SWIE+ VH F +G + HP+ E I
Sbjct: 654 YVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEI 713
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +LE L Q+K +GYVP+T +HD+++E KE + HHSEKLA+ + +++ +
Sbjct: 714 YSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPP----ET 769
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH K S + G+EI+ RD++RFHHFK+ CSC DYW
Sbjct: 770 PIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 214/416 (51%), Gaps = 28/416 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L +C ++ Q+HEH++ F +P ++++ N L+ +Y G +++AR LFD+
Sbjct: 47 YVKLLQSCVKAKDLAVGKQVHEHILR-FGMKP-NVYIINTLLKLYVHCGSVNEARRLFDK 104
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
++VVSW +ISGYA G +E F LF + Q P++F+ S+L +C G
Sbjct: 105 FSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWG 164
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ VH ++ L + V NALI+MY+K +A +VF+ M R+ +SW ++ A+
Sbjct: 165 REVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY--- 221
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ +E+L + + +EG+ P T+ VL AC L +H+
Sbjct: 222 ----------AESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQ 271
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I + D ++ AL Y +CG++ +++VF+ + D+++WN+++ GQ +EA
Sbjct: 272 IVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEA 331
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+F M V PD T++++LSAC+ G + G ++ H+ G+V + +++
Sbjct: 332 HGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEI-HARAVKDGLVSDVRFGNALIN 390
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
+ + G + +A ++ MP + D V W+ L+G G+ + E +T K L+ G
Sbjct: 391 MYSKAGSMKDARQVFDRMP-KRDVVSWTALVGGYADCGQ--VVESFSTFKKMLQQG 443
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 175/390 (44%), Gaps = 55/390 (14%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ + +L SC D GK VH L+F + +VY+ N L+ +Y +EA ++F
Sbjct: 43 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+ ++V+SWN MI+ + A +EA LF +Q+EG+ PD TF
Sbjct: 103 DKFSNKSVVSWNVMISGY-------------AHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L AC+ VH + + G ++ + NALI YA+CGS+ +++VFD M
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
D VSW ++ AYA G A+E+L+ + M V+P T++++LSAC +++G ++
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 338 HSMLENH------------------GVV----------PQLDHYA--CMVDLLGRVGRIL 367
++E+ G V P D A M+ L G++
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLE 329
Query: 368 EAEKLIREMPME---PDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMS 423
EA + M E PD V + +L +C + G E+ A +K D +
Sbjct: 330 EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALI 389
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
N+Y +GS AR + M V + L
Sbjct: 390 NMYSKAGSMKDARQVFDRMPKRDVVSWTAL 419
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+ + L ++G D + +L++C VH I ++G + + I N L+ Y
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
CGS++ ++++FDK + +VSWN ++ YA G +EA LF+ M ++PD TFVS
Sbjct: 91 HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+LSACS + G +V H + G+ ++ + + G + +A ++ M
Sbjct: 151 ILSACSSPAALNWGREV-HVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209
Query: 380 PDSVIWSVLLGSCRKHG 396
D V W+ L G+ + G
Sbjct: 210 -DEVSWTTLTGAYAESG 225
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/593 (39%), Positives = 344/593 (58%), Gaps = 34/593 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHM-----INNFPNEPQD-LFVTNHLINMYAKFGYLDDARHL 64
L C HG +H H+ ++++ +FV+N L++MYAKFG LDDA L
Sbjct: 78 LVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRL 137
Query: 65 FDEMPKRNVVSWTALISGYAQ-HGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG 122
FD MP+RNVV+WT +++ A G EE R ++ + PN ++ +SVL +C G
Sbjct: 138 FDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGT-PG 196
Query: 123 KL--VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
L +HA +K LD+ V+V ++LI+ Y K D +VF+ M R+++ WNS+IA F
Sbjct: 197 VLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFA 256
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
AIELF +MK+ G + + T + VL+AC G+V VH
Sbjct: 257 QSGDGVGAIELFMRMKDA-------------GFSANQGTLTSVLRACTGMVMLEAGRQVH 303
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + KY E D ++ NAL+ Y +CGS+ ++ +F +M D++SW++++ A +G++
Sbjct: 304 AHVLKY--ERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSA 361
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL++F M V P+ T V +L ACSHAGLV++G F SM + G+ P+ +H+ CM
Sbjct: 362 EALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCM 421
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G++ EA + IR+M +EPD+VIW LLG+CR H LA AA ++ +LEP D
Sbjct: 422 VDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQ 481
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V +SN Y + A K M+ ++K PG SWIE+E VH F +G HP +
Sbjct: 482 GARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSD 541
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I ++L LIG++ +GYVP+T L D+ E KE+ L +HSEK+A+ F M+
Sbjct: 542 TIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVG---- 597
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRIMKN+RIC DCH F KL S G+ I++RD RFHHF+D CSC DYW
Sbjct: 598 GKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/561 (40%), Positives = 341/561 (60%), Gaps = 29/561 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+DL+V L+ +Y K G + +A+ F+EMPK +++ W+ +IS YAQ ++E LFC +
Sbjct: 238 RDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRM 297
Query: 100 LQ--YFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
Q PN F+ ASVL +C L G +H+ LK LD++V+V+NAL+++Y+K C
Sbjct: 298 RQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAK-CG 356
Query: 154 D--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+ + K+F +N ++WN++I + ++ + E+AL LF +
Sbjct: 357 EIENSVKLFTGSTEKNEVAWNTIIVGY-------------VQLGDGEKALNLFSNMLGLD 403
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P T+S VL+A A LV +HSL K + D+V+AN+LI YA+CG I ++
Sbjct: 404 IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDAR 463
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
FDKM D VSWN+++ Y++HG EAL LF M N +P+ TFV +LSACS+AG
Sbjct: 464 LTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAG 523
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
L+ +G F SML+++G+ P ++HY CMV LLGR G+ EA KLI E+P +P ++W L
Sbjct: 524 LLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRAL 583
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
LG+C H L ++ A ++ ++EP D V +SN+Y + ++ +RK MK +V+
Sbjct: 584 LGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVK 643
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PGLSW+E + VH F G HP + IF LE L + + GYVP+ S+ L D+E++
Sbjct: 644 KEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDD 703
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE L+ HSE+LAL F ++ S C IRI+KN+RICVDCH +KL S ++ +EIV
Sbjct: 704 EKERLLWMHSERLALAFGLIQIPSGCS----IRIIKNLRICVDCHAVIKLVSKIVQREIV 759
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
+RD NRFHHF+ +CSC DYW
Sbjct: 760 IRDINRFHHFRQGVCSCGDYW 780
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 193/392 (49%), Gaps = 27/392 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA + + + LH H++ + DLF N L+N Y FG+L+DA LFDE
Sbjct: 6 YANMLQQAIRNRDPNAGKSLHCHILKH--GASLDLFAQNILLNTYVHFGFLEDASKLFDE 63
Query: 68 MPKRNVVSWTALISGYAQ-HGNAEECFRLFCSLLQYFFPNEF---SLASVLISCDYLHGK 123
MP N VS+ L G+++ H L + + N+F +L +L+S D
Sbjct: 64 MPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTC 123
Query: 124 L-VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
L VHA K A +V ALI+ YS D A +VF+ + F++++SW M+A +
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY--- 180
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ E++L LF Q++ G P+ T S LK+C GL + +VH
Sbjct: 181 ----------AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGC 230
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K ++ D + AL+ Y + G I+ ++Q F++M DL+ W+ ++ YA ++KEA
Sbjct: 231 ALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEA 290
Query: 302 LQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
L+LF M V P++ TF S+L AC+ L+ GN++ HS + G+ + ++
Sbjct: 291 LELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQI-HSCVLKVGLDSNVFVSNALM 349
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
D+ + G I + KL E + V W+ ++
Sbjct: 350 DVYAKCGEIENSVKLFTG-STEKNEVAWNTII 380
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/619 (35%), Positives = 354/619 (57%), Gaps = 41/619 (6%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T + ++ +ACA + + A +H+ +++ DL++ N LI+MY +F LD AR +
Sbjct: 115 TYTFPSVINACAGLLDFEMAKSIHDRVLD--MGFGSDLYIGNALIDMYCRFNDLDKARKV 172
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECF-------RLFCSLLQYFFPNEFSLASVLISC 117
F+EMP R+VVSW +LISGY +G E +LF ++ F P+ ++ S+L +C
Sbjct: 173 FEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQAC 232
Query: 118 DYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISW 171
+L GK VH + + +N LINMY+K C + + +VF M+ ++ +SW
Sbjct: 233 GHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK-CGNLLASQEVFSGMKCKDSVSW 291
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMA 213
NSMI + ++++F MK + L + +++ EG+
Sbjct: 292 NSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVT 351
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T +L C+ L +R +H I K G E D + N LI Y++CGS+ S QV
Sbjct: 352 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 411
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F M D+V+W +++ A ++G+ K+A++ F M + PD FV+++ ACSH+GLV
Sbjct: 412 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 471
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG FH M +++ + P+++HYAC+VDLL R + +AE I MP++PDS IW LL
Sbjct: 472 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 531
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR G+T +AE + ++ +L P D+ +V +SNIY G +++ R IRK +K ++K
Sbjct: 532 ACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKD 591
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG SW+EI+N+V+ F +G K Q E + K L L G + GY+ LHDI+E+ K
Sbjct: 592 PGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEK 651
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
+ L HSE+LA+ F ++N + + +++MKN+R+C DCH K S ++ +E++VR
Sbjct: 652 RDILCGHSERLAIAFGLLNT----KPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVR 707
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFH FKD CSC DYW
Sbjct: 708 DANRFHVFKDGACSCGDYW 726
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 24/240 (10%)
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
NV WNS+I A L + EAL L+ + QR + PD TF V+ AC
Sbjct: 79 NVYLWNSIIRALTHNGLFS-------------EALSLYSETQRIRLQPDTYTFPSVINAC 125
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
AGL+ A ++H + GF D I NALI Y R + +++VF++M D+VSWN
Sbjct: 126 AGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWN 185
Query: 287 SILKAYALHGQAKEALQ-------LFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
S++ Y +G EAL+ LF M +PD T S+L AC H G ++ G K
Sbjct: 186 SLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFG-KYV 244
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
H + G ++++ + G +L ++++ M + DSV W+ ++ ++G+
Sbjct: 245 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMINVYIQNGK 303
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 8/183 (4%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS + +A A T +HSLI G + + LI YA + S VF +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 279 -YHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQ-EG 333
+++ WNSI++A +G EAL L+S + +QPD+ TF S+++AC AGL+ E
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEM 133
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K H + + G L ++D+ R + +A K+ EMP+ D V W+ L+
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLISGYN 192
Query: 394 KHG 396
+G
Sbjct: 193 ANG 195
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/612 (37%), Positives = 353/612 (57%), Gaps = 37/612 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC+ ++K +H + + +D+FV L+N+YA + +A+ +FD M
Sbjct: 347 SSILPACSQLKDLKSGKTIHGFAVKH--GMVEDVFVCTALVNLYANCLCVREAQTVFDLM 404
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGK 123
P RNVV+W +L S Y G ++ +F + L P+ ++ S+L +C D GK
Sbjct: 405 PHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGK 464
Query: 124 LVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACK 182
++H A++ + V+V NAL+++Y+K C EA VF+ + R V SWN ++ A+ K
Sbjct: 465 VIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNK 524
Query: 183 LEAQAIELFAKMKNEE----------------------EALFLFRQLQREGMAPDWCTFS 220
+ + +F++M +E EA+ +FR++Q G PD T
Sbjct: 525 EYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIY 584
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L+AC+ R +H + ++ + D NAL+ YA+CG +SLS+ VFD M
Sbjct: 585 SILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK 644
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+ SWN+++ A +HG KEAL LF M V+PDSATF +LSACSH+ LV+EG ++F
Sbjct: 645 DVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIF 704
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+SM +H V P+ +HY C+VD+ R G + EA I+ MPMEP ++ W L CR +
Sbjct: 705 NSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKN 764
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
LA+++A KL +++P S +V + NI + +++A IRK MK + K PG SW
Sbjct: 765 VELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFH 824
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHH 517
+ NRVH F +G K + + + I+ L+EL ++K GY P+T LHDI++E K E L +H
Sbjct: 825 VGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNH 884
Query: 518 SEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHH 577
SEKLA+ F I+N +S IR+ KN+RIC DCHN +K S+++G IVVRDS RFHH
Sbjct: 885 SEKLAVAFGILNLNG----QSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHH 940
Query: 578 FKDRICSCNDYW 589
FK+ CSC D+W
Sbjct: 941 FKNGNCSCKDFW 952
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 211/437 (48%), Gaps = 61/437 (13%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ C+ ++K ++H ++ + +D+FV++ +N YAK + +A+ +FD M
Sbjct: 145 SSILPGCSDLQDLKSGKEIHGFVVRH--GMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGK 123
P R+VV+W +L S Y G ++ +F + L P+ +++ +L +C D GK
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262
Query: 124 LVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H ALK + +V+V+NAL+N+Y C EA VF+ M RNVI+WNS+ + + C
Sbjct: 263 AIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCG 322
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
++ L +FR++ G+ PD S +L AC+ L + +H
Sbjct: 323 FP-------------QKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFA 369
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K+G +D + AL++ YA C + ++ VFD M + ++V+WNS+ Y G ++ L
Sbjct: 370 VKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGL 429
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F M V+PD T +S+L ACS ++ G KV H HG+V + ++ L
Sbjct: 430 NVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG-KVIHGFAVRHGMVEDVFVCNALLSL 488
Query: 360 LGRVGRILEAEKLIREMP----------------------------------MEPDSVIW 385
+ + EA+ + +P ++ D + W
Sbjct: 489 YAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITW 548
Query: 386 SVLLGSCRKHGETRLAE 402
SV++G C K+ +R+ E
Sbjct: 549 SVVIGGCVKN--SRIEE 563
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 190/391 (48%), Gaps = 26/391 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ + ACA + + Q H+ D+ + N I+ Y K ++ AR +FD
Sbjct: 42 VFMAVAKACAASRDALKVKQFHDDATR--CGVMSDVSIGNAFIHAYGKCKCVEGARRVFD 99
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLH 121
++ R+VV+W +L + Y G ++ +F + L N +++S+L C D
Sbjct: 100 DLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKS 159
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK +H ++ + V+V++A +N Y+K C EA VF+ M R+V++WNS+ + +
Sbjct: 160 GKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVN 219
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
C ++ L +FR++ +G+ PD T S +L AC+ L + A+H
Sbjct: 220 CGFP-------------QKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHG 266
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K+G ++ ++NAL++ Y C + ++ VFD M + ++++WNS+ Y G ++
Sbjct: 267 FALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQK 326
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
L +F M V+PD S+L ACS ++ G K H HG+V + +V
Sbjct: 327 GLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG-KTIHGFAVKHGMVEDVFVCTALV 385
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+L + EA+ + MP + V W+ L
Sbjct: 386 NLYANCLCVREAQTVFDLMPHR-NVVTWNSL 415
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EA+ ++ + G+ PD F V KACA H + G D I NA I
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSA 315
HAY +C + +++VFD + D+V+WNS+ Y G ++ L +F M V+ +
Sbjct: 83 HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T S+L CS ++ G ++ H + HG+V + + V+ + + EA+ +
Sbjct: 143 TVSSILPGCSDLQDLKSGKEI-HGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 376 MPMEPDSVIWSVL 388
MP D V W+ L
Sbjct: 202 MPHR-DVVTWNSL 213
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/597 (38%), Positives = 349/597 (58%), Gaps = 41/597 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ +AC++ G+I Q ++ + + D V N LINMY+K G L+ AR +FD
Sbjct: 166 FSSALYACSVVGDISQGREIEARTVAS--GYASDSIVQNALINMYSKCGSLESARKVFDR 223
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-----FSLASVLISC----D 118
+ R+V++W +ISGYA+ G A + LF Q PN+ + +L +C D
Sbjct: 224 LKNRDVIAWNTMISGYAKQGAATQALELF----QRMGPNDPKPNVVTFIGLLTACTNLED 279
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIA 176
G+ +H + ++ + + N L+NMY+K S +EA +VFE + R+VI+WN +I
Sbjct: 280 LEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIV 339
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A+ + ++AL +F+Q+Q E +AP+ T S VL ACA L +R
Sbjct: 340 AY-------------VQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGK 386
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
AVH+LIA + D V+ N+L++ Y RCGS+ + VF + LVSW++++ AYA HG
Sbjct: 387 AVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
++ L+ F + + D T VS LSACSH G+++EG + F SM+ +HG+ P H+
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHF 506
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
CMVDLL R GR+ AE LI +MP PD+V W+ LL C+ H +T+ A A KL +LE
Sbjct: 507 LCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELES 566
Query: 414 GDSLGFVQ-MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
D V +SN+Y +G ++ +RK RK PG S+IEI + VHEF +G K H
Sbjct: 567 EDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSH 623
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+ E I +++ L Q+K GYVP+ + LH+++EE KE+ L +HSEKLA+ + +++
Sbjct: 624 PEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPP 683
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + I+KN+R CVDCH K S ++G++IVVRDS RFHHF++ CSC DYW
Sbjct: 684 ----GTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 214/409 (52%), Gaps = 35/409 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ C+ ++KQ LH ++ E D+ + LI MYA+ L+ AR FD
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETQLLE-FDIILGTALITMYARCRDLELARKTFD 118
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL----QYFFPNEFSLASVLISC----D 118
EM K+ +V+W ALI+GY+++G+ +++ ++ + P+ + +S L +C D
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD 178
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAA 177
G+ + A + + V NALINMYSK + + A KVF+ ++ R+VI+WN+MI+
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ QA+ELF +M + P+ TF +L AC L A
Sbjct: 239 YAKQGAATQALELFQRMGPNDP-------------KPNVVTFIGLLTACTNLEDLEQGRA 285
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H + ++G+E D VI N L++ Y +C S+ ++QVF+++ D+++WN ++ AY +G
Sbjct: 286 IHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYG 345
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
QAK+AL +F M NV P+ T ++LSAC+ G ++G K H+++ + +
Sbjct: 346 QAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG-KAVHALIASGRCKADVVLE 404
Query: 354 ACMVDLLGRVGRILEAEKL---IREMPMEPDSVIWSVLLGSCRKHGETR 399
++++ R G + + + IR+ + V WS L+ + +HG +R
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSL----VSWSTLIAAYAQHGHSR 449
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 195/373 (52%), Gaps = 24/373 (6%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFS 109
MY K G + DA +F + N VSWT +++ +A++G+ E + + L+ P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 110 LASVLISC----DYLHGKLVHALALKFSL-DAHVYVANALINMYSKSCADE--AWKVFEN 162
+ C D G+L+HA+ L+ L + + + ALI MY++ C D A K F+
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYAR-CRDLELARKTFDE 119
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
M + +++WN++IA + A++++ M ++ EGM PD TFS
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSP----------EGMKPDAITFSSA 169
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L AC+ + + + G+ D+++ NALI+ Y++CGS+ +++VFD++ D+
Sbjct: 170 LYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
++WN+++ YA G A +AL+LF M + +P+ TF+ LL+AC++ +++G + H
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG-RAIHR 288
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
++ HG L ++++ + LE + + E D + W++L+ + ++G+ +
Sbjct: 289 KVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAK 348
Query: 400 LAELAATKLKQLE 412
A L K QLE
Sbjct: 349 DA-LDIFKQMQLE 360
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/602 (37%), Positives = 359/602 (59%), Gaps = 39/602 (6%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
+ + ++H ++ N + DL V LINMY K G +AR +FD+M KR++VSW +I
Sbjct: 223 LPEGRKIHAEIVANGFD--TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMI 280
Query: 81 SGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLD 135
Y +G+ E L+ L ++ F + + S+L +C + G+LVH+ L+ LD
Sbjct: 281 GCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLD 340
Query: 136 AHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA---CKLEAQAIELF 191
+ V VA AL+NMY+K + +EA KVF M+ R+ ++W+++I A+ + K +A ++F
Sbjct: 341 SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVF 400
Query: 192 AKMKNEEE------------------ALFLFRQLQ-REGMAPDWCTFSIVLKACAGLVTE 232
++ + + A+ +FR++ G+ PD TF VL+ACA L
Sbjct: 401 DRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRL 460
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
A+H+ I++ E + V+ N LI+ YARCGS+ ++++F +VSW +++ A+
Sbjct: 461 SEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAF 520
Query: 293 ALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ +G+ EAL LF M+ V+PD T+ S+L C+H G +++G + F M E H + P
Sbjct: 521 SQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPT 580
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
DH+A MVDLLGR GR+ +A++L+ MP EPD V W L +CR HG+ L E AA ++
Sbjct: 581 ADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVY 640
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
+L+P + ++ MSNIY G + K +RK+M+ ++K PGLS+IE++ ++HEF+SGG
Sbjct: 641 ELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGG 700
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM- 528
K HP+ + I ++L L G ++ GYVP+T LHD+ E KE L +HSEK+A+ F ++
Sbjct: 701 KYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVS 760
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF-KDRICSCND 587
++GS IR++KN+R+C DCH K + + G++I+VRD NRFH F D CSC D
Sbjct: 761 SRGS----GEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGD 816
Query: 588 YW 589
YW
Sbjct: 817 YW 818
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 237/459 (51%), Gaps = 26/459 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ T+ +C+ G++ + LHE + +D V N LI+MY K L DAR +F+
Sbjct: 10 FLTVLCSCSSCGDVVEGRALHERI--RCSRFERDTMVGNALISMYGKCDSLVDARSVFES 67
Query: 68 MP--KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL-HGK 123
M +RNVVSW A+I+ YAQ+G++ E L+ + LQ + + SVL +C L G+
Sbjct: 68 MDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGR 127
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H LD+ +ANAL+ MY++ +A ++F++++ R+ SWN++I A
Sbjct: 128 EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ A+ +F +MK + + P+ T+ V+ + +H+ I
Sbjct: 188 DWSGALRIFKEMKCD--------------VKPNSTTYINVISGFSTPEVLPEGRKIHAEI 233
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
GF+ D V+A ALI+ Y +CGS +++VFDKM D+VSWN ++ Y L+G EAL
Sbjct: 234 VANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEAL 293
Query: 303 QLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+L+ ++++ ATFVS+L ACS + +G ++ HS + G+ ++ +V++
Sbjct: 294 ELYQKLDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNM 352
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
+ G + EA K+ M D+V WS L+G+ +G + A A +L D++ +
Sbjct: 353 YAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISW 411
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
M Y +G A I +EM G+ K +++I +
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 213/455 (46%), Gaps = 69/455 (15%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC+ ++ Q ++H + + + Q L N L+ MYA+FG + DA+ +F
Sbjct: 113 FVSVLGACS---SLAQGREIHNRVFYSGLDSFQSL--ANALVTMYARFGSVGDAKRMFQS 167
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY----LHGK 123
+ R+ SW A+I ++Q G+ R+F + PN + +V+ G+
Sbjct: 168 LQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGR 227
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA + D + VA ALINMY K + EA +VF+ M+ R+++SWN MI
Sbjct: 228 KIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGC----- 282
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ + EAL L+++L EG TF +L AC+ + VHS I
Sbjct: 283 --------YVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI 334
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE-- 300
+ G + + +A AL++ YA+CGS+ +++VF+ M D V+W++++ AYA +G K+
Sbjct: 335 LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDAR 394
Query: 301 --------------------------------ALQLFSNMN----VQPDSATFVSLLSAC 324
A+++F M ++PD+ TF+++L AC
Sbjct: 395 KARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ G + E K H+ + + + ++++ R G + EAE+L E V
Sbjct: 455 ASLGRLSE-VKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLF-AAAKEKTVVS 512
Query: 385 WSVLLGSCRKHGETRLAE----LAATKLKQLEPGD 415
W+ ++ + ++G R AE L+ ++P D
Sbjct: 513 WTAMVAAFSQYG--RYAEALDLFQEMDLEGVKPDD 545
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 159/296 (53%), Gaps = 29/296 (9%)
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWK 158
P+ + +VL SC D + G+ +H + V NALI+MY K C +A
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGK-CDSLVDARS 63
Query: 159 VFENMEFR--NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
VFE+M++R NV+SWN+MIAA+ A+ + EAL L+ ++ +G+ D
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAY-------------AQNGHSTEALVLYWRMNLQGLGTDH 110
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TF VL AC+ L R +H+ + G + +ANAL+ YAR GS+ +K++F
Sbjct: 111 VTFVSVLGACSSLAQGRE---IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQS 167
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGN 334
+ D SWN+++ A++ G AL++F M +V+P+S T+++++S S ++ EG
Sbjct: 168 LQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGR 227
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
K+ H+ + +G L ++++ G+ G EA ++ +M + D V W+V++G
Sbjct: 228 KI-HAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMIG 281
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/625 (37%), Positives = 354/625 (56%), Gaps = 63/625 (10%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+++ L +C G++ Q+H +I + +D F++NHL+N Y+K G + LF
Sbjct: 64 LFSHLLQSCIKLGSLFGGKQVHSLIITS--GGSKDKFISNHLLNFYSKLGQFKSSLVLFS 121
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF---------------CSLLQY--------- 102
MP+RNV+S+ LI+GY Q G+ E +LF L Q+
Sbjct: 122 NMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSL 181
Query: 103 --------FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK 150
F P+EF+L SVL C L G+ VHA LK + V ++L +MY K
Sbjct: 182 FKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK 241
Query: 151 SCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN--EEEALFLFRQL 207
S + + K+ ++M R V++WN++IA K +N EE L + +
Sbjct: 242 SGSLSDGEKLIKSMPIRTVVAWNTLIAG---------------KAQNGCPEEVLNQYNMM 286
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ G PD TF VL AC+ L T +H+ + K G + ++LI Y+R G +
Sbjct: 287 KMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCL 346
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
S + F D+V W+S++ AY HG+ +EAL+LF M ++ + TF+SLL AC
Sbjct: 347 EDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYAC 406
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH+GL ++G + F M++ + + P+++HY C+VDLLGR GR+ EAE +IR MP++PD +I
Sbjct: 407 SHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGII 466
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LL +C+ H E +AE + ++ +L+P D+ +V +SNI+ + ++ IRK M+
Sbjct: 467 WKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRD 526
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
VRK PG+SW+E++N VH+F+ G K HPQ I L+EL+ +LK GYVPE LHD
Sbjct: 527 RSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHD 586
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
++ E KE L HHSEK A+ FA+MN E IR+MKN+R+C DCHN +K S +
Sbjct: 587 MDNEEKEYNLAHHSEKFAIAFALMNTS----ENVPIRVMKNLRVCDDCHNAIKCISRIRN 642
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD++RFHHFKD CSC +YW
Sbjct: 643 REIIVRDASRFHHFKDGECSCGNYW 667
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/608 (38%), Positives = 349/608 (57%), Gaps = 38/608 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+ A A G I++A + + ++N PN + N +I Y + G L +A+ LF +M
Sbjct: 462 TAMMTAYAQVGRIQKARLIFDEILN--PN----VVAWNAIIAGYTQNGMLKEAKDLFQKM 515
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGK 123
P +N SW A+I+G+ Q+ + E L L + P++ S S L +C D G+
Sbjct: 516 PVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGR 575
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
++H+LA+K + YV N LI+MY+K ++ VF + ++ +SWNS+I+
Sbjct: 576 VIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENY 635
Query: 183 LEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLK 224
+ A +F KM E AL LF + G+ P+ T + +L
Sbjct: 636 MLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLS 695
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
AC L + H+LI K GF+ + N+LI Y +CG VF++M HDL++
Sbjct: 696 ACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLIT 754
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSML 341
WN++L A +G KEA+++F M V+ PD +F+ +L ACSHAGLV EG F+SM
Sbjct: 755 WNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMT 814
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ +G++P + HY CMVDLLGR G + EAE LI MP++PDSVIW LLG+CR H L
Sbjct: 815 QKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELG 874
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
+ A +L Q+ S +V +SN++ G ++K IRK MK + K PG+SWI+++N+
Sbjct: 875 QRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNK 934
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
+H F +G + H Q E I+ L+E G + GY+P+T+ LHD+EEE K+ +L +HSEKL
Sbjct: 935 LHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKL 994
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
A+VF I++ + S I+I+KN+RIC DCH FMK S + ++I++RD NRFHHF+D
Sbjct: 995 AVVFGILSTPN----GSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDG 1050
Query: 582 ICSCNDYW 589
CSC DYW
Sbjct: 1051 SCSCGDYW 1058
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 196/384 (51%), Gaps = 32/384 (8%)
Query: 39 PQD-LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
PQ LF N I + G +++AR +F+EM +R+VVSW ++I+GY+Q+G +E LF
Sbjct: 167 PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFD 226
Query: 98 SLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSL-DAHVYVANALINMYSKSCA-DE 155
+ F ++L++ G++ A + S+ + +V NA+I+ Y ++
Sbjct: 227 A----FVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKN 282
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE----------------- 198
A K+F+ M +NV SWNS++ + C ++A ELF +M
Sbjct: 283 ARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDY 342
Query: 199 -EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
EA +F ++ R PD F +VL A GL ++ + K G+E D V+ +A+
Sbjct: 343 WEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAI 402
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATF 317
++AY R GS+ L+ F+ M + SW +++ A+A G+ +A+QL+ + Q AT
Sbjct: 403 LNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ-TVATK 461
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
++++A + G +Q+ +F +L P + + ++ + G + EA+ L ++MP
Sbjct: 462 TAMMTAYAQVGRIQKARLIFDEILN-----PNVVAWNAIIAGYTQNGMLKEAKDLFQKMP 516
Query: 378 MEPDSVIWSVLLGSCRKHGETRLA 401
++ +S W+ ++ ++ E+R A
Sbjct: 517 VK-NSASWAAMIAGFVQNEESREA 539
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/558 (39%), Positives = 330/558 (59%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-L 99
D V+N LI MY K ++D +F+ M ++VSW AL+SG+ R+F L
Sbjct: 186 DNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQML 245
Query: 100 LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS-CAD 154
L+ F PN F+ SVL SC L GK VHA +K S D +V AL++MY+K+ C +
Sbjct: 246 LEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLE 305
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A F+ + R++ SW +I+ + A+ E+A+ FRQ+QREG+ P
Sbjct: 306 DAGVAFDRLVNRDIFSWTVIISGY-------------AQTDQAEKAVKYFRQMQREGIKP 352
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T + L C+ + T + +H++ K G D + +AL+ Y +CG + ++ +F
Sbjct: 353 NEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIF 412
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+ D+VSWN+I+ Y+ HGQ ++AL+ F M + PD ATF+ +LSACS GLV+
Sbjct: 413 KGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVE 472
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG K F SM + +G+ P ++HYACMVD+LGR G+ E + I EM + P S+IW +LG+
Sbjct: 473 EGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGA 532
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ HG E AA KL ++EP ++ +SNI+ G ++ R IR M ++K P
Sbjct: 533 CKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEP 592
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+E++ +VH F S HP+ I+ KL++L L +GYVP+T + LH++ + K
Sbjct: 593 GCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKM 652
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E LY+HSE+LAL FA+++ ++ IRI KN+RIC DCH+FMKL SD+ +EIVVRD
Sbjct: 653 EHLYYHSERLALSFALLSTNAV----KPIRIFKNLRICEDCHDFMKLISDITNQEIVVRD 708
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHFK CSC D W
Sbjct: 709 IRRFHHFKRGTCSCQDRW 726
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 206/402 (51%), Gaps = 26/402 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+T+ CA G++++ LH + + D F+ L++MY+K G + DA +F ++
Sbjct: 55 STVLKGCANTGSLREGKVLHALALRS--GCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI 112
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHGK 123
+VV+W+A+I+G Q G+ +E LF + + PN+F+L+S++ + D +G+
Sbjct: 113 RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172
Query: 124 LVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H K+ ++ V+N LI MY KS C ++ KVFE M +++SWN++++ F +
Sbjct: 173 SIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQ 232
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ +F Q+ EG P+ TF VL++C+ L+ VH+ I
Sbjct: 233 TCGRGPR-------------IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHI 279
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K +DD + AL+ YA+ + + FD++ D+ SW I+ YA QA++A+
Sbjct: 280 IKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAV 339
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+ F M ++P+ T S LS CSH ++ G ++ H++ G + + +VDL
Sbjct: 340 KYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL-HAVAVKAGHFGDIFVGSALVDL 398
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G+ G + AE + + + + D V W+ ++ +HG+ A
Sbjct: 399 YGKCGCMEHAEAIFKGL-ISRDIVSWNTIISGYSQHGQGEKA 439
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 196/386 (50%), Gaps = 28/386 (7%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC-- 117
A LF MP++N VSW AL++GYAQ G+ ++ +LFC + + ++F+L++VL C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
GK++HALAL+ + ++ +L++MYSK +A KVF + +V++W++M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I L+ Q + +EA LF ++R+G P+ T S ++ + R+
Sbjct: 124 ITG-----LDQQG--------HGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRY 170
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
++H I KYGFE D +++N LI Y + + +VF+ MT DLVSWN++L +
Sbjct: 171 GQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYD 230
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
++F M +P+ TF+S+L +CS + G +V +++N
Sbjct: 231 SQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFV 290
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
A +VD+ + R LE + + + D W+V++ + +T AE A +Q+
Sbjct: 291 GTA-LVDMYAKA-RCLEDAGVAFDRLVNRDIFSWTVIISG---YAQTDQAEKAVKYFRQM 345
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARL 437
+ + + + + CLSG + A L
Sbjct: 346 QR-EGIKPNEYTLASCLSGCSHMATL 370
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSA 323
+ L++++F M + VSWN++L YA G K+ L+LF M + T ++L
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHY-AC-MVDLLGRVGRILEAEKLIREMPMEPD 381
C++ G ++EG KV H++ G ++D + C +VD+ + G + +A K+ ++ PD
Sbjct: 61 CANTGSLREG-KVLHALALRSGC--EIDEFLGCSLVDMYSKCGTVYDALKVFTKI-RNPD 116
Query: 382 SVIWSVLLGSCRKHG 396
V WS ++ + G
Sbjct: 117 VVAWSAMITGLDQQG 131
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/599 (39%), Positives = 349/599 (58%), Gaps = 40/599 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ +L A +G ++ A ++ + + +D+ LI YA G AR +FD
Sbjct: 101 VHTSLISMYARNGGLEDARKVFD------ASSHRDVVSCTALITGYASRGDFRSARKVFD 154
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH---- 121
E+ +R+VVSW A+I+GY ++G EE LF +++ P+E +L SV+ +C
Sbjct: 155 EITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIEL 214
Query: 122 GKLVHALALKF----SLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
G+ VH+ + + + NALI++YSK C D A+ +FE + ++V+SWN++I
Sbjct: 215 GRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSK-CGDVETAFGLFEGLSCKDVVSWNTLI 273
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ L +EAL LF+++ R G P+ T VL ACA L
Sbjct: 274 GGYTHTNLY-------------KEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIG 320
Query: 236 SAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H I K G ++T + +LI YA+CG I + QVF+ M Y L SWN+++ +A
Sbjct: 321 RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFA 380
Query: 294 LHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+HG+A A LFS M V+PD TFV LLSACSH+GL+ G ++F SM +++ + P+L
Sbjct: 381 MHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKL 440
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HY CM+DLLG G EAE++I MPMEPD VIW LL +C+KHG LAE A KL +
Sbjct: 441 EHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIK 500
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
+EP +S +V +SNIY +G + +R + G ++K PG S IE+++ VHEF G K
Sbjct: 501 IEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDK 560
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP+R I+ LEE+ QL+ G+ P+TS L ++EEE KE L HHSEKLA+ F +++
Sbjct: 561 LHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 620
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + + I+KN+R+C +CH KL S + +EIV RD RFHHF+D +CSC DYW
Sbjct: 621 ----KPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 194/423 (45%), Gaps = 38/423 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASV 113
F L A +F+ + + N++ W ++ G+A + ++ ++ PN +S +
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70
Query: 114 LISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +HA LK YV +LI+MY+++ ++A KVF+ R+V
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQRE 210
+S ++I + + A ++F ++ EEAL LF+++ R
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLI----AKYGFEDDTVIANALIHAYARCGS 266
+ PD T V+ ACA + VHS + +GF I NALI Y++CG
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ + +F+ ++ D+VSWN+++ Y KEAL LF M P+ T +S+L A
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310
Query: 324 CSHAGLVQEGNKVFHSMLEN--HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
C+H G + G + H ++ GV + ++D+ + G I A ++ M
Sbjct: 311 CAHLGAIDIG-RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLK--QLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
S W+ ++ HG A ++++ ++EP D + FV + + SG + R I
Sbjct: 370 SS-WNAMIFGFAMHGRANAAFDLFSRMRGNRVEP-DDITFVGLLSACSHSGLLDLGRQIF 427
Query: 440 KEM 442
K M
Sbjct: 428 KSM 430
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/589 (39%), Positives = 351/589 (59%), Gaps = 27/589 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ Y+ L C H + + + H+ N ++P +F+ N LINMY KF L+DA
Sbjct: 12 DSATYSELIKCCLSHRAVHEGNLICRHLYFN-GHQPM-MFLVNVLINMYVKFNLLNDAHQ 69
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG 122
LFD+MP+RNV+SWT +IS Y++ ++ L +L+ PN ++ +SVL +C+ +
Sbjct: 70 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSD 129
Query: 123 -KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
+++H +K L++ VYV +ALI++++K ++A VF+ M + I WNS+I F
Sbjct: 130 VRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF-- 187
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ + AL LF++++R G + T + VL+AC GL H
Sbjct: 188 -----------AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 236
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I KY + D ++ NAL+ Y +CGS+ +++VF++M D+++W++++ A +G ++E
Sbjct: 237 HIVKY--DQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQE 294
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M +P+ T V +L ACSHAGL+++G F SM + +G+ P +HY CM+
Sbjct: 295 ALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMI 354
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLG+ G++ +A KL+ EM EPD+V W LLG+CR LAE AA K+ L+P D+
Sbjct: 355 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAG 414
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+ +SNIY S ++ IRK M+ ++K PG SWIE+ ++H F G + HPQ
Sbjct: 415 TYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVE 474
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ KKL +LI +L G+GYVPET+ L D+E E E+ L HHSEKLAL F +M S
Sbjct: 475 VNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPS----E 530
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
VIRI KN+RIC DCH F KLAS L + IV+RD R+HHF+D CSC
Sbjct: 531 KVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 54/280 (19%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVH--SLIAKY----GFEDDTVIANALIHA 260
LQ G+ D T+S ++K C ++ R AVH +LI ++ G + + N LI+
Sbjct: 4 LQSHGLWADSATYSELIKCC---LSHR---AVHEGNLICRHLYFNGHQPMMFLVNVLINM 57
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYA---LHGQAKEALQLFSNMNVQPDSATF 317
Y + ++ + Q+FD+M +++SW +++ AY+ +H +A E L L V+P+ T+
Sbjct: 58 YVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTY 117
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
S+L AC+ V ++ H + G+ + + ++D+ ++G +A + EM
Sbjct: 118 SSVLRACNGMSDV----RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEM- 172
Query: 378 MEPDSVIWSVLLGSCRKHGETRLA-EL---------------------AATKLKQLEPG- 414
+ D+++W+ ++G ++ + +A EL A T L LE G
Sbjct: 173 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 232
Query: 415 -----------DSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
D + + ++YC GS AR + +MK
Sbjct: 233 QAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMK 272
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/555 (40%), Positives = 331/555 (59%), Gaps = 26/555 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY- 102
V L++MYAK G + DAR F+ +P +V+ + +IS YAQ E+ F LF L++
Sbjct: 281 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 340
Query: 103 FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
PNE+SL+SVL +C + GK +H A+K ++ ++V NAL++ Y+K + D +
Sbjct: 341 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 400
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K+F ++ N +SWN+++ F L EEAL +F ++Q M
Sbjct: 401 KIFSSLRDANEVSWNTIVVGFSQSGLG-------------EEALSVFCEMQAAQMPCTQV 447
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+S VL+ACA + RHA +H I K F +DTVI N+LI YA+CG I + +VF +
Sbjct: 448 TYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL 507
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
D++SWN+I+ YALHGQA +AL+LF MN V+ + TFV+LLS C GLV G
Sbjct: 508 MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGL 567
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+F SM +HG+ P ++HY C+V LLGR GR+ +A + I ++P P +++W LL SC
Sbjct: 568 SLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCII 627
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H L +A K+ ++EP D +V +SN+Y +GS ++ L+RK M+ VRK PGLS
Sbjct: 628 HKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 687
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W+EI+ +H F+ G HP I LE L + GY+P+ ++ LHD+++E K L
Sbjct: 688 WVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRML 747
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
+ HSE+LAL + ++ + IRI+KN+R C+DCH + S ++ +EI+VRD NR
Sbjct: 748 WVHSERLALAYGLV----MTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINR 803
Query: 575 FHHFKDRICSCNDYW 589
FHHF+D CSC DYW
Sbjct: 804 FHHFEDGKCSCGDYW 818
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 149/349 (42%), Gaps = 50/349 (14%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A C G+ + +H H++ DLF N L+NMY K G L AR LFD M
Sbjct: 63 ARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRM 122
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLISCDYLH 121
P+RN+VS+ L+ +AQ G+ E LF L Q+ LA + +
Sbjct: 123 PERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAG 182
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G VH+ A K D + +V + LI+ YS S +A VF + ++ + W +M++ +
Sbjct: 183 G--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSE 240
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A FR Q +C+ L +H
Sbjct: 241 NDCPENA----------------FRCAQ----------------SCSLLAISCARQGIHG 268
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K + + + AL+ YA+CG I ++ F+ + Y D++ + ++ YA Q ++
Sbjct: 269 CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQ 328
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
A +LF + +V P+ + S+L AC++ +VQ F + NH +
Sbjct: 329 AFELFLRLMRSSVLPNEYSLSSVLQACTN--MVQLD---FGKQIHNHAI 372
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 162/357 (45%), Gaps = 34/357 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC + Q+H H I DLFV N L++ YAK +D + +F +
Sbjct: 349 SSVLQACTNMVQLDFGKQIHNHAIK--IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 406
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGK 123
N VSW ++ G++Q G EE +FC + P + + +SVL +C H
Sbjct: 407 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 466
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H K + + + N+LI+ Y+K C +A KVF+++ R++ISWN++I+ +
Sbjct: 467 QIHCSIEKSTFNNDTVIGNSLIDTYAK-CGYIRDALKVFQHLMERDIISWNAIISGY--- 522
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA-SAVHS 240
L QA +AL LF ++ + + + TF +L C H S S
Sbjct: 523 ALHGQA----------ADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDS 572
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQ-VFDKMTYHDLVSWNSILKAYALHGQAK 299
+ +G + ++ R G ++ + Q + D + + W ++L + +H
Sbjct: 573 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV- 631
Query: 300 EALQLFSN---MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV--VPQL 350
AL FS + ++P D T+V L + + AG + + + SM N GV VP L
Sbjct: 632 -ALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSM-RNIGVRKVPGL 686
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 5 TQI-YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
TQ+ Y+++ ACA +I+ A Q+H + + N D + N LI+ YAK GY+ DA
Sbjct: 445 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN--NDTVIGNSLIDTYAKCGYIRDALK 502
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
+F + +R+++SW A+ISGYA HG A + LF
Sbjct: 503 VFQHLMERDIISWNAIISGYALHGQAADALELF 535
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 24/197 (12%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFS----LDAHVYVANALINMYSK-SCADEA 156
+ F+ A L C D G+ VH ++ LD ++ AN L+NMY K A
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLD--LFCANVLLNMYGKLGPLASA 115
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
++F+ M RN++S+ +++ A A+ + E A LFR+L+ EG +
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAH-------------AQRGDFEAAAALFRRLRWEGHEVNQ 162
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
+ +LK + A VHS K G + + + + LI AY+ C +S ++ VF+
Sbjct: 163 FVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNG 222
Query: 277 MTYHDLVSWNSILKAYA 293
+ D V W +++ Y+
Sbjct: 223 IVRKDAVVWTAMVSCYS 239
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/574 (39%), Positives = 330/574 (57%), Gaps = 31/574 (5%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
++H+H + D V + I+MY + G +DDAR LFD++ R+V +W A+I G AQ
Sbjct: 545 EVHKHAVET--GLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQ 602
Query: 86 HGNAEECFRLFCSL-LQYFFPNEFSLASVL---ISCDYLHG-KLVHALALKFSLDAHVYV 140
E LF + + F P+ + ++L + + L K VH+ A L + V
Sbjct: 603 QRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRV 661
Query: 141 ANALINMYSKSCADEAW--KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
NAL++ YSK C + + +VF++M RNV +W MI A+
Sbjct: 662 GNALVHTYSK-CGNVKYAKQVFDDMVERNVTTWTMMIGGL-------------AQHGCGH 707
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+A F Q+ REG+ PD T+ +L ACA VH+ G D + NAL+
Sbjct: 708 DAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALV 767
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
H YA+CGSI ++ VFD M D+ SW ++ A HG+ EAL F M +P+
Sbjct: 768 HMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGY 827
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
++V++L+ACSHAGLV EG + F SM +++G+ P ++HY CMVDLLGR G + EAE I
Sbjct: 828 SYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILN 887
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MP+EPD W LLG+C +G +AE AA + +L+P + +V +SNIY +G + +
Sbjct: 888 MPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQK 947
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
L+R M+ +RK PG SWIE++NR+H F G HP+ + I+ +L +LI +LK GYV
Sbjct: 948 LLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYV 1007
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNF 555
P+T L L + ++EHKE+ L HSEKLA+V+ +M+ S + IR+ KN+R+C DCH
Sbjct: 1008 PDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQS----KDPIRVYKNLRVCSDCHTA 1063
Query: 556 MKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S + G+EIV RD+ RFHHFKD +CSC DYW
Sbjct: 1064 TKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 200/399 (50%), Gaps = 26/399 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + C +I A Q+H +I + Q+L+V N L+ +Y + G L AR +FD+
Sbjct: 121 YVNILQRCLKQEDILLAKQVHVCIIKS--GMEQNLYVANKLLRVYIRCGRLQCARQVFDK 178
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHG 122
+ K+N+ WT +I GYA++G+AE+ R++ + Q PNE + S+L +C + G
Sbjct: 179 LLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWG 238
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +HA ++ + V V AL+NMY K ++A +F+ M RNVISW MI
Sbjct: 239 KKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGL--- 295
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A +EA LF Q+QREG P+ T+ +L A A VHS
Sbjct: 296 ----------AHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSH 345
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
G D + NAL+H YA+ GSI ++ VFD MT D+ SW ++ A HG+ +EA
Sbjct: 346 AVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEA 405
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGL-VQEGNKVFHSMLENHGVVPQLDHYACMV 357
LF M P+ T++S+L+A + A E KV H E G + L ++
Sbjct: 406 FSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALI 465
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + G I +A +L+ + + D + W+ ++G ++G
Sbjct: 466 HMYAKCGSIDDA-RLVFDGMCDRDVISWNAMMGGLAQNG 503
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 208/407 (51%), Gaps = 29/407 (7%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ ++ Y ++ +A A G ++ ++H H +N DL V N L++MYAK G +DD
Sbjct: 316 FIPNSYTYVSILNANASAGALEWVKEVHSHAVN--AGLALDLRVGNALVHMYAKSGSIDD 373
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSL-----ASVL 114
AR +FD M +R++ SWT +I G AQHG +E F LF + + PN + AS +
Sbjct: 374 ARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAI 433
Query: 115 ISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWN 172
S L K+VH A + + + + NALI+MY+K D+A VF+ M R+VISWN
Sbjct: 434 ASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 493
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+M+ A+ EA +F Q+Q+EG+ PD T+ +L
Sbjct: 494 AMMGGL-------------AQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDAL 540
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+ VH + G D + +A IH Y RCGSI ++ +FDK++ + +WN+++
Sbjct: 541 EWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGA 600
Query: 293 ALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
A +EAL LF M + PD+ TF+++LSA + E K HS + G+V
Sbjct: 601 AQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEAL-EWVKEVHSHATDAGLV-D 658
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
L +V + G + A+++ +M +E + W++++G +HG
Sbjct: 659 LRVGNALVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQHG 704
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/613 (37%), Positives = 357/613 (58%), Gaps = 37/613 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ TL CA N Q Q+H H+I N +++ V L++MY++ G L+ A+ +F+
Sbjct: 482 FTTLLTLCANQRNDNQGRQIHAHLIR--ANITKNIIVETELVHMYSECGRLNYAKEIFNR 539
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHG 122
M +RN SW ++I GY Q+G +E RLF + L P+ FSL+S+L SC D G
Sbjct: 540 MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 599
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H ++ +++ + L++MY+K D AWKV++ ++VI N M++AF
Sbjct: 600 RELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNS 659
Query: 182 KLEAQAIELFAKMKNEEEALFL------------------FRQLQREGMAPDWCTFSIVL 223
A LF +M+ AL+ F ++ + D T ++
Sbjct: 660 GRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV 719
Query: 224 KACAGLVTERHASAVHSLIAKYGFED-DTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
C+ L H +HSLI K GF + V+ AL+ Y++CG+I+ ++ VFD M ++
Sbjct: 720 NLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNI 779
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
VSWN+++ Y+ HG +KEAL L+ M + P+ TF+++LSACSH GLV+EG ++F S
Sbjct: 780 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTS 839
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
M E++ + + +HY CMVDLLGR GR+ +A++ + +MP+EP+ W LLG+CR H +
Sbjct: 840 MQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMD 899
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
+ LAA +L +L+P + +V MSNIY +G + + IR+ MK V+K PG+SWIEI
Sbjct: 900 MGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEIN 959
Query: 460 NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH---DIEEEHKEEQLYH 516
+ + F +G K HP+ E I+ L L Q KG+GY+P+TS L DI+EE +EE L
Sbjct: 960 SEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQ 1019
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSE+LAL +++ ++S IR+ KN+RIC DCH K S + G+ I+ RD+NRFH
Sbjct: 1020 HSERLALSLGLIS----LPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFH 1075
Query: 577 HFKDRICSCNDYW 589
HF++ CSC DYW
Sbjct: 1076 HFENGKCSCGDYW 1088
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 215/417 (51%), Gaps = 35/417 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+A+ C + Q+H +I F D FV N LI+MYAK + +FD
Sbjct: 279 FASALRVCGALRSRDGGKQVHSKLIACGFKG---DTFVGNALIDMYAKCDDEESCLKVFD 335
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLIS----CDYLH 121
EM +RN V+W ++IS AQ G+ + LF + + + N F+L S+L++ D
Sbjct: 336 EMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGK 395
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +H ++ L++ + + +AL++MYSK +EA +VF ++ RN +S+N+++A +
Sbjct: 396 GRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ 455
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+A+EL+ M++E+ G+ PD TF+ +L CA + +H+
Sbjct: 456 EGKAEEALELYHDMQSED------------GIQPDQFTFTTLLTLCANQRNDNQGRQIHA 503
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ + + ++ L+H Y+ CG ++ +K++F++M + SWNS+++ Y +G+ +E
Sbjct: 504 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 563
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG----NKVFHSMLENHGVVPQLDHY 353
AL+LF M ++PD + S+LS+C Q+G N + + +E G++
Sbjct: 564 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ----- 618
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+VD+ + G + A K + + ++ D ++ +V++ + G A+ +++Q
Sbjct: 619 VVLVDMYAKCGSMDYAWK-VYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQ 674
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 238/492 (48%), Gaps = 38/492 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD---ARHL 64
Y++L C + ++ +H MI+N N D ++ ++ +YA+ G LDD AR L
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNP--DAYLMTKILMLYARSGCLDDLCYARKL 131
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISC----DY 119
F+EMP+RN+ +W +I YA+ + E RL+ + F ++F+ SV+ +C D
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDM 191
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ + + +K L+ +++V AL++ Y++ D+A + +E +V++WN++IA +
Sbjct: 192 GGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGY 251
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
K+ + EEA +F ++ + G+ PD TF+ L+ C L + V
Sbjct: 252 -------------VKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQV 298
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
HS + GF+ DT + NALI YA+C +VFD+M + V+WNSI+ A A G
Sbjct: 299 HSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHF 358
Query: 299 KEALQLFSNMNVQPDSATFVSLLSAC-SHAGLVQEG-NKVFHSMLENHGVVPQLDHYACM 356
+AL LF M + +L S + AGL G + H L + + + + +
Sbjct: 359 NDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSAL 418
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG-- 414
VD+ + G + EA ++ R + +E + V ++ LL + G+ A L Q E G
Sbjct: 419 VDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAGYVQEGKAEEA-LELYHDMQSEDGIQ 476
Query: 415 -DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR-VHEFASGGKRH 472
D F + + + N+ R I + + + K I +E VH ++ G+ +
Sbjct: 477 PDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN-----IIVETELVHMYSECGRLN 531
Query: 473 PQREAIFKKLEE 484
+E IF ++ E
Sbjct: 532 YAKE-IFNRMAE 542
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/601 (37%), Positives = 343/601 (57%), Gaps = 34/601 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S Q Y L C ++ +++H H+++N QD F+ LI MY+ G +D AR
Sbjct: 76 SQQTYELLILCCGHRSSLSDGLRVHRHILDN--GSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISC----- 117
+FD+ KR + W AL G+ EE L+ + + ++ F+ VL +C
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 118 --DYL-HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
D+L GK +HA + ++HVY+ L++MY++ C D A VF M RNV+SW++
Sbjct: 194 TADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSA 253
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM--APDWCTFSIVLKACAGLVT 231
MIA + AK EAL FR++ E +P+ T VL+ACA L
Sbjct: 254 MIACY-------------AKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAA 300
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+H I + G + + +AL+ Y RCG + + ++VFD+M D+VSWNS++ +
Sbjct: 301 LEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISS 360
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
Y +HG ++A+Q+F M P TFVS+L ACSH GLV+EG ++F SM +HG+ P
Sbjct: 361 YGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKP 420
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
Q++HYACMVDLLGR R+ EA K++++M EP +W LLGSCR HG LAE A+ +L
Sbjct: 421 QVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
LEP ++ +V +++IY + +++ + ++K ++ ++K PG W+E+ +++ F S
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSM 540
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+ +P E I L +L +K GY+P+T L+++E E KE + HSEKLAL F ++
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLI 600
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
N + IRI KN+R+C DCH F K S + KEI+VRD NRFH FK+ +CSC DY
Sbjct: 601 NTS----KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDY 656
Query: 589 W 589
W
Sbjct: 657 W 657
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
Q I+ K ++AL R L +E +P T+ +++ C + VH I
Sbjct: 51 QLIQSLCKEGKLKQAL---RVLSQES-SPSQQTYELLILCCGHRSSLSDGLRVHRHILDN 106
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G + D +A LI Y+ GS+ +++VFDK + WN++ +A L G +E L L+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 306 SNMN---VQPDSATFVSLLSACSHAGLVQE---GNKVFHSMLENHGVVPQLDHYACMVDL 359
MN V+ D T+ +L AC + + K H+ L G + +VD+
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDM 226
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
R G + A + MP+ + V WS ++ K+G+
Sbjct: 227 YARFGCVDYASYVFNGMPVR-NVVSWSAMIACYAKNGK 263
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/558 (40%), Positives = 330/558 (59%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV L+ +Y+K G+L DAR +FDE+P++NVVSWTA+I GY + G E LF LL
Sbjct: 136 DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLL 195
Query: 101 QYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
+ P+ F+L +L +C D G+ + + +V+VA +L++MY+K + +
Sbjct: 196 EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSME 255
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA +VF+ M ++V+ W+++I + A +EAL +F ++QRE + P
Sbjct: 256 EARRVFDGMVEKDVVCWSALIQGY-------------ASNGMPKEALDVFFEMQRENVRP 302
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D V AC+ L + L+ F + V+ ALI YA+CGS++ +K+VF
Sbjct: 303 DCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVF 362
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
M D V +N+++ A+ G A +F M +QPD TFV LL C+HAGLV
Sbjct: 363 KGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVD 422
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G++ F M V P ++HY CMVDL R G ++EA+ LIR MPME +S++W LLG
Sbjct: 423 DGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGG 482
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR H +T+LAE +L +LEP +S +V +SNIY S +++A IR + ++K P
Sbjct: 483 CRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLP 542
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+E++ VHEF G HP I++KLE L L+ GY P T L D+EEE KE
Sbjct: 543 GCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKE 602
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L HSEKLA+ FA+++ G+ + VIR++KN+R+C DCH +KL S + G+EI+VRD
Sbjct: 603 YFLGCHSEKLAVAFALISTGA----KDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRD 658
Query: 572 SNRFHHFKDRICSCNDYW 589
+NRFHHF + CSC DYW
Sbjct: 659 NNRFHHFTEGSCSCRDYW 676
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 178/360 (49%), Gaps = 25/360 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
QD ++ N L+ F A +F + P N+ + LI G + + ++ S+
Sbjct: 33 QDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASM 92
Query: 100 LQY-FFPNEFSLASVLISCD----YLH-GKLVHALALKFSLDAHVYVANALINMYSKSC- 152
Q+ F P+ F+ VL +C Y H G +H+L +K D V+V L+ +YSK+
Sbjct: 93 RQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGF 152
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+A KVF+ + +NV+SW ++I + +E+ EAL LFR L G+
Sbjct: 153 LTDARKVFDEIPEKNVVSWTAIICGY----IESGCF---------GEALGLFRGLLEMGL 199
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD T +L AC+ + + + + G + +A +L+ YA+CGS+ +++
Sbjct: 200 RPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARR 259
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD M D+V W+++++ YA +G KEAL +F M NV+PD V + SACS G
Sbjct: 260 VFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGA 319
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++ GN +++ + ++D + G + +A+++ + M D V+++ ++
Sbjct: 320 LELGNWA-RGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGM-RRKDCVVFNAVI 377
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 20/284 (7%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRAC 181
K H L L+ L Y+ N L+ A + A VF N+ +N++I +
Sbjct: 20 KQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSN 79
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS-AVHS 240
A+ ++A M+ + G APD TF VLKAC L H ++HS
Sbjct: 80 DAFRDAVSVYASMR-------------QHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHS 126
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L+ K GF+ D + L+ Y++ G ++ +++VFD++ ++VSW +I+ Y G E
Sbjct: 127 LVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGE 186
Query: 301 ALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL LF M ++PDS T V +L ACS G + G + M E+ G V + +V
Sbjct: 187 ALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRES-GSVGNVFVATSLV 245
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D+ + G + EA ++ M +E D V WS L+ +G + A
Sbjct: 246 DMYAKCGSMEEARRVFDGM-VEKDVVCWSALIQGYASNGMPKEA 288
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 223 LKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
LK C GL + A H L+ + G DT + N L+ + + + VF + +
Sbjct: 5 LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHP 64
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS------HAGLVQ 331
++ +N++++ + ++A+ ++++M PD+ TF +L AC+ H GL
Sbjct: 65 NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL-- 122
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
HS++ G + +V L + G + +A K+ E+P E + V W+ ++
Sbjct: 123 ----SLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVSWTAII 175
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/655 (35%), Positives = 355/655 (54%), Gaps = 72/655 (10%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ ++ + ACA +K A Q+H I + D FV + L++MY K + D
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHG--IASVSGFDSDSFVQSSLVHMYIKCNQIRD 167
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--------------------- 99
A +FD M + +VVSW+AL++ YA+ G +E RLF +
Sbjct: 168 AHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNH 227
Query: 100 ---------------LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYV 140
L+ F P+ +++SVL + D + G L+H +K L + V
Sbjct: 228 SGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCV 287
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE- 198
++ALI+MY K SC E +VF+ M+ +V S N+ I ++ LF ++K++
Sbjct: 288 SSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGM 347
Query: 199 ---------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
EAL LFR++Q G+ P+ T +L AC + H A
Sbjct: 348 ELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKA 407
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H + G D + +ALI YA+CG I S+ FD + +LV WN+++ YA+HG+
Sbjct: 408 AHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGK 467
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
AKEA+++F M +PD +F +LSACS +GL +EG+ F+SM +G+ +++HYA
Sbjct: 468 AKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYA 527
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMV LL R G++ +A +IR MP+ PD+ +W LL SCR H L E+AA KL +LEP
Sbjct: 528 CMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS 587
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ ++ +SNIY G +N+ +R MK +RK PG SWIE++N+VH +G K HPQ
Sbjct: 588 NPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQ 647
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I +KL++L ++K +GY PE + L D+EE+ KE+ L HSEKLA+VF ++N
Sbjct: 648 MTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNT---- 703
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++++KN+RIC DCH +K S +EI VRD+NRFHHFK+ CSC DYW
Sbjct: 704 PPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 188/448 (41%), Gaps = 70/448 (15%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++ Q Q H H++ D + L++ YA DA + D +P+ NV S++ L
Sbjct: 28 SLSQTRQAHAHILKT--GLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTL 85
Query: 80 ISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHG----KLVHALALKFSL 134
I +++ F +L + P+ L S + +C L + VH +A
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
D+ +V ++L++MY K + +A +VF+ M +V+SW++++AA+ +A LF++
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205
Query: 194 MKNE----------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
M + EA+ +F + G PD T S VL A L
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD---------- 281
+H + K G D +++ALI Y +C S QVFD+M + D
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 282 -------------------------LVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
+VSW S++ + +G+ EAL+LF M V+P+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPN 385
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
S T LL AC + + G K H G+ + + ++D+ + GRI +
Sbjct: 386 SVTIPCLLPACGNIAALMHG-KAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICF 444
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLA 401
+P + + V W+ ++ HG+ + A
Sbjct: 445 DGIPTK-NLVCWNAVIAGYAMHGKAKEA 471
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/588 (39%), Positives = 351/588 (59%), Gaps = 27/588 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L C + + + + H+ N + P +F+ N LINMY KF L+DA LFD+
Sbjct: 64 YSELIKCCISNRAVHEGNLICRHLYFN-GHRPM-MFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG-KLV 125
MP+RNV+SWT +IS Y++ ++ L +L+ PN ++ +SVL SC+ + +++
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H +K L++ V+V +ALI++++K ++A VF+ M + I WNS+I F
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF------ 235
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
A+ + AL LF++++R G + T + VL+AC GL H I K
Sbjct: 236 -------AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
Y + D ++ NAL+ Y +CGS+ + +VF++M D+++W++++ A +G ++EAL+L
Sbjct: 289 Y--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M +P+ T V +L ACSHAGL+++G F SM + +G+ P +HY CM+DLLG
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
+ G++ +A KL+ EM EPD+V W LLG+CR LAE AA K+ L+P D+ +
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY S ++ IR M+ ++K PG SWIE+ ++H F G HPQ + KK
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKK 526
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L +LI +L G+GYVPET+ L D+E E E+ L HHSEKLAL F +M +L E+ VIR
Sbjct: 527 LNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM---TLPIEK-VIR 582
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I KN+RIC DCH F KLAS L + IV+R R+HHF+D CSC DYW
Sbjct: 583 IRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 36/224 (16%)
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH--SLIAKY----GFE 248
++ A+ LQ G+ D T+S ++K C ++ R AVH +LI ++ G
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCC---ISNR---AVHEGNLICRHLYFNGHR 93
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA---LHGQAKEALQLF 305
+ N LI+ Y + ++ + Q+FD+M +++SW +++ AY+ +H +A E L L
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 306 SNMNVQPDSATFVSLLSACS--------HAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
NV+P+ T+ S+L +C+ H G+++EG LE+ V + ++
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG-------LESDVFV-----RSALI 201
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D+ ++G +A + EM + D+++W+ ++G ++ + +A
Sbjct: 202 DVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/593 (38%), Positives = 342/593 (57%), Gaps = 33/593 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I T+ A ALH Q +H + I NF + ++ + L++MYAK L AR +F+
Sbjct: 216 ILPTIGQANALH----QGKAIHAYYIRNFFFD--NVVLQTALLDMYAKCHLLFYARKIFN 269
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISC----DYL 120
+ K+N V W+A+I GY H + + L+ +L + P +LA++L +C D
Sbjct: 270 TVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLK 329
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
GK +H +K +D V N+LI+MY+K D A + M ++ +S++++I+
Sbjct: 330 RGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISG-- 387
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C A E+AL +FRQ+Q G+AP T +L AC+ L +H + H
Sbjct: 388 -CVQNGYA----------EKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCH 436
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
GF +DT I NA+I Y++CG I++S+++FD+M D++SWN+++ Y +HG
Sbjct: 437 GYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCV 496
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL LF + ++PD T +++LSACSH+GLV EG F SM +N + P++ HY CM
Sbjct: 497 EALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICM 556
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLL R G + EA I+ MP P+ IW LL +CR H + E + K++ L P +
Sbjct: 557 VDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGT 616
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
FV MSNIY G ++ A IR + +K PG SW+EI +H F G + HPQ
Sbjct: 617 GNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSA 676
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
+I KKL+EL+ Q+K +GY ++S LHD+EEE KE+ L +HSEK+A+ F I+N R
Sbjct: 677 SINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSR- 735
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I + KN+RICVDCH+ +K + L +EI VRD++RFHHFKD IC+C D+W
Sbjct: 736 ---ILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 182/365 (49%), Gaps = 32/365 (8%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY 119
ARH+FD++PK +VV W +I YA G ++ L+ +LQ P F+ +L +C
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENM--EFRNVISW 171
L G+L+H A L +YV+ AL++MY+K C +A +F ++ + R++++W
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAK-CGHLYQAQTLFNSISHQDRDIVAW 178
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
N+MIAAF L AQ I A Q+Q+ G+ P+ T +L
Sbjct: 179 NAMIAAFSFHALHAQTIHSVA-------------QMQQAGVTPNSSTLVSILPTIGQANA 225
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
A+H+ + F D+ V+ AL+ YA+C + ++++F+ + + V W++++
Sbjct: 226 LHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGG 285
Query: 292 YALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
Y LH +AL L+ +M + P AT ++L AC+ ++ G K+ M+++ G+
Sbjct: 286 YVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMD 344
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
++ + + G + A + EM + D+V +S ++ C ++G AE A
Sbjct: 345 LDTTVGNSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGCVQNG---YAEKALLI 400
Query: 408 LKQLE 412
+Q++
Sbjct: 401 FRQMQ 405
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 186/391 (47%), Gaps = 35/391 (8%)
Query: 23 QAMQL------HEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVV 74
QA+QL H H++ DL+V+ L++MYAK G+L A+ LF+ + R++V
Sbjct: 121 QALQLGRLIHTHAHILG----LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 75 SWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLIS---CDYLH-GKLVHALA 129
+W A+I+ ++ H + + Q PN +L S+L + + LH GK +HA
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY 236
Query: 130 LKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
++ +V + AL++MY+K A K+F + +N + W++MI + + A+
Sbjct: 237 IRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDAL 296
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
L+ M L G+ P T + +L+ACA L + +H + K G +
Sbjct: 297 ALYDDM------------LCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMD 344
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
DT + N+LI YA+CG + + D+M D VS+++I+ +G A++AL +F M
Sbjct: 345 LDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQM 404
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
+ P T ++LL ACSH +Q G H G ++D+ + G+
Sbjct: 405 QSSGIAPYLETMIALLPACSHLAALQHGT-CCHGYTVVRGFTNDTSICNAIIDMYSKCGK 463
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
I + ++ M D + W+ ++ HG
Sbjct: 464 ITISREIFDRM-QNRDIISWNTMIIGYGIHG 493
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D A L + I L++ VFD++ +V WN +++ YA G ++++ L+ +
Sbjct: 38 SDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLH 97
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M V P + TF LL ACS +Q G ++ H+ G+ L ++ + + G
Sbjct: 98 MLQLGVTPTNFTFPFLLKACSSLQALQLG-RLIHTHAHILGLSMDLYVSTALLHMYAKCG 156
Query: 365 RILEAEKLIREMP-MEPDSVIWSVLLGSCRKHG 396
+ +A+ L + + D V W+ ++ + H
Sbjct: 157 HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHA 189
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/595 (37%), Positives = 350/595 (58%), Gaps = 34/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y L +AC ++ ++H HMI P ++ L+ Y K L+DAR +
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPAT----YLRTRLLIFYGKCDCLEDARKVL 110
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHG-- 122
DEMP++NVVSWTA+IS Y+Q G++ E +F +++ PNEF+ A+VL SC G
Sbjct: 111 DEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLG 170
Query: 123 --KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
K +H L +K++ D+H++V ++L++MY+K+ EA ++FE + R+V+S ++IA +
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGY- 229
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A++ +EEAL +F +L EGM+P++ T++ +L A +GL H H
Sbjct: 230 ------------AQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + V+ N+LI Y++CG++S ++++FD M +SWN++L Y+ HG +
Sbjct: 278 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 300 EALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN-HGVVPQLDHYA 354
E L+LF M V+PD+ T +++LS CSH + G +F M+ +G P +HY
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYG 397
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VD+LGR GRI EA + I+ MP +P + + LLG+CR H + E +L ++EP
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE 457
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
++ +V +SN+Y +G + +R M V K PG SWI+ E +H F + + HP+
Sbjct: 458 NAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPR 517
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
RE + K++E+ ++K GYVP+ S L+D++EE KE+ L HSEKLAL F ++ G
Sbjct: 518 REEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATG--- 574
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E IR+ KN+RICVDCHNF K+ S + +E+ +RD NRFH D ICSC DYW
Sbjct: 575 -EGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/622 (37%), Positives = 361/622 (58%), Gaps = 57/622 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFG--------- 56
++ ++ +C L +++ +H +I DL+ N L+NMY+KF
Sbjct: 107 NVFPSVLKSCTLMKDLRFGESVHGCIIR--LGMGFDLYTCNALMNMYSKFWSLEEVNTYK 164
Query: 57 --------------------YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
YL R +F+ MPKR++VSW +ISG AQ+G E+ +
Sbjct: 165 KVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV 224
Query: 97 CSLLQY-FFPNEFSLASVL-ISCDY---LHGKLVHALALKFSLDAHVYVANALINMYSKS 151
+ P+ F+L+SVL I +Y L GK +H A++ DA V++ ++LI+MY+K
Sbjct: 225 REMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC 284
Query: 152 C-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D++ +VF + + ISWNS+IA C +F +E L F+Q+
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAG---CVQNG----MF------DEGLKFFQQMLIA 331
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ P+ +FS ++ ACA L T +H I + F+ + IA+AL+ YA+CG+I +
Sbjct: 332 KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTA 391
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+ +FDKM +D+VSW +++ YALHG A +A+ LF M V+P+ F+++L+ACSHA
Sbjct: 392 RWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHA 451
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV E K F+SM +++ ++P L+HYA + DLLGRVGR+ EA + I +M +EP +WS
Sbjct: 452 GLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWST 511
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +CR H LAE + KL ++P + +V +SNIY +G + AR +R M+ +
Sbjct: 512 LLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGM 571
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K P SWIEI+N+VH F +G K HP + I + L+ L+ Q++ GYV +T+ LHD+EE
Sbjct: 572 KKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEE 631
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E K L HSE+LA+ F I++ + + IR+ KN+R+CVDCH K S ++G+EI
Sbjct: 632 EQKRYLLCSHSERLAITFGIISTPA----GTTIRVTKNLRVCVDCHTATKFISKIVGREI 687
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
VVRD++RFHHFKD CSC D+W
Sbjct: 688 VVRDNSRFHHFKDGKCSCGDFW 709
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 178/413 (43%), Gaps = 57/413 (13%)
Query: 23 QAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR-NVVSWTALIS 81
QA QLH ++ P L + ++++Y+ L D+ +F+ +P ++W ++I
Sbjct: 23 QAKQLHAQILRTSLPSPSLL---STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIR 79
Query: 82 GYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISC----DYLHGKLVHALALKFSLDA 136
Y HG F +L +P+ SVL SC D G+ VH ++ +
Sbjct: 80 CYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGF 139
Query: 137 HVYVANALINMYS-----------KSCADEA-------------------WKVFENMEFR 166
+Y NAL+NMYS K DE KVFE M R
Sbjct: 140 DLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKR 199
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+++SWN++I+ A+ E+AL + R++ + PD T S VL
Sbjct: 200 DIVSWNTVISG-------------NAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIF 246
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
A V +H + G++ D I ++LI YA+C + S +VF + HD +SWN
Sbjct: 247 AEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWN 306
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
SI+ +G E L+ F M ++P+ +F S++ AC+H + G K H +
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLG-KQLHGYIIR 365
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + +VD+ + G I A + +M + D V W+ ++ HG
Sbjct: 366 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSWTAMIMGYALHG 417
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/626 (37%), Positives = 356/626 (56%), Gaps = 58/626 (9%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHM-----------INN-----------------F 35
S +Y+TL +C ++Q ++H+H+ +N F
Sbjct: 69 SASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLF 128
Query: 36 PNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
P+ DL N LI+ YAK G L +A+ LFD+MP+R+ SWTA+ISGY +H E
Sbjct: 129 DEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALE 188
Query: 95 LFCSLLQY--FFPNEFSLASVL-----ISCDYLHGKLVHALALKFSLDAHVYVANALINM 147
LF + + N+F+++S L + C + GK +H ++ LD+ V +AL +M
Sbjct: 189 LFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRI-GKEIHGYIMRTGLDSDEVVWSALSDM 247
Query: 148 YSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
Y K +EA +F+ M R++++W +MI + + + +E LF
Sbjct: 248 YGKCGSIEEARHIFDKMVDRDIVTWTAMI-------------DRYFQDGRRKEGFDLFAD 294
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
L R G+ P+ TFS VL ACA +E VH + + GF+ + A+AL+H Y++CG+
Sbjct: 295 LLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGN 354
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSA 323
+ +++VF + DL SW S++ YA +GQ EA++ F QPD TFV +LSA
Sbjct: 355 MVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSA 414
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C+HAGLV +G FHS+ E +G+ DHYAC++DLL R G+ EAE +I +M M+PD
Sbjct: 415 CAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKF 474
Query: 384 IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+W+ LLG CR HG +LA+ AA L ++EP + +V ++NIY +G +++ IRK M
Sbjct: 475 LWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMD 534
Query: 444 GSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH 503
V K PGLSWI I+ VH F G HP+ + I + L +L ++K G+VP+T+ LH
Sbjct: 535 DRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLH 594
Query: 504 DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
D+E+E KE+ L +HSEKLA+ F I++ E + I++ KN+R CVDCH +K S +
Sbjct: 595 DVEDEQKEQNLSYHSEKLAVAFGIIS----TPEGTPIKVFKNLRTCVDCHTAIKFISKIT 650
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
++I+VRDSNRFH F+D CSC DYW
Sbjct: 651 NRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 41/359 (11%)
Query: 77 TALISGYAQHGNAEECFRLFCS----------LLQYFFPNEFSLASVLISCD----YLHG 122
T L+ H +E + C L Q P+ ++++ SC G
Sbjct: 30 TTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQG 89
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K VH +++ N L+ MY+K C ++ K+F+ M R++ SWN +I+ +
Sbjct: 90 KKVHQHIKLSGFVPGLFILNRLLEMYAK-CDSLMDSQKLFDEMPERDLCSWNILISGYAK 148
Query: 181 CKLEAQAIELFAKMKNEE------------------EALFLFRQLQR-EGMAPDWCTFSI 221
L +A LF KM + EAL LFR ++R + + T S
Sbjct: 149 MGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSS 208
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
L A A + R +H I + G + D V+ +AL Y +CGSI ++ +FDKM D
Sbjct: 209 ALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRD 268
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+V+W +++ Y G+ KE LF+++ ++P+ TF +L+AC++ + G KV H
Sbjct: 269 IVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKV-H 327
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ G P + +V + + G ++ AE++ +E P +PD W+ L+ ++G+
Sbjct: 328 GYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLIAGYAQNGQ 385
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+AI + + +EAL + Q+ + P +S ++++C + VH I
Sbjct: 44 EAIHILCQQNRLKEALQILHQIDK----PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLS 99
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
GF I N L+ YA+C S+ S+++FD+M DL SWN ++ YA G +EA LF
Sbjct: 100 GFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLF 159
Query: 306 SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE------NHGVVPQLDHYACMVDL 359
M + D+ ++ +++S E ++F M N V A V
Sbjct: 160 DKMP-ERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPC 218
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVL---LGSCRKHGETR 399
L R+G+ E I ++ D V+WS L G C E R
Sbjct: 219 L-RIGK--EIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEAR 258
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/593 (37%), Positives = 345/593 (58%), Gaps = 30/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC N++ + E + + DLFV LI MYA+ ++A +F
Sbjct: 114 FLSILDACVNPENLQHGKHVRESISET--SFELDLFVGTALITMYARCRSPENAAQVFGR 171
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHG---- 122
M ++N+++W+A+I+ +A HG+ E R F + Q PN + S+L G
Sbjct: 172 MKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL 231
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFR 179
+H L + LD ++NAL+N+Y + E A + + M+ + + +WN +I +
Sbjct: 232 SRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGY- 290
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L + + EAL +++LQ E + D TF VL AC + +H
Sbjct: 291 ---------TLHGRSR---EALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIH 338
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S + G + D ++ NAL + Y++CGS+ ++++FD M VSWN +L+AYA HG+++
Sbjct: 339 SNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESE 398
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
E L+L M V+ + TFVS+LS+CSHAGL+ EG + FHS+ + G+ + +HY C+
Sbjct: 399 EVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCL 458
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G++ EAEK I +MP EP+ V W+ LLG+CR H + +LAA KL +L+PG+S
Sbjct: 459 VDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNS 518
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V +SNIY G + A +R+ M RV+K PG+S I+++N+VHEF HP+
Sbjct: 519 SASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAA 578
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ K+EEL ++ GYVP+T + LHD++EE KE L +HSEKLA+ F +++ E
Sbjct: 579 EIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTP----E 634
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+S + I KN+R+C DCH K S + G+EIVVRD++RFHHF+D CSC DYW
Sbjct: 635 KSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 198/370 (53%), Gaps = 28/370 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV L+N Y K G L DAR +FD MP R+V +W ++IS Y+ + E F +F +
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIF-QRM 102
Query: 101 QYFFP--NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
Q+ + + S+L +C + HGK V + S + ++V ALI MY++ +
Sbjct: 103 QHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSP 162
Query: 155 E-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
E A +VF M+ +N+I+W+++I A FA + EAL FR +Q+EG+
Sbjct: 163 ENAAQVFGRMKQKNLITWSAIITA-------------FADHGHCGEALRYFRMMQQEGIL 209
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC--GSISLSK 271
P+ TF +L S +H LI ++G +D T ++NAL++ Y RC G + +++
Sbjct: 210 PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAE 269
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAG 328
+ +M + +WN ++ Y LHG+++EAL+ + + ++ D TF+S+L+AC+ +
Sbjct: 270 VILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSST 329
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+ EG K+ HS G+ + + ++ + G + A ++ MP+ +V W+ +
Sbjct: 330 SLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGM 387
Query: 389 LGSCRKHGET 398
L + +HGE+
Sbjct: 388 LQAYAQHGES 397
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 166/325 (51%), Gaps = 24/325 (7%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
GK +H+ + V+V AL+N Y+K + +A KVF+ M R+V +WNSMI+A+
Sbjct: 29 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 88
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ EA F+F+++Q EG D TF +L AC +H V
Sbjct: 89 SERSG-------------EAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRE 135
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I++ FE D + ALI YARC S + QVF +M +L++W++I+ A+A HG E
Sbjct: 136 SISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGE 195
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+ F M + P+ TF+SLL+ + ++E +++ H ++ HG+ +V
Sbjct: 196 ALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI-HLLITEHGLDDTTTMSNALV 254
Query: 358 DLLGR--VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE--P 413
++ GR G + AE +++EM E W+VL+ HG +R A L + QLE P
Sbjct: 255 NVYGRCETGELDVAEVILQEMD-EQQITAWNVLINGYTLHGRSREA-LETYQRLQLEAIP 312
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLI 438
D + F+ + N S S + ++I
Sbjct: 313 VDKVTFISVLNACTSSTSLAEGKMI 337
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
EG+ + TF VL + R +HS + + D + AL++ Y +CGS++
Sbjct: 4 EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 63
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSH 326
+++VFD M + +WNS++ AY++ ++ EA +F M + D TF+S+L AC +
Sbjct: 64 ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVN 123
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+Q G V S+ E +LD + ++ + R A ++ M + + +
Sbjct: 124 PENLQHGKHVRESISETSF---ELDLFVGTALITMYARCRSPENAAQVFGRMK-QKNLIT 179
Query: 385 WSVLLGSCRKHG 396
WS ++ + HG
Sbjct: 180 WSAIITAFADHG 191
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/560 (40%), Positives = 340/560 (60%), Gaps = 30/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL +N LINMY+K G +D AR +FDEMP R++VSW +I Q+G E L +
Sbjct: 98 DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157
Query: 101 QYFFP-NEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ P +EF+++SVL +C +L+HA A+K ++D +V+VA AL+++Y+K
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGM 212
+A VFE+M R+V++W+SM A + ++NE E+AL LFR+ G+
Sbjct: 218 DAVCVFESMPDRSVVTWSSMAAGY---------------VQNEMYEQALALFRKAWETGL 262
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D S V+ ACAGL V++L++K GF + +A++LI YA+CG I S +
Sbjct: 263 KHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYK 322
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGL 329
VF + ++V WN+++ + H ++ E + LF M + P+ TFVS+LSAC H GL
Sbjct: 323 VFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGL 382
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V++G K F M + H + P + HY+CMVD L R G+I EA LI ++P + +W LL
Sbjct: 383 VKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLL 442
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
SCR HG LAE+AA KL +EP +S ++ +SN+Y +G +++ +RK +K S V+K
Sbjct: 443 ASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKK 502
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWIEI+++VH F G + HP+ I+ KL E++ +L+ +GY ET LH + E
Sbjct: 503 ERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESI 562
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K+E L HHSEKLA ++ + IRIMKN+RIC DCH+FMKLAS ++++V
Sbjct: 563 KQELLRHHSEKLAFTMGLL----FLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIV 618
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFK+ CSC D+W
Sbjct: 619 RDTNRFHHFKNGCCSCGDFW 638
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 21/302 (6%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
L GK HA L L + +N LINMYSK D A +VF+ M R+++SWN+MI +
Sbjct: 81 LQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGS- 139
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ E EAL L Q+QREG T S VL ACA +
Sbjct: 140 ------------LTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLL 187
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K + + +A AL+ YA+CG + + VF+ M +V+W+S+ Y +
Sbjct: 188 HAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY 247
Query: 299 KEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++AL LF ++ D S++ AC+ + EG +V +++L G + +
Sbjct: 248 EQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQV-NALLSKSGFCSNIFVASS 306
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEP 413
++D+ + G I E+ K+ R++ + + V+W+ ++ +H + + K++Q L P
Sbjct: 307 LIDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSP 365
Query: 414 GD 415
D
Sbjct: 366 ND 367
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
+LK CA A H+ I G + D + +N LI+ Y++CGS+ ++QVFD+M
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMNVQ--PDSA-TFVSLLSACSHAGLVQEGNKVFH 338
LVSWN+++ + +G+ EAL L M + P S T S+L AC+ + E ++ H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC-QLLH 188
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+ + + ++D+ + G + +A + MP + V WS +
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/556 (41%), Positives = 330/556 (59%), Gaps = 32/556 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPN 106
LI Y G++DDAR LFDE+P ++VVSW A+I+GY Q G EE F + + PN
Sbjct: 199 LITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPN 258
Query: 107 EFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVF 160
+ ++ SVL +C +L GK + + ++ + NAL++MYSK C + A K+F
Sbjct: 259 QSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSK-CGEIGTARKLF 317
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+ ME ++VI WN+MI + C L EEAL LF + RE + P+ TF
Sbjct: 318 DGMEDKDVILWNTMIGGY--CHLSLY-----------EEALVLFEVMLRENVTPNDVTFL 364
Query: 221 IVLKACAGLVTERHASAVHSLIAK----YGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
VL ACA L VH+ I K G ++ + ++I YA+CG + +++QVF
Sbjct: 365 AVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRS 424
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M L SWN+++ A++G A+ AL LF M QPD TFV +LSAC+ AG V+ G
Sbjct: 425 MGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELG 484
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
++ F SM +++G+ P+L HY CM+DLL R G+ EA+ L+ M MEPD IW LL +CR
Sbjct: 485 HRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACR 544
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
HG+ E A +L +LEP +S +V +SNIY +G ++ IR ++ ++K PG
Sbjct: 545 IHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGC 604
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
+ IEI+ VHEF G K HPQ E IF+ L+E+ L+ G+VP+TS L+D++EE KE
Sbjct: 605 TSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGA 664
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F +++ + S IRI+KN+R+C +CH+ KL S + +EI+ RD N
Sbjct: 665 LTQHSEKLAIAFGLIST----KPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRN 720
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFKD CSCND W
Sbjct: 721 RFHHFKDGFCSCNDRW 736
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 163/381 (42%), Gaps = 85/381 (22%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
+P ++F+ N LI ++ + HLF +M L SG
Sbjct: 88 QPPNIFIWNTLIRAHSLTPTPTSSLHLFSQM----------LHSG--------------- 122
Query: 98 SLLQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK--- 150
+PN + S+ SC K +HA ALK +L H +V +LI+MYS+
Sbjct: 123 -----LYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGE 177
Query: 151 -----------------------------SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
D+A ++F+ + ++V+SWN+MIA
Sbjct: 178 LRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAG---- 233
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ + EEAL F ++Q ++P+ T VL AC L + + S
Sbjct: 234 ---------YVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSW 284
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ GF + + NAL+ Y++CG I ++++FD M D++ WN+++ Y +EA
Sbjct: 285 VRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEA 344
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV---FHSMLENHGVVPQLDHYAC 355
L LF M NV P+ TF+++L AC+ G + G V L+ G V + +
Sbjct: 345 LVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTS 404
Query: 356 MVDLLGRVGRILEAEKLIREM 376
++ + + G + AE++ R M
Sbjct: 405 IIVMYAKCGCVEVAEQVFRSM 425
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 54/308 (17%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFR--NVISWNSMIAA 177
K +H+L +K L ++ + LI + S + + A +F ++ + N+ WN++I A
Sbjct: 42 KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ +L LF Q+ G+ P+ TF + K+CA A
Sbjct: 102 H-------------SLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH----------------- 280
+H+ K + +LIH Y++ G + ++ VFDK T
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208
Query: 281 --------------DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
D+VSWN+++ Y G+ +EAL F+ M +V P+ +T VS+LSA
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C H ++ G K S + + G L +VD+ + G I A KL M + D +
Sbjct: 269 CGHLRSLELG-KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGME-DKDVI 326
Query: 384 IWSVLLGS 391
+W+ ++G
Sbjct: 327 LWNTMIGG 334
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 339/581 (58%), Gaps = 35/581 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+++ N LI++Y + G + A F++MP R++VSW ++ISGY+Q G E +F +
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKM 265
Query: 100 LQ--YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L P+ F+LAS+L +C L GK +HA L+ + V NALI+MY+KS
Sbjct: 266 LNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGG 325
Query: 154 DEAWKVF---ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------ 198
E ++ N+I++ S++ + A E+F K+++ +
Sbjct: 326 VEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYV 385
Query: 199 ------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+AL LFR + EG P+ T + +L + L H +H+ K G
Sbjct: 386 QNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 253 IANALIHAYARCGSISLSKQVFD-KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ NALI YA+ G+I+++K+VFD ++VSW S++ A A HG KEA+ LF M
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
++PD T+V +LSAC+H GLV++G K ++ M E H + P L HYACM+DL GR G + E
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A I MP+EPD++ W LL SC+ H LA++AA +L ++PG+S ++ ++N+Y
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
G + A RK MK VRK G+SWI I+N VH F HPQ++ I+K + E+ +
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEE 685
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
+K MG++P+T LHD+EEE KE+ L +HSEKLA+ F ++N E + +RIMKN+R+
Sbjct: 686 IKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLN----TPENTALRIMKNLRV 741
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH+ +K S L+G+EI+VRD+ RFHHFKD CSC DYW
Sbjct: 742 CNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 202/436 (46%), Gaps = 68/436 (15%)
Query: 24 AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
+++ H+ + P + F N LI+ YAK G + +R L EMP + VSWTA+I GY
Sbjct: 60 SLRFAHHVFDEMP--LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117
Query: 84 AQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHV 138
Q G + +F ++ + P++F++++VL SC G+ +H+ +K L + V
Sbjct: 118 NQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 139 YVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
VA +L+NMY+K C D A VF+ M +N+ +WN++I+ + A F KM +
Sbjct: 178 PVATSLLNMYAK-CGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPD 236
Query: 197 EE------------------EALFLF-RQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ EAL +F + L + PD T + +L ACA L
Sbjct: 237 RDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ 296
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISL---------------------------- 269
+H+ I + E + NALI YA+ G + +
Sbjct: 297 IHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356
Query: 270 -----SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLL 321
++++F+K+ D+V+W +++ Y +G +AL+LF N +P+S T ++L
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416
Query: 322 SACSHAGLVQEGNKVFHSMLE-NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
S S +++ G ++ S ++ P + + ++ + + G I A+++ +
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKK 474
Query: 381 DSVIWSVLLGSCRKHG 396
+ V W+ ++ + +HG
Sbjct: 475 EIVSWTSMIMALAQHG 490
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 171/409 (41%), Gaps = 79/409 (19%)
Query: 87 GNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALIN 146
GN+ F +LQ SV I D G+ VH +K L VY+ N L+
Sbjct: 4 GNSPTSSEFFAHILQ---------TSVRIK-DPFAGRSVHCQIIKKGLHLGVYLMNNLMT 53
Query: 147 MYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN--------- 196
Y+K+ + A VF+ M ++ SWN++I+ + + L +M +
Sbjct: 54 FYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAI 113
Query: 197 ---------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+ A+++F ++ E + P T S VL +CA T +HS + K G
Sbjct: 114 IVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGL 173
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTY---------------------------- 279
+A +L++ YA+CG ++K VFD+MT
Sbjct: 174 GSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEK 233
Query: 280 ---HDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQE 332
D+VSWNS++ Y+ G EAL +FS M +++PD+ T S+LSAC++ +
Sbjct: 234 MPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNI 293
Query: 333 GNKVFHSML----ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE--MPMEPDSVIWS 386
G ++ +L E G V ++ + + G + E +LI E + + ++
Sbjct: 294 GKQIHAYILRAETETSGAVGN-----ALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFT 347
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
LL K G + A KL+ D + + M Y +G +N A
Sbjct: 348 SLLDGYTKLGNVKPAREIFNKLRDR---DVVAWTAMIVGYVQNGLWNDA 393
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTA 78
++ Q+H I E VTN LI MYAK G ++ A+ +FD +P K+ +VSWT+
Sbjct: 425 LEHGKQIHASAIK--AGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTS 481
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVHALALKFSLDAH 137
+I AQHG +E LF +L P+ + VL +C H LV +++
Sbjct: 482 MIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACT--HVGLVEQGRKYYNMMTE 539
Query: 138 VYVANA-------LINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFRACKLEAQA 187
V+ +I++Y ++ EA+ E+M + I+W S++A +CK+ A
Sbjct: 540 VHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA---SCKIHKNA 595
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/605 (39%), Positives = 345/605 (57%), Gaps = 38/605 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A +G I+ A +L + ++ ++ N L+ Y + LDDAR LFD
Sbjct: 187 WNGLLSAYVQNGRIEDARRLFDSKMD------WEIVSWNCLMGGYVRKKRLDDARSLFDR 240
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVH 126
MP R+ +SW +I+GYAQ+G E RLF L P A + ++S +G L
Sbjct: 241 MPVRDKISWNIMITGYAQNGLLSEARRLFEEL-----PIRDVFAWTAMVSGFVQNGMLDE 295
Query: 127 ALALKFSLDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A + + V+ NA+I Y +S ++A ++F+ M RN SWN+M+ + C
Sbjct: 296 ATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNI 355
Query: 185 AQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKAC 226
QA LF +M EEAL LF +++R+G + + L +C
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
A + +H + K GF+ + NAL+ Y +CGSI + VF+ +T D+VSWN
Sbjct: 416 AEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWN 475
Query: 287 SILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
+++ YA HG KEAL LF +M ++PD T V +LSACSH GLV +G + F+SM +N+
Sbjct: 476 TMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNY 535
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
G+ HY CM+DLLGR GR+ EA L++ MP PD+ W LLG+ R HG+T L E A
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKA 595
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
A K+ ++EP +S +V +SN+Y SG + + R +R +M+ V+K PG SW+EI+N+ H
Sbjct: 596 AEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHI 655
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F G HP+ E I+ LEEL +LK G+V T L LHD+EEE KE L +HSEKLA+
Sbjct: 656 FTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 715
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
F I+ S+ R IR++KN+R+C DCHN +K S + ++I+VRDSNRFHHF + CS
Sbjct: 716 FGIL---SIPPGRP-IRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCS 771
Query: 585 CNDYW 589
C DYW
Sbjct: 772 CGDYW 776
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 189/417 (45%), Gaps = 43/417 (10%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
ST Y + + A ++ E M P+ +DL N +++ Y K G L AR
Sbjct: 89 RSTVTYNAMISGYLSNNKFDCARKVFEKM----PD--RDLISWNVMLSGYVKNGNLSAAR 142
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG 122
LF++MP+++VVSW A++SG+AQ+G EE ++F +L NE S L+S +G
Sbjct: 143 ALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML---VKNEISWNG-LLSAYVQNG 198
Query: 123 KLVHALALKFS-LDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRA 180
++ A L S +D + N L+ Y K D+A +F+ M R+ ISWN MI +
Sbjct: 199 RIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQ 258
Query: 181 CKLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIV 222
L ++A LF ++ +EA +F ++ E W
Sbjct: 259 NGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAM--- 314
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
AG V + L + +T N ++ YA+CG+I +K +FD+M D
Sbjct: 315 ---IAGYVQSQQIEKARELFDQMP-SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 283 VSWNSILKAYALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHS 339
+SW +++ YA GQ++EAL LF M + + LS+C+ ++ G K H
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELG-KQLHG 429
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
L G ++ + G+ G I EA + ++ E D V W+ ++ +HG
Sbjct: 430 RLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARHG 485
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 154/376 (40%), Gaps = 74/376 (19%)
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALK 131
++V W IS Y + G E +F + +
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRR------------------------------ 88
Query: 132 FSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
NA+I+ Y S + D A KVFE M R++ISWN M++
Sbjct: 89 ----RSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSG------------- 131
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFE 248
+ K N A LF Q+ + D +++ +L A G V E L+
Sbjct: 132 YVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----- 182
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
+ + N L+ AY + G I ++++FD ++VSWN ++ Y + +A LF M
Sbjct: 183 -NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM 241
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRI 366
V+ D ++ +++ + GL+ E ++F + P D +A MV + G +
Sbjct: 242 PVR-DKISWNIMITGYAQNGLLSEARRLFEEL-------PIRDVFAWTAMVSGFVQNGML 293
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
EA ++ EMP E + V W+ ++ + +++ E A Q+ ++ + M Y
Sbjct: 294 DEATRIFEEMP-EKNEVSWNAMIAG---YVQSQQIEKARELFDQMPSRNTSSWNTMVTGY 349
Query: 427 CLSGSFNKARLIRKEM 442
G+ ++A+++ EM
Sbjct: 350 AQCGNIDQAKILFDEM 365
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 347/641 (54%), Gaps = 65/641 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L AC ++ +A ++H+H + N N D V + L +Y + AR LFDE
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSN--ADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HG 122
+P +V+ W +I YA +G + L+ S+L PN+++ VL +C L G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H+ A F L++ V+V AL++ Y+K EA ++F +M R+V++WN+MIA
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 182 KLEAQAIELFAKMKNE-------------------------------------------- 197
L A++L +M+ E
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGY 248
Query: 198 ------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+EAL +FR +Q G+ PD T VL AC+ L +H H + GF DT
Sbjct: 249 VASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDT 308
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+I NALI Y++CG IS +++VF++M HD+VSWN+++ Y +HG EAL LF ++
Sbjct: 309 LICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL 368
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
++PD TF+ LLS+CSH+GLV EG F +M + +VP+++H CMVD+LGR G I E
Sbjct: 369 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 428
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A IR MP EPD IWS LL +CR H L E + K++ L P + FV +SNIY
Sbjct: 429 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSA 488
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
+G ++ A IR K ++K PG SWIEI VH F G + H Q I +KLEEL+ +
Sbjct: 489 AGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVE 548
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
+K +GY E S D+EEE KE+ L +HSEKLA+ F I+N + I + KN+R+
Sbjct: 549 MKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNL----KAGRPILVTKNLRV 604
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH +K + + +EI VRD+NRFHHFK+ C+C D+W
Sbjct: 605 CGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 339/581 (58%), Gaps = 35/581 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+++ N LI++Y + G + A F++MP R++VSW ++ISGY+Q G E +F +
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKM 265
Query: 100 LQ--YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L P+ F+LAS+L +C L GK +HA L+ + V NALI+MY+KS
Sbjct: 266 LNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGG 325
Query: 154 DEAWKVF---ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------ 198
E ++ N+I++ S++ + A E+F K+++ +
Sbjct: 326 VEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYV 385
Query: 199 ------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+AL LFR + EG P+ T + +L + L H +H+ K G
Sbjct: 386 QNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 253 IANALIHAYARCGSISLSKQVFD-KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ NALI YA+ G+I+++K+VFD ++VSW S++ A A HG KEA+ LF M
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
++PD T+V +LSAC+H GLV++G K ++ M E H + P L HYACM+DL GR G + E
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A I MP+EPD++ W LL SC+ H LA++AA +L ++PG+S ++ ++N+Y
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
G + A RK MK VRK G+SWI I+N VH F HPQ++ I+K + E+ +
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEE 685
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
+K MG++P+T LHD+EEE KE+ L +HSEKLA+ F ++N E + +RIMKN+R+
Sbjct: 686 IKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLN----TPENTALRIMKNLRV 741
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH+ +K S L+G+EI+VRD+ RFHHFKD CSC DYW
Sbjct: 742 CNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 202/436 (46%), Gaps = 68/436 (15%)
Query: 24 AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
+++ H+ + P + F N LI+ YAK G + +R L EMP + VSWTA+I GY
Sbjct: 60 SLRFAHHVFDEMP--LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117
Query: 84 AQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHV 138
Q G + +F ++ + P++F++++VL SC G+ +H+ +K L + V
Sbjct: 118 NQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 139 YVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
VA +L+NMY+K C D A VF+ M +N+ +WN++I+ + A F KM +
Sbjct: 178 PVATSLLNMYAK-CGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPD 236
Query: 197 EE------------------EALFLF-RQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ EAL +F + L + PD T + +L ACA L
Sbjct: 237 RDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ 296
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISL---------------------------- 269
+H+ I + E + NALI YA+ G + +
Sbjct: 297 IHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356
Query: 270 -----SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLL 321
++++F+K+ D+V+W +++ Y +G +AL+LF N +P+S T ++L
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416
Query: 322 SACSHAGLVQEGNKVFHSMLE-NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
S S +++ G ++ S ++ P + + ++ + + G I A+++ +
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKK 474
Query: 381 DSVIWSVLLGSCRKHG 396
+ V W+ ++ + +HG
Sbjct: 475 EIVSWTSMIMALAQHG 490
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 171/409 (41%), Gaps = 79/409 (19%)
Query: 87 GNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALIN 146
GN+ F +LQ SV I D G+ VH +K L VY+ N L+
Sbjct: 4 GNSPTSSEFFAHILQ---------TSVRIK-DPFAGRSVHCQIIKKGLHLGVYLMNNLMT 53
Query: 147 MYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN--------- 196
Y+K+ + A VF+ M ++ SWN++I+ + + L +M +
Sbjct: 54 FYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAI 113
Query: 197 ---------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+ A+++F ++ E + P T S VL +CA T +HS + K G
Sbjct: 114 IVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGL 173
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTY---------------------------- 279
+A +L++ YA+CG ++K VFD+MT
Sbjct: 174 GSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEK 233
Query: 280 ---HDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQE 332
D+VSWNS++ Y+ G EAL +FS M +++PD+ T S+LSAC++ +
Sbjct: 234 MPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNI 293
Query: 333 GNKVFHSML----ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE--MPMEPDSVIWS 386
G ++ +L E G V ++ + + G + E +LI E + + ++
Sbjct: 294 GKQIHAYILRAETETSGAVGN-----ALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFT 347
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
LL K G + A KL+ D + + M Y +G +N A
Sbjct: 348 SLLDGYTKLGNVKPAREIFNKLRDR---DVVAWTAMIVGYVQNGLWNDA 393
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTA 78
++ Q+H I E VTN LI MYAK G ++ A+ +FD +P K+ +VSWT+
Sbjct: 425 LEHGKQIHASAIK--AGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTS 481
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVHALALKFSLDAH 137
+I AQHG +E LF +L P+ + VL +C H LV +++
Sbjct: 482 MIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACT--HVGLVEQGRKYYNMMTE 539
Query: 138 VYVANA-------LINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFRACKLEAQA 187
V+ +I++Y ++ EA+ E+M + I+W S++A +CK+ A
Sbjct: 540 VHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA---SCKIHKNA 595
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/592 (37%), Positives = 361/592 (60%), Gaps = 29/592 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ ACA G+I+ Q+H + +LFV ++L +MY+K G + DA +F+E
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKF--GIGSELFVGSNLEDMYSKCGAMFDACKVFEE 166
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
MP ++ VSWTA+I GY++ G EE F ++ + ++ L S L +C L G
Sbjct: 167 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFE-NMEFRNVISWNSMIAAFRA 180
+ VH+ +K ++ ++V NAL +MYSK+ + A VF + E RNV+S+ +I +
Sbjct: 227 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGY-- 284
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+E + IE + L +F +L+R+G+ P+ TFS ++KACA + +H+
Sbjct: 285 --VETEQIE---------KGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHA 333
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K F++D +++ L+ Y +CG + + Q FD++ ++WNS++ + HG K+
Sbjct: 334 QVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKD 393
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+++F M V+P++ TF+SLL+ CSHAGLV+EG F+SM + +GVVP +HY+C++
Sbjct: 394 AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 453
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR GR+ EA++ I MP EP++ W LG+CR HG+ + +LAA KL +LEP +S
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSG 513
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V +SNIY + R +R M+ V+K PG SW+++ + H F + HP++ A
Sbjct: 514 ALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSA 573
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++KL+ L+ Q+K GYVP T D+++ KE+ L+ HSE++A+ FA++ S+ +
Sbjct: 574 IYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALI---SMPIGK 630
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+I + KN+R+CVDCH+ +K S + G++I+VRD++RFHHF D CSC DYW
Sbjct: 631 PII-VKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 209/406 (51%), Gaps = 29/406 (7%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L T A + A +++ QLH +I F+TNHL+NMY+K G LD A
Sbjct: 2 LRDTNALAHVIQTYAKTKRLRRGKQLHALLI--CAGYTPCTFLTNHLVNMYSKCGELDHA 59
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL 120
LFD MP+RN+VSWTA+ISG +Q+ E R FC + + P +F+ +S + +C L
Sbjct: 60 LKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASL 119
Query: 121 H----GKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMI 175
GK +H LALKF + + ++V + L +MYSK A +A KVFE M ++ +SW +MI
Sbjct: 120 GSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMI 179
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
++K+ EEAL F+++ E + D L AC L +
Sbjct: 180 DG-------------YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD-KMTYHDLVSWNSILKAYAL 294
+VHS + K GFE D + NAL Y++ G + + VF ++VS+ ++ Y
Sbjct: 227 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVE 286
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE-NHGVVPQL 350
Q ++ L +F + ++P+ TF SL+ AC++ +++G ++ +++ N P +
Sbjct: 287 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 346
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ +VD+ G+ G + +A + E+ +P + W+ L+ +HG
Sbjct: 347 S--SILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLVSVFGQHG 389
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
R +H+L+ G+ T + N L++ Y++CG + + ++FD M +LVSW +++
Sbjct: 22 RRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81
Query: 293 ALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ + + EA++ F M + P F S + AC+ G ++ G K H + G+ +
Sbjct: 82 SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG-KQMHCLALKFGIGSE 140
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
L + + D+ + G + +A K+ EMP + D V W+ ++ K GE A LA K+
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSKIGEFEEALLAFKKM 198
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/592 (37%), Positives = 361/592 (60%), Gaps = 29/592 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ ACA G+I+ Q+H + +LFV ++L +MY+K G + DA +F+E
Sbjct: 44 FSSAIRACASLGSIEMGKQMHCLALKF--GIGSELFVGSNLEDMYSKCGAMFDACKVFEE 101
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
MP ++ VSWTA+I GY++ G EE F ++ + ++ L S L +C L G
Sbjct: 102 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 161
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFE-NMEFRNVISWNSMIAAFRA 180
+ VH+ +K ++ ++V NAL +MYSK+ E A VF + E RNV+S+ +I +
Sbjct: 162 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGY-- 219
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+E + IE + L +F +L+R+G+ P+ TFS ++KACA + +H+
Sbjct: 220 --VETEQIE---------KGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHA 268
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K F++D +++ L+ Y +CG + + Q FD++ ++WNS++ + HG K+
Sbjct: 269 QVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKD 328
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+++F M V+P++ TF+SLL+ CSHAGLV+EG F+SM + +GVVP +HY+C++
Sbjct: 329 AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 388
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR GR+ EA++ I MP EP++ W LG+CR HG+ + +LAA KL +LEP +S
Sbjct: 389 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSG 448
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V +SNIY + R +R M+ V+K PG SW+++ + H F + HP++ A
Sbjct: 449 ALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSA 508
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++KL+ L+ Q+K GYVP T D+++ KE+ L+ HSE++A+ FA++ S+ +
Sbjct: 509 IYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALI---SMPIGK 565
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+I + KN+R+CVDCH+ +K S + G++I+VRD++RFHHF D CSC DYW
Sbjct: 566 PII-VKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 177/340 (52%), Gaps = 27/340 (7%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----G 122
MP+RN+VSWTA+ISG +Q+ E R FC + + P +F+ +S + +C L G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRAC 181
K +H LALKF + + ++V + L +MYSK A +A KVFE M ++ +SW +MI
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG---- 116
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++K+ EEAL F+++ E + D L AC L + +VHS
Sbjct: 117 ---------YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSS 167
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFD-KMTYHDLVSWNSILKAYALHGQAKE 300
+ K GFE D + NAL Y++ G + + VF ++VS+ ++ Y Q ++
Sbjct: 168 VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK 227
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE-NHGVVPQLDHYACM 356
L +F + ++P+ TF SL+ AC++ +++G ++ +++ N P + + +
Sbjct: 228 GLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SIL 285
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
VD+ G+ G + +A + E+ +P + W+ L+ +HG
Sbjct: 286 VDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLVSVFGQHG 324
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/679 (35%), Positives = 372/679 (54%), Gaps = 97/679 (14%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+++ Y L C ++ QA +L HM + +P D F+ N L+++YAK G L DAR
Sbjct: 21 NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHL-YQPTDTFLQNRLLHLYAKSGNLSDARD 79
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLF----------------------CS--L 99
LFD+M +R+V SW A++S Y++ GN E+ +F CS
Sbjct: 80 LFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQA 139
Query: 100 LQYFF--------PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINM 147
L++F +++ SVL +C D GK +H + SL V+V NAL NM
Sbjct: 140 LEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNM 199
Query: 148 YSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN---------- 196
Y+K A D+A +F+ M +NV+SWNSMI+ + +LF +M++
Sbjct: 200 YAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTI 259
Query: 197 -------------------------------------------EEEALFLFRQLQREGMA 213
EE+AL LFR++ E +
Sbjct: 260 SNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVR 319
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T S V+ +CA L + AVH +G + D ++++AL+ Y++CG + + V
Sbjct: 320 PDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIV 379
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F +M +++SWNS++ YA +G+ EAL L+ M N++PD+ TFV +LSAC HAGLV
Sbjct: 380 FKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLV 439
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ G F+S+ + HG+ P DHY+CM++LLGR G + +A LI+ M EP+ +IWS LL
Sbjct: 440 ERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
CR + + E+AA L +L+P ++ ++ +SNIY G + +R MK ++++K+
Sbjct: 500 VCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKF 559
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
SWIEI+N+VH+F + + H + E I+++L LI +L+ G+ P+T+L LHD+ EE K
Sbjct: 560 AAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEK 619
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
+ + +HSEKLAL F ++ + R+ IRIMKNIR+C DCH FMK S ++ + I++R
Sbjct: 620 FDSICYHSEKLALAFWLIKKP---HGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILR 676
Query: 571 DSNRFHHFKDRICSCNDYW 589
D NRFHHF + CSC D W
Sbjct: 677 DINRFHHFIEGRCSCKDSW 695
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/560 (40%), Positives = 340/560 (60%), Gaps = 30/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL +N LINMY+K G +D AR +FDEMP R++VSW +I Q+G E L +
Sbjct: 98 DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157
Query: 101 QYFFP-NEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ P +EF+++SVL +C +L+HA A+K ++D +V+VA AL+++Y+K
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGM 212
+A VFE+M R+V++W+SM A + ++NE E+AL LFR+ G+
Sbjct: 218 DAVCVFESMPDRSVVTWSSMAAGY---------------VQNEMYEQALALFRKAWETGL 262
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D S V+ ACAGL +++L++K GF + +A++LI YA+CG I S +
Sbjct: 263 KHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYK 322
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGL 329
VF + ++V WN+++ + H ++ E + LF M + P+ TFVS+LSAC H GL
Sbjct: 323 VFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGL 382
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V++G K F M + H + P + HY+CMVD L R G+I EA LI ++P + +W LL
Sbjct: 383 VRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLL 442
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
SCR HG LAE+AA KL +EP +S ++ +SN+Y +G +++ +RK +K S V+K
Sbjct: 443 ASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKK 502
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWIEI+++VH F G + HP+ I+ KL E++ +L+ +GY ET LH + E
Sbjct: 503 ERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESI 562
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K+E L HHSEKLA ++ + IRIMKN+RIC DCH+FMKLAS ++++V
Sbjct: 563 KQELLRHHSEKLAFTMGLL----FLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIV 618
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFK+ CSC D+W
Sbjct: 619 RDTNRFHHFKNGCCSCGDFW 638
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 21/302 (6%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
L GK HA L L + +N LINMYSK D A +VF+ M R+++SWN+MI +
Sbjct: 81 LQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGS- 139
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ E EAL L Q+QREG T S VL ACA +
Sbjct: 140 ------------LTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLL 187
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K + + +A AL+ YA+CG + + VF+ M +V+W+S+ Y +
Sbjct: 188 HAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY 247
Query: 299 KEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++AL LF ++ D S++ AC+ + EG K +++L G + +
Sbjct: 248 EQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG-KQMNALLSKSGFCSNIFVASS 306
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEP 413
++D+ + G I E+ K+ R++ + + V+W+ ++ +H + + K++Q L P
Sbjct: 307 LIDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSP 365
Query: 414 GD 415
D
Sbjct: 366 ND 367
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
+LK CA A H+ I G + D + +N LI+ Y++CGS+ ++QVFD+M
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMNVQ--PDSA-TFVSLLSACSHAGLVQEGNKVFH 338
LVSWN+++ + +G+ EAL L M + P S T S+L AC+ + E ++ H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC-QLLH 188
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+ + + ++D+ + G + +A + MP + V WS +
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/590 (38%), Positives = 342/590 (57%), Gaps = 28/590 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G + QLH +I + DLF L++MY+K +DDAR +D M
Sbjct: 288 SSALKACAAMGFKELGRQLHSSLIK--MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSM 345
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG----K 123
PK+++++W ALISGY+Q G+ + LF + N+ +L++VL S L K
Sbjct: 346 PKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCK 405
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H +++K + + YV N+L++ Y K + DEA K+FE + +++++ SMI A+
Sbjct: 406 QIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAY---- 461
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
++ + EEAL L+ Q+Q + PD S +L ACA L +H
Sbjct: 462 ---------SQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHA 512
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K+GF D +N+L++ YA+CGSI + + F ++ +VSW++++ YA HG KEAL
Sbjct: 513 IKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEAL 572
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF+ M V P+ T VS+L AC+HAGLV EG + F M G+ P +HYACM+DL
Sbjct: 573 RLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDL 632
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G++ EA +L+ +P E D +W LLG+ R H L + AA L LEP S
Sbjct: 633 LGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTH 692
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V ++NIY +G + +RK MK S+V+K PG+SWIEI+++V+ F G + H + + I+
Sbjct: 693 VLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIY 752
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
KL++L L GY + +H++++ KE+ LYHHSEKLA+ F ++
Sbjct: 753 AKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIAT----PPGGP 808
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+RICVDCH F K ++ +EI+VRD NRFHHFKD CSC DYW
Sbjct: 809 IRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 198/386 (51%), Gaps = 34/386 (8%)
Query: 25 MQLHEHMIN-NFPNEPQDLFVTNHLINMYAK---FGYLDDARHLFDEMPKRNVVSWTALI 80
M+LH H+I F +P + NHL+ +Y+K FGY AR L DE + +VVSW++L+
Sbjct: 1 MELHAHLIKFGFSRDPS---LRNHLVTLYSKCRRFGY---ARKLVDESSELDVVSWSSLL 54
Query: 81 SGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLD 135
SGY Q+G EE +F + L NEF+ SVL +C D G+ VH +A+ +
Sbjct: 55 SGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFE 114
Query: 136 AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
+ +VAN L+ MY+K D++ ++F + RNV+SWN++ + + +L
Sbjct: 115 SDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCG--------- 165
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
EA+ LF+++ R G+ P+ + SI+L ACAGL +H L+ K G + D A
Sbjct: 166 ----EAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSA 221
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
NAL+ Y++ G I + VF + + D+VSWN+I+ LH AL L M +
Sbjct: 222 NALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTR 281
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P+ T S L AC+ G + G ++ HS L L +VD+ + + +A +
Sbjct: 282 PNMFTLSSALKACAAMGFKELGRQL-HSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARR 340
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGE 397
MP + D + W+ L+ + G+
Sbjct: 341 AYDSMP-KKDIIAWNALISGYSQCGD 365
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 204/400 (51%), Gaps = 28/400 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEH-MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++ AC++ ++ ++H ++ F + D FV N L+ MYAK G LDD+R LF
Sbjct: 85 FPSVLKACSMKRDLNMGRKVHGMAVVTGFES---DGFVANTLVVMYAKCGLLDDSRRLFG 141
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH---- 121
+ +RNVVSW AL S Y Q E LF +++ PNEFS++ +L +C L
Sbjct: 142 GIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDL 201
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRA 180
G+ +H L LK LD + ANAL++MYSK+ E A VF+++ +V+SWN++IA
Sbjct: 202 GRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAG--- 258
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
C L + AL L +++ G P+ T S LKACA + + +HS
Sbjct: 259 CVLH----------DCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHS 308
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K D A L+ Y++C + +++ +D M D+++WN+++ Y+ G +
Sbjct: 309 SLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLD 368
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ LFS M ++ + T ++L + + ++ ++ H++ G+ ++
Sbjct: 369 AVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQI-HTISIKSGIYSDFYVINSLL 427
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
D G+ I EA K+ E E D V ++ ++ + ++G+
Sbjct: 428 DTYGKCNHIDEASKIFEERTWE-DLVAYTSMITAYSQYGD 466
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 29/294 (9%)
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA +KF + N L+ +YSK C A K+ + +V+SW+S+++ +
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSK-CRRFGYARKLVDESSELDVVSWSSLLSGY---- 57
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ EEAL +F ++ G+ + TF VLKAC+ VH +
Sbjct: 58 ---------VQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMA 108
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
GFE D +AN L+ YA+CG + S+++F + ++VSWN++ Y EA+
Sbjct: 109 VVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAV 168
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN--KVFHSMLENHGVVPQLDHYAC-- 355
LF M + P+ + +L+AC AGL QEG+ + H ++ G+ LD ++
Sbjct: 169 GLFKEMVRSGIMPNEFSISIILNAC--AGL-QEGDLGRKIHGLMLKMGL--DLDQFSANA 223
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
+VD+ + G I A + +++ PD V W+ ++ C H LA + ++K
Sbjct: 224 LVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIAGCVLHDCNDLALMLLDEMK 276
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
I ++L +ACA +Q QLH H I F D+F +N L+NMYAK G ++DA F
Sbjct: 488 ICSSLLNACANLSAYEQGKQLHVHAIKFGFMC---DIFASNSLVNMYAKCGSIEDADRAF 544
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKL 124
E+P R +VSW+A+I GYAQHG+ +E RLF +L+ PN +L SVL +C+ H L
Sbjct: 545 SEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACN--HAGL 602
Query: 125 VH 126
V+
Sbjct: 603 VN 604
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/556 (39%), Positives = 334/556 (60%), Gaps = 28/556 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V L++MYAK G ++DAR F+ + +V+ W+ +IS YAQ E+ F LF +++
Sbjct: 669 VYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSS 728
Query: 104 F-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EA 156
PNEFSL+SVL +C + GK +H A+K ++ ++V NALI++Y+K C+D +
Sbjct: 729 VSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAK-CSDMESS 787
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
++F ++ N +SWN++I + +K E AL +FR+++ +
Sbjct: 788 LEIFSSLRDVNEVSWNTIIVGY-------------SKSGFGEAALSVFREMRAASVPSTQ 834
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T+S VL+ACA + H VH LI K F DT+++N+LI +YA+CG I ++++F+
Sbjct: 835 VTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFET 894
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEG 333
+ DLVSWN+I+ YA+HGQA A +LF M+ ++ + TFV+LLS C GLV +G
Sbjct: 895 LKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQG 954
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+F SM +HG+ P ++HY C+V LLGR GR+ +A I ++P P +++W LL SC
Sbjct: 955 LSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCI 1014
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H L +A K+ ++EP D +V +SN+Y +GS ++ RK M+ VRK PGL
Sbjct: 1015 VHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGL 1074
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SW+EI+ VH F+ G + HP I LE L + GYVP+T LHD+EEE K
Sbjct: 1075 SWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRM 1134
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L+ HSE+LAL + ++ + IRIMKN+R C+DCH K+ S ++ +EI+VRD N
Sbjct: 1135 LWVHSERLALAYGLV----MTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDIN 1190
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF++ CSC DYW
Sbjct: 1191 RFHHFEEGTCSCGDYW 1206
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 168/338 (49%), Gaps = 22/338 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA L C G+ + +H H++ + DLF N L+NMY K G A +FD
Sbjct: 431 YARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDG 490
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVL---ISCDYLH-G 122
+P+RN+VS+ L+ G+A G EE LF L + N+F L +VL ++ D L
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VHA A K D + +V +ALI+ YS +A +VF+ + ++ ++W +M++ +
Sbjct: 551 WGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSEN 610
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+++F+KM+ L F + VL+A L + +H+
Sbjct: 611 DCPENTLQIFSKMRVAVSKLNPF-------------ALTSVLRAAVCLSSVVLGKGIHAC 657
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K ++ + + AL+ YA+CG+I ++ F+ +T D++ W+ ++ YA Q ++A
Sbjct: 658 SVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQA 717
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
+LF M +V P+ + S+L AC++ L+ G ++
Sbjct: 718 FELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQI 755
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 162/351 (46%), Gaps = 32/351 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ ACA + Q+H H I +LFV N LI++YAK ++ + +F +
Sbjct: 737 SSVLQACANMPLLDLGKQIHNHAIKI--GHESELFVGNALIDLYAKCSDMESSLEIFSSL 794
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN-EFSLASVLISCDYL----HGK 123
N VSW +I GY++ G E +F + P+ + + +SVL +C H
Sbjct: 795 RDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVG 854
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
VH L K + ++ V+N+LI+ Y+K C +A ++FE ++ +++SWN++I+ +
Sbjct: 855 QVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGY---- 910
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHS 240
A+ A M E LF + + + + TF +L C GLV++ S S
Sbjct: 911 ----AVHGQAAMAQE-----LFDMMSKNSIKANDITFVALLSVCGSTGLVSQ-GLSLFDS 960
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQ-VFDKMTYHDLVSWNSILKAYALHGQAK 299
+ +G E ++ R G ++ + + D + + W ++L + +H +
Sbjct: 961 MRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVE 1020
Query: 300 EALQLFSN---MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
L FS + ++P D T+V L + S AG + + F + N GV
Sbjct: 1021 --LGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQ-VAFFRKSMRNIGV 1068
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 28/277 (10%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
+HG +V + L LD ++ AN L+NMY+K A +VF+ + RN++S+ +++
Sbjct: 450 VHGHVVRSGGLA-RLD--LFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGH 506
Query: 179 RACKLEAQAIELFAKMKNE-EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
++ E EEA LF++L+ EG + + VLK + T A
Sbjct: 507 --------------ALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWG 552
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH+ K G + + + +ALI AY+ CG +S +++VFD + D V+W +++ Y+ +
Sbjct: 553 VHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDC 612
Query: 298 AKEALQLFSNMNV-----QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
+ LQ+FS M V P + T V + C + ++ +G H+ +
Sbjct: 613 PENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKG---IHACSVKTLYDTERHV 669
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
Y ++D+ + G I +A +L EM D ++WS+++
Sbjct: 670 YGALLDMYAKCGNIEDA-RLAFEMVTNDDVILWSLMI 705
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 4 STQI-YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
STQ+ Y+++ ACA +I Q+H + + N D V+N LI+ YAK G + DAR
Sbjct: 832 STQVTYSSVLRACASTASINHVGQVHCLIEKSTFN--SDTIVSNSLIDSYAKCGCIRDAR 889
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
+F+ + + ++VSW A+ISGYA HG A LF
Sbjct: 890 EIFETLKECDLVSWNAIISGYAVHGQAAMAQELF 923
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 344/605 (56%), Gaps = 38/605 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A +G I+ A +L + ++ ++ N L+ Y + LDDAR LFD
Sbjct: 187 WNGLLSAYVQNGRIEDARRLFDSKMD------WEIVSWNCLMGGYVRKKRLDDARSLFDR 240
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVH 126
MP R+ +SW +I+GYAQ+G E RLF L P A + ++S +G L
Sbjct: 241 MPVRDKISWNIMITGYAQNGLLSEARRLFEEL-----PIRDVFAWTAMVSGFVQNGMLDE 295
Query: 127 ALALKFSLDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A + + V+ NA+I Y +S ++A ++F+ M RN SWN+M+ + C
Sbjct: 296 ATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNI 355
Query: 185 AQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKAC 226
QA LF +M EEAL LF +++R+G + + L +C
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
A + +H + K GF+ + NAL+ Y +CGSI + VF+ +T D+VSWN
Sbjct: 416 AEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWN 475
Query: 287 SILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
+++ YA HG KEAL LF +M ++PD T V +LSACSH G V +G + F+SM +N+
Sbjct: 476 TMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNY 535
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
G+ HY CM+DLLGR GR+ EA L++ MP PD+ W LLG+ R HG+T L E A
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKA 595
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
A K+ ++EP +S +V +SN+Y SG + + R +R +M+ V+K PG SW+EI+N+ H
Sbjct: 596 AEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHI 655
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F G HP+ E I+ LEEL +LK G+V T L LHD+EEE KE L +HSEKLA+
Sbjct: 656 FTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 715
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
F I+ S+ R IR++KN+R+C DCHN +K S + ++I+VRDSNRFHHF + CS
Sbjct: 716 FGIL---SIPPGRP-IRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCS 771
Query: 585 CNDYW 589
C DYW
Sbjct: 772 CGDYW 776
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 177/380 (46%), Gaps = 37/380 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+DL N +++ Y K G L AR LF++MP+++VVSW A++SG+AQ+G EE ++F +
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLVHALALKFS-LDAHVYVANALINMY-SKSCADEAW 157
L NE S L+S +G++ A L S +D + N L+ Y K D+A
Sbjct: 180 L---VKNEISWNG-LLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDAR 235
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EE 199
+F+ M R+ ISWN MI + L ++A LF ++ +E
Sbjct: 236 SLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDE 295
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A +F ++ E W AG V + L + +T N ++
Sbjct: 296 ATRIFEEMP-EKNEVSWNAM------IAGYVQSQQIEKARELFDQMP-SRNTSSWNTMVT 347
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP---DSAT 316
YA+CG+I +K +FD+M D +SW +++ YA GQ++EAL LF M + +
Sbjct: 348 GYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSA 407
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
LS+C+ ++ G K H L G ++ + G+ G I EA + ++
Sbjct: 408 LACALSSCAEIAALELG-KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI 466
Query: 377 PMEPDSVIWSVLLGSCRKHG 396
E D V W+ ++ +HG
Sbjct: 467 T-EKDIVSWNTMIAGYARHG 485
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 154/376 (40%), Gaps = 74/376 (19%)
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALK 131
++V W IS Y + G E +F + +
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRR------------------------------ 88
Query: 132 FSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
NA+I+ Y S + D A KVFE M R++ISWN M++
Sbjct: 89 ----RSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSG------------- 131
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFE 248
+ K N A LF Q+ + D +++ +L A G V E L+
Sbjct: 132 YVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----- 182
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
+ + N L+ AY + G I ++++FD ++VSWN ++ Y + +A LF M
Sbjct: 183 -NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM 241
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRI 366
V+ D ++ +++ + GL+ E ++F + P D +A MV + G +
Sbjct: 242 PVR-DKISWNIMITGYAQNGLLSEARRLFEEL-------PIRDVFAWTAMVSGFVQNGML 293
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
EA ++ EMP E + V W+ ++ + +++ E A Q+ ++ + M Y
Sbjct: 294 DEATRIFEEMP-EKNEVSWNAMIAG---YVQSQQIEKARELFDQMPSRNTSSWNTMVTGY 349
Query: 427 CLSGSFNKARLIRKEM 442
G+ ++A+++ EM
Sbjct: 350 AQCGNIDQAKILFDEM 365
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/592 (40%), Positives = 335/592 (56%), Gaps = 30/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + ACA + + +++H ++ D FV LIN+Y K G++D+A +FD+
Sbjct: 111 FPFVLKACARVLDSELGVKMHSLVVK--AGCEADAFVKISLINLYTKCGFIDNAFKVFDD 168
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHG 122
+P +N SWTA ISGY G E +F LL+ P+ FSL VL +C D G
Sbjct: 169 IPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG 228
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ + + + +V+VA AL++ Y K C + A VF+ M +N++SW+SMI + +
Sbjct: 229 EWIDEYITENGMVRNVFVATALVDFYGK-CGNMERARSVFDGMLEKNIVSWSSMIQGYAS 287
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L +A++LF KM NE G+ PD VL +CA L +
Sbjct: 288 NGLPKEALDLFFKMLNE-------------GLKPDCYAMVGVLCSCARLGALELGDWASN 334
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
LI F D++V+ ALI YA+CG + + +VF M D V WN+ + A+ G K+
Sbjct: 335 LINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKD 394
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL LF M ++PD TFV LL AC+HAGLV+EG + F+SM + P+++HY CMV
Sbjct: 395 ALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMV 454
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G + EA +LI+ MPME ++++W LLG CR H +T+L E+ KL LEP S
Sbjct: 455 DLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSG 514
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SNIY S + +A IR M V+K PG SWIE++ VH+F G HP E
Sbjct: 515 NYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEK 574
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+ KL EL LK GYVP T L DIEEE KE + HSEKLA+ F +++
Sbjct: 575 IYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAP----N 630
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I ++KN+R+C DCH +K S + G+EI+VRD+NRFH F D +CSC DYW
Sbjct: 631 DKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 19/273 (6%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINM-YSKSCADEAWKVFENMEFRNVISWNSMIAAFR 179
H K +HA L+ LD Y+ N ++ ++ + ++++ + + N+ +N+MI
Sbjct: 25 HLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLV 84
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
++IE++ M+ +EG++PD TF VLKACA ++ +H
Sbjct: 85 LNDCFQESIEIYHSMR-------------KEGLSPDSFTFPFVLKACARVLDSELGVKMH 131
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
SL+ K G E D + +LI+ Y +CG I + +VFD + + SW + + Y G+ +
Sbjct: 132 SLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCR 191
Query: 300 EALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ +F M ++PDS + V +LSAC G ++ G + + EN G+V + +
Sbjct: 192 EAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITEN-GMVRNVFVATAL 250
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
VD G+ G + A + M +E + V WS ++
Sbjct: 251 VDFYGKCGNMERARSVFDGM-LEKNIVSWSSMI 282
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
G +H +H+ + + G ++DT + N ++ G+ + S ++ D+ ++ +N+
Sbjct: 19 GFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNT 78
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
+++ L+ +E+++++ +M + PDS TF +L AC+ + G K+ HS++
Sbjct: 79 MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKM-HSLVVKA 137
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS------VLLGSCRK 394
G +++L + G I A K+ ++P + + W+ V +G CR+
Sbjct: 138 GCEADAFVKISLINLYTKCGFIDNAFKVFDDIP-DKNFASWTATISGYVGVGKCRE 192
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/558 (38%), Positives = 341/558 (61%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV + L++MYAKFG + DAR + D++ ++VV +TALI GY+ HG E ++F ++
Sbjct: 211 NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMT 270
Query: 101 QYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ NE++L+SVL+ C D G+L+H L +K L++ V +L+ MY + D
Sbjct: 271 KKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVD 330
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
++ KVF+ N ++W S+I + EE AL FRQ+ R + P
Sbjct: 331 DSLKVFKQFINPNQVTWTSVIVGL-------------VQNGREEIALLKFRQMLRSSITP 377
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T S VL+AC+ L +H+++ K+G + D + ALI Y +CGS +++ VF
Sbjct: 378 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 437
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+ + D+VS NS++ +YA +G EALQLFS M ++P++ T++ +LSAC++AGL++
Sbjct: 438 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLE 497
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG +F S + + DHYACMVDLLGR GR+ EAE LI ++ + D VIW LL +
Sbjct: 498 EGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSA 556
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR HG+ +A+ ++ L P D V +SN+Y +G+++K ++ M+ R++K P
Sbjct: 557 CRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNP 616
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
+SW+++E +H F +G HP I +KLEELI ++K +GYVP+T L D++EE K
Sbjct: 617 AMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKI 676
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
LY+HSEKLA+ FA+ + + IRI+KN+R+C DCH +MK S ++G++I+ RD
Sbjct: 677 RSLYYHSEKLAVAFALWRSN---YKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARD 733
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHF++ +CSC DYW
Sbjct: 734 VKRFHHFRNGLCSCGDYW 751
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 209/441 (47%), Gaps = 66/441 (14%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
+ ST++Y++L C +I ++ H + + + N LI+ Y K G + A
Sbjct: 74 IQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS----LGNKLIDAYLKCGSVVYA 129
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL 120
R +FDE+P R++V+W ++I+ Y ++G ++E ++ ++ P+EF+ +SV + L
Sbjct: 130 RKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDL 189
Query: 121 ----HGKLVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
G+ H ++ + ++V+V +AL++MY+K +A V + + ++V+ + ++
Sbjct: 190 GLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTAL 249
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I ++ + E+L +FR + ++G+ + T S VL C L
Sbjct: 250 IVG-------------YSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTS 296
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H LI K G E +L+ Y RCG + S +VF + + V+W S++
Sbjct: 297 GRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQ 356
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+G+ + AL F M ++ P+S T S+L ACS ++++G ++ H+++ G+ +D
Sbjct: 357 NGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQI-HAIVMKFGL--DID 413
Query: 352 HY--ACMVDLLGRVGR----------ILEAEKL------------------------IRE 375
Y A ++D G+ G +LE + + +++
Sbjct: 414 KYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD 473
Query: 376 MPMEPDSVIWSVLLGSCRKHG 396
+EP++V W +L +C G
Sbjct: 474 TGLEPNNVTWLGVLSACNNAG 494
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+S +++ C G+ + + + S K GF + N LI AY +CGS+ +++VFD++
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVP 137
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
+ +V+WNS++ +Y +G++KEA+ ++ M + PD TF S+ A S GLV EG +
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197
Query: 336 VFHSMLENHGV-VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
H GV V + + +VD+ + G++ +A +L+ + + D V+++ L+
Sbjct: 198 A-HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA-RLVSDQVVGKDVVLFTALIVGYSH 255
Query: 395 HGE 397
HGE
Sbjct: 256 HGE 258
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/595 (38%), Positives = 345/595 (57%), Gaps = 33/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A + A G +++ +Q+H +I + + +FV N ++NMY+K + DA+ +FD
Sbjct: 196 FAAVLGGLAADGAVEKGVQVHTMVIKSGLDST--IFVGNSMVNMYSKSLMVSDAKAVFDS 253
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-------CSLLQYFFPNEFSLASVLISCDYL 120
M RN VSW ++I+G+ +G E F LF L Q F L + + +
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSF- 312
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENME-FRNVISWNSMIAAF 178
K +H +K D + + AL+ YSK S D+A+K+F M +NV+SW ++I+ +
Sbjct: 313 -AKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGY 371
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG-LVTERHASA 237
+A+ LF +M+ EE G+ P+ TFS VL ACA +
Sbjct: 372 VQNGRTDRAMNLFCQMRREE------------GVEPNEFTFSSVLNACAAPTASVEQGKQ 419
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
HS K GF + +++AL+ YA+ G+I + +VF + DLVSWNS++ YA HG
Sbjct: 420 FHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGC 479
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
K++L++F M N++ D TF+ ++SAC+HAGLV EG + F M++++ +VP ++HY+
Sbjct: 480 GKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYS 539
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDL R G + +A LI +MP + IW LL +CR H +L ELAA KL L+P
Sbjct: 540 CMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQ 599
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
DS +V +SNIY +G++ + +RK M +V+K G SWIE++N+ F +G HPQ
Sbjct: 600 DSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQ 659
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I+ KLEEL +LK GY P+T LHD+EEEHKE L HSE+LA+ F ++
Sbjct: 660 SDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLI----AT 715
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+I+KN+R+C DCH +KL S + G++IVVRDSNRFHHFK CSC DYW
Sbjct: 716 PPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 197/368 (53%), Gaps = 25/368 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ V L++MY K ++D +FDEM +NVVSWT+L++GY Q+G E+ +LF +
Sbjct: 125 EDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQM 184
Query: 100 -LQYFFPNEFSLASVL--ISCDYL--HGKLVHALALKFSLDAHVYVANALINMYSKSC-A 153
L+ PN F+ A+VL ++ D G VH + +K LD+ ++V N+++NMYSKS
Sbjct: 185 QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMV 244
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A VF++ME RN +SWNSMIA F L+ +A ELF +M+ EG+
Sbjct: 245 SDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR-------------LEGVK 291
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
F+ V+K CA + A +H + K G + D I AL+ AY++C I + ++
Sbjct: 292 LTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKL 351
Query: 274 FDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAG 328
F M ++VSW +I+ Y +G+ A+ LF M V+P+ TF S+L+AC+
Sbjct: 352 FCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPT 411
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
E K FHS G L + +V + + G I A ++ + ++ D V W+ +
Sbjct: 412 ASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSM 470
Query: 389 LGSCRKHG 396
+ +HG
Sbjct: 471 ISGYAQHG 478
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 171/352 (48%), Gaps = 27/352 (7%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISC-- 117
++ LFDE P++ + L+ ++++ +E LF L + P + SL+ VL C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSM 174
D + GK VH +K V V +L++MY K+ ++ +VF+ M +NV+SW S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+A +R L QA++LF+ Q+Q EG+ P+ TF+ VL A
Sbjct: 165 LAGYRQNGLNEQALKLFS-------------QMQLEGIKPNPFTFAAVLGGLAADGAVEK 211
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH+++ K G + + N++++ Y++ +S +K VFD M + VSWNS++ +
Sbjct: 212 GVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVT 271
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN--KVFHSMLENHGVVPQ 349
+G EA +LF M V+ F +++ C++ ++E + K H + +G
Sbjct: 272 NGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN---IKEMSFAKQLHCQVIKNGSDFD 328
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
L+ ++ + I +A KL M + V W+ ++ ++G T A
Sbjct: 329 LNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRA 380
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 36/350 (10%)
Query: 4 STQIYATLFHACALHGNIKQ---AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ I+AT+ CA NIK+ A QLH +I N DL + L+ Y+K +DD
Sbjct: 293 TQTIFATVIKLCA---NIKEMSFAKQLHCQVIKN--GSDFDLNIKTALMVAYSKCSEIDD 347
Query: 61 ARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC 117
A LF M +NVVSWTA+ISGY Q+G + LFC + + PNEF+ +SVL +C
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNAC 407
Query: 118 -----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
GK H+ ++K + V++AL+ MY+K + A +VF+ R+++SW
Sbjct: 408 AAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSW 467
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGL 229
NSMI+ +A+ +++L +F +++ + + D TF V+ AC AGL
Sbjct: 468 NSMISG-------------YAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGL 514
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSI 288
V E ++ Y + ++ Y+R G + + + +KM + + W ++
Sbjct: 515 VNEGQ-RYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTL 573
Query: 289 LKAYALHGQAKEA-LQLFSNMNVQP-DSATFVSLLSACSHAGLVQEGNKV 336
L A +H + L +++QP DSA +V L + + AG QE KV
Sbjct: 574 LAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKV 623
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/598 (38%), Positives = 353/598 (59%), Gaps = 44/598 (7%)
Query: 14 ACALHGNIKQAMQLHEH-MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRN 72
+C+ ++ Q H+ ++ F + DLFV++ LI+MY+K G L +AR LFDE+P+RN
Sbjct: 91 SCSALFDLNSGKQAHQQALVFGFES---DLFVSSALIDMYSKCGKLSNARVLFDEIPRRN 147
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE------------FSLASVLISCDYL 120
+V+WT+LI+GY Q+ +A E +F L F +E ++ SVL +C +
Sbjct: 148 IVTWTSLITGYVQNDDAHEALMVFKEFL--FEKSEGNGEEVGTSVDSVAMISVLSACSRV 205
Query: 121 HGKLV----HALALKFSLDAHVYVANALINMYSKSCADEAW--KVFENMEFRNVISWNSM 174
K V H +A+K LD + V N L++ Y+K C + + KVF++M ++V+SWNSM
Sbjct: 206 SNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAK-CGEVSLSRKVFDDMAEKDVVSWNSM 264
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
IA + L A E+F M L+ G + T S +L ACA R
Sbjct: 265 IAVYAQNGLSTDAFEVFHGM------------LKAGGGKYNEVTLSTLLLACAHEGALRV 312
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H + K G+ ++ ++A ++I Y +CG +++ FD M ++ SW +++ Y +
Sbjct: 313 GMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGM 372
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG A+EAL +F M V+P+ TF+S+L+ACSHAG ++EG + F++M + V P ++
Sbjct: 373 HGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVE 432
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY CMVDLLGR G I EA LI+ M + D V+W LL +CR H + LAE++A +L +L
Sbjct: 433 HYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKL 492
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+P + +V ++NIY +G + +R +K + K PG S +E++ RVH F G K
Sbjct: 493 DPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKE 552
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HPQ E I+K LEEL +L+ GYVP + LHD++EE KE + HSEKLA+ F +MN
Sbjct: 553 HPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNS- 611
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I ++KN+R+C DCH +KL S ++ +EI+VRD+ RFHHFKD +CSC DYW
Sbjct: 612 ---IPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 31/244 (12%)
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+V SWNS+IA A+ + E+L F +++ + P+ TF +K+C
Sbjct: 46 DVYSWNSLIAEL-------------ARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSC 92
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
+ L H +GFE D +++ALI Y++CG +S ++ +FD++ ++V+W
Sbjct: 93 SALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWT 152
Query: 287 SILKAYALHGQAKEALQLFS------------NMNVQPDSATFVSLLSACSHAG--LVQE 332
S++ Y + A EAL +F + DS +S+LSACS V E
Sbjct: 153 SLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSE 212
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G H + G+ + ++D + G + + K+ +M E D V W+ ++
Sbjct: 213 G---VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMA-EKDVVSWNSMIAVY 268
Query: 393 RKHG 396
++G
Sbjct: 269 AQNG 272
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 105/196 (53%), Gaps = 16/196 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+TL ACA G ++ M LH+ +I + N ++ + +I+MY K G + AR+ FD
Sbjct: 298 STLLLACAHEGALRVGMCLHDQVIKMGYVN---NVIMATSIIDMYCKCGQAEMARNAFDG 354
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL-----H 121
M ++NV SWTA+I+GY HG A E +F ++ PN + SVL +C +
Sbjct: 355 MKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG 414
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEF-RNVISWNSMIAAFR 179
+ +A++ +++++ V ++++ ++ EA+ + ++M+ R+ + W S++AA R
Sbjct: 415 WRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACR 474
Query: 180 ACK----LEAQAIELF 191
K E A ELF
Sbjct: 475 IHKDVELAEISARELF 490
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 336/594 (56%), Gaps = 54/594 (9%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F Y + AC++ GN+ +Q+H ++ +L++ N L++MY K +LD
Sbjct: 133 FYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVK--LGLDMNLYIGNGLVSMYGKCKWLDA 190
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCD 118
AR + DEMP R++VSW ++++GYAQ+G + +L C ++ P+ ++ S+L +
Sbjct: 191 ARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKL-CREMEDLKLKPDAGTMGSLLPA-- 247
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAF 178
S D +YV + + + KS +ISWN MIA +
Sbjct: 248 ----------VTNTSCDNVLYVKDMFVKLKEKS----------------LISWNVMIAVY 281
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ +A++L+ Q+Q G+ PD + S VL AC L +
Sbjct: 282 VNNAMPNEAVDLYL-------------QMQVHGVEPDAVSISSVLPACGDLSAAVLGRRI 328
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + + + ++ NALI YA+CG + ++ VFD+M + D+VSW S++ AY + GQ
Sbjct: 329 HEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQG 388
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
K+A+ LF M PD FVS+L+ACSHAGLV EG F+ M E +G+ P ++HY C
Sbjct: 389 KDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNC 447
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDLLGR G+I EA L R+MPMEP+ +W LL +CR + +A LAA L QL P
Sbjct: 448 MVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQ 507
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S +V +SNIY +G + +R M ++K PG S +EI + V+ F +G + H Q
Sbjct: 508 SGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQS 567
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+K L L+G++K +GY+PET ALHD+EEE KE L HSEKLA+VFAI+N +
Sbjct: 568 KEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNT----K 623
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S IRI KNIR+C DCH KL S + +EI++RD++RFHHF+D +CSC DYW
Sbjct: 624 PGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PD 313
L+ AYA CG ++ +FD++T ++V +N ++++Y +G ++AL +F M Q PD
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
+ T+ +L ACS +G + G ++ H + G+ L +V + G+ + A +++
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQI-HGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVL 195
Query: 374 REMPMEPDSVIWSVLLGSCRKHG 396
EMP D V W+ ++ ++G
Sbjct: 196 DEMPGR-DMVSWNSMVAGYAQNG 217
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/612 (36%), Positives = 365/612 (59%), Gaps = 35/612 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++ ACA G++ A ++H+ I N +DL + N LI+M+ K +++ AR +FD
Sbjct: 79 VLLSVAKACAASGDLVVAKKIHDDAIQFGFN--KDLVLGNALIDMFGKCKFVNGARCVFD 136
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC-DYLH-GK 123
+M ++VVSWT++ Y G + LF + L N +++S+L +C DY+ G+
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKLGR 196
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
VH L+ ++ +VYV++AL+NMY+ S +A VF++M R+++SWN M+ A+ K
Sbjct: 197 EVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNK 256
Query: 183 LEAQAIELFAKMKNE----------------------EEALFLFRQLQREGMAPDWCTFS 220
+ + LF +M+ E E AL + ++Q G+ P+ T
Sbjct: 257 EYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIV 316
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
L C L + R +H + ++ F +D I AL+ YA+CG + LS+ VF+ M
Sbjct: 317 SALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRK 376
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+V+WN+++ A ++HG+ E+L LF+ M V+P+S TF+ +LS CSH+ L EG VF
Sbjct: 377 DVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVF 436
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+SM H + P DHY+CMVD+L R GR+ EA IR+MP+EP + W LLG+CR +
Sbjct: 437 NSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKN 496
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
L LAA++L ++EP ++ +V +SNI + + +A IRK M+ + K PG SW++
Sbjct: 497 VELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQ 556
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHH 517
++N+V+ F +G K + Q++ I++ L+E+ +++ GY P T L ++++E +EE L H
Sbjct: 557 VKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSH 616
Query: 518 SEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHH 577
SE+LA+ F I+N ++ +R+ KN+RIC DCHN +KL + ++G +I+VRDS RFHH
Sbjct: 617 SERLAVAFGILNSSG----KTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHH 672
Query: 578 FKDRICSCNDYW 589
F+D C+CND+W
Sbjct: 673 FRDGYCTCNDFW 684
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 182/394 (46%), Gaps = 61/394 (15%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPN 106
LI G L A +LFD++P+ ++ +WT LISG+ QHG ++ ++ +LL + P+
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 107 EFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
+F L SV +C D + K +H A++F + + + NALI+M+ K + A VF+
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
+M ++V+SW SM + C + Q I LFR++ G+ + T S
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGI-------------LLFREMGLNGIRANSLTVSS 183
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
+L ACA + + VH I + E + +++AL++ YA + ++ VFD M + D
Sbjct: 184 ILPACADYI--KLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRD 241
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM--------------------------------- 308
+VSWN +L AY L+ + + L LF M
Sbjct: 242 IVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILC 301
Query: 309 -----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
++P+ T VS L C++ ++ G K H + H + + +V L +
Sbjct: 302 KMQDSGIKPNRITIVSALPGCTNLESLR-GGKEIHGYVFRHWFIEDVTITTALVLLYAKC 360
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
G + + + MP + D V W+ ++ + HG+
Sbjct: 361 GDLELSRHVFNTMPRK-DVVAWNTMIMANSMHGK 393
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/592 (38%), Positives = 343/592 (57%), Gaps = 31/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC+ +KQ Q+H+ +I D V L++MYAK G L DAR++F+
Sbjct: 410 FMSILGACSRPSALKQGRQIHDRIIK--AGYITDDRVRTALLSMYAKCGSLMDARNVFER 467
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC---DYLH-G 122
+ K+NVV+W A+I+ Y QH + F +LL+ P+ + S+L C D L G
Sbjct: 468 ISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG 527
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K V +L ++ ++ +++ NAL++M+ +C D A +F +M R+++SWN++IA F
Sbjct: 528 KWVQSLIIRAGFESDLHIRNALVSMFV-NCGDLMSAMNLFNDMPERDLVSWNTIIAGF-- 584
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + A F+ +Q G+ PD TF+ +L ACA +H+
Sbjct: 585 -----------VQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHA 633
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
LI + + D V+ LI Y +CGSI + VF + ++ SW S++ YA HG+ KE
Sbjct: 634 LITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKE 693
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M V+PD TFV LSAC+HAGL++EG F SM ++ + P+++HY CMV
Sbjct: 694 ALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMV 752
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DL GR G + EA + I +M ++PDS +W LLG+C+ H + LAE A K +L+P D
Sbjct: 753 DLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDG 812
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SNIY +G + + +RK M V K PG SWIE++ RVH F S K HPQ E
Sbjct: 813 VYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEE 872
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +L L ++K +GYVP+T LHD+E+ KE L HHSE+LA+ + ++ L
Sbjct: 873 IHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPL---- 928
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I I KN+R+C DCH KL S + ++I+ RDSNRFHHFKD +CSC D+W
Sbjct: 929 TPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 214/407 (52%), Gaps = 34/407 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + +ACA N+ + +L ++N DLFV LINM+ K G +DDA +F+
Sbjct: 208 FVYMLNACADAKNVDKGGELFSLILN--AGWDTDLFVGTALINMHIKCGGVDDALKVFNN 265
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-----FPNEFSLASVLISCDYL-- 120
+P+R++++WT++I+G A+H F+ C+L Q P++ + S+L +C++
Sbjct: 266 LPRRDLITWTSMITGLARHRQ----FKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEA 321
Query: 121 --HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
GK VHA + LD +YV AL++MY+K ++A +VF ++ RNV+SW +MIA
Sbjct: 322 LEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F A+ EEA F ++ G+ P+ TF +L AC+ +
Sbjct: 382 F-------------AQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H I K G+ D + AL+ YA+CGS+ ++ VF++++ ++V+WN+++ AY H +
Sbjct: 429 IHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEK 488
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A+ F + ++PDS+TF S+L+ C ++ G K S++ G L
Sbjct: 489 YDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRN 547
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+V + G ++ A L +MP E D V W+ ++ +HGE + A
Sbjct: 548 ALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 222/431 (51%), Gaps = 29/431 (6%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y++L C H N+ ++H H+ F D+F+ N LI+MYAK G + A+ +F
Sbjct: 105 QTYSSLLQLCIKHKNLGDGERIHNHI--KFSKIQPDIFMWNMLISMYAKCGNTNSAKQIF 162
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYL 120
DEMP ++V SW L+ GY QH EE FRL ++Q P++++ +L +C +
Sbjct: 163 DEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVD 222
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G + +L L D ++V ALINM+ K D+A KVF N+ R++I+W SMI
Sbjct: 223 KGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITG-- 280
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+ + ++A LF+ ++ EG+ PD F +LKAC VH
Sbjct: 281 -----------LARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVH 329
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + + G + + + AL+ Y +CGS+ + +VF+ + ++VSW +++ +A HG+ +
Sbjct: 330 ARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRME 389
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA F+ M ++P+ TF+S+L ACS +++G ++ H + G + +
Sbjct: 390 EAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQI-HDRIIKAGYITDDRVRTAL 448
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLEPG 414
+ + + G +++A + + + + V W+ ++ + +H + +A A + ++P
Sbjct: 449 LSMYAKCGSLMDARNVFERISKQ-NVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP- 506
Query: 415 DSLGFVQMSNI 425
DS F + N+
Sbjct: 507 DSSTFTSILNV 517
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/599 (37%), Positives = 343/599 (57%), Gaps = 30/599 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ + + L +CA ++ + +H ++++ QD F+ LINMY + G +D AR
Sbjct: 77 TQRTFEHLICSCAQQNSLSDGLDVHRRLVSS--GFDQDPFLATKLINMYYELGSIDRARK 134
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISC----- 117
+FDE +R + W AL A G +E L+ + P++ F+ VL +C
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSEL 194
Query: 118 ---DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
GK +HA L+ +A+++V L+++Y+K A VF M +N +SW++
Sbjct: 195 SVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSA 254
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MIA F ++ +A+ELF M L+ P+ T VL+ACAGL
Sbjct: 255 MIACFAKNEMPMKALELFQLM-----------MLEAHDSVPNSVTMVNVLQACAGLAALE 303
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H I + G + + NALI Y RCG I + ++VFD M D+VSWNS++ Y
Sbjct: 304 QGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYG 363
Query: 294 LHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+HG K+A+Q+F NM Q P +F+++L ACSHAGLV+EG +F SML + + P +
Sbjct: 364 MHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGM 423
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HYACMVDLLGR R+ EA KLI +M EP +W LLGSCR H LAE A+T L +
Sbjct: 424 EHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFE 483
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP ++ +V +++IY + +++A+ + K ++ ++K PG SWIE++ +V+ F S +
Sbjct: 484 LEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDE 543
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+PQ E I L +L ++K GYVP+T++ L+D++EE KE + HSEKLA+ F ++N
Sbjct: 544 HNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINT 603
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH K S +EI+VRD NRFHHFKD +CSC DYW
Sbjct: 604 ----VKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/650 (36%), Positives = 354/650 (54%), Gaps = 73/650 (11%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
+ T I+ L + A G I A +L + M +D F N ++++YAK G ++D R
Sbjct: 56 NDTFIHNRLLNLYAKSGEISHARKLFDEMTQ------RDNFSWNAMLSLYAKSGLVEDLR 109
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC---- 117
+FD MP R+ VS+ +ISG+A +G +F + + P E++ SVL +C
Sbjct: 110 VIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLL 169
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMI 175
D GK +H + +L +V+V NAL ++Y++ C D+A ++F+ M RNV++WN MI
Sbjct: 170 DLRRGKQIHGRIIICNLGGNVFVCNALTDLYAR-CGEIDQARRLFDRMVIRNVVTWNLMI 228
Query: 176 AAFRACKLEAQAIELFAKMK---------------------------------------- 195
+ + + + I+LF +M+
Sbjct: 229 SGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEV 288
Query: 196 -------------NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
EE+AL LF ++ E PD T S V+ +CA L + H VH
Sbjct: 289 CWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKA 348
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
G DD ++++AL+ Y +CG + +F M ++VSWNS++ YAL+GQ EAL
Sbjct: 349 FLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEAL 408
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
L+ NM N++PDS TFV +LSAC HAGLV+EG + F SM + HG+ P DHYACMV+L
Sbjct: 409 SLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNL 468
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
GR G + +A LI M EP+S+IW+ +L C G+ + E+AA L +L P +++ +
Sbjct: 469 FGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPY 528
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
+ +SN+Y G + IR MK V+K+ SWIEI+N VH+F + + HP + I
Sbjct: 529 IMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIH 588
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+L LI +L+ G+ P T+L LHD E+ K E + +HSEKLAL + ++ + +
Sbjct: 589 VQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKP---HGVTP 645
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KNIR C DCH FMK S++ + +++RDSNRFHHF + CSC DYW
Sbjct: 646 IRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/609 (37%), Positives = 350/609 (57%), Gaps = 41/609 (6%)
Query: 14 ACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRN 72
ACA ++ A ++HE I F + D+ + N LI+MY K + AR +F+ MP R+
Sbjct: 87 ACASLRDVMNAKRVHEDAIRFGFCS---DVLLGNALIDMYGKCRCSEGARLVFEGMPFRD 143
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKLVHA 127
V+SWT++ S Y G E F + L PN +++S+L +C D G+ VH
Sbjct: 144 VISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHG 203
Query: 128 LALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
++ + +V+V++AL+NMY+ SC +A VF++M R+ +SWN +I A+ K
Sbjct: 204 FVVRNGMGGNVFVSSALVNMYA-SCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECE 262
Query: 186 QAIELFAKMKNE----------------------EEALFLFRQLQREGMAPDWCTFSIVL 223
+ + +F +M +E E+AL + ++Q G P+ T + VL
Sbjct: 263 KGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVL 322
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
AC L + R +H I ++ F D AL+ YA+CG + LS++VF MT D V
Sbjct: 323 PACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTV 382
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
SWN+++ A ++HG +EAL LF M V+P+S TF +LS CSH+ LV EG +F SM
Sbjct: 383 SWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSM 442
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
+H V P DH++CMVD+L R GR+ EA + I++MP+EP + W LLG CR + L
Sbjct: 443 SRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVEL 502
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
+AA +L ++E + +V +SNI + +++A RK M+ V K PG SWI++ N
Sbjct: 503 GRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRN 562
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEK 520
RVH F G K + Q + I++ L+ + +++ GY+P T L D+++E KEE L +HSEK
Sbjct: 563 RVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEK 622
Query: 521 LALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
LA+ F ++N S IR+ KN+RIC DCHN +K + ++G +I+VRDS RFHHF+D
Sbjct: 623 LAVAFGVLNLNG----ESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRD 678
Query: 581 RICSCNDYW 589
+CSC D+W
Sbjct: 679 GLCSCQDFW 687
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 185/394 (46%), Gaps = 60/394 (15%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFP 105
I +Y+ G L ARHLFD++P+ ++ +WT LIS +HG + E + + P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
++ L SV +C D ++ K VH A++F + V + NALI+MY K C++ A VF
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E M FR+VISW SM + + C L EAL FR++ G P+ T S
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGL-------------LREALGAFRKMGLNGERPNSVTVS 183
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L AC L + VH + + G + +++AL++ YA C SI ++ VFD M+
Sbjct: 184 SILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRR 243
Query: 281 DLVSWNSILKAYAL-----------------------------------HGQAKEALQLF 305
D VSWN ++ AY L +G+ ++AL++
Sbjct: 244 DTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVL 303
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
S M +P+ T S+L AC++ ++ G K H + H L +V + +
Sbjct: 304 SRMQNSGFKPNQITITSVLPACTNLESLR-GGKQIHGYIFRHWFFQDLTTTTALVFMYAK 362
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G LE + + M + D+V W+ ++ + HG
Sbjct: 363 CGD-LELSRRVFSMMTKRDTVSWNTMIIATSMHG 395
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 20/264 (7%)
Query: 130 LKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
L SL H+ A I +YS S A +F+ + ++ +W +I+A +AI
Sbjct: 5 LPTSLPPHL--ALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAI 62
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
+ + + + + PD V KACA L +A VH ++GF
Sbjct: 63 QYYNDFR------------HKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFC 110
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
D ++ NALI Y +C ++ VF+ M + D++SW S+ Y G +EAL F M
Sbjct: 111 SDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKM 170
Query: 309 NV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
+ +P+S T S+L AC+ ++ G +V H + +G+ + + +V++
Sbjct: 171 GLNGERPNSVTVSSILPACTDLKDLKSGREV-HGFVVRNGMGGNVFVSSALVNMYASCLS 229
Query: 366 ILEAEKLIREMPMEPDSVIWSVLL 389
I +A+ + M D+V W+VL+
Sbjct: 230 IRQAQLVFDSMSRR-DTVSWNVLI 252
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/596 (38%), Positives = 344/596 (57%), Gaps = 58/596 (9%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFGY 57
F Y + AC+ N++ + +H ++ +F +LFV N LI MY K G
Sbjct: 115 FRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDF-----NLFVGNGLIAMYGKCGC 169
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLIS 116
L +AR +FDEM ++VVSW ++++GYA + ++ + + Y P+ ++AS
Sbjct: 170 LFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMAS---- 225
Query: 117 CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIA 176
L+ A+A S + +YV K+F N+E +N+ISWN MI
Sbjct: 226 -------LMPAVA-NTSSENVLYVE----------------KIFVNLERKNLISWNVMIR 261
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ L QA++L+ Q+++ + PD TF+ VL AC L
Sbjct: 262 VYMKNSLPTQAVDLYL-------------QMEKCRVEPDAITFASVLPACGDLSALLLGR 308
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H + K + ++ N+LI YARCG + +K+VFD+M + D+ SW S++ AY + G
Sbjct: 309 RIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTG 368
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
Q A+ LF+ M PDS FV++LSACSH+GL+ EG F M +++ + P+++HY
Sbjct: 369 QGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHY 428
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
AC+VDLLGR GR+ EA +I++MP+EP+ +W+ LL SCR + LAA L QL P
Sbjct: 429 ACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAP 488
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
S +V +SNIY +G + + IR MK ++RK PG+S +E+ N+VH F +G HP
Sbjct: 489 EQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHP 548
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
Q + I+++L L+ ++K +GYVPET ALHD+EEE KE L HSEKLA+VFA++N
Sbjct: 549 QSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNT--- 605
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH KL S ++ +EI+VRD+NRFHHFKD +CSC DYW
Sbjct: 606 --QEYQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%), Gaps = 26/243 (10%)
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
KVF+ M RNV+ +N MI ++ ++ L +FR++ G PD
Sbjct: 74 KVFDEMSDRNVVFYNVMIRSY-------------VNNHRYDDGLLVFREMVNGGFRPDNY 120
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+ VLKAC+ R+ +H + K G + + + N LI Y +CG + +++VFD+M
Sbjct: 121 TYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEM 180
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL--VQE 332
+ D+VSWNS++ YA + + +AL++ M +PD T SL+ A ++ V
Sbjct: 181 IWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLY 240
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP---MEPDSVIWSVLL 389
K+F + LE ++ + M+ + + +A L +M +EPD++ ++ +L
Sbjct: 241 VEKIFVN-LERKNLI----SWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVL 295
Query: 390 GSC 392
+C
Sbjct: 296 PAC 298
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+F ++ KA + +H++I + + L+ +YA CG L+++VFD+M
Sbjct: 20 SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEM 79
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ ++V +N ++++Y + + + L +F M +PD+ T+ +L ACS + ++ G
Sbjct: 80 SDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG- 138
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ H + G+ L ++ + G+ G + EA ++ EM + D V W+ ++
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEM-IWKDVVSWNSMVAG 194
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/593 (36%), Positives = 347/593 (58%), Gaps = 28/593 (4%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
++ ++ +C + +++ +H ++ DL+ N L+NMY+K +D R +F
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVR--LGMDCDLYTGNALMNMYSKLLGIDSVRKVF 163
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLI----SCDYL 120
+ MP+++VVS+ +I+GYAQ G E+ R+ + P+ F+L+SVL D L
Sbjct: 164 ELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVL 223
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFR 179
GK +H ++ +D+ VY+ ++L++MY+KS +++ +VF ++ R+ ISWNS++A +
Sbjct: 224 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGY- 282
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ EAL LFRQ+ + P FS V+ ACA L T +H
Sbjct: 283 ------------VQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLH 330
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + GF + IA+AL+ Y++CG+I ++++FD+M HD VSW +I+ +ALHG
Sbjct: 331 GYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGH 390
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ LF M V+P+ FV++L+ACSH GLV E F+SM + +G+ +L+HYA +
Sbjct: 391 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 450
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
DLLGR G++ EA I +M +EP +WS LL SC H LAE A K+ ++ +
Sbjct: 451 ADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENM 510
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V M N+Y +G + + +R ++ +RK P SWIE++N+ H F SG + HP +
Sbjct: 511 GAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMD 570
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I + L+ ++ Q++ GYV +TS LHD++EEHK E L+ HSE+LA+ F I+N
Sbjct: 571 RINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIIN----TEP 626
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KNIRIC DCH +K S + +EI+VRD++RFHHF CSC DYW
Sbjct: 627 GTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 19/260 (7%)
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
A+ +I++Y+ EA VF+ +E V++W S+I F L ++A+ F +M+
Sbjct: 42 ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRAS-- 99
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
G PD F VLK+C ++ R +VH I + G + D NAL++
Sbjct: 100 -----------GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMN 148
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
Y++ I ++VF+ M D+VS+N+++ YA G ++AL++ M +++PD+ T
Sbjct: 149 MYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFT 208
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
S+L S V +G ++ H + G+ + + +VD+ + RI ++E++ +
Sbjct: 209 LSSVLPIFSEYVDVLKGKEI-HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHL 267
Query: 377 PMEPDSVIWSVLLGSCRKHG 396
DS+ W+ L+ ++G
Sbjct: 268 -YRRDSISWNSLVAGYVQNG 286
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/587 (35%), Positives = 334/587 (56%), Gaps = 57/587 (9%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVV---------------------------- 74
FV + L+ MYAK G + DA+ +FDEM +NVV
Sbjct: 176 FVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDR 235
Query: 75 ---SWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVH 126
+WT +++G+ Q+G + F + Q ++++ S+L +C L GK +H
Sbjct: 236 DCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIH 295
Query: 127 ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A ++ D +V+V +AL++MYSK A F M +N+ISW ++I +
Sbjct: 296 AYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGY------- 348
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ EEA+ +F ++QR+G+ PD T V+ +CA L + + H L
Sbjct: 349 ------GQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVS 402
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G ++NAL+ Y +CGSI + ++FD+M +HD VSW +++ YA G+AKE + LF
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLF 462
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M +V+PD TF+ +LSACS AG V++G FHSM ++HG+VP DHY CM+DL R
Sbjct: 463 EKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSR 522
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
GR+ EAE+ I++MPM PD++ W LL +CR G+ + + AA L +++P + +V +
Sbjct: 523 SGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLL 582
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
+++ G++N+ +R+ M+ +V+K PG SWI+ +N+VH F++ + HP + I++KL
Sbjct: 583 CSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKL 642
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
E L ++ GY P+ S LHD+ + K + HHSEKLA+ F +M IRI
Sbjct: 643 EWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLM----FVPHEMPIRI 698
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+KN+R+CVDCHN KL S + G++I+VRD+ RFH F + +CSC D+W
Sbjct: 699 VKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 201/388 (51%), Gaps = 31/388 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+LF N L++ A LDD LF M +R+ VS+ A+I+G++ G RL+ +LL
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 101 Q---YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SC 152
+ P+ ++++++++ L G+ H L+ + +V + L+ MY+K
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN---------------- 196
+A +VF+ M+ +NV+ +N+MI CK+ +A LF M +
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250
Query: 197 --EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
E +AL FR+++ +G+A D TF +L AC L +H+ I + ++D+ +
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
+AL+ Y++C SI ++ F +M+ +++SW +++ Y +G ++EA+++FS M +
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
PD T S++S+C++ ++EG + FH + G++ + +V L G+ G I +A +
Sbjct: 371 PDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETR 399
L EM D V W+ L+ + G +
Sbjct: 430 LFDEMLFH-DQVSWTALVTGYAQFGRAK 456
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 231 TERHAS-AVHSLIAK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
TE HA+ A+H +I + T + N L+ AY + G + +++VFD + +L ++N++
Sbjct: 19 TEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNAL 78
Query: 289 LKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
L A + LF++M Q D+ ++ ++++ S G +++H++L
Sbjct: 79 LSTLAHARLLDDMDSLFASM-AQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLR 131
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/590 (38%), Positives = 337/590 (57%), Gaps = 28/590 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ ACA G Q+H M+ N D ++ L++MYAK G LDDA+ +FD +
Sbjct: 307 SSILKACAGSGAFNLGRQIHGFMVK--ANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI 364
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG----K 123
P+R++V W ALISG + E LFC + + F N +LA+VL S L +
Sbjct: 365 PQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTR 424
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
VHALA K + +V N LI+ Y K C + A++VFE ++I++ SMI A C
Sbjct: 425 QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCD 484
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ E+A+ LF ++ R+G+ PD S +L ACA L VH+ +
Sbjct: 485 -------------HGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHL 531
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K F D NAL++ YA+CGSI + F + +VSW++++ A HG K AL
Sbjct: 532 IKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRAL 591
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F M ++ P+ T S+L AC+HAGLV E + F+SM E G+ +HYACM+DL
Sbjct: 592 DVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDL 651
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G++ +A +L+ MP + ++ +W LL + R H + L LAA KL LEP S
Sbjct: 652 LGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTH 711
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V ++N Y +G ++ +RK MK S+V+K P +SW+E++++VH F G K HP+ I+
Sbjct: 712 VLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIY 771
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
KL+EL + GYVP + LHD+++ KE L HHSE+LA+ FA+++ + +
Sbjct: 772 AKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPA----GAP 827
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+RIC DCH K SD++ +EI++RD NRFHHF+D CSC DYW
Sbjct: 828 IRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 199/406 (49%), Gaps = 35/406 (8%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVT--NHLINMYAKFGYLD 59
+ S + L A ++ Q +H H++ + LF NHL++ Y+K
Sbjct: 1 MRSLETIGPLLTRYAATQSLLQGAHIHAHLLKS------GLFAVFRNHLLSFYSKCRLPG 54
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVL-ISC 117
AR +FDE+P VSW++L++ Y+ + + F S+ NEF L VL +
Sbjct: 55 SARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAP 114
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEF-RNVISWNSMI 175
D G +HALA+ L ++VANAL+ MY DEA VF+ RN +SWN ++
Sbjct: 115 DAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLM 174
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+A+ + A+++F +M G+ P+ FS V+ AC G
Sbjct: 175 SAYVKNDRCSHAVKVFGEM-------------VWGGVQPNEFGFSCVVNACTGSRDLEAG 221
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VH+++ + G++ D ANAL+ Y++ G I ++ VF K+ D+VSWN+ + LH
Sbjct: 222 RKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLH 281
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G + AL+L M + P+ T S+L AC+ +G G ++ M++ + D+
Sbjct: 282 GHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA---DSDN 338
Query: 353 YAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
Y +VD+ + G + +A+K+ +P + D V+W+ L+ C HG
Sbjct: 339 YIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISGC-SHG 382
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 58/396 (14%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV N L+ MY FG++D+AR +FDE +RN VSW L+S Y ++ ++F +
Sbjct: 134 DIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM 193
Query: 100 LQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ PNEF + V+ +C D G+ VHA+ ++ D V+ ANAL++MYSK
Sbjct: 194 VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDI 253
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A VF + +V+SWN+ I+ C L ++ AL L Q++ G+
Sbjct: 254 RMAAVVFGKVPETDVVSWNAFISG---CVLHGH----------DQHALELLLQMKSSGLV 300
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T S +LKACAG +H + K + D IA L+ YA+ G + +K+V
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLV 330
FD + DLV WN+++ + Q EAL LF M + + T ++L + + +
Sbjct: 361 FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAI 420
Query: 331 QEGNKVFHSMLENHGVVPQ-------LDHY------------------------ACMVDL 359
+ +V H++ E G + +D Y M+
Sbjct: 421 SDTRQV-HALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITA 479
Query: 360 LGRVGRILEAEKLIREM---PMEPDSVIWSVLLGSC 392
L + +A KL EM ++PD + S LL +C
Sbjct: 480 LSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNAC 515
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 153/339 (45%), Gaps = 46/339 (13%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
L G +HA LK L A N L++ YSK A +VF+ + +SW+S++ A+
Sbjct: 21 LQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAY 78
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHAS 236
+ +AL FR ++ + + +VLK AG T+ HA
Sbjct: 79 SNNAMP-------------RDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQLHAL 125
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALH 295
A+ + G D +ANAL+ Y G + ++ VFD+ + VSWN ++ AY +
Sbjct: 126 AMAT-----GLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
+ A+++F M VQP+ F +++AC+ + ++ G KV H+M+ G +
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKV-HAMVIRTGYDKDVFT 239
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
+VD+ ++G I A + ++P E D V W+ + C HG + A L+ L
Sbjct: 240 ANALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFISGCVLHGHDQHA------LELLL 292
Query: 413 PGDSLGFVQMSNIYCL---------SGSFNKARLIRKEM 442
S G V N++ L SG+FN R I M
Sbjct: 293 QMKSSGLV--PNVFTLSSILKACAGSGAFNLGRQIHGFM 329
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 98/183 (53%), Gaps = 14/183 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++L +ACA +Q Q+H H+I D+F N L+ YAK G ++DA F
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKR--QFMSDVFAGNALVYTYAKCGSIEDADLAFS 564
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
+P++ VVSW+A+I G AQHG+ + +F ++ ++ PN ++ SVL +C+ H LV
Sbjct: 565 GLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACN--HAGLV 622
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIA 176
+++ F ++ +I++ ++ D+A ++ +M F+ N W +++A
Sbjct: 623 DEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLA 682
Query: 177 AFR 179
A R
Sbjct: 683 ASR 685
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/594 (38%), Positives = 352/594 (59%), Gaps = 36/594 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHLF 65
+++ AC G+ + QLH + D V+ L++MYAK L +AR +F
Sbjct: 259 SSMLSACTELGSFRLGQQLHSLALR--LGLESDSCVSCGLVDMYAKSHNGQSLHNAREVF 316
Query: 66 DEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLL-QYFFPNEFSLASVLISC----DY 119
+ MPK NV++WTAL+SGY Q G+ + + LFC +L + PN + +S+L +C D
Sbjct: 317 NRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQ 376
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H +K +L V NAL++MY++S + +EA F+ + +N++S++ +
Sbjct: 377 DSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG- 435
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ + Q++R + TF ++ A A + +
Sbjct: 436 -----------------DGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRL 478
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+L K GF D I N+L+ Y+RCG + + QVFD+M H+++SW S++ A HG A
Sbjct: 479 HALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYA 538
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
AL+LF +M V+P+ T++++LSACSHAGLV+EG + F M ++HG++P+++HYAC
Sbjct: 539 ARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYAC 598
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDLLGR G + +A I EMP + D+++W LLG+C+ H + E+AA + QLEP D
Sbjct: 599 MVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQD 658
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+V +SN+Y +G +++ IR M+ + K GLSW+ ++N +HEF +G HPQ
Sbjct: 659 PAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQA 718
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
E I+ KLE LI ++K MGYVP+TS+ LHD+ +E KE L HSEK+A+ F +++ S +
Sbjct: 719 EEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATK 778
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+CVDCH+ +K S G+EI++RDSNRFH KD CSC +YW
Sbjct: 779 P---IRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 190/365 (52%), Gaps = 25/365 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V LI+M+AK G L R +FD + +R VV WT LI+ YAQ G ++E LF +L
Sbjct: 188 DVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDML 247
Query: 101 QYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
+ F P++++L+S+L +C L G+ +H+LAL+ L++ V+ L++MY+KS +
Sbjct: 248 ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQ 307
Query: 156 ----AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
A +VF M NV++W ++++ + + + + + LF ++ EG
Sbjct: 308 SLHNAREVFNRMPKHNVMAWTALLSGY------------VQRGSQDNQVMILFCKMLNEG 355
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P+ T+S +LKACA L + +H+ K D V+ NAL+ YA GSI ++
Sbjct: 356 IRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEAR 415
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQ 331
FD++ ++VS++ L ++ M + + TF SL+SA + G++
Sbjct: 416 HAFDQLYEKNMVSFSGNLDGDGRSNTYQD--YQIERMELGISTFTFGSLISAAASVGMLT 473
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G ++ H++ G +V + R G +++A ++ EM + + + W+ ++
Sbjct: 474 KGQRL-HALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISG 531
Query: 392 CRKHG 396
KHG
Sbjct: 532 LAKHG 536
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 160/334 (47%), Gaps = 30/334 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK--RNVVSWT 77
+I L H++ D V N L+ +Y+K + AR +FD MP R++VSWT
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 78 ALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC-----DYLHGKLVHALALK 131
A+ S +++G E RLF L+ PN F+L + +C +L G V L K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181
Query: 132 FSL-DAHVYVANALINMYSKSCADEAW-KVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
V V ALI+M++K+ A +VF+ + R V+ W +I + +A+E
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
LF M G PD T S +L AC L + R +HSL + G E
Sbjct: 242 LFLDM-------------LENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLES 288
Query: 250 DTVIANALIHAYARC---GSISLSKQVFDKMTYHDLVSWNSILKAYALHG-QAKEALQLF 305
D+ ++ L+ YA+ S+ +++VF++M H++++W ++L Y G Q + + LF
Sbjct: 289 DSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILF 348
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
M ++P+ T+ S+L AC++ G G ++
Sbjct: 349 CKMLNEGIRPNHITYSSMLKACANLGDQDSGRQI 382
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 42/338 (12%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+++ ACA G+ Q+H H + + N V N L++MYA+ G +++ARH FD+
Sbjct: 363 YSSMLKACANLGDQDSGRQIHTHCVKS--NLADLNVVGNALVSMYAESGSIEEARHAFDQ 420
Query: 68 MPKRNVVSWTALISGYAQHGNAEE--CFRLFCSLLQYFFPNEFSLASVLISCDYL-HGKL 124
+ ++N+VS++ + G + ++ R+ + + F SL S S L G+
Sbjct: 421 LYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFG---SLISAAASVGMLTKGQR 477
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HAL+LK + + N+L++MYS+ C +A +VF+ M NVISW SMI+
Sbjct: 478 LHALSLKAGFGSDRAIGNSLVSMYSR-CGYLVDACQVFDEMNDHNVISWTSMISGLAKHG 536
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE-----RHA 235
A+A+ELF M G+ P+ T+ VL AC AGLV E R
Sbjct: 537 YAARALELFHDMI-------------AAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMM 583
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYAL 294
H LI + E + + L R G + + ++M D + W ++L A
Sbjct: 584 QKHHGLIPR--MEHYACMVDLL----GRSGLVEDALDFINEMPCQVDALVWKTLLGACKT 637
Query: 295 HGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGL 329
H + ++ +N +Q D A +V L + + AGL
Sbjct: 638 HNN-MDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGL 674
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
ST + +L A A G + + +LH + D + N L++MY++ GYL DA
Sbjct: 455 STFTFGSLISAAASVGMLTKGQRLHALSLK--AGFGSDRAIGNSLVSMYSRCGYLVDACQ 512
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHG 122
+FDEM NV+SWT++ISG A+HG A LF ++ PN+ + +VL +C H
Sbjct: 513 VFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACS--HA 570
Query: 123 KLV 125
LV
Sbjct: 571 GLV 573
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYALHGQAKEALQL 304
E D V+AN+L+ Y++C +++ ++ VFD M DLVSW ++ + +G EAL+L
Sbjct: 80 LETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRL 139
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-MVDLL 360
F + P++ T + AC + L ++ G C ++D+
Sbjct: 140 FGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMF 199
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ G ++ ++ + E V+W++L+
Sbjct: 200 AKNGDLVAMRRVFDGL-FERTVVVWTLLI 227
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 332/575 (57%), Gaps = 35/575 (6%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--F 103
N ++++ A G +D A LF+ MP R +VSW A+I+GY Q+G + F +L Y
Sbjct: 232 NAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTM 291
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWK 158
P+EF++ SVL +C L GK VHA L+ + V NALI+MY+KS + E A
Sbjct: 292 APDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARG 351
Query: 159 VFEN--MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------ 198
V + M NVIS+ +++ + A E+F M N +
Sbjct: 352 VMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHND 411
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EA+ LFR + R G P+ T + VL CA L + +H + E + ++N+++
Sbjct: 412 EAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIV 471
Query: 259 HAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
YAR GS+ +++VFD++ + + V+W S++ A A HG ++A+ LF M V+PD
Sbjct: 472 TMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDR 531
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
TFV +LSAC+H G V EG + F + + HG+VP++ HYACMVDLL R G EA++ I+
Sbjct: 532 ITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQ 591
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
+MP+EPD++ W LL +CR H LAELAA KL ++PG+S + +SN+Y G +N
Sbjct: 592 QMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWND 651
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
A I K K V+K G SW I NRVH F + HPQR+ +++ ++ +K G+
Sbjct: 652 AAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGF 711
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
VP+ LHD+++E KEE L HSEKLA+ F +++ E++ +RIMKN+R+C DCH
Sbjct: 712 VPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTP----EKTTLRIMKNLRVCNDCHT 767
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K S + +EI++RD+ RFHHFKD CSC DYW
Sbjct: 768 AIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 196/434 (45%), Gaps = 72/434 (16%)
Query: 29 EHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN 88
+ + P +++F N L+++YAK G L DAR +F EMP+R+ VSWT ++ G + G
Sbjct: 83 RRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGR 142
Query: 89 AEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANA 143
E ++F ++ P +F+L +VL SC G+ VH+ +K L + V VAN+
Sbjct: 143 FGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANS 202
Query: 144 LINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--- 198
++NMY K C D A VFE M R+V SWN+M++ A+ LF M +
Sbjct: 203 VLNMYGK-CGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVS 261
Query: 199 ---------------EALFLF-RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+AL+ F R L MAPD T + VL ACA L VH+ I
Sbjct: 262 WNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYI 321
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQV----------------------------- 273
+ + NALI YA+ GS+ ++ V
Sbjct: 322 LRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKH 381
Query: 274 ----FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
FD M+ D+V+W +++ Y +G EA++LF M +P+S T ++LS C+
Sbjct: 382 AREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCAS 441
Query: 327 AGLVQEGN----KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
++ G K S+ E V +V + R G + A ++ + ++
Sbjct: 442 LACLEYGKQIHCKAIRSLQEQSSSVSN-----SIVTMYARSGSLPWARRVFDRVHWRKET 496
Query: 383 VIWSVLLGSCRKHG 396
V W+ ++ + +HG
Sbjct: 497 VTWTSMIVALAQHG 510
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 152/344 (44%), Gaps = 65/344 (18%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD------EAWKVFENMEF--RNVISWNS 173
G+ +HA A+K L A Y+ N L++ Y+ A EA ++F+ + RNV +WNS
Sbjct: 42 GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101
Query: 174 MIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPD 215
+++ + A A +FA+M + EA+ +F + +G++P
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPT 161
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T + VL +CA VHS + K G +AN++++ Y +CG ++ VF+
Sbjct: 162 QFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFE 221
Query: 276 KMTYHD-------------------------------LVSWNSILKAYALHGQAKEALQL 304
+M +VSWN+++ Y +G +AL
Sbjct: 222 RMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWF 281
Query: 305 FSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA-CMVDL 359
FS M + PD T S+LSAC++ G+V G +V +L + +P + ++ +
Sbjct: 282 FSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSR--MPYIGQVTNALISM 339
Query: 360 LGRVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRKHGETRLAE 402
+ G + A ++++ M +VI ++ LL K G+ + A
Sbjct: 340 YAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAR 383
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A + CA ++ Q+H I + + Q V+N ++ MYA+ G L AR +FD +
Sbjct: 433 AAVLSVCASLACLEYGKQIHCKAIRSL--QEQSSSVSNSIVTMYARSGSLPWARRVFDRV 490
Query: 69 P-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL 120
++ V+WT++I AQHG E+ LF +L+ P+ + VL +C ++
Sbjct: 491 HWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHV 544
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/614 (36%), Positives = 347/614 (56%), Gaps = 47/614 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + ACA ++ QLH +I + P D +V + ++ +YAK G +AR +
Sbjct: 294 STTYTSSLTACAKLSSLGWGKQLHAQVIRSLP--CIDPYVASAMVELYAKCGCFKEARRV 351
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DY 119
F + RN VSWT LI G+ Q+G E LF + + ++F+LA+++ C D
Sbjct: 352 FSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDM 411
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
+ +H+L+LK V ++N+LI+MY+K C + A +F +ME R+++SW M+ A
Sbjct: 412 CLARQLHSLSLKSGHTRAVVISNSLISMYAK-CGNLQNAESIFSSMEERDIVSWTGMLTA 470
Query: 178 FRACKLEAQAIELFAKMKN------------------EEEALFLFR-QLQREGMAPDWCT 218
+ +A E F M EE+ L ++ L + + PDW T
Sbjct: 471 YSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVT 530
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+ + + CA + + + K G DT + NA+I Y++CG IS ++++FD ++
Sbjct: 531 YVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS 590
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
DLVSWN+++ Y+ HG K+A+++F +M +PD ++V++LS+CSH+GLVQEG
Sbjct: 591 RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKF 650
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F + +H V P L+H++CMVDLL R G ++EA+ LI EMPM+P + +W LL +C+ H
Sbjct: 651 YFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTH 710
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
G LAELAA L L+ DS G++ ++ IY +G + +RK M+ ++K PG SW
Sbjct: 711 GNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSW 770
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
+E++N+VH F + HPQ AI +KL+EL+ ++ +GYV SL
Sbjct: 771 MEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESL-----------RSEI 819
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HHSEKLA+ F IMN + I IMKN+RIC DCH +KL S + G+E V+RD+ RF
Sbjct: 820 HHSEKLAVAFGIMNLPAWMP----IHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRF 875
Query: 576 HHFKDRICSCNDYW 589
HHFK CSC DYW
Sbjct: 876 HHFKGGSCSCGDYW 889
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 179/408 (43%), Gaps = 35/408 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL HA G + A L I EP ++ N ++N YAK G L DA LF MP
Sbjct: 68 TLLHAYLSCGALPDARGLLRGDIT----EP-NVITHNIMMNGYAKLGSLSDAEELFGRMP 122
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL--HGKLV 125
+R+V SW L+SGY Q G + F S+ + PN F+ + SC L H +
Sbjct: 123 RRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVAL 182
Query: 126 HALAL--KFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
L L KF VA +++M+ + A D A K F +E V NSM+A +
Sbjct: 183 QLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSY 242
Query: 183 LEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLK 224
A+ELF M + EAL + + G+ D T++ L
Sbjct: 243 GVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLT 302
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA L + +H+ + + D +A+A++ YA+CG +++VF + + VS
Sbjct: 303 ACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVS 362
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W ++ + +G E+L+LF+ M + D +++S CS+ + + HS+
Sbjct: 363 WTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNR-MDMCLARQLHSLS 421
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
G + ++ + + G + AE + M E D V W+ +L
Sbjct: 422 LKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSME-ERDIVSWTGML 468
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC------------------ 264
L++C A A+H + G + N L+HAY C
Sbjct: 35 LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94
Query: 265 --------------GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
GS+S ++++F +M D+ SWN+++ Y G+ +A++ F +M
Sbjct: 95 VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ P++ TF + +C G + ++ +L G D +VD+ R G +
Sbjct: 155 SGDSLPNAFTFGCAMKSCGALGWHEVALQLL-GLLTKFGFQGDPDVATGIVDMFVRCGAV 213
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
A K ++ S+L G + +G EL + + D + + M +
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALEL----FESMPERDVVSWNMMVSAL 269
Query: 427 CLSGSFNKARLIRKEMKGSRVR 448
SG +A + +M VR
Sbjct: 270 SQSGRAREALSVAVDMHNRGVR 291
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/618 (37%), Positives = 349/618 (56%), Gaps = 41/618 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L + + LF LHG + L D FV L++MYA G ++
Sbjct: 120 ILKAVSKVSALFEGMELHGFAFKIATL------------SDPFVETGLMDMYAACGRINY 167
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC-- 117
AR++FDEM +R+VV+W +I Y + G +E F+LF + P+E L +++ +C
Sbjct: 168 ARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 227
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSM 174
+ + + ++ ++ + ++ AL+ MY+ + C D A + F M RN+ +M
Sbjct: 228 TGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAM 287
Query: 175 IAAF-RACKLE-----------------AQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
++ + +A +L+ I +A+ + +EAL +F ++ G+ PD
Sbjct: 288 VSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDV 347
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T V+ AC L T A VH G E I NALI+ YA+CG + ++ VF+K
Sbjct: 348 VTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEK 407
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M ++VSW+S++ A+A+HG+A ++L LF+ M NV+P+ TFV +L CSH+GLV+EG
Sbjct: 408 MPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEG 467
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K+F SM + + + P+++HY CMVDL GR + EA ++I MPM P+ VIW L+ +CR
Sbjct: 468 KKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACR 527
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
HGE L ELAA ++ +LEP V MSNIY ++ R+IR M+ +V K GL
Sbjct: 528 VHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGL 587
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S I++ + HEF G KRH Q I+ KL E++ +LK GYVP+ L D+EEE K++
Sbjct: 588 SRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDL 647
Query: 514 LYHHSEKLALVFAIMNQGSLCRERS--VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ HSEKLAL F +MN+ + S VIRI+KN+R+C DCH F KL S + EI+VRD
Sbjct: 648 VLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRD 707
Query: 572 SNRFHHFKDRICSCNDYW 589
RFH +KD +CSC DYW
Sbjct: 708 RTRFHRYKDGLCSCRDYW 725
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 196 NEEEALFLFRQLQRE-GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
E A LF Q R G D +F +LKA + + +H K D +
Sbjct: 93 GEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVE 152
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
L+ YA CG I+ ++ VFD+M+ D+V+WN++++ Y G EA +LF M NV
Sbjct: 153 TGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVM 212
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
PD +++SAC G ++ ++ ++EN
Sbjct: 213 PDEMILCNIVSACGRTGNMRYNRAIYDFLIEN 244
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/590 (38%), Positives = 342/590 (57%), Gaps = 28/590 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G +K QLH ++ EP D FV LI+MY+K G L DAR +FD M
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMK-MDMEP-DSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG----K 123
P ++V+ W ++ISGY+ G E LF ++ + N+ +L+++L S +
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE 410
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
VH +++K YVAN+L++ Y K C ++A KVFE +++++ SMI A+
Sbjct: 411 QVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG 470
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
L EEAL ++ ++Q + PD FS + ACA L +H +
Sbjct: 471 LG-------------EEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHV 517
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K G D N+L++ YA+CGSI + +F+++++ +VSW++++ A HG ++AL
Sbjct: 518 LKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKAL 577
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
QLF M + P+ T VS+LSAC+HAGLV E + F M + G+ P +HYACMVD+
Sbjct: 578 QLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDI 637
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGRVGR+ EA L++EMP + + +W LLG+ R H L AA L LEP S
Sbjct: 638 LGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTH 697
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
+ ++NIY +G ++ +R+ MK S V+K PG+SWIE++++V+ F G + HP+ + I+
Sbjct: 698 ILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIY 757
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
KL++L +L GYVP LHD+E+ KE+ L+HHSEKLA+ F ++ +
Sbjct: 758 VKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIAT----PPGAP 813
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C+DCH K S + +EI+VRD NRFHHF+D CSC DYW
Sbjct: 814 IRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 215/482 (44%), Gaps = 106/482 (21%)
Query: 49 INMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF------------ 96
+N+Y+K AR L + + ++VSW+ALISGY Q+G EE +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 97 ---------CSLLQYF--------------------FPNEFSLASVLISC----DYLHGK 123
CSL + PNEFSL++VL +C D +G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 124 LVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACK 182
VH +K D+ + ANAL++MY+KS C + A VF + +++SWN++IA +
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A++L KM + +R +AP T S LKACA + + +HS +
Sbjct: 269 KNDLALKLLGKMGS-------YR------VAPSMFTLSSALKACAAIGLVKLGRQLHSAL 315
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K E D+ + LI Y++CG + ++ VFD M D++ WNSI+ Y+ G EA+
Sbjct: 316 MKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAM 375
Query: 303 QLFSNM---NVQPDSATFVSLLSACS-----------HAGLVQEGNK----VFHSMLENH 344
LF+NM ++ + T ++L + + H ++ G + V +S+L+++
Sbjct: 376 SLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSY 435
Query: 345 G-------------VVPQLD--HYACMVDLLGRVGRILEAEKL---IREMPMEPDSVIWS 386
G V P D Y M+ + G EA K+ +++ ++PD+ I+S
Sbjct: 436 GKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFS 495
Query: 387 VLLGSC------RKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRK 440
L +C + + + L L + G+SL N+Y GS + A I
Sbjct: 496 SLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSL-----VNMYAKCGSIDDASCIFN 550
Query: 441 EM 442
E+
Sbjct: 551 EI 552
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I+++LF+ACA +Q Q+H H++ D+F N L+NMYAK G +DDA +F+
Sbjct: 493 IFSSLFNACANLSAYEQGKQIHVHVLKC--GLLSDVFAGNSLVNMYAKCGSIDDASCIFN 550
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLV 125
E+ R +VSW+A+I G AQHG+ + +LF +L+ PN +L SVL +C+ H LV
Sbjct: 551 EISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACN--HAGLV 608
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA----------DEAWKVFENMEFR-NVISWNSM 174
F L ++ Y +C DEA + + M F+ + W ++
Sbjct: 609 TEARRFFGLMEKLFGITPTQEHY--ACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGAL 666
Query: 175 IAAFRACK---LEAQAIELFAKMKNEEEA 200
+ A R K L A E+ ++ E+
Sbjct: 667 LGAARIHKNIELGRHAAEMLLTLEPEKSG 695
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/599 (38%), Positives = 341/599 (56%), Gaps = 30/599 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
FL + + ACA +++ +++H ++ D+FV L+++Y K DD
Sbjct: 110 FLPNNFTIPFVLKACARKLDVRLGLKIHSLLVK--AGYDHDVFVKTSLLSLYVKCDNFDD 167
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC-- 117
A +FD++P +NVVSWTA+I+GY G+ E F LL+ P+ FSL VL +C
Sbjct: 168 ALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACAR 227
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
D G+ + + +V+VA +L++MY K C + A +F M ++++SW++
Sbjct: 228 LGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVK-CGNLERANLIFSAMPEKDIVSWST 286
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI + L QA++LF Q+Q E + PD T VL ACA L
Sbjct: 287 MIQGYAFNGLPQQALDLFF-------------QMQSENLKPDCYTMVGVLSACATLGALD 333
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
SL+ + F + V+ ALI Y++CGS++ + ++F M D V WN+++ +
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLS 393
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
++G AK LFS + ++PD TF+ LL C+H G V EG + F++M + P +
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSI 453
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HY CMVDLLGR G + EA +LI MPM+P++V+W LLG C+ H +T LAE KL +
Sbjct: 454 EHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP +S +VQ+SNIY + + +A IR MK +++K SWIEI+ VHEF G K
Sbjct: 514 LEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDK 573
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
H E I+ KL+EL +LK +G+VP T L DIEEE KE L +HSEKLA+ F ++
Sbjct: 574 SHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIAS 633
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
VIR++KN+R+C DCH+ +KL S + +EI++RD+NRFH F D CSC DYW
Sbjct: 634 ----PPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 183/369 (49%), Gaps = 24/369 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
QD ++ N ++ FG + ++ +F ++ + N+ W +I G ++ L+ S+
Sbjct: 46 QDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSM 105
Query: 100 L-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
F PN F++ VL +C D G +H+L +K D V+V +L+++Y K
Sbjct: 106 RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNF 165
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+A KVF+++ +NV+SW ++I + + + EA+ F++L G+
Sbjct: 166 DDALKVFDDIPDKNVVSWTAIITGYISS-------------GHFREAIGAFKKLLEMGLK 212
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD + VL ACA L + I+ G + +A +L+ Y +CG++ + +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F M D+VSW+++++ YA +G ++AL LF M N++PD T V +LSAC+ G +
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G S+++ + + ++D+ + G + +A ++ M + D V+W+ ++
Sbjct: 333 DLGIWA-SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRK-DRVVWNAMMV 390
Query: 391 SCRKHGETR 399
+G +
Sbjct: 391 GLSMNGHAK 399
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 125/278 (44%), Gaps = 33/278 (11%)
Query: 123 KLVHALALKFSLDAHVYVANALI--------NMYSKSCADEAWKVFENMEFRNVISWNSM 174
K +HA L+ LD Y+ N ++ YSK VF ++ N+ WN+M
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSK-------LVFSQVKEPNIFLWNTM 85
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I + AI L+ M+ G P+ T VLKACA + R
Sbjct: 86 IRGLVSKDCFDDAIHLYGSMRGG-------------GFLPNNFTIPFVLKACARKLDVRL 132
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+HSL+ K G++ D + +L+ Y +C + + +VFD + ++VSW +I+ Y
Sbjct: 133 GLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYIS 192
Query: 295 HGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G +EA+ F M ++PDS + V +L+AC+ G G + + + G+ +
Sbjct: 193 SGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWI-DRYISDSGMGRNVF 251
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ + G + A + MP E D V WS ++
Sbjct: 252 VATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMI 288
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/599 (38%), Positives = 341/599 (56%), Gaps = 30/599 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
FL + + ACA +++ +++H ++ D+FV L+++Y K DD
Sbjct: 110 FLPNNFTIPFVLKACARKLDVRLGLKIHSLLVK--AGYDHDVFVKTSLLSLYVKCDNFDD 167
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC-- 117
A +FD++P +NVVSWTA+I+GY G+ E F LL+ P+ FSL VL +C
Sbjct: 168 ALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACAR 227
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
D G+ + + +V+VA +L++MY K C + A +F M ++++SW++
Sbjct: 228 LGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVK-CGNLERANLIFSAMPEKDIVSWST 286
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI + L QA++LF Q+Q E + PD T VL ACA L
Sbjct: 287 MIQGYAFNGLPQQALDLFF-------------QMQSENLKPDCYTMVGVLSACATLGALD 333
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
SL+ + F + V+ ALI Y++CGS++ + ++F M D V WN+++ +
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLS 393
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
++G AK LFS + ++PD TF+ LL C+H G V EG + F++M + P +
Sbjct: 394 MNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSI 453
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HY CMVDLLGR G + EA +LI MPM+P++V+W LLG C+ H +T LAE KL +
Sbjct: 454 EHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP +S +VQ+SNIY + + +A IR MK +++K SWIEI+ VHEF G K
Sbjct: 514 LEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDK 573
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
H E I+ KL+EL +LK +G+VP T L DIEEE KE L +HSEKLA+ F ++
Sbjct: 574 SHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIAS 633
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
VIR++KN+R+C DCH+ +KL S + +EI++RD+NRFH F D CSC DYW
Sbjct: 634 ----PPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 183/369 (49%), Gaps = 24/369 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
QD ++ N ++ FG + ++ +F ++ + N+ W +I G ++ L+ S+
Sbjct: 46 QDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSM 105
Query: 100 L-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
F PN F++ VL +C D G +H+L +K D V+V +L+++Y K
Sbjct: 106 RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNF 165
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+A KVF+++ +NV+SW ++I + + + EA+ F++L G+
Sbjct: 166 DDALKVFDDIPDKNVVSWTAIITGYISS-------------GHFREAIGAFKKLLEMGLK 212
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD + VL ACA L + I+ G + +A +L+ Y +CG++ + +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F M D+VSW+++++ YA +G ++AL LF M N++PD T V +LSAC+ G +
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G S+++ + + ++D+ + G + +A ++ M + D V+W+ ++
Sbjct: 333 DLGIWA-SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMMV 390
Query: 391 SCRKHGETR 399
+G +
Sbjct: 391 GLSMNGHAK 399
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 125/278 (44%), Gaps = 33/278 (11%)
Query: 123 KLVHALALKFSLDAHVYVANALI--------NMYSKSCADEAWKVFENMEFRNVISWNSM 174
K +HA L+ LD Y+ N ++ YSK VF ++ N+ WN+M
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSK-------LVFSQVKEPNIFLWNTM 85
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I + AI L+ M+ G P+ T VLKACA + R
Sbjct: 86 IRGLVSKDCFDDAIHLYGSMRGG-------------GFLPNNFTIPFVLKACARKLDVRL 132
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+HSL+ K G++ D + +L+ Y +C + + +VFD + ++VSW +I+ Y
Sbjct: 133 GLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYIS 192
Query: 295 HGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G +EA+ F M ++PDS + V +L+AC+ G G + + + G+ +
Sbjct: 193 SGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWI-DRYISDSGMGRNVF 251
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ + G + A + MP E D V WS ++
Sbjct: 252 VATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMI 288
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/606 (38%), Positives = 342/606 (56%), Gaps = 68/606 (11%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PN 106
L+ YA G RH+FDE+PK+NVV + +I Y + + +F ++ + P+
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 107 EFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
++ VL S D G +HA ++ LD +V+V N LI+MY K C EA +V +
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 162 NMEFRNVISWNSMIA----------AFRACK------LEAQA------------------ 187
M R+V+SWNS++A A CK L+ A
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNV 1245
Query: 188 ---IELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKAC 226
E+F K+ N+ EA+ +F Q++ + PD + + VL AC
Sbjct: 1246 SFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 1305
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
L +H + + + + ++ NALI YA+CG + +++VFD+M + D+VSW
Sbjct: 1306 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWT 1365
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
S++ AY ++G+ ++A+ LFS M + PDS FVS+LSACSHAGL+ EG F M E
Sbjct: 1366 SMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE 1425
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL 403
+VP+++H+ CMVDLLGR G++ EA I++MPMEP+ +W LL +CR + + L
Sbjct: 1426 CKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLL 1485
Query: 404 AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVH 463
AA +L QL P S +V +SNIY +G + +R MK ++K PG+S E++NRVH
Sbjct: 1486 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVH 1545
Query: 464 EFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLAL 523
F +G + HPQ + I+++L+ L+G++K GYVPET ALHD+EEE KE L HSEKLA+
Sbjct: 1546 TFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAI 1605
Query: 524 VFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRIC 583
FAI+N S IRI KN+R+C DCH KL S ++G+EI +RD+NRFHHF + +C
Sbjct: 1606 AFAILNTAP----GSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVC 1661
Query: 584 SCNDYW 589
SC DYW
Sbjct: 1662 SCGDYW 1667
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 135 DAHVYVANALINMYSKSCADEAWK---VFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
D H + + M + + E W +F+ + +NV+ +N MI ++ L +
Sbjct: 1055 DLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYS------ 1108
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+AL +F+ + G+ PD T+ VLKA +G +H+ + + G + +
Sbjct: 1109 -------DALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNV 1161
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ N LI Y +CG + + +V D+M D+VSWNS++ A +GQ +AL++ M
Sbjct: 1162 FVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELL 1221
Query: 309 NVQPDSATFVSLLSACSHAGL 329
++PD+ T SLL A ++ L
Sbjct: 1222 GLKPDAGTMASLLPAVTNTCL 1242
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNF--PNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
A++ AC + ++HE+++ PN L + N LI+MYAK G L+ AR +FD
Sbjct: 1299 ASVLPACGDLSALLLGRRIHEYVVRKRLQPN----LLLENALIDMYAKCGCLEYAREVFD 1354
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
+M R+VVSWT++IS Y +G + LF + P+ + SVL +C +
Sbjct: 1355 QMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 1408
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/559 (39%), Positives = 337/559 (60%), Gaps = 27/559 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V N +NM+ G L DAR LF++M R+VV+W +I+ Y Q+ N E RLF L
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300
Query: 101 QYFF-PNEFS---LASVLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
Q N+ + + +V S L GK++H L + D V VA AL+++Y +
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPG 360
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+AWK+F +M ++VI+W M A+ A+ +EAL LF+++Q EG P
Sbjct: 361 QAWKIFVDMGSKDVITWTVMCVAY-------------AQNGFRKEALQLFQEMQLEGRRP 407
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T VL CA L + +HS I + GF + V+ ALI+ Y +CG ++ ++ VF
Sbjct: 408 TSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVF 467
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQ 331
+KM D++ WNS+L AYA HG E LQLF+ M + + D+ +FVS+LSA SH+G V
Sbjct: 468 EKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVT 527
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP-MEPDSVIWSVLLG 390
+G + F +ML++ + P + Y C+VDLLGR GRI EA ++ ++ PD ++W LLG
Sbjct: 528 DGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLG 587
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR H +T A+ AA ++ + +P S +V +SN+Y +G ++ +RK M+ V+K
Sbjct: 588 ACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKE 647
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IEI NRVHEF G + HP+R I+ +L+ L +++ GY+P+T + LHD+E+E K
Sbjct: 648 PGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERK 707
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E+ L++HSE+LA+ F +M+ + +R++KN+R+C DCH K S L G+EI+VR
Sbjct: 708 EDMLFYHSERLAIAFGLMSTPP----GTPLRVIKNLRVCSDCHTATKYISKLRGREILVR 763
Query: 571 DSNRFHHFKDRICSCNDYW 589
D++RFH+FKD CSC DYW
Sbjct: 764 DTHRFHNFKDGRCSCKDYW 782
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 195/405 (48%), Gaps = 26/405 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F T + L C+ N+ ++H H+ + Q+ V HLI MYA+ G + +
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDR--GFEQNNLVCGHLIQMYAQCGSVPE 58
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY 119
A+ +F+ + +++V +WT +I Y Q G+ + +F + + P + + ++L +C
Sbjct: 59 AQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAS 118
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
G +H L+ + V+V ALINMY+K AW F+ +E R+V+SW +M
Sbjct: 119 TESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAM 178
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
IA AC Q FA A +L+R++Q +G+ P+ T V A
Sbjct: 179 IA---ACVQHDQ----FAL------ARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSE 225
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
++SL++ E D + N+ ++ + G + ++++F+ M D+V+WN ++ Y
Sbjct: 226 GKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQ 285
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+ EA++LF + ++ + TFV +L+ + + +G KV H +++ G +
Sbjct: 286 NENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDVV 344
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ L GR +A K+ +M D + W+V+ + ++G
Sbjct: 345 VATALMSLYGRCEAPGQAWKIFVDMG-SKDVITWTVMCVAYAQNG 388
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 24/350 (6%)
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
F P+ ++L C + HG+ VH + + V LI MY++ EA
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+VFE +E ++V +W MI ++ + + + AL +F Q+Q E + P
Sbjct: 61 QVFEILERKDVFAWTRMIG-------------IYCQQGDYDRALGMFYQMQEEDVMPTKV 107
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+ +L ACA + + +H I + GFE D + ALI+ Y +CGS+ + F ++
Sbjct: 108 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 167
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ D+VSW +++ A H Q A L+ M V P+ T ++ +A + EG
Sbjct: 168 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEG- 226
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
K +S++ + + + +++ G G + +A +L +M ++ D V W++++ +
Sbjct: 227 KFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITFYVQ 285
Query: 395 HGETRLAELAATKLKQLE-PGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ A +L+Q + + FV M N+Y S K ++I + +K
Sbjct: 286 NENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVK 335
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 159/346 (45%), Gaps = 33/346 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ V L+++Y + A +F +M ++V++WT + YAQ+G +E +LF +
Sbjct: 341 RDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM 400
Query: 100 -LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
L+ P +L +VL +C +L G+ +H+ ++ + V ALINMY K C
Sbjct: 401 QLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGK-CGK 459
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
EA VFE M R+++ WNSM+ A +A+ +E L LF Q+Q +G
Sbjct: 460 MAEARSVFEKMAKRDILVWNSMLGA-------------YAQHGYYDETLQLFNQMQLDGE 506
Query: 213 APDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
D +F VL A +G VT+ + V +++ + + ++ R G I +
Sbjct: 507 KADAVSFVSVLSALSHSGSVTDGYQYFV-AMLQDFSITPTPELYGCVVDLLGRAGRIQEA 565
Query: 271 KQVFDKMT--YHDLVSWNSILKAYALHG---QAKEALQLFSNMNVQPDSATFVSLLSACS 325
+ K++ D + W ++L A H QAK A + + P + +LS
Sbjct: 566 VDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQV--LERDPSHSGAYVVLSNVY 623
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
A +G ++ + GV + + +++L RV LE ++
Sbjct: 624 AAAGDWDGVNRMRKLMRSRGVKKEPGRSS--IEILNRVHEFLEGDR 667
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
++ + CA +++ Q+H H+I N ++ V LINMY K G + +AR
Sbjct: 408 TSATLVAVLDTCAHLAALQKGRQIHSHIIEN--GFRMEMVVETALINMYGKCGKMAEARS 465
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
+F++M KR+++ W +++ YAQHG +E +LF
Sbjct: 466 VFEKMAKRDILVWNSMLGAYAQHGYYDETLQLF 498
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/556 (39%), Positives = 330/556 (59%), Gaps = 26/556 (4%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
FV N LI+MYA G ++ AR +FDEM +RNV +W ++ +GY + GN EE +LF +L+
Sbjct: 160 FVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLEL 219
Query: 103 FFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
+E +L SVL +C L G+ ++ + L + + +L++MY+K D A
Sbjct: 220 DIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTA 279
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
++F+ M+ R+V++W++MI+ + ++ EAL LF ++Q+ + P+
Sbjct: 280 RRLFDQMDRRDVVAWSAMISGY-------------SQASRCREALDLFHEMQKANIDPNE 326
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T +L +CA L VH I K + + AL+ YA+CGS+ S +VF K
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGK 386
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M +++SW +++ A +GQ K+AL+ F M NV+P+ TF+ +LSACSHAGLV EG
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEG 446
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+F SM + G+ P+++HY CMVD+LGR G I EA + I+ MP++P++VIW LL SC+
Sbjct: 447 RDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCK 506
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H + E + +L LEP S ++ +SNIY G + A +R EMK ++K PG
Sbjct: 507 VHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGC 566
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S IE++ +HEF + H Q E I+ +E+++ Q+K GYVP T+ A D EE+ KE
Sbjct: 567 SLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESS 626
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
+ HHSEKLA+ F ++ + IRI KN+R+C DCHN KL S + +EIVVRD
Sbjct: 627 VSHHSEKLAIAFGLIKSPP----GTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRT 682
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFK+ CSCNDYW
Sbjct: 683 RFHHFKEGSCSCNDYW 698
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 183/369 (49%), Gaps = 26/369 (7%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLIS 116
+D A +F ++ + + ++ +I G+ + E LF + + P+EF+ +L
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 117 CDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISW 171
C L G+ +HAL +K +H +V N LI+MY+ E A +VF+ M RNV +W
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
NSM A + K N EE + LF ++ + D T VL AC L
Sbjct: 194 NSMFAG-------------YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLAD 240
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
++ + + G + + + +L+ YA+CG + ++++FD+M D+V+W++++
Sbjct: 241 LELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISG 300
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
Y+ + +EAL LF M N+ P+ T VS+LS+C+ G ++ G K H ++ +
Sbjct: 301 YSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETG-KWVHFFIKKKRMKL 359
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATK 407
+ ++D + G + + ++ +MP++ + + W+VL+ +G+ + A E
Sbjct: 360 TVTLGTALMDFYAKCGSVESSIEVFGKMPVK-NVLSWTVLIQGLASNGQGKKALEYFYLM 418
Query: 408 L-KQLEPGD 415
L K +EP D
Sbjct: 419 LEKNVEPND 427
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 133/283 (46%), Gaps = 21/283 (7%)
Query: 125 VHALALKFSLDAHVYVANALINMYS---KSCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HA +K L VA L+ + + D A +F ++ + ++N MI F
Sbjct: 43 IHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL- 101
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ EA+ LF+++ + PD TF +LK C+ L +H+L
Sbjct: 102 ------------KQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHAL 149
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K GF + N LIH YA CG + ++++VFD+M+ ++ +WNS+ Y G +E
Sbjct: 150 IMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEV 209
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M +++ D T VS+L+AC ++ G + + +E G+ +VD
Sbjct: 210 VKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWI-NRYVEEKGLKGNPTLITSLVD 268
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + G++ A +L +M D V WS ++ + R A
Sbjct: 269 MYAKCGQVDTARRLFDQMDRR-DVVAWSAMISGYSQASRCREA 310
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/579 (39%), Positives = 336/579 (58%), Gaps = 49/579 (8%)
Query: 41 DLFVTNHLINMYAKF--GYLDDA-----------------RHLFDEMPKRNVVSWTALIS 81
D F N L+N+Y K YLD R +FDEM +R+VVSW L+
Sbjct: 84 DRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVL 143
Query: 82 GYAQHGNAEECF---RLFCSLLQYFFPNEFSLASVLI----SCDYLHGKLVHALALKFSL 134
G A+ G E R C + F P+ F+L++VL D G VH A +
Sbjct: 144 GCAEEGRHHEALGFVRKMCR--EGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGF 201
Query: 135 DAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
D+ V+V ++LI+MY+ D + KVF+N+ R+ I WNS++A C A+
Sbjct: 202 DSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAG---C----------AQ 248
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+ EEAL +FR++ + G+ P TFS ++ C L + R +H+ + GFED+ I
Sbjct: 249 NGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFI 308
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
+++LI Y +CG IS++ +FDKM+ D+VSW +++ YALHG A+EAL LF M N
Sbjct: 309 SSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNA 368
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+P+ TF+++L+ACSHAGLV +G K F SM ++G+VP L+H+A + D LGR G + EA
Sbjct: 369 KPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAY 428
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
I +M ++P + +WS LL +CR H T LAE A K+ +LEP V +SN+Y SG
Sbjct: 429 NFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASG 488
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+N+A +R+ M+ ++K P SWIE+++++H F + + HP + I L Q+
Sbjct: 489 RWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMA 548
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
G+VP T DIEEEHK L HSEKLA+VF I++ + + IR+MKN+R+C+
Sbjct: 549 REGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTK----IRVMKNLRVCI 604
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH K S L +EIVVRD+NRFHHFKD CSC D+W
Sbjct: 605 DCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 154/356 (43%), Gaps = 45/356 (12%)
Query: 76 WTALISGYAQHGNAEECFRLFCSLLQYFFPNE---FSLASVLISCDYLH----GKLVHAL 128
W I A G+ + LF + P SL + L SC L G +HAL
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 129 ALKFSLDAHVYVANALINMYSK-SCA-------------------DEAWKVFENMEFRNV 168
A++ A + ANAL+N+Y K C+ + KVF+ M R+V
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SWN+++ C E + EAL R++ REG PD T S VL A
Sbjct: 136 VSWNTLVL---GCAEEGR----------HHEALGFVRKMCREGFRPDSFTLSTVLPIFAE 182
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ VH + GF+ D + ++LI YA C S +VFD + D + WNS+
Sbjct: 183 CADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSL 242
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
L A +G +EAL +F M V+P TF SL+ C + ++ G K H+ + G
Sbjct: 243 LAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFG-KQLHAYVICGG 301
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + ++D+ + G I A + +M PD V W+ ++ HG R A
Sbjct: 302 FEDNVFISSSLIDMYCKCGEISIAHCIFDKMS-SPDVVSWTAMIMGYALHGPAREA 356
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/591 (37%), Positives = 339/591 (57%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ C ++ Q+H + + D+ + N LINMY + G L DAR++F
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITES--GLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HG 122
+ R+V+SWTA+I G A G + LF + + F P + + +S+L C G
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEG 652
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
K V A L + V NALI+ YSKS + +A +VF+ M R+++SWN +IA +
Sbjct: 653 KKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQN 712
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L A+E F + Q+Q + + P+ +F +L AC+ VH+
Sbjct: 713 GLGQTAVE------------FAY-QMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAE 759
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K + D + ALI YA+CGS +++VFD + ++V+WN+++ AYA HG A +A
Sbjct: 760 IVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKA 819
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L F+ M ++PD +TF S+LSAC+HAGLV EG ++F SM +GV+P ++HY C+V
Sbjct: 820 LGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVG 879
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR R EAE LI +MP PD+ +W LLG+CR HG LAE AA +L +
Sbjct: 880 LLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAV 939
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ +SN+Y +G ++ IR+ M+G +RK PG SWIE++N +HEF + + HP+ I
Sbjct: 940 YILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEI 999
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +L+ L +++ GY P+T LHD+ + H+E L HSE+LA+ + ++ +
Sbjct: 1000 YAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIK----TPPGT 1055
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+RIC DCH K S L+G+EI+ RDSNRFH FK+ CSC DYW
Sbjct: 1056 PIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 229/454 (50%), Gaps = 36/454 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ +AC+ ++ +H H+ + D+ + N LI+MYA+ G L AR LF
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISED--GHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHG 122
MPKR+++SW A+I+GYA+ + E RL+ + + P + +L +C Y G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K++H L+ + ++ ++ANAL+NMY + C EA VFE + R+VISWNSMIA
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRR-CGSLMEAQNVFEGTQARDVISWNSMIAGH-- 507
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ + E A LF+++Q E + PD TF+ VL C +H
Sbjct: 508 -----------AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I + G + D + NALI+ Y RCGS+ ++ VF + + D++SW +++ A G+ +
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616
Query: 301 ALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A++LF N +P +TF S+L C+ + + EG KV +L N G ++
Sbjct: 617 AIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYIL-NSGYELDTGVGNALI 675
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDS 416
+ G + +A ++ +MP D V W+ ++ ++G + A E A +Q +
Sbjct: 676 SAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNK 734
Query: 417 LGFVQMSNIYCLS------GSFNKARLIRKEMKG 444
FV + N C S G A +++++++G
Sbjct: 735 FSFVSLLNA-CSSFSALEEGKRVHAEIVKRKLQG 767
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 226/455 (49%), Gaps = 35/455 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L C + +A ++H M+ + D+F++N LINMY K + DA +F E
Sbjct: 30 YVALLQNCTRKRLLPEAKRIHAQMVEAWVGP--DIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
MP+R+V+SW +LIS YAQ G ++ F+LF + F PN+ + S+L +C + +G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K +H+ +K V N+L++MY K C D A +VF + R+V+S+N+M+
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGK-CGDLPRARQVFAGISPRDVVSYNTMLG---- 202
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L+A+ +E L LF Q+ EG++PD T+ +L A +H
Sbjct: 203 ---------LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L + G D + AL+ RCG + +KQ F D+V +N+++ A A HG E
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVE 313
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A + + M V + T++S+L+ACS + ++ G K+ HS + G + ++
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALI 372
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIW-SVLLGSCRKHGETRLAELAATKLKQLE---P 413
+ R G + +A +L MP + D + W +++ G R+ E R + K Q E P
Sbjct: 373 SMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARR--EDRGEAMRLYKQMQSEGVKP 429
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
G + F+ + + S ++ ++I +++ S ++
Sbjct: 430 G-RVTFLHLLSACANSSAYADGKMIHEDILRSGIK 463
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 201/400 (50%), Gaps = 28/400 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L A + + ++H+ + N D+ V L+ M + G +D A+ F
Sbjct: 232 YINLLDAFTTPSMLDEGKRIHKLTVEEGLN--SDIRVGTALVTMCVRCGDVDSAKQAFKG 289
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----G 122
R+VV + ALI+ AQHG+ E F + + N + S+L +C G
Sbjct: 290 TADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG 349
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
KL+H+ + + V + NALI+MY++ C D +A ++F M R++ISWN++IA +
Sbjct: 350 KLIHSHISEDGHSSDVQIGNALISMYAR-CGDLPKARELFYTMPKRDLISWNAIIAGY-- 406
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ ++ EA+ L++Q+Q EG+ P TF +L ACA +H
Sbjct: 407 -----------ARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I + G + + +ANAL++ Y RCGS+ ++ VF+ D++SWNS++ +A HG +
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 301 ALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A +LF M ++PD+ TF S+LS C + ++ G ++ H + G+ ++ ++
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI-HGRITESGLQLDVNLGNALI 574
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
++ R G + +A + + D + W+ ++G C GE
Sbjct: 575 NMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGCADQGE 613
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+ +L+ C A +H+ + + D ++N LI+ Y +C S+ + QVF +M
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGN 334
D++SWNS++ YA G K+A QLF N P+ T++S+L+AC ++ G
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
K+ HS + G ++ + G+ G + A ++ + D V ++ +LG
Sbjct: 149 KI-HSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR-DVVSYNTMLG 202
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 355/589 (60%), Gaps = 27/589 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ + + +++H+ ++ F + Q +F++N LI MY K + +R +FDE
Sbjct: 13 FPFIIKACSCLRHFEFGIRIHQDVVK-FGYQSQ-VFISNSLITMYGKCDKYELSRQVFDE 70
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKL-- 124
MP +N VSW+A+I Q +E F LF +L + P+ ++ + + +C H +
Sbjct: 71 MPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-ACVRSHEEADD 129
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKL 183
V+ + ++ LD V +A M+++ E A K+F+ + +++++W
Sbjct: 130 VYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW------------ 177
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
A IE + K EAL L +Q+ +G+ PD T V++AC+ L + + A VH +I
Sbjct: 178 -ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIIT 236
Query: 244 KYGFEDDTV-IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
F + + + ALI Y +CGS++ +++VFD M ++++W++++ Y +HG +EAL
Sbjct: 237 TGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREAL 296
Query: 303 QLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M +V+PD TFVS+LSACSH+GLV EG + F+SM + GV P+ +HYACMVD+L
Sbjct: 297 NLFDQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDIL 356
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR G++ EA I MP+ P++ +W LLG+CR H LAE+ A L L+P ++ +V
Sbjct: 357 GRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYV 416
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+ NIY L+G +A IR MK V+K G S IEI+N+++ F +G + HPQ + I+
Sbjct: 417 ILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYS 476
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
+LE L+ +++ GY P+ + LHD++EE KE LY HSEKLA+VF ++N G SVI
Sbjct: 477 ELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGP----GSVI 532
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RI KN+R+C DCH K S + G+EIVVRD++RFHHFK+ CSC DYW
Sbjct: 533 RIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R G+ PD TF ++KAC+ L +H + K+G++ I+N+LI Y +C
Sbjct: 3 RLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYE 62
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAG 328
LS+QVFD+M + VSW++I+ A + KE LF M + + ++L+A +
Sbjct: 63 LSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVR 122
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+E + V+ ++EN G+ + + R GR+ A KL + M D V W+
Sbjct: 123 SHEEADDVYRVVVEN-GLDFDQSVQSAAAGMFARCGRVEVARKLFDGI-MSKDLVTWATT 180
Query: 389 L 389
+
Sbjct: 181 I 181
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/561 (36%), Positives = 335/561 (59%), Gaps = 26/561 (4%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
+ +++ + N +I + +++AR LF+ M R+ ++WT +++G+ Q+G E +F
Sbjct: 202 DSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFR 261
Query: 98 SL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+ Q ++++ S+L +C L GK +HA ++ D +V+V +AL++MYSK
Sbjct: 262 RMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCR 321
Query: 153 ADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+ + A VF M +N+ISW ++I + + EEA+ +F ++QR+G
Sbjct: 322 SIKLAETVFRRMTCKNIISWTALIVGY-------------GQNGCSEEAVRVFSEMQRDG 368
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ PD T V+ +CA L + + H L G ++NAL+ Y +CGSI +
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
++FD+M++HD VSW +++ YA G+AKE + LF M V+PD TF+ +LSACS AG
Sbjct: 429 RLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
V++G FHSM ++HG+VP DHY CM+DL R G++ EAE+ I++MPM PD++ W L
Sbjct: 489 FVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTL 548
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +CR G+ + + AA L +++P + +V + +++ G +N+ +R+ M+ +V+
Sbjct: 549 LSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVK 608
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PG SWI+ +N+VH F++ + HP + I++KLE L ++ GY P+ S LHD+ +
Sbjct: 609 KEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADT 668
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K + HHSEKLA+ F ++ + IRI+KN+R+CVDCHN K S + G++I+
Sbjct: 669 DKVHMVSHHSEKLAIAFGLI----FVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDIL 724
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+ RFH F D +CSC D+W
Sbjct: 725 VRDAVRFHKFSDGVCSCGDFW 745
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 238/490 (48%), Gaps = 65/490 (13%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA L A A A LH ++ P+ P ++ NHL+ Y K G AR +FD
Sbjct: 9 YAALLSAAA-RTEPHVAGALHCVILRTLPHPPP-TYLLNHLLTAYGKAGRHARARRVFDA 66
Query: 68 MP-------------------------------KRNVVSWTALISGYAQHGNAEECFRLF 96
MP +R++VS+ A+I+G++ G+ + R++
Sbjct: 67 MPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVY 126
Query: 97 CSLLQ---YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYS 149
+LLQ P+ ++++++++ L GK H L+ A+ +V + L++MY+
Sbjct: 127 LALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYA 186
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN------------ 196
K S +A + F+ ++ +NV+ +N+MI CK+ +A LF M +
Sbjct: 187 KMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTG 246
Query: 197 ------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
E EAL +FR+++ +G+A D TF +L AC L +H+ I + ++D+
Sbjct: 247 FTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDN 306
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
+ +AL+ Y++C SI L++ VF +MT +++SW +++ Y +G ++EA+++FS M
Sbjct: 307 VFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
+ PD T S++S+C++ ++EG + FH + G++ + +V L G+ G I
Sbjct: 367 DGIDPDDYTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIE 425
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETR-LAELAATKLKQLEPGDSLGFVQMSNIY 426
+A +L EM D V W+ L+ + G + +L L + D + F+ + +
Sbjct: 426 DAHRLFDEMSFH-DQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSAC 484
Query: 427 CLSGSFNKAR 436
+G K R
Sbjct: 485 SRAGFVEKGR 494
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/591 (37%), Positives = 341/591 (57%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L C G I Q+H +++ D++V+ LI+MY+K+G+LD AR + +
Sbjct: 348 YPCLLRTCTYAGEINLGEQIH--LLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEV 405
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HG 122
+ ++VVSWT++I+GY QH +E F + + +P+ LAS + +C + G
Sbjct: 406 LEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H+ A V + NAL+N+Y++ + EA+ +FE +E ++ I+WN M++ F
Sbjct: 466 QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS 525
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L +A+E+F KM + G+ + TF + A A L + +H+
Sbjct: 526 GLYEEALEVFIKM-------------YQAGVKYNVFTFVSSISASANLADIKQGKQIHAT 572
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G +T +ANALI Y +CGSI +K F +M+ + VSWN+I+ + + HG EA
Sbjct: 573 VIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEA 632
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L LF M ++P+ TF+ +L+ACSH GLV+EG F SM HG+ P+ DHYAC+VD
Sbjct: 633 LDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVD 692
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+LGR G++ A K + EMP+ ++++W LL +CR H + ELAA L +LEP DS
Sbjct: 693 ILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSAS 752
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SN Y ++G + +RK MK VRK PG SWIE++N VH F G + HP I
Sbjct: 753 YVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQI 812
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+K L +L +L +GY+ H+ E+E K+ + HSEKLA+ F +M+
Sbjct: 813 YKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMS----LPPSM 868
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R++KN+R+C DCH +MK S+++G+EIV+RD RFHHF + CSC D+W
Sbjct: 869 PLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 217/421 (51%), Gaps = 34/421 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+L ACA G++ + QLH +++ D + L+++Y K G + +A +F
Sbjct: 248 ASLLAACASIGDLNKGKQLHSYLLK--AGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GK 123
+ NVV W ++ Y Q + + F LFC ++ PNEF+ +L +C Y G+
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF---R 179
+H L++K ++ +YV+ LI+MYSK D+A ++ E +E ++V+SW SMIA +
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
CK EAL F+ +Q G+ PD + + ACAG+ R +H
Sbjct: 426 FCK----------------EALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIH 469
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S + G+ D I NAL++ YARCG + +F+ + + D ++WN ++ +A G +
Sbjct: 470 SRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYE 529
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL++F M V+ + TFVS +SA ++ +++G ++ H+ + G + + +
Sbjct: 530 EALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQI-HATVIKTGCTSETEVANAL 588
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPG 414
+ L G+ G I +A+ EM E + V W+ ++ SC +HG A ++KQ L+P
Sbjct: 589 ISLYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPN 647
Query: 415 D 415
D
Sbjct: 648 D 648
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 181/368 (49%), Gaps = 30/368 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--- 96
+D N LI++YAK G + AR +F+++ R+ VSW A++SGYA++G EE L+
Sbjct: 75 EDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQM 134
Query: 97 -CSLLQYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK- 150
CS + P + L+SVL +C + G+LVHA K + V NALI +Y +
Sbjct: 135 HCSGV---VPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRF 191
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A +VF M + + +++N++I+ C N E AL +F +++
Sbjct: 192 GSLSLAERVFSEMPYCDRVTFNTLISRHAQCG-------------NGESALEIFEEMRLS 238
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G PD T + +L ACA + +HS + K G D +I +L+ Y +CG I +
Sbjct: 239 GWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEA 298
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
++F ++V WN +L AY ++ LF M V+P+ T+ LL C++A
Sbjct: 299 LEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYA 358
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G + G ++ H + G + ++D+ + G + +A +++ E+ D V W+
Sbjct: 359 GEINLGEQI-HLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRIL-EVLEAKDVVSWTS 416
Query: 388 LLGSCRKH 395
++ +H
Sbjct: 417 MIAGYVQH 424
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 160/332 (48%), Gaps = 25/332 (7%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVLISC--DYLHGKL 124
M +R S ++G+ H + E+ LF + + Q A L C H L
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60
Query: 125 V---HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
V HA A+ L N LI++Y+K A +VFE + R+ +SW +M++ +
Sbjct: 61 VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGY-- 118
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ EEA+ L+ Q+ G+ P S VL AC VH+
Sbjct: 119 -----------ARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHA 167
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G +TV+ NALI Y R GS+SL+++VF +M Y D V++N+++ +A G +
Sbjct: 168 QVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGES 227
Query: 301 ALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL++F M + PD T SLL+AC+ G + +G K HS L G+ P ++
Sbjct: 228 ALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKG-KQLHSYLLKAGMSPDYIIEGSLL 286
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
DL + G I+EA ++ + + V+W+++L
Sbjct: 287 DLYVKCGVIVEALEIFKSGD-RTNVVLWNLML 317
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/571 (40%), Positives = 336/571 (58%), Gaps = 38/571 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV + LI+MY+K GYL+DAR LFDE+P+RNVVSWT++ISGY Q+ A E LF
Sbjct: 119 SDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEF 178
Query: 100 L------------QYFFPNEFSLASVLISCDYLHGK----LVHALALKFSLDAHVYVANA 143
L + L V+ +C + K VH LA+K + + V N
Sbjct: 179 LLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNT 238
Query: 144 LINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEAL 201
L++ Y+K C + + KVF+ ME +V SWNS+IA + L +A LF+ M E
Sbjct: 239 LMDAYAK-CGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVR 297
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
+ + T S VL ACA + +H + K ED+ V+ +++ Y
Sbjct: 298 Y------------NAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMY 345
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
+CG + ++++ FD++ ++ SW ++ Y +HG KEA+++F M ++P+ TFV
Sbjct: 346 CKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFV 405
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
S+L+ACSHAGL++EG F+ M V P ++HY+CMVDLLGR G + EA LI+EM +
Sbjct: 406 SVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKV 465
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
+PD ++W LLG+CR H L E++A KL +L+P + +V +SNIY +G ++ +
Sbjct: 466 KPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERM 525
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
R MK + K PG S +E + RVH F G K HPQ E I++ L+EL +L+ +GY+P
Sbjct: 526 RILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNV 585
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
+ L+D++ E K L HSEKLA+ F IMN SVI+I+KN+RIC DCH +KL
Sbjct: 586 TSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNS----VPGSVIQIIKNLRICGDCHFAIKL 641
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++ +EIV+RDS RFHHFKD +CSC DYW
Sbjct: 642 ISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 185/352 (52%), Gaps = 17/352 (4%)
Query: 62 RHLFDE-MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY 119
R +F + + K +V SW ++I+ +A+ G++ + F S+ + PN + + SC
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNS 173
L+ GK +H A F + ++VA+ALI+MYSK C ++A K+F+ + RNV+SW S
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSK-CGYLNDARKLFDEIPERNVVSWTS 157
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI+ + + +A+ LF + +E + ++ G+ D V+ ACA + +
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDET--DYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH L K GFE + N L+ AYA+CG IS+S++VFD M D+ SWNS++ YA
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 294 LHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+G + EA LFS+M V+ ++ T ++L AC+H+G +Q G K H + +
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIG-KCIHDQVVKMELEDN 334
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
L +VD+ + GR+ A K + + W+V++ HG + A
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMHGHGKEA 385
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 341/563 (60%), Gaps = 32/563 (5%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
E ++FV + L++MY KFG +A+ + D + +++VV TALI GY+Q G E + F
Sbjct: 197 EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 256
Query: 98 SLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-S 151
S+L + PNE++ ASVLISC D +GKL+H L +K ++ + +L+ MY + S
Sbjct: 257 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D++ +VF+ +E+ N +SW S+I+ + EE AL FR++ R+
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGL-------------VQNGREEMALIEFRKMMRDS 363
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P+ T S L+ C+ L +H ++ KYGF+ D + LI Y +CG +++
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAG 328
VFD ++ D++S N+++ +YA +G +EAL LF N+ +QP+ T +S+L AC+++
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV+EG ++F S ++ ++ DHYACMVDLLGR GR+ EAE L E+ + PD V+W L
Sbjct: 484 LVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTL 541
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +C+ H + +AE K+ ++EPGD + MSN+Y +G +N+ ++ +MK +++
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK 601
Query: 449 KYPGLSWIEIENRVHEFASGGK-RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
K P +SW+EI H F +G HP E I + LEELI + K +GYV + S D+EE
Sbjct: 602 KNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEE 661
Query: 508 EHKEEQLYHHSEKLALVFAI-MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
KE L+ HSEKLA+ FA+ N G IRI+KN+R+CVDCH+++K+ S ++ +E
Sbjct: 662 TAKERSLHQHSEKLAIAFAVWRNVG------GSIRILKNLRVCVDCHSWIKIVSRVMKRE 715
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+ RDS RFHHF+D CSC DYW
Sbjct: 716 IICRDSKRFHHFRDGSCSCGDYW 738
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 203/413 (49%), Gaps = 34/413 (8%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L +T ++ L C +I + HM+ + FP E + L++ K G +D
Sbjct: 62 LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE----ISGSKLVDASLKCGDIDY 117
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDY 119
AR +FD M +R++V+W +LI+ +H ++E ++ + P+E++L+SV +
Sbjct: 118 ARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSD 177
Query: 120 L----HGKLVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
L + H LA+ L+ ++V+V +AL++MY K EA V + +E ++V+ +
Sbjct: 178 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 237
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I +++ + EA+ F+ + E + P+ T++ VL +C L
Sbjct: 238 LIVG-------------YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIG 284
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+ +H L+ K GFE +L+ Y RC + S +VF + Y + VSW S++
Sbjct: 285 NGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLV 344
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G+ + AL F M +++P+S T S L CS+ + +EG ++ H ++ +G
Sbjct: 345 QNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI-HGIVTKYGF--DR 401
Query: 351 DHYA--CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D YA ++DL G+ G + +L+ + E D + + ++ S ++G R A
Sbjct: 402 DKYAGSGLIDLYGKCG-CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 453
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/591 (37%), Positives = 347/591 (58%), Gaps = 31/591 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+ L A +L + + Q+H H I N D FV+ LI+ Y++ + +A LF
Sbjct: 428 SVLKAASSLPEGLSLSKQIHVHAIKT--NNVADSFVSTALIDAYSRNRCMKEAEVLFGR- 484
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGK 123
++V+W A++SGY Q + + LF + Q ++F+LA+VL +C +L GK
Sbjct: 485 NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGK 544
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRAC 181
VHA A+K D ++V++ +++MY K C D A F+++ + ++W ++I+ C
Sbjct: 545 QVHAYAIKSGYDLDLWVSSGILDMYVK-CGDMSAAQFAFDSIPVPDDVAWTTLISG---C 600
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ EE AL +F Q++ G+ PD T + + KA + L +H+
Sbjct: 601 IENGE----------EERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 650
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K D + +L+ YA+CGSI + +F ++ ++ +WN++L A HG+ KEA
Sbjct: 651 ALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEA 710
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQLF M ++PD TF+ +LSACSH+GLV E K SM ++G+ P+++HY+C+ D
Sbjct: 711 LQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLAD 770
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LGR G + EAE LI M ME + ++ LL +CR G+T + ATKL +LEP DS
Sbjct: 771 ALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 830
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SN+Y + +++ +L R MKG +V+K PG SWIE++N++H F + +PQ E I
Sbjct: 831 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELI 890
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+KK++++I +K GYVPET L D+EEE KE LY+HSEKLA+ F +++ +
Sbjct: 891 YKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPP----ST 946
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN+R+C DCHN MK S + +EIV+RD+NRFH FKD ICSC DYW
Sbjct: 947 PIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 186/371 (50%), Gaps = 28/371 (7%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V+N LINMY K + AR +F+ M +R+++SW ++I+G AQ E LF LL+
Sbjct: 357 LTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLR 416
Query: 102 YFF-PNEFSLASVLISCDYLH-----GKLVHALALKFSLDAHVYVANALINMYSKS-CAD 154
P+ +++ SVL + L K +H A+K + A +V+ ALI+ YS++ C
Sbjct: 417 CGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMK 476
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA +F F ++++WN+M++ + + +ELFA M ++G
Sbjct: 477 EAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALM-------------HKQGERS 522
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T + VLK C L VH+ K G++ D +++ ++ Y +CG +S ++ F
Sbjct: 523 DDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 582
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQ 331
D + D V+W +++ +G+ + AL +FS M V PD T +L A S ++
Sbjct: 583 DSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 642
Query: 332 EGNKVFHSMLE-NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+G ++ + L+ N P + +VD+ + G I +A L + + M + W+ +L
Sbjct: 643 QGRQIHANALKLNCTSDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLV 699
Query: 391 SCRKHGETRLA 401
+HGE + A
Sbjct: 700 GLAQHGEGKEA 710
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 26/339 (7%)
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----GKLVHA 127
++S ++SGY G + F +++ ++ + VL + L G+ VH
Sbjct: 287 IISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHC 346
Query: 128 LALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
+ALK LD + V+N+LINMY K A VF NM R++ISWNS+IA LE
Sbjct: 347 MALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEV- 405
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA-VHSLIAKY 245
EA+ LF QL R G+ PD T + VLKA + L S +H K
Sbjct: 406 ------------EAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKT 453
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
D+ ++ ALI AY+R + ++ +F + + DLV+WN+++ Y + L+LF
Sbjct: 454 NNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELF 512
Query: 306 SNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+ M+ Q D T ++L C + +G +V H+ G L + ++D+ +
Sbjct: 513 ALMHKQGERSDDFTLATVLKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVK 571
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G + A+ +P+ PD V W+ L+ C ++GE A
Sbjct: 572 CGDMSAAQFAFDSIPV-PDDVAWTTLISGCIENGEEERA 609
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 191/466 (40%), Gaps = 107/466 (22%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG-----NAEEC 92
E + F+ N+LI+MY+K G L AR +FD+MP+R++VSW ++++ YAQ N +E
Sbjct: 77 ENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEA 136
Query: 93 FRLFCSLLQ-YFFPNEFSLASVLISCDYLHGKLV------HALALKFSLDAHVYVANALI 145
F LF L Q + + +L+ +L C LH V H A K LD +VA AL+
Sbjct: 137 FLLFRILRQDVVYTSRMTLSPMLKLC--LHSGYVCASESFHGYACKIGLDGDDFVAGALV 194
Query: 146 NMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
N+Y K E +FE M +R+V+ WN M+ A + +M +EEA+ L
Sbjct: 195 NIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA-------------YLEMGFKEEAIDLS 241
Query: 205 RQLQREGMAPDWCTFSIVLKAC-----AGLVTE----RHASAVHSLIAK----------- 244
G+ P+ T ++ + AG V ASAV +I++
Sbjct: 242 SAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAG 301
Query: 245 --------------YGFEDDTVIANALIHAYARCGSISLSKQ------------------ 272
E D V ++ R S++L +Q
Sbjct: 302 QYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSN 361
Query: 273 -----------------VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
VF+ M+ DL+SWNS++ A EA+ LF + ++P
Sbjct: 362 SLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKP 421
Query: 313 DSATFVSLLSACSH--AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
D T S+L A S GL H++ N+ V ++D R + EAE
Sbjct: 422 DHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNN--VADSFVSTALIDAYSRNRCMKEAE 479
Query: 371 KLIREMPMEPDSVIWSVLL-GSCRKHGETRLAELAATKLKQLEPGD 415
L D V W+ ++ G + H + EL A KQ E D
Sbjct: 480 VLFGRNNF--DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSD 523
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 16/214 (7%)
Query: 110 LASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L + + D + GK HA L + ++ N LI+MYSK + A +VF+ M R++
Sbjct: 53 LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC-- 226
+SWNS++AA+ AQ+ E ++N +EA LFR L+++ + T S +LK C
Sbjct: 113 VSWNSILAAY------AQSSE--GVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLH 164
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
+G V + + H K G + D +A AL++ Y + G + + +F++M Y D+V WN
Sbjct: 165 SGYVCA--SESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWN 222
Query: 287 SILKAYALHGQAKEALQL---FSNMNVQPDSATF 317
+LKAY G +EA+ L F + P+ T
Sbjct: 223 LMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/588 (38%), Positives = 344/588 (58%), Gaps = 56/588 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + AC+ N++ +QLH + + +LFV N LI +Y K G L +AR + DE
Sbjct: 136 YPCVLKACSCSDNLRIGLQLHGAVFKVGLD--LNLFVGNGLIALYGKCGCLPEARCVLDE 193
Query: 68 MPKRNVVSWTALISGYAQH---GNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL 124
M ++VVSW ++++GYAQ+ +A + R + Q P+ ++AS+L +
Sbjct: 194 MQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQK--PDACTMASLLPA-------- 243
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
S + +YV ++F N+E ++++SWN MI+ + +
Sbjct: 244 ----VTNTSSENVLYVE----------------EMFMNLEKKSLVSWNVMISVYMKNSMP 283
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
++++L+ +M E + PD T + VL+AC L +H + +
Sbjct: 284 GKSVDLYLQMGKCE-------------VEPDAITCASVLRACGDLSALLLGRRIHEYVER 330
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
+ ++ N+LI YARCG + +K+VFD+M + D+ SW S++ AY + GQ A+ L
Sbjct: 331 KKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVAL 390
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F+ M PDS FV++LSACSH+GL+ EG F M +++ + P ++H+AC+VDLLG
Sbjct: 391 FTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLG 450
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R GR+ EA +I++MPM+P+ +W LL SCR + + LAA KL QL P +S +V
Sbjct: 451 RSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVL 510
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY +G + + IR MK R+RK PG+S +E+ N+VH F +G HPQ + I+++
Sbjct: 511 LSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEE 570
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L L+G++K +GYVP+T ALHD+EEE KE L HSEKLA+VFAI+N + S IR
Sbjct: 571 LSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNT-----QESPIR 625
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I KN+R+C DCH KL S ++ +EIV+RD+NRFHHFKD ICSC DYW
Sbjct: 626 ITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 20/177 (11%)
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGMA 213
A VF+ + RNVI +N MI ++ M N ++AL +FR + G +
Sbjct: 86 ARNVFDVIPERNVIFYNVMIRSY---------------MNNHLYDDALLVFRDMVSGGFS 130
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T+ VLKAC+ R +H + K G + + + N LI Y +CG + ++ V
Sbjct: 131 PDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCV 190
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHA 327
D+M D+VSWNS++ YA + Q +AL + M+ +PD+ T SLL A ++
Sbjct: 191 LDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNT 247
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/601 (36%), Positives = 348/601 (57%), Gaps = 25/601 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A++ AC+ + ++H +++ N + ++ FV + L++MY ++ R +FD +
Sbjct: 301 ASVLPACSHLERLDVGKEIHAYVLRN-NDLIENSFVGSALVDMYCNCRQVESGRRVFDHI 359
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHG 122
R + W A+ISGYA++G E+ LF +++ PN ++ASV+ +C + +
Sbjct: 360 LGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNK 419
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H A+K YV NAL++MYS+ D + +F++ME R+ +SWN+MI +
Sbjct: 420 ESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLS 479
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMA----PDWCTFSIVLKACAGLVTERHASA 237
+ A+ L +M+ E + + + P+ T VL CA L
Sbjct: 480 GRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKE 539
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+ + D + +AL+ YA+CG ++LS++VF++M ++++WN ++ A +HG+
Sbjct: 540 IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGK 599
Query: 298 AKEALQLFSNM--------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+EAL+LF NM +P+ TF+++ +ACSH+GL+ EG +F+ M +HGV P
Sbjct: 600 GEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPT 659
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKL 408
DHYAC+VDLLGR G++ EA +L+ MP E D V WS LLG+CR H L E+AA L
Sbjct: 660 SDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNL 719
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
LEP + +V +SNIY +G +NKA +RK M+ V+K PG SWIE + VH+F +G
Sbjct: 720 LHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAG 779
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HPQ E + LE L +++ GYVP+TS LH+++E+ KE L HSEKLA+ F I+
Sbjct: 780 DVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGIL 839
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
N + IR+ KN+R+C DCH K S ++ +EI+VRD RFHHFK+ CSC DY
Sbjct: 840 NT----PPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDY 895
Query: 589 W 589
W
Sbjct: 896 W 896
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 203/409 (49%), Gaps = 47/409 (11%)
Query: 17 LHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSW 76
+HG ++ QLH + + Q F N L+ MYAK G +DD++ LF+ R++VSW
Sbjct: 210 MHG-LRLGKQLHGYSLRV---GDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSW 265
Query: 77 TALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALK 131
+IS ++Q E F +L+ + ++ASVL +C +L GK +HA L+
Sbjct: 266 NTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLR 325
Query: 132 FS-LDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
+ L + +V +AL++MY +C + +VF+++ R + WN+MI+ + L+ +A+
Sbjct: 326 NNDLIENSFVGSALVDMYC-NCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKAL 384
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
LF +M ++ G+ P+ T + V+ AC + ++H K GF+
Sbjct: 385 ILFIEM------------IKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFK 432
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
+D + NAL+ Y+R G + +S+ +FD M D VSWN+++ Y L G+ AL L M
Sbjct: 433 EDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEM 492
Query: 309 N--------------------VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+P++ T +++L C+ + +G ++ + N +
Sbjct: 493 QRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNM-LAS 551
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ + +VD+ + G + + ++ EMP + + W+VL+ +C HG+
Sbjct: 552 DITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGK 599
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 186/390 (47%), Gaps = 43/390 (11%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++K Q+H + F + V N L+NMY K G + D +FD + R+ VSW +
Sbjct: 107 DLKTGEQIHAAAVK-FGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSF 165
Query: 80 ISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH-------GKLVHALALK 131
I+ + E+ F ++ ++ + F+L SV ++C L GK +H +L+
Sbjct: 166 IAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLR 225
Query: 132 FSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
D + NAL+ MY+K D++ +FE+ R+++SWN+MI++
Sbjct: 226 VG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISS------------- 271
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG-FED 249
F++ EAL FR + EG+ D T + VL AC+ L +H+ + + +
Sbjct: 272 FSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIE 331
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
++ + +AL+ Y C + ++VFD + + WN+++ YA +G ++AL LF M
Sbjct: 332 NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMI 391
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL----DHYA--CMVDL 359
+ P++ T S++ AC H + F + HG +L D Y ++D+
Sbjct: 392 KVAGLLPNTTTMASVMPACVHC-------EAFSNKESIHGYAVKLGFKEDRYVQNALMDM 444
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
R+G++ +E + M + D V W+ ++
Sbjct: 445 YSRMGKMDISETIFDSMEVR-DRVSWNTMI 473
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANAL 257
EA+ + ++ G PD F VLKA +GL + +H+ K+G+ +V +AN L
Sbjct: 75 EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTL 134
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
++ Y +CG I +VFD++T D VSWNS + A + ++AL+ F M N++ S
Sbjct: 135 VNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSS 194
Query: 315 ATFVSLLSACSHAGLVQ--EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
T VS+ ACS+ G++ K H G + A M + ++GR+ +++ L
Sbjct: 195 FTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMA-MYAKLGRVDDSKAL 253
Query: 373 IREMPMEPDSVIWSVLLGS 391
++ D V W+ ++ S
Sbjct: 254 FESF-VDRDMVSWNTMISS 271
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/592 (37%), Positives = 359/592 (60%), Gaps = 29/592 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ ACA G+I+ Q+H + +LFV ++L +MY+K G + DA +F+E
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKF--GIGSELFVGSNLEDMYSKCGAMFDACKVFEE 166
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
MP ++ VSWTA+I GY++ G EE F ++ + ++ L S L +C L G
Sbjct: 167 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFE-NMEFRNVISWNSMIAAFRA 180
+ VH+ +K ++ ++V NAL +MYSK+ E A VF + E RNV+S+ +I +
Sbjct: 227 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGY-- 284
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+E + IE + L +F +L+R+G+ P+ TFS ++KACA + +H+
Sbjct: 285 --VETEQIE---------KGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHA 333
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K F++D +++ L+ Y +CG + + Q FD++ ++WNS++ + HG K+
Sbjct: 334 QVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKD 393
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A++ F M V+P++ TF+SLL+ CSHAGLV+EG F+SM + +GVVP +HY+C++
Sbjct: 394 AIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 453
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR GR+ EA++ I MP EP++ W LG+CR HG+ + +LAA KL +LEP +S
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSG 513
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V +SNIY + R +R M+ V+K PG SW+++ + H F + H ++ A
Sbjct: 514 ALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSA 573
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++KL+ L+ Q+K GYVP T D+++ KE+ L+ HSE++A+ FA++ S+ +
Sbjct: 574 IYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALI---SMPIGK 630
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+I + KN+R+CVDCH+ +K S + G++I+VRD++RFHHF D CSC DYW
Sbjct: 631 PII-VKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 208/406 (51%), Gaps = 29/406 (7%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L T A + A +++ QLH +I F+TNHL+NMY+K G LD A
Sbjct: 2 LRDTNALAHVIQTYAKTKRLRRGKQLHALLI--CAGYTPCTFLTNHLVNMYSKCGELDHA 59
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL 120
LFD MP+RN+VSWTA+ISG +Q+ E R FC + + P +F+ +S + +C L
Sbjct: 60 LKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASL 119
Query: 121 H----GKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMI 175
GK +H LALKF + + ++V + L +MYSK A +A KVFE M ++ +SW +MI
Sbjct: 120 GSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMI 179
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
++K+ EEAL F+++ E + D L AC L +
Sbjct: 180 DG-------------YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD-KMTYHDLVSWNSILKAYAL 294
+VHS + K GFE D + NAL Y++ G + + VF ++VS+ ++ Y
Sbjct: 227 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVE 286
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE-NHGVVPQL 350
Q ++ L +F + ++P+ TF SL+ AC++ +++G ++ +++ N P +
Sbjct: 287 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 346
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ +VD+ G+ G + A + E+ +P + W+ L+ +HG
Sbjct: 347 S--SILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWNSLVSVFGQHG 389
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
R +H+L+ G+ T + N L++ Y++CG + + ++FD M +LVSW +++
Sbjct: 22 RRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81
Query: 293 ALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ + + EA++ F M + P F S + AC+ G ++ G K H + G+ +
Sbjct: 82 SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG-KQMHCLALKFGIGSE 140
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
L + + D+ + G + +A K+ EMP + D V W+ ++ K GE A LA K+
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSKIGEFEEALLAFKKM 198
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/590 (38%), Positives = 345/590 (58%), Gaps = 28/590 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G + QLH ++ + DLFV+ L++MY+K L+DAR F+ +
Sbjct: 363 SSALKACAGMGLKELGRQLHSSLMKM--DMESDLFVSVGLVDMYSKCDLLEDARMAFNLL 420
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----GK 123
P++++++W A+ISGY+Q+ E LF + + N+ +L+++L S L +
Sbjct: 421 PEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCR 480
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
VH L++K + +YV N+LI+ Y K S ++A ++FE +++S+ SMI A+
Sbjct: 481 QVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY---- 536
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A+ EEAL LF ++Q + PD S +L ACA L +H I
Sbjct: 537 ---------AQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHI 587
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
KYGF D N+L++ YA+CGSI + + F ++T +VSW++++ A HG ++AL
Sbjct: 588 LKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQAL 647
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
QLF+ M V P+ T VS+L AC+HAGLV E F SM E G P +HYACM+DL
Sbjct: 648 QLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDL 707
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G+I EA +L+ +MP E ++ +W LLG+ R H + L AA L LEP S
Sbjct: 708 LGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTH 767
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V ++NIY +G + +R+ M+ S+V+K PG+SWIE++++V+ F G + H + + I+
Sbjct: 768 VLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIY 827
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
KL+EL + GYVP + LHD+E+ KE LYHHSEKLA+ F ++ + +
Sbjct: 828 AKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIAT----PQGAP 883
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+CVDCH K ++ +EI+VRD NRFHHFKD CSC DYW
Sbjct: 884 IRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 219/429 (51%), Gaps = 61/429 (14%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++++ AC++ +++ Q+H ++ + F D+FV N L+ MYAK D++ LFD
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEG---DVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLH 121
E+P+RNVVSW AL S Y Q E LF + L PNEFSL+S++ +C D
Sbjct: 217 EIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIAAFR 179
GK++H +K D + ANAL++MY+K AD A VFE ++ +++SWN++IA
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLAD-AISVFEKIKQPDIVSWNAVIAG-- 333
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C L ++ E+AL L Q++R G+ P+ T S LKACAG+ + +H
Sbjct: 334 -CVLH----------EHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLH 382
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S + K E D ++ L+ Y++C + ++ F+ + DL++WN+I+ Y+ + +
Sbjct: 383 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 442
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV--------FH-------SML 341
EAL LF M + + T ++L + + +V +V FH S++
Sbjct: 443 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 502
Query: 342 ENHG---------------VVPQLDHYACMVDLLGRVGRILEAEKL---IREMPMEPDSV 383
+++G + L + M+ + G+ EA KL +++M ++PD
Sbjct: 503 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRF 562
Query: 384 IWSVLLGSC 392
+ S LL +C
Sbjct: 563 VCSSLLNAC 571
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 209/411 (50%), Gaps = 36/411 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAK---FG 56
F ++ Y+ L C +++ +Q+H H+ + ++P + NHLIN+Y+K FG
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPS---IRNHLINLYSKCRNFG 108
Query: 57 YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLI 115
Y AR L DE + ++VSW+ALISGYAQ+G F + L NEF+ +SVL
Sbjct: 109 Y---ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165
Query: 116 SC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVI 169
+C D GK VH + + + V+VAN L+ MY+K C + ++ ++F+ + RNV+
Sbjct: 166 ACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAK-CDEFLDSKRLFDEIPERNVV 224
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SWN++ + + +A+ LF +M G+ P+ + S ++ AC GL
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEM-------------VLSGIKPNEFSLSSMVNACTGL 271
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+H + K G++ D ANAL+ YA+ G ++ + VF+K+ D+VSWN+++
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVI 331
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
LH ++AL+L M + P+ T S L AC+ GL + G ++ HS L +
Sbjct: 332 AGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQL-HSSLMKMDM 390
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
L +VD+ + + +A +P E D + W+ ++ ++ E
Sbjct: 391 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISGYSQYWE 440
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 37/341 (10%)
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAW- 157
F P S + +L C G +HA K L + N LIN+YSK C + +
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSK-CRNFGYA 110
Query: 158 -KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
K+ + +++SW+++I+ + L A L F ++ G+ +
Sbjct: 111 RKLVDESSEPDLVSWSALISGYAQNGLGGGA-------------LMAFHEMHLLGVKCNE 157
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TFS VLKAC+ + R VH ++ GFE D +AN L+ YA+C SK++FD+
Sbjct: 158 FTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDE 217
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
+ ++VSWN++ Y EA+ LF M ++P+ + S+++AC+ G
Sbjct: 218 IPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC- 392
K+ H L G +VD+ +VG + +A + ++ +PD V W+ ++ C
Sbjct: 278 -KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCV 335
Query: 393 -RKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
+H E L L K + P NI+ LS +
Sbjct: 336 LHEHHEQALELLGQMKRSGICP----------NIFTLSSAL 366
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++L +ACA +Q QLH H++ D+F N L+NMYAK G +DDA F
Sbjct: 563 VCSSLLNACANLSAFEQGKQLHVHILKY--GFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 620
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
E+ +R +VSW+A+I G AQHG+ + +LF +L + PN +L SVL +C+ H LV
Sbjct: 621 ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACN--HAGLV 678
Query: 126 HALALKFSLDAHVYVANALINMYS--------KSCADEAWKVFENMEFR-NVISWNSMIA 176
L F ++ + Y+ +EA ++ M F N W +++
Sbjct: 679 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 738
Query: 177 AFR 179
A R
Sbjct: 739 AAR 741
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
K + I+ + + + + + + P ++S +L C + R +H+
Sbjct: 22 KPAPKLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAH 81
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K G DD I N LI+ Y++C + ++++ D+ + DLVSW++++ YA +G A
Sbjct: 82 ITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGA 141
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L F M V+ + TF S+L ACS ++ G +V H ++ G + +V
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV-HGVVVVSGFEGDVFVANTLVV 200
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ + L++++L E+P E + V W+ L SC
Sbjct: 201 MYAKCDEFLDSKRLFDEIP-ERNVVSWNALF-SC 232
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/595 (37%), Positives = 353/595 (59%), Gaps = 44/595 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGY---LDDARHL 64
+++ AC G+++ +QLH + F + D V+ L++MYAK +D A +
Sbjct: 258 SSMISACTELGSVRLGLQLHSLALRMGFAS---DACVSCGLVDMYAKSNIEQAMDYANKV 314
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLL-QYFFPNEFSLASVLISC----D 118
F+ M K +V+SWTALISGY Q G E + LF +L + PN + +S+L +C D
Sbjct: 315 FERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISD 374
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAA 177
+ G+ VHA +K + A V NAL++MY++S C +EA +VF + R++IS
Sbjct: 375 HDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS------- 427
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
C E + L ++ R M TF+ ++ A A +
Sbjct: 428 ---CITEGRDAPLD-------------HRIGRMDMGISSSTFASLISAAASVGMLTKGQQ 471
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H++ K GF D ++N+L+ Y+RCG + + + F+++ +++SW S++ A HG
Sbjct: 472 LHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY 531
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A+ AL LF +M V+P+ T++++LSACSH GLV+EG + F SM +HG++P+++HYA
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA 591
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLL R G + EA + I EMP++ D+++W LLG+CR H + E+AA + +LEP
Sbjct: 592 CMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPR 651
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D +V +SN+Y +G +++ IR M+ + + K GLSW+E+EN HEF +G HP+
Sbjct: 652 DPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPR 711
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I+ KL+ L+G++KGMGYVP+TS+ LHD+ +E KE+ L HSEK+A+ F ++ +
Sbjct: 712 AQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSA-- 769
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+C DCH+ +K S +EI++RDSNRFH KD CSC +YW
Sbjct: 770 --PKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 188/386 (48%), Gaps = 32/386 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V + LI+M A+ G L AR +FD + ++ VV WT LIS Y Q AEE +F L
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 101 QYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKS---- 151
+ F P+ ++++S++ +C L G +H+LAL+ + V+ L++MY+KS
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D A KVFE M +VISW ++I+ + ++ E + + LF ++ E
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQ------------ENKVMVLFGEMLNES 354
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P+ T+S +LKACA + VH+ + K + NAL+ YA G + ++
Sbjct: 355 IKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEAR 414
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQ 331
+VF+++ ++S + G+ M++ S+TF SL+SA + G++
Sbjct: 415 RVFNQLYERSMISCIT-------EGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLT 467
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + H+M G +V + R G + +A + E+ + + + W+ ++
Sbjct: 468 KGQQ-LHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELK-DRNVISWTSMISG 525
Query: 392 CRKHG--ETRLAELAATKLKQLEPGD 415
KHG E L+ L ++P D
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPND 551
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 166/337 (49%), Gaps = 36/337 (10%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWT 77
G+++ LH ++ + +D V N L+ +Y++ G + AR++FD M R++VSWT
Sbjct: 62 GDLRLGRALHRRLLRGDLLD-RDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWT 120
Query: 78 ALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC---------DYLHGKLVHA 127
A+ S A++G E L +L+ PN ++L +V +C + LVH
Sbjct: 121 AMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHK 180
Query: 128 LALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
+ L + V +ALI+M +++ A KVF+ + + V+ W +I+
Sbjct: 181 MGL---WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISR--------- 228
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
+ + + EEA+ +F +G PD T S ++ AC L + R +HSL + G
Sbjct: 229 ----YVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMG 284
Query: 247 FEDDTVIANALIHAYARCG---SISLSKQVFDKMTYHDLVSWNSILKAYALHG-QAKEAL 302
F D ++ L+ YA+ ++ + +VF++M +D++SW +++ Y G Q + +
Sbjct: 285 FASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVM 344
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
LF M +++P+ T+ S+L AC++ G +V
Sbjct: 345 VLFGEMLNESIKPNHITYSSILKACANISDHDSGRQV 381
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 166/350 (47%), Gaps = 41/350 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+++ ACA + Q+H H+I + N+ V N L++MYA+ G +++AR +F++
Sbjct: 362 YSSILKACANISDHDSGRQVHAHVIKS--NQAAAHTVGNALVSMYAESGCMEEARRVFNQ 419
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL-HGKLVH 126
+ +R ++IS + +A R+ + SL S S L G+ +H
Sbjct: 420 LYER------SMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLH 473
Query: 127 ALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A+ LK + +V+N+L++MYS+ C ++A + F ++ RNVISW SMI+
Sbjct: 474 AMTLKAGFGSDRFVSNSLVSMYSR-CGYLEDACRSFNELKDRNVISWTSMISG------- 525
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE-----RHASA 237
AK E AL LF + G+ P+ T+ VL AC+ GLV E R
Sbjct: 526 ------LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR 579
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHG 296
H LI + E + + L AR G + + + ++M D + W ++L A H
Sbjct: 580 DHGLIPR--MEHYACMVDLL----ARSGLVKEALEFINEMPLKADALVWKTLLGACRSHD 633
Query: 297 QAKEALQLFSN-MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
+ N + ++P D A +V L + + AGL E ++ +M +N+
Sbjct: 634 NIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNN 683
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 233 RHASAVHSLIAKYGFED-DTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILK 290
R A+H + + D D V+AN+L+ Y+RCG+++ ++ VFD M D+VSW ++
Sbjct: 65 RLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMAS 124
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV- 346
A +G +E+L L M + P++ T ++ AC L V ++ G+
Sbjct: 125 CLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLW 184
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ + ++D+L R G + A K+ + +E V+W++L+
Sbjct: 185 GTDIAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLI 226
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/606 (37%), Positives = 341/606 (56%), Gaps = 68/606 (11%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PN 106
L+ YA G RH+FDE+PK+NVV + +I Y + + +F ++ + P+
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 107 EFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
++ VL + D G +HA ++ LD +V+V N LI+MY K C EA +V +
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 162 NMEFRNVISWNSMIA----------AFRACK------LEAQA------------------ 187
M R+V+SWNS++A A CK L+ A
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNV 256
Query: 188 ---IELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKAC 226
E+F K+ N+ EA+ +F Q++ + PD + + VL AC
Sbjct: 257 SFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 316
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
L +H + + + + ++ NALI YA+CG + +++VFD+M + D+VSW
Sbjct: 317 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWT 376
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
S++ AY ++G+ ++A+ LFS M + PDS FVS+LSACSHAGL+ EG F M E
Sbjct: 377 SMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE 436
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL 403
+VP+++H+ CMVDLLGR G++ EA I++MPMEP+ +W LL +CR + + L
Sbjct: 437 CKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLL 496
Query: 404 AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVH 463
AA +L QL P S +V +SNIY +G + +R MK ++K PG+S E++NRVH
Sbjct: 497 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVH 556
Query: 464 EFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLAL 523
F +G + HPQ + I+++L+ +G++K GYVPET ALHD+EEE KE L HSEKLA+
Sbjct: 557 TFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAI 616
Query: 524 VFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRIC 583
FAI+N S IRI KN+R+C DCH KL S ++G+EI +RD+NRFHHF + +C
Sbjct: 617 AFAILNTAP----GSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVC 672
Query: 584 SCNDYW 589
SC DYW
Sbjct: 673 SCGDYW 678
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNF--PNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
A++ AC + ++HE+++ PN L + N LI+MYAK G L+ AR +FD
Sbjct: 310 ASVLPACGDLSALLLGRRIHEYVVRKRLQPN----LLLENALIDMYAKCGCLEYAREVFD 365
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
+M R+VVSWT++IS Y +G + LF + P+ + SVL +C +
Sbjct: 366 QMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 419
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/588 (38%), Positives = 355/588 (60%), Gaps = 33/588 (5%)
Query: 15 CALHG--NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRN 72
CA G +I Q+H +I N ++FV+N L++ Y+K + DAR LFDEMP+++
Sbjct: 258 CANIGLDDIVLGQQIHSFVIKT--NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQD 315
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLI----SCDYLHGKLVHA 127
VS+ +ISGYA G + F LF L F +F A++L + D+ G+ +HA
Sbjct: 316 GVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 375
Query: 128 LALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ + D+ + V N+L++MY+K C +EA +F N+ R+ + W +MI+A+
Sbjct: 376 QTIVTTADSEILVGNSLVDMYAK-CGKFEEAEMIFTNLTHRSAVPWTAMISAY------- 427
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ EE L LF ++++ + D TF+ +L+A A + + +HS I K
Sbjct: 428 ------VQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS 481
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
GF + +AL+ YA+CGSI + Q F +M ++VSWN+++ AYA +G+A+ L+ F
Sbjct: 482 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 541
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M +QPDS +F+ +LSACSH+GLV+EG F+SM + + + P+ +HYA +VD+L R
Sbjct: 542 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCR 601
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQ 421
GR EAEKL+ EMP++PD ++WS +L +CR H LA AA +L +E D+ +V
Sbjct: 602 SGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVN 661
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
MSNIY +G + + K M+ V+K P SW+EI++ H F++ + HPQ E I KK
Sbjct: 662 MSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKK 721
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
++ L ++ +GY P+TS ALH+ +E+ K E L +HSE+LA+ FA+++ E S I
Sbjct: 722 IDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALIS----TPEGSPIL 777
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+MKN+R C+DCH +K+ S ++G+EI VRDS RFHHF+D CSC D+W
Sbjct: 778 VMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 188/388 (48%), Gaps = 30/388 (7%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
+G + QA QL E M P+ ++ TN +I+ Y K G L +AR LFD M +R V+WT
Sbjct: 65 NGELSQARQLFEKM----PH--KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 118
Query: 78 ALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD--YLHGKL--VHALALKF 132
LI GY+Q +E F LF + + P+ + ++L C+ + ++ V +K
Sbjct: 119 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 178
Query: 133 SLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
D+ + V N L++ Y KS D A ++F+ M + +S+N+MI + L+ +A+ LF
Sbjct: 179 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLF 238
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+M+N G+ P TF+ VL A GL +HS + K F +
Sbjct: 239 VEMQNS-------------GLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNV 285
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ 311
++NAL+ Y++ S+ ++++FD+M D VS+N I+ YA G+ K A LF +
Sbjct: 286 FVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFT 345
Query: 312 P---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
F ++LS S+ L E + H+ ++ +VD+ + G+ E
Sbjct: 346 AFDRKQFPFATMLSIASNT-LDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEE 404
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHG 396
AE + + +V W+ ++ + + G
Sbjct: 405 AEMIFTNLTHR-SAVPWTAMISAYVQKG 431
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 132/267 (49%), Gaps = 23/267 (8%)
Query: 141 ANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
N +I+ Y KS EA K+F+ M R ++W +I + +++ +E
Sbjct: 86 TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGY-------------SQLNQFKE 132
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A LF Q+QR G PD+ TF +L C G + V + I K G++ ++ N L+
Sbjct: 133 AFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVD 192
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSAT 316
+Y + + L+ Q+F +M D VS+N+++ Y+ G ++A+ LF N ++P T
Sbjct: 193 SYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFT 252
Query: 317 FVSLLSACSHAGL--VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
F ++L C++ GL + G ++ HS + V + ++D + +++A KL
Sbjct: 253 FAAVL--CANIGLDDIVLGQQI-HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 309
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLA 401
EMP E D V ++V++ G+ + A
Sbjct: 310 EMP-EQDGVSYNVIISGYAWDGKHKYA 335
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 40/195 (20%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG- 296
+ + I K GF+ DT +N + + + G +S ++Q+F+KM + + VS N ++ Y G
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 297 ------------------------------QAKEALQLFSNM---NVQPDSATFVSLLSA 323
Q KEA +LF M +PD TFV+LLS
Sbjct: 99 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158
Query: 324 CSHAGLVQEGNKV--FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
C+ + GN++ + + G +L +VD + R+ A +L +EMP E D
Sbjct: 159 CNGHEM---GNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP-EID 214
Query: 382 SVIWSVLLGSCRKHG 396
SV ++ ++ K G
Sbjct: 215 SVSYNAMITGYSKDG 229
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/591 (37%), Positives = 342/591 (57%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A + AC N +H ++ N +DL+V L+ +Y + G DDA F +
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKT--NYERDLYVGVGLLELYTRCGDNDDAWRAFGD 207
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLHG---- 122
MPK +V+ W+ +IS +AQ G +E+ +FC + + F PN+F+ +SVL + +
Sbjct: 208 MPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLS 267
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +H ALK L V+V+NAL+ Y+K C +++ ++FE + RN +SWN++I ++
Sbjct: 268 KTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSY--- 324
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ + E AL LF + R + T+S +L+ACA L VH L
Sbjct: 325 ----------VQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCL 374
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
AK + D + NALI YA+CGSI ++ +FD + D VSWN+I+ Y++HG EA
Sbjct: 375 TAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEA 434
Query: 302 LQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+++F+ M +PD TFV +LSACS+ G + EG + F SM +++G+ P ++HY CMV
Sbjct: 435 IKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVW 494
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
L+GR G + +A K I ++P EP +IW LLG+C H + L ++A ++ +LEP D
Sbjct: 495 LMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEAS 554
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
V +SNIY + + +RK MK V+K PGLSWIE + VH F H + I
Sbjct: 555 HVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLI 614
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
LE L + + GY P+ + L D+E++ KE L+ HSE+LAL F ++ + C
Sbjct: 615 NGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCP--- 671
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KN+RICVDCH+ +KL S ++G++I+VRD NRFHHF++ CSC DYW
Sbjct: 672 -IRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 190/366 (51%), Gaps = 26/366 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
+ F+ LI+ Y+ G + AR +FDE+ +++VSWT +I+ YA++ E F +
Sbjct: 80 NTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMR 139
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ F PN F+ A VL +C ++ GK VH LK + + +YV L+ +Y++ C
Sbjct: 140 VAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTR-CGDN 198
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+AW+ F +M +VI W+ MI+ FA+ E+AL +F Q++R +
Sbjct: 199 DDAWRAFGDMPKNDVIPWSFMISR-------------FAQSGQSEKALEIFCQMRRAFVI 245
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ TFS VL+A A + + + +H K G D ++NAL+ YA+CG I S ++
Sbjct: 246 PNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMEL 305
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F+ ++ + VSWN+I+ +Y G + AL LFSNM VQ T+ S+L AC+ +
Sbjct: 306 FEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAAL 365
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ G +V H + + ++D+ + G I +A + + +M D V W+ ++
Sbjct: 366 ELGLQV-HCLTAKTIYGQDVAVGNALIDMYAKCGSIKDA-RFMFDMLDLRDKVSWNAIIC 423
Query: 391 SCRKHG 396
HG
Sbjct: 424 GYSMHG 429
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 139/269 (51%), Gaps = 22/269 (8%)
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVL---ISCDY 119
+FDEMP+RN VS+ LI GYAQ E F LF L + N F +VL +S ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 120 LH-GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAA 177
G++VH LK ++ ++ ALI+ YS S C A +VF+ + ++++SW MIA+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ A+ EAL F Q++ G P+ TF+ VLKAC GL
Sbjct: 122 Y-------------AENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKT 168
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH + K +E D + L+ Y RCG + + F M +D++ W+ ++ +A GQ
Sbjct: 169 VHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQ 228
Query: 298 AKEALQLFSNMN---VQPDSATFVSLLSA 323
+++AL++F M V P+ TF S+L A
Sbjct: 229 SEKALEIFCQMRRAFVIPNQFTFSSVLQA 257
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 22/248 (8%)
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
VF+ M RN +S+ ++I + +A ELFA++ E L F
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPF-------------V 48
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F+ VLK + VH + K G+ +T I ALI AY+ G +S++++VFD+++
Sbjct: 49 FTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEIS 108
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNK 335
D+VSW ++ +YA + EAL+ FS M V +P++ TF +L AC G
Sbjct: 109 SKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKT 168
Query: 336 VFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
V S+L+ + + D Y +++L R G +A + +MP + D + WS ++
Sbjct: 169 VHCSVLKTN---YERDLYVGVGLLELYTRCGDNDDAWRAFGDMP-KNDVIPWSFMISRFA 224
Query: 394 KHGETRLA 401
+ G++ A
Sbjct: 225 QSGQSEKA 232
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/588 (38%), Positives = 355/588 (60%), Gaps = 33/588 (5%)
Query: 15 CALHG--NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRN 72
CA G +I Q+H +I N ++FV+N L++ Y+K + DAR LFDEMP+++
Sbjct: 218 CANIGLDDIVLGQQIHSFVIKT--NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQD 275
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLI----SCDYLHGKLVHA 127
VS+ +ISGYA G + F LF L F +F A++L + D+ G+ +HA
Sbjct: 276 GVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 335
Query: 128 LALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ + D+ + V N+L++MY+K C +EA +F N+ R+ + W +MI+A+
Sbjct: 336 QTIVTTADSEILVGNSLVDMYAK-CGKFEEAEMIFTNLTHRSAVPWTAMISAY------- 387
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ EE L LF ++++ + D TF+ +L+A A + + +HS I K
Sbjct: 388 ------VQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS 441
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
GF + +AL+ YA+CGSI + Q F +M ++VSWN+++ AYA +G+A+ L+ F
Sbjct: 442 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 501
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M +QPDS +F+ +LSACSH+GLV+EG F+SM + + + P+ +HYA +VD+L R
Sbjct: 502 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCR 561
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQ 421
GR EAEKL+ EMP++PD ++WS +L +CR H LA AA +L +E D+ +V
Sbjct: 562 SGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVN 621
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
MSNIY +G + + K M+ V+K P SW+EI++ H F++ + HPQ E I KK
Sbjct: 622 MSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKK 681
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
++ L ++ +GY P+TS ALH+ +E+ K E L +HSE+LA+ FA+++ E S I
Sbjct: 682 IDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALIS----TPEGSPIL 737
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+MKN+R C+DCH +K+ S ++G+EI VRDS RFHHF+D CSC D+W
Sbjct: 738 VMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 217/525 (41%), Gaps = 109/525 (20%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
+G + QA QL E M + ++ TN +I+ Y K G L +AR LFD M +R V+WT
Sbjct: 60 NGELSQARQLFEKMPH------KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 113
Query: 78 ALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD--YLHGKL--VHALALKF 132
LI GY+Q +E F LF + + P+ + ++L C+ + ++ V +K
Sbjct: 114 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 173
Query: 133 SLDAHVYVANALINMYSKSCA-DEAWKVFENME--------------------------- 164
D+ + V N L++ Y KS D A ++F+ M
Sbjct: 174 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIH 233
Query: 165 --------FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE----------------- 199
NV N+++ + A +LF +M ++
Sbjct: 234 SFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHK 293
Query: 200 -ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
A LFR+LQ F+ +L + + +H+ + + ++ N+L+
Sbjct: 294 YAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLV 353
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
YA+CG ++ +F +T+ V W +++ AY G +E LQLF+ M +V D A
Sbjct: 354 DMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQA 413
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF SLL A + + G K HS + G + + + ++D+ + G I +A + +E
Sbjct: 414 TFASLLRASASIASLSLG-KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQE 472
Query: 376 MPMEPDSVIWSVLLGSCRKHGETR--LAELAATKLKQLEPGDSLGFV------------- 420
MP + + V W+ ++ + ++GE L L L+P DS+ F+
Sbjct: 473 MP-DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQP-DSVSFLGVLSACSHSGLVE 530
Query: 421 -------QMSNIY----------------CLSGSFNKARLIRKEM 442
M+ IY C SG FN+A + EM
Sbjct: 531 EGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEM 575
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 40/188 (21%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG- 296
+ + I K GF+ DT +N + + + G +S ++Q+F+KM + + VS N ++ Y G
Sbjct: 34 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93
Query: 297 ------------------------------QAKEALQLFSNM---NVQPDSATFVSLLSA 323
Q KEA +LF M +PD TFV+LLS
Sbjct: 94 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153
Query: 324 CSHAGLVQEGNKV--FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
C+ + GN++ + + G +L +VD + R+ A +L +EMP E D
Sbjct: 154 CNGHEM---GNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP-EID 209
Query: 382 SVIWSVLL 389
S ++ +L
Sbjct: 210 SFTFAAVL 217
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 354/614 (57%), Gaps = 37/614 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ ACA+ G+ + ++H+ D+FV N LI+ Y K ++ AR +FD
Sbjct: 166 VFLAAAKACAVSGDALRVKEVHDDATRC--GVMSDVFVGNALIHAYGKCKCVEGARRVFD 223
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLH 121
++ R+VVSWT+L S Y + G + +F + PN +++S+L +C D
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
GK +H A++ + +++V +AL+++Y+K + EA VF+ M R+V+SWN ++ A+
Sbjct: 284 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 343
Query: 181 CKLEAQAIELFAKMKNE----------------------EEALFLFRQLQREGMAPDWCT 218
K + LF KM + EEA+ +FR++Q+ G P+ T
Sbjct: 344 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 403
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
S +L AC+ R +H + ++ D AL++ YA+CG ++LS+ VFD M
Sbjct: 404 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 463
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+V+WN+++ A A+HG KEAL LF M VQP+S TF +LS CSH+ LV+EG +
Sbjct: 464 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 523
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+F+SM +H V P +HY+C+VD+ R GR+ EA K I+ MPMEP + W LL +CR +
Sbjct: 524 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVY 583
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
LA+++A KL ++EP + +V + NI + +++A +R MK + K PG SW
Sbjct: 584 KNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSW 643
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
+++ N+VH F G K + + + I+ L+EL+ ++K GY P+T L DI++E K E L
Sbjct: 644 LQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLC 703
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
+HSEKLA+ F I+N +S IR+ KN+RIC DCHN +K S ++G IVVRDS RF
Sbjct: 704 NHSEKLAVAFGILNLNG----QSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRF 759
Query: 576 HHFKDRICSCNDYW 589
HHFK+ CSC D W
Sbjct: 760 HHFKNGNCSCKDLW 773
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 153/303 (50%), Gaps = 22/303 (7%)
Query: 47 HLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN 106
LI + G + AR LFD +P+ + + + LIS HG + E +++ SL +
Sbjct: 103 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 162
Query: 107 EFSL-----ASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ + + +S D L K VH A + + + V+V NALI+ Y K C + A +VF
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 222
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+++ R+V+SW S+ + + C + ++ +FR++ G+ P+ T S
Sbjct: 223 DDLVVRDVVSWTSLSSCYVKCGFPRKGMD-------------VFREMGWSGVKPNPMTVS 269
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L ACA L + +H ++G + + +AL+ YA+C S+ ++ VFD M +
Sbjct: 270 SILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR 329
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+VSWN +L AY + + ++ LF M+ V+ D AT+ +++ C G +E ++F
Sbjct: 330 DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMF 389
Query: 338 HSM 340
M
Sbjct: 390 RKM 392
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 18/247 (7%)
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ A ++F+N+ + + +++I+A L +AI++++ LQ G+
Sbjct: 115 NRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYS-------------SLQERGIK 161
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD F KACA VH + G D + NALIHAY +C + +++V
Sbjct: 162 PDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV 221
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD + D+VSW S+ Y G ++ + +F M V+P+ T S+L AC+ +
Sbjct: 222 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 281
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ G ++ H HG+V L + +V L + + EA + MP D V W+ +L
Sbjct: 282 KSGKEI-HGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLT 339
Query: 391 SCRKHGE 397
+ K+ E
Sbjct: 340 AYFKNKE 346
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 296 GQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY-- 353
G A QLF N+ QPD T +L+SA + GL E K++ S L+ G+ P + +
Sbjct: 112 GDFNRARQLFDNIP-QPDPTTCSTLISALTTHGLSNEAIKIYSS-LQERGIKPDMPVFLA 169
Query: 354 ---ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
AC V G R+ E + D + + L+ + +G+ + E A
Sbjct: 170 AAKACAVS--GDALRVKEVHDDATRCGVMSDVFVGNALIHA---YGKCKCVEGARRVFDD 224
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
L D + + +S+ Y G K + +EM S V+ P
Sbjct: 225 LVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNP 265
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/595 (38%), Positives = 353/595 (59%), Gaps = 40/595 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGY---LDDARHLF 65
+++ AC G+++ QLH + D V+ L++MYAK ++ AR +F
Sbjct: 250 SSMISACTELGSVRLGQQLHSVALR--LGLVSDSCVSCGLVDMYAKLKMERSMEHARKVF 307
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEE-CFRLFCSLL-QYFFPNEFSLASVLISC----DY 119
MP+ NV+SWTALISGY Q G E LF +L + PN + +++L +C D
Sbjct: 308 KTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQ 367
Query: 120 LHGKLVHALALKFSLDAHV-YVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAA 177
G+ +HA LK S+ AHV V NAL++MY++S C +EA K F+ + N++S + +
Sbjct: 368 DSGRQIHAHVLKTSI-AHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDV-- 424
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ E +K++ ++ + F TF+ +L A A +
Sbjct: 425 ----ETERNNASCSSKIEGMDDGVSTF-------------TFASLLSAAASVGLLTKGQK 467
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+L K GF D I+N+L+ YARCG + + + FD+M H+++SW SI+ A HG
Sbjct: 468 LHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGY 527
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
AK+AL +F +M V+P+ T++++LSACSH GLV+EG + F SM ++HG++P+++HYA
Sbjct: 528 AKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYA 587
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VDLL R G + EA + I EMP + D+++W LL +CR +G T + E+AA + LEP
Sbjct: 588 CIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPR 647
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D +V +SN+Y +G +++ IR M+ + K GLSW+++ N +HEF +G HP
Sbjct: 648 DPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPL 707
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I+ KL LI ++K +GYVP+TS+ LHD+ EE KE+ L HSEK+A+ F ++ +
Sbjct: 708 AIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSA-- 765
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+R+C DCH+ +K S G+EI++RDSNRFH KD ICSC +YW
Sbjct: 766 --TKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 185/370 (50%), Gaps = 26/370 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V LI+M+A+ G L A+ +FD + +R V WT LI+ Y Q G A + LF +L
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 101 QYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK----S 151
F P+ +S++S++ +C L G+ +H++AL+ L + V+ L++MY+K
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+ A KVF+ M NV+SW ++I+ + ++ E + LFR++ E
Sbjct: 299 SMEHARKVFKTMPRHNVMSWTALISGYVQSGVQ------------ENNVMALFREMLNES 346
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P+ T+S +LKACA L + +H+ + K V+ NAL+ YA G + ++
Sbjct: 347 IRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEAR 406
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQ 331
+ FD++ +++S + ++ + ++ M+ + TF SLLSA + GL+
Sbjct: 407 KAFDQLYETNILSMSPDVETERNNASCSSKIE---GMDDGVSTFTFASLLSAAASVGLLT 463
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G K H++ G +V + R G + +A + EM + + + W+ ++
Sbjct: 464 KGQK-LHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMK-DHNVISWTSIISG 521
Query: 392 CRKHGETRLA 401
KHG + A
Sbjct: 522 LAKHGYAKQA 531
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 171/352 (48%), Gaps = 32/352 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A L + A G+++ LH ++ + + D V N L+ MY+K G ++ AR +FD+M
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILD-TDAVVANSLLTMYSKCGAVEAARRVFDQM 102
Query: 69 -PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC-----DYLH 121
R++VSWTA+ S A++G E RL +L+ PN F+L + +C L
Sbjct: 103 CGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLA 162
Query: 122 GKLVHALALKFSL-DAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G +V LK V V ALI+M++++ D A +VF+ + R + W +I +
Sbjct: 163 GGVVLGFVLKTGFWGTDVSVGCALIDMFARN-GDLVAAQRVFDGLIERTSVVWTLLITRY 221
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
++ +ELF M + +G PD + S ++ AC L + R +
Sbjct: 222 VQAGCASKVVELFLHMLD-------------DGFEPDGYSMSSMISACTELGSVRLGQQL 268
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCG---SISLSKQVFDKMTYHDLVSWNSILKAYALH 295
HS+ + G D+ ++ L+ YA+ S+ +++VF M H+++SW +++ Y
Sbjct: 269 HSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQS 328
Query: 296 G-QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
G Q + LF M +++P+ T+ +LL AC++ G ++ +L+
Sbjct: 329 GVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKT 380
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 165/346 (47%), Gaps = 45/346 (13%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L ACA + Q+H H++ V N L++MYA+ G +++AR FD+
Sbjct: 354 YSNLLKACANLSDQDSGRQIHAHVLKTSIAHVN--VVGNALVSMYAESGCMEEARKAFDQ 411
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL----HGK 123
+ + N++S + + N C + + F+ AS+L + + G+
Sbjct: 412 LYETNILSMSPDVE---TERNNASCSSKIEGMDDGV--STFTFASLLSAAASVGLLTKGQ 466
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HAL++K + ++N+L++MY++ C ++A + F+ M+ NVISW S+I+
Sbjct: 467 KLHALSMKAGFRSDQGISNSLVSMYAR-CGYLEDACRAFDEMKDHNVISWTSIISG---- 521
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE-----RH 234
AK ++AL +F + G+ P+ T+ VL AC+ GLV E R
Sbjct: 522 ---------LAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRS 572
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYA 293
H L+ + E I + L AR G + ++Q ++M D + W ++L A
Sbjct: 573 MQKDHGLLPR--MEHYACIVDLL----ARSGLVEEARQFINEMPCKADALVWKTLLSACR 626
Query: 294 LHGQAKEALQLFSN--MNVQP-DSATFVSLLSACSHAGLVQEGNKV 336
+G E ++ +N +N++P D A +V L + + AGL E ++
Sbjct: 627 TYGNT-EIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARI 671
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALHGQAKEALQ-- 303
+ D V+AN+L+ Y++CG++ +++VFD+M DLVSW ++ A +G +E+L+
Sbjct: 72 LDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLL 131
Query: 304 -LFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-MVDLLG 361
+ ++P++ T + AC L + V + G C ++D+
Sbjct: 132 GEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFA 191
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLL 389
R G ++ A+++ + +E SV+W++L+
Sbjct: 192 RNGDLVAAQRVFDGL-IERTSVVWTLLI 218
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 354/614 (57%), Gaps = 37/614 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ ACA+ G+ + ++H+ D+FV N LI+ Y K ++ AR +FD
Sbjct: 80 VFLAAAKACAVSGDALRVKEVHDDATRC--GVMSDVFVGNALIHAYGKCKCVEGARRVFD 137
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLH 121
++ R+VVSWT+L S Y + G + +F + PN +++S+L +C D
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
GK +H A++ + +++V +AL+++Y+K + EA VF+ M R+V+SWN ++ A+
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 257
Query: 181 CKLEAQAIELFAKMKNE----------------------EEALFLFRQLQREGMAPDWCT 218
K + LF KM + EEA+ +FR++Q+ G P+ T
Sbjct: 258 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 317
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
S +L AC+ R +H + ++ D AL++ YA+CG ++LS+ VFD M
Sbjct: 318 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 377
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+V+WN+++ A A+HG KEAL LF M VQP+S TF +LS CSH+ LV+EG +
Sbjct: 378 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 437
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+F+SM +H V P +HY+C+VD+ R GR+ EA K I+ MPMEP + W LL +CR +
Sbjct: 438 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVY 497
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
LA+++A KL ++EP + +V + NI + +++A +R MK + K PG SW
Sbjct: 498 KNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSW 557
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
+++ N+VH F G K + + + I+ L+EL+ ++K GY P+T L DI++E K E L
Sbjct: 558 LQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLC 617
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
+HSEKLA+ F I+N +S IR+ KN+RIC DCHN +K S ++G IVVRDS RF
Sbjct: 618 NHSEKLAVAFGILNLNG----QSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRF 673
Query: 576 HHFKDRICSCNDYW 589
HHFK+ CSC D W
Sbjct: 674 HHFKNGNCSCKDLW 687
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 153/303 (50%), Gaps = 22/303 (7%)
Query: 47 HLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN 106
LI + G + AR LFD +P+ + + + LIS HG + E +++ SL +
Sbjct: 17 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 76
Query: 107 EFSL-----ASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ + + +S D L K VH A + + + V+V NALI+ Y K C + A +VF
Sbjct: 77 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+++ R+V+SW S+ + + C + ++ +FR++ G+ P+ T S
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMD-------------VFREMGWSGVKPNPMTVS 183
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L ACA L + +H ++G + + +AL+ YA+C S+ ++ VFD M +
Sbjct: 184 SILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR 243
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+VSWN +L AY + + ++ LF M+ V+ D AT+ +++ C G +E ++F
Sbjct: 244 DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMF 303
Query: 338 HSM 340
M
Sbjct: 304 RKM 306
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 18/247 (7%)
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ A ++F+N+ + + +++I+A L +AI++++ LQ G+
Sbjct: 29 NRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYS-------------SLQERGIK 75
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD F KACA VH + G D + NALIHAY +C + +++V
Sbjct: 76 PDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV 135
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD + D+VSW S+ Y G ++ + +F M V+P+ T S+L AC+ +
Sbjct: 136 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 195
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ G ++ H HG+V L + +V L + + EA + MP D V W+ +L
Sbjct: 196 KSGKEI-HGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLT 253
Query: 391 SCRKHGE 397
+ K+ E
Sbjct: 254 AYFKNKE 260
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 296 GQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY-- 353
G A QLF N+ QPD T +L+SA + GL E K++ S L+ G+ P + +
Sbjct: 26 GDFNRARQLFDNIP-QPDPTTCSTLISALTTHGLSNEAIKIYSS-LQERGIKPDMPVFLA 83
Query: 354 ---ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
AC V G R+ E + D + + L+ +G+ + E A
Sbjct: 84 AAKACAVS--GDALRVKEVHDDATRCGVMSDVFVGNALI---HAYGKCKCVEGARRVFDD 138
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
L D + + +S+ Y G K + +EM S V+ P
Sbjct: 139 LVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNP 179
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/547 (39%), Positives = 324/547 (59%), Gaps = 58/547 (10%)
Query: 51 MYAKF---GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLLQYFFPN 106
MYAK G +DD+R +F++MP+ NV+SWTA+I+ Y Q G + E LFC ++
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI------ 54
Query: 107 EFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEF 165
S ++C V N+LI+MY++S ++A K F+ +
Sbjct: 55 -----SASVNC----------------------VGNSLISMYARSGRMEDARKAFDILFE 87
Query: 166 RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
+N++S+N+++ + AK EEA LF ++ G+ TF+ +L
Sbjct: 88 KNLVSYNAIVDGY-------------AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 134
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
A + +H + K G++ + I NALI Y+RCG+I + QVF++M +++SW
Sbjct: 135 AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 194
Query: 286 NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
S++ +A HG A AL++F M +P+ T+V++LSACSH G++ EG K F+SM +
Sbjct: 195 TSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 254
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
HG+VP+++HYACMVDLLGR G ++EA + I MP+ D+++W LLG+CR HG T L
Sbjct: 255 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGR 314
Query: 403 LAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
AA + + EP D ++ +SN++ +G + IRK MK + K G SWIE+ENRV
Sbjct: 315 HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 374
Query: 463 HEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLA 522
H F G HPQ I+++L++L ++K MGY+P+T LHDIEEE KE+ L+ HSEK+A
Sbjct: 375 HRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIA 434
Query: 523 LVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRI 582
+ F +++ + IRI KN+R+C DCH +K S G+EIVVRDSNRFHH K+ +
Sbjct: 435 VAFGLISTS----QSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGV 490
Query: 583 CSCNDYW 589
CSCNDYW
Sbjct: 491 CSCNDYW 497
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 166/335 (49%), Gaps = 36/335 (10%)
Query: 22 KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALIS 81
K+A++L MI+ N V N LI+MYA+ G ++DAR FD + ++N+VS+ A++
Sbjct: 44 KEAIELFCKMISASVN-----CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVD 98
Query: 82 GYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYL----HGKLVHALALKFSLDA 136
GYA++ +EE F LF + + F+ AS+L + G+ +H LK +
Sbjct: 99 GYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKS 158
Query: 137 HVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
+ + NALI+MYS+ C + A++VF ME RNVISW SMI F +A+E+F KM
Sbjct: 159 NQCICNALISMYSR-CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 217
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTV 252
G P+ T+ VL AC+ G+++E +S+ ++G
Sbjct: 218 -------------LETGTKPNEITYVAVLSACSHVGMISEGQKH-FNSMYKEHGIVPRME 263
Query: 253 IANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALHGQ---AKEALQLFSNM 308
++ R G + + + + M D + W ++L A +HG + A ++ +
Sbjct: 264 HYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMI--L 321
Query: 309 NVQPDS-ATFVSLLSACSHAGLVQEGNKVFHSMLE 342
+PD A ++ L + + AG ++ K+ SM E
Sbjct: 322 EQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKE 356
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+L A G + + Q+H ++ Q + N LI+MY++ G ++ A +F+E
Sbjct: 128 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ--CICNALISMYSRCGNIEAAFQVFNE 185
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL 120
M RNV+SWT++I+G+A+HG A +F +L+ PNE + +VL +C ++
Sbjct: 186 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 239
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/591 (38%), Positives = 344/591 (58%), Gaps = 32/591 (5%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNE------PQDLFVTNHLINMYAKFGYLDDARHLFDE 67
C LH + +QA++L M + DLFV+ L++MY+K L+DAR F+
Sbjct: 333 GCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNL 392
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----G 122
+P++++++W A+ISGY+Q+ E LF + + N+ +L+++L S L
Sbjct: 393 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 452
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ VH L++K + +YV N+LI+ Y K S ++A ++FE +++S+ SMI A+
Sbjct: 453 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY--- 509
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ EEAL LF ++Q + PD S +L ACA L +H
Sbjct: 510 ----------AQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVH 559
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I KYGF D N+L++ YA+CGSI + + F ++T +VSW++++ A HG ++A
Sbjct: 560 ILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQA 619
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQLF+ M V P+ T VS+L AC+HAGLV E F SM E G P +HYACM+D
Sbjct: 620 LQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMID 679
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G+I EA +L+ +MP E ++ +W LLG+ R H + L AA L LEP S
Sbjct: 680 LLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGT 739
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
V ++NIY +G + +R+ M+ S+V+K PG+SWIE++++V+ F G + H + + I
Sbjct: 740 HVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEI 799
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ KL+EL + GYVP + LHD+E+ KE LYHHSEKLA+ F ++ + +
Sbjct: 800 YAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIAT----PQGA 855
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+CVDCH K ++ +EI+VRD NRFHHFKD CSC DYW
Sbjct: 856 PIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 172/326 (52%), Gaps = 31/326 (9%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAK---FG 56
F ++ Y+ L C +++ +Q+H H+ + ++P + NHLIN+Y+K FG
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPS---IRNHLINLYSKCRXFG 108
Query: 57 YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLI 115
Y AR L DE + ++VSW+ALISGYAQ+G F + L NEF+ +SVL
Sbjct: 109 Y---ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165
Query: 116 SC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVI 169
+C D GK VH + + + V+VAN L+ MY+K C + ++ ++F+ + RNV+
Sbjct: 166 ACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAK-CDEFLDSKRLFDEIPERNVV 224
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SWN++ + + +A+ LF +M G+ P+ + S ++ AC GL
Sbjct: 225 SWNALFSCYVQXDFCGEAVGLFYEM-------------VLSGIKPNEFSLSSMVNACTGL 271
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+H + K G++ D ANAL+ YA+ G ++ + VF+K+ D+VSWN+++
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVI 331
Query: 290 KAYALHGQAKEALQLFSNMNVQPDSA 315
LH ++AL+L M Q S+
Sbjct: 332 AGCVLHEHHEQALELLGQMKRQLHSS 357
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
F P S + +L C G +HA K L + N LIN+YSK A
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYAR 111
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K+ + +++SW+++I+ + L A L F ++ G+ +
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGA-------------LMAFHEMHLLGVKCNEF 158
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
TFS VLKAC+ + R VH ++ GFE D +AN L+ YA+C SK++FD++
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
++VSWN++ Y EA+ LF M ++P+ + S+++AC+ G
Sbjct: 219 PERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG- 277
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
K+ H L G +VD+ +VG + +A + ++ +PD V W+ ++ C
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVL 336
Query: 395 H 395
H
Sbjct: 337 H 337
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++L +ACA +Q QLH H++ D+F N L+NMYAK G +DDA F
Sbjct: 536 VCSSLLNACANLSAFEQGKQLHVHILKY--GFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 593
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
E+ +R +VSW+A+I G AQHG+ + +LF +L + PN +L SVL +C+ H LV
Sbjct: 594 ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACN--HAGLV 651
Query: 126 HALALKFSLDAHVYVANALINMYS--------KSCADEAWKVFENMEFR-NVISWNSMIA 176
L F ++ + Y+ +EA ++ M F N W +++
Sbjct: 652 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 711
Query: 177 AFR 179
A R
Sbjct: 712 AAR 714
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
K + I+ + + + + + + P ++S +L C + R +H+
Sbjct: 22 KPAPKLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAH 81
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K G DD I N LI+ Y++C ++++ D+ + DLVSW++++ YA +G A
Sbjct: 82 ITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGA 141
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L F M V+ + TF S+L ACS ++ G +V H ++ G + +V
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV-HGVVVVSGFEGDVFVANTLVV 200
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ + L++++L E+P E + V W+ L SC
Sbjct: 201 MYAKCDEFLDSKRLFDEIP-ERNVVSWNALF-SC 232
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/561 (37%), Positives = 342/561 (60%), Gaps = 26/561 (4%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
E D FV + L++MYAKF + DA +F + +++VV +TALI GYAQHG E ++F
Sbjct: 133 EVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFE 192
Query: 98 SLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-S 151
++ PNE++LA +LI+C D ++G+L+H L +K L++ V +L+ MYS+ +
Sbjct: 193 DMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCN 252
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+++ KVF +++ N ++W S + + EE A+ +FR++ R
Sbjct: 253 MIEDSIKVFNQLDYANQVTWTSFVVGL-------------VQNGREEVAVSIFREMIRCS 299
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
++P+ T S +L+AC+ L +H++ K G + + ALI+ Y +CG++ ++
Sbjct: 300 ISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKAR 359
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAG 328
VFD +T D+V+ NS++ AYA +G EAL+LF NM + P+ TF+S+L AC++AG
Sbjct: 360 SVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAG 419
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV+EG ++F S+ NH + +DH+ CM+DLLGR R+ EA LI E+ PD V+W L
Sbjct: 420 LVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTL 478
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L SC+ HGE +AE +K+ +L PGD + ++N+Y +G +N+ ++ ++ +++
Sbjct: 479 LNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLK 538
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K P +SW++++ VH F +G HP+ IF+ L L+ ++K +GY P T L D++EE
Sbjct: 539 KSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEE 598
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K LY+HSEKLA+ +A+ + IRI KN+R+C DCH+++K S L G++I+
Sbjct: 599 KKISSLYYHSEKLAIAYALWKT---IGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDII 655
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
RDS RFHHFK +CSC DYW
Sbjct: 656 ARDSKRFHHFKGGLCSCKDYW 676
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 177/340 (52%), Gaps = 24/340 (7%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQ 101
F+ + LI+ Y K G L +AR LFDE+P R++V+W ++IS + HG ++E + + L++
Sbjct: 36 FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLME 95
Query: 102 YFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDA-HVYVANALINMYSK-SCADE 155
P+ ++ +++ + L HG+ H LA+ L+ +VA+AL++MY+K +
Sbjct: 96 GVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRD 155
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A VF + ++V+ + ++I + L+ +A+++F M N G+ P+
Sbjct: 156 AHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVN-------------RGVKPN 202
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T + +L C L + +H L+ K G E +L+ Y+RC I S +VF+
Sbjct: 203 EYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFN 262
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
++ Y + V+W S + +G+ + A+ +F M ++ P+ T S+L ACS +++
Sbjct: 263 QLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEV 322
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
G ++ H++ G+ A +++L G+ G + +A +
Sbjct: 323 GEQI-HAITMKLGLDGNKYAGAALINLYGKCGNMDKARSV 361
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/614 (37%), Positives = 348/614 (56%), Gaps = 47/614 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + ACA +++ QLH +I N P+ D +V + L+ +YAK G +A+ +
Sbjct: 290 STTYTSSLTACARLSSLRWGKQLHAQVIRNLPH--IDPYVASALVELYAKSGCFKEAKGV 347
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DY 119
F+ + RN V+WT LISG+ Q+G E LF + ++F+LA+++ C D
Sbjct: 348 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 407
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
G+ +H+L LK V V+N+LI+MY+K C + A +F M ++++SW SMI A
Sbjct: 408 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAK-CDNLQSAEAIFRFMNEKDIVSWTSMITA 466
Query: 178 FRACKLEAQAIELFAKM--KN----------------EEEALFLFR-QLQREGMAPDWCT 218
+ A+A E F M KN EE+ L +++ L E + PDW T
Sbjct: 467 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 526
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+ + K CA L + + K G DT +ANA+I Y++CG I +++VFD +
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 586
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSWN+++ Y+ HG K+A+++F ++ +PD ++V++LS CSH+GLVQEG
Sbjct: 587 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 646
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F M H + P L+H++CMVDLLGR G + EA+ LI +MPM+P + +W LL +C+ H
Sbjct: 647 YFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIH 706
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
G LAELAA + +L+ DS ++ M+ IY +G + + IRK M+ ++K PG SW
Sbjct: 707 GNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSW 766
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
+E++N+VH F + HPQ AI KKL+EL+ ++ +GYV S
Sbjct: 767 MEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDS-----------TRSEI 815
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HHSEKLA+ F +M + I IMKN+RIC DCH +KL S + G+E V+RD+ RF
Sbjct: 816 HHSEKLAVAFGLMTLPTWMP----IHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRF 871
Query: 576 HHFKDRICSCNDYW 589
HHF CSC DYW
Sbjct: 872 HHFNGGSCSCGDYW 885
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 189/415 (45%), Gaps = 35/415 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL HA G + A +L I + PN + N ++N YAK G L DA LF MP
Sbjct: 64 TLLHAYLSCGALSDARRLLLMDIAH-PN----VITHNVMLNGYAKLGRLSDAVELFGRMP 118
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL--HGKLV 125
R+V SW L+SGY Q F S+ + +PN F+LA + SC L H +
Sbjct: 119 ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLAL 178
Query: 126 HALAL--KFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
LA+ KF VA AL++M+ + A D A ++F ++ + NSM+A +
Sbjct: 179 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 238
Query: 183 LEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLK 224
A+ELF M + EAL + +Q +G+ D T++ L
Sbjct: 239 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 298
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA L + R +H+ + + D +A+AL+ YA+ G +K VF+ + + V+
Sbjct: 299 ACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA 358
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W ++ + +G E+++LF+ M + D +L+S C + G ++ HS+
Sbjct: 359 WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL-HSLC 417
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G + + ++ + + + AE + R M E D V W+ ++ + + G
Sbjct: 418 LKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMITAYSQVG 471
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ-VFDKM 277
F+ L++C A A+H + G + N L+HAY CG++S +++ + +
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+ ++++ N +L YA G+ +A++LF M + D A++ +L+S + + F
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR-DVASWNTLMSGYFQSRQYLVSLETF 145
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVG---RILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
SM + P AC + G +G L+ ++++ + DS + + L+ +
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205
Query: 395 HGETRLAELAATKLKQ 410
G LA ++K+
Sbjct: 206 CGAVDLASRLFVRIKE 221
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 335/572 (58%), Gaps = 40/572 (6%)
Query: 41 DLFVTNHLINMYAKFG--------------YLDDARHLFDEMPKRNVVSWTALISGYAQH 86
D F N L+N+Y K L+ R +FDEMP+++VVSW L+ G A+
Sbjct: 92 DRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAES 151
Query: 87 GNAEECFRLFCSLLQYFF-PNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVA 141
G E L + + P+ F+L+SVL D G +H A + V+V
Sbjct: 152 GRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVG 211
Query: 142 NALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
++LI+MY+ D + KVF+N+ R+ I WNSM+A C A+ + +EA
Sbjct: 212 SSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAG---C----------AQNGSVDEA 258
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LFR++ G+ P TFS ++ AC L + +H+ + + GF+ + I+++LI
Sbjct: 259 LGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDM 318
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
Y +CG++S+++++FD++ D+VSW +++ +ALHG A+EAL LF M N++P+ TF
Sbjct: 319 YCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITF 378
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
+++L+ACSHAGLV +G K F+SM +++G+VP L+H+A + D LGR G++ EA I M
Sbjct: 379 LAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMK 438
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
++P + +WS LL +C+ H T LAE A K+ LEP + +SN Y SG +N+A
Sbjct: 439 IKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAH 498
Query: 438 IRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPE 497
+RK M+ ++K P SWIE++N+ H F + K HP E I L Q+ GYVP
Sbjct: 499 LRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPN 558
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T DIEEE K L HSEKLA+VF I++ + IR+MKN+R+CVDCH K
Sbjct: 559 TDDVFQDIEEEQKNSVLCGHSEKLAIVFGIIST----PPGTTIRVMKNLRVCVDCHTVTK 614
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++G+EIV+RD+NRFHHFKD ICSC D+W
Sbjct: 615 FISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 147/329 (44%), Gaps = 39/329 (11%)
Query: 109 SLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA----------- 153
SL L SC L G +HALAL+ A + ANAL+N+Y K A
Sbjct: 60 SLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGS 119
Query: 154 ----DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+ KVF+ M ++V+SWN+++ C A+ EAL L R++ R
Sbjct: 120 AVVLESVRKVFDEMPEKDVVSWNTLVL---GC----------AESGRHGEALGLVREMWR 166
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+G PD T S VL A R +H + GF DD + ++LI YA C
Sbjct: 167 DGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDY 226
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
S +VFD + D + WNS+L A +G EAL LF M ++P TF SL+ AC +
Sbjct: 227 SVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGN 286
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+ G K H+ + G + + ++D+ + G + A ++ + PD V W+
Sbjct: 287 LASLLLG-KQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRI-QSPDIVSWT 344
Query: 387 VLLGSCRKHGETR--LAELAATKLKQLEP 413
++ HG R L +L L+P
Sbjct: 345 AMIMGHALHGPAREALVLFDRMELGNLKP 373
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/593 (38%), Positives = 345/593 (58%), Gaps = 32/593 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF---DE 67
HAC +++ +LH H++ + ++ + LI +Y+ G +++AR +F DE
Sbjct: 76 FLHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDE 135
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHG 122
P V W A+ GY+++G + E L+ +L P F+ + L +C + L G
Sbjct: 136 KPPEEPV-WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVG 194
Query: 123 KLVHALALKFSL-DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA +K + +A V NAL+ +Y + C DE KVFE M RNV+SWN++IA F
Sbjct: 195 RAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGF-- 252
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A +F E L FR +QREGM W T + +L CA + +H
Sbjct: 253 ----AGQGRVF-------ETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHG 301
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I K D + N+L+ YA+CG I ++VFD+M DL SWN++L ++++GQ E
Sbjct: 302 QILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHE 361
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL LF M ++P+ TFV+LLS CSH+GL EG ++F +++++ GV P L+HYAC+V
Sbjct: 362 ALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLV 421
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR G+ EA + +PM P IW LL SCR +G LAE+ A +L ++EP +
Sbjct: 422 DILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPG 481
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SNIY +G + + +R+ M + ++K G SWI+I++++H F +GG + A
Sbjct: 482 NYVMLSNIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSA 541
Query: 478 IFKKL-EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
+KK+ EL +K +GYVP T + LHDI EE K + HSE+LA VFA++N G+
Sbjct: 542 EYKKIWNELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGA---- 597
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+CVDCH++MK S + + IV+RD+NRFHHF++ CSC DYW
Sbjct: 598 GMPIRITKNLRVCVDCHSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/593 (39%), Positives = 331/593 (55%), Gaps = 32/593 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ ACA G Q+H M+ + D FV L++MYAK G+LDDAR +FD M
Sbjct: 310 SSVLKACAGAGAFNLGRQIHGFMVKAVAD--FDEFVAVGLVDMYAKHGFLDDARKVFDFM 367
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP---NEFSLASVLISCD----YLH 121
P+R+++ W ALISG + G E LF + + N +LASVL S H
Sbjct: 368 PRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICH 427
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFR 179
+ VHALA K L + +V N LI+ Y K C D A KVF+ ++IS +M+ A
Sbjct: 428 TRQVHALAEKIGLLSDSHVINGLIDSYWK-CGQLDYAIKVFKESRSDDIISSTTMMTALS 486
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C + E+A+ LF Q+ R+G+ PD S +L AC L VH
Sbjct: 487 QCD-------------HGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVH 533
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K F D NAL++AYA+CGSI + F + +VSW++++ A HG K
Sbjct: 534 AHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGK 593
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
AL LF M V P+ T S+LSAC+HAGLV + K F SM E G+ +HYACM
Sbjct: 594 RALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACM 653
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
+D+LGR G++ +A +L+ MP + ++ +W LLG+ R H + L +AA KL LEP S
Sbjct: 654 IDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKS 713
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V ++N Y +G +++ +RK MK S V+K P +SW+EI+++VH F G K HP
Sbjct: 714 GTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTR 773
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ KL EL + GYVP + LHD++ KE L HHSE+LA+ FA+++ S
Sbjct: 774 DIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPS---- 829
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+RIC DCH K S ++ +EI++RD NRFHHF + CSC DYW
Sbjct: 830 GAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 189/371 (50%), Gaps = 36/371 (9%)
Query: 45 TNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF 104
+NHL+ +Y++ AR +FDE+P VSW++L++ Y+ +G + F ++
Sbjct: 40 SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGV 99
Query: 105 P-NEFSLASVL-ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
P NEF+L VL + D G VHALA+ L V+VANAL+ +Y DEA ++F+
Sbjct: 100 PCNEFALPVVLKCAPDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFD 159
Query: 162 NMEF----RNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPD 215
RN +SWN+MI+A+ +KN++ +A+ +FR++ G P+
Sbjct: 160 EYVGVGGERNAVSWNTMISAY---------------VKNDQSGDAIGVFREMVWSGERPN 204
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
FS V+ AC G VH + + G+E D ANAL+ Y++ G I ++ VF+
Sbjct: 205 EFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFE 264
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
KM D+VSWN+ + HG AL+L M + P+ T S+L AC+ AG
Sbjct: 265 KMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNL 324
Query: 333 GNKVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G ++ M++ V D + +VD+ + G + +A K+ MP D ++W+ L+
Sbjct: 325 GRQIHGFMVK---AVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR-DLILWNALIS 380
Query: 391 SCR---KHGET 398
C +HGE
Sbjct: 381 GCSHDGRHGEV 391
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 203/405 (50%), Gaps = 28/405 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ + +AC +++ Q+H ++ +D+F N L++MY+K G ++ A +F++
Sbjct: 208 FSCVVNACTGSRDLEAGRQVHGAVVRT--GYEKDVFTANALVDMYSKLGDIEMAATVFEK 265
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
MP +VVSW A ISG HG+ L + PN F+L+SVL +C + G
Sbjct: 266 MPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLG 325
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K D +VA L++MY+K D+A KVF+ M R++I WN++I+ C
Sbjct: 326 RQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALIS---GC 382
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD--WCTFSIVLKACAGLVTERHASAVH 239
+ + E L LF ++++EG+ D T + VLK+ A H VH
Sbjct: 383 SHDGR----------HGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVH 432
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+L K G D+ + N LI +Y +CG + + +VF + D++S +++ A + +
Sbjct: 433 ALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGE 492
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+A++LF M ++PDS SLL+AC+ ++G +V H+ L + +
Sbjct: 493 DAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQV-HAHLIKRQFTSDVFAGNAL 551
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V + G I +A+ +P E V WS ++G +HG + A
Sbjct: 552 VYAYAKCGSIEDADMAFSGLP-ERGIVSWSAMIGGLAQHGHGKRA 595
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 189/393 (48%), Gaps = 36/393 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEM----PKRNVVSWTALISGYAQHGNAEECFRL 95
D+FV N L+ +Y FG +D+AR +FDE +RN VSW +IS Y ++ + + +
Sbjct: 133 HDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGV 192
Query: 96 FCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK 150
F ++ PNEF + V+ +C D G+ VH ++ + V+ ANAL++MYSK
Sbjct: 193 FREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSK 252
Query: 151 SCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
E A VFE M +V+SWN+ I+ + +A+EL +MK+
Sbjct: 253 LGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS------------ 300
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
G+ P+ T S VLKACAG +H + K + D +A L+ YA+ G +
Sbjct: 301 -GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDD 359
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSAC 324
+++VFD M DL+ WN+++ + G+ E L LF M ++ + T S+L +
Sbjct: 360 ARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKST 419
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ + + +V H++ E G++ ++D + G++ A K+ +E D +I
Sbjct: 420 ASSEAICHTRQV-HALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE--SRSDDII 476
Query: 385 WSVL----LGSCRKHGETRLAELAATKLKQLEP 413
S L C HGE + K LEP
Sbjct: 477 SSTTMMTALSQC-DHGEDAIKLFVQMLRKGLEP 508
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++L +AC +Q Q+H H+I D+F N L+ YAK G ++DA F
Sbjct: 512 VLSSLLNACTSLSAYEQGKQVHAHLIKR--QFTSDVFAGNALVYAYAKCGSIEDADMAFS 569
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
+P+R +VSW+A+I G AQHG+ + LF +L + PN +L SVL +C+ H LV
Sbjct: 570 GLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACN--HAGLV 627
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIA 176
++ F +D +I++ ++ ++A ++ NM F+ N W +++
Sbjct: 628 DDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLG 687
Query: 177 AFR 179
A R
Sbjct: 688 ASR 690
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/614 (37%), Positives = 348/614 (56%), Gaps = 47/614 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + ACA +++ QLH +I N P+ D +V + L+ +YAK G +A+ +
Sbjct: 270 STTYTSSLTACARLSSLRWGKQLHAQVIRNLPH--IDPYVASALVELYAKSGCFKEAKGV 327
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DY 119
F+ + RN V+WT LISG+ Q+G E LF + ++F+LA+++ C D
Sbjct: 328 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
G+ +H+L LK V V+N+LI+MY+K C + A +F M ++++SW SMI A
Sbjct: 388 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAK-CDNLQSAEAIFRFMNEKDIVSWTSMITA 446
Query: 178 FRACKLEAQAIELFAKM--KN----------------EEEALFLFR-QLQREGMAPDWCT 218
+ A+A E F M KN EE+ L +++ L E + PDW T
Sbjct: 447 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 506
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+ + K CA L + + K G DT +ANA+I Y++CG I +++VFD +
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 566
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSWN+++ Y+ HG K+A+++F ++ +PD ++V++LS CSH+GLVQEG
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 626
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F M H + P L+H++CMVDLLGR G + EA+ LI +MPM+P + +W LL +C+ H
Sbjct: 627 YFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIH 686
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
G LAELAA + +L+ DS ++ M+ IY +G + + IRK M+ ++K PG SW
Sbjct: 687 GNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSW 746
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
+E++N+VH F + HPQ AI KKL+EL+ ++ +GYV S
Sbjct: 747 MEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDS-----------TRSEI 795
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HHSEKLA+ F +M + I IMKN+RIC DCH +KL S + G+E V+RD+ RF
Sbjct: 796 HHSEKLAVAFGLMTLPTWMP----IHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRF 851
Query: 576 HHFKDRICSCNDYW 589
HHF CSC DYW
Sbjct: 852 HHFNGGSCSCGDYW 865
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 189/415 (45%), Gaps = 35/415 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL HA G + A +L I + PN + N ++N YAK G L DA LF MP
Sbjct: 44 TLLHAYLSCGALSDARRLLLMDIAH-PN----VITHNVMLNGYAKLGRLSDAVELFGRMP 98
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL--HGKLV 125
R+V SW L+SGY Q F S+ + +PN F+LA + SC L H +
Sbjct: 99 ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLAL 158
Query: 126 HALAL--KFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
LA+ KF VA AL++M+ + A D A ++F ++ + NSM+A +
Sbjct: 159 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 218
Query: 183 LEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLK 224
A+ELF M + EAL + +Q +G+ D T++ L
Sbjct: 219 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 278
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA L + R +H+ + + D +A+AL+ YA+ G +K VF+ + + V+
Sbjct: 279 ACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA 338
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W ++ + +G E+++LF+ M + D +L+S C + G ++ HS+
Sbjct: 339 WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL-HSLC 397
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G + + ++ + + + AE + R M E D V W+ ++ + + G
Sbjct: 398 LKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMITAYSQVG 451
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ-VFDKM 277
F+ L++C A A+H + G + N L+HAY CG++S +++ + +
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+ ++++ N +L YA G+ +A++LF M + D A++ +L+S + + F
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR-DVASWNTLMSGYFQSRQYLVSLETF 125
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVG---RILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
SM + P AC + G +G L+ ++++ + DS + + L+ +
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185
Query: 395 HGETRLAELAATKLKQ 410
G LA ++K+
Sbjct: 186 CGAVDLASRLFVRIKE 201
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/585 (38%), Positives = 336/585 (57%), Gaps = 49/585 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ N++ +Q+H+ ++ +LF+ N L+ MY K G L +AR + D+
Sbjct: 140 FPCVLKACSGLDNLRVGLQVHDAIVK--VGLDTNLFIGNALVAMYGKCGCLREARKVLDQ 197
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
MP R+VVSW ++++GYAQ G ++ + C + S+ ++ D +
Sbjct: 198 MPYRDVVSWNSMVAGYAQSGQFDDALEI-CK----------EMDSLNLNHDAGTMASLSP 246
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
+ SL+ Y+ N +FE M +N+ISWN MI A
Sbjct: 247 VVCYTSLENVQYIHN----------------MFERMTKKNLISWNVMI-----------A 279
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I + M NE +LFL Q++ GM PD T + +L AC L +H I K
Sbjct: 280 IYVNNSMPNEAVSLFL--QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNL 337
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ + ++ NAL+ YA+CG + ++ VFDKM D+VSW S++ AY GQ +A+ LF+
Sbjct: 338 QPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAK 397
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M PDS FVS+LSACSH GL+ +G F M E +G+VP+++H+ACMVDL GR G
Sbjct: 398 MLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAG 457
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
+ EA I++MPMEP+ +W LL +CR H + + +AA L QL P S +V +SN
Sbjct: 458 EVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSN 517
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
IY +G + +R MK ++K PG+S +E+ +VH F +G + HPQ + I+ +L+
Sbjct: 518 IYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDV 577
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
L+G++K +GY+P+T ALHD+E E KE L HSEKLA+VFAI+N ++ + IRI K
Sbjct: 578 LVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNT----KQGTPIRITK 633
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N+R+C DCH +KL S ++ + I+VRD NRFHHF + ICSC DYW
Sbjct: 634 NLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 166/371 (44%), Gaps = 39/371 (10%)
Query: 93 FRLFCSLLQYFFPN----EFSLASVLISCDYLHG-KLVHALALKFSLDAHVYV----ANA 143
FR F SL + F FS + + D G K ++ L K ++ H+ + A
Sbjct: 17 FRGFVSLTRIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIK 76
Query: 144 LINMYS-KSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
L+ YS + A +F+ +NV+ +N MI ++ L EAL
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYV-------------EALS 123
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+F+ + PD TF VLKAC+GL R VH I K G + + I NAL+ Y
Sbjct: 124 IFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYG 183
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL---FSNMNVQPDSATFVS 319
+CG + +++V D+M Y D+VSWNS++ YA GQ +AL++ ++N+ D+ T S
Sbjct: 184 KCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS 243
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP-- 377
L + L E + H+M E L + M+ + EA L +M
Sbjct: 244 LSPVVCYTSL--ENVQYIHNMFERM-TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEEC 300
Query: 378 -MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN----IYCLSGSF 432
M+PD+V + LL +C G+ L K +E G+ + + N +Y G
Sbjct: 301 GMKPDAVTIASLLPAC---GDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCL 357
Query: 433 NKARLIRKEMK 443
+AR + +M+
Sbjct: 358 EEARDVFDKMR 368
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/601 (36%), Positives = 350/601 (58%), Gaps = 24/601 (3%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ AC+ ++ ++H + + + ++ FV + L++MY G ++ R +FD
Sbjct: 219 FASVLPACSHLDLLRTGKEIHAYALRT-DDVIENSFVGSALVDMYCNCGQVESGRLVFDS 277
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNEFSLASVL---ISCDYLHG 122
+ R + W A+I+GYAQ + E+ LF + + N +++S++ + C+ +
Sbjct: 278 VLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISR 337
Query: 123 KL-VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
K +H +K L+ + Y+ NALI+MYS+ + ++F++ME R+++SWN++I ++
Sbjct: 338 KEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVI 397
Query: 181 CKLEAQAIELFAKMKNEEEALFL---FRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
C + A+ L +M+ EE + ++ P+ T VL CA L
Sbjct: 398 CGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE 457
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+ + + +AL+ YA+CG ++L+++VFD+M ++++WN I+ AY +HG+
Sbjct: 458 IHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGK 517
Query: 298 AKEALQLFSNM--------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
KE+L+LF +M V+P TF++L ++CSH+G+V EG +FH M HG+ P
Sbjct: 518 GKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPA 577
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKL 408
DHYAC+VDL+GR G++ EA L+ MP D V WS LLG+CR + + E+AA L
Sbjct: 578 PDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENL 637
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
QL+P + +V +SNIY +G ++KA +R+ MK V+K PG SWIE + VH+F +G
Sbjct: 638 LQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAG 697
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HPQ E + LE L +LK GYVP+T+ LHDI+EE KE L HSEKLA+ F I+
Sbjct: 698 DLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGIL 757
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
N + IR+ KN+R+C DCH K S + +EI++RD+ RFHHFKD CSC DY
Sbjct: 758 NT----PPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDY 813
Query: 589 W 589
W
Sbjct: 814 W 814
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 189/410 (46%), Gaps = 48/410 (11%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
Q+H H+ + + N L+NMY K G L DA +FD + +R+ VSW ++IS +
Sbjct: 31 QIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCR 90
Query: 86 HGNAE---ECFRLFCSLLQYFFPNEFSLASVLISCDYLH-------GKLVHALALKFSLD 135
E + FRL L++ F P+ F+L S+ ++C L GK +H +
Sbjct: 91 FEEWEVAIKAFRLM--LMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFR---K 145
Query: 136 AH--VYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
H + NAL+ MY+K D+A + E R++++WNSMI++F
Sbjct: 146 GHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFS------------- 192
Query: 193 KMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
+NE EAL R + EG+ PD TF+ VL AC+ L R +H+ Y D
Sbjct: 193 --QNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHA----YALRTD 246
Query: 251 TVIAN-----ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
VI N AL+ Y CG + + VFD + + WN+++ YA ++AL LF
Sbjct: 247 DVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLF 306
Query: 306 SNMNVQPDSATFVSLLSACSHAGLVQEG---NKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M + + +S+ A + EG + H + G+ ++D+ R
Sbjct: 307 IEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSR 366
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
+G I ++++ M + D V W+ ++ S G + A L +++++E
Sbjct: 367 MGDIKTSKRIFDSME-DRDIVSWNTIITSYVICGRSSDALLLLHEMQRIE 415
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED--DTVIANALIHAYARCGSIS 268
G +PD F VLKA AG+ +H+ + K+G+ I N L++ Y +CG +
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
+ +VFD++T D VSWNSI+ A + + A++ F M +P S T VS+ ACS
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124
Query: 326 --------------HAGLVQEGN-KVF--HSMLENHGVVPQLDH---------------Y 353
H ++G+ + F ++++ + + +LD +
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTW 184
Query: 354 ACMVDLLGRVGRILEAEKLIREMPME---PDSVIWSVLLGSCRKHGETRLA-ELAATKLK 409
M+ + R +EA +R M +E PD V ++ +L +C R E+ A L+
Sbjct: 185 NSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALR 244
Query: 410 QLEP-GDSLGFVQMSNIYCLSGSFNKARLI 438
+ +S + ++YC G RL+
Sbjct: 245 TDDVIENSFVGSALVDMYCNCGQVESGRLV 274
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/548 (40%), Positives = 329/548 (60%), Gaps = 27/548 (4%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFS 109
MY K G + DARH+FD+MP R+VVSWT LI+GYAQ+ E L +L+ F PN F+
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 110 LASVLISCDYLHG----KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENME 164
S+L + G + +HALA+K++ D VYV +AL++MY++ D A VF+ +
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
+N +SWN++IA F A+ + E L F ++QR G T+S +
Sbjct: 121 SKNEVSWNALIAGF-------------ARKADGETTLMKFAEMQRNGFGATHFTYSSMFS 167
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
A A + VH+ + K G + + N ++ YA+ GS+ +++VFD+M DLV+
Sbjct: 168 AFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVT 227
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
WN++L A A +G KEA+ F + +Q + TF+S+L+ACSH GLV+EG F M+
Sbjct: 228 WNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYF-DMM 286
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+++ V P++DHY VDLLGR G + EA + +MPMEP + +W LLG+CR H ++
Sbjct: 287 KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMG 346
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
+ AA + +L+P D+ V + NIY +G +N A +RK MK + V+K P SW++IEN
Sbjct: 347 QYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENS 406
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
VH F + HP+ I++ EE+ ++K GYVP T+ L I E+ +E +L +HSEK+
Sbjct: 407 VHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKI 466
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
AL FA++N + + IRIMKNIRIC DCH+ K S + +EIVVRD+NRFHHF +
Sbjct: 467 ALAFALINMPA----GASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEG 522
Query: 582 ICSCNDYW 589
CSC DYW
Sbjct: 523 SCSCGDYW 530
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 56/325 (17%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +L A G Q+H + N +D++V + L++MYA+ +D A +FD
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKY--NWDEDVYVGSALLDMYARCEQMDMAIMVFDR 118
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HG 122
+ +N VSW ALI+G+A+ + E F + + F F+ +S+ + + G
Sbjct: 119 LVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 178
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ VHA +K +V N ++ MY+KS + +A KVF+ M+ R++++WN+M+ A
Sbjct: 179 RWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTA---- 234
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVH 239
A+ +EA+ F ++++ G+ + TF VL AC+ GLV E
Sbjct: 235 ---------LAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK----- 280
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
H + ++ ++ +++ DL+ +L K
Sbjct: 281 -------------------HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLL---------K 312
Query: 300 EALQLFSNMNVQPDSATFVSLLSAC 324
EAL M ++P +A + +LL AC
Sbjct: 313 EALIFVFKMPMEPTAAVWGALLGAC 337
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/611 (38%), Positives = 340/611 (55%), Gaps = 55/611 (9%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
L A +G +K+A +L E N +L N L+ Y K L DAR LFD MP
Sbjct: 176 LLAAYVHNGRLKEARRLFESQSN------WELISWNCLMGGYVKRNMLGDARQLFDRMPV 229
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG-------- 122
R+V+SW +ISGYAQ G+ + RLF NE + V + G
Sbjct: 230 RDVISWNTMISGYAQVGDLSQAKRLF---------NESPIRDVFTWTAMVSGYVQNGMVD 280
Query: 123 ---KLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAF- 178
K + +K + + +A + Y K A ++FE M RN+ SWN+MI +
Sbjct: 281 EARKYFDEMPVKNEISYNAMLAGYV--QYKKMVI--AGELFEAMPCRNISSWNTMITGYG 336
Query: 179 -----------------RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
R C A I +A+ + EEAL +F +++R+G + + TFS
Sbjct: 337 QNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSC 396
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
L CA + VH + K GFE + NAL+ Y +CGS + VF+ + D
Sbjct: 397 ALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKD 456
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+VSWN+++ YA HG ++AL LF +M V+PD T V +LSACSH+GL+ G + F+
Sbjct: 457 VVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFY 516
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
SM ++ V P HY CM+DLLGR GR+ EAE L+R MP +P + W LLG+ R HG T
Sbjct: 517 SMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNT 576
Query: 399 RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
L E AA + ++EP +S +V +SN+Y SG + +R +M+ + V+K G SW+E+
Sbjct: 577 ELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEV 636
Query: 459 ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHS 518
+N++H F+ G HP+++ I+ LEEL +++ GYV T L LHD+EEE KE L +HS
Sbjct: 637 QNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHS 696
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
EKLA+ F I+ ++ R IR+MKN+R+C DCHN +K S ++G+ I++RDS+RFHHF
Sbjct: 697 EKLAVAFGIL---TIPAGRP-IRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHF 752
Query: 579 KDRICSCNDYW 589
+ ICSC DYW
Sbjct: 753 SEGICSCGDYW 763
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 200/432 (46%), Gaps = 52/432 (12%)
Query: 9 ATLFHACALHGNIKQA-MQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ + + G ++ A L + + P +DLF N ++ Y + L +A LFD
Sbjct: 76 SSVSYNAMISGYLRNAKFSLARDLFDKMPE--RDLFSWNVMLTGYVRNRRLGEAHKLFDL 133
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVH 126
MPK++VVSW A++SGYAQ+G +E +F + P+ S++ + Y+H G+L
Sbjct: 134 MPKKDVVSWNAMLSGYAQNGFVDEAREVFNKM-----PHRNSISWNGLLAAYVHNGRLKE 188
Query: 127 ALALKFSLDAHVYVA-NALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A L S ++ N L+ Y K + +A ++F+ M R+VISWN+MI+ +
Sbjct: 189 ARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDL 248
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL--VTERHASAVHSLI 242
+QA LF NE +F M + +V +A + ++ + ++++
Sbjct: 249 SQAKRLF----NESPIRDVFTWT---AMVSGYVQNGMVDEARKYFDEMPVKNEISYNAML 301
Query: 243 AKYGFEDDTVIA---------------NALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
A Y VIA N +I Y + G I+ ++++FD M D VSW +
Sbjct: 302 AGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAA 361
Query: 288 ILKAYALHGQAKEALQLFSNMNVQPDS---ATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
I+ YA +G +EAL +F M +S +TF LS C+ ++ G +V H
Sbjct: 362 IISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQV-------H 414
Query: 345 G-VVPQLDHYACMVD--LLG---RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
G VV C V LLG + G EA + + E D V W+ ++ +HG
Sbjct: 415 GQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIE-EKDVVSWNTMIAGYARHGFG 473
Query: 399 RLAELAATKLKQ 410
R A + +K+
Sbjct: 474 RQALVLFESMKK 485
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 158/361 (43%), Gaps = 40/361 (11%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ N I+ + + G+ D A +F+ MP+R+ VS+ A+ISGY ++ F L L
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAK----FSLARDLF 100
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSL--DAHVYVANALINMYSKSC-ADEAW 157
+ +V+++ + +L A L F L V NA+++ Y+++ DEA
Sbjct: 101 DKMPERDLFSWNVMLTGYVRNRRLGEAHKL-FDLMPKKDVVSWNAMLSGYAQNGFVDEAR 159
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+VF M RN ISWN ++AA+ +A LF N E
Sbjct: 160 EVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWE------------------- 200
Query: 218 TFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
++ C G V L + D + N +I YA+ G +S +K++F+
Sbjct: 201 ---LISWNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMISGYAQVGDLSQAKRLFN 256
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNK 335
+ D+ +W +++ Y +G EA + F M V+ + ++ ++L AG VQ
Sbjct: 257 ESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK-NEISYNAML-----AGYVQYKKM 310
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
V L + + M+ G+ G I +A KL MP + D V W+ ++ ++
Sbjct: 311 VIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMP-QRDCVSWAAIISGYAQN 369
Query: 396 G 396
G
Sbjct: 370 G 370
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 129/269 (47%), Gaps = 30/269 (11%)
Query: 129 ALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
++KF D + N I+ + ++ D A +VF +M R+ +S+N+MI+ + + A
Sbjct: 38 SVKFK-DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLA 96
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+LF KM E LF +++++L G V R H L
Sbjct: 97 RDLFDKMP--ERDLF---------------SWNVML---TGYVRNRRLGEAHKLFDLMP- 135
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ D V NA++ YA+ G + +++VF+KM + + +SWN +L AY +G+ KEA +LF +
Sbjct: 136 KKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFES 195
Query: 308 MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
+ + ++ L+ ++ + ++F M V + + M+ +VG +
Sbjct: 196 QS-NWELISWNCLMGGYVKRNMLGDARQLFDRM-----PVRDVISWNTMISGYAQVGDLS 249
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+A++L E P+ D W+ ++ ++G
Sbjct: 250 QAKRLFNESPIR-DVFTWTAMVSGYVQNG 277
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 338/579 (58%), Gaps = 28/579 (4%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
NI Q Q+H + DL V N L+ M AK L A LF++M +R+ VSW+ +
Sbjct: 15 NIFQIKQVHAQVTTT--GIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVM 72
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSL 134
I G+ ++G+ E CF+ F L++ P+ FSL V+ +C + G+L+H+ LK L
Sbjct: 73 IGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGL 132
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+V + L++MY+K D A ++F+ M +++++ MIA + C
Sbjct: 133 HLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECG----------- 181
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
E+ LF Q++R+G PD ++ ACA L A VH + + D +
Sbjct: 182 --KPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVEL 239
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNV 310
A+I YA+CGSI S+++FD+M +++SW++++ AY HGQ +EAL+LF N +
Sbjct: 240 GTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGI 299
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
P+ TF+SLL ACSHAGLV +G ++F M ++GV P + HY CMVDLLGR GR+ +A
Sbjct: 300 IPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQAL 359
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+LI M +E D IW LG+CR H + LAE AA L L+ + ++ +SNIY +G
Sbjct: 360 RLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAG 419
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ IR M R++K PG +WIE++N ++ F +G H + I++ L+ L +L+
Sbjct: 420 RWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLE 479
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GYVP+T+ LHD++EE K L+ HSEKLA+ F ++ + + IRI KN+R+C
Sbjct: 480 SAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATP----DGTPIRITKNLRVCG 535
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH+F KL S + ++I+VRD+NRFHHFK+ ICSC DYW
Sbjct: 536 DCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 17/217 (7%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ T+ +ACA G + +A +H+++ D+ + +I+MYAK G +D
Sbjct: 198 FVPDKVAMVTIVNACAKLGAMNKARLVHDYVCAR--RYSLDVELGTAMIDMYAKCGSIDS 255
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY 119
+R +FD M ++NV+SW+A+I Y HG E LF +L PN + S+L +C
Sbjct: 256 SREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACS- 314
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYS--------KSCADEAWKVFENMEF-RNVIS 170
H LV FSL + Y + Y+ D+A ++ ENME ++
Sbjct: 315 -HAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGI 373
Query: 171 WNSMIAA---FRACKLEAQAIELFAKMKNEEEALFLF 204
W + + A R L +A +L ++ + ++
Sbjct: 374 WCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYIL 410
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 342/563 (60%), Gaps = 32/563 (5%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
E ++FV + L++MY KFG +A+ + D + +++VV TALI GY+Q G E + F
Sbjct: 179 EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 238
Query: 98 SLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-S 151
S+L + PNE++ ASVLISC D +GKL+H L +K ++ + +L+ MY + S
Sbjct: 239 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 298
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D++ VF+ +++ N ++W S+I+ + EE AL FR++ R+
Sbjct: 299 LVDDSLLVFKCIKYPNQVTWTSLISGL-------------VQNGREETALIEFRKMMRDS 345
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P+ T S L+ C+ L VH +++KYGF+ D + LI Y +CG +++
Sbjct: 346 VKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMAR 405
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAG 328
VFD ++ D++S N+++ +YA +G +EAL+LF N+ +QP+ T +S+L AC+++G
Sbjct: 406 LVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSG 465
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV+EG ++F S ++ ++ DHYACMVD+LGR GR+ EAE LI E+ PD V+W L
Sbjct: 466 LVEEGCELFDSFRKDKIMLTN-DHYACMVDMLGRAGRLEEAEMLITEVT-NPDLVLWRTL 523
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +C+ H + +AE K+ ++ PGD + +SN+Y +G + + ++ +MK +++
Sbjct: 524 LSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLK 583
Query: 449 KYPGLSWIEIENRVHEFASGGK-RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
K P +SW+EI+ H F +G HP E I + LEELI + K +GYV + S D+EE
Sbjct: 584 KNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDMEE 643
Query: 508 EHKEEQLYHHSEKLALVFAI-MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
KE L+ HSEKLA+ FA+ N G IRI+KN+R+CVDCH+++K+ S ++ +E
Sbjct: 644 TAKERSLHQHSEKLAIAFAVWRNVG------GSIRILKNLRVCVDCHSWIKIVSRIIKRE 697
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+ RDS RFHHF+D CSC DYW
Sbjct: 698 IICRDSKRFHHFRDGSCSCGDYW 720
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 203/413 (49%), Gaps = 34/413 (8%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L +T ++ L C +I + M+ + FP E + L++ K G +
Sbjct: 44 LTTTHTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVE----LSGSKLVDASLKCGEIGY 99
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDY 119
AR LFD MP+R++V+W ++I+ Y +H ++E ++ ++ P+E++L+SV +
Sbjct: 100 ARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSD 159
Query: 120 L----HGKLVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
L + H LA+ L+ ++V+V +AL++MY K EA V + +E ++V+ +
Sbjct: 160 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 219
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I +++ + EA+ F+ + E + P+ T++ VL +C L
Sbjct: 220 LIVG-------------YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIG 266
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+ +H L+ K GFE +L+ Y RC + S VF + Y + V+W S++
Sbjct: 267 NGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLV 326
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G+ + AL F M +V+P+S T S L CS+ + +EG +V H ++ +G
Sbjct: 327 QNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQV-HGIVSKYGF--DR 383
Query: 351 DHYA--CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D YA +++L G+ G + +L+ + E D + + ++ S ++G R A
Sbjct: 384 DKYAGSGLIELYGKCG-CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 435
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/628 (35%), Positives = 360/628 (57%), Gaps = 66/628 (10%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFGYL---- 58
++ ++ +CAL ++ LH ++I +F DL+ N L+NMY+K +L
Sbjct: 107 NVFPSVLKSCALLMDLNLGESLHGYIIRVGLDF-----DLYTGNALMNMYSKLRFLEESG 161
Query: 59 ----------------------------DDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
D R +F+ MP++++VSW +I+G A++G E
Sbjct: 162 RQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE 221
Query: 91 ECFRLFCSLL-QYFFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANALI 145
E R+ + P+ F+L+SVL + D GK +H +++ LDA +YVA++LI
Sbjct: 222 ETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLI 281
Query: 146 NMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
+MY+K + ++ +VF + R+ ISWNS+IA C LF +E L F
Sbjct: 282 DMYAKCTRVADSCRVFTLLTERDGISWNSIIAG---CVQNG----LF------DEGLRFF 328
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
RQ+ + P +FS ++ ACA L T +H I + GF+++ IA++L+ YA+C
Sbjct: 329 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 388
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
G+I +KQ+FD+M D+VSW +++ ALHGQA +A++LF M ++P+ F+++L
Sbjct: 389 GNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVL 448
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
+ACSH GLV E K F+SM + G+ P ++HYA + DLLGR GR+ EA I M + P
Sbjct: 449 TACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPT 508
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
IW+ LL +CR H +AE A ++ +++P ++ ++ ++NIY + + +A R
Sbjct: 509 GSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRAS 568
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
M+ +RK P SWIE++N+V+ F +G + HP E I + +E L+ ++ GYVP+TS
Sbjct: 569 MRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEV 628
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
HD+EEE K+ + HSE+LA+VF I+N + IR+ KN+R+C DCH K S
Sbjct: 629 HHDVEEEQKKYLVCSHSERLAIVFGIINTPA----GMTIRVTKNLRVCTDCHTATKFISK 684
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++G+EIVVRD++RFHHFK+ CSC DYW
Sbjct: 685 IVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 170/388 (43%), Gaps = 56/388 (14%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFS 109
+Y+ L D+ LF+ + ++W ++I Y HG + F +L +P+
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 110 LASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK--------------- 150
SVL SC L G+ +H ++ LD +Y NAL+NMYSK
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 151 ------------------SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
D K+FE M ++++SWN++IA A
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAG-------------NA 215
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ EE L + R++ + PD T S VL A V +H + G + D
Sbjct: 216 RNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIY 275
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+A++LI YA+C ++ S +VF +T D +SWNSI+ +G E L+ F M
Sbjct: 276 VASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK 335
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
++P S +F S++ AC+H + G K H + +G + + +VD+ + G I A
Sbjct: 336 IKPKSYSFSSIMPACAHLTTLHLG-KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTA 394
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+++ M + D V W+ ++ C HG+
Sbjct: 395 KQIFDRMRLR-DMVSWTAMIMGCALHGQ 421
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/594 (38%), Positives = 337/594 (56%), Gaps = 32/594 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +++ ACA G Q+H MI N D ++ L++MYAK +LDDA +FD
Sbjct: 212 MLSSILKACAGAGAFDLGRQIHGFMIK--ANADSDDYIGVGLVDMYAKNHFLDDAMKVFD 269
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG--- 122
M R+++ W ALISG + G +E F +F L + N +LA+VL S L
Sbjct: 270 WMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASA 329
Query: 123 -KLVHALALK--FSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ VHALA K F DAHV N LI+ Y K SC +A +VFE ++I+ SMI A
Sbjct: 330 TRQVHALAEKIGFIFDAHV--VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 387
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C + E A+ LF ++ R+G+ PD S +L ACA L V
Sbjct: 388 SQCD-------------HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 434
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + K F D NAL++ YA+CGSI ++ F + +VSW++++ A HG
Sbjct: 435 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 494
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
K AL+LF M + P+ T S+L AC+HAGLV E + F+SM E G+ +HY+C
Sbjct: 495 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 554
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
M+DLLGR G++ +A +L+ MP + ++ +W LLG+ R H + L +LAA KL LEP
Sbjct: 555 MIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 614
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S V ++N Y SG +N+ +RK MK S ++K P +SW+E++++VH F G K HP
Sbjct: 615 SGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMT 674
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+ KL+EL + GY+P + LHD++ KE L HHSE+LA+ FA+++
Sbjct: 675 KEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLST----P 730
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+RIC DCH K S+++ +EI++RD NRFHHF+D CSC DYW
Sbjct: 731 PGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 224/449 (49%), Gaps = 33/449 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ + +AC NI Q+H ++ +D+F N L++MY K G +D A +F++
Sbjct: 112 FSCVVNACTGSRNIDAGRQVHAMVVR--MGYEKDVFTANALVDMYVKMGRVDIASVIFEK 169
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
MP +VVSW ALISG +G+ L + PN F L+S+L +C + G
Sbjct: 170 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 229
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K + D+ Y+ L++MY+K+ D+A KVF+ M R++I WN++I+ C
Sbjct: 230 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS---GC 286
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ +EA +F L++EG+ + T + VLK+ A L VH+L
Sbjct: 287 SHGGR----------HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHAL 336
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K GF D + N LI +Y +C +S + +VF++ + D+++ S++ A + + A
Sbjct: 337 AEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGA 396
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M ++PD SLL+AC+ ++G +V +++ + A +V
Sbjct: 397 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA-LVY 455
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSL 417
+ G I +AE +P E V WS ++G +HG + A EL + ++ G +
Sbjct: 456 TYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFG---RMVDEGINP 511
Query: 418 GFVQMSNIYCL---SGSFNKARLIRKEMK 443
+ M+++ C +G ++A+ MK
Sbjct: 512 NHITMTSVLCACNHAGLVDEAKRYFNSMK 540
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 27/386 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N L+ MY FG++DDAR +FDE +RN VSW L+S Y ++ + ++F
Sbjct: 40 SDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 99
Query: 99 LL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
++ P EF + V+ +C + G+ VHA+ ++ + V+ ANAL++MY K
Sbjct: 100 MVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGR 159
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A +FE M +V+SWN++I+ C L + A+ L Q++ G+
Sbjct: 160 VDIASVIFEKMPDSDVVSWNALISG---CVLNGH----------DHRAIELLLQMKSSGL 206
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ S +LKACAG +H + K + D I L+ YA+ + + +
Sbjct: 207 VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 266
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD M++ DL+ WN+++ + G+ EA +F + + + T ++L + +
Sbjct: 267 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 326
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL- 388
+V H++ E G + ++D + + +A ++ E + S++
Sbjct: 327 ASATRQV-HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 385
Query: 389 -LGSCRKHGETRLAELAATKLKQLEP 413
L C HGE + K LEP
Sbjct: 386 ALSQC-DHGEGAIKLFMEMLRKGLEP 410
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 151/302 (50%), Gaps = 31/302 (10%)
Query: 106 NEFSLASVLISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF-E 161
NEF+L V++ C D G VHA+A+ + V+VANAL+ MY D+A +VF E
Sbjct: 9 NEFAL-PVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDE 67
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTF 219
RN +SWN +++A+ +KN++ +A+ +F ++ G+ P F
Sbjct: 68 AGSERNAVSWNGLMSAY---------------VKNDQCGDAIQVFGEMVWSGIQPTEFGF 112
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
S V+ AC G VH+++ + G+E D ANAL+ Y + G + ++ +F+KM
Sbjct: 113 SCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPD 172
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D+VSWN+++ L+G A++L M + P+ S+L AC+ AG G ++
Sbjct: 173 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 232
Query: 337 FHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
M++ + D Y +VD+ + + +A K+ M D ++W+ L+ C
Sbjct: 233 HGFMIKANA---DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALISGCSH 288
Query: 395 HG 396
G
Sbjct: 289 GG 290
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/559 (39%), Positives = 328/559 (58%), Gaps = 27/559 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDA-RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV N LI MY K G +++A + +FD M + V SW AL+ GYAQ+ + + L+ +
Sbjct: 242 DVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQM 301
Query: 100 LQYFF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
P+ F++ S+L++C + +G+ +H AL+ L ++ +L+++Y
Sbjct: 302 TDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKP 361
Query: 155 EAWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A +V F+ ME R+++SWN MIA + L +EA+ LFRQ+ +G+
Sbjct: 362 FAAQVLFDGMEHRSLVSWNVMIAGYSQNGLP-------------DEAINLFRQMLSDGIQ 408
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P V AC+ L R +H K +D +++++I YA+ G I LS+++
Sbjct: 409 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 468
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD++ D+ SWN I+ Y +HG+ KEAL+LF M ++PD TF +L ACSHAGLV
Sbjct: 469 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLV 528
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++G + F+ ML H + P+L+HY C+VD+LGR GRI +A +LI EMP +PDS IWS LL
Sbjct: 529 EDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
SCR HG L E A KL +LEP +V +SN++ SG ++ R +R MK ++K
Sbjct: 589 SCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKD 648
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G SWIE+ +VH F G + P+ E + + L ++ +GY P+T LHD+EEE K
Sbjct: 649 AGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDK 708
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
L HSEKLA+ F ++N + +R+ KN+RIC DCHN K S ++ ++IVVR
Sbjct: 709 IGILRGHSEKLAISFGLLNTA----KGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVR 764
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+ RFHHF+D ICSC DYW
Sbjct: 765 DNKRFHHFRDGICSCGDYW 783
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 207/424 (48%), Gaps = 29/424 (6%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
++ L AC +I+ +LHE M++ D + +I MY+ G D+R +
Sbjct: 105 SEAMGVLLQACGQRKDIEVGRRLHE-MVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMV 163
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF--FPNEFSLASVLISC----D 118
FD++ ++N+ W A++S Y ++ E+ +F L+ P+ F+L V+ +C D
Sbjct: 164 FDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLD 223
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWK-VFENMEFRNVISWNSMIA 176
G+++H +A K L + V+V NALI MY K +EA K VF+ M+ + V SWN+++
Sbjct: 224 LGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLC 283
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+A+ + +AL L+ Q+ G+ PDW T +L AC+ + + +
Sbjct: 284 G-------------YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGE 330
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H + G D I +L+ Y CG ++ +FD M + LVSWN ++ Y+ +G
Sbjct: 331 EIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNG 390
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
EA+ LF M +QP + + ACS ++ G ++ L+ H + +
Sbjct: 391 LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH-LTEDIFVS 449
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLK-QL 411
+ ++D+ + G I ++++ + E D W+V++ HG + A EL L+ L
Sbjct: 450 SSIIDMYAKGGCIGLSQRIFDRL-REKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGL 508
Query: 412 EPGD 415
+P D
Sbjct: 509 KPDD 512
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+FV++ +I+MYAK G + ++ +FD + +++V SW +I+GY HG +E LF +
Sbjct: 444 EDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM 503
Query: 100 LQYFF-PNEFSLASVLISCDY 119
L+ P++F+ +L++C +
Sbjct: 504 LRLGLKPDDFTFTGILMACSH 524
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/585 (38%), Positives = 335/585 (57%), Gaps = 49/585 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ N++ +Q+H+ ++ +LF+ N L+ MY K G L +AR + D+
Sbjct: 140 FPCVLKACSGLDNLRVGLQVHDAIVK--VGLDTNLFIGNALVAMYGKCGCLREARKVLDQ 197
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
MP R+VVSW ++++GYAQ G ++ + C + S+ ++ D +
Sbjct: 198 MPYRDVVSWNSMVAGYAQSGQFDDALEI-CK----------EMDSLNLNHDAGTMASLSP 246
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
+ SL+ Y+ N +FE M +N+ISWN MI A
Sbjct: 247 VVCYTSLENVQYIHN----------------MFERMTKKNLISWNVMI-----------A 279
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I + M NE +LFL Q++ GM PD T + +L AC L +H I K
Sbjct: 280 IYVNNSMPNEAVSLFL--QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNL 337
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ ++ NAL+ YA+CG + ++ VFDKM D+VSW S++ AY GQ +A+ LF+
Sbjct: 338 RPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAK 397
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M PDS FVS+LSACSH GL+ +G F M E +G+VP+++H+ACMVDL GR G
Sbjct: 398 MLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAG 457
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
+ EA I++MPMEP+ +W LL +CR H + + +AA L QL P S +V +SN
Sbjct: 458 EVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSN 517
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
IY +G + +R MK ++K PG+S +E+ +VH F +G + HPQ + I+ +L+
Sbjct: 518 IYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDV 577
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
L+G++K +GY+P+T ALHD+E E KE L HSEKLA+VFAI+N ++ + IRI K
Sbjct: 578 LVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNT----KQGTPIRITK 633
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N+R+C DCH +KL S ++ + I+VRD NRFHHF + ICSC DYW
Sbjct: 634 NLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 29/295 (9%)
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F+ +NV+ +N MI ++ L EAL +F+ + PD T
Sbjct: 93 IFDRSLEKNVVFFNVMIRSYVNNNLYV-------------EALSIFQVMLSCAFNPDHYT 139
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F VLKAC+GL R VH I K G + + I NAL+ Y +CG + +++V D+M
Sbjct: 140 FPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP 199
Query: 279 YHDLVSWNSILKAYALHGQAKEALQL---FSNMNVQPDSATFVSLLSACSHAGLVQEGNK 335
Y D+VSWNS++ YA GQ +AL++ ++N+ D+ T SL + L E +
Sbjct: 200 YRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQ 257
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP---MEPDSVIWSVLLGSC 392
H+M E L + M+ + EA L +M M+PD+V + LL +C
Sbjct: 258 YIHNMFERM-TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPAC 316
Query: 393 RKHGETRLAELAATKLKQLEPGDSLGFVQMSN----IYCLSGSFNKARLIRKEMK 443
G+ L K +E G+ + + N +Y G +AR + +M+
Sbjct: 317 ---GDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMR 368
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/599 (37%), Positives = 341/599 (56%), Gaps = 30/599 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ Q + L ++CA ++ + +H ++++ QD F+ LINMY + G +D A
Sbjct: 77 TQQTFEHLIYSCAQKNSLSYGLDVHRCLVDS--GFDQDPFLATKLINMYYELGSIDRALK 134
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL---------LQYFFPNEFSLASVL 114
+FDE +R + W AL A G+ +E L+ + Y + + + S L
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSEL 194
Query: 115 ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
C GK +HA L+ +A+++V L+++Y+K A VF M +N +SW++
Sbjct: 195 SVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSA 254
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MIA F ++ +A+ELF L +F P+ T +L+ACAGL
Sbjct: 255 MIACFAKNEMPMKALELFQ--------LMMFEACNS---VPNSVTMVNMLQACAGLAALE 303
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H I + + + NALI Y RCG + + ++VFD M D+VSWNS++ Y
Sbjct: 304 QGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYG 363
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+HG K+A+Q+F NM V P +F+++L ACSHAGLV+EG +F SML + + P +
Sbjct: 364 MHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGM 423
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HYACMVDLLGR R+ EA KLI +M EP +W LLGSCR H LAE A+T L +
Sbjct: 424 EHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFE 483
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP ++ +V +++IY + +++A+ + K ++ ++K PG SWIE++ +V+ F S +
Sbjct: 484 LEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDE 543
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+PQ E I L +L ++K GYVP+T++ L+D++EE KE + HSEKLA+ F ++N
Sbjct: 544 HNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINT 603
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH K S +EI+VRD NRFHHF+D +CSC DYW
Sbjct: 604 A----KGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P TF ++ +CA + + VH + GF+ D +A LI+ Y GSI + +V
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGL- 329
FD+ + WN++ +A A+ G KE L L+ MN D T+ +L AC + L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 330 ---VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+++G ++ H+ + HG + ++D+ + G + A + MP + + V WS
Sbjct: 196 VCPLRKGKEI-HAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSWS 253
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
++ +C E + L +L E +S+
Sbjct: 254 AMI-ACFAKNEMPMKALELFQLMMFEACNSV 283
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/613 (37%), Positives = 354/613 (57%), Gaps = 36/613 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA L C I A +LH H+++ + Q F+ N LI MY K G L AR LF+
Sbjct: 63 YAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFES 122
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYL------ 120
MP RNV +WT ++ ++ +G E F + Q P+ + + +L + +
Sbjct: 123 MPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAID 182
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H A L +V V A+I+MY K C D+A FE ++++N ++WN+M+ +
Sbjct: 183 QGREIHRYARISGLLPNVVVGTAVISMYGK-CGRLDDARAAFEELQWKNSVTWNAMMTNY 241
Query: 179 RACKLEAQAIELFAKMKNEE------------------EALFLFRQL-QREGMAPDWCTF 219
+ + +A+ELF +M + + +AL L+R + +AP TF
Sbjct: 242 KLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTF 301
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
V+ CA L + A+H+ + F+ + +++NAL+H Y +CG + + VF M
Sbjct: 302 VTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKL 361
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKV 336
D +SWN+I+ +YA HG + +AL L+ M++Q P TFV LLSACSH GLV +G
Sbjct: 362 KDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDY 421
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F+ M ++H + P + H+ C++DLLGR GR+ EAE +++ MP++ ++V W LLG+C+ HG
Sbjct: 422 FYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 481
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ + AA ++ P S G+V +SNIY +G + IRK M V+K PG SWI
Sbjct: 482 DLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWI 541
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
EI + VHEF SG HPQ E I+ +L +++ ++KG+GYVP+TS HD+EEE KE+ L
Sbjct: 542 EIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVC 601
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+V+ M + +S++RI+KN+R+C+DCH K S + G++IVVRD+ RFH
Sbjct: 602 HSEKLAIVYGNM----VVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFH 657
Query: 577 HFKDRICSCNDYW 589
F++ CSC DYW
Sbjct: 658 LFENGSCSCRDYW 670
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/553 (39%), Positives = 328/553 (59%), Gaps = 26/553 (4%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF- 104
N L+N+Y + DDAR +FD++ N++SW ++I Y Q ++ +LF ++ Q
Sbjct: 401 NALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQ 460
Query: 105 PNEFSLASVLISCDY-LHG---KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKV 159
P+ + ++L +C HG KLVH + L V +L+NMY+K+ D A +
Sbjct: 461 PDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVI 520
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
+ M+ + + +WN +I + A EAL +++LQ E + D TF
Sbjct: 521 LQEMDEQQITAWNVLINGY-------------ALHGRSREALEAYQKLQLEAIPVDKVTF 567
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
VL AC + +HS + G + D ++ NAL + Y++CGS+ ++++FD M
Sbjct: 568 ISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI 627
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
VSWN +L+AYA HG+++E L+L M V+ + TFVS+LS+CSHAGL+ EG +
Sbjct: 628 RSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQY 687
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
FHS+ + G+ + +HY C+VDLLGR G++ EAEK I +MP+EP V W+ LLG+CR
Sbjct: 688 FHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQK 747
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ +LAA KL +L+PG+S V +SNIY G + A +R+ M RV+K PG+S I
Sbjct: 748 DLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSI 807
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
+++N+VHEF HP+ I+ K+EEL ++ GYVP+T + LHD++EE KE L +
Sbjct: 808 QVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAY 867
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+ F +++ E S + I KN+R+C DCH K S + G+EIVVRD++RFH
Sbjct: 868 HSEKLAIAFGLIST----PETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFH 923
Query: 577 HFKDRICSCNDYW 589
HF+D CSC DYW
Sbjct: 924 HFRDGSCSCKDYW 936
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 221/460 (48%), Gaps = 67/460 (14%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q+ V L+NMY K G L DA+ +F+EM ++NVV+W A++ Y+ G C++L L
Sbjct: 91 QNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGC---CWKLAVEL 147
Query: 100 -----LQYFFPNEFSLASVL---ISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSK 150
L+ N + +VL + D L GK +H+ + V+V AL+N Y+K
Sbjct: 148 FTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTK 207
Query: 151 SCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+ +A KVF+ M R+V +WNSMI+A+ + EA F+F+++Q+
Sbjct: 208 CGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSG-------------EAFFIFQRMQQ 254
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
EG D TF +L AC T +H V I++ FE D + ALI YARC S
Sbjct: 255 EGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPED 314
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ QVF +M +L++W++I+ A+A HG EAL+ F M + P+ TF+SLL+ +
Sbjct: 315 AAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTT 374
Query: 327 AGLVQEGNKVFHSMLENHGV-------------------------------VPQLDHYAC 355
++E +++ H ++ HG+ +P L +
Sbjct: 375 PSGLEELSRI-HLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNS 433
Query: 356 MVDLLGRVGRILEAEKLIREMP---MEPDSVIWSVLLGSCR--KHGETRLAELAATKLKQ 410
M+ + + R +A +L R M ++PD V + +LG+C HG TR +
Sbjct: 434 MIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESG 493
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
L G L + N+Y +G + A +I +EM ++ +
Sbjct: 494 L-GGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAW 532
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 182/362 (50%), Gaps = 37/362 (10%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFS 109
MY++ G L DA F ++ RNVVSW +IS Y+ + + +E LF LL+ PN +
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 110 LASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENM 163
L +VL SC G LVHAL+L+ + VA AL+NMY K C +A VFE M
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGK-CGTLLDAQSVFEEM 119
Query: 164 EFRNVISWNSMIAAF--RAC--KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
+NV++WN+M+ + + C KL A+ELF +M EG+ + TF
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKL---AVELFTRM-------------LLEGVKANVITF 163
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
VL + R +HS + + D + AL++ Y +CGS++ +++VFD M
Sbjct: 164 LNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPC 223
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKV 336
+ +WNS++ AY++ ++ EA +F M + D TF+S+L AC + +Q G V
Sbjct: 224 RSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHV 283
Query: 337 FHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
S+ E +LD + ++ + R +A ++ M + + + WS ++ +
Sbjct: 284 RESISETS---FELDLFVGTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFAD 339
Query: 395 HG 396
HG
Sbjct: 340 HG 341
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 33/297 (11%)
Query: 8 YATLFHACAL--HGNIKQAMQ--LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ T+ AC + HG ++ + + E + P V L+NMYAK G LD A
Sbjct: 466 FMTILGACTIGSHGRTRKLVHQCVEESGLGGSP------LVQTSLVNMYAKAGELDVAEV 519
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----D 118
+ EM ++ + +W LI+GYA HG + E + L P ++ + SVL +C
Sbjct: 520 ILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTS 579
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAA 177
GK++H+ A++ LD+ V V NAL NMYSK + E A ++F++M R+ +SWN M+ A
Sbjct: 580 LAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQA 639
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHA 235
+A+ EE L L R++++EG+ + TF VL +C AGL+ E
Sbjct: 640 -------------YAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAE-GC 685
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKA 291
HSL G E T L+ R G + +++ KM +V+W S+L A
Sbjct: 686 QYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGA 742
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ +AC ++ + +H + + + D+ V N L NMY+K G +++AR +FD
Sbjct: 567 FISVLNACTSSTSLAEGKMIHSNAVECGLD--SDVIVKNALTNMYSKCGSMENARRIFDS 624
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHGKLV- 125
MP R+ VSW ++ YAQHG +EE +L + Q N + SVL SC H L+
Sbjct: 625 MPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCS--HAGLIA 682
Query: 126 ------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAA 177
H+L ++ L+++ ++ EA K M +++W S++ A
Sbjct: 683 EGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGA 742
Query: 178 FRACK 182
R K
Sbjct: 743 CRVQK 747
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 347/588 (59%), Gaps = 28/588 (4%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
L CA +++ ++H M + + P+ F++N L++MY K G L +A+ +FD M
Sbjct: 47 LIRRCAGAKALEEGRRIHRWMDSGTLDRPR--FLSNLLVDMYGKCGSLVEAKRVFDAMQH 104
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYL----HGKLV 125
+NV SWT L++G+ Q G E +LF + Q P+ +L + SC G+ +
Sbjct: 105 KNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREI 164
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H+ A +D+ + ANA+INMY K + EA+ VF M +NVISW++MIAAF C+ E
Sbjct: 165 HSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAF--CQNE 222
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+EAL F+ +Q+EGM D T+ VL A + A+H I
Sbjct: 223 LA-----------DEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVY 271
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
G + V+ N L++ Y +CGS ++ VFD M ++VSWN++L AY +G+++EAL L
Sbjct: 272 AGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALAL 331
Query: 305 FSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F +M+ V+P+ TFV++L CSH+G ++ F M ++ G+ P+ H+ C++D+LG
Sbjct: 332 FDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLG 391
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G++ EAE+LI+ MP+ D+V+W+ LL +C H + A AA + Q EP + ++
Sbjct: 392 RSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIM 451
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SN+Y +++A +RK M+ + VRK G SWIEI+ +VHEF +G HP + IFK
Sbjct: 452 LSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKT 511
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L+ L+ +++ GY P+ + +H +EEE K+E L++HSEKLA+ F I + R+ +
Sbjct: 512 LQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPP----RTPLC 567
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I+KN+R+C DCH+ +K S + G+ I VRDSNRFHHF CSC DYW
Sbjct: 568 IVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
L++ G A +++ CAG +H + + ++N L+ Y +CGS
Sbjct: 32 LEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGS 91
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSA 323
+ +K+VFD M + ++ SW ++ + G+ EA+QLF M + PD + + +
Sbjct: 92 LVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDS 151
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C A + +G ++ HS + G+ L ++++ G+ G I EA + MP E + +
Sbjct: 152 CGAAKALSQGREI-HSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMP-EKNVI 209
Query: 384 IWSVLLGS 391
WS ++ +
Sbjct: 210 SWSTMIAA 217
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/594 (38%), Positives = 337/594 (56%), Gaps = 32/594 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +++ ACA G Q+H MI N D ++ L++MYAK +LDDA +FD
Sbjct: 305 MLSSILKACAGAGAFDLGRQIHGFMIK--ANADSDDYIGVGLVDMYAKNHFLDDAMKVFD 362
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG--- 122
M R+++ W ALISG + G +E F +F L + N +LA+VL S L
Sbjct: 363 WMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASA 422
Query: 123 -KLVHALALK--FSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ VHALA K F DAHV N LI+ Y K SC +A +VFE ++I+ SMI A
Sbjct: 423 TRQVHALAEKIGFIFDAHV--VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 480
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C + E A+ LF ++ R+G+ PD S +L ACA L V
Sbjct: 481 SQCD-------------HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + K F D NAL++ YA+CGSI ++ F + +VSW++++ A HG
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
K AL+LF M + P+ T S+L AC+HAGLV E + F+SM E G+ +HY+C
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
M+DLLGR G++ +A +L+ MP + ++ +W LLG+ R H + L +LAA KL LEP
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 707
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S V ++N Y SG +N+ +RK MK S ++K P +SW+E++++VH F G K HP
Sbjct: 708 SGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMT 767
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+ KL+EL + GY+P + LHD++ KE L HHSE+LA+ FA+++
Sbjct: 768 KEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLST----P 823
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+RIC DCH K S+++ +EI++RD NRFHHF+D CSC DYW
Sbjct: 824 PGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 224/449 (49%), Gaps = 33/449 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ + +AC NI Q+H ++ +D+F N L++MY K G +D A +F++
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVRM--GYEKDVFTANALVDMYVKMGRVDIASVIFEK 262
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
MP +VVSW ALISG +G+ L + PN F L+S+L +C + G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 322
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K + D+ Y+ L++MY+K+ D+A KVF+ M R++I WN++I+ C
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS---GC 379
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ +EA +F L++EG+ + T + VLK+ A L VH+L
Sbjct: 380 SHGGR----------HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHAL 429
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K GF D + N LI +Y +C +S + +VF++ + D+++ S++ A + + A
Sbjct: 430 AEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGA 489
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M ++PD SLL+AC+ ++G +V +++ + A +V
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA-LVY 548
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSL 417
+ G I +AE +P E V WS ++G +HG + A EL + ++ G +
Sbjct: 549 TYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFG---RMVDEGINP 604
Query: 418 GFVQMSNIYCL---SGSFNKARLIRKEMK 443
+ M+++ C +G ++A+ MK
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMK 633
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 183/363 (50%), Gaps = 32/363 (8%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFF 104
NHLI+ Y+K AR +FDE+P VSW++L++ Y+ +G + F + +
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 105 PNEFSLASVLISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF- 160
NEF+L V++ C D G VHA+A+ + V+VANAL+ MY D+A +VF
Sbjct: 101 CNEFAL-PVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFD 159
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCT 218
E RN +SWN +++A+ +KN++ +A+ +F ++ G+ P
Sbjct: 160 EAGSERNAVSWNGLMSAY---------------VKNDQCGDAIQVFGEMVWSGIQPTEFG 204
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS V+ AC G VH+++ + G+E D ANAL+ Y + G + ++ +F+KM
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 264
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSWN+++ L+G A++L M + P+ S+L AC+ AG G +
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 324
Query: 336 VFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ M++ + D Y +VD+ + + +A K+ M D ++W+ L+ C
Sbjct: 325 IHGFMIKANA---DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGCS 380
Query: 394 KHG 396
G
Sbjct: 381 HGG 383
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 27/386 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N L+ MY FG++DDAR +FDE +RN VSW L+S Y ++ + ++F
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 99 LL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
++ P EF + V+ +C + G+ VHA+ ++ + V+ ANAL++MY K
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGR 252
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A +FE M +V+SWN++I+ C L + A+ L Q++ G+
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISG---CVLNGH----------DHRAIELLLQMKSSGL 299
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ S +LKACAG +H + K + D I L+ YA+ + + +
Sbjct: 300 VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 359
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD M++ DL+ WN+++ + G+ EA +F + + + T ++L + +
Sbjct: 360 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 419
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL- 388
+V H++ E G + ++D + + +A ++ E + S++
Sbjct: 420 ASATRQV-HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 478
Query: 389 -LGSCRKHGETRLAELAATKLKQLEP 413
L C HGE + K LEP
Sbjct: 479 ALSQC-DHGEGAIKLFMEMLRKGLEP 503
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+ + K GF + N LI Y++C +++VFD++ VSW+S++ AY+ +G
Sbjct: 26 LHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83
Query: 298 AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
+ A+Q F M + +L Q G +V H+M G + +V
Sbjct: 84 PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQV-HAMAMATGFGSDVFVANALV 142
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ G G + +A ++ E E ++V W+ L+ + K+ +
Sbjct: 143 AMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQ 182
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 329/616 (53%), Gaps = 70/616 (11%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D FV + L++ Y + G AR +FD MP++NVV W+ALI+GY+ G+AE + L +
Sbjct: 50 EDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQM 109
Query: 100 L------------------------------------QYFFPNEFSLASVLISCDYLH-- 121
+ FFP+ ++ L + +
Sbjct: 110 RSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEV 169
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH +K V ALI+MY K ADE +VF +V S N+++A
Sbjct: 170 SVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGL 229
Query: 179 RACKLEAQAIELF----------------------AKMKNEEEALFLFRQLQREGMAPDW 216
++A+ LF + + EA+ LFR +Q G+ P+
Sbjct: 230 SRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNS 289
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T VL A A + H + H + GF D + +AL+ YA+CG ++ +FD
Sbjct: 290 VTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDA 349
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEG 333
M ++VSWN+++ YA+HG A A+QLF +M +PD TF +L ACS AGL +EG
Sbjct: 350 MPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEG 409
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ F+ M + HG+ P+++HYACMV LLGR G++ EA LI EMP EPDS IW LLGSCR
Sbjct: 410 RRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCR 469
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
+G LAE+AA KL QLEPG++ +V +SNIY ++ +R EMK ++K G
Sbjct: 470 VYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGC 529
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWIEI+N+VH +G HP AI +KL +L ++ +G+ P LHD+EE+ K+
Sbjct: 530 SWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNI 589
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ +++ R + +R++KN+RIC DCH MK S +EI VRD+N
Sbjct: 590 LAVHSEKLAVALGLIST----RPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTN 645
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFKD CSC DYW
Sbjct: 646 RFHHFKDGKCSCGDYW 661
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 141/358 (39%), Gaps = 64/358 (17%)
Query: 103 FFPNEFSLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCADEAWK-VF 160
F P+ L S L SC + +HA A+ L +VA++L++ Y + A A + VF
Sbjct: 16 FPPDPHLLPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVF 75
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---------------------- 198
+ M +NV+ W+++IA + A A L +M++
Sbjct: 76 DRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRAL 135
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+A+ ++ EG PD S L A + VH + K G D + ALI
Sbjct: 136 DAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALI 195
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
Y +CG +VF + ++ D+ S N+++ + + Q EAL LF V+ +
Sbjct: 196 DMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVV 255
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-------------------- 355
++ S+++ C G E +F +M ++ GV P C
Sbjct: 256 SWTSIVACCVQNGRDLEAVDLFRTM-QSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCF 314
Query: 356 ---------------MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+VD+ + G+ A + MP + V W+ ++G HG+
Sbjct: 315 SLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSR-NVVSWNAMIGGYAMHGDA 371
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
L+ L+ PD LK+C + A A+H+ G +D +A++L+H+Y
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSYI 63
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
R G+ ++ VFD+M ++V W++++ Y+ G A+ A L M V+P+ T+
Sbjct: 64 RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
L+S + +G + M + G P +C + +G V +
Sbjct: 124 LVSGLNRSGRALDAVTALVRM-HSEGFFPDATGVSCALSAVGDVKEV 169
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/598 (37%), Positives = 335/598 (56%), Gaps = 29/598 (4%)
Query: 2 LHSTQI-YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+H Q Y + C G I+ Q+H I N D++V+ LI+MY+K+G LD
Sbjct: 342 IHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKN--GFESDMYVSGVLIDMYSKYGCLDK 399
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY 119
AR + + + KR+VVSWT++I+GY QH EE F + +P+ LAS +C
Sbjct: 400 ARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAG 459
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSM 174
+ G +HA A + + N L+N+Y++ ++EA+ +F +E ++ I+WN +
Sbjct: 460 IKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGL 519
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ F +L QA+ +F KM +F TF + A A L +
Sbjct: 520 ISGFGQSRLYKQALMVFMKMGQAGAKYNVF-------------TFISAISALANLADIKQ 566
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH K G +T +ANALI Y +CGSI +K +F +M+ + VSWN+I+ + +
Sbjct: 567 GKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQ 626
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG+ EAL LF M ++P+ TF+ +L+ACSH GLV+EG F SM +G+ P D
Sbjct: 627 HGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPD 686
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYAC+VD+LGR G++ A + + EMP+ +++IW LL +C+ H + ELAA L +L
Sbjct: 687 HYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLEL 746
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP DS +V +SN Y ++G + +RK MK +RK PG SWIE++N VH F G +
Sbjct: 747 EPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL 806
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP + I+K L EL +L +GY E H+ E+E K+ + HSEKLA+ F +M
Sbjct: 807 HPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLP 866
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R++KN+R+C DCH++MK S++ +EIV+RD RFHHF CSC DYW
Sbjct: 867 PCIP----LRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 211/418 (50%), Gaps = 28/418 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+L ACA G++++ QLH +++ D L+++Y K G ++ A +F+
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLK--AGMSFDYITEGSLLDLYVKCGDIETAHDIFNLG 306
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GK 123
+ NVV W ++ Y Q + + F +F + PN+F+ +L +C G+
Sbjct: 307 DRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGE 366
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H+L++K ++ +YV+ LI+MYSK C D+A K+ E +E R+V+SW SMIA
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAG----- 421
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ + EEAL F+++Q G+ PD + ACAG+ R +H+ +
Sbjct: 422 --------YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
G+ D I N L++ YARCG + +F ++ + D ++WN ++ + K+AL
Sbjct: 474 YVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQAL 533
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F M + + TF+S +SA ++ +++G +V H G + + ++ L
Sbjct: 534 MVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQV-HGRAVKTGHTSETEVANALISL 592
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPGD 415
G+ G I +A+ + EM + + V W+ ++ SC +HG A ++KQ L+P D
Sbjct: 593 YGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPND 649
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 193/393 (49%), Gaps = 25/393 (6%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
AC GN + + L H + D + N LI++YAK G + AR +F E+ R
Sbjct: 49 LQACRGRGN-RWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLHGKLVH 126
+ VSW A++SGYAQ G +E FRL+ + P + L+SVL +C + G+++H
Sbjct: 108 DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167
Query: 127 ALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A K + + +V NALI +Y A +VF +M F + +++N++I+ C
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCG--- 224
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ E AL +F ++Q G+ PD T + +L ACA + + +HS + K
Sbjct: 225 ----------HGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKA 274
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G D + +L+ Y +CG I + +F+ ++V WN +L AY ++ ++F
Sbjct: 275 GMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIF 334
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M + P+ T+ +L C+ G ++ G ++ HS+ +G + ++D+ +
Sbjct: 335 GQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
G + +A K++ EM + D V W+ ++ +H
Sbjct: 394 YGCLDKARKIL-EMLEKRDVVSWTSMIAGYVQH 425
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/663 (35%), Positives = 352/663 (53%), Gaps = 91/663 (13%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + C + N++ A L + M +D+ N +++ YA+ GY+ +A+ +FDE
Sbjct: 114 WNVMISGCVRYRNLRAARLLFDQM------PERDVVSWNAMLSGYAQNGYVKEAKEIFDE 167
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF------------CSLLQYFFPNEFSLA---- 111
MP +N +SW +++ Y Q+G E+ RLF C + Y N A
Sbjct: 168 MPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIF 227
Query: 112 -----------SVLISCDYLHGKLVHALAL-KFSLDAHVYVANALINMYSKSCA-DEAWK 158
+ +IS +G+L+ A L + S V+ A+++ Y ++ DEA +
Sbjct: 228 DRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARR 287
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--------------------- 197
VF+ M +N +SWN++IA + CK QA ELF M +
Sbjct: 288 VFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQA 347
Query: 198 ----------------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
EEAL LF +++R+G + TF+ L CA +
Sbjct: 348 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 407
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
VH + K G E + NAL+ Y +CG+I + VF+ + ++VSWN+++
Sbjct: 408 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 467
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA HG KEAL LF +M + PD T V +LSACSH GLV +G + F+SM +++G+
Sbjct: 468 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGI 527
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
HY CM+DLLGR GR+ +A+ L++ MP EPD+ W LLG+ R HG T L E AA
Sbjct: 528 TANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAK 587
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
+ ++EP +S +V +SN+Y SG + +R M+ V+K PG SW+E++N++H F
Sbjct: 588 MIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFT 647
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
G HP+R+ I+ LEEL ++K GYV T L LHD+EEE K L +HSEKLA+ F
Sbjct: 648 VGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFG 707
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
I+ ++ R IR++KN+R+C DCHN MK S ++G+ I++RDS+RFHHF CSC
Sbjct: 708 IL---AIPAGRP-IRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCG 763
Query: 587 DYW 589
DYW
Sbjct: 764 DYW 766
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 194/417 (46%), Gaps = 43/417 (10%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
S+ + + C + A QL E M +DL N +I+ ++ L AR
Sbjct: 78 RSSISWNAMISGCLSNDKFYLARQLFEKM------PTRDLVSWNVMISGCVRYRNLRAAR 131
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLH 121
LFD+MP+R+VVSW A++SGYAQ+G +E +F + P + S++ + +++ +
Sbjct: 132 LLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM-----PCKNSISWNGMLAAYVQN 186
Query: 122 GKLVHALAL-KFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G++ A L + D + N ++ Y K + +A +F+ M R+ +SWN+MI+ +
Sbjct: 187 GRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYA 246
Query: 180 ACK--LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
LEAQ + + +++ + + GM + + G+ E+++ +
Sbjct: 247 QNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDE------ARRVFDGM-PEKNSVS 299
Query: 238 VHSLIAKYG-----------FE----DDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
+++IA Y FE + N +I YA+ G I+ ++ FD+M D
Sbjct: 300 WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDS 359
Query: 283 VSWNSILKAYALHGQAKEALQLFSNMNVQPD---SATFVSLLSACSHAGLVQEGNKVFHS 339
+SW +I+ YA G +EAL LF M + +TF S LS C+ ++ G +V H
Sbjct: 360 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV-HG 418
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ G+ ++ + + G I +A ++ E E + V W+ ++ +HG
Sbjct: 419 RVVKAGLESGCYVGNALLVMYCKCGNIDDA-YIVFEGIEEKEVVSWNTMIAGYARHG 474
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 75/413 (18%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++ +TNH+ N G D A LF+ MP+R+ +SW A+ISG + + F L L
Sbjct: 53 NIAITNHMRN-----GQCDSALRLFNSMPRRSSISWNAMISGCLSN----DKFYLARQLF 103
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMYSKSC-ADEAWK 158
+ + +V+IS + L A L + V+ NA+++ Y+++ EA +
Sbjct: 104 EKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKE 163
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F+ M +N ISWN M+AA + + E+A LF DW
Sbjct: 164 IFDEMPCKNSISWNGMLAA-------------YVQNGRIEDARRLFES------KADW-- 202
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+ + N ++ Y + + ++ +FD+M
Sbjct: 203 -------------------------------ELISWNCMMGGYVKRNRLVDARGIFDRMP 231
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
D VSWN+++ YA +G+ EA +LF V+ D T+ +++S G++ E +VF
Sbjct: 232 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVR-DVFTWTAMVSGYVQNGMLDEARRVFD 290
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
M E + V + ++ + R+ +A +L MP + S W+ ++ ++G+
Sbjct: 291 GMPEKNSV-----SWNAIIAGYVQCKRMDQARELFEAMPCQNVSS-WNTMITGYAQNGDI 344
Query: 399 RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK--GSRVRK 449
A ++ Q DS+ + + Y SG +A + EMK G R+ +
Sbjct: 345 AQARNFFDRMPQR---DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 394
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 39/271 (14%)
Query: 132 FSLDAHVYVAN-ALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+ DA + N A+ N D A ++F +M R+ ISWN+MI+ C
Sbjct: 43 LATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISG---C--------- 90
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
+ N++ +L RQL + D ++++++ C V R+ A L + E D
Sbjct: 91 ---LSNDK--FYLARQLFEKMPTRDLVSWNVMISGC---VRYRNLRAARLLFDQMP-ERD 141
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
V NA++ YA+ G + +K++FD+M + +SWN +L AY +G+ ++A +LF +
Sbjct: 142 VVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES--- 198
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV---VPQLDH--YACMVDLLGRVGR 365
A + + C G V+ + +++ G+ +P+ D + M+ + G
Sbjct: 199 ---KADWELISWNCMMGGYVKR-----NRLVDARGIFDRMPERDEVSWNTMISGYAQNGE 250
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+LEA++L E P+ D W+ ++ ++G
Sbjct: 251 LLEAQRLFEESPVR-DVFTWTAMVSGYVQNG 280
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
T D+V WN + + +GQ AL+LF++M + S ++ +++S C ++F
Sbjct: 45 TDADIVKWNIAITNHMRNGQCDSALRLFNSM-PRRSSISWNAMISGCLSNDKFYLARQLF 103
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVG-RILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
M P D + V + G V R L A +L+ + E D V W+ +L ++G
Sbjct: 104 EKM-------PTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNG 156
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
+ A+ ++ +S+ + M Y +G AR
Sbjct: 157 YVKEAK---EIFDEMPCKNSISWNGMLAAYVQNGRIEDAR 193
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/560 (38%), Positives = 332/560 (59%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ +N LINMY+K +D AR F+EMP +++VSW +I Q+ E +L +
Sbjct: 77 DILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQ 136
Query: 101 QYFFP-NEFSLASVLISCDY----LHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ P NEF+++SVL +C + L +HA ++K ++D++ +V AL+++Y+K S
Sbjct: 137 REGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIK 196
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A ++FE+M +N ++W+SM+A + + EEAL +FR Q G
Sbjct: 197 DASQMFESMPEKNAVTWSSMMAGY-------------VQNGFHEEALLIFRNAQLMGFDQ 243
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D S + ACAGL T VH++ K GF + ++++LI YA+CG I + VF
Sbjct: 244 DPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVF 303
Query: 275 DK-MTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLV 330
+ +V WN+++ +A H +A EA+ LF M + PD T+V +L+ACSH GL
Sbjct: 304 QGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLH 363
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG K F M+ H + P + HY+CM+D+LGR G + +A LI MP S +W LL
Sbjct: 364 EEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLA 423
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
SC+ +G AE+AA L ++EP ++ + ++NIY + +++ RK ++ + VRK
Sbjct: 424 SCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKE 483
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G SWIEI+N++H F G + HPQ + I+ KL+ L+ +LK + Y +TS LHD+EE K
Sbjct: 484 RGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENRK 543
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
+ L HHSEKLA+ F +M C R + IRI+KN+RIC DCH FMKL S +EI+V
Sbjct: 544 QMLLRHHSEKLAITFGLM-----CLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIV 598
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFKD CSC ++W
Sbjct: 599 RDTNRFHHFKDGFCSCGEFW 618
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 18/295 (6%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ G+ HA ++ L+ + +N LINMYSK S D A K F M ++++SWN++I A
Sbjct: 60 MGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGA- 118
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ + EAL L Q+QREG + T S VL CA +
Sbjct: 119 ------------LTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQL 166
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K + + + AL+H YA+C SI + Q+F+ M + V+W+S++ Y +G
Sbjct: 167 HAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFH 226
Query: 299 KEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL +F N M D S +SAC+ + EG +V H++ G + +
Sbjct: 227 EEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQV-HAISHKSGFGSNIYVSSS 285
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
++D+ + G I EA + + + V+W+ ++ +H A + K++Q
Sbjct: 286 LIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQ 340
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
+L+ CA + A H+ I + G E D + +N LI+ Y++C + +++ F++M
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFH 338
LVSWN+++ A + + +EAL+L M + + T S+L C+ + E ++ H
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQL-H 167
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + ++ + + I +A ++ MP E ++V WS ++ ++G
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMAGYVQNG 224
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE-MPKRN 72
ACA + + Q+H I++ +++V++ LI+MYAK G + +A +F + R+
Sbjct: 254 ACAGLATLIEGKQVHA--ISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRS 311
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY--LH---GKLVH 126
+V W A+ISG+A+H A E LF + Q FFP++ + VL +C + LH K
Sbjct: 312 IVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFD 371
Query: 127 ALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVIS-WNSMIAAFRACKL 183
+ + +L V + +I++ ++ +A+ + E M F S W S++A +CK+
Sbjct: 372 LMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLA---SCKI 427
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/594 (37%), Positives = 349/594 (58%), Gaps = 42/594 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGY---LDDARHLF 65
+++ AC G+++ +QLH + D V+ L++MYAK +D A +F
Sbjct: 258 SSMISACTELGSVRLGLQLHSLALRM--GLASDACVSCGLVDMYAKSNIGQAMDYANKVF 315
Query: 66 DEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLL-QYFFPNEFSLASVLISC----DY 119
+ MPK +V+SWTALISGY Q G E + LF +L + PN + +S+L SC D+
Sbjct: 316 ERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDH 375
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAF 178
G+ VHA +K + + V NAL++MY++S C +EA +VF + R++I
Sbjct: 376 DSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI--------- 426
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C E + L ++ R + TF+ ++ A A + +
Sbjct: 427 -PCITEGRDFPLD-------------HRIVRMDVGISSSTFASLISAAASVGMLTKGQQL 472
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H++ K GF D ++N+L+ Y+RCG + + + F+++ +++SW S++ A HG A
Sbjct: 473 HAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYA 532
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+ AL LF +M V+P+ T++++LSACSH GLV+EG + F SM +HG++P+++HYAC
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDLL R G + EA + I EMP++ D+++W LLG+CR H + E+ A + +LEP D
Sbjct: 593 MVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRD 652
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+V +SN+Y +G +++ IR M+ + + K GLSW+E+EN HEF +G HP+
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+ KL+ L+ Q+KGMGYVP+TS+ LHD+ +E KE+ L HSEK+A+ F ++ +
Sbjct: 713 QDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSA--- 769
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+C DCH+ +K S +EI++RDSNRFH KD CSC +YW
Sbjct: 770 -PKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 190/386 (49%), Gaps = 32/386 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V + LI+M A+ G L AR +FD + ++ VV WT LIS Y Q AEE LF L
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 101 QYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKS---- 151
+ F P+ ++++S++ +C L G +H+LAL+ L + V+ L++MY+KS
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D A KVFE M +VISW ++I+ + ++ E + + LF ++ E
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQ------------ENKVMALFGEMLNES 354
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P+ T+S +LK+CA + VH+ + K + NAL+ YA G + ++
Sbjct: 355 IKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEAR 414
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQ 331
+VF+++ ++ + + + L + M+V S+TF SL+SA + G++
Sbjct: 415 RVFNQLYERSMIPCITEGRDFPLDHR-------IVRMDVGISSSTFASLISAAASVGMLT 467
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + H+M G +V + R G + +A + E+ + + + W+ ++
Sbjct: 468 KGQQ-LHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELK-DRNVISWTSMISG 525
Query: 392 CRKHG--ETRLAELAATKLKQLEPGD 415
KHG E L+ L ++P D
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPND 551
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 162/337 (48%), Gaps = 36/337 (10%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWT 77
G+++ LH ++ + +D V N L+ +Y++ G + AR++FD M R++VSWT
Sbjct: 62 GDLRLGRALHRRLLRGDLLD-RDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWT 120
Query: 78 ALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC---------DYLHGKLVHA 127
A+ S A++G L +L+ PN ++L + +C + LVH
Sbjct: 121 AMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHK 180
Query: 128 LALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
+ L V V +ALI+M +++ A KVF+ + + V+ W +I+
Sbjct: 181 MGL---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISR--------- 228
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
+ + + EEA+ LF +G PD T S ++ AC L + R +HSL + G
Sbjct: 229 ----YVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMG 284
Query: 247 FEDDTVIANALIHAYARCG---SISLSKQVFDKMTYHDLVSWNSILKAYALHG-QAKEAL 302
D ++ L+ YA+ ++ + +VF++M +D++SW +++ Y G Q + +
Sbjct: 285 LASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVM 344
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
LF M +++P+ T+ S+L +C+ G +V
Sbjct: 345 ALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQV 381
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 41/350 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+++ +CA + Q+H H+I + N+ V N L++MYA+ G +++AR +F++
Sbjct: 362 YSSILKSCASISDHDSGRQVHAHVIKS--NQASAHTVGNALVSMYAESGCMEEARRVFNQ 419
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL-HGKLVH 126
+ +R+++ I+ R+ + F SL S S L G+ +H
Sbjct: 420 LYERSMI---PCITEGRDFPLDHRIVRMDVGISSSTFA---SLISAAASVGMLTKGQQLH 473
Query: 127 ALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A++LK + +V+N+L++MYS+ C ++A + F ++ RNVISW SMI+
Sbjct: 474 AMSLKAGFGSDRFVSNSLVSMYSR-CGYLEDACRSFNELKDRNVISWTSMISG------- 525
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE-----RHASA 237
AK E AL LF + G+ P+ T+ VL AC+ GLV E R
Sbjct: 526 ------LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR 579
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHG 296
H LI + E + + L AR G + + + ++M D + W ++L A H
Sbjct: 580 DHGLIPR--MEHYACMVDLL----ARSGIVKEALEFINEMPLKADALVWKTLLGACRSHD 633
Query: 297 QAKEALQLFSN-MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
+ N + ++P D A +V L + + AGL E ++ +M +N+
Sbjct: 634 NIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNN 683
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S+ +A+L A A G + + QLH + D FV+N L++MY++ GYL+DA
Sbjct: 449 SSSTFASLISAAASVGMLTKGQQLHAMSLK--AGFGSDRFVSNSLVSMYSRCGYLEDACR 506
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL 120
F+E+ RNV+SWT++ISG A+HG AE LF + L PN+ + +VL +C ++
Sbjct: 507 SFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHV 564
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 233 RHASAVHSLIAKYGFED-DTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILK 290
R A+H + + D D V+AN+L+ Y+RCG+++ ++ VFD M D+VSW ++
Sbjct: 65 RLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMAS 124
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV- 346
A +G + +L L M + P++ T + AC L V ++ G+
Sbjct: 125 CLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLW 184
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ + ++D+L R G + A K+ + +E V+W++L+
Sbjct: 185 GTDVAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLI 226
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/568 (39%), Positives = 330/568 (58%), Gaps = 35/568 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV++ LI MY+ G L+DAR +FDE+PKRN+VSWT++I GY +GNA + LF L
Sbjct: 109 SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL 168
Query: 100 L-------QYFFPNEFSLASVLISCDYLHGK----LVHALALKFSLDAHVYVANALINMY 148
L F + + SV+ +C + K +H+ +K D V V N L++ Y
Sbjct: 169 LIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 149 SKSCADE---AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
+K A K+F+ + ++ +S+NS+++ ++A+ EA +FR
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMS-------------VYAQSGMSNEAFDVFR 275
Query: 206 QLQREGMAPDWC-TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
+L +E + C T S VL A + R +H + + G EDD ++ ++I Y +C
Sbjct: 276 RLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
G + ++ FD+M ++ SW +++ Y +HG A +AL+LF M V+P+ TFVS+L
Sbjct: 336 GRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
+ACSHAGL G F++M GV P L+HY CMVDLLGR G + +A LI++M MEPD
Sbjct: 396 AACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPD 455
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
S+IWS LL +CR H LAE++ +L +L+P + ++ +S+IY SG + +R
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMT 515
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
MK + K PG S +E+ VH F G + HPQRE I++ L EL +L GYV TS
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
HD++EE KE L HSEKLA+ F IMN S + ++KN+R+C DCHN +KL S
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMNT----VPGSTVNVVKNLRVCSDCHNVIKLISK 631
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ +E VVRD+ RFHHFKD CSC DYW
Sbjct: 632 IVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 171/345 (49%), Gaps = 29/345 (8%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
+ K +V SW ++I+ A+ G++ E R F S+ + +P S + +C D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
K H A F + ++V++ALI MYS +C ++A KVF+ + RN++SW SMI +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYS-TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 181 CKLEAQAIELFAKM---KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
A+ LF + +N+++A L GM V+ AC+ + + +
Sbjct: 155 NGNALDAVSLFKDLLIEENDDDATMF---LDSMGMVS-------VISACSRVAAKGLTES 204
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARC--GSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+HS + K GF+ + N L+ AYA+ G +++++++FD++ D VS+NSI+ YA
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 296 GQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G + EA +F + V + T ++L A SH+G ++ G K H + G+ +
Sbjct: 265 GMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVI 323
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + GR+ E +L + + W+ ++ HG
Sbjct: 324 VGTSIIDMYCKCGRV-ETARLAFDRMKNKNVRSWTAMIAGYGMHG 367
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/561 (38%), Positives = 332/561 (59%), Gaps = 26/561 (4%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
E D FV +++MYAKFG + DAR +FD + ++VV +TALI GY Q G E +F
Sbjct: 133 EVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFE 192
Query: 98 SLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-S 151
++ PNE++LASVL+SC D ++GKL+H L +K L++ V +L+ MYSK +
Sbjct: 193 DMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCN 252
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+++ KVF ++ + + ++W S I + EE AL +FR++ R
Sbjct: 253 MVEDSIKVFNSLAYASHVTWTSFIVGL-------------VQNGREEIALSMFREMIRCS 299
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
++P+ TFS +L AC+ L +H++ K G + + + ALIH Y +CG++ ++
Sbjct: 300 ISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKAR 359
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAG 328
VF+ +T D+VS N+++ AYA +G EAL+LF M +P+ TF+S+L AC++AG
Sbjct: 360 SVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAG 419
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV+EG ++F + NH + DHY CM+DLLGR R EA LI E PD + W L
Sbjct: 420 LVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEE-GKNPDVIQWRTL 478
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +C+ HGE +AE K+ P D + ++NIY +G ++ ++ + R++
Sbjct: 479 LNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLK 538
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K P +SW++I+ VH F +G HP+ I + L ELI ++ +GY P+T L D+EEE
Sbjct: 539 KTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEE 598
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K LY+HSEKLA+ FA+ C + + IRI KN+R+C DCH+++K S L G++I+
Sbjct: 599 KKISALYYHSEKLAIAFALWKT---CGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDII 655
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
RD+ RFHHFK ICSC DYW
Sbjct: 656 ARDAKRFHHFKGGICSCKDYW 676
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 180/364 (49%), Gaps = 25/364 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-Q 101
F + LI+ Y K + +AR LFDEMP R++V+W ++IS + G +E L+ ++L +
Sbjct: 36 FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFE 95
Query: 102 YFFPNEFSLASVLISCDYL----HGKLVHALALKFSLD-AHVYVANALINMYSK-SCADE 155
P+ ++ +++ + + G+ H LA+ + + +VA +++MY+K +
Sbjct: 96 GVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKD 155
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A VF+ + ++V+ + ++I + L+ +A+E+F M + P+
Sbjct: 156 ARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSR-------------IKPN 202
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T + VL +C L + +H L+ K G E +L+ Y++C + S +VF+
Sbjct: 203 EYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFN 262
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+ Y V+W S + +G+ + AL +F M ++ P+ TF S+L ACS +++
Sbjct: 263 SLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEA 322
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G ++ H++ GV A ++ L G+ G + +A + + E D V + ++ +
Sbjct: 323 GEQI-HAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLT-ELDVVSINTMIYAY 380
Query: 393 RKHG 396
++G
Sbjct: 381 AQNG 384
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/596 (38%), Positives = 349/596 (58%), Gaps = 31/596 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ ++Y + ACA N++ A ++H H+ ++ D F+ N LI+MY K + DAR+
Sbjct: 50 TPRVYRSFITACAQSKNLEDARKIHAHLGSS--RFAGDAFLDNSLIHMYCKCRSVLDARN 107
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----D 118
+FD+M ++++VSWT+LI+GYAQ+ E L +L+ F PN F+ AS+L + D
Sbjct: 108 VFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYAD 167
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G+ +HALA+K VYV +AL++MY++ C D A VF+ ++ +N +SWN++I+
Sbjct: 168 SGTGRQIHALAVKCGWHEDVYVGSALLDMYAR-CGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F A+ + E AL F ++ R G T+S V + A L
Sbjct: 227 GF-------------ARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGK 273
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH+ + K + + N L+ YA+ GS+ +++VFD++ DLV+WNS+L A+A +G
Sbjct: 274 WVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYG 333
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
KEA+ F M V + TF+ +L+ACSH GLV+EG + F M++ + + P++DHY
Sbjct: 334 LGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHY 392
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+V LLGR G + A I +MPMEP + +W LL +CR H ++ + AA + +L+P
Sbjct: 393 VTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDP 452
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
DS V + NIY +G ++ A +R MK + V+K P SW+E+EN VH F + HP
Sbjct: 453 DDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHP 512
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
Q E I+K E+ +++ GYVP+ L ++++ KE L +HSEKLAL FA++ +
Sbjct: 513 QAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPA- 571
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRIMKNIRIC DCH+ K S + G+EIVVRD+NRFHHF CSC DYW
Sbjct: 572 ---GATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+AP + + ACA A +H+ + F D + N+LIH Y +C S+ ++
Sbjct: 47 LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
VFD+M D+VSW S++ YA + EA+ L M +P+ TF SLL A
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
G ++ H++ G + + ++D+ R G++ A + ++ + + V W+ L
Sbjct: 167 DSGTGRQI-HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NGVSWNAL 224
Query: 389 L-GSCRK-HGETRLAELA 404
+ G RK GE+ L A
Sbjct: 225 ISGFARKGDGESALMTFA 242
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/556 (39%), Positives = 325/556 (58%), Gaps = 29/556 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QY 102
+ L++MYAK G L AR LFD M +RNVVSW ++I Y Q+ N +E +F +L +
Sbjct: 273 IATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEG 332
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEA 156
P + S+ L +C D G+ +H L+++ LD +V V N+LI+MY K C D A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCK-CKEVDTA 391
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+F ++ R ++SWN+MI F A+ EAL F Q+Q + PD
Sbjct: 392 ASMFGKLQSRTIVSWNAMILGF-------------AQNGRPIEALNYFSQMQARTVKPDT 438
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T+ V+ A A L HA +H ++ + + + + AL+ YA+CG+I +++ +FD
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 498
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M+ + +WN+++ Y HG K AL+LF M ++P+ TF+S++SACSH+GLV+ G
Sbjct: 499 MSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAG 558
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K FH M EN+ + P +DHY MVDLLGR GR+ EA I +MP++P ++ +LG+C+
Sbjct: 559 LKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H AE A +L +L P D V ++NIY + + K +R M +RK PG
Sbjct: 619 IHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 678
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S +EI+N VH F SG HP + I+ LE+LI Q+K GYVP+T+L L +E++ KE+
Sbjct: 679 SMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQL 737
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F ++N + + I + KN+R+C DCHN K S + G+EI+VRD
Sbjct: 738 LSSHSEKLAISFGLLNTTA----GTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQ 793
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFK+ CSC DYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 149/304 (49%), Gaps = 24/304 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q+ L++++ ++G +D+A +F+ + K+ V + ++ G+A+ + ++ + F +
Sbjct: 67 QEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRM 126
Query: 100 L-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-- 152
P ++ +L C + GK +H L +K ++ L NMY+K C
Sbjct: 127 RDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK-CRQ 185
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
EA KVF+ M R+++SWN+++A + + A+E+ M E +
Sbjct: 186 VHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLM-------------CEENL 232
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P + T VL A + L R +H + GF+ IA AL+ YA+CGS+ ++
Sbjct: 233 KPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARL 292
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
+FD M ++VSWNS++ AY + KEA+ +F M V+P + + L AC+ G
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 330 VQEG 333
++ G
Sbjct: 353 LERG 356
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 33/306 (10%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
HACA G++++ +H+ + +++ V N LI+MY K +D A +F ++ R
Sbjct: 344 LHACADLGDLERGRFIHKLSVE--LELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVH 126
+VSW A+I G+AQ+G E F + + P+ F+ SV+ + L H K +H
Sbjct: 402 TIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ ++ LD +V+V AL++MY+K A A +F+ M R+V +WN+MI + +
Sbjct: 462 GVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGK 521
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIA 243
A+ELF +M Q+ + P+ TF V+ AC +GLV E H +
Sbjct: 522 AALELFEEM-------------QKGTIRPNGVTFLSVISACSHSGLV-EAGLKCFHMMKE 567
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
Y E A++ R G ++ + D + + A ++G A Q
Sbjct: 568 NYSIEPSMDHYGAMVDLLGRAGRLNEA---------WDFIMQMPVKPAVNVYGAMLGACQ 618
Query: 304 LFSNMN 309
+ N+N
Sbjct: 619 IHKNVN 624
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 26/319 (8%)
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFFPN--EFSLASVLISCDYLHGKLVHALALKFS---L 134
+S +Q R F S Y N E A +L C L +L H L L F
Sbjct: 8 VSTVSQIPPISSSHRHFLSQRNYIPANVYEHPAALLLERCSSLK-ELRHILPLIFKNGLY 66
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
H++ L++++ + DEA +VFE ++ + + + +M+ F AK
Sbjct: 67 QEHLF-QTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGF-------------AK 112
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+ + ++AL F +++ + + P F+ +LK C R +H L+ K GF D
Sbjct: 113 VSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
L + YA+C + +++VFD+M DLVSWN+I+ Y+ +G A+ AL++ + M N+
Sbjct: 173 MTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENL 232
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+P T VS+L A S L++ G ++ H G ++ +VD+ + G L+
Sbjct: 233 KPSFITIVSVLPAVSALRLIRIGKEI-HGYAMRAGFDSLVNIATALVDMYAKCGS-LKTA 290
Query: 371 KLIREMPMEPDSVIWSVLL 389
+L+ + +E + V W+ ++
Sbjct: 291 RLLFDGMLERNVVSWNSMI 309
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/615 (36%), Positives = 350/615 (56%), Gaps = 52/615 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I ++ AC+ + ++H + N D+FV N L+ MY++ G L AR LFD
Sbjct: 111 IIPSVLKACSQISVARMGKEIHGFSVKN--GLVSDVFVVNALMQMYSECGSLVSARLLFD 168
Query: 67 EMPKRNVVSW----------------------TALISGYAQHGNAEECFRLFCSLLQ-YF 103
+M +R+VVSW TA+I+GY + + EE RLF +++
Sbjct: 169 KMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENV 228
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAW 157
FPN+ ++ S++ISC ++ GK +HA L+ + +A AL++MY K C + A
Sbjct: 229 FPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGK-CGEIRSAR 287
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F++M+ ++V++W +MI+A+ A +LF +M++ G+ P+
Sbjct: 288 AIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN-------------GVRPNEL 334
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T +L CA H+ I K G E D ++ ALI YA+CG IS ++++F +
Sbjct: 335 TMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEA 394
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
D+ +WN ++ Y +HG ++AL+LF+ M V+P+ TF+ L ACSHAGLV EG
Sbjct: 395 IDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGK 454
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+F M+ + G+VP+++HY CMVDLLGR G + EA K+I MP+ P+ IW +L +C+
Sbjct: 455 GLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKI 514
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H + + ELAA +L LEP + V MSNIY + +N +RK +K + ++K PG+S
Sbjct: 515 HKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMS 574
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
IE+ VH+F G HP E I + L E+ +LK GY+P+TS+ LH+I+EE KE L
Sbjct: 575 SIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETAL 634
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
+HSEKLA+ F +++ + IR++KN+RIC DCH KL S + + I+VRD NR
Sbjct: 635 NYHSEKLAMAFGLISTAP----GTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNR 690
Query: 575 FHHFKDRICSCNDYW 589
FHHF++ CSC YW
Sbjct: 691 FHHFREGSCSCGGYW 705
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
AL + +++ + D VLKAC+ + R +H K G D + NAL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA--LHGQAKEAL--------------- 302
Y+ CGS+ ++ +FDKM+ D+VSW+++++AY +G ++ ++
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 303 -----QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+LF M NV P+ T +SL+ +C G VQ G ++ H+ + +G L
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRL-HAYILRNGFGMSLALAT 271
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+VD+ G+ G I A + M D + W+ ++ +
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA 307
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/599 (36%), Positives = 346/599 (57%), Gaps = 30/599 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ Y L +C ++ Q + LH H+I++ QD F+ LINMY++ +D+AR
Sbjct: 77 TQHTYELLILSCTRQNSLPQGIDLHRHLIHD--GSDQDPFLATKLINMYSELDSIDNARK 134
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISCD---- 118
+FD+ KR + W AL G E L+ + + P++ F+ VL +C
Sbjct: 135 VFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEA 194
Query: 119 ----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
L+G+ +H L+ + HV++ L++MY++ C A +VF+ M +NV+SW++
Sbjct: 195 FVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSA 254
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MIA + +A+ELF KM L+ + + P+ T VL+ACA L
Sbjct: 255 MIACYSKNGKPLEALELFRKM-----------MLENQDLLPNSVTMVSVLQACAALAALE 303
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H I + G + + +AL+ YARCG++ L +VF++M D+VSWNS++ +Y
Sbjct: 304 QGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYG 363
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+HG ++A+Q+F M + P +FVS+L ACSHAGLV+EG +F SM+ H + P +
Sbjct: 364 IHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSV 423
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HYACMVDLLGR R+ EA K+I +M +EP +W LLGSCR H LAE A ++L +
Sbjct: 424 EHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFE 483
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP ++ +V +++IY + +N+ + ++ ++ ++K PG S IEI +++ F S +
Sbjct: 484 LEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDE 543
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+PQ E + L +L ++K GYVP+T + L+D++ E KE + HSEKLAL F ++N
Sbjct: 544 FNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINS 603
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ IRI KN+R+C DCH+ K S +EI+VRD NRFH F+D +CSC DYW
Sbjct: 604 ----KKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/588 (38%), Positives = 344/588 (58%), Gaps = 28/588 (4%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ CA +G + +A H +I + D+ + N LIN Y+K G+++ AR +FD M +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIR--IDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE 124
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVL----ISCDYLHGKLV 125
R++VSW +I Y ++ E +F + F +EF+++SVL ++CD L K +
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H L++K +D ++YV AL+++Y+K +A +VFE+M+ ++ ++W+SM+A +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY------ 238
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ KN EEAL L+R+ QR + + T S V+ AC+ L +H++I K
Sbjct: 239 -------VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GF + +A++ + YA+CGS+ S +F ++ +L WN+I+ +A H + KE + L
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M + P+ TF SLLS C H GLV+EG + F M +G+ P + HY+CMVD+LG
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G + EA +LI+ +P +P + IW LL SCR + LAE+AA KL +LEP ++ V
Sbjct: 412 RAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVL 471
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY + + + RK ++ V+K G SWI+I+++VH F+ G HP+ I
Sbjct: 472 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 531
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L+ L+ + + GY P LHD+E KEE L HSEKLALVF +M E S +R
Sbjct: 532 LDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLM----CLPESSPVR 587
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IMKN+RICVDCH FMK AS + I+VRD NRFHHF D CSC D+W
Sbjct: 588 IMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/621 (37%), Positives = 350/621 (56%), Gaps = 60/621 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFG------ 56
++ +L A L + A LH +I +F DL+ N L+NMY+KF
Sbjct: 77 HLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHF-----DLYTANALMNMYSKFHPHLSPL 131
Query: 57 ----------------YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
+D R LFD MP R+VVSW +I+G AQ+G EE + +
Sbjct: 132 HEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMG 191
Query: 100 LQYFFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
+ P+ F+L+S+L + GK +H A++ D V++ ++LI+MY+K C
Sbjct: 192 KENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAK-CTQV 250
Query: 156 AWKV--FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
V F + R+ ISWNS+IA C + ++ L FR++ +E +
Sbjct: 251 ELSVCAFHLLSNRDAISWNSIIAG---CVQNGRF----------DQGLGFFRRMLKEKVK 297
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P +FS V+ ACA L +H+ I + GF+D+ IA++L+ YA+CG+I +++ +
Sbjct: 298 PMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYI 357
Query: 274 FDK--MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
F+K M D+VSW +I+ A+HG A +A+ LF M V+P F+++L+ACSHAG
Sbjct: 358 FNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAG 417
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV EG K F+SM + GV P L+HYA + DLLGR GR+ EA I M EP +WS L
Sbjct: 418 LVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTL 477
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +CR H LAE K+ ++PG+ V MSNIY + + A +R M+ + ++
Sbjct: 478 LAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLK 537
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K P SWIE+ N+VH F +G K HP + I + L L+ Q++ GYV +T+ LHD++EE
Sbjct: 538 KTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEE 597
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
HK + L HSE+LA+ F I++ S + IR++KNIR+CVDCH +K + ++G+EI+
Sbjct: 598 HKRDLLRTHSERLAIAFGIISTTS----GTTIRVIKNIRVCVDCHTAIKFMAKIVGREII 653
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD++RFHHFK+ CSC DYW
Sbjct: 654 VRDNSRFHHFKNGSCSCGDYW 674
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 338/598 (56%), Gaps = 37/598 (6%)
Query: 21 IKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
+K +LH+H++ F + ++FV N LI++Y+ G + AR +FD K +VV+W +
Sbjct: 135 VKCGRELHDHIVKLGFSS---NVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVM 191
Query: 80 ISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
ISGY + +E +LF + + P+ +L SVL +C L GK VH +
Sbjct: 192 ISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKI 251
Query: 135 DAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ + NALI+MY+ +C D A +F+NM+ R+VISW +++ F A F
Sbjct: 252 EPVRVLENALIDMYA-ACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFD 310
Query: 193 KMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
KM + E L LFR++Q + PD T +L ACA L
Sbjct: 311 KMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALEL 370
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+ + I K + D+ + NALI Y CG++ + ++F+ M + D +SW +++ A+
Sbjct: 371 GEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAI 430
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+G +EAL +FS M ++ PD T + +L AC+H+G+V +G K F M HG+ P +
Sbjct: 431 NGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVA 490
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY CMVDLLGR G + EA ++I+ MP++P+S++W LLG+CR H + +AE+AA ++ +L
Sbjct: 491 HYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILEL 550
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP + +V + NIY + K +RK M ++K PG S IE+ VHEF +G +
Sbjct: 551 EPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQV 610
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HPQ + I+ KL+E+ LK GY P+TS DI EE KE +Y HSEKLA+ F +++ G
Sbjct: 611 HPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSG 670
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KN+R+CVDCH KL S + +E++VRD RFHHF+ CSC DYW
Sbjct: 671 P----GVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 172/382 (45%), Gaps = 67/382 (17%)
Query: 54 KFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLAS 112
+ G ++ AR +FD MP N W +I GY++ G ++C +L+ P+E++
Sbjct: 65 ELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPF 124
Query: 113 VL--------ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENM 163
+L + C G+ +H +K ++V+V NALI++YS S A VF+
Sbjct: 125 LLKRFTRDTAVKC----GRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRS 180
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
+V++WN MI+ + + K +E++ LF +++R + P T VL
Sbjct: 181 SKGDVVTWNVMISGYN-------------RSKQFDESMKLFDEMERMRVLPSSITLVSVL 227
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS----------------- 266
AC+ L VH + E V+ NALI YA CG
Sbjct: 228 SACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVI 287
Query: 267 --------------ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ L++ FDKM D VSW +++ Y + KE L LF M N
Sbjct: 288 SWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAAN 347
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRIL 367
++PD T VS+L+AC+H G ++ G + + +N ++D + ++D+ G +
Sbjct: 348 IKPDEFTMVSILTACAHLGALELGEWIKAYIDKNE---IKIDSFVGNALIDMYFNCGNVE 404
Query: 368 EAEKLIREMPMEPDSVIWSVLL 389
+A ++ MP D + W+ ++
Sbjct: 405 KAIRIFNAMPHR-DKISWTAVI 425
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 21/293 (7%)
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
VF+ M N WN+MI + A+ ++ +M L+R G+ PD T
Sbjct: 75 VFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEM------------LER-GVMPDEYT 121
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+ +LK + +H I K GF + + NALIH Y+ G +S+++ VFD+ +
Sbjct: 122 YPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSS 181
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNK 335
D+V+WN ++ Y Q E+++LF M V P S T VS+LSACS + G +
Sbjct: 182 KGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKR 241
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
V H +++ + P ++D+ G + A + M D + W+ ++
Sbjct: 242 V-HRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTGFTNL 299
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
G+ LA K+ + D + + M + Y F + + +EM+ + ++
Sbjct: 300 GQVGLARNYFDKMPER---DFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/591 (37%), Positives = 332/591 (56%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + C G I Q+H I N D++V+ LI+MY+K+G+LD A+ + D
Sbjct: 348 YPCMLRTCTHTGEIGLGEQIHSLTIKN--GFQSDMYVSGVLIDMYSKYGWLDKAQRILDM 405
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYL----HG 122
+ +++VVSWT++I+GY QH +E F + +P+ LAS + +C + G
Sbjct: 406 IEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQG 465
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HA A V + N L+ +Y++ + EA+ FE +E + I+WN +I+ F
Sbjct: 466 SQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQS 525
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L +A+++F KM +F TF + A A L + +H+
Sbjct: 526 GLYEEALKVFMKMDQAGAKYNVF-------------TFVSSISASANLADIKQGKQIHAR 572
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G+ +T I+NALI Y +CGSI +K F +MT + VSWN+I+ + HG+ EA
Sbjct: 573 VIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEA 632
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L LF M Q P TFV +L+ACSH GLV+EG F SM HG+ P+ DHYAC+VD
Sbjct: 633 LDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVD 692
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+LGR G++ A++ + EMP+ DS++W LL +C+ H + E AA L +LEP DS
Sbjct: 693 ILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSAS 752
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SN Y ++G + IRK MK VRK PG SWIE++N VH F G + HP + I
Sbjct: 753 YVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQI 812
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ L L +L +GY E H+ E+E K+ + HSEKLA+ F +M+ S C
Sbjct: 813 YNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPS-CMP-- 869
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R++KN+R+C DCH +MK S ++G+EIV+RD RFHHF + CSC DYW
Sbjct: 870 -LRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 216/421 (51%), Gaps = 34/421 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+L AC+ G++++ QLH +++ D + L+++Y K G +++A +FD
Sbjct: 248 ASLLAACSAVGDLRKGKQLHSYLLK--AGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSG 305
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GK 123
+ NVV W ++ Y Q + + F +F +L PN+F+ +L +C + G+
Sbjct: 306 DRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGE 365
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF---R 179
+H+L +K + +YV+ LI+MYSK D+A ++ + +E ++V+SW SMIA +
Sbjct: 366 QIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHE 425
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
CK EAL F+++Q G+ PD + + ACAG+ S +H
Sbjct: 426 FCK----------------EALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIH 469
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + G+ D I N L++ YARCG + F+ + + + ++WN ++ +A G +
Sbjct: 470 ARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYE 529
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL++F M+ + + TFVS +SA ++ +++G ++ H+ + G + + +
Sbjct: 530 EALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQI-HARVIKTGYTSETEISNAL 588
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPG 414
+ L G+ G I +A+ EM + + V W+ ++ C +HG A ++KQ L+P
Sbjct: 589 ISLYGKCGSIEDAKMDFFEM-TKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPS 647
Query: 415 D 415
D
Sbjct: 648 D 648
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 190/365 (52%), Gaps = 30/365 (8%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+ N LI++YAK G++ AR +F+E+ R+ VSW A++SGYAQ+G EE RL+ + +
Sbjct: 78 IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS 137
Query: 103 -FFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMY----SKSCA 153
P + L+S+L +C + G+L+H K + +V NALI++Y S A
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D +VF +M + + +++N++I+ C + + AL +F ++Q G++
Sbjct: 198 D---RVFCDMLYCDSVTFNTLISGHAQCG-------------HGDRALGIFDEMQLSGLS 241
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T + +L AC+ + R +HS + K G D ++ +L+ Y + G I + Q+
Sbjct: 242 PDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQI 301
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD ++V WN +L AY ++ +F M V+P+ T+ +L C+H G +
Sbjct: 302 FDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEI 361
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G ++ HS+ +G + ++D+ + G + +A++++ +M E D V W+ ++
Sbjct: 362 GLGEQI-HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRIL-DMIEEKDVVSWTSMIA 419
Query: 391 SCRKH 395
+H
Sbjct: 420 GYVQH 424
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 202/429 (47%), Gaps = 28/429 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
+ FV N LI++Y + A +F +M + V++ LISG+AQ G+ + +F +
Sbjct: 177 ETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQ 236
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-AD 154
L P+ ++AS+L +C D GK +H+ LK + + +L+++Y KS +
Sbjct: 237 LSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIE 296
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA ++F++ + NV+ WN M+ A+ A++ ++F +M G+ P
Sbjct: 297 EALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRM-------------LAAGVRP 343
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T+ +L+ C +HSL K GF+ D ++ LI Y++ G + ++++
Sbjct: 344 NKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRIL 403
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D + D+VSW S++ Y H KEAL+ F M + PD+ S +SAC+ V
Sbjct: 404 DMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVH 463
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G+++ H+ + G + + +V L R G EA E + + W+ L+
Sbjct: 464 QGSQI-HARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSF-EAIEHKEGITWNGLISG 521
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
+ G A K+ Q ++ F +S+I S S N A + + + +RV K
Sbjct: 522 FAQSGLYEEALKVFMKMDQAGAKYNV-FTFVSSI---SASANLADIKQGKQIHARVIKTG 577
Query: 452 GLSWIEIEN 460
S EI N
Sbjct: 578 YTSETEISN 586
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 157/332 (47%), Gaps = 25/332 (7%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVLISCDYLHGKL-- 124
M R S+ ++G+ + E+ LF + QY A L +C +
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 125 ---VHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRA 180
+HA A+ L + + N LI++Y+K A +VFE + R+ +SW ++++ +
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGY-- 118
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ EEA+ L+R++ R G+ P S +L AC + +H
Sbjct: 119 -----------AQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHV 167
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K GF +T + NALI Y RC S L+ +VF M Y D V++N+++ +A G
Sbjct: 168 QVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDR 227
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL +F M + PDS T SLL+ACS G +++G K HS L G+ ++
Sbjct: 228 ALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKG-KQLHSYLLKAGMSLDYIMEGSLL 286
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
DL + G I EA ++ + + V+W+++L
Sbjct: 287 DLYVKSGDIEEALQIF-DSGDRTNVVLWNLML 317
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/564 (39%), Positives = 329/564 (58%), Gaps = 39/564 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D F+ + L+ Y K GY +DA LFD+MP +++VSW +LISG+++ C + SL
Sbjct: 72 RDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR------CLHM--SL 123
Query: 100 LQYFF--------PNEFSLASVLISCDYL--HGKLVHALALKFSLDAHVYVANALINMYS 149
++ PNE ++ S++ +C+ GK +H +K V VAN+LINMY
Sbjct: 124 TAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGFGIKVGGTLEVKVANSLINMYG 183
Query: 150 KSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
KS A ++FE + N +SWNS+IAA + I+ F KM+
Sbjct: 184 KSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR------------- 230
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R G+ D T +L+AC L + A ++H L+ GF IA AL+ YA+ G +S
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
S VF ++ + D V+W ++L YA HG +EA++LF +M ++PD TF LLSACS
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H+GLV EG F+ M E +G+ P++DHY+CMVDLLGR G + +A ++I+ MPMEP++ +W
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG+CR HG L + A L +EP D ++ +SN+Y S S+ A +R +K
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKER 470
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
+++ PG S IE N+ H F G + HP+ E I+ KLEEL+G+++ GY +T L D+
Sbjct: 471 GLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDV 530
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
EEE KE+ + HSEKLA+ F ++ + +E + I KN+RIC DCH+ KL S + +
Sbjct: 531 EEEVKEDMINKHSEKLAIAFGLL----VSKEGEALIITKNLRICGDCHSTAKLISLIEKR 586
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
I++RD RFHHF D CSC DYW
Sbjct: 587 TIIIRDPKRFHHFSDGFCSCADYW 610
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 27/308 (8%)
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------ 198
+C + +VF+++ +R+ + ++ + A++LF M +++
Sbjct: 57 NCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFS 116
Query: 199 ----EALFLFRQLQRE-GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+L F ++ E + P+ T ++ AC G + +H K G + +
Sbjct: 117 RCLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDA--GKYIHGFGIKVGGTLEVKV 174
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
AN+LI+ Y + G ++ + ++F+ + + VSWNSI+ A +G A+E + F+ M +
Sbjct: 175 ANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+ D T ++LL AC H G+ + + H ++ G ++ ++D ++GR+ +
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESI-HGLMFCTGFGAKITIATALLDTYAKLGRLSASY 293
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETR--LAELAATKLKQLEPGDSLGFVQMSNIYCL 428
+ E+ D V W+ +L HG R + + K LEP D + F + +
Sbjct: 294 GVFTEVGF-ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEP-DHVTFTHLLSACSH 351
Query: 429 SGSFNKAR 436
SG N+ +
Sbjct: 352 SGLVNEGK 359
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 13/195 (6%)
Query: 221 IVLKACAGLVT--ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
I + +C + E HA SL+ + GF I + L+ Y + G + ++FD M
Sbjct: 47 IAVNSCPSISNCREIHARVFKSLLYRDGF-----IGDQLVTCYNKLGYAEDALKLFDDMP 101
Query: 279 YHDLVSWNSILKAYA--LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKV 336
+ DLVSWNS++ ++ LH + M+V+P+ T +S++SAC+ A + K
Sbjct: 102 HKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGA---LDAGKY 158
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H G ++ ++++ G+ G + A +L +P +P++V W+ ++ + +G
Sbjct: 159 IHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAAQVTNG 217
Query: 397 ETRLAELAATKLKQL 411
R K+++L
Sbjct: 218 CAREGIDYFNKMRRL 232
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA---RH 63
++ L AC +HGNI+ ++ EH+IN P +P++ + L NMY+ DA R
Sbjct: 409 VWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIM---LSNMYSASRSWKDAAKVRA 465
Query: 64 LFDEMPKRNVVSWTALISGYAQH 86
L E + ++++ G H
Sbjct: 466 LLKERGLKRTPGYSSIEYGNKNH 488
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/591 (40%), Positives = 335/591 (56%), Gaps = 32/591 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHM----INNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
L C HG + +H H+ LFV+N L++MYAKFG LDDA LF
Sbjct: 72 LIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFG 131
Query: 67 EMPKRNVVSWTALISGYAQ-HGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHGKL 124
MP+RNVVSWT +++ A G +E R + + N ++ +SVL +C G L
Sbjct: 132 GMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGT-PGVL 190
Query: 125 --VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HA +K LD+ V+V ++LI+ Y K D VF+ M +++ WNS+IA F
Sbjct: 191 AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQS 250
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ELF +MK E+ FL Q T + VL+AC G+V VH+
Sbjct: 251 GDGVGAMELFMRMK---ESGFLANQ----------GTLTSVLRACTGMVMLEVGRQVHAH 297
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ KY + D ++ NAL+ Y +CG + + +F +M D++SW++++ A +G++ EA
Sbjct: 298 VLKY--DRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEA 355
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L++F M + P++ T V +L ACSHAGLV++G F SM + G+ P+ +H CMVD
Sbjct: 356 LKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVD 415
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G++ EA K I EM EPDSVIW LLG+CR H LA AAT++ +LEP D
Sbjct: 416 LLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLEPEDQGA 475
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+ +SNIY ++ A K M+ V+K PG SWIE+ VH F +G HP + I
Sbjct: 476 RILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRI 535
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
++L LI + K +GYVP+T L D+ E KE+ L +HSEKLA+ F MN E
Sbjct: 536 VQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNS----MEGK 591
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RIMKN+RIC DCH F KL S GK I++RD RFHHF+ +CSC DYW
Sbjct: 592 PVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/564 (39%), Positives = 328/564 (58%), Gaps = 39/564 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D F+ + L+ Y K GY +DA LFD+MP +++VSW +LISG+++ C + SL
Sbjct: 72 RDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR------CLHM--SL 123
Query: 100 LQYFF--------PNEFSLASVLISCDYL--HGKLVHALALKFSLDAHVYVANALINMYS 149
++ PNE ++ S++ +C GK +H +K V VAN+LINMY
Sbjct: 124 TAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGFGIKVGGTLEVKVANSLINMYG 183
Query: 150 KSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
KS A ++FE + N +SWNS+IAA + I+ F KM+
Sbjct: 184 KSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR------------- 230
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R G+ D T +L+AC L + A ++H L+ GF IA AL+ YA+ G +S
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
S VF ++ + D V+W ++L YA HG +EA++LF +M ++PD TF LLSACS
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H+GLV EG F+ M E +G+ P++DHY+CMVDLLGR G + +A ++I+ MPMEP++ +W
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG+CR HG L + A L +EP D ++ +SN+Y S S+ A +R +K
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKER 470
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
+++ PG S IE N+ H F G + HP+ E I+ KLEEL+G+++ GY +T L D+
Sbjct: 471 GLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDV 530
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
EEE KE+ + HSEKLA+ F ++ + +E + I KN+RIC DCH+ KL S + +
Sbjct: 531 EEEVKEDMINKHSEKLAIAFGLL----VSKEGEALIITKNLRICGDCHSTAKLISLIEKR 586
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
I++RD RFHHF D CSC DYW
Sbjct: 587 TIIIRDPKRFHHFSDGFCSCADYW 610
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 141/308 (45%), Gaps = 27/308 (8%)
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------ 198
+C + +VF+++ +R+ + ++ + A++LF M +++
Sbjct: 57 NCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFS 116
Query: 199 ----EALFLFRQLQRE-GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+L F ++ E + P+ T ++ AC+G + +H K G + +
Sbjct: 117 RCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDA--GKYIHGFGIKVGGTLEVKV 174
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
AN+LI+ Y + G ++ + ++F+ + + VSWNSI+ A +G A+E + F+ M +
Sbjct: 175 ANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+ D T ++LL AC H G+ + + H ++ G ++ ++D ++GR+ +
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESI-HGLMFCTGFGAKITIATALLDTYAKLGRLSASY 293
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETR--LAELAATKLKQLEPGDSLGFVQMSNIYCL 428
+ E+ D V W+ +L HG R + + K LEP D + F + +
Sbjct: 294 GVFTEVGF-ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEP-DHVTFTHLLSACSH 351
Query: 429 SGSFNKAR 436
SG N+ +
Sbjct: 352 SGLVNEGK 359
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 221 IVLKACAGLVT--ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
I + +C + E HA SL+ + GF I + L+ Y + G + ++FD M
Sbjct: 47 IAVNSCPSISNCREIHARVFKSLLYRDGF-----IGDQLVTCYNKLGYAEDALKLFDDMP 101
Query: 279 YHDLVSWNSILKAYA--LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKV 336
+ DLVSWNS++ ++ LH + M+V+P+ T +S++SACS A + K
Sbjct: 102 HKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGA---LDAGKY 158
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H G ++ ++++ G+ G + A +L +P +P++V W+ ++ + +G
Sbjct: 159 IHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAAQVTNG 217
Query: 397 ETR 399
R
Sbjct: 218 CAR 220
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA---RH 63
++ L AC +HGNI+ ++ EH+IN P +P++ + L NMY+ DA R
Sbjct: 409 VWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIM---LSNMYSASRSWKDAAKVRA 465
Query: 64 LFDEMPKRNVVSWTALISGYAQH 86
L E + ++++ G H
Sbjct: 466 LLKERGLKRTPGYSSIEYGNKNH 488
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/592 (38%), Positives = 347/592 (58%), Gaps = 30/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFD 66
+ + CA +G + +A H + E Q D+ ++N LIN Y+K G+++ AR +FD
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRM---ELQGDVTLSNVLINAYSKCGFVELARQVFD 122
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVL----ISCDYLH 121
M +R++VSW +I Y ++ E +F + F +EF+++SVL +CD L
Sbjct: 123 GMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALE 182
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
K +H L++K SLD ++YV AL+++Y+K ++A +VFE+M+ ++ ++W+SM+A +
Sbjct: 183 CKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGY-- 240
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ KN EEAL L+R+ QR + + T S V+ AC+ L +H+
Sbjct: 241 -----------VQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 289
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+I K GF + +A++ + YA+CGS+ S +F ++ ++ WN+I+ +A H + KE
Sbjct: 290 VIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKE 349
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
+ LF M + P+ TF SLLS C H GLV+EG + F M +G+ P + HY+CMV
Sbjct: 350 VMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMV 409
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR G + EA +LI+ +P EP + IW LL SCR LAE+AA KL +LEP ++
Sbjct: 410 DILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAG 469
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V +SNIY + + + RK ++ V+K G SWI+I+++VH F G HP+
Sbjct: 470 NHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIRE 529
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I L+ L+ +L+ GY P LHD+E KEE L HSEKLALVF +M E
Sbjct: 530 ICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLM----CLPEG 585
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S +RIMKN+RICVDCH FMK AS + I+VRD+NRFHHF D CSC ++W
Sbjct: 586 STVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/589 (37%), Positives = 335/589 (56%), Gaps = 63/589 (10%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYF 103
N +I+ + + G +D A+ F++M +R+VVSW A+ISGY QHG E +F +L
Sbjct: 215 NTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSS 274
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE---- 155
P++F+LAS L +C L GK +HA ++ D V NALI+MYSKS E
Sbjct: 275 KPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQK 334
Query: 156 ------------------------------AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A ++F+++ R+V++W +MI +
Sbjct: 335 IIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQ 394
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
A+ELF R + +EG P+ T + +L + L + H +H+ +
Sbjct: 395 DAMELF-------------RSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRS 441
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKAYALHGQAKEALQL 304
G ++NALI YA+ GSI+ ++ VF+ + + D ++W S++ A A HG +EAL L
Sbjct: 442 GNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTL 501
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M ++PD T+V +LSAC+H GLV++G ++ M H ++P HYACM+DL G
Sbjct: 502 FERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFG 561
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G + EA I MP+EPD + W LL SC+ H LAE+AA +L +EP +S +
Sbjct: 562 RAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSA 621
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
++N+Y G + A IRK MK V+K G SW++I+N+VH F HPQR+AI++
Sbjct: 622 LANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEM 681
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR-ERSVI 540
+ ++ ++K MG+VP+T LHD+EEE KE+ L HHSEKLA+ F G +C E + +
Sbjct: 682 MAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAF-----GLICTPENTTL 736
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RIMKN+R+C DCH+ +K S L+G+EI+VRD+ RFHHFK+ +CSC DYW
Sbjct: 737 RIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 221/503 (43%), Gaps = 108/503 (21%)
Query: 1 FLHSTQIYATLFHACALHGNI-KQAMQLHEHMINNFPN------------------EPQD 41
FL + + F ++H I K + L ++NN N +
Sbjct: 19 FLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKS 78
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL- 100
+F N +++ YAK G L++A +F+EMP+ + VSWTA+I GY Q G E +F ++
Sbjct: 79 VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138
Query: 101 QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC---- 152
P +F+L +VL SC + G+ VH+ +K L +++ VAN+L+NMY+KS
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198
Query: 153 -----------ADEAWKV-----------------FENMEFRNVISWNSMIAAFRACKLE 184
+ +W FE M R+V+SWN+MI+ + +
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFD 258
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+A+++F+KM L PD T + L ACA L + +H+ I +
Sbjct: 259 REALDIFSKM------------LMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIR 306
Query: 245 YGFEDDTVIANALIHAYARCGSISL---------------------------------SK 271
F+ + NALI Y++ G + + ++
Sbjct: 307 TEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPAR 366
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
++FD + D+V+W +++ Y +G ++A++LF +M +P++ T ++LS S
Sbjct: 367 RIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLA 426
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+ G ++ H+ G + ++ + + G I +A + + + D++ W+ +
Sbjct: 427 SLDHGRQI-HASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSM 485
Query: 389 LGSCRKHGETRLAELAATKLKQL 411
+ + +HG L E A T +++
Sbjct: 486 IIALAQHG---LGEEALTLFERM 505
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/614 (37%), Positives = 343/614 (55%), Gaps = 47/614 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + ACA +++ QLH +I N P D +V + L+ +YAK G +A+ +
Sbjct: 270 STTYTSSLTACARLSSLRWGKQLHAQVIRNLP--CIDPYVASALVELYAKCGCFKEAKGV 327
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DY 119
F+ + RN V+WT LI+G+ QHG E LF + ++F+LA+++ C D
Sbjct: 328 FNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
G+ +H+L LK V V+N+LI+MY+K C + A +F M ++++SW SMI A
Sbjct: 388 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAK-CDNLQSAESIFRFMNEKDIVSWTSMITA 446
Query: 178 FRACKLEAQAIELFAKMKN------------------EEEALFLFR-QLQREGMAPDWCT 218
A+A E F M EE+ L ++ L + + PDW T
Sbjct: 447 HSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVT 506
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+ + K CA L + + K G DT +ANA+I Y++CG I +++VFD +
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLN 566
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSWN+++ Y+ HG K+A+++F ++ +PD ++V++LS CSH+GLVQEG
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKS 626
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F M H + P L+H++CMVDLLGR G + EA+ LI EMPM+P + +W LL +C+ H
Sbjct: 627 YFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIH 686
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
G LAELAA + +L+ DS ++ M+ IY +G + + IRK M+ ++K PG SW
Sbjct: 687 GNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSW 746
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
+E+ N+VH F + HPQ AI KKL+EL+ ++ +GYV S
Sbjct: 747 MEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVRTDS-----------PRSEI 795
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HHSEKLA+ F +M+ + I IMKN+RIC DCH +KL S + G+E V+RD+ RF
Sbjct: 796 HHSEKLAVAFGLMSLPAWMP----IHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRF 851
Query: 576 HHFKDRICSCNDYW 589
HHF CSC DYW
Sbjct: 852 HHFNGGSCSCGDYW 865
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 182/409 (44%), Gaps = 37/409 (9%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL HA G + A +L I + PN + N ++N Y K G L DA LF MP
Sbjct: 44 TLLHAYLSCGALPDARRLLLTDIAH-PN----VITHNVMLNGYVKLGRLSDAVELFGRMP 98
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYLHGKLVHA 127
R+V SW L+SGY Q F S+ + PN F+ A + SC L G+ A
Sbjct: 99 ARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGAL-GERSLA 157
Query: 128 LAL-----KFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
L L KF VA AL++M+ + D A ++F ++ + NSM+ +
Sbjct: 158 LQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKT 217
Query: 182 KLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVL 223
A+ELF M + EAL + +Q +G+ D T++ L
Sbjct: 218 YGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSL 277
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
ACA L + R +H+ + + D +A+AL+ YA+CG +K VF+ + + V
Sbjct: 278 TACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNV 337
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+W ++ + HG E+++LF+ M + D +L+S C + G ++ HS+
Sbjct: 338 AWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL-HSL 396
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
G + + ++ + + + AE + R M E D V W+ ++
Sbjct: 397 CLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMN-EKDIVSWTSMI 444
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 110/294 (37%), Gaps = 43/294 (14%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS------------ 266
F+ L++C A A+H + G + N L+HAY CG+
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66
Query: 267 --------------------ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
+S + ++F +M D+ SWN+++ Y Q +L+ F
Sbjct: 67 AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126
Query: 307 NM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+M + P++ TF + +C G ++ M++ G D A +VD+ R
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLL-GMVQKFGSQDDSDVAAALVDMFVR 185
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G + A +L + S+L+G + +G EL + D + + M
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALEL----FDSMPERDVVSWNMM 241
Query: 423 SNIYCLSGSFNKA--RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ SG +A ++ + KG R+ S + R+ G + H Q
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQ 295
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/594 (37%), Positives = 337/594 (56%), Gaps = 61/594 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +I ++ + G +D A F++M +R++V+W ++ISGY Q G +F +
Sbjct: 210 KDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKM 269
Query: 100 LQ--YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L+ P+ F+LASVL +C L G+ +H+ + D V NALI+MYS+
Sbjct: 270 LRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 154 ----------------------------------DEAWKVFENMEFRNVISWNSMIAAFR 179
+EA +F++++ R+V++W +MI +
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYE 389
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L +AI LF M EE QR P+ T + +L + L + H +H
Sbjct: 390 QHGLYGEAINLFRSMVGEE---------QR----PNSYTLAAMLSVASSLASLGHGKQIH 436
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALHGQA 298
K G ++NALI YA+ GSI+ + + FD + D VSW S++ A A HG A
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL+LF M ++PD T+V + SAC+HAGLV +G + F M + ++P L HYAC
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDL GR G + EA++ I +MP+EPD V W LL +CR + L ++AA +L LEP +
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPEN 616
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S + ++N+Y G + +A IRK MK RV+K G SWIE++++VH F HPQ+
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQK 676
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
I+ ++++ ++K MGYVP+T+ LHD+EEE KE+ L HHSEKLA+ F +++
Sbjct: 677 NEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLIS----TP 732
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+++ +RIMKN+R+C DCH +K S L+G+EI+VRD+ RFHHFKD CSC DYW
Sbjct: 733 DKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 210/457 (45%), Gaps = 65/457 (14%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
F N +++ YAK G +D + FD +P+R+ VSWT +I GY G + R+ +++
Sbjct: 81 FSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMRE 140
Query: 103 FF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE-- 155
P++F+L +VL S GK VH+ +K L +V V+N+L+NMY+K C D
Sbjct: 141 GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK-CGDPMM 199
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE----------------- 198
A VF+ M +++ SWN+MIA A+ F +M +
Sbjct: 200 AKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYD 259
Query: 199 -EALFLFRQLQREGM-APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
AL +F ++ R+ M +PD T + VL ACA L +HS I GF+ ++ NA
Sbjct: 260 LRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNA 319
Query: 257 LIHAYARCGSISL---------------------------------SKQVFDKMTYHDLV 283
LI Y+RCG + +K +FD + D+V
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVV 379
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+W +++ Y HG EA+ LF +M +P+S T ++LS S + G ++ S
Sbjct: 380 AWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSA 439
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
+++ G + + ++ + + G I A + + E D+V W+ ++ + +HG
Sbjct: 440 VKS-GEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE 498
Query: 401 A-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
A EL T L + D + +V + + +G N+ R
Sbjct: 499 ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 171/387 (44%), Gaps = 44/387 (11%)
Query: 105 PNEFSLASVLISCDYL------------HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
P SL+++L C L +LVH +K L VY+ N L+N+YSK+
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 153 -ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------- 198
A A K+F+ M R SWN++++A+ + E F ++ +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123
Query: 199 -----EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+A+ + ++ REG+ P T + VL + A VHS I K G + +
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
+N+L++ YA+CG ++K VFD+M D+ SWN+++ + GQ A+ F M + D
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQM-AERD 242
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL- 372
T+ S++S + G +F ML + + P A ++ + ++ E++
Sbjct: 243 IVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIH 302
Query: 373 --IREMPMEPDSVIWSVLLGSCRKHG--ET--RLAELAATKLKQLEPGDSLGFVQMSNIY 426
I + ++ + L+ + G ET RL E TK ++E GF + + Y
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE-----GFTALLDGY 357
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGL 453
G N+A+ I +K V + +
Sbjct: 358 IKLGDMNEAKNIFDSLKDRDVVAWTAM 384
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 213 APDWCTFSIVLKACAGLVTER--------HASAVHSLIAKYGFEDDTVIANALIHAYARC 264
AP + S +L+ C L+ + A VH + K G + N L++ Y++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSAC 324
G ++++FD+M SWN++L AYA G + + F + Q DS ++ +++
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLP-QRDSVSWTTMIVGY 121
Query: 325 SHAGLVQEGNKVFHSMLENHGVVP 348
+ G + ++ M+ G+ P
Sbjct: 122 KNIGQYHKAIRIMGEMMR-EGIEP 144
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/555 (38%), Positives = 327/555 (58%), Gaps = 27/555 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
++ L +MY+K G ++ AR +FD M ++ VVSW +++ GY Q+G E+ +F +L+
Sbjct: 285 ISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEG 344
Query: 104 F-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
P ++ L +C D GK VH + +L + + V N+LI+MYSK D A
Sbjct: 345 IDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIAS 404
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F N+ R +SWN+MI + A+ EAL F +++ GM PD
Sbjct: 405 DIFNNLNGRTHVSWNAMILGY-------------AQNGRVSEALNCFSEMKSLGMKPDSF 451
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T V+ A A L RHA +H LI + + + + AL+ Y++CG+I +++++FD +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
+ +++WN+++ Y HG + AL LF M V+P+ T++S++SACSH+GLV EG
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM +++G+ P +DHY MVDLLGR GRI EA I MP+ P ++ +LG+C+
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKI 631
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H + E AA KL +L P + V ++NIY + ++K +RK M+ ++K PG S
Sbjct: 632 HKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCS 691
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
+E+ N VH F SG HPQ + I+ LEEL+ ++K GYVP+T+L L D+E++ +E+ L
Sbjct: 692 VVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLL 750
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ F ++N + I + KN+R+C DCHN K S + G+EI+VRD R
Sbjct: 751 NSHSEKLAIAFGLLNTSP----GTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQR 806
Query: 575 FHHFKDRICSCNDYW 589
FHHFK+ ICSC DYW
Sbjct: 807 FHHFKNGICSCGDYW 821
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 163/335 (48%), Gaps = 26/335 (7%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-L 100
LF T L+++++K+G +++A +F+ + + + ++ GYA++ + E C +
Sbjct: 82 LFQTK-LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRY 140
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--AD 154
P ++ +L C D GK +H + S A+V+ ++NMY+K C D
Sbjct: 141 DDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAK-CRQID 199
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A+K+F+ M R+++SWN++IA F +A+EL +M Q EG P
Sbjct: 200 DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRM-------------QDEGQRP 246
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T VL A A + ++H + GF I+ AL Y++CGS+ ++ +F
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIF 306
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M +VSWNS++ Y +G+ ++A+ +F M + P T + L AC+ G ++
Sbjct: 307 DGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLE 366
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
G K H ++ + + ++ + + R+
Sbjct: 367 RG-KFVHKFVDQLNLGSDISVMNSLISMYSKCKRV 400
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 154/341 (45%), Gaps = 59/341 (17%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
HACA G++++ +H+ + + N D+ V N LI+MY+K +D A +F+ + R
Sbjct: 356 LHACADLGDLERGKFVHKFV--DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HGKLVH 126
VSW A+I GYAQ+G E F + P+ F++ SV+ + L H K +H
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
L ++ LD +++V AL++MYSK A A K+F+ + R+VI+WN+MI + L
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE--RHASAVHSL 241
A++LF KMK + + P+ T+ V+ AC +GLV E RH S+
Sbjct: 534 AALDLFDKMK-------------KGAVEPNDITYLSVISACSHSGLVDEGLRH---FKSM 577
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
YG E A++ R G I KEA
Sbjct: 578 KQDYGLEPSMDHYGAMVDLLGRAGRI-------------------------------KEA 606
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
NM + P + ++L AC ++ G K + E
Sbjct: 607 WDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFE 647
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 95/207 (45%), Gaps = 9/207 (4%)
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+++L+ C + + + L+ K G ++ + L+ +++ GSI+ + +VF+ +
Sbjct: 53 AVLLELCTSM---KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
++++LK YA + + AL M +V+P F LL C ++ G ++
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H L + + +V++ + +I +A K+ MP E D V W+ ++ ++G
Sbjct: 170 -HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAGFSQNG 227
Query: 397 ETRLA-ELAATKLKQLEPGDSLGFVQM 422
+ A EL + + DS+ V +
Sbjct: 228 FAKKALELVLRMQDEGQRPDSITLVTV 254
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 327/558 (58%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D V N L+ MY K G + D +F+ R+++SW AL+SG+ + + R+F +L
Sbjct: 465 DNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQML 524
Query: 101 -QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKS-CAD 154
+ F PN ++ S+L SC L GK VHA +K SLD + +V AL++MY+K+ +
Sbjct: 525 AEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLE 584
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A +F + R++ +W ++A + A+ E+A+ F Q+QREG+ P
Sbjct: 585 DAETIFNRLIKRDLFAWTVIVAGY-------------AQDGQGEKAVKCFIQMQREGVKP 631
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T + L C+ + T +HS+ K G D +A+AL+ YA+CG + ++ VF
Sbjct: 632 NEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 691
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D + D VSWN+I+ Y+ HGQ +AL+ F M PD TF+ +LSACSH GL++
Sbjct: 692 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE 751
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG K F+S+ + +G+ P ++HYACMVD+LGR G+ E E I EM + + +IW +LG+
Sbjct: 752 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 811
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ HG E AA KL +LEP ++ +SN++ G ++ +R M V+K P
Sbjct: 812 CKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEP 871
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+E+ +VH F S HP+ I KL++L +L +GY P T LH++ + K+
Sbjct: 872 GCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQ 931
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E L++HSE+LAL FA+++ + R IRI KN+RIC DCH+FMK S++ +E+VVRD
Sbjct: 932 ELLFYHSERLALAFALLSTST----RKTIRIFKNLRICGDCHDFMKSISEITNQELVVRD 987
Query: 572 SNRFHHFKDRICSCNDYW 589
N FHHFK+ CSC ++W
Sbjct: 988 INCFHHFKNGSCSCQNFW 1005
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 212/407 (52%), Gaps = 34/407 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YAT AC++ +++ Q+H I + DLFV + L+++YAK G + A +F
Sbjct: 232 YATALKACSMCLDLEFGKQVHAEAIK--VGDFSDLFVGSALVDLYAKCGEMVLAERVFLC 289
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHG 122
MPK+N VSW AL++G+AQ G+AE+ LFC + ++F+L++VL C + G
Sbjct: 290 MPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG 349
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
++VH+LA++ + +++ L++MYSK A +A KVF +E +V+SW+++I
Sbjct: 350 QIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQK 409
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+A E+F +M++ G+ P+ T + ++ A L + ++H+
Sbjct: 410 GQSREAAEVFKRMRHS-------------GVIPNQFTLASLVSAATDLGDLYYGESIHAC 456
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ KYGFE D + NAL+ Y + GS+ +VF+ T DL+SWN++L + +
Sbjct: 457 VCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTG 516
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY----A 354
L++F+ M P+ TF+S+L +CS V G +V +++N LD
Sbjct: 517 LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN-----SLDGNDFVGT 571
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+VD+ + R LE + I ++ D W+V++ + G+ A
Sbjct: 572 ALVDMYAK-NRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKA 617
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 203/394 (51%), Gaps = 32/394 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ + CA G++ + +H +I + N L+ N L+N+YAK G + A +F E
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLW--NSLVNVYAKCGSANYACKVFGE 188
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHG 122
+P+R+VVSWTALI+G+ G LFC + + NEF+ A+ L +C D G
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFG 248
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAAFRA 180
K VHA A+K + ++V +AL+++Y+K C + A +VF M +N +SWN+++
Sbjct: 249 KQVHAEAIKVGDFSDLFVGSALVDLYAK-CGEMVLAERVFLCMPKQNAVSWNALLNG--- 304
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
FA+M + E+ L LF ++ + T S VLK CA R VHS
Sbjct: 305 ----------FAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHS 354
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L + G E D I+ L+ Y++CG + +VF ++ D+VSW++I+ GQ++E
Sbjct: 355 LAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSRE 414
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-- 355
A ++F M V P+ T SL+SA + G + G + H+ + +G + D+ C
Sbjct: 415 AAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI-HACVCKYGF--EYDNTVCNA 471
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+V + ++G + + ++ E D + W+ LL
Sbjct: 472 LVTMYMKIGSVQDGCRVF-EATTNRDLISWNALL 504
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 151/290 (52%), Gaps = 23/290 (7%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
D GK +H +K ++ ++ N+L+N+Y+K A+ A KVF + R+V+SW ++I
Sbjct: 143 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 202
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F A + A+ LF +M+ REG+ + T++ LKAC+ +
Sbjct: 203 GFVAEGYGSGAVNLFCEMR-------------REGVEANEFTYATALKACSMCLDLEFGK 249
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH+ K G D + +AL+ YA+CG + L+++VF M + VSWN++L +A G
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 297 QAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
A++ L LF M + T ++L C+++G ++ G ++ HS+ G +LD +
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG-QIVHSLAIRIGC--ELDEF 366
Query: 354 --ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
C+VD+ + G +A K+ + +PD V WS ++ + G++R A
Sbjct: 367 ISCCLVDMYSKCGLAGDALKVFVRIE-DPDVVSWSAIITCLDQKGQSREA 415
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+S +L+ CA A+H + K G D+ + N+L++ YA+CGS + + +VF ++
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSW +++ + G A+ LF M V+ + T+ + L ACS ++ G +
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
V H+ G L + +VDL + G ++ AE++ MP + ++V W+ LL +
Sbjct: 251 V-HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQ-NAVSWNALLNGFAQM 308
Query: 396 GE 397
G+
Sbjct: 309 GD 310
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/593 (39%), Positives = 334/593 (56%), Gaps = 34/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +LF +C N + Q+H H F + D + N L+NMY+ G L AR +FD
Sbjct: 91 FPSLFKSCR---NSSEGKQIHCHSTKLGFAS---DTYAQNTLMNMYSNCGCLVSARKVFD 144
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYL 120
+M + VVSW +I +AQ E RLF ++ + PNE +L +VL +C D
Sbjct: 145 KMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLA 204
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
K +H + HV + L+++Y K C A +F+ + +N+ SWN MI
Sbjct: 205 MVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGH- 263
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ N EEAL LFR++Q +G+ D T + +L AC L +H
Sbjct: 264 ------------VEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLH 311
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ I K + D + AL+ YA+CGSI + QVF +M D+++W +++ A+ GQA+
Sbjct: 312 AYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAE 371
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
ALQ F M V+PD+ TFV +L+ACSHAG V EG F+SM + +G+ P ++HY +
Sbjct: 372 NALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGL 431
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VD+LGR GRI EAE+LI+ MPM PD + LLG+CR HG AE AA +L +++P S
Sbjct: 432 VDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHS 491
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SNIY S + +A+ R+ M +RK PG S IE+ VHEF G H Q
Sbjct: 492 GTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSS 551
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I + LE++I +LK GYVP+ S L D+ EE KE +L HSEKLA+ F +++
Sbjct: 552 EINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSV---- 607
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+RIC DCH+ KL S L +EI+VRD NRFHHFKD CSC +W
Sbjct: 608 GTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
+EAL ++++ +G+ PD TF + K+C +H K GF DT N L
Sbjct: 70 QEALLFYQEMMVQGLIPDRYTFPSLFKSCR---NSSEGKQIHCHSTKLGFASDTYAQNTL 126
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPD 313
++ Y+ CG + +++VFDKM +VSW +++ +A Q EA++LF M NV+P+
Sbjct: 127 MNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPN 186
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T V++L+AC+ A + ++ H ++ HG + ++D+ + G + A L
Sbjct: 187 EVTLVNVLTACARARDLAMVKRI-HEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLF 245
Query: 374 REMPMEPDSVIWSVLL 389
+ E + W++++
Sbjct: 246 -DKAQEKNLFSWNIMI 260
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 238 VHSLIAKYGFEDDTVIANALIH--AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H+ + + G D A+ ++ + GS+ ++ VF ++ + NSI++
Sbjct: 7 IHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDK 66
Query: 296 GQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
+EAL + M VQ PD TF SL +C ++ EG ++ H G
Sbjct: 67 NLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNS---SEGKQI-HCHSTKLGFASDTYA 122
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++++ G ++ A K+ +M + V W+ ++G
Sbjct: 123 QNTLMNMYSNCGCLVSARKVFDKME-DKTVVSWATMIG 159
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/590 (36%), Positives = 324/590 (54%), Gaps = 27/590 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA+L +C IK QLH + D + L+N+Y L AR LFD
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVC--LAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HG 122
+PK N+ W LI GYA +G E +L+ + Y P+ F+ VL +C L HG
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H ++ + V+V ALI+MY+K C A +VF+ + R+ + WNSM+AA+
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAY--- 252
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ + + L L ++ G+ P T + A A +H L
Sbjct: 253 ----------SQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGL 302
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ FE + AL+ YA+CGS+ +++ +F+++ +VSWN+++ YA+HG A EA
Sbjct: 303 SWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEA 362
Query: 302 LQLFSNMN--VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
L LF MN +PD TFV +LSACSH GL++EG F +M+ ++ + P + HY CMVDL
Sbjct: 363 LDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDL 422
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LG GR+ EA LI +M + PDS +W LL SC+ H L E+A +L +LEP D+ +
Sbjct: 423 LGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNY 482
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V +SNIY +G + +RK M R++K SWIE++N+VH F SG HP + I+
Sbjct: 483 VILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIY 542
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+LE + G +K GY P T HD+E++ K + HSE+LA+ F +++ R
Sbjct: 543 SELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTR---- 598
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I KN+RIC DCH +K S + +EI VRD NR+HHFKD +CSC DYW
Sbjct: 599 LLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 125/249 (50%), Gaps = 20/249 (8%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P + ++ +L++C + +H+ + GF DTVIA L++ Y C S+S ++
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+FD++ H++ WN +++ YA +G + A+QL+ M + PD+ TF +L AC+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
++ G ++ H + G + A ++D+ + G + A ++ ++ + D+V+W+ +
Sbjct: 191 AIEHGREI-HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLWNSM 248
Query: 389 LGSCRKHG--ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
L + ++G + L+ + L L P + + + +S S + A L +
Sbjct: 249 LAAYSQNGHPDACLSLCSEMVLTGLRP------TEATLVTAISASADNAALPQG------ 296
Query: 447 VRKYPGLSW 455
R+ GLSW
Sbjct: 297 -RELHGLSW 304
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/559 (39%), Positives = 334/559 (59%), Gaps = 27/559 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V N +NM+ G L DAR LF++M R+VV+W +I+ Y Q+ N E RLF L
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQ 299
Query: 101 QYFF-PNEFS---LASVLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
Q N+ + + +V S L GK++H L + D VA AL+++Y +
Sbjct: 300 QDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPG 359
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+AWK+F +M ++VI+W M A+ A+ +EAL LF+++Q EG P
Sbjct: 360 QAWKIFVDMGSKDVITWTVMCVAY-------------AQNGFRKEALQLFQEMQLEGRRP 406
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T VL CA L + +HS I + F + V+ ALI+ Y +CG ++ + VF
Sbjct: 407 TSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVF 466
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+KM D++ WNS+L AYA HG E LQLF+ M V+ D+ +FVS+LSA SH+G V
Sbjct: 467 EKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVT 526
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP-MEPDSVIWSVLLG 390
+G + F +ML++ + P + Y C+VDLLGR GRI EA ++ ++ PD ++W LLG
Sbjct: 527 DGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLG 586
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR H +T A+ AA ++ + +P S +V +SN+Y +G ++ +RK M+ V+K
Sbjct: 587 ACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKE 646
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IEI NRVHEF G + HP+R I+ +L+ L +++ GY+P+T + LHD+E+E K
Sbjct: 647 PGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERK 706
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E+ L++HSE+LA+ F +++ + +R++KN+R+C DCH K S L G+EI+VR
Sbjct: 707 EDMLFYHSERLAIAFGLISTPP----GTPLRVIKNLRVCSDCHTATKYISKLRGREILVR 762
Query: 571 DSNRFHHFKDRICSCNDYW 589
D++RFH+FKD CSC DYW
Sbjct: 763 DTHRFHNFKDGRCSCKDYW 781
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 192/402 (47%), Gaps = 26/402 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
T + L C+ N+ ++H H+ + Q+ V HLI MYA+ G + +A+
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDR--GFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH- 121
+F+ + +++V +WT +I Y Q G+ + +F + + P + + ++L +C
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
G +H L+ + V+V ALINMY+K AW F+ +E R+V+SW +MIA
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA- 179
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
AC Q FA A +L+R++Q +G+ P+ T V A
Sbjct: 180 --ACVQHDQ----FAL------ARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKF 227
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
V+ L++ E D + N+ ++ + G + ++++F+ M D+V+WN ++ Y +
Sbjct: 228 VYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNEN 287
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EA++LF + V+ + TFV +L+ + + +G KV H +++ G
Sbjct: 288 FGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDAVVAT 346
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ L GR +A K+ +M D + W+V+ + ++G
Sbjct: 347 ALMSLYGRCEAPGQAWKIFVDMG-SKDVITWTVMCVAYAQNG 387
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 155/329 (47%), Gaps = 22/329 (6%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
HG+ VH + + V LI MY++ EA +VFE +E ++V +W MI
Sbjct: 22 HGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIG--- 78
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
++ + + + AL +F Q+Q E + P T+ +L ACA + + +H
Sbjct: 79 ----------IYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 128
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I + GFE D + ALI+ Y +CGS+ + F ++ + D+VSW +++ A H Q
Sbjct: 129 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 188
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV-PQLDHYAC 355
A L+ M V P+ T ++ +A + EG V+ L + GV+ +
Sbjct: 189 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYG--LVSSGVMESDVRVMNS 246
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PG 414
V++ G G + +A +L +M ++ D V W++++ ++ A +L+Q
Sbjct: 247 AVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKA 305
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ + FV M N+Y S K ++I + +K
Sbjct: 306 NDITFVLMLNVYTSLTSLAKGKVIHELVK 334
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 159/346 (45%), Gaps = 33/346 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D V L+++Y + A +F +M ++V++WT + YAQ+G +E +LF +
Sbjct: 340 RDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM 399
Query: 100 -LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
L+ P +L +VL +C +L G+ +H+ ++ + V ALINMY K C
Sbjct: 400 QLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGK-CGK 458
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
EA VFE M R+++ WNSM+ A +A+ +E L LF Q+Q +G+
Sbjct: 459 MAEAMSVFEKMAKRDILVWNSMLGA-------------YAQHGYYDETLQLFNQMQLDGV 505
Query: 213 APDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
D +F VL A +G VT+ + V +++ + + ++ R G I +
Sbjct: 506 KADAVSFVSVLSALSHSGSVTDGYQYFV-AMLQDFSITPTPELYGCVVDLLGRAGRIQEA 564
Query: 271 KQVFDKMT--YHDLVSWNSILKAYALHG---QAKEALQLFSNMNVQPDSATFVSLLSACS 325
+ K++ D + W ++L A H QAK A + + P + +LS
Sbjct: 565 VDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQV--LERDPSHSGAYVVLSNVY 622
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
A +G ++ + GV + + +++L RV LE ++
Sbjct: 623 AAAGDWDGVNRMRKLMRSRGVKKEPGRSS--IEILNRVHEFLEGDR 666
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD F +L+ C+ H VH + GFE + ++ LI YA+CGS+ ++QV
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F+ + D+ +W ++ Y G AL +F M +V P T+V++L+AC+ +
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++G ++ H + G + ++++ + G + A + + D V W+ ++
Sbjct: 122 KDGMEI-HGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMIA 179
Query: 391 SCRKHGETRLA 401
+C +H + LA
Sbjct: 180 ACVQHDQFALA 190
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
++ + CA +++ Q+H H+I N ++ V LINMY K G + +A
Sbjct: 407 TSATLVAVLDTCAHLAALQKGRQIHSHIIEN--RFRMEMVVETALINMYGKCGKMAEAMS 464
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVL 114
+F++M KR+++ W +++ YAQHG +E +LF + L + S SVL
Sbjct: 465 VFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVL 516
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/632 (36%), Positives = 358/632 (56%), Gaps = 63/632 (9%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L ++ + L +CA ++ Q+H H++ EP DL+V LI+MYA+ G L+D
Sbjct: 62 LLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLK-LGYEP-DLYVHTSLISMYAQNGRLED 119
Query: 61 A-------------------------------RHLFDEMPKRNVVSWTALISGYAQHGNA 89
A + +FDE+P ++VVSW A+ISGYA+ G+
Sbjct: 120 AHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSY 179
Query: 90 EECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANAL 144
+E LF +++ P+E ++ +VL +C G+ VH+ +++ + NAL
Sbjct: 180 KEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNAL 239
Query: 145 INMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFL 203
I++YSK + A +FE + ++V+SWN++I + M +EAL L
Sbjct: 240 IDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGY-------------THMNLYKEALLL 286
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT---VIANALIHA 260
F+++ R G +P+ T +L ACA L +H I K +D T + +LI
Sbjct: 287 FQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKK-LKDVTNAPSLRTSLIDM 345
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
YA+CG I + QVF+ M + L SWN+++ +A+HG+A LFS M ++PD TF
Sbjct: 346 YAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITF 405
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
V LLSACSH+G + G +F SM +++ + P+L+HY CM+DLLG G EA+++I+ MP
Sbjct: 406 VGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMP 465
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
MEPD VIW LL +CR+HG LAE A L ++EP + +V +SNIY +G +++
Sbjct: 466 MEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAK 525
Query: 438 IRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPE 497
+R + G ++K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+
Sbjct: 526 VRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPD 585
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
TS L ++EEE KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH K
Sbjct: 586 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATK 641
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
L S + +EI+ RD RFHHF+D +CSCND+W
Sbjct: 642 LVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 193/414 (46%), Gaps = 36/414 (8%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCD- 118
A +F + + N + W ++ GYA + +L+ ++ PN ++ +L SC
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 119 ---YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
+ G+ +H LK + +YV +LI+MY+++ ++A KVF+ R+V+S+ ++
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 175 IAAFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQREGMAPDW 216
I + + A E+F A+ + +EAL LF+++ + + PD
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T VL ACA + VHS I +GF + I NALI Y++CG + + +F+
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
++ D+VSWN+++ Y KEAL LF M P+ T VS+L AC+H G + G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318
Query: 334 NKV---FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ L++ P L ++D+ + G I A ++ M + W+ ++
Sbjct: 319 RWIHVYIDKKLKDVTNAPSL--RTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIF 375
Query: 391 SCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
HG +++++ +EP D + FV + + SG + R I K M
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEP-DDITFVGLLSACSHSGKLDLGRHIFKSM 428
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/589 (37%), Positives = 325/589 (55%), Gaps = 57/589 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+FV + L++MY K G + DA+ FDEMP+RNVV +I+G + G EE RLFC L
Sbjct: 172 DVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLK 231
Query: 100 -------------------------------LQYFFPNEFSLASVLISCDYL----HGKL 124
L F ++F+ SVL +C L GK
Sbjct: 232 ERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQ 291
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+HA ++ +V+V +AL++MYSK A VF+ M +NVISW +M+ +
Sbjct: 292 IHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGY----- 346
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+ EEA+ +F ++QR G+ PD T V+ +CA L + + H
Sbjct: 347 --------GQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRAL 398
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
G ++NALI Y +CGS S ++F +M D VSW ++L YA G+A E +
Sbjct: 399 VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIG 458
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M ++PD TF+ +LSACS AGLV++G + F SM++ HG++P +DH C++DLL
Sbjct: 459 LFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLL 518
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR GR+ EA I MP PD V W+ LL SCR HG+ + + AA L LEP + +V
Sbjct: 519 GRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYV 578
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+S++Y G ++K +R+ M+ RVRK PG SWI+ + +VH F++ + P I+
Sbjct: 579 LLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYA 638
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
+LE+L ++ GYVP+ S LHD+EE K + L HHSEKLA+ F ++ I
Sbjct: 639 ELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLI----FVPPGLPI 694
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R++KN+R+C DCHN K S + +EI+VRD+ RFH FKD CSC D+W
Sbjct: 695 RVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 220/451 (48%), Gaps = 59/451 (13%)
Query: 4 STQIYATLFHACALHGNIKQAMQLH----------EHMINN------------------F 35
S+ YA+L C N QA +LH E ++N F
Sbjct: 4 SSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVF 63
Query: 36 PNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
+ PQ +LF N ++++Y+K G L + +F+ MP R+ VSW ISGYA +G+ + R
Sbjct: 64 DHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVR 123
Query: 95 LFCSLLQ--YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMY 148
++ +L+ N + +++LI C G+ ++ LKF + V+V + L++MY
Sbjct: 124 VYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMY 183
Query: 149 SK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN----------- 196
+K +A + F+ M RNV+ N+MI C + ++ LF +K
Sbjct: 184 TKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMIT 243
Query: 197 -------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
E EAL +FR+++ G A D TF VL AC L+ +H+ + + +D
Sbjct: 244 GLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKD 303
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ + +AL+ Y++C SI ++ VF +M +++SW ++L Y +G ++EA+++F M
Sbjct: 304 NVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQ 363
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
V+PD T S++S+C++ ++EG + FH G++ + ++ L G+ G
Sbjct: 364 RNGVEPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGST 422
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ +L EM + D V W+ LL + G+
Sbjct: 423 ENSHRLFTEMNIR-DEVSWTALLAGYAQFGK 452
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/614 (37%), Positives = 343/614 (55%), Gaps = 39/614 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA +F +K Q+H HM+ +P L V + ++ YA G +D + +F+
Sbjct: 73 YAPVFQFLTGLNMLKLGHQVHAHMLLR-GLQPTAL-VGSKMVAFYASSGDIDSSVSVFNG 130
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISCDYL----HG 122
+ + + + + ++I YA++G AE + S+ + F + F+ VL S L G
Sbjct: 131 IGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMG 190
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K VH L L+ L +YVA +LI +Y K C + +A KVF+NM R+V SWN+++A +
Sbjct: 191 KCVHGLILRIGLQFDLYVATSLIILYGK-CGEINDAGKVFDNMTIRDVSSWNALLAGYTK 249
Query: 181 CKLEAQAIELFAKM--KN----------------EEEALFLFRQLQRE--GMAPDWCTFS 220
A+ +F +M +N ++AL LF ++ +E G+ P+W T
Sbjct: 250 SGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIM 309
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
VL ACA L T +H L + G + + AL YA+CGS+ ++ FDK+ +
Sbjct: 310 SVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRN 369
Query: 281 D--LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
+ L++WN+++ AYA +G +A+ F M +QPD TF LLS CSH+GLV G K
Sbjct: 370 EKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLK 429
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F+ M + + P+++HYAC+ DLLGR GR+ EA KL+ EMPM IW LL +CRKH
Sbjct: 430 YFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH 489
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
+AE AA KL LEP ++ +V +SN+Y +G + + +R +K +K PG SW
Sbjct: 490 RNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSW 549
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
IEI + H F G HPQ + I+ LE L ++K GY P+TS LHDI EE KE L
Sbjct: 550 IEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLI 609
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HSEKLA+ F I+N + +V+R+ KN+RIC DCH M S++ G+E++VRD NRF
Sbjct: 610 AHSEKLAVAFGILNTPA----ETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRF 665
Query: 576 HHFKDRICSCNDYW 589
HHFK CSC DYW
Sbjct: 666 HHFKGGCCSCGDYW 679
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 19/263 (7%)
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
L + L G P +++ V + GL + VH+ + G + ++ + ++ YA
Sbjct: 58 LLQPLSAPG-PPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYA 116
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
G I S VF+ + + +NS+++AYA +G A+ + + +M D TF
Sbjct: 117 SSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPF 176
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMP 377
+L + V G K H ++ G+ Q D Y ++ L G+ G I +A K+ M
Sbjct: 177 VLKSSVELLSVWMG-KCVHGLILRIGL--QFDLYVATSLIILYGKCGEINDAGKVFDNMT 233
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
+ D W+ LL K G + A +++ + + + M + Y SG +A
Sbjct: 234 IR-DVSSWNALLAGYTKSG---CIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 289
Query: 438 IRKEM--KGSRVRKYPGLSWIEI 458
+ EM + S VR +W+ I
Sbjct: 290 LFDEMVKEDSGVRP----NWVTI 308
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/659 (35%), Positives = 350/659 (53%), Gaps = 91/659 (13%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
C + N++ A L + M +D+ N +++ YA+ GY+ +A+ +FDEMP +
Sbjct: 37 LRGCVRYRNLRAARLLFDQM------PERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK 90
Query: 72 NVVSWTALISGYAQHGNAEECFRLF------------CSLLQYFFPNEFSLA-------- 111
N +SW +++ Y Q+G E+ RLF C + Y N A
Sbjct: 91 NSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMP 150
Query: 112 -------SVLISCDYLHGKLVHALAL-KFSLDAHVYVANALINMYSKSCA-DEAWKVFEN 162
+ +IS +G+L+ A L + S V+ A+++ Y ++ DEA +VF+
Sbjct: 151 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 210
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------------- 197
M +N +SWN++IA + CK QA ELF M +
Sbjct: 211 MPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFF 270
Query: 198 ------------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
EEAL LF +++R+G + TF+ L CA +
Sbjct: 271 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 330
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH + K G E + NAL+ Y +CG+I + VF+ + ++VSWN+++ YA
Sbjct: 331 LGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYA 390
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG KEAL LF +M + PD T V +LSACSH GLV +G + F+SM +++G+
Sbjct: 391 RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANS 450
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
HY CM+DLLGR GR+ +A+ L++ MP EPD+ W LLG+ R HG T L E AA + +
Sbjct: 451 KHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE 510
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
+EP +S +V +SN+Y SG + +R M+ V+K PG SW+E++N++H F G
Sbjct: 511 MEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDS 570
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP+R+ I+ LEEL ++K GYV T L LHD+EEE K L +HSEKLA+ F I+
Sbjct: 571 VHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGIL-- 628
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ R IR++KN+R+C DCHN MK S ++G+ I++RDS+RFHHF CSC DYW
Sbjct: 629 -AIPAGRP-IRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 182/381 (47%), Gaps = 37/381 (9%)
Query: 39 PQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
P+ F+ H + ++ L AR LFD+MP+R+VVSW A++SGYAQ+G +E +F
Sbjct: 27 PEFDFLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE 86
Query: 99 LLQYFFPNEFSLA-SVLISCDYLHGKLVHALAL-KFSLDAHVYVANALINMYSK-SCADE 155
+ P + S++ + +++ +G++ A L + D + N ++ Y K + +
Sbjct: 87 M-----PCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVD 141
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACK--LEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A +F+ M R+ +SWN+MI+ + LEAQ + + +++ + + GM
Sbjct: 142 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGML 201
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYG-----------FE----DDTVIANALI 258
+ + G+ E+++ + +++IA Y FE + N +I
Sbjct: 202 DE------ARRVFDGM-PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMI 254
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD---SA 315
YA+ G I+ ++ FD+M D +SW +I+ YA G +EAL LF M + +
Sbjct: 255 TGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 314
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF S LS C+ ++ G +V H + G+ ++ + + G I +A ++ E
Sbjct: 315 TFTSTLSTCAEIAALELGKQV-HGRVVKAGLESGCYVGNALLVMYCKCGNIDDA-YIVFE 372
Query: 376 MPMEPDSVIWSVLLGSCRKHG 396
E + V W+ ++ +HG
Sbjct: 373 GIEEKEVVSWNTMIAGYARHG 393
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/597 (37%), Positives = 347/597 (58%), Gaps = 34/597 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L +C ++ A ++H H++ N QD F+ LINMY+ F +D+AR +FD+
Sbjct: 73 YELLILSCTHQNSLLDAQRVHRHLLEN--GFDQDPFLATKLINMYSFFDSIDNARKVFDK 130
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISC-------DY 119
R + + AL + G+ EE ++ + P++ F+ VL +C
Sbjct: 131 TRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSL 190
Query: 120 LH-GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
L+ G+ +HA L+ D +V++ L++MY+K C A VF M +NV+SW++MIA
Sbjct: 191 LNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIAC 250
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQL--QREGMAPDWCTFSIVLKACAGLVTERHA 235
+ AK EAL LFR+L + + + P+ T VL+ACA L
Sbjct: 251 Y-------------AKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQG 297
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H I + G + + +AL+ YARCG + L ++VFD+M D+VSWNS++ +Y +H
Sbjct: 298 RLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVH 357
Query: 296 GQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G K+A+ +F M V+P +FVS+L ACSHAGLV EG +F+SM HG+ P ++H
Sbjct: 358 GFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEH 417
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
YACMVDLLGR R+ EA K+I M +EP +W LLGSCR H LAE A+ +L LE
Sbjct: 418 YACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLE 477
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
P ++ +V +++IY +G ++ + ++K ++ ++K PG SWIE++ +++ F S + +
Sbjct: 478 PTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVN 537
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+ E + L +L +LK GYVP+T + L+D++ KE + HSEKLA+ F ++N
Sbjct: 538 PRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSS- 596
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ VIRI K++R+C DCH+F K S KEI+VRD NRFHHF+D +CSC DYW
Sbjct: 597 ---KGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P T+ +++ +C + A VH + + GF+ D +A LI+ Y+ SI +++V
Sbjct: 68 PAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKV 127
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHA--- 327
FDK + +N++ +A +L G +E L ++ MN + D T+ +L AC +
Sbjct: 128 FDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECF 187
Query: 328 -GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
L+ +G ++ H+ + HG + +VD+ + G + A + +MP++ + V WS
Sbjct: 188 VSLLNKGREI-HAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVK-NVVSWS 245
Query: 387 VLLGSCRKHGE 397
++ K+G+
Sbjct: 246 AMIACYAKNGK 256
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/560 (39%), Positives = 337/560 (60%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF---- 96
D+FV N L++ Y+K Y+D A++LFDEMP+ + VS+ +I+GYA +G E+ F LF
Sbjct: 278 DIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQ 337
Query: 97 -CSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
S + FP L+ I + G+ HA A+ + + V V NAL++MY+K C
Sbjct: 338 GTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAK-CEKF 396
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
++A ++F N+ +RN + W ++I+ ++ + EEAL +F+++ RE +
Sbjct: 397 EDANRIFANLAYRNSVPWTAIIS-------------IYVQKGFHEEALKMFKEMNRENVH 443
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D TF+ LKA A L + +HS + + G + L+ YA CGS+ + +V
Sbjct: 444 GDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEV 503
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F +M ++V WN+++ AY+ +G A+ F++M + PDS +F+S+L+ACSH GLV
Sbjct: 504 FKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLV 563
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++ F+SM + + + P+ HYA M+D+L R GR EAE LI EMP EPD V+WS +L
Sbjct: 564 EKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLN 623
Query: 391 SCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
SCR H LA+ AA +L +++ D+ +V MSNIY +G + A ++K M+ V+K
Sbjct: 624 SCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKK 683
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
SW+EI++RVH F + + HPQ E I +K+ L+ + GY P+TS L +++EE
Sbjct: 684 VTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEM 743
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K E L +HSE+LA+ FA++N E S I IMKN+R CVDCH +K+ S ++G+EI V
Sbjct: 744 KIESLKYHSERLAIAFALIN----TPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITV 799
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RDS+RFHHF+D CSC DYW
Sbjct: 800 RDSSRFHHFRDGSCSCGDYW 819
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 209/432 (48%), Gaps = 41/432 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ATL +K+ +Q+H H+I F L V N L++ Y K LD A LF
Sbjct: 146 FATLLSGFDDTTTLKEVLQIHSHIIRFGFS---ASLIVFNSLVDSYCKTCCLDIASQLFS 202
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVL----ISCDYLH 121
EMP ++ VS+ +I+GY ++G EE +LF + F P+ F+ A++L S D +
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +H LA+K S ++VANAL++ YSK D A +F+ M + +S+N +I
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG--- 319
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA-----GLVTERHA 235
+A E++ LF++LQ F+ +L A + + HA
Sbjct: 320 ----------YAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHA 369
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
AV + + + NAL+ YA+C + ++F + Y + V W +I+ Y
Sbjct: 370 QAVVTTAVS-----EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQK 424
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G +EAL++F M NV D ATF S L A ++ V G K HS + G++ +
Sbjct: 425 GFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLG-KQLHSSVIRLGLLSSVFS 483
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQ 410
+ +VD+ G + +A ++ +EMP + + V W+ L+ + ++G E + A
Sbjct: 484 GSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISAYSQNGDAEATFSSFADMIESG 542
Query: 411 LEPGDSLGFVQM 422
L P DS+ F+ +
Sbjct: 543 LYP-DSVSFLSV 553
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 178/378 (47%), Gaps = 30/378 (7%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
I +A QL + M ++ N +++ Y K L AR LF+ M RN VSWT +I
Sbjct: 62 IAKARQLFDEM------PYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMI 115
Query: 81 SGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD---YLHGKL-VHALALKFSLD 135
GY+Q+ +E F L+ + + P+ + A++L D L L +H+ ++F
Sbjct: 116 GGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFS 175
Query: 136 AHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
A + V N+L++ Y K+C D A ++F M ++ +S+N MI + K
Sbjct: 176 ASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGY-------------TKY 222
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
EEAL LF Q++ P TF+ +L G +H L K + D +A
Sbjct: 223 GFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVA 282
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
NAL+ Y++ I L+K +FD+M D VS+N I+ YA +GQ +++ LF + +
Sbjct: 283 NALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFD 342
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
+ F ++LS + + G + H+ V ++ +VD+ + + +A +
Sbjct: 343 RKNFPFATMLSVAAIELNLSMGRQT-HAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANR 401
Query: 372 LIREMPMEPDSVIWSVLL 389
+ + +SV W+ ++
Sbjct: 402 IFANLAYR-NSVPWTAII 418
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 128/264 (48%), Gaps = 23/264 (8%)
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM--KNE--------------- 197
+A ++F+ M +RN S N M++ + + +A ELF M +NE
Sbjct: 64 KARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQ 123
Query: 198 -EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
+EA L+ ++ R G+ PD TF+ +L T + +HS I ++GF ++ N+
Sbjct: 124 PKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNS 183
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPD 313
L+ +Y + + ++ Q+F +M D VS+N ++ Y +G +EAL+LF NM+ QP
Sbjct: 184 LVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPS 243
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
TF ++L + V G ++ H + V + ++D + I A+ L
Sbjct: 244 GFTFAAMLGMSVGSEDVIFGQQI-HGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLF 302
Query: 374 REMPMEPDSVIWSVLLGSCRKHGE 397
EMP E D V +++++ +G+
Sbjct: 303 DEMP-ELDGVSYNIIITGYAWNGQ 325
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
++ + G P+ F+ LK LV + L + + + + + N ++ Y +
Sbjct: 36 RIVKTGFDPEISRFNFKLK---DLVRANQIAKARQLFDEMPYRNTSSV-NMMVSGYVKSR 91
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
++ ++++F+ M + VSW ++ Y+ + Q KEA L++ M V+PD TF +LLS
Sbjct: 92 NLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLS 151
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
++E ++ HS + G L + +VD + + A +L EMP + DS
Sbjct: 152 GFDDTTTLKEVLQI-HSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTK-DS 209
Query: 383 VIWSVLLGSCRKHG 396
V ++V++ K+G
Sbjct: 210 VSFNVMITGYTKYG 223
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/669 (34%), Positives = 355/669 (53%), Gaps = 100/669 (14%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ + + LF CA K Q+H ++ D FV + +MY + G + D
Sbjct: 112 LIPDSHVLPNLFKVCAELSAFKVGKQIH--CVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY------------------ 102
AR +FD M ++VV+ +AL+ YA+ G EE R+ +
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 103 ------------------FFPNEFSLASVLISC---DYLH-GKLVHALALKFSLDAHVYV 140
F P++ +++SVL S + L+ G+L+H +K L V
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289
Query: 141 ANALINMYSKS--------------------------------CADEAWKVFE-----NM 163
+A+I+MY KS D+A ++FE M
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTM 349
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
E NV+SW S+IA C + IE AL LFR++Q G+ P+ T +L
Sbjct: 350 EL-NVVSWTSIIAG---CAQNGKDIE----------ALELFREMQVAGVKPNHVTIPSML 395
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
AC + H + H + D+ + +ALI YA+CG I+LS+ VF+ M +LV
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
WNS++ +++HG+AKE + +F ++ ++PD +F SLLSAC GL EG K F M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
E +G+ P+L+HY+CMV+LLGR G++ EA LI+EMP EPDS +W LL SCR L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
AE+AA KL LEP + +V +SNIY G + + IR +M+ ++K PG SWI+++N
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEK 520
RV+ +G K HPQ + I +K++E+ +++ G+ P ALHD+EE+ +E+ L+ HSEK
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 521 LALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
LA+VF ++N + + ++++KN+RIC DCH +K S G+EI +RD+NRFHHFKD
Sbjct: 696 LAVVFGLLNT----PDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKD 751
Query: 581 RICSCNDYW 589
ICSC D+W
Sbjct: 752 GICSCGDFW 760
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 187/441 (42%), Gaps = 75/441 (17%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D +++ LI Y+ + +DA + +P + S+++LI + + +F +
Sbjct: 49 DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108
Query: 101 QY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ P+ L ++ C L GK +H ++ LD +V ++ +MY + C
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMR-CGRM 167
Query: 154 DEAWKVFENMEFRNVISWNSMIAAF--RAC---------KLEAQAIEL-----------F 191
+A KVF+ M ++V++ ++++ A+ + C ++E+ IE F
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+ +EA+ +F+++ G PD T S VL + +H + K G D
Sbjct: 228 NRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK 287
Query: 252 VIANALIHAYARCGSI-----------------------SLSK-----------QVFDKM 277
+ +A+I Y + G + LS+ ++F +
Sbjct: 288 CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQ 347
Query: 278 TYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
T ++VSW SI+ A +G+ EAL+LF M V+P+ T S+L AC + + G
Sbjct: 348 TMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG 407
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ H ++ + + ++D+ + GRI ++ + MP + + V W+ L+
Sbjct: 408 RSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFS 465
Query: 394 KHGETR-----LAELAATKLK 409
HG+ + L T+LK
Sbjct: 466 MHGKAKEVMSIFESLMRTRLK 486
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 137/345 (39%), Gaps = 87/345 (25%)
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
HA LK Y++ LI YS +C ++A V +++ + S++S+I A KL
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
Q+I +F++M + G+ PD + K CA L + +H +
Sbjct: 98 TQSIGVFSRMFSH-------------GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCV 144
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD----------------------- 281
G + D + ++ H Y RCG + +++VFD+M+ D
Sbjct: 145 SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRI 204
Query: 282 ------------LVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSH 326
+VSWN IL + G KEA+ +F ++ PD T S+L +
Sbjct: 205 LSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD 264
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI-------------------- 366
+ ++ G ++ H + G++ + M+D+ G+ G +
Sbjct: 265 SEMLNMG-RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 367 --------------LEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
LE +L +E ME + V W+ ++ C ++G+
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 342/591 (57%), Gaps = 30/591 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA + QLH +I + D F+ LI+MY+K +DDAR +F M
Sbjct: 216 SSALKACAGMALRELGRQLHSSLIKM--DMGSDSFLGVGLIDMYSKCNSMDDARLVFKLM 273
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHG----K 123
P+R++++W A+ISG++Q+ EE LF + + N+ +L++VL S L +
Sbjct: 274 PERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCR 333
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HAL+LK + YV N+LI+ Y K C ++A +VFE +++ + S++ A+
Sbjct: 334 QIHALSLKSGFEFDNYVVNSLIDTYGK-CGHVEDATRVFEESPIVDLVLFTSLVTAY--- 389
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ EEAL L+ ++Q G+ PD S +L ACA L VH
Sbjct: 390 ----------AQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVH 439
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K+GF D N+L++ YA+CGSI + F ++ +VSW++++ A HG KEA
Sbjct: 440 ILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEA 499
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQLF M V P+ T VS+L AC+HAGLV E F+SM G+ P +HYACM+D
Sbjct: 500 LQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMID 559
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G++ A +L+ +MP + ++++W LLG+ R H L E AA L LEP S
Sbjct: 560 LLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGT 619
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
V ++NIY G ++K +R+ MK +V+K PG+SW+E++++V+ F G + H + I
Sbjct: 620 HVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEI 679
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ KL+EL LK GYVP + LHD+E KE+ LYHHSEKLA+ F ++ +
Sbjct: 680 YAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIAT----PPGA 735
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+RIC DCH +K S ++ +EI+VRD+NRFHHF++ CSC +YW
Sbjct: 736 PIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 200/400 (50%), Gaps = 28/400 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC + ++ Q+H ++ D FV N L+ +YAK G DAR LFD
Sbjct: 13 FPSVLKACTVTKDLVLGKQVHGIVV--VTGFDSDEFVANSLVILYAKCGGFGDARSLFDA 70
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHG 122
+P R+VVSW AL S Y E LF + L PNEFSL+S++ C D + G
Sbjct: 71 IPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQG 130
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K D+ + ANAL++MY+K ++A VF+ + +++SWN++IA C
Sbjct: 131 RKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIA---GC 187
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L + AL L R++ + GM P+ T S LKACAG+ +HS
Sbjct: 188 VLH----------EYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSS 237
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K D+ + LI Y++C S+ ++ VF M D+++WN+++ ++ + + +EA
Sbjct: 238 LIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEA 297
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGN--KVFHSMLENHGVVPQLDHYAC--MV 357
LF M+ + +L + +Q + H++ G + D+Y ++
Sbjct: 298 ASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGF--EFDNYVVNSLI 355
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
D G+ G + +A ++ E P+ D V+++ L+ + + G+
Sbjct: 356 DTYGKCGHVEDATRVFEESPI-VDLVLFTSLVTAYAQDGQ 394
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 160/327 (48%), Gaps = 29/327 (8%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVF 160
NEF+ SVL +C D + GK VH + + D+ +VAN+L+ +Y+K +A +F
Sbjct: 9 NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+ + R+V+SWN++ + + + +A+ LF M G+ P+ + S
Sbjct: 69 DAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDM-------------VLSGIRPNEFSLS 115
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
++ C GL +H + K G++ D ANAL+ YA+ G + + VFD++
Sbjct: 116 SMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKP 175
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+VSWN+I+ LH AL+L MN + P+ T S L AC+ L + G ++
Sbjct: 176 DIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLH 235
Query: 338 HSMLE-NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
S+++ + G L ++D+ + + +A + + MP E D + W+ ++ H
Sbjct: 236 SSLIKMDMGSDSFLG--VGLIDMYSKCNSMDDARLVFKLMP-ERDMIAWNAVISG---HS 289
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMS 423
+ E AA+ L L + +GF Q +
Sbjct: 290 QNEEDEEAAS-LFPLMHTEGIGFNQTT 315
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 110/208 (52%), Gaps = 19/208 (9%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ ++L +ACA +Q Q+H H++ F + D+F N L+NMYAK G ++DA F
Sbjct: 416 VCSSLLNACASLSAYEQGKQVHVHILKFGFMS---DIFAGNSLVNMYAKCGSIEDASCAF 472
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKL 124
+P R +VSW+A+I G AQHG +E +LF +L+ PN +L SVL +C+ H L
Sbjct: 473 SRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACN--HAGL 530
Query: 125 V-------HALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFR-NVISWNSMI 175
V +++ + F ++ +I++ ++ E A ++ M F+ N + W +++
Sbjct: 531 VAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALL 590
Query: 176 AAFRACK---LEAQAIELFAKMKNEEEA 200
A R K L QA E+ ++ E+
Sbjct: 591 GAARIHKNIDLGEQAAEMLLALEPEKSG 618
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/591 (36%), Positives = 339/591 (57%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + AC +++ Q+H H++ + D+ V+ L MY K G DAR +F+
Sbjct: 233 YMNVLSACGSLAALEKGKQIHAHIVES--EYHSDVRVSTALTKMYMKCGAFKDAREVFEC 290
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
+ R+V++W +I G+ G EE F +L+ P+ + +VL +C G
Sbjct: 291 LSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARG 350
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +HA A K L + V NALINMYSK+ + +A +VF+ M R+V+SW +++ + C
Sbjct: 351 KEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADC 410
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
Q +E F F+Q+ ++G+ + T+ VLKAC+ V + +H+
Sbjct: 411 D---QVVESFTT----------FKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAE 457
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G D + NAL+ Y +CGS+ + +VF+ M+ D+V+WN+++ +G+ EA
Sbjct: 458 VVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEA 517
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQ + M ++P++ATFV++LSAC LV+EG + F M +++G+VP HYACMVD
Sbjct: 518 LQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVD 577
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+L R G + EAE +I +P++P + +W LL +CR H + E AA +LEP ++
Sbjct: 578 ILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGL 637
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +S IY +G + +RK MK V+K PG SWIEI VH F + + HP+ + I
Sbjct: 638 YVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEI 697
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +LE L Q+K +GYVP+T +HD+++E KE + HHSEKLA+ + +++ +
Sbjct: 698 YAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPP----GT 753
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+C DCH K S + +EI+ RD++RFHHFK+ CSC DYW
Sbjct: 754 PIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 206/394 (52%), Gaps = 30/394 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNF--PNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y L +C ++ Q+HEH++ PN +++TN L+ +YA G +++AR LF
Sbjct: 31 YVKLLQSCVKAKDLAVGKQVHEHILRCGVKPN----VYITNTLLKLYAHCGSVNEARQLF 86
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH--- 121
D+ ++VVSW +ISGYA G A+E F LF + Q P++F+ S+L +C
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H ++ L V NALI+MY+K +A +VF+ M R+ +SW ++ A+
Sbjct: 147 WGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY- 205
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+ EE+L + + +E + P T+ VL AC L +H
Sbjct: 206 ------------AESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ I + + D ++ AL Y +CG+ +++VF+ ++Y D+++WN++++ + GQ +
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA F M V PD AT+ ++LSAC+ G + G ++ H+ G+V + +
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEI-HARAAKDGLVSDVRFGNAL 372
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+++ + G + +A ++ MP + D V W+ LLG
Sbjct: 373 INMYSKAGSMKDARQVFDRMP-KRDVVSWTTLLG 405
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 176/398 (44%), Gaps = 60/398 (15%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ + +L SC D GK VH L+ + +VY+ N L+ +Y+ +EA ++F
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+ ++V+SWN MI+ + A +EA LF +Q+E + PD TF
Sbjct: 87 DKFSNKSVVSWNVMISGY-------------AHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L AC+ +H + + G +DT + NALI YA+CGS+ +++VFD M
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV- 336
D VSW ++ AYA G +E+L+ + M V+P T++++LSAC +++G ++
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 337 -------FHSMLENHGVVPQL-----------DHYAC-----------MVDLLGRVGRIL 367
+HS + + ++ + + C M+ G++
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 368 EAEKLIREMPME---PDSVIWSVLLGSC-RKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
EA M E PD ++ +L +C R G R E+ A K D +
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALI 373
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
N+Y +GS AR + M V +SW + R
Sbjct: 374 NMYSKAGSMKDARQVFDRMPKRDV-----VSWTTLLGR 406
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+ + L R+G D + +L++C VH I + G + + I N L+ YA
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVS 319
CGS++ ++Q+FDK + +VSWN ++ YA G A+EA LF+ M ++PD TFVS
Sbjct: 75 HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+LSACS ++ G ++ ++E G+ ++ + + G + +A ++ M
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEA-GLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 380 PDSVIWSVLLGSCRKHG 396
D V W+ L G+ + G
Sbjct: 194 -DEVSWTTLTGAYAESG 209
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/579 (38%), Positives = 345/579 (59%), Gaps = 36/579 (6%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G I A +L+E + + +D +I+ K G +D+AR +FDEM +R+V++WT
Sbjct: 155 GRIDDACKLYEMIPD------KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL-HGKLVHALALKFSLDAH 137
+++GY Q+ ++ ++F + + E S S+L+ Y+ +G++ A L +
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPE---KTEVSWTSMLMG--YVQNGRIEDAEELFEVMPVK 263
Query: 138 VYVA-NALIN-MYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
+A NA+I+ + K +A +VF++M+ RN SW ++I E EL
Sbjct: 264 PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH-----ERNGFEL----- 313
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL LF +Q++G+ P + T +L CA L + H VH+ + + F+ D +A+
Sbjct: 314 ---EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVAS 370
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQ 311
L+ Y +CG + SK +FD+ D++ WNSI+ YA HG +EAL++F M + +
Sbjct: 371 VLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTK 430
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P+ TFV+ LSACS+AG+V+EG K++ SM GV P HYACMVD+LGR GR EA +
Sbjct: 431 PNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAME 490
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
+I M +EPD+ +W LLG+CR H + +AE A KL ++EP +S ++ +SN+Y G
Sbjct: 491 MIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGR 550
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG-KRHPQREAIFKKLEELIGQLK 490
+ +RK MK VRK PG SW E+EN+VH F GG HP++E+I K L+EL G L+
Sbjct: 551 WADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLR 610
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GY P+ S ALHD++EE K L +HSE+LA+ +A++ E IR+MKN+R+C
Sbjct: 611 EAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLK----LSEGIPIRVMKNLRVCS 666
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +K+ S + +EI++RD+NRFHHF++ CSC DYW
Sbjct: 667 DCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 171/374 (45%), Gaps = 40/374 (10%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
+ + P+ +++ N L++ Y K G +D+AR +FD MP+RNVVSWTAL+ GY +G +
Sbjct: 70 LFDEMPD--RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVD 127
Query: 91 ECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVHALAL-KFSLDAHVYVANALINMY 148
LF + + N+ S +LI +L G++ A L + D ++I+
Sbjct: 128 VAESLFWKMPE---KNKVSWTVMLIG--FLQDGRIDDACKLYEMIPDKDNIARTSMIHGL 182
Query: 149 SKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K DEA ++F+ M R+VI+W +M+ + A ++F M + E
Sbjct: 183 CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV------- 235
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
W + + G V L + + NA+I + G I
Sbjct: 236 -------SWTSMLM------GYVQNGRIEDAEELFEVMPVK-PVIACNAMISGLGQKGEI 281
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ +++VFD M + SW +++K + +G EAL LF M V+P T +S+LS C
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDS 382
+ + G +V ++ +D Y + ++ + + G +++++ + P + D
Sbjct: 342 ASLASLHHGKQVHAQLVRCQF---DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK-DI 397
Query: 383 VIWSVLLGSCRKHG 396
++W+ ++ HG
Sbjct: 398 IMWNSIISGYASHG 411
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 147/358 (41%), Gaps = 71/358 (19%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
N I ++ G + +AR LFD +++ SW ++++GY + + +LF +
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 104 FPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFEN 162
D ++ N L++ Y K+ DEA KVF+
Sbjct: 75 ------------------------------PDRNIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKM--KNEEEALFLFRQLQREGMAPDWCTFS 220
M RNV+SW +++ + A LF KM KN+ + ++G D C
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL- 163
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+ +I + D + ++IH + G + ++++FD+M+
Sbjct: 164 ------------------YEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+++W +++ Y + + +A ++F M + ++ S+L G +++ ++F
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAEELFE-- 258
Query: 341 LENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
V+P AC M+ LG+ G I +A ++ M E + W ++ ++G
Sbjct: 259 -----VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVIKIHERNG 310
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA K+F++ + +++ SWNSM+A + A + A +LF +M + + G+
Sbjct: 35 EARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN-------IISWNGLVS 87
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ G + E A V L+ E + V AL+ Y G + +++ +F
Sbjct: 88 GYMK--------NGEIDE--ARKVFDLMP----ERNVVSWTALVKGYVHNGKVDVAESLF 133
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGN 334
KM + VSW +L + G+ +A +L+ M D+ S++ G V E
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F M E + + MV G+ R+ +A K+ MP E V W+ +L +
Sbjct: 193 EIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQ 246
Query: 395 HGETRLAE 402
+G AE
Sbjct: 247 NGRIEDAE 254
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
AN I +R G I ++++FD + SWNS++ Y + ++A +LF M PD
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---PD 76
Query: 314 S--ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
++ L+S G + E KVF M E + V + +V G++ AE
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV-----SWTALVKGYVHNGKVDVAES 131
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG-DSLGFVQMSNIYCLSG 430
L +MP E + V W+V+L + G R+ + A KL ++ P D++ M + C G
Sbjct: 132 LFWKMP-EKNKVSWTVMLIGFLQDG--RIDD--ACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 431 SFNKARLIRKEM 442
++AR I EM
Sbjct: 187 RVDEAREIFDEM 198
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/623 (35%), Positives = 348/623 (55%), Gaps = 59/623 (9%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLD------- 59
+++ L +C ++ QLH +I + D F++NHL+N+Y+K G LD
Sbjct: 54 LFSHLLQSCISENSLSLGKQLHSLIITS--GCSSDKFISNHLLNLYSKCGQLDTAITLFG 111
Query: 60 ------------------------DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL 95
AR +FDEMP+RNV +W A+++G Q EE L
Sbjct: 112 VMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGL 171
Query: 96 FCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK 150
F + + F P+EF+L SVL C L G+ VH K + ++ V ++L +MY K
Sbjct: 172 FSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMK 231
Query: 151 SCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+ E ++ M +NV++WN++IA A+ EE L + ++
Sbjct: 232 CGSLGEGERLIRAMPSQNVVAWNTLIAG-------------RAQNGYPEEVLDQYNMMKM 278
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
G PD TF V+ +C+ L T +H+ + K G + ++LI Y+RCG +
Sbjct: 279 AGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEY 338
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
S +VF + D+V W+S++ AY HG+ EA+ LF+ M ++ + TF+SLL ACSH
Sbjct: 339 SLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSH 398
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
GL ++G K F M+E +GV P+L+HY CMVDLLGR G + EAE LIR MP++ D + W
Sbjct: 399 CGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWK 458
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL +C+ H +T +A + ++ +L+P D + +V +SNI+ ++ +RK M+ +
Sbjct: 459 TLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRK 518
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
++K PG+SW+E++N++H+F G K HP+ I L EL ++K GYVP+ LHD++
Sbjct: 519 LKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMD 578
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
E KE L HHSEKLA+ FA++ + IR++KN+R+C DCH +K S++ +E
Sbjct: 579 VEDKEYSLVHHSEKLAIAFALLYTPV----GTPIRVIKNLRVCSDCHVAIKYISEISNRE 634
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+VRDS+RFHHFK+ CSC DYW
Sbjct: 635 IIVRDSSRFHHFKNGRCSCGDYW 657
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/562 (38%), Positives = 330/562 (58%), Gaps = 30/562 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ L+ YA GY++ AR++FDE+P ++VVSW A+ISGY + GN +E LF +
Sbjct: 127 RDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEM 186
Query: 100 LQY-FFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
++ P+E ++ +V+ S G+ VH+ +++ + NALI+ YSK C +
Sbjct: 187 MKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSK-CGE 245
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +F + +++VISWN +I + L +EAL LF+++ R G
Sbjct: 246 METACGLFLGLSYKDVISWNILIGGYTHLNLY-------------KEALLLFQEMLRSGE 292
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLS 270
+P+ T +L ACA L +H I K G + + + +LI Y++CG I +
Sbjct: 293 SPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAA 352
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHA 327
QVF+ M + L +WN+++ +A+HG+A A +FS M ++PD TFV LLSACSHA
Sbjct: 353 HQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHA 412
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G++ G +F SM N+ + P+L+HY CM+DLLG G EAE++I M MEPD VIW
Sbjct: 413 GMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCS 472
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +C+ HG L E A L ++EP + +V +SNIY +G +N+ IR + +
Sbjct: 473 LLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGM 532
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS L ++EE
Sbjct: 533 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEE 592
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S + +EI
Sbjct: 593 EFKEGALRHHSEKLAIAFGLIST----KPETKLTIVKNLRVCRNCHEATKLISKIYKREI 648
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+ RD RFHHF+D +CSCNDYW
Sbjct: 649 IARDRTRFHHFRDGVCSCNDYW 670
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 191/418 (45%), Gaps = 32/418 (7%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F+ + + N++ W + G+A + +L+ C + PN ++ +
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69
Query: 114 LISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNV 168
L SC L G +H LK + +YV +LI+MY ++ ++A KVF+ R+V
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMK------------------NEEEALFLFRQLQRE 210
+S+ +++ + + A +F ++ N +EAL LF+++ +
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ A A + VHS IA +GF + I NALI Y++CG + +
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F ++Y D++SWN ++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 250 CGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHL 309
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ GV ++D+ + G I A ++ M + W
Sbjct: 310 GAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAW 367
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG A +++++ E D + FV + + +G + R I + M
Sbjct: 368 NAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSM 425
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ HACA G I +H ++ + LI+MY+K G ++ A +F+ M
Sbjct: 301 SILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSML 360
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY 119
+++ +W A+I G+A HG A F +F + + P++ + +L +C +
Sbjct: 361 HKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSH 411
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/558 (39%), Positives = 319/558 (57%), Gaps = 27/558 (4%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL- 100
+ V L++MYAK L AR +FD M RN VSW+A+I GY +E LF ++
Sbjct: 245 VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMIL 304
Query: 101 -QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
P +L SVL +C D G+ +H +K + + N L++MY+K D
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVID 364
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A + F+ M ++ +S++++++ + N AL +FR +Q G+ P
Sbjct: 365 DAIRFFDXMNPKDSVSFSAIVSGC-------------VQNGNAAVALSIFRMMQLSGIDP 411
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T VL AC+ L +H H + GF DT+I NALI Y++CG IS +++VF
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
++M HD+VSWN+++ Y +HG EAL LF ++ ++PD TF+ LLS+CSH+GLV
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 531
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F +M + +VP+++H CMVD+LGR G I EA IR MP EPD IWS LL +
Sbjct: 532 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR H L E + K++ L P + FV +SNIY +G ++ A IR K ++K P
Sbjct: 592 CRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIP 651
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SWIEI VH F G + H Q I +KLEEL+ ++K +GY E S D+EEE KE
Sbjct: 652 GCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKE 711
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L +HSEKLA+ F I+N + I + KN+R+C DCH +K + + +EI VRD
Sbjct: 712 QILLYHSEKLAIAFGILNL----KAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRD 767
Query: 572 SNRFHHFKDRICSCNDYW 589
+NRFHHFK+ C+C D+W
Sbjct: 768 ANRFHHFKNGTCNCGDFW 785
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 202/418 (48%), Gaps = 28/418 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L AC ++ +A ++H+H + N N D V + L +Y + AR LFDE
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSN--ADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HG 122
+P +V+ W +I YA +G + L+ S+L PN+++ VL +C L G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H+ A F L++ V+V AL++ Y+K EA ++F +M R+V++WN+MIA C
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG---C 185
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L ++A+ L Q+Q EG+ P+ T VL H A+H
Sbjct: 186 SLYGLC----------DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGY 235
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ F++ V+ L+ YA+C + ++++FD M + VSW++++ Y KEA
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEA 295
Query: 302 LQLFSNMNVQ----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
L+LF M ++ P T S+L AC+ + G K+ H + G V + ++
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL-HCYIIKLGXVLDILLGNTLL 354
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+ + G I +A + M DSV +S ++ C ++G +A L+ ++ QL D
Sbjct: 355 SMYAKCGVIDDAIRFFDXMN-PKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQLSGID 410
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/615 (35%), Positives = 353/615 (57%), Gaps = 37/615 (6%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
++ T+ AC G+ + ++H+ I D F+ N LI+ Y K ++ AR +F
Sbjct: 133 SVFLTVAKACGASGDASRVKEVHDDAIRC--GMMSDAFLGNALIHAYGKCKCVEGARRVF 190
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYL 120
D++ ++VVSWT++ S Y G +FC + PN +L+S+L +C D
Sbjct: 191 DDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLK 250
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H A++ + +V+V +AL+++Y++ + +A VF+ M R+V+SWN ++ A+
Sbjct: 251 SGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYF 310
Query: 180 ACKLEAQAIELFAKMKNE----------------------EEALFLFRQLQREGMAPDWC 217
+ + + LF++M ++ E+A+ + R++Q G P+
Sbjct: 311 TNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQI 370
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T S L AC+ L + R VH + ++ D AL++ YA+CG ++LS+ VFD +
Sbjct: 371 TISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMI 430
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
D+V+WN+++ A A+HG +E L LF +M ++P+S TF +LS CSH+ LV+EG
Sbjct: 431 CRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGL 490
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F+SM +H V P +HYACMVD+ R GR+ EA + I+ MPMEP + W LLG+CR
Sbjct: 491 QIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRV 550
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
+ LA+++A KL ++EP + +V + NI + +++A R MK + K PG S
Sbjct: 551 YKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCS 610
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W+++ +RVH F G K + + + I+ L+EL ++K GY P+T L DI++E K E L
Sbjct: 611 WLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESL 670
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ F I+N +S IR+ KN+RIC DCHN +K S ++G I+VRDS R
Sbjct: 671 CSHSEKLAVAFGILNLNG----QSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLR 726
Query: 575 FHHFKDRICSCNDYW 589
FHHF++ CSC D W
Sbjct: 727 FHHFRNGNCSCQDLW 741
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 154/312 (49%), Gaps = 23/312 (7%)
Query: 47 HLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFP 105
L+ G A+ LFD +P+ + + + LIS + G E RL+ SL + P
Sbjct: 71 RLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKP 130
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ +V +C D K VH A++ + + ++ NALI+ Y K C + A +VF
Sbjct: 131 HNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVF 190
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+++ ++V+SW SM + + C L + +F +M G+ P+ T S
Sbjct: 191 DDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMG-------------WNGVKPNSVTLS 237
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L AC+ L + A+H ++G ++ + +AL+ YARC S+ ++ VFD M +
Sbjct: 238 SILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHR 297
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+VSWN +L AY + + + L LFS M+ V+ D AT+ +++ C G ++ ++
Sbjct: 298 DVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEML 357
Query: 338 HSMLENHGVVPQ 349
M +N G P
Sbjct: 358 RKM-QNLGFKPN 368
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 57/302 (18%)
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A ++F+N+ + + +++I+AF L +AI L+A L+ G+ P
Sbjct: 84 RAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYA-------------SLRARGIKP 130
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
F V KAC VH + G D + NALIHAY +C + +++VF
Sbjct: 131 HNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVF 190
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D + D+VSW S+ Y G + L +F M V+P+S T S+L ACS ++
Sbjct: 191 DDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLK 250
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP-------------- 377
G + H HG++ + + +V L R + +A + MP
Sbjct: 251 SG-RAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAY 309
Query: 378 --------------------MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
+E D W+ ++G C ++G+T E A L++++ +L
Sbjct: 310 FTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQT---EKAVEMLRKMQ---NL 363
Query: 418 GF 419
GF
Sbjct: 364 GF 365
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/606 (37%), Positives = 338/606 (55%), Gaps = 39/606 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A +G I++A L E DL N L+ + + L DAR LFD+
Sbjct: 176 WNGLLAAYVHNGRIEEACLLFE------SKSDWDLISWNCLMGGFVRKKKLGDARWLFDK 229
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
MP R+ +SW +ISGYAQ G + RLF P + Y+ ++
Sbjct: 230 MPVRDAISWNTMISGYAQGGGLSQARRLFDES-----PTRDVFTWTAMVSGYVQNGMLDE 284
Query: 128 LALKFS--LDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF------ 178
F + + NA+I Y ++ D A ++FE+M RN+ SWN+MI +
Sbjct: 285 AKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDI 344
Query: 179 ------------RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
R C A I +A+ + EEAL +F +++++G + + TF L C
Sbjct: 345 AQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTC 404
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
A + +H K G+ + NAL+ Y +CGSI + F+ + D+VSWN
Sbjct: 405 ADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWN 464
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
++L YA HG ++AL +F +M V+PD T V +LSACSH GL+ G + F+SM ++
Sbjct: 465 TMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKD 524
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL 403
+GV+P HY CM+DLLGR GR+ EA+ LIR MP +P + W LLG+ R HG T L E
Sbjct: 525 YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEK 584
Query: 404 AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVH 463
AA + ++EP +S +V +SN+Y SG + A +R +M+ V+K PG SW+E++N++H
Sbjct: 585 AAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIH 644
Query: 464 EFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLAL 523
F+ G HP++E I+ LEEL +++ GYV T L LHD+EEE KE L +HSEKLA+
Sbjct: 645 TFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAV 704
Query: 524 VFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRIC 583
F I+ ++ R IR+MKN+R+C DCH+ +K S ++G+ I++RDS+RFHHF + C
Sbjct: 705 AFGIL---TIPGGRP-IRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFC 760
Query: 584 SCNDYW 589
SC DYW
Sbjct: 761 SCGDYW 766
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 179/400 (44%), Gaps = 52/400 (13%)
Query: 33 NNFPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEE 91
N F P+ DLF N ++ Y + L DAR LFD MP+++VVSW +L+SGYAQ+G +E
Sbjct: 101 NLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDE 160
Query: 92 CFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKF--SLDAHVYVANALINMY- 148
+F ++ P + S++ + Y+H + L F D + N L+ +
Sbjct: 161 AREVFDNM-----PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFV 215
Query: 149 -SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF--LFR 205
K D W +F+ M R+ ISWN+MI+ + +QA LF + + + +
Sbjct: 216 RKKKLGDARW-LFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVS 274
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA----------- 254
+ GM + TF + E++ + +++IA Y IA
Sbjct: 275 GYVQNGMLDEAKTFFDEMP-------EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRN 327
Query: 255 ----NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
N +I Y + G I+ +++ FD M D VSW +I+ YA G +EAL +F +
Sbjct: 328 ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387
Query: 311 QPDS---ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH-YACMVD-----LLG 361
+S ATF LS C+ ++ G ++ HG ++ + C V +
Sbjct: 388 DGESLNRATFGCALSTCADIAALELGKQI-------HGQAVKMGYGTGCFVGNALLAMYF 440
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ G I EA + E D V W+ +L +HG R A
Sbjct: 441 KCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHGFGRQA 479
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 188/413 (45%), Gaps = 49/413 (11%)
Query: 15 CALH-GNIKQAMQLHEHMINNFPNEPQ----DLFVTNHLINMYAKFGYLDDARHLFDEMP 69
C ++ G+ + + E + NN N+P+ D+ N I+ + + G+ D A H+F+ MP
Sbjct: 19 CTINFGHTSTSTRRSESVTNN--NKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMP 76
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALA 129
+R+ VS+ A+ISGY ++ F L +L + +V+++ + +L A
Sbjct: 77 RRSSVSYNAMISGYLRNSK----FNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARR 132
Query: 130 LKFSL--DAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
L F L + V N+L++ Y+++ DEA +VF+NM +N ISWN ++AA
Sbjct: 133 L-FDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAA--------- 182
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAK 244
+ EEA LF DW ++ C G V ++ L K
Sbjct: 183 ----YVHNGRIEEACLLFES------KSDW---DLISWNCLMGGFVRKKKLGDARWLFDK 229
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
D + N +I YA+ G +S ++++FD+ D+ +W +++ Y +G EA
Sbjct: 230 MPVR-DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTF 288
Query: 305 FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
F M + + ++ ++++ + ++F SM + + M+ G++G
Sbjct: 289 FDEM-PEKNEVSYNAMIAGYVQTKKMDIARELFESM-----PCRNISSWNTMITGYGQIG 342
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
I +A K MP + D V W+ ++ + G A ++KQ G+SL
Sbjct: 343 DIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ--DGESL 392
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/575 (37%), Positives = 336/575 (58%), Gaps = 35/575 (6%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYF 103
N ++++Y G +D A +F+ M +R++VSW A+I+GY Q+G + + F +L
Sbjct: 233 NAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSM 292
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWK 158
P+EF++ SVL +C L GK +H+ L+ + + NALI+ Y+KS + E A +
Sbjct: 293 EPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARR 352
Query: 159 VFENMEFR--NVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------ 198
+ + NVIS+ +++ + QA E+F M N +
Sbjct: 353 IMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQND 412
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EA+ LFR + R G P+ T + VL ACA L + +H + E ++NA+I
Sbjct: 413 EAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAII 472
Query: 259 HAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
YAR GS+ L+++VFD++ + + V+W S++ A A HG ++A+ LF M V+PD
Sbjct: 473 TVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDR 532
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T++ + SAC+HAG + +G + + ML HG+VP++ HYACMVDLL R G + EA + I+
Sbjct: 533 VTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQ 592
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
MP+ PD+V+W LL +CR LAELAA KL ++P +S + ++N+Y G +N
Sbjct: 593 RMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWND 652
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
A I K K V+K G SW ++++VH F + HPQR+AI KK E+ ++K G+
Sbjct: 653 AARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGF 712
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
VP+ + LHD+++E KEE L HSEKLA+ F +++ E++ +RIMKN+R+C DCH
Sbjct: 713 VPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTP----EKTTLRIMKNLRVCNDCHT 768
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K S ++ +EI+VRD+ RFHHF+D CSC DYW
Sbjct: 769 AIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 203/446 (45%), Gaps = 96/446 (21%)
Query: 29 EHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN 88
+ ++ P ++ F N L++MYAK G L DAR +F +MP+R+ VSWT ++ G + G
Sbjct: 84 RRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGR 143
Query: 89 AEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANA 143
+ + F ++ + P++F L +VL SC G+ VH+ +K L + V VAN+
Sbjct: 144 FWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANS 203
Query: 144 LINMYSKSCAD----------------EAW-----------------KVFENMEFRNVIS 170
++ MY K C D +W +FENME R+++S
Sbjct: 204 VLYMYGK-CGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVS 262
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
WN++IA + L+ A++ F++M L M PD T + VL ACA L
Sbjct: 263 WNAIIAGYNQNGLDDMALKFFSRM------------LTASSMEPDEFTVTSVLSACANLR 310
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL--------------------- 269
+ +HS I + G + I NALI YA+ GS+
Sbjct: 311 MLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTAL 370
Query: 270 ------------SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
+++VFD M D+++W +++ Y +GQ EA++LF +M +P+S
Sbjct: 371 LEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNS 430
Query: 315 ATFVSLLSACSHAGLVQEGNKV----FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
T ++LSAC+ + G ++ S+ E V ++ + R G + A
Sbjct: 431 HTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSN-----AIITVYARSGSVPLAR 485
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHG 396
++ ++ ++V W+ ++ + +HG
Sbjct: 486 RVFDQICWRKETVTWTSMIVALAQHG 511
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 152/342 (44%), Gaps = 62/342 (18%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKS-----CADEAWKVFENMEF--RNVISWNSM 174
G+ +HA A+K L Y+ N L++ Y+++ C EA ++F+++ + RN +WNS+
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 175 IAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDW 216
++ + A A +FA+M + +A+ F + EG+AP
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
+ VL +CA VHS + K G +AN++++ Y +CG ++ VF++
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 277 MTY-------------------------------HDLVSWNSILKAYALHGQAKEALQLF 305
M +VSWN+I+ Y +G AL+ F
Sbjct: 224 MKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFF 283
Query: 306 SNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
S M +++PD T S+LSAC++ +++ G K HS + G+ ++
Sbjct: 284 SRMLTASSMEPDEFTVTSVLSACANLRMLKMG-KQMHSYILRTGMPYSSQIMNALISTYA 342
Query: 362 RVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRKHGETRLAE 402
+ G + A +++ + + +VI ++ LL K G+T+ A
Sbjct: 343 KSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAR 384
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC----GSISLSKQVF 274
F+ +L+ V A+H+ K G + N L+ YAR G ++++F
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87
Query: 275 DKMTY--HDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQE 332
D + Y + +WNS+L YA G+ +A +F+ M + D+ ++ ++ + AG +
Sbjct: 88 DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMP-ERDAVSWTVMVVGLNRAGRFWD 146
Query: 333 GNKVFHSMLENHGVVP 348
K F M+ G+ P
Sbjct: 147 AVKTFLDMV-GEGLAP 161
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/558 (39%), Positives = 319/558 (57%), Gaps = 27/558 (4%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL- 100
+ V L++MYAK L AR +FD M RN VSW+A+I GY +E LF ++
Sbjct: 245 VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMIL 304
Query: 101 -QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
P +L SVL +C D G+ +H +K + + N L++MY+K D
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVID 364
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A + F+ M ++ +S++++++ + N AL +FR +Q G+ P
Sbjct: 365 DAIRFFDEMNPKDSVSFSAIVSGC-------------VQNGNAAVALSIFRMMQLSGIDP 411
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T VL AC+ L +H H + GF DT+I NALI Y++CG IS +++VF
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
++M HD+VSWN+++ Y +HG EAL LF ++ ++PD TF+ LLS+CSH+GLV
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 531
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F +M + +VP+++H CMVD+LGR G I EA IR MP EPD IWS LL +
Sbjct: 532 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR H L E + K++ L P + FV +SNIY +G ++ A IR K ++K P
Sbjct: 592 CRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIP 651
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SWIEI VH F G + H Q I +KLEEL+ ++K +GY E S D+EEE KE
Sbjct: 652 GCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKE 711
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L +HSEKLA+ F I+N + I + KN+R+C DCH +K + + +EI VRD
Sbjct: 712 QILLYHSEKLAIAFGILNL----KAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRD 767
Query: 572 SNRFHHFKDRICSCNDYW 589
+NRFHHFK+ C+C D+W
Sbjct: 768 ANRFHHFKNGTCNCGDFW 785
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 203/418 (48%), Gaps = 28/418 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L AC ++ +A ++H+H + N N D V + L +Y + AR LFDE
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSN--ADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HG 122
+P +V+ W +I YA +G + L+ S+L PN+++ VL +C L G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H+ A F L++ V+V AL++ Y+K EA ++F +M R+V++WN+MIA C
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG---C 185
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L ++A+ L Q+Q EG+ P+ T VL H A+H
Sbjct: 186 SLYGLC----------DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGY 235
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ F++ V+ L+ YA+C + ++++FD M + VSW++++ Y KEA
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEA 295
Query: 302 LQLFSNMNVQ----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
L+LF M ++ P T S+L AC+ + G K+ H + G V + ++
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL-HCYIIKLGSVLDILLGNTLL 354
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+ + G I +A + EM DSV +S ++ C ++G +A L+ ++ QL D
Sbjct: 355 SMYAKCGVIDDAIRFFDEMN-PKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQLSGID 410
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/611 (37%), Positives = 343/611 (56%), Gaps = 51/611 (8%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
H QI+A LF HG L H I NF L YA G LD +
Sbjct: 45 HLLQIHAVLFR----HG-------LDHHPILNFK-----------LQRSYASLGRLDYSV 82
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH 121
LF +V WTA+I G+A G E+ + +L Q PN F+ +S+L C
Sbjct: 83 ALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEP 142
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF-R 179
GK +H+ A+K D+ +YV L+++Y++ A ++F+ M ++++S +M+ + +
Sbjct: 143 GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAK 202
Query: 180 ACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSI 221
+L+A + LF M+ + EAL LFR++ + P+ T
Sbjct: 203 HGELDAARV-LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLS 261
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
VL AC L VHS I G + + + AL+ Y++CGS+ ++ VFDK+ D
Sbjct: 262 VLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKD 321
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+V+WNS++ YA+HG ++EALQLF +M + P + TF+ +LSAC H+G V EG +F+
Sbjct: 322 VVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 381
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
M + +G+ P+++HY CMV+LLGR G + +A +L++ M +EPD V+W LLG+CR HG+
Sbjct: 382 KMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 441
Query: 399 RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
L E L +S ++ +SNIY G+++ +R MK S V+K PG S IE+
Sbjct: 442 ALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEV 501
Query: 459 ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHS 518
N+VHEF +GG HP+R+ I+ LEE+ G LK GY P+T + LHDI E KE L HS
Sbjct: 502 NNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHS 561
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
EKLA+ F ++N + + I+I+KN+R+C DCH KL S + G++IVVRD NRFHHF
Sbjct: 562 EKLAIAFGLIN----TQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHF 617
Query: 579 KDRICSCNDYW 589
+ CSC DYW
Sbjct: 618 VNGSCSCGDYW 628
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
T H +H+++ ++G + ++ L +YA G + S +F + + W +I+
Sbjct: 42 TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
+AL G ++AL ++ M V+P++ TF S+L C E K HS G
Sbjct: 102 GHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP-----IEPGKALHSQAVKLGFD 156
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
L ++D+ R G ++ A++L MP E V + +L KHGE A +
Sbjct: 157 SDLYVRTGLLDVYARGGDVVSAQQLFDTMP-EKSLVSLTAMLTCYAKHGELDAARVL--- 212
Query: 408 LKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
+E D + + M + Y +G N+A ++ + M ++ +
Sbjct: 213 FDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 253
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/603 (37%), Positives = 337/603 (55%), Gaps = 39/603 (6%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
L A +G I++A L E DL N L+ + + L DAR LFD+MP
Sbjct: 179 LLAAYVHNGRIEEACLLFE------SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPV 232
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALAL 130
R+ +SW +ISGYAQ G + RLF P + Y+ ++
Sbjct: 233 RDAISWNTMISGYAQGGGLSQARRLFDE-----SPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 131 KFS--LDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF--------- 178
F + + NA+I Y ++ D A ++FE+M RN+ SWN+MI +
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQA 347
Query: 179 ---------RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
R C A I +A+ + EEAL +F +++++G + + TF L CA +
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+H K G+ + NAL+ Y +CGSI + F+ + D+VSWN++L
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA HG ++AL +F +M V+PD T V +LSACSH GL+ G + F+SM +++GV
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
+P HY CM+DLLGR GR+ EA+ LIR MP +P + W LLG+ R HG T L E AA
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
+ ++EP +S +V +SN+Y SG + A +R +M+ V+K PG SW+E++N++H F+
Sbjct: 588 MVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFS 647
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
G HP++E I+ LEEL +++ GYV T L LHD+EEE KE L +HSEKLA+ F
Sbjct: 648 VGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFG 707
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
I+ ++ R IR+MKN+R+C DCH+ +K S ++G+ I++RDS+RFHHF + CSC
Sbjct: 708 IL---TIPGGRP-IRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCG 763
Query: 587 DYW 589
DYW
Sbjct: 764 DYW 766
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 179/400 (44%), Gaps = 52/400 (13%)
Query: 33 NNFPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEE 91
N F P+ DLF N ++ Y + L DAR LFD MP+++VVSW +L+SGYAQ+G +E
Sbjct: 101 NLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDE 160
Query: 92 CFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKF--SLDAHVYVANALINMY- 148
+F ++ P + S++ + Y+H + L F D + N L+ +
Sbjct: 161 AREVFDNM-----PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFV 215
Query: 149 -SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF--LFR 205
K D W +F+ M R+ ISWN+MI+ + +QA LF + + + +
Sbjct: 216 RKKKLGDARW-LFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVS 274
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA----------- 254
+ GM + TF + E++ + +++IA Y IA
Sbjct: 275 GYVQNGMLDEAKTFFDEMP-------EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRN 327
Query: 255 ----NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
N +I Y + G I+ +++ FD M D VSW +I+ YA G +EAL +F +
Sbjct: 328 ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387
Query: 311 QPDS---ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH-YACMVD-----LLG 361
+S ATF LS C+ ++ G ++ HG ++ + C V +
Sbjct: 388 DGESLNRATFGCALSTCADIAALELGKQI-------HGQAVKMGYGTGCFVGNALLAMYF 440
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ G I EA + E D V W+ +L +HG R A
Sbjct: 441 KCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHGFGRQA 479
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 59/264 (22%)
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
+ GL+ G + F+ M E + V P HY CM+DLLGRV R+ E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG+ R HG T L E AA ++ P +S G +M ++
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNS-GISKMRDV-------------------- 857
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K PG SW E++N++H F+ G +RE I G++ E L +
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI--------------GFLEELDLKMR-E 902
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
EE KE L + SE LA I+ + R V++ K + +C DC + +K S ++G+
Sbjct: 903 REEEKERTLKYLSENLAAALGILTI-PVGRPNRVMK--KRVYVCEDCRSAIKHMSKIVGR 959
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
I +RDS H F + ICSC +YW
Sbjct: 960 LITLRDS---HRFNESICSCGEYW 980
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 188/413 (45%), Gaps = 49/413 (11%)
Query: 15 CALH-GNIKQAMQLHEHMINNFPNEPQ----DLFVTNHLINMYAKFGYLDDARHLFDEMP 69
C ++ G+ + + E + NN N+P+ D+ N I+ + + G+ D A H+F+ MP
Sbjct: 19 CTINFGHTSTSTRRSESVTNN--NKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMP 76
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALA 129
+R+ VS+ A+ISGY ++ F L +L + +V+++ + +L A
Sbjct: 77 RRSSVSYNAMISGYLRNSK----FNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARR 132
Query: 130 LKFSL--DAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
L F L + V N+L++ Y+++ DEA +VF+NM +N ISWN ++AA
Sbjct: 133 L-FDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAA--------- 182
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAK 244
+ EEA LF DW ++ C G V ++ L K
Sbjct: 183 ----YVHNGRIEEACLLFES------KSDW---DLISWNCLMGGFVRKKKLGDARWLFDK 229
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
D + N +I YA+ G +S ++++FD+ D+ +W +++ Y +G EA
Sbjct: 230 MPVR-DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTF 288
Query: 305 FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
F M + + ++ ++++ + ++F SM + + M+ G++G
Sbjct: 289 FDEM-PEKNEVSYNAMIAGYVQTKKMDIARELFESM-----PCRNISSWNTMITGYGQIG 342
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
I +A K MP + D V W+ ++ + G A ++KQ G+SL
Sbjct: 343 DIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ--DGESL 392
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 333/575 (57%), Gaps = 35/575 (6%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYF 103
N ++++ G +D A LF+ MP R++VSW A+I+GY Q+G + +LF +L
Sbjct: 128 NAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 187
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWK 158
P+EF++ SVL +C L GK VHA L+ + + V NALI+ Y+KS + E A +
Sbjct: 188 APDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARR 247
Query: 159 VFE-NMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------ 198
+ + +ME NVIS+ +++ + A E+F M N +
Sbjct: 248 IMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND 307
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EA+ LFR + G P+ T + VL CA L + +H + E + ++NA+I
Sbjct: 308 EAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAII 367
Query: 259 HAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
YAR GS ++++FD++ + + ++W S++ A A HGQ +EA+ LF M V+PD
Sbjct: 368 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 427
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T+V +LSACSHAG V EG + + + H + P++ HYACMVDLL R G EA++ IR
Sbjct: 428 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 487
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
MP+EPD++ W LL +CR H LAELAA KL ++P +S + ++N+Y G ++
Sbjct: 488 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 547
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
A I K K VRK G SW I +++H F + HPQR+A++ + ++KG G+
Sbjct: 548 AARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGF 607
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
VP+ LHD+++E KEE L HSEKLA+ F +++ E++ +R+MKN+R+C DCH
Sbjct: 608 VPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTP----EKTTLRVMKNLRVCNDCHA 663
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K S + +EI+VRD+ RFHHF+D +CSC DYW
Sbjct: 664 AIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 193/425 (45%), Gaps = 96/425 (22%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFS 109
M+AK G L DAR +F EMP+R+ VSWT ++ G + G E + + F P +F+
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 110 LASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD----------- 154
L +VL SC G+ VH+ +K L + V VAN+++NMY K C D
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK-CGDSETATTVFERM 119
Query: 155 -----EAW-----------------KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+W +FE+M R+++SWN+MIA + L+A+A++LF+
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+M L MAPD T + VL ACA L R VH+ I + ++
Sbjct: 180 RM------------LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQ 227
Query: 253 IANALIHAYARCGSISLSKQVFDK---------------------------------MTY 279
+ NALI YA+ GS+ ++++ D+ M
Sbjct: 228 VTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNN 287
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D+V+W +++ Y +G+ EA+ LF +M +P+S T ++LS C+ + G ++
Sbjct: 288 RDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQI 347
Query: 337 ----FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
S+LE V ++ + R G A ++ ++ +++ W+ ++ +
Sbjct: 348 HCRAIRSLLEQSSSVSN-----AIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVAL 402
Query: 393 RKHGE 397
+HG+
Sbjct: 403 AQHGQ 407
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 180/380 (47%), Gaps = 65/380 (17%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE-- 67
++ ACA GN++ Q+H +++ + VTN LI+ YAK G +++AR + D+
Sbjct: 196 SVLSACANLGNVRIGKQVHAYILRT--EMAYNSQVTNALISTYAKSGSVENARRIMDQSM 253
Query: 68 -------------------------------MPKRNVVSWTALISGYAQHGNAEECFRLF 96
M R+VV+WTA+I GY Q+G +E LF
Sbjct: 254 ETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLF 313
Query: 97 CSLLQYFF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS 151
S++ PN ++LA+VL C L +GK +H A++ L+ V+NA+I MY++S
Sbjct: 314 RSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARS 373
Query: 152 CA-DEAWKVFENMEFRN-VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+ A ++F+ + +R I+W SMI A A+ EEA+ LF ++ R
Sbjct: 374 GSFPWARRMFDQVCWRKETITWTSMIVA-------------LAQHGQGEEAVGLFEEMLR 420
Query: 210 EGMAPDWCTFSIVLKAC--AGLVTE--RHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
G+ PD T+ VL AC AG V E R+ + + ++ + ++ AR G
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN---EHQIAPEMSHYACMVDLLARAG 477
Query: 266 SISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEA-LQLFSNMNVQP-DSATFVSLLS 322
S +++ +M D ++W S+L A +H A+ A L +++ P +S + ++ +
Sbjct: 478 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 537
Query: 323 ACSHAGLVQEGNKVFHSMLE 342
S G + +++ + E
Sbjct: 538 VYSACGRWSDAARIWKARKE 557
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A + CA + Q+H I + Q V+N +I MYA+ G AR +FD++
Sbjct: 329 AAVLSVCASLACLDYGKQIHCRAIRSLLE--QSSSVSNAIITMYARSGSFPWARRMFDQV 386
Query: 69 P-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
++ ++WT++I AQHG EE LF +L+ P+ + VL +C +
Sbjct: 387 CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSH 439
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/585 (37%), Positives = 335/585 (57%), Gaps = 37/585 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y C +++ Q+H M+ L++ L+ MYA+ G L+DAR++ D
Sbjct: 38 YDDAITECVERRALREGRQVHARMVA--AGYRPALYLATRLVIMYARCGALEDARNVLDG 95
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
MP+RNVVSWTA+ISGY+Q+ ++ + LF +L+ K VHA
Sbjct: 96 MPERNVVSWTAMISGYSQNERPDQAWELFIMMLR---------------AGIHQVKQVHA 140
Query: 128 LALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
A+K + + H++V ++L++MY+KS EA +VF+ + R+V+S+ ++++ + L+
Sbjct: 141 FAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLD-- 198
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
EEAL LFR L EGM + TF+ +L A +GL + + VH LI +
Sbjct: 199 -----------EEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRE 247
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
+ N+LI Y++CG + S++VFD M +VSWN++L Y HG A E +QLF
Sbjct: 248 LPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFR 307
Query: 307 NM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
+M V+PDS T +++LS SH GLV EG +F +++ + +HY C++DLLGR G
Sbjct: 308 SMCDEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSG 367
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
++ +A LI +MP +P IW LLG+CR H + E A KL +EP ++ +V +SN
Sbjct: 368 QLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSN 427
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
IY +G + +RK M V K PG SW+ ++ +H F S + HP++E I K++E
Sbjct: 428 IYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKE 487
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
+ +K G+VP+ S LHD+++E KE L HSEKLA+ F +M+ S I++MK
Sbjct: 488 IYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPS----DLTIQVMK 543
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N+RICVDCHNF K S + G+EI +RD NRFH + C+C DYW
Sbjct: 544 NLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 339/599 (56%), Gaps = 30/599 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ Q L + A ++ A+ +H+ +++ QD F+ LINM+++ +D+AR
Sbjct: 68 TQQTCELLILSAARRNSLSDALDVHQLLVDG--GFDQDPFLATKLINMFSELDTVDNARK 125
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----- 117
+FD+ KR + W AL A G + L+ + + + F+ +L +C
Sbjct: 126 VFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASEC 185
Query: 118 --DYLH-GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
+L GK +HA L+ AHV+V L++MY++ C A VF+ M +NV+SW++
Sbjct: 186 LVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSA 245
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MIA + +A+ELF +M L P+ T VL+ACA
Sbjct: 246 MIACYAKNGKPYEALELFREM-----------MLNTHDSVPNSVTMVSVLQACAAFAALE 294
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H+ I + G + + +ALI YARCG + + +FD+M D+V WNS++ +Y
Sbjct: 295 QGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYG 354
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
LHG ++A+++F M P +F+S+L ACSH GLV+EG K+F SM++ HG+ P +
Sbjct: 355 LHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSV 414
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HYACMVDLLGR R+ EA K+I ++ +EP +W LLG+CR H LAE A+ +L +
Sbjct: 415 EHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFK 474
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP ++ +V +++IY + +++ + ++K + ++K PG SWIE+ +++ F S +
Sbjct: 475 LEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDE 534
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+PQ E + L L ++K GY P+T L L+D+++E KE + HSEKLA+ F ++N
Sbjct: 535 FNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINT 594
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH+ K S +EI+VRD NRFHHFKD +CSC DYW
Sbjct: 595 S----KGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 13/217 (5%)
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I+ K N ++AL+L P T +++ + A + A VH L+ GF
Sbjct: 45 IQSLCKQGNLKQALYLLSHESN----PTQQTCELLILSAARRNSLSDALDVHQLLVDGGF 100
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ D +A LI+ ++ ++ +++VFDK + WN++ +A AL G+ + L+L+
Sbjct: 101 DQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPR 160
Query: 308 MN---VQPDSATFVSLLSACSHA----GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
MN V D T+ LL AC + +Q+G ++ H+ + HG + ++D+
Sbjct: 161 MNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEI-HAHILRHGYGAHVHVMTTLMDMY 219
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
R G + A + EMP++ + V WS ++ K+G+
Sbjct: 220 ARFGCVSYASAVFDEMPVK-NVVSWSAMIACYAKNGK 255
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/568 (39%), Positives = 328/568 (57%), Gaps = 29/568 (5%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFF 104
HLIN+Y+ F D AR +FD P + + W ++I Y + E ++ C + +
Sbjct: 87 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGL 146
Query: 105 PNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMYSKSCADE--AWKVFE 161
+ + + L+ G L A + + VA NA+I S+S D A +VF+
Sbjct: 147 ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS-EDPYVARRVFD 205
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK-----------------NEEEALFLF 204
M ++ +SW +M+A + + +ELF KMK + +EA+ F
Sbjct: 206 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSF 265
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
Q++ E P+ TF VL A A L R A H+ I + GF +T++ N+LI YA+C
Sbjct: 266 HQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKC 325
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLL 321
G + S+++F++M + D VSWN++L YA+HG A+ LFS M VQ DS +FVS+L
Sbjct: 326 GQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVL 385
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
SAC HAGLV+EG K+FHSM + + + P L+HYACMVDLLGR G E I+ MP+EPD
Sbjct: 386 SACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPD 445
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
+ +W LLGSCR H +L E+A L +LEP + FV +S+IY SG + A R +
Sbjct: 446 AGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSK 505
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
M ++K PG SW+E++N+VH F G K HPQ E++ L+ +++ +GYVP+ S
Sbjct: 506 MNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCV 565
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
L ++EEE KE LY HSE+LA+ FA++N S I+I+KN+R+C DCH K S
Sbjct: 566 LQNVEEEDKEMFLYSHSERLAITFALLNTP----PGSTIQIVKNLRVCADCHTTTKFISK 621
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + I+VRD+ RFHHF+D ICSCNDYW
Sbjct: 622 ITTRRIIVRDATRFHHFEDGICSCNDYW 649
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 322/559 (57%), Gaps = 26/559 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+ V LI MY G ++ AR +FD M R+VVSWT +I GYA++GN E+ F LF ++
Sbjct: 292 DDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATM 351
Query: 100 LQYFF-PNEFSLASVL----ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
+ P+ + ++ IS + H + +H+ + V+ AL++MY+K A
Sbjct: 352 QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAI 411
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A +VF+ M R+V+SW++MI A+ +A E F MK R +
Sbjct: 412 KDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMK-------------RSNIE 458
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T+ +L AC L +++ K + NALI A+ GS+ ++ +
Sbjct: 459 PDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYI 518
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD M D+++WN+++ Y+LHG A+EAL LF M +P+S TFV +LSACS AG V
Sbjct: 519 FDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFV 578
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG + F +LE G+VP + Y CMVDLLGR G + EAE LI+ MP++P S IWS LL
Sbjct: 579 DEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLV 638
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR HG +AE AA + ++P D +VQ+S++Y +G + +RK M+ +RK
Sbjct: 639 ACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKE 698
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G +WIE+ +VH F + HP I+ +L L+ +K GY+P T LHD+ E+ K
Sbjct: 699 QGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQK 758
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE + +HSEKLA+ + +++ S + IRI KN+R+C DCH+ K S + G+EI+ R
Sbjct: 759 EEAISYHSEKLAIAYGVLSLPS----GTPIRIYKNLRVCSDCHSASKFISKVTGREIIAR 814
Query: 571 DSNRFHHFKDRICSCNDYW 589
D++RFHHFKD +CSC DYW
Sbjct: 815 DASRFHHFKDGVCSCGDYW 833
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 214/431 (49%), Gaps = 29/431 (6%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
++ Y LF C + Q+ +H+I +++ N LI +Y+ G + +AR +
Sbjct: 57 SRTYVKLFQRCTELRDAALGKQVRDHIIQG--GRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-- 121
FD + + VV+W ALI+GYAQ G+ +E F LF ++ + P+ + SVL +C
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
GK VHA + + + AL++MY K + D+A +VF+ + R+V ++N M+
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGG- 233
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+AK + E+A LF ++Q+ G+ P+ +F +L C AV
Sbjct: 234 ------------YAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAV 281
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ G DD +A +LI Y CGSI +++VFD M D+VSW +++ YA +G
Sbjct: 282 HAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNI 341
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++A LF+ M +QPD T++ +++AC+ + + ++ HS ++ G L
Sbjct: 342 EDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREI-HSQVDIAGFGTDLLVSTA 400
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC--RKHGETRLAELAATKLKQLEP 413
+V + + G I +A ++ MP D V WS ++G+ +G K +EP
Sbjct: 401 LVHMYAKCGAIKDARQVFDAMPRR-DVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEP 459
Query: 414 GDSLGFVQMSN 424
D + ++ + N
Sbjct: 460 -DGVTYINLLN 469
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 163/332 (49%), Gaps = 24/332 (7%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
D GK V ++ ++Y N LI +YS C + EA ++F+++E + V++WN++I
Sbjct: 72 DAALGKQVRDHIIQGGRQLNIYELNTLIKLYS-ICGNVTEARQIFDSVENKTVVTWNALI 130
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A + A++ + +EA LFRQ+ EG+ P TF VL AC+
Sbjct: 131 AGY-------------AQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWG 177
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VH+ + GF D I AL+ Y + GS+ ++QVFD + D+ ++N ++ YA
Sbjct: 178 KEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKS 237
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G ++A +LF M ++P+ +F+S+L C + G K H+ N G+V +
Sbjct: 238 GDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWG-KAVHAQCMNAGLVDDIRV 296
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQ 410
++ + G I A ++ M + D V W+V++ ++G E A + +
Sbjct: 297 ATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENGNIEDAFGLFATMQEEG 355
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
++P D + ++ + N +S + N AR I ++
Sbjct: 356 IQP-DRITYMHIMNACAISANLNHAREIHSQV 386
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+ ++L G D T+ + + C L V I + G + + N LI Y+
Sbjct: 44 VLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYS 103
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
CG+++ ++Q+FD + +V+WN+++ YA G KEA LF M ++P TF+S
Sbjct: 104 ICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLS 163
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+L ACS + G +V H+ + G V +V + + G + +A ++ + +
Sbjct: 164 VLDACSSPAGLNWGKEV-HAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222
Query: 380 PDSVIWSVLLGSCRKHGE 397
D ++V++G K G+
Sbjct: 223 -DVSTFNVMVGGYAKSGD 239
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/649 (35%), Positives = 346/649 (53%), Gaps = 70/649 (10%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+++ T+ CA ++ Q+H + D V + L++MY +F +L DAR++
Sbjct: 74 SRVLPTVIKTCAALSALQTGKQMHCFAL--VSGLGLDSVVLSSLLHMYVQFDHLKDARNV 131
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL------------------------- 99
FD++P+ VV+ +ALIS +A+ G +E LF
Sbjct: 132 FDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSY 191
Query: 100 -----------LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANAL 144
L+ P+ S++SVL + L G +H +K L +V +AL
Sbjct: 192 LDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSAL 251
Query: 145 INMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE----- 198
I+MY K +CA E VF M+ +V + N+++ L A+E+F + K +
Sbjct: 252 IDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVS 311
Query: 199 ---------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
EAL LFR++Q EG+ P+ T +L AC + H A H
Sbjct: 312 WTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSL 371
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G +D + +ALI YA+CG + S+ FD M +LVSWNS++ YA+HG+ EA+
Sbjct: 372 RNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAIN 431
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
+F M +PD +F +LSAC+ GL +EG F SM NHGV +++HY+CMV LL
Sbjct: 432 IFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLL 491
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR GR+ EA +I++MP EPDS +W LL SCR H L E+AA ++ +LEP + ++
Sbjct: 492 GRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYI 551
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SNIY + + ++R M+ ++K PG SWIEI+N+VH +G HPQ I +
Sbjct: 552 LLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIE 611
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
KL +L ++K GYVP T L D+EE+ KE+ L HSEKLA+V ++N + +
Sbjct: 612 KLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNT----KPGFPL 667
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+++KN+RIC DCH +K SD +EI VRD+NRFH FK +CSC DYW
Sbjct: 668 QVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 106/217 (48%), Gaps = 12/217 (5%)
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ I++F+K+ + + +F + +G+ PD V+K CA L + +H
Sbjct: 44 ETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVS 103
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G D+V+ ++L+H Y + + ++ VFDK+ +V+ ++++ +A G+ KE +LF
Sbjct: 104 GLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELF 163
Query: 306 ---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSM-LENHGVVPQLDHYACMVDLLG 361
++ V+ + ++ ++S + +G + +F +M LE G+ P + ++ +G
Sbjct: 164 YQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLE--GLKPDGTSVSSVLPAVG 221
Query: 362 RVGRILEAEKL---IREMPMEPDSVIWSVLL---GSC 392
+ L ++ + + + PD + S L+ G C
Sbjct: 222 DLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKC 258
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/624 (34%), Positives = 353/624 (56%), Gaps = 63/624 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++TL + G +K Q+H H++ F + +FV + L++MY+K G + AR +FD
Sbjct: 146 FSTLLILASKRGCVKLGRQIHGHVVKFGFMSY---VFVGSPLVDMYSKMGMISCARKVFD 202
Query: 67 EMPKRNVV-------------------------------SWTALISGYAQHGNAEECFRL 95
E+P++NVV SWT++I+G+ Q+G + +
Sbjct: 203 ELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDI 262
Query: 96 FCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK 150
F + L+ ++++ SVL +C + GK VHA ++ +++VA+AL++MY K
Sbjct: 263 FREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCK 322
Query: 151 SCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
C + A VF+ M +NV+SW +M+ + + EEA+ F +Q
Sbjct: 323 -CKNIKSAEAVFKKMTCKNVVSWTAMLVGY-------------GQNGYSEEAVKTFSDMQ 368
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ G+ PD T V+ +CA L + + H+ G ++NAL+ Y +CGSI
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 428
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
S ++F+++++ D V+W +++ YA G+A E + LF +M ++PD TF+ +LSACS
Sbjct: 429 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 488
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
AGLV++GN++F SM+ HG+VP DHY CM+DL R GRI EA I +MP PD++ W
Sbjct: 489 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 548
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
+ LL SCR +G + + AA L +L+P ++ +V +S++Y G + + +RK+M+
Sbjct: 549 ATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDK 608
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
+RK PG SWI+ +N+VH F++ K +P + I+ +LE+L ++ GYVP+ + LHD+
Sbjct: 609 GLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDV 668
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+ K + L HHSEKLA+ F ++ IR++KN+R+C DCHN K S + +
Sbjct: 669 GDSEKIKMLNHHSEKLAIAFGLL----FIPPGLPIRVVKNLRVCSDCHNATKYISKITNR 724
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI+VRD+ RFH FKD CSC D+W
Sbjct: 725 EILVRDTARFHLFKDGTCSCGDFW 748
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 224/452 (49%), Gaps = 68/452 (15%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQ--------------------------- 40
Y L C N +A LH H+I P
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 41 --DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
+L+ N +++ Y+K G + + +LFD MP+R+ VSW +LISGYA G + + +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 99 LLQ---YFFPNEFSLASVLI-----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSK 150
+L+ F N + +++LI C L G+ +H +KF ++V+V + L++MYSK
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKL-GRQIHGHVVKFGFMSYVFVGSPLVDMYSK 190
Query: 151 ----SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN---------- 196
SCA KVF+ + +NV+ +N++I C + LF +M+
Sbjct: 191 MGMISCAR---KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 197 --------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
+ +A+ +FR+++ E + D TF VL AC G++ + VH+ I + ++
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
D+ +A+AL+ Y +C +I ++ VF KMT ++VSW ++L Y +G ++EA++ FS+M
Sbjct: 308 DNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDM 367
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
++PD T S++S+C++ ++EG + FH+ G++ + +V L G+ G
Sbjct: 368 QKYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGS 426
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
I ++ +L E+ + D V W+ L+ + G+
Sbjct: 427 IEDSHRLFNEISFK-DEVTWTALVSGYAQFGK 457
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/553 (40%), Positives = 320/553 (57%), Gaps = 28/553 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPN 106
LI Y G LDDAR LFDE+P ++VVSW A+ISGY Q G EE F + + PN
Sbjct: 203 LITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPN 262
Query: 107 EFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFE 161
+ ++ VL +C + GK + + +++ + NALI+MY K D A ++F+
Sbjct: 263 KSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFD 322
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
+E ++VISWN+MI + L EEAL LF + R + P+ TF
Sbjct: 323 GIEEKDVISWNTMIGGYSYLSLY-------------EEALALFEVMLRSNVKPNDVTFLG 369
Query: 222 VLKACAGLVTERHASAVHSLIAK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L ACA L VH+ I K + + +LI YA+CG I +++VF M
Sbjct: 370 ILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR 429
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKV 336
+L SWN++L +A+HG A+ AL LFS M +PD TFV +LSAC+ AGLV G++
Sbjct: 430 NLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQY 489
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F SM++++G+ P+L HY CM+DLL R + EAE L++ M MEPD IW LL +C+ HG
Sbjct: 490 FRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
E A +L QLEP ++ FV +SNIY +G ++ IR + ++K PG + I
Sbjct: 550 RVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSI 609
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
EI+ VHEF G K HP+ I+K L E+ L+ G+VP TS L+D++EE KE L
Sbjct: 610 EIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQ 669
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+ F ++ + + IRI+KN+R+C +CH+ KL S + +EI+ RD NRFH
Sbjct: 670 HSEKLAISFGLIKT----KPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFH 725
Query: 577 HFKDRICSCNDYW 589
HFKD CSCND W
Sbjct: 726 HFKDGFCSCNDCW 738
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 201/460 (43%), Gaps = 66/460 (14%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA--KFGYLDDARHLF 65
Y L C NI Q+H +I N +FV + LI+ A G L A LF
Sbjct: 31 YLNLLEKCK---NINTFKQIHSLIIKTGLN--NTVFVQSKLIHFCAVSPSGDLSYALSLF 85
Query: 66 DEMP---KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL- 120
+E K NV W +LI GY+ + LF +L Y PN + + SC
Sbjct: 86 EENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAK 145
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMY----------------------------- 148
GK +HA ALK +L + +V ++I+MY
Sbjct: 146 ATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALIT 205
Query: 149 ---SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
S+ C D+A ++F+ + ++V+SWN+MI+ + + EEA+ F
Sbjct: 206 GYVSQGCLDDARRLFDEIPVKDVVSWNAMISG-------------YVQSGRFEEAIVCFY 252
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
++Q + P+ T +VL AC + + S + GF + + NALI Y +CG
Sbjct: 253 EMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCG 312
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+++++FD + D++SWN+++ Y+ +EAL LF M NV+P+ TF+ +L
Sbjct: 313 ETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILH 372
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC+ G + G V + +N + ++D+ + G I AE++ R M +
Sbjct: 373 ACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NL 431
Query: 383 VIWSVLLGSCRKHG--ETRLAELAATKLKQLEPGDSLGFV 420
W+ +L HG E LA + K L D + FV
Sbjct: 432 ASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFV 471
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/593 (35%), Positives = 341/593 (57%), Gaps = 30/593 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ C L G+ A+ +H + + + ++ +LFV N +I++Y K G L++ R +FD M
Sbjct: 174 SSVLPMCVLLGDRALALAMHLYAVKHGLDD--ELFVCNAMIDVYGKLGMLEEVRKVFDGM 231
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE----FSLASVLISC-DYLHGK 123
R++V+W ++ISG+ Q G +FC + + SLAS + C D G+
Sbjct: 232 SSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGR 291
Query: 124 LVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH ++ D + NA+++MY+K S + A ++F++M R+ +SWN++I +
Sbjct: 292 SVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQN 351
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L ++AI ++ M+ + EG+ P TF VL A + L + + +H+L
Sbjct: 352 GLASEAIHVYDHMQ------------KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHAL 399
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G D + +I YA+CG + + +F++ WN+++ +HG +A
Sbjct: 400 SIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKA 459
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L LFS M + PD TFVSLL+ACSHAGLV +G F+ M +G+ P HYACMVD
Sbjct: 460 LSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVD 519
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+ GR G++ +A IR MP++PDS IW LLG+CR HG + ++A+ L +L+P +
Sbjct: 520 MFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGY 579
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR--HPQRE 476
+V MSN+Y G ++ +R ++ ++K PG S IE++ V+ F SG + HPQ E
Sbjct: 580 YVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHE 639
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I ++L +L+ +++ +GYVP+ S L D+EE+ KE+ L +HSE+LA+ F I+N
Sbjct: 640 EIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINT----PP 695
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ + I KN+R+C DCHN K S + +EI+VRDSNRFHHFKD CSC D+W
Sbjct: 696 RTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 208/410 (50%), Gaps = 31/410 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D F + L++ Y +FG + DA FDEM R+V +W A++SG ++ A E LF +
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLV----HALALKFSLDAHVYVANALINMYSK-SCAD 154
++ + +++SVL C L + + H A+K LD ++V NA+I++Y K +
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
E KVF+ M R++++WNS+I+ A A+E+F M++ G++P
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRD-------------SGVSP 269
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE-DDTVIANALIHAYARCGSISLSKQV 273
D T + A A +VH + + G++ D + NA++ YA+ I ++++
Sbjct: 270 DVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRM 329
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGL 329
FD M D VSWN+++ Y +G A EA+ ++ +M ++P TFVS+L A SH G
Sbjct: 330 FDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGA 389
Query: 330 VQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
+Q+G ++ H++ G+ LD Y C++DL + G++ EA L + P +V
Sbjct: 390 LQQGTRM-HALSIKTGL--NLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAV 446
Query: 388 LLG-SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
+ G HG L+ + + + + P D + FV + +G ++ R
Sbjct: 447 ISGVGVHGHGAKALSLFSQMQQEGISP-DHVTFVSLLAACSHAGLVDQGR 495
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 138/277 (49%), Gaps = 19/277 (6%)
Query: 125 VHALALKFSL-DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA AL+ L + + AL++ Y + +A++ F+ M R+V +WN+M++
Sbjct: 90 LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNA 149
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A+A+ LF +M EG+A D T S VL C L A A+H
Sbjct: 150 RAAEAVGLFGRMV-------------MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYA 196
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K+G +D+ + NA+I Y + G + ++VFD M+ DLV+WNSI+ + GQ A+
Sbjct: 197 VKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAV 256
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
++F M V PD T +SL SA + G + G V M+ V + +VD+
Sbjct: 257 EMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDM 316
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ +I A+++ MP+ D+V W+ L+ ++G
Sbjct: 317 YAKLSKIEAAQRMFDSMPVR-DAVSWNTLITGYMQNG 352
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 336/593 (56%), Gaps = 35/593 (5%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
AC+ +I Q H+ D+FV++ LI MY+ G L+DAR +FDE+PKRN+
Sbjct: 85 ACSSLFDIFSGKQTHQQAF--VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLISCDYLHGK--- 123
VSWT++I GY +GNA + LF LL F + L SV+ +C + K
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 124 -LVHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFR 179
+H+ +K D V V N L++ Y+K A K+F+ + ++ +S+NS+++ +
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ +A E+F ++ + F + T S VL A + R +H
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTF------------NAITLSTVLLAVSHSGALRIGKCIH 310
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + G EDD ++ ++I Y +CG + +++ FD+M ++ SW +++ Y +HG A
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL+LF M V+P+ TFVS+L+ACSHAGL EG + F++M GV P L+HY CM
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCM 430
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + +A LI+ M M+PDS+IWS LL +CR H LAE++ +L +L+ +
Sbjct: 431 VDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNC 490
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ +S+IY +G + +R MK + K PG S +E+ VH F G + HPQRE
Sbjct: 491 GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I++ L EL +L GYV TS HD++EE KE L HSEKLA+ F IMN
Sbjct: 551 KIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT----VP 606
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + ++KN+R+C DCHN +KL S ++ +E VVRD+ RFHHFKD CSC DYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 171/346 (49%), Gaps = 31/346 (8%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
+ K +V SW ++I+ A+ G++ E F S+ + +P S + +C D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
K H A F + ++V++ALI MYS +C ++A KVF+ + RN++SW SMI +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYS-TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 181 CKLEAQAIELFAKM----KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A+ LF + ++++A+FL D V+ AC+ + +
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFL-----------DSMGLVSVISACSRVPAKGLTE 203
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARC--GSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
++HS + K GF+ + N L+ AYA+ G +++++++FD++ D VS+NSI+ YA
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 295 HGQAKEALQLF----SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
G + EA ++F N V ++ T ++L A SH+G ++ G K H + G+ +
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDV 322
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + GR+ A K M + W+ ++ HG
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/563 (39%), Positives = 329/563 (58%), Gaps = 31/563 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ LI YA G + AR +FD + +R+VVSW A+I+GY ++ EE LF +
Sbjct: 147 RDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEM 206
Query: 100 LQY-FFPNEFSLASVLISCDYLH----GKLVHALALKF-SLDAHVYVANALINMYSKSCA 153
++ P+E +L SVL +C G+ +H L + + + NA I +YSK C
Sbjct: 207 MRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSK-CG 265
Query: 154 DE--AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D A +FE + ++V+SWN++I + M +EAL LF+++ R G
Sbjct: 266 DVEIASGLFEGLSCKDVVSWNTLIGGY-------------THMNLYKEALLLFQEMLRSG 312
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISL 269
+P+ T VL ACA L +H I K G + + + +LI YA+CG I
Sbjct: 313 ESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEA 372
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ QVF+ M + L SWN+++ +A+HG+A A LFS M ++PD T V LLSACSH
Sbjct: 373 AHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSH 432
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+GL+ G +F S+ +++ + P+L+HY CM+DLLG G EAE++I MPMEPD VIW
Sbjct: 433 SGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWC 492
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL +C+ HG LAE A KL ++EP +S +V +SNIY +G + IR+ + G
Sbjct: 493 SLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKG 552
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
++K PG S IEI++ VHEF G K HPQ I++ LEE+ L+ G+VP+TS L ++E
Sbjct: 553 MKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEME 612
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE KE L HHSEKLA+ F +++ + + + ++KN+R+C +CH KL S + +E
Sbjct: 613 EEWKEGALRHHSEKLAIAFGLIST----KPGTKLTVVKNLRVCRNCHEATKLISKIYKRE 668
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
IV RD RFHHF+D +CSC DYW
Sbjct: 669 IVARDRTRFHHFRDGVCSCCDYW 691
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 190/420 (45%), Gaps = 35/420 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASV 113
F L A +F+ + N++ W ++ G A + ++ ++ PN ++ +
Sbjct: 30 FDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFL 89
Query: 114 LISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +HA +K + Y +LI+MY+++ ++A KVF+ R+V
Sbjct: 90 LKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDV 149
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQRE 210
+S ++I + + A ++F + EEAL LF+++ R
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRT 209
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK-YGFEDDTVIANALIHAYARCGSISL 269
+ PD T VL ACA + +H+L+ +GF I NA I Y++CG + +
Sbjct: 210 NVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEI 269
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ +F+ ++ D+VSWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 270 ASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 329
Query: 327 AGLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
G + G + H ++ GV ++D+ + G I A ++ M M
Sbjct: 330 LGAIDIG-RWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSS 387
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
W+ ++ HG A +++++ +EP D + V + + SG + R I K +
Sbjct: 388 WNAMIFGFAMHGRANAAFDLFSRMRKNGIEP-DDITLVGLLSACSHSGLLDLGRHIFKSV 446
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 333/575 (57%), Gaps = 35/575 (6%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYF 103
N ++++ G +D A LF+ MP R++VSW A+I+GY Q+G + +LF +L
Sbjct: 234 NAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 293
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWK 158
P+EF++ SVL +C L GK VHA L+ + + V NALI+ Y+KS + E A +
Sbjct: 294 APDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARR 353
Query: 159 VFE-NMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------ 198
+ + +ME NVIS+ +++ + A E+F M N +
Sbjct: 354 IMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND 413
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EA+ LFR + G P+ T + VL CA L + +H + E + ++NA+I
Sbjct: 414 EAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAII 473
Query: 259 HAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
YAR GS ++++FD++ + + ++W S++ A A HGQ +EA+ LF M V+PD
Sbjct: 474 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 533
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T+V +LSACSHAG V EG + + + H + P++ HYACMVDLL R G EA++ IR
Sbjct: 534 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 593
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
MP+EPD++ W LL +CR H LAELAA KL ++P +S + ++N+Y G ++
Sbjct: 594 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 653
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
A I K K VRK G SW I +++H F + HPQR+A++ + ++KG G+
Sbjct: 654 AARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGF 713
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
VP+ LHD+++E KEE L HSEKLA+ F +++ E++ +R+MKN+R+C DCH
Sbjct: 714 VPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTP----EKTTLRVMKNLRVCNDCHA 769
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K S + +EI+VRD+ RFHHF+D +CSC DYW
Sbjct: 770 AIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 210/457 (45%), Gaps = 100/457 (21%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G ++ A +L + + P +++F N L++M+AK G L DAR +F EMP+R+ VSWT
Sbjct: 79 GGLRDARRLFDEI----PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTV 134
Query: 79 LISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFS 133
++ G + G E + + F P +F+L +VL SC G+ VH+ +K
Sbjct: 135 MVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG 194
Query: 134 LDAHVYVANALINMYSKSCAD----------------EAW-----------------KVF 160
L + V VAN+++NMY K C D +W +F
Sbjct: 195 LGSCVPVANSVLNMYGK-CGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLF 253
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E+M R+++SWN+MIA + L+A+A++LF++M L MAPD T +
Sbjct: 254 ESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM------------LHESSMAPDEFTIT 301
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK---- 276
VL ACA L R VH+ I + ++ + NALI YA+ GS+ ++++ D+
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMET 361
Query: 277 -----------------------------MTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
M D+V+W +++ Y +G+ EA+ LF +
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKV----FHSMLENHGVVPQLDHYACMVDLL 360
M +P+S T ++LS C+ + G ++ S+LE V ++ +
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN-----AIITMY 476
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
R G A ++ ++ +++ W+ ++ + +HG+
Sbjct: 477 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQ 513
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 180/380 (47%), Gaps = 65/380 (17%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE-- 67
++ ACA GN++ Q+H +++ + VTN LI+ YAK G +++AR + D+
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRT--EMAYNSQVTNALISTYAKSGSVENARRIMDQSM 359
Query: 68 -------------------------------MPKRNVVSWTALISGYAQHGNAEECFRLF 96
M R+VV+WTA+I GY Q+G +E LF
Sbjct: 360 ETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLF 419
Query: 97 CSLLQYFF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS 151
S++ PN ++LA+VL C L +GK +H A++ L+ V+NA+I MY++S
Sbjct: 420 RSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARS 479
Query: 152 CA-DEAWKVFENMEFRN-VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+ A ++F+ + +R I+W SMI A A+ EEA+ LF ++ R
Sbjct: 480 GSFPWARRMFDQVCWRKETITWTSMIVA-------------LAQHGQGEEAVGLFEEMLR 526
Query: 210 EGMAPDWCTFSIVLKAC--AGLVTE--RHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
G+ PD T+ VL AC AG V E R+ + + ++ + ++ AR G
Sbjct: 527 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN---EHQIAPEMSHYACMVDLLARAG 583
Query: 266 SISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEA-LQLFSNMNVQP-DSATFVSLLS 322
S +++ +M D ++W S+L A +H A+ A L +++ P +S + ++ +
Sbjct: 584 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 643
Query: 323 ACSHAGLVQEGNKVFHSMLE 342
S G + +++ + E
Sbjct: 644 VYSACGRWSDAARIWKARKE 663
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 122/275 (44%), Gaps = 60/275 (21%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD-----EAWKVFENMEF--RNVISWNSM 174
G+ +HA A+K L A Y+ N L++ Y ++ +A ++F+ + RNV +WNS+
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 175 IAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDW 216
++ F A A +FA+M + EA+ + +G P
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS---------- 266
T + VL +CA VHS + K G +AN++++ Y +CG
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 224
Query: 267 ---------------------ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
+ L++ +F+ M +VSWN+++ Y +G +AL+LF
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 306 SNM----NVQPDSATFVSLLSACSHAGLVQEGNKV 336
S M ++ PD T S+LSAC++ G V+ G +V
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQV 319
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A + CA + Q+H I + + V+N +I MYA+ G AR +FD++
Sbjct: 435 AAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS--VSNAIITMYARSGSFPWARRMFDQV 492
Query: 69 P-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
++ ++WT++I AQHG EE LF +L+ P+ + VL +C +
Sbjct: 493 CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSH 545
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 328/556 (58%), Gaps = 24/556 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSL 99
D V L+ +K +DDA LF M + +NVVSWTA+ISG Q+G ++ LF +
Sbjct: 329 DQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQM 388
Query: 100 LQYFF-PNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
+ PN F+ +++L + +HA +K + + V AL++ Y K +A
Sbjct: 389 RREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAV 448
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
KVFE +E +++++W++M+A + A+ EEA LF QL +EG+ P+
Sbjct: 449 KVFEIIEAKDLMAWSAMLAGY-------------AQTGETEEAAKLFHQLIKEGIKPNEF 495
Query: 218 TFSIVLKACAG-LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TFS V+ ACA H+ K + +++AL+ YA+ G+I + +VF +
Sbjct: 496 TFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKR 555
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
DLVSWNS++ Y+ HGQAK+AL++F M N+ D+ TF+ +++AC+HAGLV++G
Sbjct: 556 QKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKG 615
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K F+SM+ +H + P + HY+CM+DL R G + +A +I EMP P + +W LLG+ R
Sbjct: 616 QKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAAR 675
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H L ELAA KL L+P DS +V +SN+Y +G++ + +RK M +V+K PG
Sbjct: 676 VHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGY 735
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWIE++N+ + F +G HP I+ KL EL +LK GY P+T HDIE+E KE
Sbjct: 736 SWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETI 795
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HHSE+LA+ F ++ I+I+KN+R+C DCHNF KL S + + IVVRDSN
Sbjct: 796 LSHHSERLAIAFGLI----ATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSN 851
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFKD +CSC DYW
Sbjct: 852 RFHHFKDGLCSCGDYW 867
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 189/369 (51%), Gaps = 31/369 (8%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY- 102
V L++MY K ++D R +FDEM +RNVVSWT+L++GY+ +G + LFC +QY
Sbjct: 130 VGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQ-MQYE 188
Query: 103 -FFPNEFSLASV---LISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
PN +++++V L++ + G VHA+ +K + + V N+LI++YS+ +A
Sbjct: 189 GVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDA 248
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
VF+ ME R+ ++WNSMIA + Q +E+F +F ++Q G+ P
Sbjct: 249 RDVFDKMEIRDWVTWNSMIAGYVR---NGQDLEVFE----------IFNKMQLAGVKPTH 295
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TF+ V+K+CA L + K GF D ++ AL+ A ++C + + +F
Sbjct: 296 MTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSL 355
Query: 277 MTY-HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
M ++VSW +++ +G +A+ LFS M V+P+ T+ ++L+ + +
Sbjct: 356 MEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEM 415
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+V + E V ++D ++G ++A K+ E+ D + WS +L
Sbjct: 416 HAEVIKTNYERSSSVG-----TALLDAYVKLGNTIDAVKVF-EIIEAKDLMAWSAMLAGY 469
Query: 393 RKHGETRLA 401
+ GET A
Sbjct: 470 AQTGETEEA 478
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 169/347 (48%), Gaps = 25/347 (7%)
Query: 61 ARHLFDEMPKRNVV--SWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC 117
A +LFD++P R L+ Y++ +E LF SLL P+E +L+ V C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 118 -DYLHGKL---VHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWN 172
L GKL VH +KF L HV V +L++MY K+ ++ +VF+ M RNV+SW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
S++A + L ELF Q+Q EG+ P+ T S V+ A
Sbjct: 164 SLLAGYSWNGLYGYVWELFC-------------QMQYEGVLPNRYTVSTVIAALVNEGVV 210
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH+++ K+GFE+ + N+LI Y+R G + ++ VFDKM D V+WNS++ Y
Sbjct: 211 GIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGY 270
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+GQ E ++F+ M V+P TF S++ +C+ + + L++ Q
Sbjct: 271 VRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQ 330
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ A MV L + + +A L M + V W+ ++ C ++G
Sbjct: 331 IVITALMV-ALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNG 376
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%), Gaps = 5/210 (2%)
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
+++ K +EAL LF L + PD T S V CAG + + VH K+G D
Sbjct: 68 YSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDH 127
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
+ +L+ Y + +++ ++VFD+M ++VSW S+L Y+ +G +LF M
Sbjct: 128 VSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQY 187
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
V P+ T ++++A + G+V G +V H+M+ HG + + ++ L R+G +
Sbjct: 188 EGVLPNRYTVSTVIAALVNEGVVGIGLQV-HAMVVKHGFEEAIPVFNSLISLYSRLGMLR 246
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+A + +M + D V W+ ++ ++G+
Sbjct: 247 DARDVFDKMEIR-DWVTWNSMIAGYVRNGQ 275
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/591 (37%), Positives = 331/591 (56%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + C G I+ Q+H I N D++V+ LI+MY+K+ LD AR + +
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKN--GFESDMYVSGVLIDMYSKYRCLDKARKILEM 406
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HG 122
+ KR+VVSWT++I+GY QH EE F + +P+ LAS +C + G
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HA A + + N L+N+Y++ ++EA+ +F ++ ++ I+WN +I+ F
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQS 526
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+L QA+ +F KM +F TF + A A L + VH
Sbjct: 527 RLYEQALMVFMKMSQAGAKYNVF-------------TFISAISALANLADIKQGKQVHGR 573
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G +T +ANALI Y +CGSI +K +F +M+ + VSWN+I+ + + HG+ EA
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L LF M ++P+ TF+ +L+ACSH GLV+EG F SM +G+ P DHYAC+VD
Sbjct: 634 LDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVD 693
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+LGR G++ A + + EMP+ +++IW LL +C+ H + ELAA L +LEP DS
Sbjct: 694 ILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSAS 753
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SN Y ++G + +RK MK +RK PG SWIE++N VH F G + HP + I
Sbjct: 754 YVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQI 813
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+K L EL +L +GY E H+ E+E K+ + HSEKLA+ F +M
Sbjct: 814 YKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIP--- 870
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R++KN+R+C DCH++MK S++ +EIV+RD RFHHF CSC DYW
Sbjct: 871 -LRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 212/418 (50%), Gaps = 28/418 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+L ACA G++++ QLH +++ D L+++Y K G ++ A +F+
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLK--AGMSFDYITEGSLLDLYVKCGDIETAHDIFNLG 306
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GK 123
+ NVV W ++ Y Q + + F +F + PN+F+ +L +C G+
Sbjct: 307 DRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGE 366
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H+L++K ++ +YV+ LI+MYSK C D+A K+ E +E R+V+SW SMIA
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAG----- 421
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ + EEAL F+++Q G+ PD + ACAG+ R +H+ +
Sbjct: 422 --------YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
G+ D I N L++ YARCG + +F ++ + D ++WN ++ + ++AL
Sbjct: 474 YVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQAL 533
Query: 303 QLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F M+ + + TF+S +SA ++ +++G +V H G + + ++ L
Sbjct: 534 MVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQV-HGRAVKTGHTSETEVANALISL 592
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPGD 415
G+ G I +A+ + EM + + V W+ ++ SC +HG A ++KQ L+P D
Sbjct: 593 YGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPND 649
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 191/393 (48%), Gaps = 25/393 (6%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
AC GN + + L H + D + N LI++YAK G + AR +F E+ R
Sbjct: 49 LQACRGRGN-RWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLHGKLVH 126
+ VSW A++SGYAQ G +E FRL+ + P + L+SVL +C + G+++H
Sbjct: 108 DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167
Query: 127 ALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A K + + +V NALI +Y A +VF +M F + +++N++I+ C
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCG--- 224
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ E AL +F ++Q G+ PD T + +L ACA + + +HS + K
Sbjct: 225 ----------HGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKA 274
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G D + +L+ Y +CG I + +F+ ++V WN +L AY ++ ++F
Sbjct: 275 GMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIF 334
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M + P+ T+ +L C+ G ++ G ++ HS+ +G + ++D+ +
Sbjct: 335 GQMQATGIHPNKFTYPCILRTCTCTGQIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
R L+ + I EM + D V W+ ++ +H
Sbjct: 394 Y-RCLDKARKILEMLEKRDVVSWTSMIAGYVQH 425
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 343/592 (57%), Gaps = 18/592 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC+ ++ +LH + + N + ++ FV + L++MY + R +FD M
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLD-ENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHG 122
R + W A+I+GY+Q+ + +E LF + + N ++A V+ +C +
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K LD +V N L++MYS+ D A ++F ME R++++WN+MI +
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ A+ L KM+N E + + R + P+ T +L +CA L +H+
Sbjct: 485 EHHEDALLLLHKMQNLERKVS--KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K D + +AL+ YA+CG + +S++VFD++ ++++WN I+ AY +HG +EA
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ L M VQ P+ TF+S+ +ACSH+G+V EG ++F+ M ++GV P DHYAC+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 359 LLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
LLGR GRI EA +L+ MP + + WS LLG+ R H + E+AA L QLEP +
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V ++NIY +G ++KA +R+ MK VRK PG SWIE + VH+F +G HPQ E
Sbjct: 723 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 782
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ LE L +++ GYVP+TS LH++EE+ KE L HSEKLA+ F I+N
Sbjct: 783 LSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP----G 838
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++IR+ KN+R+C DCH K S ++ +EI++RD RFH FK+ CSC DYW
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 190/400 (47%), Gaps = 39/400 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A A +++ Q+H H + F + V N L+N+Y K G +FD
Sbjct: 100 FPALLKAVADLQDMELGKQIHAH-VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 68 MPKRNVVSWTALIS---GYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH--- 121
+ +RN VSW +LIS + + A E FR C L + P+ F+L SV+ +C L
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFR--CMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFRNVISWNSMIA 176
GK VHA L+ + + ++ N L+ MY K + KV + R++++WN++++
Sbjct: 217 GLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 177 AFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ C +NE+ EAL R++ EG+ PD T S VL AC+ L R
Sbjct: 276 SL--C-------------QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 235 ASAVHSLIAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H+ K G ++++ + +AL+ Y C + ++VFD M + WN+++ Y+
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 294 LHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ KEAL LF M + +S T ++ AC +G + H + G+
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRD 439
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ R+G+I A ++ +M + D V W+ ++
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 14/202 (6%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANAL 257
EA+ + + G+ PD F +LKA A L +H+ + K+G+ D+V +AN L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
++ Y +CG +VFD+++ + VSWNS++ + + + AL+ F M NV+P S
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 315 ATFVSLLSACSHAGLVQEG---NKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEA 369
T VS+++ACS+ + EG K H+ G +L+ + +V + G++G++ +
Sbjct: 200 FTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKG---ELNSFIINTLVAMYGKLGKLASS 255
Query: 370 EKLIREMPMEPDSVIWSVLLGS 391
+ L+ D V W+ +L S
Sbjct: 256 KVLLGSFGGR-DLVTWNTVLSS 276
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 343/592 (57%), Gaps = 18/592 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC+ ++ +LH + + N + ++ FV + L++MY + R +FD M
Sbjct: 219 SSVLPACSHLEMLRTGKELHAYALKNGSLD-ENSFVGSALVDMYCNCKQVLSGRRVFDGM 277
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHG 122
R + W A+I+GY+Q+ + +E LF + + N ++A V+ +C +
Sbjct: 278 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 337
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K LD +V N L++MYS+ D A ++F ME R++++WN+MI +
Sbjct: 338 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 397
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ A+ L KM+N E + + R + P+ T +L +CA L +H+
Sbjct: 398 EHHEDALLLLHKMQNLERKVS--KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 455
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K D + +AL+ YA+CG + +S++VFD++ ++++WN I+ AY +HG +EA
Sbjct: 456 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 515
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ L M VQ P+ TF+S+ +ACSH+G+V EG ++F+ M ++GV P DHYAC+VD
Sbjct: 516 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 575
Query: 359 LLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
LLGR GRI EA +L+ MP + + WS LLG+ R H + E+AA L QLEP +
Sbjct: 576 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 635
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V ++NIY +G ++KA +R+ MK VRK PG SWIE + VH+F +G HPQ E
Sbjct: 636 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 695
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ LE L +++ GYVP+TS LH++EE+ KE L HSEKLA+ F I+N
Sbjct: 696 LSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP----G 751
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++IR+ KN+R+C DCH K S ++ +EI++RD RFH FK+ CSC DYW
Sbjct: 752 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 189/400 (47%), Gaps = 39/400 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A A +++ Q+H H + F + V N L+N+Y K G +FD
Sbjct: 13 FPALLKAVADLQDMELGKQIHAH-VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 71
Query: 68 MPKRNVVSWTALIS---GYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH--- 121
+ +RN VSW +LIS + + A E FR C L + P+ F+L SV+ +C L
Sbjct: 72 ISERNQVSWNSLISSLCSFEKWEMALEAFR--CMLDENVEPSSFTLVSVVTACSNLPMPE 129
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFRNVISWNSMIA 176
GK VHA L+ + + ++ N L+ MY K + KV + R++++WN++++
Sbjct: 130 GLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 188
Query: 177 AFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ +NE+ EAL R++ EG+ PD T S VL AC+ L R
Sbjct: 189 SL---------------CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 233
Query: 235 ASAVHSLIAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H+ K G ++++ + +AL+ Y C + ++VFD M + WN+++ Y+
Sbjct: 234 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 293
Query: 294 LHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ KEAL LF M + +S T ++ AC +G + H + G+
Sbjct: 294 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRD 352
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ R+G+I A ++ +M + D V W+ ++
Sbjct: 353 RFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 391
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 14/190 (7%)
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISL 269
G+ PD F +LKA A L +H+ + K+G+ D+V +AN L++ Y +CG
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+VFD+++ + VSWNS++ + + + AL+ F M NV+P S T VS+++ACS+
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 327 AGLVQEG---NKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEAEKLIREMPMEPD 381
+ EG K H+ G +L+ + +V + G++G++ ++ L+ D
Sbjct: 125 LPM-PEGLMMGKQVHAYGLRKG---ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-D 179
Query: 382 SVIWSVLLGS 391
V W+ +L S
Sbjct: 180 LVTWNTVLSS 189
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 325/555 (58%), Gaps = 27/555 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
++ L +MY+K G ++ AR +FD M ++ VVSW +++ GY Q+G E+ +F +L+
Sbjct: 285 ISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEG 344
Query: 104 F-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
P ++ L +C D GK VH + +L + + V N+LI+MYSK D A
Sbjct: 345 IDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIAS 404
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F N+ R +SWN+MI + A+ EAL F +++ GM PD
Sbjct: 405 DIFNNLNGRTHVSWNAMILGY-------------AQNGRVSEALNCFSEMKSLGMKPDSF 451
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T V+ A A L RHA +H LI + + + + AL+ Y++CG+I +++++FD +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
+ +++WN+++ Y HG + AL LF M V+P+ T++S++SACSH+GLV EG
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM +++G+ P +DHY MVDLLGR GRI EA I MP+ P ++ G+C+
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKI 631
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H + E AA KL +L P + V ++NIY + ++K +RK M+ ++K PG S
Sbjct: 632 HKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCS 691
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
+E+ N VH F SG HPQ + I+ LEEL+ ++K GYVP+T+L L D+E++ +E+ L
Sbjct: 692 VVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLL 750
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ F ++N + I + KN+R+C DCHN K S + G+EI+VRD R
Sbjct: 751 NSHSEKLAIAFGLLNTSP----GTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQR 806
Query: 575 FHHFKDRICSCNDYW 589
FHHFK+ ICSC DYW
Sbjct: 807 FHHFKNGICSCGDYW 821
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 163/335 (48%), Gaps = 26/335 (7%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-L 100
LF T L+++++K+G +++A +F+ + + + ++ GYA++ + E C +
Sbjct: 82 LFQTK-LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRY 140
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--AD 154
P ++ +L C D GK +H + S A+V+ ++NMY+K C D
Sbjct: 141 DDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAK-CRQID 199
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A+K+F+ M R+++SWN++IA F +A+EL +M Q EG P
Sbjct: 200 DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRM-------------QDEGQRP 246
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T VL A A + ++H + GF I+ AL Y++CGS+ ++ +F
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIF 306
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M +VSWNS++ Y +G+ ++A+ +F M + P T + L AC+ G ++
Sbjct: 307 DGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLE 366
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
G K H ++ + + ++ + + R+
Sbjct: 367 RG-KFVHKFVDQLNLGSDISVMNSLISMYSKCKRV 400
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 59/341 (17%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
HACA G++++ +H+ + + N D+ V N LI+MY+K +D A +F+ + R
Sbjct: 356 LHACADLGDLERGKFVHKFV--DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HGKLVH 126
VSW A+I GYAQ+G E F + P+ F++ SV+ + L H K +H
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
L ++ LD +++V AL++MYSK A A K+F+ + R+VI+WN+MI + L
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE--RHASAVHSL 241
A++LF KMK + + P+ T+ V+ AC +GLV E RH S+
Sbjct: 534 AALDLFDKMK-------------KGAVEPNDITYLSVISACSHSGLVDEGLRH---FKSM 577
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
YG E A++ R G I KEA
Sbjct: 578 KQDYGLEPSMDHYGAMVDLLGRAGRI-------------------------------KEA 606
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
NM + P + + AC ++ G K + E
Sbjct: 607 WDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFE 647
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 95/207 (45%), Gaps = 9/207 (4%)
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+++L+ C + + + L+ K G ++ + L+ +++ GSI+ + +VF+ +
Sbjct: 53 AVLLELCTSM---KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
++++LK YA + + AL M +V+P F LL C ++ G ++
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H L + + +V++ + +I +A K+ MP E D V W+ ++ ++G
Sbjct: 170 -HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAGFSQNG 227
Query: 397 ETRLA-ELAATKLKQLEPGDSLGFVQM 422
+ A EL + + DS+ V +
Sbjct: 228 FAKKALELVLRMQDEGQRPDSITLVTV 254
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 333/575 (57%), Gaps = 35/575 (6%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYF 103
N ++++ G +D A LF+ MP R++VSW A+I+GY Q+G + +LF +L
Sbjct: 234 NAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 293
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWK 158
P+EF++ SVL +C L GK VHA L+ + + V NALI+ Y+KS + E A +
Sbjct: 294 APDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARR 353
Query: 159 VFE-NMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------ 198
+ + +ME NVIS+ +++ + A E+F M N +
Sbjct: 354 IMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND 413
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EA+ LFR + G P+ T + VL CA L + +H + E + ++NA+I
Sbjct: 414 EAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAII 473
Query: 259 HAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
YAR GS ++++FD++ + + ++W S++ A A HGQ +EA+ LF M V+PD
Sbjct: 474 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 533
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T+V +LSACSHAG V EG + + + H + P++ HYACMVDLL R G EA++ IR
Sbjct: 534 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 593
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
MP+EPD++ W LL +CR H LAELAA KL ++P +S + ++N+Y G ++
Sbjct: 594 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 653
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
A I K K VRK G SW I +++H F + HPQR+A++ + ++KG G+
Sbjct: 654 AARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGF 713
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
VP+ LHD+++E KEE L HSEKLA+ F +++ E++ +R+MKN+R+C DCH
Sbjct: 714 VPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLIST----PEKTTLRVMKNLRVCNDCHA 769
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K S + +EI+VRD+ RFHHF+D +CSC DYW
Sbjct: 770 AIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 210/457 (45%), Gaps = 100/457 (21%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G ++ A +L + + P +++F N L++M+AK G L DAR +F EMP+R+ VSWT
Sbjct: 79 GGLRDARRLFDEI----PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTV 134
Query: 79 LISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFS 133
++ G + G E + + F P +F+L +VL SC G+ VH+ +K
Sbjct: 135 MVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG 194
Query: 134 LDAHVYVANALINMYSKSCAD----------------EAW-----------------KVF 160
L + V VAN+++NMY K C D +W +F
Sbjct: 195 LGSCVPVANSVLNMYGK-CGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLF 253
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E+M R+++SWN+MIA + L+A+A++LF++M L MAPD T +
Sbjct: 254 ESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRM------------LHESSMAPDEFTIT 301
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK---- 276
VL ACA L R VH+ I + ++ + NALI YA+ GS+ ++++ D+
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMET 361
Query: 277 -----------------------------MTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
M D+V+W +++ Y +G+ EA+ LF +
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKV----FHSMLENHGVVPQLDHYACMVDLL 360
M +P+S T ++LS C+ + G ++ S+LE V ++ +
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSN-----AIITMY 476
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
R G A ++ ++ +++ W+ ++ + +HG+
Sbjct: 477 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQ 513
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 180/380 (47%), Gaps = 65/380 (17%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE-- 67
++ ACA GN++ Q+H +++ + VTN LI+ YAK G +++AR + D+
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRT--EMAYNSQVTNALISTYAKSGSVENARRIMDQSM 359
Query: 68 -------------------------------MPKRNVVSWTALISGYAQHGNAEECFRLF 96
M R+VV+WTA+I GY Q+G +E LF
Sbjct: 360 ETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLF 419
Query: 97 CSLLQYFF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS 151
S++ PN ++LA+VL C L +GK +H A++ L+ V+NA+I MY++S
Sbjct: 420 RSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARS 479
Query: 152 CA-DEAWKVFENMEFRN-VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+ A ++F+ + +R I+W SMI A A+ EEA+ LF ++ R
Sbjct: 480 GSFPWARRMFDQVCWRKETITWTSMIVA-------------LAQHGQGEEAVGLFEEMLR 526
Query: 210 EGMAPDWCTFSIVLKAC--AGLVTE--RHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
G+ PD T+ VL AC AG V E R+ + + ++ + ++ AR G
Sbjct: 527 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN---EHQIAPEMSHYACMVDLLARAG 583
Query: 266 SISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEA-LQLFSNMNVQP-DSATFVSLLS 322
S +++ +M D ++W S+L A +H A+ A L +++ P +S + ++ +
Sbjct: 584 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 643
Query: 323 ACSHAGLVQEGNKVFHSMLE 342
S G + +++ + E
Sbjct: 644 VYSACGRWSDAARIWKARKE 663
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 122/275 (44%), Gaps = 60/275 (21%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD-----EAWKVFENMEF--RNVISWNSM 174
G+ +HA A+K L A Y+ N L++ Y ++ +A ++F+ + RNV +WNS+
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 175 IAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDW 216
++ F A A +FA+M + EA+ + +G P
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS---------- 266
T + VL +CA VHS + K G +AN++++ Y +CG
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFER 224
Query: 267 ---------------------ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
+ L++ +F+ M +VSWN+++ Y +G +AL+LF
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 306 SNM----NVQPDSATFVSLLSACSHAGLVQEGNKV 336
S M ++ PD T S+LSAC++ G V+ G +V
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQV 319
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A + CA + Q+H I + V+N +I MYA+ G AR +FD++
Sbjct: 435 AAVLSVCASLACLDYGKQIHCRAIRSLLERSSS--VSNAIITMYARSGSFPWARRMFDQV 492
Query: 69 P-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
++ ++WT++I AQHG EE LF +L+ P+ + VL +C +
Sbjct: 493 CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSH 545
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 343/592 (57%), Gaps = 18/592 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC+ ++ +LH + + N + ++ FV + L++MY + R +FD M
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLD-ENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHG 122
R + W A+I+GY+Q+ + +E LF + + N ++A V+ +C +
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K LD +V N L++MYS+ D A ++F ME R++++WN+MI +
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ A+ L KM+N E + + R + P+ T +L +CA L +H+
Sbjct: 485 EHHEDALLLLHKMQNLERKVS--KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K D + +AL+ YA+CG + +S++VFD++ ++++WN I+ AY +HG +EA
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ L M VQ P+ TF+S+ +ACSH+G+V EG ++F+ M ++GV P DHYAC+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 359 LLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
LLGR GRI EA +L+ MP + + WS LLG+ R H + E+AA L QLEP +
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V ++NIY +G ++KA +R+ MK VRK PG SWIE + VH+F +G HPQ E
Sbjct: 723 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 782
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ LE L +++ GYVP+TS LH++EE+ KE L HSEKLA+ F I+N
Sbjct: 783 LSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP----G 838
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++IR+ KN+R+C DCH K S ++ +EI++RD RFH FK+ CSC DYW
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 190/400 (47%), Gaps = 39/400 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A A +++ Q+H H + F + V N L+N+Y K G +FD
Sbjct: 100 FPALLKAVADLQDMELGKQIHAH-VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 68 MPKRNVVSWTALIS---GYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH--- 121
+ +RN VSW +LIS + + A E FR C L + P+ F+L SV+ +C L
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFR--CMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFRNVISWNSMIA 176
GK VHA L+ + + ++ N L+ MY K + KV + R++++WN++++
Sbjct: 217 GLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 177 AFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ C +NE+ EAL R++ EG+ PD T S VL AC+ L R
Sbjct: 276 SL--C-------------QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 235 ASAVHSLIAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H+ K G ++++ + +AL+ Y C + ++VFD M + WN+++ Y+
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 294 LHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ KEAL LF M + +S T ++ AC +G + H + G+
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRD 439
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ R+G+I A ++ +M + D V W+ ++
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 14/202 (6%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANAL 257
EA+ + + G+ PD F +LKA A L +H+ + K+G+ D+V +AN L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
++ Y +CG +VFD+++ + VSWNS++ + + + AL+ F M NV+P S
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 315 ATFVSLLSACSHAGLVQEG---NKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEA 369
T VS+++ACS+ + EG K H+ G +L+ + +V + G++G++ +
Sbjct: 200 FTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKG---ELNSFIINTLVAMYGKLGKLASS 255
Query: 370 EKLIREMPMEPDSVIWSVLLGS 391
+ L+ D V W+ +L S
Sbjct: 256 KVLLGSFGGR-DLVTWNTVLSS 276
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/591 (38%), Positives = 339/591 (57%), Gaps = 29/591 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ C G+I AM +H ++I + DLFV+N LINMYAKFG L+DAR F +M
Sbjct: 320 VSILPVCPQLGDISTAMLIHLYVIKH--GLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLAS----VLISCDYLHGK 123
+VVSW ++I+ Y Q+ + F + L F P+ +L S V S D + +
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437
Query: 124 LVHALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH ++ L V + NA+++MY+K D A KVFE + ++VISWN++I +
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 497
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L ++AIE++ M+ +E + P+ T+ +L A A + + +H
Sbjct: 498 GLASEAIEVYKMMEECKEII------------PNQGTWVSILPAYAHVGALQQGMKIHGR 545
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K D +A LI Y +CG + + +F ++ V+WN+I+ + +HG A++
Sbjct: 546 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKT 605
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+LF M V+PD TFVSLLSACSH+G V+EG F M E +G+ P L HY CMVD
Sbjct: 606 LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVD 664
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G + A I++MP++PD+ IW LLG+CR HG L + A+ +L +++ +
Sbjct: 665 LLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGY 724
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SNIY G + +R + ++K PG S IE+ +V F +G + HP+ + I
Sbjct: 725 YVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEI 784
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+++L L ++K +GY+P+ S L D+EE+ KE L HSE+LA+ F I++ +S
Sbjct: 785 YEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIST----PPKS 840
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+C DCHN K S + +EIVVRDSNRFHHFKD ICSC DYW
Sbjct: 841 PIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 193/380 (50%), Gaps = 24/380 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q +F++ L+N+YA G + +R FD++P+++V +W ++IS Y +G+ E F L
Sbjct: 149 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQL 208
Query: 100 L--QYFFPNEFSLASVLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
L P+ ++ VL +C L G+ +H A K +V+VA +LI+MYS+
Sbjct: 209 LLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A +F++M FR++ SWN+MI+ AQA+++ +M+ EG+ +
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR-------------LEGIKMN 315
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+ T +L C L A +H + K+G E D ++NALI+ YA+ G++ +++ F
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQE 332
+M D+VSWNSI+ AY + A F M + QPD T VSL S + + +
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
V ++ ++ + +VD+ ++G + A K+ +P++ D + W+ L+
Sbjct: 436 SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITGY 494
Query: 393 RKHGETRLAELAATKLKQLE 412
++G LA A K +E
Sbjct: 495 AQNG---LASEAIEVYKMME 511
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 156/323 (48%), Gaps = 26/323 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAFRA 180
K +HAL + ++++ L+N+Y+ + D + F+ + ++V +WNSMI+A+
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYA-NLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+AI F + L L +++ PD+ TF VLKAC LV R +H
Sbjct: 195 NGHFHEAIGCFYQ-------LLLVSEIR-----PDFYTFPPVLKACGTLVDGR---KIHC 239
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K GF+ + +A +LIH Y+R G +++ +FD M + D+ SWN+++ +G A +
Sbjct: 240 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 299
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL + M ++ + T VS+L C G + + H + HG+ L ++
Sbjct: 300 ALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTA-MLIHLYVIKHGLEFDLFVSNALI 358
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE--LAATKLKQLEPGD 415
++ + G + +A K ++M + D V W+ ++ + ++ + A +L +P D
Sbjct: 359 NMYAKFGNLEDARKAFQQMFIT-DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP-D 416
Query: 416 SLGFVQMSNIYCLSGSFNKARLI 438
L V +++I S +R +
Sbjct: 417 LLTLVSLASIVAQSRDCKNSRSV 439
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
A +H+L+ G I+ L++ YA G +SLS+ FD++ D+ +WNS++ AY
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 295 HGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G EA+ F + ++PD TF +L AC G + +G K+ H G +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKI-HCWAFKLGFQWNV 250
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
A ++ + R G A L +MP D W+ ++ ++G A L +
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQA-LDVLDEMR 308
Query: 411 LEPGDSLGFVQMSNI 425
LE G + FV + +I
Sbjct: 309 LE-GIKMNFVTVVSI 322
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/593 (36%), Positives = 346/593 (58%), Gaps = 35/593 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ AC G+++ +H++MI + D +N LINMYAK G L ++ +F M
Sbjct: 320 TSILQACGHLGDLEFGKYVHDYMITS--GYECDTTASNILINMYAKCGNLLASQEVFSGM 377
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFS---LASVLISCDYLH-GKL 124
++ VSW ++I+ Y Q+G+ +E +LF + P+ + L S+ LH GK
Sbjct: 378 KCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKE 437
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA---FR 179
+H K ++++ V+N L++MY+K C + ++ KVFENM+ R++I+WN++IA+
Sbjct: 438 LHCDLAKMGFNSNIVVSNTLVDMYAK-CGEMGDSLKVFENMKARDIITWNTIIASCVHSE 496
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C L L + +++ EG+ PD T +L C+ L +R +H
Sbjct: 497 DCNL----------------GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH 540
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I K G E D + N LI Y++CGS+ S QVF M D+V+W +++ A ++G+ K
Sbjct: 541 GCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK 600
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+A++ F M + PD FV+++ ACSH+GLV+EG FH M +++ + P+++HYAC+
Sbjct: 601 KAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACV 660
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLL R + +AE I MP++PDS IW LL +CR G+T +AE + ++ +L P D+
Sbjct: 661 VDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDT 720
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SNIY G +++ R IRK +K ++K PG SW+EI+N+V+ F +G K Q E
Sbjct: 721 GYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFE 780
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
+ K L L G + GY+ LHDI+E+ K + L HSE+LA+ F ++N +
Sbjct: 781 EVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNT----KP 836
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +++MKN+R+C DCH K S ++ +E++VRD+NRFH FKD CSC DYW
Sbjct: 837 GTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 207/396 (52%), Gaps = 26/396 (6%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T + ++ +ACA + + A +H+ +++ DL++ N LI+MY +F LD AR +
Sbjct: 115 TYTFPSVINACAGLLDFEMAKSIHDRVLD--MGFGSDLYIGNALIDMYCRFNDLDKARKV 172
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL--- 120
F+EMP R+VVSW +LISGY +G E ++ P+ ++++SVL +C L
Sbjct: 173 FEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSV 232
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
G ++H L K + V V N L++MY K + + ++F+ M R+ +SWN+MI +
Sbjct: 233 EEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGY 292
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
L ++I+LF +M N+ PD T + +L+AC L V
Sbjct: 293 SQVGLYEESIKLFMEMVNQ--------------FKPDLLTITSILQACGHLGDLEFGKYV 338
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + G+E DT +N LI+ YA+CG++ S++VF M D VSWNS++ Y +G
Sbjct: 339 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSF 398
Query: 299 KEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA++LF M +V+PDS T+V LLS + G + G K H L G + +
Sbjct: 399 DEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLG-KELHCDLAKMGFNSNIVVSNTL 457
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
VD+ + G + ++ K+ M D + W+ ++ SC
Sbjct: 458 VDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASC 492
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 205/402 (50%), Gaps = 28/402 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC G++++ +H +I + +D+ V N L++MY KF L D R +FD+M
Sbjct: 220 SSVLRACGGLGSVEEGDIIH-GLIEKIGIK-KDVIVNNGLLSMYCKFNGLIDGRRIFDKM 277
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL----HGKL 124
R+ VSW +I GY+Q G EE +LF ++ F P+ ++ S+L +C +L GK
Sbjct: 278 VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKY 337
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACK 182
VH + + +N LINMY+K C + + +VF M+ ++ +SWNSMI +
Sbjct: 338 VHDYMITSGYECDTTASNILINMYAK-CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNG 396
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+A++LF MK + + PD T+ ++L L +H +
Sbjct: 397 SFDEAMKLFKMMKTD--------------VKPDSVTYVMLLSMSTQLGDLHLGKELHCDL 442
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
AK GF + V++N L+ YA+CG + S +VF+ M D+++WN+I+ + L
Sbjct: 443 AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGL 502
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
++ S M V PD AT +S+L CS ++G ++ H + G+ + ++++
Sbjct: 503 RMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI-HGCIFKLGLESDVPVGNVLIEM 561
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ G + + ++ + M + D V W+ L+ +C +GE + A
Sbjct: 562 YSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGEGKKA 602
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 186/384 (48%), Gaps = 27/384 (7%)
Query: 51 MYAKFGYLDDARHLFDEM----PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-P 105
+ AK+ + D F P NV W ++I +G E L+ + P
Sbjct: 54 LIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQP 113
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ ++ SV+ +C D+ K +H L + +Y+ NALI+MY + + D+A KVF
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVF 173
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E M R+V+SWNS+I+ + A +A+E++ + FR L G+ PD T S
Sbjct: 174 EEMPLRDVVSWNSLISGYNANGYWNEALEIY----------YRFRNL---GVVPDSYTMS 220
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
VL+AC GL + +H LI K G + D ++ N L+ Y + + +++FDKM
Sbjct: 221 SVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR 280
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
D VSWN+++ Y+ G +E+++LF M +PD T S+L AC H G ++ G K H
Sbjct: 281 DAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFG-KYVH 339
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+ G ++++ + G +L ++++ M + DSV W+ ++ ++G
Sbjct: 340 DYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMINVYIQNGSF 398
Query: 399 RLAELAATKLKQLEPGDSLGFVQM 422
A +K DS+ +V +
Sbjct: 399 DEAMKLFKMMKTDVKPDSVTYVML 422
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 8/183 (4%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS + +A A T +HSLI G + + LI YA + S VF +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 279 -YHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQ-EG 333
+++ WNSI++A +G EAL L+S + +QPD+ TF S+++AC AGL+ E
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEM 133
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K H + + G L ++D+ R + +A K+ EMP+ D V W+ L+
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLISGYN 192
Query: 394 KHG 396
+G
Sbjct: 193 ANG 195
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/560 (38%), Positives = 328/560 (58%), Gaps = 33/560 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
F+ + L++ Y + G DA LFDE+P +++VSW +LISG+++ + C L L +
Sbjct: 74 FIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGL---LFRM 130
Query: 103 FF-----PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SC 152
F PNE ++ V+ +C + GK +H +A+K + V V N+LIN+Y K C
Sbjct: 131 RFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGC 190
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+ A +FE M ++++SWNSM+A + M E+ + F ++R G+
Sbjct: 191 LEAACCLFEGMSVQSLVSWNSMVA-------------VHVHMGLAEKGIGYFIMMRRAGI 237
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D T +L AC L + A AVH I G + + IA AL+ YA+ G++S S +
Sbjct: 238 NSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCK 297
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VF M D V+W ++L +YA+HG+ +EA++ F M V PD TF LLSACSH+GL
Sbjct: 298 VFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGL 357
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+EG F M E +GV +++HY+CMVDLLGR G + +A KLI+ MPMEP+S +W L+
Sbjct: 358 VEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALI 417
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G+CR G L + A +L L+P DS ++ +SN+Y +G + A +R MK + +
Sbjct: 418 GACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIR 477
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PG S+IE N++H F G + HP E I+ KLEEL+ + + +G+ +T LHD++EE
Sbjct: 478 NPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEV 537
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE+ + HSEKLA+ F ++ + + I KNIRIC DCH F KL S + + I++
Sbjct: 538 KEDLINKHSEKLAIAFGLL----VTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIII 593
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+ RFHHF + +CSC DYW
Sbjct: 594 RDTKRFHHFTNGLCSCGDYW 613
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L AC G K A +H +++N + +L + L+++YAK G L D+ +F M
Sbjct: 246 SLLLACENLGVRKLAEAVHGYILNGGLD--GNLAIATALLDLYAKLGTLSDSCKVFGGMI 303
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHAL 128
+ V+WTA++S YA HG E F ++ + P+ + +L +C H LV
Sbjct: 304 NPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACS--HSGLVEEG 361
Query: 129 ALKFSLDAHVYVANALINMYS--------KSCADEAWKVFENMEFR-NVISWNSMIAAFR 179
F + Y + YS ++A+K+ ++M N W ++I A R
Sbjct: 362 KNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACR 421
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 212 MAPDWCTFSIVLKACAGLVTE-------RHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
++P + FS V + L+T + A+H + K + I + L+ +Y
Sbjct: 27 LSPTFHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVEL 86
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN----MNVQPDSATFVSL 320
G + ++FD++ DLVSWNS++ ++ L L M ++P+ T + +
Sbjct: 87 GCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPV 146
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+SAC+ G + G K H + G++ ++ +++L G+ G + A L M ++
Sbjct: 147 VSACAGVGELDVG-KCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQ 204
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/591 (38%), Positives = 339/591 (57%), Gaps = 39/591 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L G + +A +L + M + +D+ +++ Y + G + +AR LFDE
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMPD------RDVVAWTAMLSGYCQAGRITEARALFDE 199
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVH 126
MPKRNVVSWTA+ISGYAQ+G +LF + + NE S ++L+ Y+ G +
Sbjct: 200 MPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER---NEVSWTAMLVG--YIQAGHVED 254
Query: 127 ALALKFSLDAHVYVA-NAL-INMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A L ++ H A NA+ + + D A VFE M R+ +W++MI A+
Sbjct: 255 AAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYE----- 309
Query: 185 AQAIELFAKMKNE--EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+NE EAL FR++ G+ P++ + +L CA L + VH+ +
Sbjct: 310 ----------QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAM 359
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ F+ D +ALI Y +CG++ +K+VF D+V WNS++ YA HG ++AL
Sbjct: 360 LRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQAL 419
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F +M + PD T++ L+ACS+ G V+EG ++F+SM N + P +HY+CMVDL
Sbjct: 420 GIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDL 479
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G + EA LI+ MP+EPD+VIW L+G+CR H +AE+AA KL +LEPG++ +
Sbjct: 480 LGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPY 539
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAI 478
V +S+IY G + A +RK + + K PG SWIE + RVH F SG HP+ AI
Sbjct: 540 VLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAI 599
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ LE+L G L GY + S LHDI+EE K L +HSE+ A+ + ++ E
Sbjct: 600 LRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLK----IPEGM 655
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+R+C DCH+ +KL + + +EIV+RD+NRFHHFKD CSC DYW
Sbjct: 656 PIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 181/450 (40%), Gaps = 63/450 (14%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--------- 96
N I A+ G ++ AR F+ MP R S+ AL++GY ++ + LF
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 97 --------------------CSLLQYFFPNEFSLASVLISCDYLHGKLVHALAL--KFSL 134
+L FP + L+ HG L A+ L +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 135 DAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
HV L + +EA ++F+ M R+V++W +M++ + +A LF +M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 195 KN--------------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + L R+L + +++ +L G + H
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML---VGYIQAGHVEDAAE 257
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L E NA++ + + G + +K VF+KM D +W++++KAY + E
Sbjct: 258 LFNAMP-EHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLME 316
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA--C 355
AL F M V+P+ + +S+L+ C+ ++ G +V +ML +D +A
Sbjct: 317 ALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSF---DMDVFAVSA 373
Query: 356 MVDLLGRVGRILEAEKLIREMPMEP-DSVIWSVLLGSCRKH--GETRLAELAATKLKQLE 412
++ + + G + +A+++ EP D V+W+ ++ +H GE L +L +
Sbjct: 374 LITMYIKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
P D + ++ +G + R I M
Sbjct: 432 P-DGITYIGALTACSYTGKVKEGREIFNSM 460
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/555 (39%), Positives = 324/555 (58%), Gaps = 27/555 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QY 102
V +++ Y K G + AR +F M RNVVSW +I GYAQ+G +EE F F +L +
Sbjct: 280 VATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEG 339
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
P S+ L +C D G+ VH L + + V V N+LI+MYSK D A
Sbjct: 340 VEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAA 399
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
VF N++ + V++WN+MI + A+ EAL LF ++Q + PD
Sbjct: 400 SVFGNLKHKTVVTWNAMILGY-------------AQNGCVNEALNLFCEMQSHDIKPDSF 446
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T V+ A A L R A +H L + + + + ALI +A+CG+I ++++FD M
Sbjct: 447 TLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLM 506
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+++WN+++ Y +G +EAL LF+ M +V+P+ TF+S+++ACSH+GLV+EG
Sbjct: 507 QERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGM 566
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
F SM EN+G+ P +DHY MVDLLGR GR+ +A K I++MP++P + +LG+CR
Sbjct: 567 YYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRI 626
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H L E A +L L+P D V ++N+Y + ++K +R M+ ++K PG S
Sbjct: 627 HKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCS 686
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
+E+ N VH F SG HPQ + I+ LE L ++K GYVP+T+ ++HD+EE+ KE+ L
Sbjct: 687 LVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTN-SIHDVEEDVKEQLL 745
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSE+LA+ F ++N R + I I KN+R+C DCH K S + G+EI+VRD R
Sbjct: 746 SSHSERLAIAFGLLN----TRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRR 801
Query: 575 FHHFKDRICSCNDYW 589
FHHFK+ ICSC DYW
Sbjct: 802 FHHFKNGICSCGDYW 816
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 163/319 (51%), Gaps = 26/319 (8%)
Query: 33 NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEEC 92
N F NE LF T LI+++ KF + +A +F+ + + V + ++ GYA++ +
Sbjct: 70 NGFYNE--HLFQTK-LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDA 126
Query: 93 FRLF----CS-LLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINM 147
R + C ++ + + L + D G+ +H + + ++++ A++N+
Sbjct: 127 VRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNL 186
Query: 148 YSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
Y+K ++A+K+FE M R+++SWN+++A + +A+++ Q
Sbjct: 187 YAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVL-------------Q 233
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+Q G PD T VL A A L R ++H + GFE +A A++ Y +CGS
Sbjct: 234 MQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGS 293
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ ++ VF M+ ++VSWN+++ YA +G+++EA F M V+P + + + L A
Sbjct: 294 VRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHA 353
Query: 324 CSHAGLVQEGNKVFHSMLE 342
C++ G ++ G V H +L+
Sbjct: 354 CANLGDLERGRYV-HRLLD 371
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 159/327 (48%), Gaps = 38/327 (11%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQ---DLFVTNHLINMYAKFGYLDDARHLFDEM 68
HACA G++++ +H + +E + D+ V N LI+MY+K +D A +F +
Sbjct: 351 LHACANLGDLERGRYVHRLL-----DEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNL 405
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HGK 123
+ VV+W A+I GYAQ+G E LFC + + P+ F+L SV+ + L K
Sbjct: 406 KHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAK 465
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H LA++ +D +V+V ALI+ ++K A A K+F+ M+ R+VI+WN+MI
Sbjct: 466 WIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDG----- 520
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHS 240
+ + EAL LF ++Q + P+ TF V+ AC +GLV E S
Sbjct: 521 --------YGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLV-EEGMYYFES 571
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLS-KQVFDKMTYHDLVSWNSILKAYALHGQA- 298
+ YG E A++ R G + + K + D + ++L A +H
Sbjct: 572 MKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVE 631
Query: 299 ---KEALQLFSNMNVQPDSATFVSLLS 322
K A +LF ++ PD + LL+
Sbjct: 632 LGEKTADELF---DLDPDDGGYHVLLA 655
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 52/304 (17%)
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+I+L+ C L + + LI K GF ++ + LI + + SI+ + +VF+ + +
Sbjct: 48 AILLELCTSL---KELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEH 104
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKV 336
V ++++LK YA + ++A++ + M V P F LL ++ G ++
Sbjct: 105 KLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREI 164
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H M+ +G L +V+L + +I +A K+ MP + D V W+ ++ ++G
Sbjct: 165 -HGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP-QRDLVSWNTVVAGYAQNG 222
Query: 397 ETRLAE----------------------LAATKLKQLEPGDSL-------GFVQMSNI-- 425
R A A LK L G S+ GF M N+
Sbjct: 223 FARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVAT 282
Query: 426 -----YCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
Y GS ARL+ K M V +SW + +A G+ K
Sbjct: 283 AMLDTYFKCGSVRSARLVFKGMSSRNV-----VSW---NTMIDGYAQNGESEEAFATFLK 334
Query: 481 KLEE 484
L+E
Sbjct: 335 MLDE 338
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 330/557 (59%), Gaps = 31/557 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+V I++Y+K G + LF E K ++V++ A+I GY +G E LF L+
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-- 314
Query: 103 FFPNEFSLASVLISCDYLHGKL-----VHALALKFSLDAHVYVANALINMYSK-SCADEA 156
+S L+S + G L +H LK + +H V+ AL +YSK + + A
Sbjct: 315 -LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
K+F+ +++ SWN+MI+ + L E+A+ LFR++Q+ +P+
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLT-------------EDAISLFREMQKSEFSPNP 420
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T + +L ACA L VH L+ FE ++ ALI YA+CGSI+ ++++FD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
MT + V+WN+++ Y LHGQ +EAL +F M + P TF+ +L ACSHAGLV+EG
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+++F+SM+ +G P + HYACMVD+LGR G + A + I M +EP S +W LLG+CR
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 394 KHGETRLAELAATKLKQLEPGDSLGF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPG 452
H +T LA + KL +L+P D++G+ V +SNI+ ++ +A +R+ K ++ K PG
Sbjct: 601 IHKDTNLARTVSEKLFELDP-DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 453 LSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE 512
+ IEI H F SG + HPQ + I++KLE+L G+++ GY PET LALHD+EEE +E
Sbjct: 660 YTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEEREL 719
Query: 513 QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
+ HSE+LA+ F ++ + IRI+KN+R+C+DCH KL S + + IVVRD+
Sbjct: 720 MVKVHSERLAIAFGLIA----TEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDA 775
Query: 573 NRFHHFKDRICSCNDYW 589
NRFHHFKD +CSC DYW
Sbjct: 776 NRFHHFKDGVCSCGDYW 792
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 167/390 (42%), Gaps = 31/390 (7%)
Query: 20 NIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
+I Q H +I + F N D+ + L + G + AR +F + + +V +
Sbjct: 32 SISHLAQTHAQIILHGFRN---DISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 79 LISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHGKLVHALALKF 132
L+ G++ + + +F L + PN + A + + D G+++H A+
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 133 SLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
D+ + + + ++ MY K ++A KVF+ M ++ I WN+MI+ +R ++ ++I++F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+ NE D T +L A A L R +HSL K G
Sbjct: 209 RDLINESCTRL------------DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ I Y++CG I + +F + D+V++N+++ Y +G+ + +L LF +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+ S+T VSL+ H L+ H + + + ++ I
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIY----AIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
A KL E P E W+ ++ ++G T
Sbjct: 373 ARKLFDESP-EKSLPSWNAMISGYTQNGLT 401
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA G + +H+ ++ + E ++V+ LI MYAK G + +AR LFD M K
Sbjct: 426 ILSACAQLGALSLGKWVHD-LVRSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLV 125
+N V+W +ISGY HG +E +F +L P + VL +C H LV
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS--HAGLV 537
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 335/556 (60%), Gaps = 27/556 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V LI++YAK G ++ ARHLFD M ++V++ ALISGY+ +G LF L+
Sbjct: 258 VVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMG 317
Query: 104 F-PNEFSLASVL-ISCDYLHGKL---VHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
P+ +L +++ + + H L +HA +K LDA+ V+ AL +Y + + D A
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+ F+ M + + SWN+MI+ + A+ E A+ LF+Q+Q + P+
Sbjct: 378 RAFDAMPEKTMESWNAMISGY-------------AQNGLTEMAVALFQQMQALNVRPNPL 424
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T S L ACA L VH +IA E + + ALI Y +CGSI+ ++ +FD M
Sbjct: 425 TISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSM 484
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
++VSWN ++ Y LHGQ EAL+L+ +M ++ P S+TF+S+L ACSH GLV+EG
Sbjct: 485 DNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGT 544
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP-DSVIWSVLLGSCR 393
VF SM ++G+ P ++H CMVDLLGR G++ EA +LI E P IW LLG+C
Sbjct: 545 TVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACM 604
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H + LA+LA+ KL +LEP ++ +V +SN+Y +++A ++R+E K ++ K PG
Sbjct: 605 VHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGC 664
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
+ IEI +R H F +G + HPQ +AI+ LE+L ++ GY P+T AL+D+EEE KE
Sbjct: 665 TLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHM 724
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
+ HSEKLA+ F ++N + IRI+KN+R+C+DCHN K+ S + + IVVRD++
Sbjct: 725 VKVHSEKLAIAFGLLNT----EPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDAS 780
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF+D +CSC DYW
Sbjct: 781 RFHHFRDGVCSCGDYW 796
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 174/366 (47%), Gaps = 27/366 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV + L +Y +DAR +FD +P + V W L++G + E R+ +
Sbjct: 157 DNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEALEAFVRMAGA-- 214
Query: 101 QYFFPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE- 155
P+ +LASVL + + G+ VHA K L H +V LI++Y+K C D
Sbjct: 215 GSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAK-CGDME 273
Query: 156 -AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A +F+ ME +++++N++I+ + + ++E LF++L G+ P
Sbjct: 274 CARHLFDRMEGPDLVTYNALISGYSINGMVGSSVE-------------LFKELVGMGLRP 320
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T ++ + E A +H+ + K G + + ++ AL Y R + +++ F
Sbjct: 321 SSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAF 380
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M + SWN+++ YA +G + A+ LF M NV+P+ T S LSAC+ G +
Sbjct: 381 DAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALS 440
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G K H ++ N + + ++D+ + G I EA + M + + V W+V++
Sbjct: 441 LG-KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK-NVVSWNVMISG 498
Query: 392 CRKHGE 397
HG+
Sbjct: 499 YGLHGQ 504
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 47/305 (15%)
Query: 123 KLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +HALA+ A +VA+AL +Y + S ++A KVF+ + + + WN+++A
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSG- 201
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++A+E F +M + PD T + VL A A + VH+
Sbjct: 202 ---SEALEAFVRMAGAGS------------VRPDSTTLASVLPAAAEVANTTMGRCVHAF 246
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G + LI YA+CG + ++ +FD+M DLV++N+++ Y+++G +
Sbjct: 247 GEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSS 306
Query: 302 LQLFS---NMNVQPDSATFVSL-----------LSACSHAGLVQEGNKVFHSMLENHGVV 347
++LF M ++P S+T V+L L+ C HA +V+ G + N V
Sbjct: 307 VELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG------LDANAPVS 360
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
L C + + R +A + E ME W+ ++ ++G L E+A
Sbjct: 361 TALTTLYCRFNDMDSARRAFDA---MPEKTMES----WNAMISGYAQNG---LTEMAVAL 410
Query: 408 LKQLE 412
+Q++
Sbjct: 411 FQQMQ 415
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/591 (36%), Positives = 342/591 (57%), Gaps = 28/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G + Q+H +I + +++V + LI+MYAK G LD AR +
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKS--GFQFNVYVCSVLIDMYAKHGELDTARGILQR 475
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
+ + +VVSWTA+I+GY QH E +LF + Q + +S + +C + G
Sbjct: 476 LREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +HA + + + NAL+++Y++ A +A+ FE ++ ++ ISWN++I+ F
Sbjct: 536 QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGF--- 592
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ + EEAL +F Q+ + G+ + TF + A A + +H++
Sbjct: 593 ----------AQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAM 642
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G++ +T +N LI Y++CGSI +K+ F +M ++VSWN+++ Y+ HG EA
Sbjct: 643 MIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEA 702
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ LF M + P+ TFV +LSACSH GLV EG F SM + HG+VP+ +HY C+VD
Sbjct: 703 VSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVD 762
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR + A + I EMP+EPD++IW LL +C H + E AA L +LEP DS
Sbjct: 763 LLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSAT 822
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SN+Y +SG ++ R+ MK V+K PG SWIE++N +H F G + HP E I
Sbjct: 823 YVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQI 882
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
++ +++L + +GYV + L+D+E+E K+ Y HSEKLA+ F +++
Sbjct: 883 YEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLS----LTNTM 938
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN+R+C DCHN++K S + + IVVRD+ RFHHF+ +CSC DYW
Sbjct: 939 PIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 195/397 (49%), Gaps = 29/397 (7%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
+ Q Y LF C G++ A +LH + + F E + + LI++Y G +D+A
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGED---VLGSRLIDIYLAHGEVDNAI 65
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD--- 118
LFD++P NV W +ISG A + LF ++ + P+E + ASVL +C
Sbjct: 66 KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125
Query: 119 --YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMI 175
+ + +HA + + V N LI++YSK+ D A VFE + ++ +SW +MI
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ ++ E+EA+ LF Q+ + + P FS VL AC + +
Sbjct: 186 SGL-------------SQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG 232
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H I K+G +T + NAL+ Y+R G++ ++Q+F KM D +S+NS++ A
Sbjct: 233 EQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQR 292
Query: 296 GQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G + ALQLF M + +PD T SLLSAC+ G +G K HS + G+ L
Sbjct: 293 GFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKG-KQLHSYVIKMGMSSDLII 351
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++DL + I A + E + V+W+V+L
Sbjct: 352 EGSLLDLYVKCFDIETAHEYFLTTETE-NVVLWNVML 387
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 203/414 (49%), Gaps = 28/414 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+++++ AC K QLH ++ + FV N L+ +Y+++G L A +F
Sbjct: 215 VFSSVLSACTKIELFKLGEQLHGFIVK--WGLSSETFVCNALVTLYSRWGNLIAAEQIFS 272
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----H 121
+M +R+ +S+ +LISG AQ G ++ +LF + L P+ ++AS+L +C +
Sbjct: 273 KMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
GK +H+ +K + + + + +L+++Y K C D A + F E NV+ WN M+ A+
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVK-CFDIETAHEYFLTTETENVVLWNVMLVAY- 390
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
++ N E+ ++F Q+Q EG+ P+ T+ +L+ C L +H
Sbjct: 391 ------------GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH 438
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K GF+ + + + LI YA+ G + ++ + ++ D+VSW +++ Y H
Sbjct: 439 TQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA 498
Query: 300 EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL+LF N ++ D+ F S +SAC+ + +G ++ H+ G L +
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI-HAQSYISGYSEDLSIGNAL 557
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
V L R GR +A L E D++ W+ L+ + G A +++ Q
Sbjct: 558 VSLYARCGRAQDA-YLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQ 610
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
++ G+ + T+ + + C + A +H+ I K GF+ + V+ + LI Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ + ++FD + ++ WN ++ A + L LFS M NV PD +TF S+L A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
CS + + H+ + +HG ++DL + G + + KL+ E DSV
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHV-DLAKLVFERLFLKDSV 179
Query: 384 IWSVLLGSCRKHG 396
W ++ ++G
Sbjct: 180 SWVAMISGLSQNG 192
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/595 (37%), Positives = 350/595 (58%), Gaps = 29/595 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ ++Y T ACA N++ A ++H H+ ++ D F+ N LI++Y K G + +AR
Sbjct: 50 TPRVYHTFITACAQSKNLEDARKVHAHLASS--RFAGDAFLDNSLIHLYCKCGSVLEARK 107
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----D 118
+FDEM ++++VSWT+LI+GYAQ+ EE L +L+ F PN F+ AS+L + D
Sbjct: 108 VFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHAD 167
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
G+ +HALA+K VYV +AL++MY++ D A VF+ ++ +N +SWN++I+
Sbjct: 168 SGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISG 227
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F A+ + E AL F ++ R G T+S V + A L
Sbjct: 228 F-------------ARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKW 274
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH+ + K + N L+ YA+ GS+ +++VFD++ DLV+WN++L A+A +G
Sbjct: 275 VHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGL 334
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
KEA+ F M + + TF+ +L+ACSH GLV+EG + F M++ + + P++DH+
Sbjct: 335 GKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHFV 393
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
+V LLGR G + A I +MP+EP + +W LL +CR H ++ + AA + +L+P
Sbjct: 394 TVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPD 453
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
DS V + NIY +G ++ A +R+ MK + V+K P SW+E+EN VH F + HP+
Sbjct: 454 DSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPR 513
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
E I+K ++ +++ GYVP+ L ++++ +E L +HSEKLAL FA++ +
Sbjct: 514 AEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPA-- 571
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRIMKNIRIC DCH+ K S + G+EIVVRD+NRFHHF + CSC DYW
Sbjct: 572 --GATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+AP + + ACA A VH+ +A F D + N+LIH Y +CGS+ ++
Sbjct: 47 LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VFD+M D+VSW S++ YA + +EA+ L M +P+ TF SLL A
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHY------ACMVDLLGRVGRILEAEKLIREMPMEPDS 382
G ++ H + + D + + ++D+ R G + A + ++ + +
Sbjct: 167 DSGIGRQI-------HALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSK-NG 218
Query: 383 VIWSVLL-GSCRK-HGETRLAELA 404
V W+ L+ G RK GET L A
Sbjct: 219 VSWNALISGFARKGDGETALMTFA 242
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/596 (37%), Positives = 348/596 (58%), Gaps = 31/596 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ ++Y ACA N+ A ++H H+ ++ D F+ N LI++Y K G + +A
Sbjct: 50 TPRVYHAFITACAQSKNLDDARKIHGHLASS--RFEGDAFLDNSLIHLYCKCGSVVEAHK 107
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----D 118
+FD+M K+++VSWT+LI+GYAQ+ E L +L+ F PN F+ AS+L + D
Sbjct: 108 VFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYAD 167
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G +HALA+K VYV +AL++MY++ C D A VF+ ++ +N +SWN++I+
Sbjct: 168 SGIGGQIHALAVKCDWHEDVYVGSALLDMYAR-CGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F A+ + E AL +F ++QR G T+S + AG+
Sbjct: 227 GF-------------ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGK 273
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH+ + K + + N ++ YA+ GS+ +++VF+++ DLV+WNS+L A+A +G
Sbjct: 274 WVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
KEA+ F M + + TF+ +L+ACSH GLV+EG F M++ + + P+++HY
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYF-DMIKEYNLEPEIEHY 392
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+VDLLGR G + A I +MPMEP + +W LL +CR H ++ + AA + QL+P
Sbjct: 393 VTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP 452
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
DS V + NIY +G ++ A +RK MK + V+K P SW+EI N VH F + HP
Sbjct: 453 DDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHP 512
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ E I+K +E+ +++ GYVP+ L ++E+ +E L +HSEK+AL FA++ +
Sbjct: 513 RAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPA- 571
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRIMKNIRIC DCH+ K S + +EIVVRD+NRFHHF + CSC DYW
Sbjct: 572 ---GATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+AP + + ACA A +H +A FE D + N+LIH Y +CGS+ +
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VFDKM D+VSW S++ YA + EA+ L M +P+ TF SLL A
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHY------ACMVDLLGRVGRILEAEKLIREMPMEPDS 382
G ++ H + + D + + ++D+ R G++ A + ++ +
Sbjct: 167 DSGIGGQI-------HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNG 218
Query: 383 VIWSVLL-GSCRK-HGETRLAELAATKLKQLE 412
V W+ L+ G RK GET L A + E
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRNGFE 250
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/564 (40%), Positives = 338/564 (59%), Gaps = 32/564 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V L+ MY G +D AR FD +P +N+VSW A+++ Y +G A E LF ++
Sbjct: 374 DVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMK 433
Query: 100 LQYFFPNEFSLASVLISC-DYLHGKLVHALALKFSLDAH-VYVANALINMYSKSCA-DEA 156
Q PN+ S +VL C D + +HA + L A +AN ++ M+++S + +EA
Sbjct: 434 RQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEA 493
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
F+ ++ +SWN+ +AA A ++ A+ F +Q EG PD
Sbjct: 494 VAAFDATVVKDSVSWNTKVAALSA-------------REDLHGAITAFYTMQHEGFRPDK 540
Query: 217 CTFSIVLKACAGLVT-ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS-ISLSKQVF 274
T V+ CA L T E S L A E D V+A+A+++ A+CGS + +++F
Sbjct: 541 FTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLF 600
Query: 275 DKMT--YHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAG 328
+M DLV+WN+++ AYA HG ++AL+LF M +V+PDS+TFVS+LS CSHAG
Sbjct: 601 ARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAG 660
Query: 329 LVQEGNKVFHSMLENHGVVPQ-LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
LV++G F E G+ Q ++HYAC+VD+LGR+G + EAE IR+MP+ DSV+W+
Sbjct: 661 LVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTS 720
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LLG+C +G+ E AA +L DS+G+V +SNIY +G + + +R++M RV
Sbjct: 721 LLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRV 780
Query: 448 RK-YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
+K PG S I ++NRVHEF + + HPQ +AI+ +LE L G ++ GYVP+T L LHD+E
Sbjct: 781 KKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVE 840
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE KE+ L++HSEKLA+ F +++ R IR++KN+R+C DCH K + + +E
Sbjct: 841 EEQKEQLLWYHSEKLAIAFGLIS----VPHRHSIRVIKNLRVCKDCHTATKFIARVTQRE 896
Query: 567 IVVRDSNRFHHF-KDRICSCNDYW 589
I VRD NRFHHF KD CSC DYW
Sbjct: 897 IAVRDCNRFHHFGKDGECSCGDYW 920
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 42/444 (9%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
+I QA +H+ + + + +DLFV L++ Y K G ++ A +F + +++ W A
Sbjct: 150 SIAQARIVHDDIRGS--DLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAA 207
Query: 80 ISGYAQHGNAEECFRLFCSL----LQYFFPNEFSLASVLISCDYLHGKL-----VHALAL 130
I A GN E R + L+ PN S ++L SC H L +HA
Sbjct: 208 IMACA--GNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGD-HSSLPLARSIHARVE 264
Query: 131 KFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
+ V VA AL+ MY + DE+ VFE M RN +SWN+MIAAF C + A
Sbjct: 265 ELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFA 324
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER--HASAVHSLIAKYGF 247
++ +M Q+EG P+ TF LKA ++ ++A+H IA G
Sbjct: 325 IYWRM-------------QQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGL 371
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E D ++ AL+ Y G+I ++ FD + ++VSWN++L AY +G+A+EA++LF+
Sbjct: 372 EGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAA 431
Query: 308 MNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA-CMVDLLGRV 363
M Q P+ +++++L C V E + H+ + +G+ Q A +V + R
Sbjct: 432 MKRQSLAPNKVSYLAVLGCCED---VSEARSI-HAEVVGNGLFAQESSIANGVVRMFARS 487
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
G + EA + + DSV W+ + S R+ + + + P D V
Sbjct: 488 GSLEEAVAAF-DATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRP-DKFTLVS 545
Query: 422 MSNIYCLSGSFNKARLIRKEMKGS 445
+ ++ G+ R I++++ +
Sbjct: 546 VVDVCADLGTLELGRSIQQQLSAA 569
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 194/433 (44%), Gaps = 43/433 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ A L C ++ Q QLH ++ ++ + N+L+ MY+K LDDA F
Sbjct: 25 ETLAGLLRRCIGDADLAQGRQLHRQIVKQ--GLARNDLLGNYLVQMYSKCRSLDDANAAF 82
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL----LQYFFPNEFSLASVLISC---- 117
+ R + +W LI A + F L+ + PN+ ++ +VL +
Sbjct: 83 SALRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGD 139
Query: 118 ----------DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFR 166
++VH L+ ++VA AL++ Y K C + A +VF ++
Sbjct: 140 PSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVP 199
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
++I WN AA AC + + AL L R++ EG+ P+ +F +L +C
Sbjct: 200 DLICWN---AAIMACA---------GNDERPDRALLLVRRMWLEGLLPNRASFVAILSSC 247
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
+ A ++H+ + + GF D V+A AL+ Y RCGS+ S VF+ M + VSWN
Sbjct: 248 GDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWN 307
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL-SACSHAGLVQEGNKVFHSMLE 342
+++ A+A G A ++ M +P+ TFV+ L +ACS + + H +
Sbjct: 308 AMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIA 367
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA- 401
G+ + +V + G G I A +P + + V W+ +L + +G R A
Sbjct: 368 CAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK-NIVSWNAMLTAYGDNGRAREAM 426
Query: 402 EL-AATKLKQLEP 413
EL AA K + L P
Sbjct: 427 ELFAAMKRQSLAP 439
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 44/348 (12%)
Query: 20 NIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
++ +A +H ++ N F E + N ++ M+A+ G L++A FD ++ VSW
Sbjct: 453 DVSEARSIHAEVVGNGLFAQESS---IANGVVRMFARSGSLEEAVAAFDATVVKDSVSWN 509
Query: 78 ALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLV-HALALK 131
++ + + F ++ + F P++F+L SV+ C L G+ + L+
Sbjct: 510 TKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAA 569
Query: 132 FSLDAHVYVANALINMYSK--SCADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQA 187
++ V VA+A++NM +K S DE ++F M + +++++WN+MIAA
Sbjct: 570 IEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA---------- 619
Query: 188 IELFAKMKNEEEALFLFRQL-QREGMAPDWCTFSIVLKAC--AGLVTERHASAVHS-LIA 243
+A+ + +AL LFR + QR + PD TF VL C AGLV + +H +A
Sbjct: 620 ---YAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVED----GIHCFFLA 672
Query: 244 K--YGFEDDTVIANA-LIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKAYALHGQ-- 297
+ G E V A L+ R G + ++ KM D V W S+L A + +G
Sbjct: 673 REVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLE 732
Query: 298 -AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
+ A + F + + DS +V L + + AG ++ +V M E
Sbjct: 733 GGERAARAFIEL-YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERR 779
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/600 (37%), Positives = 340/600 (56%), Gaps = 39/600 (6%)
Query: 22 KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALIS 81
+A + +++ PN+ DL T ++ Y + G + AR +F+E+ + V W A+IS
Sbjct: 210 PEATRDARKVLDEMPNK-DDLTWTTMVVG-YVRRGDVGAARSVFEEVDGKFDVVWNAMIS 267
Query: 82 GYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCD----YLHGKLVHA----LALKF 132
GY G A E F LF ++ P +EF+ SVL +C + HGK VH L F
Sbjct: 268 GYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNF 327
Query: 133 SLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+A + V NAL+ YSK C + A ++F+NM ++V+SWN++++ + +A+E+
Sbjct: 328 VPEAALPVNNALVTFYSK-CGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEV 386
Query: 191 FAKM--KNE----------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
F +M KNE E+AL LF +++ E + P T++ + AC L
Sbjct: 387 FEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGAL 446
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+H +H I + GFE NALI YARCG++ + +F M D VSWN+++ A
Sbjct: 447 KHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISAL 506
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
HG +EAL+LF M + PD +F+++L+AC+H+GLV EG + F SM + G++P
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPG 566
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
DHY ++DLLGR GRI EA LI+ MP EP IW +L CR G+ L AA +L
Sbjct: 567 EDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF 626
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
++ P ++ +SN Y +G + A +RK M+ V+K PG SWIE N+VH F G
Sbjct: 627 KMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGD 686
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
+HP+ ++K LE + +++ +GYVP+T + LHD+E KE L+ HSE+LA+ F ++N
Sbjct: 687 TKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLN 746
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + ++KN+RIC DCH + S +G+EIVVRD RFHHFKD CSC +YW
Sbjct: 747 ----LPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 195/437 (44%), Gaps = 73/437 (16%)
Query: 35 FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEEC 92
F +P + T+ L+ YA L A FD +P +R+ V A+IS YA+ +A
Sbjct: 82 FCADPCPVSATS-LVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPA 140
Query: 93 FRLFCSLLQY--FFPNEFSLASVLISCDYL------HGKLVHALALKFSLDAHVYVANAL 144
+F SLL P+++S ++L + +L H +H LK + V NAL
Sbjct: 141 VAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNAL 200
Query: 145 INMYSKSCADEAW----KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--- 197
+ +Y K + EA KV + M ++ ++W +M+ + A +F ++ +
Sbjct: 201 VALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDV 260
Query: 198 ---------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
EA LFR++ E + D TF+ VL ACA + H +VH I
Sbjct: 261 VWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQI 320
Query: 243 AK----YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA----- 293
+ + E + NAL+ Y++CG+I++++++FD MT D+VSWN+IL Y
Sbjct: 321 IRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCL 380
Query: 294 -------------------------LHGQ-AKEALQLFSNM---NVQPDSATFVSLLSAC 324
+HG A++AL+LF+ M NV+P T+ ++AC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAAC 440
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
G ++ G K H + G ++ + R G + EA + MP DSV
Sbjct: 441 GELGALKHG-KQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP-NIDSVS 498
Query: 385 WSVLLGSCRKHGETRLA 401
W+ ++ + +HG R A
Sbjct: 499 WNAMISALGQHGHGREA 515
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
YA AC G +K QLH H++ F N LI MYA+ G + +A +F
Sbjct: 433 YAGAIAACGELGALKHGKQLHGHIVQLGFEGSNS---AGNALITMYARCGAVKEAHLMFL 489
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
MP + VSW A+IS QHG+ E LF ++ + +P+ S +VL +C+ H LV
Sbjct: 490 VMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN--HSGLV 547
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVIS-WNSMIA 176
++ F + LI++ ++ EA + + M F S W ++++
Sbjct: 548 DEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607
Query: 177 AFRAC---KLEAQAIELFAKMKNEEEALFLF 204
R +L A A + KM + + ++
Sbjct: 608 GCRTSGDMELGAHAADQLFKMTPQHDGTYIL 638
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/552 (39%), Positives = 334/552 (60%), Gaps = 31/552 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPN 106
LI+M+ + L+ AR +F+EM +VVSWTA++S A++ + +E LF + L+ P+
Sbjct: 578 LISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPD 637
Query: 107 EFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVF 160
+F+LA+ L +C GK++HA + L+A + V NAL+NMYS +C D EA F
Sbjct: 638 KFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYS-NCGDWREALSFF 696
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E M+ R+++SWN M AA+ A+ +EA+ LFRQ+Q EG+ PD TFS
Sbjct: 697 ETMKARDLVSWNIMSAAY-------------AQAGLAKEAVLLFRQMQLEGVKPDKLTFS 743
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
L G H+L A+ G + D +A L+ YA+CG + + +F
Sbjct: 744 TTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDW 803
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+V N+I+ A A HG ++EA+++F M V+PD AT VS++SAC HAG+V+EG F
Sbjct: 804 TVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSF 863
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+M E G+ P L+HYAC VDLLGR G++ AE++IR+MP E ++++W+ LLG+C+ G+
Sbjct: 864 LTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGD 923
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
L E A ++ +L+P +S V +SNIYC +G + A + RK+M V+ PG+SW E
Sbjct: 924 AELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFE 983
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHH 517
I +VHEF +G + HP+ + I+ L++L ++ GY + L D+E+E KE+ L +H
Sbjct: 984 IGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGL---DVEDELKEKALGYH 1040
Query: 518 SEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHH 577
SE++A+ F ++ + ++I+KN+R+C DCH K S ++G+EI+VRDS RFHH
Sbjct: 1041 SERIAIAFGLIAT----PPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHH 1096
Query: 578 FKDRICSCNDYW 589
F + CSC D W
Sbjct: 1097 FSNGTCSCKDCW 1108
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 205/403 (50%), Gaps = 34/403 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y L +C ++ + HE + N Q LF+ N LINMY + G L++A +F
Sbjct: 26 QEYTALLQSCVDSNDLAKGKHAHELIAN--AGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DY 119
+M +RNVVSWTALIS AQ G F LF ++L PN ++L ++L +C D
Sbjct: 84 SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 120 LHGKLVHALALKFSLD----AHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
G+ +HA+ + L+ V NA+INMY+K + ++A VF + ++V+SW +M
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAM 203
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
A+ AQ + +AL +FR++ + +AP+ TF L AC L R
Sbjct: 204 AGAY------AQERRFY------PDALRIFREMLLQPLAPNVITFITALGACTSL---RD 248
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH---DLVSWNSILKA 291
+ +HSL+ + D + +NALI+ Y +CG + VF M DLVSWN+++ A
Sbjct: 249 GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISA 308
Query: 292 YALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
G+ +A+ +F + ++ P+S T +++L+A + +G+ + FH + G +
Sbjct: 309 SVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLR 368
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ ++ + + G A + R + + D + W+ +LG+
Sbjct: 369 DVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 186/413 (45%), Gaps = 35/413 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFC- 97
+D+ + N +I+MYAK G+ A +F + K +V+SW ++ + + F
Sbjct: 368 RDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHH 427
Query: 98 SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLD-AHVYVANALINMYSKSC 152
LL PN+ S ++L +C G+ +H+L L D VA L++MY K
Sbjct: 428 MLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCG 487
Query: 153 A-DEAWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+ EA VF+ M R++++WN M+ A+ A+ +EA ++ +
Sbjct: 488 SISEAELVFKEMPLPSRSLVTWNVMLGAY-------------AQNDRSKEAFGALMEMLQ 534
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
G+ PD +F+ VL +C + A + I + G+ + ALI + RC +
Sbjct: 535 GGVLPDALSFTSVLSSC---YCSQEAQVLRMCILESGYRS-ACLETALISMHGRCRELEQ 590
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSH 326
++ VF++M + D+VSW +++ A A + KE LF M ++ PD T + L C
Sbjct: 591 ARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLA 650
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+ + G KV H+ + G+ + ++++ G EA M D V W+
Sbjct: 651 STTLGLG-KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR-DLVSWN 708
Query: 387 VLLGSCRKHGETRLAEL--AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
++ + + G + A L +L+ ++P D L F N+ S + +L
Sbjct: 709 IMSAAYAQAGLAKEAVLLFRQMQLEGVKP-DKLTFSTTLNVSGGSALVSDGKL 760
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 25/269 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V N L+NMY+ G +A F+ M R++VSW + + YAQ G A+E LF +
Sbjct: 672 DIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQ 731
Query: 100 LQYFFPNEFSLASVL----ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
L+ P++ + ++ L S GKL HALA + LD+ V VA L+ +Y+K C
Sbjct: 732 LEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAK-CGKL 790
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
DEA +F V+ N++I A A+ EEA+ +F ++Q+EG+
Sbjct: 791 DEAMSLFRGACDWTVVLLNAIIGA-------------LAQHGFSEEAVKMFWKMQQEGVR 837
Query: 214 PDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
PD T ++ AC AG+V E S+ ++ +G + R G + ++
Sbjct: 838 PDVATLVSIISACGHAGMV-EEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAE 896
Query: 272 QVFDKMTYHD-LVSWNSILKAYALHGQAK 299
Q+ KM + D + W S+L L G A+
Sbjct: 897 QIIRKMPFEDNTLVWTSLLGTCKLQGDAE 925
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 209 REGMAPDWCTFSIVLKACAG---LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
R A D ++ +L++C L +HA H LIA G E + N LI+ Y RCG
Sbjct: 18 RVDRAADLQEYTALLQSCVDSNDLAKGKHA---HELIANAGLEQHLFLGNCLINMYVRCG 74
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLL 321
S+ + +F KM ++VSW +++ A A G A LF M + P+S T V++L
Sbjct: 75 SLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAML 134
Query: 322 SACSHAGLVQEGNKVFHSM-----LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
+AC+++ + G + H+M LE L A M+++ + G + +A + +
Sbjct: 135 NACANSRDLAIGRSI-HAMIWELGLERASTTATLVGNA-MINMYAKCGSLEDAIAVFLAI 192
Query: 377 PMEPDSVIWSVLLGS 391
P E D V W+ + G+
Sbjct: 193 P-EKDVVSWTAMAGA 206
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 333/572 (58%), Gaps = 31/572 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ N L++ Y ++G + +AR LFD MP R+VVSW ++SGYA+ G+ E RLF +
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMY-SKSCADEAWK 158
+ F+ +V +S +G L A + ++ V+ NA++ Y + DEA +
Sbjct: 252 ---VRDVFTWTAV-VSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKE 307
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEA 200
+F M RNV SWN+M+ + + +A +F M + EE
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LF ++ R G + F+ VL CA + +H + + G+ + NAL+
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
Y +CG++ ++ F++M D+VSWN+++ YA HG KEAL++F M + +PD T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
V +L+ACSH+GLV++G F+SM + GV + +HY CM+DLLGR GR+ EA L+++MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
EPDS +W LLG+ R H L AA K+ +LEP ++ +V +SNIY SG + AR
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607
Query: 438 IRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPE 497
+R M+ V+K PG SWIE++N+VH F++G HP++E I+ LE+L ++K GYV
Sbjct: 608 MRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSA 667
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T + LHD+EEE KE L +HSEKLA+ + I+N IR++KN+R+C DCHN K
Sbjct: 668 TDMVLHDVEEEEKEHMLKYHSEKLAVAYGILN----IPPGRPIRVIKNLRVCGDCHNAFK 723
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + G+ I++RDSNRFHHF+ CSC DYW
Sbjct: 724 YISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 65/393 (16%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
EP+ + +N I + + G + DA LF MP+R+ ++ A+++GY+ +G LF
Sbjct: 35 EPE-VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 98 SLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAW 157
++ + P+ +S + L+HALA+ S S AD A
Sbjct: 94 AIPR---PDNYS-----------YNTLLHALAV------------------SSSLAD-AR 120
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F+ M R+ +++N MI++ L + A F + E++A + GM +
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF-DLAPEKDA------VSWNGMLAAYV 173
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
V +A GL R E D + NAL+ Y + G +S ++++FD+M
Sbjct: 174 RNGRVEEA-RGLFNSRT-------------EWDVISWNALMSGYVQWGKMSEARELFDRM 219
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+VSWN ++ YA G EA +LF V+ D T+ +++S + G+++E +VF
Sbjct: 220 PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR-DVFTWTAVVSGYAQNGMLEEARRVF 278
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+M E + V + MV + + EA++L MP + W+ +L + G
Sbjct: 279 DAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTGYAQAG- 331
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+ E A + D++ + M Y G
Sbjct: 332 --MLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/593 (37%), Positives = 336/593 (56%), Gaps = 35/593 (5%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
AC+ +I Q H+ D+FV++ LI MY+ G L+DAR +FDE+PKR++
Sbjct: 85 ACSSLFDIFSGKQTHQQAF--VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDI 142
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLISCDYLHGK--- 123
VSWT++I GY +GNA + LF LL F + L SV+ +C + K
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 124 -LVHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFR 179
+H+ +K D V V N L++ Y+K A K+F+ + ++ +S+NS+++ +
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ +A E+F ++ + F + T S VL A + R +H
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTF------------NAITLSTVLLAVSHSGALRIGKCIH 310
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + G EDD ++ ++I Y +CG + +++ FD+M ++ SW +++ Y +HG A
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL+LF M V+P+ TFVS+L+ACSHAGL EG + F++M GV P L+HY CM
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCM 430
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + +A LI+ M M+PDS+IWS LL +CR H LAE++ +L +L+ +
Sbjct: 431 VDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNC 490
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ +S+IY +G + +R MK + K PG S +E+ VH F G + HPQRE
Sbjct: 491 GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I++ L EL +L GYV TS HD++EE KE L HSEKLA+ F IMN
Sbjct: 551 KIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT----VP 606
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + ++KN+R+C DCHN +KL S ++ +E VVRD+ RFHHFKD CSC DYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 171/346 (49%), Gaps = 31/346 (8%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
+ K +V SW ++I+ A+ G++ E F S+ + +P S + +C D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
K H A F + ++V++ALI MYS +C ++A KVF+ + R+++SW SMI +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYS-TCGKLEDARKVFDEIPKRDIVSWTSMIRGYDL 154
Query: 181 CKLEAQAIELFAKM----KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A+ LF + ++++A+FL D V+ AC+ + +
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFL-----------DSMGLVSVISACSRVPAKGLTE 203
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARC--GSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
++HS + K GF+ + N L+ AYA+ G +++++++FD++ D VS+NSI+ YA
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 295 HGQAKEALQLF----SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
G + EA ++F N V ++ T ++L A SH+G ++ G K H + G+ +
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDV 322
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + GR+ A K M + W+ ++ HG
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/588 (36%), Positives = 344/588 (58%), Gaps = 28/588 (4%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+F ACA G + LH + I + + F N L++MY+K G L+ A +F+ M +
Sbjct: 358 VFVACANIGTLLLGKVLHSYSIKAATLDREVRF-NNTLLDMYSKCGDLNSAIRVFERMDE 416
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLV 125
+ VVSWT++I+GY + G ++ +LF + + P+ +++ S+L +C + GK+V
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIV 476
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H + +L+ + +V+NAL +MY+K +A VF +M+ ++VISWN+MI + L
Sbjct: 477 HDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLP 536
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+A+ LFA+M+ E + PD T + +L ACA L +H +
Sbjct: 537 NEALTLFAEMQRESK--------------PDGTTVACILPACASLAALDKGREIHGYALR 582
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
G+ +D + NA++ Y +CG + L++ +FD + DLVSW ++ Y +HG EA+
Sbjct: 583 NGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINT 642
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F+ M ++PD +F+S+L ACSH+GL+ EG K+F+ M + + P L+HYACMVDLL
Sbjct: 643 FNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLA 702
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G +++A K I+ MP++PD+ IW LL CR H + +LAE A ++ +LEP ++ +V
Sbjct: 703 RTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVL 762
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
++NIY + + + + +RK++ ++K PG SWIEI+ +++ F +G PQ + I
Sbjct: 763 LANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELL 822
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L+ L ++K GY P+T+ AL + +E KE L HSEKLA+ F ++N IR
Sbjct: 823 LKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLN----LPPGKTIR 878
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ KN+R+C DCH K S +EI++RDS+RFHHFKD CSC YW
Sbjct: 879 VTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 186/401 (46%), Gaps = 33/401 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ CA +I+ ++ I D + L+ MY K G L + R +FD+
Sbjct: 153 YCSILQLCAERKSIRDGRRVRS--IIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDK 210
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVL----ISCDYLHG 122
+ + + W +IS Y+ GN E LF +L+ PN ++ +S+L G
Sbjct: 211 LSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEG 270
Query: 123 KLVHALALKFSLDAHVYVANALINMY----SKSCADEAWKVFENMEFRNVISWNSMIAAF 178
+ VH L K +++ V N+LI+ Y CA K+F+ + R+VISWNSMI+ +
Sbjct: 271 RQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQ---KLFDELTDRDVISWNSMISGY 327
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
L+ + IE+F KM +F G+ D T V ACA + T +
Sbjct: 328 VKNGLDDRGIEIFIKM-------LVF------GVDIDLATMVNVFVACANIGTLLLGKVL 374
Query: 239 HSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
HS K D V N L+ Y++CG ++ + +VF++M +VSW S++ Y G
Sbjct: 375 HSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGL 434
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+ A++LF M V PD S+L+AC+ G ++ G K+ H + + +
Sbjct: 435 SDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSN 493
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+ D+ + G + +A + M + D + W+ ++G K+
Sbjct: 494 ALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGGYTKN 533
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 161/329 (48%), Gaps = 29/329 (8%)
Query: 6 QIYA--TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+YA ++ +ACA++GN+K +H+++ N N + FV+N L +MYAK G + DA
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIREN--NLETNSFVSNALTDMYAKCGSMKDAHD 510
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL--- 120
+F M K++V+SW +I GY ++ E LF + + P+ ++A +L +C L
Sbjct: 511 VFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACILPACASLAAL 570
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H AL+ YV NA+++MY K A +F+ + ++++SW MIA +
Sbjct: 571 DKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGY 630
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHAS 236
++AI F Q++ G+ PD +F +L AC +GL+ E
Sbjct: 631 GMHGYGSEAIN-------------TFNQMRMTGIEPDEVSFISILYACSHSGLLDE--GW 675
Query: 237 AVHSLIAKY-GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYAL 294
+ +++ K E + ++ AR G++ + + M D W ++L +
Sbjct: 676 KIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRI 735
Query: 295 HGQAKEALQLFSNM-NVQPDSATFVSLLS 322
H K A ++ + ++P++ + LL+
Sbjct: 736 HHDVKLAEKVAERIFELEPENTGYYVLLA 764
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 136/296 (45%), Gaps = 30/296 (10%)
Query: 144 LINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEAL 201
L+ MY K C D E VF+ + + WN MI+ + N E++
Sbjct: 191 LVFMYVK-CGDLKEGRMVFDKLSESKIFLWNLMISEYSGSG-------------NYGESI 236
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
LF+Q+ G+ P+ TFS +LK A + VH LI K GF + N+LI Y
Sbjct: 237 NLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFY 296
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
+ ++++FD++T D++SWNS++ Y +G +++F M V D AT V
Sbjct: 297 FVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMV 356
Query: 319 SLLSACSHAGLVQEGNKVFHSM-LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
++ AC++ G + G KV HS ++ + ++ ++D+ + G + A ++ M
Sbjct: 357 NVFVACANIGTLLLG-KVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD 415
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
E V W+ ++ + G L+ +K + S G V ++Y ++ N
Sbjct: 416 -EKTVVSWTSMITGYVREG------LSDGAIKLFDEMKSRGVV--PDVYAVTSILN 462
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D + +L+ CA + R V S+I G D ++ L+ Y +CG + + VF
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
DK++ + WN ++ Y+ G E++ LF M ++P+S TF S+L + V+
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268
Query: 332 EGNKVFHSMLENHGVVPQL--DHYACMVDLLGR---VGRILE-AEKLIREMPMEPDSVIW 385
EG +V HG++ +L + Y +V+ L VGR + A+KL E+ + D + W
Sbjct: 269 EGRQV-------HGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELT-DRDVISW 320
Query: 386 SVLLGSCRKHG-ETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
+ ++ K+G + R E+ +K L G + M N++
Sbjct: 321 NSMISGYVKNGLDDRGIEIF---IKMLVFGVDIDLATMVNVF 359
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/572 (37%), Positives = 336/572 (58%), Gaps = 39/572 (6%)
Query: 34 NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE------MPKRNVVSWTALISGYAQHG 87
N N P + LI +++ +D+AR +F++ +P+ W A+ GY+++G
Sbjct: 104 NLLNNPT---LKGKLITLFSVCRRVDEARRVFEDGGEDVDLPES---VWVAMGIGYSRNG 157
Query: 88 NAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVAN 142
+E L+ ++ Q+ F+ + L +C D G+ VHA LK + D V N
Sbjct: 158 YPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNN 217
Query: 143 ALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEAL 201
AL+ +YS+ C DEA +VF+ M RNV+SWNS+IA K EA+
Sbjct: 218 ALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGL-------------VKKDGVFEAI 264
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
FR +Q +GM W T + +L CA + +H++I K + D + N+L+ Y
Sbjct: 265 EAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMY 324
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
A+CG++ ++VF+ M DL SWN+++ YA++G+ EA++ F M PD TF+
Sbjct: 325 AKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFI 384
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+LLS CSHAGL +G ++F M ++G+ P ++HYAC+VD+LGR GRI EA ++++ MP
Sbjct: 385 ALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPF 444
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
+P IW LL SCR HG LAE A +L +LEP ++ +V +SNIY +G + +++
Sbjct: 445 KPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVV 504
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL-EELIGQLKGMGYVPE 497
R+ M+ + K G SW++I++++H F +GG + +KK+ + L+ ++ +GYVP+
Sbjct: 505 REFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPD 564
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T + LHD+ EE + + HSE+LA +FA++N S IRI KN+R+CVDCH+++K
Sbjct: 565 TGVVLHDVSEEMRAMWVCGHSERLATMFALINTAS----GMPIRITKNLRVCVDCHSWVK 620
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + G+ IV+RD+NRFHHFKD +CSC DYW
Sbjct: 621 TLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/578 (38%), Positives = 335/578 (57%), Gaps = 33/578 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D FV L+ MYA G + +AR +FD+M R+VV+W+ +I GY Q G + LF +
Sbjct: 155 SDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEM 214
Query: 100 LQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
Y P+E L++VL +C + +GK++H ++ ++ ++ +AL+ MY+ SC
Sbjct: 215 KNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYA-SCGS 273
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM------------------ 194
D A +FE M +N+++ +M+ + A +F +M
Sbjct: 274 MDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAES 333
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
+ +EAL LF ++Q G+ PD T V+ ACA L A +H + K GF I
Sbjct: 334 DSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPIN 393
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
NALI YA+CGS+ ++++FDKM +++SW ++ A+A+HG A AL+ F M N++
Sbjct: 394 NALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIE 453
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P+ TFV +L ACSHAGLV+EG K+F+SM+ H + P+ HY CMVDL GR + EA +
Sbjct: 454 PNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALE 513
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
L+ MP+ P+ +IW L+ +CR HGE L E AA +L +L+P V +SNIY +
Sbjct: 514 LVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARR 573
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG 491
+ +RK MK + K G S E+ N +HEF + H + I++KL E++ +LK
Sbjct: 574 WEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKL 633
Query: 492 MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
+GY P T L D+EEE K+E + HSEKLAL + +M G+ S IRI+KN+R+C D
Sbjct: 634 VGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGT----GSCIRIIKNLRVCED 689
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH F+KLAS + +EIVVRD RFHH+KD +CSC DYW
Sbjct: 690 CHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 153/304 (50%), Gaps = 32/304 (10%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
H T++ +C G++ A+ L E M P++L + ++ Y+K G +++AR
Sbjct: 259 HLQSALVTMYASC---GSMDLALNLFEKMT------PKNLVASTAMVTGYSKLGQIENAR 309
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL- 120
+F++M K+++V W+A+ISGYA+ + +E LF + P++ ++ SV+ +C +L
Sbjct: 310 SVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLG 369
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIA 176
K +H K + + NALI MY+K + + A ++F+ M +NVISW MI+
Sbjct: 370 ALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMIS 429
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERH 234
A FA + AL F Q++ E + P+ TF VL AC AGLV E
Sbjct: 430 A-------------FAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGR 476
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKAYA 293
+S+I ++ V ++ + R + + ++ + M +++ W S++ A
Sbjct: 477 -KIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACR 535
Query: 294 LHGQ 297
+HG+
Sbjct: 536 VHGE 539
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 167/356 (46%), Gaps = 44/356 (12%)
Query: 109 SLASVLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCA-----DEAWKVFEN 162
+L S L S L H K VHA L+ LD + L+ + SCA D A VF
Sbjct: 25 TLFSALSSATSLTHLKQVHAQILRSKLDRSTSL---LVKLVISSCALSSSLDYALSVF-- 79
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELF----AKMKNEEEALFLFRQLQREGMAPDWCT 218
N+I K E F ++ + E+ L ++ +++ +G+A D +
Sbjct: 80 ----NLIP-----------KPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFS 124
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F +LKA + + + +H L AK GF+ D + L+ YA CG I+ ++ +FDKM
Sbjct: 125 FPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMF 184
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
+ D+V+W+ ++ Y G +AL LF M NV+PD ++LSAC AG + G
Sbjct: 185 HRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKM 244
Query: 336 VFHSMLENHGVV-PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ ++EN+ VV P L + +V + G + A L +M P +++ S + +
Sbjct: 245 IHDFIMENNIVVDPHLQ--SALVTMYASCGSMDLALNLFEKMT--PKNLVASTAMVT--- 297
Query: 395 HGETRLAEL--AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
G ++L ++ A + Q+ D + + M + Y S S +A + EM+ ++
Sbjct: 298 -GYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIK 352
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 325/559 (58%), Gaps = 29/559 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
F+ + L+ Y + G+ A LFDEMP+R++VSW +LISGY+ G +CF + ++
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 103 ---FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
F PNE + S++ +C Y G+ +H L +KF + V V NA IN Y K+
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ K+FE++ +N++SWN+MI L E+ L F +R G P
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLA-------------EKGLAYFNMSRRVGHEP 233
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D TF VL++C + R A +H LI GF + I AL+ Y++ G + S VF
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
++T D ++W ++L AYA HG ++A++ F M + PD TF LL+ACSH+GLV+
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F +M + + + P+LDHY+CMVDLLGR G + +A LI+EMPMEP S +W LLG+
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR + +T+L AA +L +LEP D +V +SNIY SG + A IR MK + +
Sbjct: 414 CRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRAS 473
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG-MGYVPETSLALHDIEEEHK 510
G S+IE N++H+F G HP+ E I KKL+E+ ++K MGY +T LHD+ E+ K
Sbjct: 474 GCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVK 533
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE + HSEK+A+ F ++ + E +IR KN+RIC DCH K S + + I++R
Sbjct: 534 EEMINQHSEKIAMAFGLLVVSPM--EPIIIR--KNLRICGDCHETAKAISLIEKRRIIIR 589
Query: 571 DSNRFHHFKDRICSCNDYW 589
DS RFHHF D CSC+DYW
Sbjct: 590 DSKRFHHFLDGSCSCSDYW 608
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 57/344 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC G+ ++ +H ++ F +++ V N IN Y K G L + LF++
Sbjct: 137 FLSMISACVYGGSKEEGRCIHG-LVMKF-GVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----G 122
+ +N+VSW +I + Q+G AE+ F S P++ + +VL SC+ +
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H L + + + AL+++YSK +++ VF + + ++W +M+AA+
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
AI+ F M + G++PD TF+ +L AC +GLV E
Sbjct: 315 GFGRDAIKHFELMVH-------------YGISPDHVTFTHLLNACSHSGLVEE------- 354
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQV-FDKMTYHDLVSWNSILKAYALHGQA 298
K+ FE ++SK+ D H ++ ++ G
Sbjct: 355 ---GKHYFE-------------------TMSKRYRIDPRLDH----YSCMVDLLGRSGLL 388
Query: 299 KEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
++A L M ++P S + +LL AC Q G K + E
Sbjct: 389 QDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFE 432
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/578 (37%), Positives = 333/578 (57%), Gaps = 29/578 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV ++MYA G ++ AR++FDEM R+VV+W +I Y + G +E F+LF +
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 101 QY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CAD 154
P+E L +++ +C + + + ++ ++ + ++ AL+ MY+ + C D
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---------------- 198
A + F M RN+ +M++ + C A +F + + ++
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 199 --EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
EAL +F ++ G+ PD + V+ ACA L A VHS I G E + I NA
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
LI+ YA+CG + ++ VF+KM ++VSW+S++ A ++HG+A +AL LF+ M NV+P+
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
TFV +L CSH+GLV+EG K+F SM + + + P+L+HY CMVDL GR + EA ++I
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
MP+ + VIW L+ +CR HGE L + AA ++ +LEP V MSNIY +
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
R IR+ M+ V K GLS I+ + HEF G KRH Q I+ KL+E++ +LK G
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAG 624
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS--VIRIMKNIRICVD 551
YVP+ L D+EEE K++ + HSEKLAL F +MN+ + S VIRI+KN+R+C D
Sbjct: 625 YVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCED 684
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH F KL S + +EI+VRD RFH +K+ +CSC DYW
Sbjct: 685 CHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 42/302 (13%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--- 96
++LFV+ +++ Y+K G LDDA+ +FD+ K+++V WT +IS Y + +E R+F
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 97 -CSLLQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS 151
CS ++ P+ S+ SV+ +C L K VH+ L++ + + NALINMY+K
Sbjct: 336 CCSGIK---PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKC 392
Query: 152 CA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D VFE M RNV+SW+SMI A + A+ LFA+MK +E
Sbjct: 393 GGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMK-------------QE 439
Query: 211 GMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ P+ TF VL C +GLV E S+ +Y ++ + R +
Sbjct: 440 NVEPNEVTFVGVLYGCSHSGLV-EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLR 498
Query: 269 LSKQVFDKMTY-HDLVSWNSILKAYALHGQ-------AKEALQLFSNMNVQPDSATFVSL 320
+ +V + M ++V W S++ A +HG+ AK L+L +PD + L
Sbjct: 499 EALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL------EPDHDGALVL 552
Query: 321 LS 322
+S
Sbjct: 553 MS 554
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 196 NEEEALFLFRQLQRE-GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
+E A LF Q R G D +F +LKA + + +H + K D +
Sbjct: 90 SEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVE 149
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
+ YA CG I+ ++ VFD+M++ D+V+WN++++ Y G EA +LF M NV
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEA 369
PD +++SAC G ++ ++ ++EN ++D + +V + G + A
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIEND---VRMDTHLLTALVTMYAGAGCMDMA 266
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL--AATKLKQLEPGDSLGFVQMSNIYC 427
+ R+M + ++ + + G ++ L A Q E D + + M + Y
Sbjct: 267 REFFRKMS------VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 428 LSGSFNKARLIRKEMKGSRVR 448
S +A + +EM S ++
Sbjct: 321 ESDYPQEALRVFEEMCCSGIK 341
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/611 (37%), Positives = 345/611 (56%), Gaps = 38/611 (6%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L S ++ A +G I A L + + +EP ++ N +I Y + +D+A
Sbjct: 318 LKSVPSRTSMLTGLARYGRIDDAKILFDQI-----HEP-NVVSWNAMITGYMQNEMVDEA 371
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL 120
LF+ MP RN +SW +I+GYA++G +E+ +L + P+ SL S +C +
Sbjct: 372 EDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNI 431
Query: 121 H----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
GK VH+LA+K + YV NALI +Y K ++F+ M ++ +S+NS +
Sbjct: 432 EALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFM 491
Query: 176 AAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWC 217
+A L +A ++F M + + EA+ +FR + E P+
Sbjct: 492 SALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPP 551
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+I+L L + +H++ K G + V+ANAL+ Y +C S S +VFD M
Sbjct: 552 ILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSM 610
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
D+ +WN+I+ YA HG +EA++++ M V P+ TFV LL ACSH+GLV EG+
Sbjct: 611 EERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGH 670
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM ++G+ P L+HYACMVDLLGR G + AE I +MP+EPDSVIWS LLG+C+
Sbjct: 671 QFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKI 730
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H + AA KL +EP ++ +V +SNIY G +++ +RK MK V K PG S
Sbjct: 731 HKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCS 790
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W++I+N++H F +G + H Q + I+ L EL LK GYVP+T LHDI+EE KE L
Sbjct: 791 WMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSL 850
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
+HSEKLA+ + ++ + + I+IMKN+RIC DCH F+K S + +EI VRD NR
Sbjct: 851 LYHSEKLAVAYGLL----VTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNR 906
Query: 575 FHHFKDRICSC 585
FHHF++ CSC
Sbjct: 907 FHHFRNGSCSC 917
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 189/423 (44%), Gaps = 84/423 (19%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
+G+I A +L + M + +D+ N ++ Y +++AR+LF+ MP+RN VSWT
Sbjct: 139 NGDITLARKLFDAMPS------RDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWT 192
Query: 78 ALISGYA---QHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL-----VHALA 129
+ISGY QHG A + FR L + P + +L SVL + +L GK +H L
Sbjct: 193 VMISGYVLIEQHGRAWDMFRTM--LCEGMTPEQPNLVSVLSAVRHL-GKPGILESIHVLV 249
Query: 130 LKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
K + V V A++N Y+K D A K FE M RN +W+++IAA A
Sbjct: 250 HKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDA 309
Query: 188 IELFAK--MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
++ + +K+ + L R G D A ++ ++ +H
Sbjct: 310 FAVYQRDPLKSVPSRTSMLTGLARYGRIDD-----------AKILFDQ----IH------ 348
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA---L 302
E + V NA+I Y + + ++ +F++M + + +SW ++ YA +G++++A L
Sbjct: 349 --EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSL 406
Query: 303 QLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLL 360
Q + P ++ S ACS+ ++ G +V HS+ G Q + Y C ++ L
Sbjct: 407 QALHRKGMLPSLSSLTSSFFACSNIEALETGKQV-HSLAVKAGC--QFNSYVCNALITLY 463
Query: 361 GR---VGRIL----------------------------EAEKLIREMPMEPDSVIWSVLL 389
G+ +G + EA + MP PD V W+ ++
Sbjct: 464 GKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP-SPDVVSWTTII 522
Query: 390 GSC 392
+C
Sbjct: 523 SAC 525
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 164/374 (43%), Gaps = 32/374 (8%)
Query: 49 INMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF 108
I + G L +AR +FD MP R++++W ++I Y +G + SL
Sbjct: 40 IRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGR----SLADAISGGNL 95
Query: 109 SLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMYSKSCADE-AWKVFENMEFR 166
++L+S G++ A + + VA NA++ Y ++ A K+F+ M R
Sbjct: 96 RTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSR 155
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQ 208
+V SWN+M+ + +L +A LF +M A +FR +
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR-CGSI 267
EGM P+ VL A L ++H L+ K GFE D V+ A+++ Y + +
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNML 275
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHA 327
+ + F+ M + +W++I+ A + G+ +A ++ ++ + S+L+ +
Sbjct: 276 DSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLK-SVPSRTSMLTGLARY 334
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G + + +F + E P + + M+ + + EAE L MP +++ W+
Sbjct: 335 GRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-NTISWAG 388
Query: 388 LLGSCRKHGETRLA 401
++ ++G + A
Sbjct: 389 MIAGYARNGRSEQA 402
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL---FSN 307
T +A I R G + +++VFD M + D+++WNS++ AY +G L S
Sbjct: 33 TSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISG 92
Query: 308 MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
N++ T LLS + AG V++ +VF M + V + MV + G I
Sbjct: 93 GNLR----TGTILLSGYARAGRVRDARRVFDGMGVRNTVA-----WNAMVTCYVQNGDIT 143
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 427
A KL MP S ++L G C ++L E A +++ + + + M + Y
Sbjct: 144 LARKLFDAMPSRDVSSWNTMLTGYC----HSQLMEEARNLFERMPERNGVSWTVMISGYV 199
Query: 428 L 428
L
Sbjct: 200 L 200
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/591 (38%), Positives = 339/591 (57%), Gaps = 29/591 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ C G+I AM +H ++I + DLFV+N LINMYAKFG L+DAR F +M
Sbjct: 320 VSILPVCPQLGDISTAMLIHLYVIKH--GLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLAS----VLISCDYLHGK 123
+VVSW ++I+ Y Q+ + F + L F P+ +L S V S D + +
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437
Query: 124 LVHALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH ++ L V + NA+++MY+K D A KVFE + ++VISWN++I +
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQN 497
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L ++AIE++ M+ +E + P+ T+ +L A A + + +H
Sbjct: 498 GLASEAIEVYKMMEECKEII------------PNQGTWVSILPAYAHVGALQQGMRIHGR 545
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K D +A LI Y +CG + + +F ++ V+WN+I+ + +HG A++
Sbjct: 546 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKT 605
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+LF M V+PD TFVSLLSACSH+G V+EG F M E +G+ P L HY CMVD
Sbjct: 606 LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVD 664
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G + A I++MP++PD+ IW LLG+CR HG L + A+ +L +++ +
Sbjct: 665 LLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGY 724
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SNIY G + +R + ++K PG S IE+ +V F +G + HP+ + I
Sbjct: 725 YVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEI 784
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+++L L ++K +GY+P+ S L D+EE+ KE L HSE+LA+ F I++ +S
Sbjct: 785 YEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIST----PPKS 840
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+C DCHN K S + +EIVVRDSNRFHHFKD ICSC DYW
Sbjct: 841 PIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 192/380 (50%), Gaps = 24/380 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q +F++ L+N+YA G + +R FD++P+++V +W ++IS Y +G+ E F L
Sbjct: 149 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQL 208
Query: 100 L--QYFFPNEFSLASVLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
L P+ ++ VL +C L G+ +H A K +V+VA +LI+MYS+
Sbjct: 209 LLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A +F++M FR++ SWN+MI+ AQA+++ +M+ EG+ +
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR-------------LEGIKMN 315
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+ T +L C L A +H + K+G E D ++NALI+ YA+ G++ +++ F
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQE 332
+M D+VSWNSI+ AY + A F M + QPD T VSL S + + +
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
V ++ ++ + +VD+ ++G + A K+ E+ + D + W+ L+
Sbjct: 436 SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF-EIILVKDVISWNTLITGY 494
Query: 393 RKHGETRLAELAATKLKQLE 412
++G LA A K +E
Sbjct: 495 AQNG---LASEAIEVYKMME 511
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 156/323 (48%), Gaps = 26/323 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAFRA 180
K +HAL + ++++ L+N+Y+ + D + F+ + ++V +WNSMI+A+
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYA-NLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+AI F + L L +++ PD+ TF VLKAC LV R +H
Sbjct: 195 NGHFHEAIGCFYQ-------LLLVSEIR-----PDFYTFPPVLKACGTLVDGRR---IHC 239
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K GF+ + +A +LIH Y+R G +++ +FD M + D+ SWN+++ +G A +
Sbjct: 240 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 299
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL + M ++ + T VS+L C G + + H + HG+ L ++
Sbjct: 300 ALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTA-MLIHLYVIKHGLEFDLFVSNALI 358
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE--LAATKLKQLEPGD 415
++ + G + +A K ++M + D V W+ ++ + ++ + A +L +P D
Sbjct: 359 NMYAKFGNLEDARKAFQQMFIT-DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP-D 416
Query: 416 SLGFVQMSNIYCLSGSFNKARLI 438
L V +++I S +R +
Sbjct: 417 LLTLVSLASIVAQSRDCKNSRSV 439
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
A +H+L+ G I+ L++ YA G +SLS+ FD++ D+ +WNS++ AY
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 295 HGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G EA+ F + ++PD TF +L AC G + +G ++ H G +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRI-HCWAFKLGFQWNV 250
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
A ++ + R G A L +MP D W+ ++ ++G A L +
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQA-LDVLDEMR 308
Query: 411 LEPGDSLGFVQMSNI 425
LE G + FV + +I
Sbjct: 309 LE-GIKMNFVTVVSI 322
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 332/572 (58%), Gaps = 31/572 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D N L++ Y ++G + +AR LFD MP R+VVSW ++SGYA+ G+ E RLF +
Sbjct: 192 DAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMY-SKSCADEAWK 158
+ F+ +V +S +G L A + ++ V+ NA++ Y + DEA +
Sbjct: 252 ---VRDVFTWTAV-VSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKE 307
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEA 200
+F M RNV SWN+M+ + + +A +F M + EE
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LF ++ R G + F+ VL CA + +H + + G+ + NAL+
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
Y +CG++ ++ F++M D+VSWN+++ YA HG KEAL++F M + +PD T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
V +L+ACSH+GLV++G F+SM + GV + +HY CM+DLLGR GR+ EA L+++MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
EPDS +W LLG+ R H L AA K+ +LEP ++ +V +SNIY SG + AR
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607
Query: 438 IRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPE 497
+R M+ V+K PG SWIE++N+VH F++G HP++E I+ LE+L ++K GYV
Sbjct: 608 MRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSA 667
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T + LHD+EEE KE L +HSEKLA+ + I+N IR++KN+R+C DCHN K
Sbjct: 668 TDMVLHDVEEEEKEHMLKYHSEKLAVAYGILN----IPPGRPIRVIKNLRVCGDCHNAFK 723
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + G+ I++RDSNRFHHF+ CSC DYW
Sbjct: 724 YISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 65/393 (16%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
EP+ + +N I + + G + DA LF MP+R+ ++ A+++GY+ +G LF
Sbjct: 35 EPE-VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 98 SLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAW 157
++ + P+ +S + L+HALA+ S S AD A
Sbjct: 94 AIPR---PDNYS-----------YNTLLHALAV------------------SSSLAD-AR 120
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F+ M R+ +++N MI++ L + A F + E++A + GM +
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF-DLAPEKDA------VSWNGMLAAYV 173
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
V +A GL R E D + NAL+ Y + G +S ++++FD+M
Sbjct: 174 RNGRVEEA-RGLFNSRT-------------EWDAISWNALMSGYVQWGKMSEARELFDRM 219
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+VSWN ++ YA G EA +LF V+ D T+ +++S + G+++E +VF
Sbjct: 220 PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR-DVFTWTAVVSGYAQNGMLEEARRVF 278
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+M E + V + MV + + EA++L MP + W+ +L + G
Sbjct: 279 DAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTGYAQAG- 331
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+ E A + D++ + M Y G
Sbjct: 332 --MLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/592 (36%), Positives = 343/592 (57%), Gaps = 18/592 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC+ ++ +LH + + N + ++ FV + L++MY + +FD M
Sbjct: 302 SSVLPACSHLEMLRTGKELHAYALKNGSLD-ENSFVGSALVDMYCNCKQVLSGCRVFDGM 360
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHG 122
R + W A+I+GYAQ+ EE LF + + N ++A V+ +C +
Sbjct: 361 FDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKK 420
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K LD +V NAL++MYS+ D A ++F ME R++++WN++I +
Sbjct: 421 EAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFS 480
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ A+ + KM+ E + R + P+ T +L +CA L +H+
Sbjct: 481 ERHEDALLMLHKMQILERKAS--ERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 538
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K D + +AL+ YA+CG + +S++VFD++ ++++WN I+ AY +HG +++A
Sbjct: 539 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDA 598
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ + M VQ P+ TF+S+ +ACSH+G+V EG K+F++M +++GV P DHYAC+VD
Sbjct: 599 IDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVD 658
Query: 359 LLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
LLGR GR+ EA +LI +P D WS LLG+CR H + E+AA L QLEP +
Sbjct: 659 LLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVAS 718
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V ++NIY +G + KA +R+ MK VRK PG SWIE + VH+F +G HPQ E
Sbjct: 719 HYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 778
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ LE L +++ GY+P+TS LH++EE+ KE L HSEKLA+ F I+N
Sbjct: 779 LRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP----G 834
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++IR+ KN+R+C DCH K S ++ +EI++RD RFHHFK+ CSC DYW
Sbjct: 835 TIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 190/400 (47%), Gaps = 39/400 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A A ++ Q+H H + F + V N L+N+Y K G +FD
Sbjct: 96 FPALLKAVADLQDMDLGKQIHAH-VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 154
Query: 68 MPKRNVVSWTALIS---GYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCD------ 118
+ +RN VSW +LIS + + A E FR C L + P+ F+L SV ++C
Sbjct: 155 ISERNQVSWNSLISSLCSFEKWEMALEAFR--CMLDEDVEPSSFTLVSVALACSNFPMPE 212
Query: 119 -YLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFRNVISWNSMIA 176
L GK VHA L+ + + ++ N L+ MY K + KV + E R++++WN++++
Sbjct: 213 GLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLS 271
Query: 177 AFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ +NE+ EAL R++ EG+ PD T S VL AC+ L R
Sbjct: 272 SL---------------CQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRT 316
Query: 235 ASAVHSLIAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H+ K G ++++ + +AL+ Y C + +VFD M + WN+++ YA
Sbjct: 317 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYA 376
Query: 294 LHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ +EAL LF M + +S T ++ AC +G + + H + G+
Sbjct: 377 QNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK-KEAIHGFVVKRGLDRD 435
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ R+G+I A+++ +M + D V W+ ++
Sbjct: 436 RFVQNALMDMYSRLGKIDIAKRIFGKME-DRDLVTWNTII 474
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 34/255 (13%)
Query: 105 PNEFSLASVLISCDYLH----GKLVHALALKFSLDAH-VYVANALINMYSKSCAD--EAW 157
P+ F+ ++L + L GK +HA KF V VAN L+N+Y K C D +
Sbjct: 91 PDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRK-CGDFGAVY 149
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
KVF+ + RN +SWNS+I++ C E E AL FR + E + P
Sbjct: 150 KVFDRISERNQVSWNSLISSL--CSFEKW-----------EMALEAFRCMLDEDVEPSSF 196
Query: 218 TFSIVLKACA------GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
T V AC+ GL+ + VH+ + G E ++ I N L+ Y + G ++ SK
Sbjct: 197 TLVSVALACSNFPMPEGLLMGKQ---VHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSK 252
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+ DLV+WN++L + + Q EAL+ M V+PD T S+L ACSH
Sbjct: 253 VLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLE 312
Query: 329 LVQEGNKVFHSMLEN 343
+++ G ++ L+N
Sbjct: 313 MLRTGKELHAYALKN 327
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANAL 257
EA+ + + G+ PD F +LKA A L +H+ + K+G+ D+V +AN L
Sbjct: 76 EAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTL 135
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
++ Y +CG +VFD+++ + VSWNS++ + + + AL+ F M +V+P S
Sbjct: 136 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSS 195
Query: 315 ATFVSLLSACSHAGLVQEG---NKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEA 369
T VS+ ACS+ + EG K H+ G +L+ + +V + G++G++ +
Sbjct: 196 FTLVSVALACSNFPM-PEGLLMGKQVHAYGLRKG---ELNSFIINTLVAMYGKMGKLASS 251
Query: 370 EKLIREMPMEPDSVIWSVLLGS 391
+ L+ D V W+ +L S
Sbjct: 252 KVLLGSFEGR-DLVTWNTVLSS 272
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 333/572 (58%), Gaps = 31/572 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ N L++ Y ++G + +AR LFD MP R+VVSW ++SGYA+ G+ E RLF +
Sbjct: 67 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 126
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMY-SKSCADEAWK 158
+ F+ +V +S +G L A + ++ V+ NA++ Y + DEA +
Sbjct: 127 ---VRDVFTWTAV-VSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKE 182
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEA 200
+F M RNV SWN+M+ + + +A +F M + EE
Sbjct: 183 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 242
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LF ++ R G + F+ VL CA + +H + + G+ + NAL+
Sbjct: 243 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 302
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
Y +CG++ ++ F++M D+VSWN+++ YA HG KEAL++F M + +PD T
Sbjct: 303 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 362
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
V +L+ACSH+GLV++G F+SM + GV + +HY CM+DLLGR GR+ EA L+++MP
Sbjct: 363 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 422
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
EPDS +W LLG+ R H L AA K+ +LEP ++ +V +SNIY SG + AR
Sbjct: 423 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 482
Query: 438 IRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPE 497
+R M+ V+K PG SWIE++N+VH F++G HP++E I+ LE+L ++K GYV
Sbjct: 483 MRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSA 542
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T + LHD+EEE KE L +HSEKLA+ + I+N IR++KN+R+C DCHN K
Sbjct: 543 TDMVLHDVEEEEKEHMLKYHSEKLAVAYGILN----IPPGRPIRVIKNLRVCGDCHNAFK 598
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + G+ I++RDSNRFHHF+ CSC DYW
Sbjct: 599 YISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E D + NAL+ Y + G +S ++++FD+M D+VSWN ++ YA G EA +LF
Sbjct: 65 EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA 124
Query: 308 MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
V+ D T+ +++S + G+++E +VF +M E + V + MV + +
Sbjct: 125 APVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMD 178
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 427
EA++L MP + W+ +L + G + E A + D++ + M Y
Sbjct: 179 EAKELFNMMPCR-NVASWNTMLTGYAQAG---MLEEAKAVFDTMPQKDAVSWAAMLAAYS 234
Query: 428 LSG 430
G
Sbjct: 235 QGG 237
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN 309
D+V N +I ++A G +SL++ FD D VSWN +L AY +G+ +EA LF N
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-NSR 63
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD--HYACMVDLLGRVGRIL 367
+ D ++ +L+S G + E ++F M P D + MV R G ++
Sbjct: 64 TEWDVISWNALMSGYVQWGKMSEARELFDRM-------PGRDVVSWNIMVSGYARRGDMV 116
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
EA +L P+ D W+ ++ ++G
Sbjct: 117 EARRLFDAAPVR-DVFTWTAVVSGYAQNG 144
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E D V N ++ AY R G + ++ +F+ T D++SWN+++ Y G+ EA +LF
Sbjct: 34 EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR 93
Query: 308 MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
M + D ++ ++S + G + E ++F + V + + +V + G +
Sbjct: 94 MPGR-DVVSWNIMVSGYARRGDMVEARRLFDA-----APVRDVFTWTAVVSGYAQNGMLE 147
Query: 368 EAEKLIREMPMEPDSVIWSVLLGS 391
EA ++ MP E ++V W+ ++ +
Sbjct: 148 EARRVFDAMP-ERNAVSWNAMVAA 170
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 340/589 (57%), Gaps = 29/589 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G++ +H + + N L++MYAK G LD A +FD M
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTF--CNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKL 124
R VV+WT+LI+ YA+ G ++E RLF + + P+ F++ +VL +C +GK
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKL 183
VH + + ++++V NAL++MY+K + ++A VF M +++ISWN+MI + L
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+A+ LF M E M PD T + +L ACA L + VH I
Sbjct: 181 PNEALSLFGDMVLE--------------MKPDGTTLACILPACASLASLDRGKEVHGHIL 226
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ GF D +ANAL+ Y +CG L++ +FD + DL++W ++ Y +HG A+
Sbjct: 227 RNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAIT 286
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M ++PD +F+S+L ACSH+GL+ EG + F+ M + V P+L+HYAC+VDLL
Sbjct: 287 TFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLL 346
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R G++ A K I+ MP+EPD+ IW LL CR H + +LAE A + +LEP ++ +V
Sbjct: 347 ARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYV 406
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
++N Y + + + + +R+++ ++K PG SWIE++++VH F +G HPQ + I
Sbjct: 407 LLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEV 466
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
L+ L ++K GY P+T AL + + KE L HSEKLA+ F I+N L R+ I
Sbjct: 467 LLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILN---LPPART-I 522
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ KN+R+C DCH K S LG+EIV+RDSNRFHHFKD +C C +W
Sbjct: 523 RVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A + ACA ++ + ++H H++ N F ++ Q V N L++MY K G AR LFD
Sbjct: 203 ACILPACASLASLDRGKEVHGHILRNGFFSDQQ---VANALVDMYVKCGVPVLARLLFDM 259
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
+P +++++WT +I+GY HG F + Q P+E S S+L +C +
Sbjct: 260 IPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSH 312
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 327/558 (58%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV N L++ Y+K LDD R LFDEMP+R+ VS+ +I+ YA + A RLF +
Sbjct: 270 NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ 329
Query: 101 QYFFPNEF----SLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ F + ++ SV S +H GK +HA + L + + NALI+MYSK D
Sbjct: 330 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 389
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A F N ++ ISW ++I + + EEAL LF ++R G+ P
Sbjct: 390 AAKSNFSNRSEKSAISWTALITGY-------------VQNGQHEEALQLFSDMRRAGLRP 436
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D TFS ++KA + L +HS + + G++ + L+ YA+CG + + + F
Sbjct: 437 DRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF 496
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D+M + +SWN+++ AYA +G+AK A+++F M PDS TF+S+L+ACSH GL
Sbjct: 497 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 556
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
E K FH M + + P +HYAC++D LGRVG + +K++ EMP + D +IW+ +L S
Sbjct: 557 ECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR HG LA +AA KL +EP D+ +V +SNIY +G + A ++K M+ VRK
Sbjct: 617 CRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKES 676
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+EI+ +++ FAS P + I +L+ L ++ GY P+ + ALH ++ E K
Sbjct: 677 GYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKL 736
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E L +HSE+LA+ FA+MN + + IRIMKN+ C+DCH +K+ S ++ ++I+VRD
Sbjct: 737 ESLKYHSERLAIAFALMNTPA----GTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRD 792
Query: 572 SNRFHHFKDRICSCNDYW 589
S RFHHFKD +CSC DYW
Sbjct: 793 SRRFHHFKDGVCSCGDYW 810
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 29/375 (7%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
M + P+ +++F N +++ Y+ G L A+HLF P RN +WT ++ +A G
Sbjct: 65 MFDQMPH--KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTS 122
Query: 91 ECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV---HALALKFSLDAHVYVANALIN 146
+ LF ++L + P+ ++ +VL L G V H A+KF LD HV+V N L++
Sbjct: 123 DALSLFRAMLGEGVIPDRVTVTTVL----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLD 178
Query: 147 MYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
Y K A +VF M ++ +++N+M+ L QA++LFA M+
Sbjct: 179 AYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR---------- 228
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
R G+ TFS +L AG+ VH+L+ + + + N+L+ Y++C
Sbjct: 229 ---RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCD 285
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+ +++FD+M D VS+N I+ AYA + A L+LF M + ++LS
Sbjct: 286 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 345
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
V G ++ H+ L G+ + ++D+ + G +L+A K E +
Sbjct: 346 VAGSLPDVHIGKQI-HAQLVLLGLASEDLLGNALIDMYSKCG-MLDAAKSNFSNRSEKSA 403
Query: 383 VIWSVLLGSCRKHGE 397
+ W+ L+ ++G+
Sbjct: 404 ISWTALITGYVQNGQ 418
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GF+ T N + + G + ++ +FD+M + ++ S N IL AY+ G A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
LF + + ++ T+ ++ A + AG + +F +ML GV+P +++L G
Sbjct: 94 QHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAML-GEGVIPDRVTVTTVLNLPG 151
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/582 (38%), Positives = 338/582 (58%), Gaps = 32/582 (5%)
Query: 16 ALHGNIKQAMQLHE--HMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
AL Q Q+ E M N P +D+ N +++ YA+ G + +AR LFD P R+V
Sbjct: 267 ALMAGYVQRSQIEEAQKMFNKMPQ--RDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDV 324
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFS 133
+WTA++SGYAQ+G EE R+F ++ P++ +++ + Y+ +++ F
Sbjct: 325 FTWTAIVSGYAQNGMLEEAKRVFDAM-----PDKNAVSWNAMMAAYVQRRMMEEAKELFD 379
Query: 134 LDAHVYVA--NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
VA N ++ Y+++ DEA +F M ++ +SW +M+AA+
Sbjct: 380 AMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAY------------ 427
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
+++ EE L LF+++ R G + F+ VL CA + +HS + K G+
Sbjct: 428 -SQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVG 486
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
+ NAL+ Y +CGS+ + F++M D+VSWN+++ YA HG KEAL++F M
Sbjct: 487 CFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRK 546
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
+ +PD T V +L+ACSH+GLV++G F+SM + GV + +HY CM+DLLGR GR+
Sbjct: 547 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLD 606
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 427
EA L+++MP EPDS +W LLG+ R H + L AA K+ +LEP ++ +V +SNIY
Sbjct: 607 EAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYA 666
Query: 428 LSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIG 487
SG + +R M V+K PG SWIE++N+VH F+ G HP+RE I+ LE+L
Sbjct: 667 SSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDI 726
Query: 488 QLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
++K GYV T + LHD+EEE KE L +HSEKLA+ + I+ IR++KN+R
Sbjct: 727 RMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILK----IPPGRPIRVIKNLR 782
Query: 548 ICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+C DCH K S + G+ I++RDSNRFHHF+D CSC DYW
Sbjct: 783 VCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 170/351 (48%), Gaps = 56/351 (15%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQ-DLFVTNHLINMYAKFGYLDDA 61
ST Y T+ A +G + QA+ F + P+ D F N L++ L D
Sbjct: 136 RSTSTYNTMLAGYAANGRLPQALSF-------FRSIPRPDSFSYNTLLHALGVSSSLADV 188
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF---PNEFSLA-SVLISC 117
R LFDEMP ++ VS+ +IS +A HG SL +++F P + +++ + +++
Sbjct: 189 RALFDEMPVKDSVSYNVMISSHANHG--------LVSLARHYFDLAPEKDAVSWNGMLAA 240
Query: 118 DYLHGKLVHALAL---KFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNS 173
+G++ A L + DA + NAL+ Y +S +EA K+F M R+V+SWN+
Sbjct: 241 YVRNGRIQEARELFDSRTEWDAISW--NALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNT 298
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP--DWCTFSIVLKACA--GL 229
M++ +A+ + EA LF +AP D T++ ++ A G+
Sbjct: 299 MVSG-------------YARRGDMAEARRLF------DVAPIRDVFTWTAIVSGYAQNGM 339
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+ E A V + + + V NA++ AY + + +K++FD M ++ SWN++L
Sbjct: 340 LEE--AKRVFDAMP----DKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTML 393
Query: 290 KAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
YA G EA +F M Q D+ ++ ++L+A S G +E ++F M
Sbjct: 394 TGYAQAGMLDEARAIF-GMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEM 443
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 161/385 (41%), Gaps = 76/385 (19%)
Query: 36 PNEPQDLFVT----------NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
P P D +T N I + + G + DA LF MP+R+ ++ +++GYA
Sbjct: 91 PPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAA 150
Query: 86 HGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSL----------- 134
+G + F S+ + P+ FS + L+HAL + SL
Sbjct: 151 NGRLPQALSFFRSIPR---PDSFS-----------YNTLLHALGVSSSLADVRALFDEMP 196
Query: 135 --DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
D+ Y N +I+ ++ A F+ ++ +SWN M+AA+ +A ELF
Sbjct: 197 VKDSVSY--NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF 254
Query: 192 ------------------AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+ EEA +F ++ + + W T + R
Sbjct: 255 DSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVV-SWNTMVSGYARRGDMAEAR 313
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
V + D A++ YA+ G + +K+VFD M + VSWN+++ AY
Sbjct: 314 RLFDVAPI-------RDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYV 366
Query: 294 LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD-- 351
+EA +LF M + + A++ ++L+ + AG++ E +F G++PQ D
Sbjct: 367 QRRMMEEAKELFDAMPCR-NVASWNTMLTGYAQAGMLDEARAIF-------GMMPQKDAV 418
Query: 352 HYACMVDLLGRVGRILEAEKLIREM 376
+A M+ ++G E +L +EM
Sbjct: 419 SWAAMLAAYSQIGFSEETLQLFKEM 443
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 140/306 (45%), Gaps = 44/306 (14%)
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE--------------A 200
+A ++F M R+ ++N+M+A + A QA+ F + + +
Sbjct: 125 DAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSS 184
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGF----EDDTVIA 254
L R L E D ++++++ + A GLV+ +A++ F E D V
Sbjct: 185 LADVRALFDEMPVKDSVSYNVMISSHANHGLVS----------LARHYFDLAPEKDAVSW 234
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDS 314
N ++ AY R G I ++++FD T D +SWN+++ Y Q +EA ++F+ M Q D
Sbjct: 235 NGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMP-QRDV 293
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD--HYACMVDLLGRVGRILEAEKL 372
++ +++S + G + E ++F V P D + +V + G + EA+++
Sbjct: 294 VSWNTMVSGYARRGDMAEARRLFD-------VAPIRDVFTWTAIVSGYAQNGMLEEAKRV 346
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
MP + ++V W+ ++ + + + R+ E A + + + M Y +G
Sbjct: 347 FDAMP-DKNAVSWNAMMAA---YVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGML 402
Query: 433 NKARLI 438
++AR I
Sbjct: 403 DEARAI 408
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L+A A + R A + + + N I A+ R G + ++++F M
Sbjct: 79 LRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRST 138
Query: 283 VSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSML- 341
++N++L YA +G+ +AL F ++ +PDS ++ +LL A + + + +F M
Sbjct: 139 STYNTMLAGYAANGRLPQALSFFRSIP-RPDSFSYNTLLHALGVSSSLADVRALFDEMPV 197
Query: 342 -------------ENHGVVPQLDHY------------ACMVDLLGRVGRILEAEKLIREM 376
NHG+V HY M+ R GRI EA +L +
Sbjct: 198 KDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF-DS 256
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
E D++ W+ L+ + + A+ K+ Q D + + M + Y G +AR
Sbjct: 257 RTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQR---DVVSWNTMVSGYARRGDMAEAR 313
Query: 437 LI 438
+
Sbjct: 314 RL 315
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 328/559 (58%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV N L++ Y+K LDD R LFDEMP+R+ VS+ +I+ YA + A RLF +
Sbjct: 270 NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ 329
Query: 101 QYFFPNEF----SLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ F + ++ SV S +H GK +HA + L + + NALI+MYSK C
Sbjct: 330 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSK-CGML 388
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D A F N ++ ISW ++I + + EEAL LF ++R G+
Sbjct: 389 DAAKSNFSNRSEKSAISWTALITGY-------------VQNGQHEEALQLFSDMRRAGLR 435
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD TFS ++KA + L +HS + + G++ + L+ YA+CG + + +
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD+M + +SWN+++ AYA +G+AK A+++F M PDS TF+S+L+ACSH GL
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 555
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
E K FH M + + P +HYAC++D LGRVG + +K++ EMP + D +IW+ +L
Sbjct: 556 DECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILH 615
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
SCR HG LA +AA KL +EP D+ +V +SNIY +G + A ++K M+ VRK
Sbjct: 616 SCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKE 675
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G SW+EI+ +++ FAS P + I +L+ L ++ GY P+ + ALH ++ E K
Sbjct: 676 SGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELK 735
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E L +HSE+LA+ FA+MN + + IRIMKN+ C+DCH +K+ S ++ ++I+VR
Sbjct: 736 LESLKYHSERLAIAFALMNTPA----GTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVR 791
Query: 571 DSNRFHHFKDRICSCNDYW 589
DS RFHHFKD +CSC DYW
Sbjct: 792 DSRRFHHFKDGVCSCGDYW 810
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 29/375 (7%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
M + P+ +++F N +++ Y+ G L A+HLF P RN +WT ++ +A G
Sbjct: 65 MFDQMPH--KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTS 122
Query: 91 ECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV---HALALKFSLDAHVYVANALIN 146
+ LF ++L + P+ ++ +VL L G V H A+KF LD HV+V N L++
Sbjct: 123 DALSLFRAMLGEGVIPDRVTVTTVL----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLD 178
Query: 147 MYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
Y K A +VF M ++ +++N+M+ L QA++LFA M+
Sbjct: 179 AYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR---------- 228
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
R G+ TFS +L AG+ VH+L+ + + + N+L+ Y++C
Sbjct: 229 ---RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCD 285
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+ +++FD+M D VS+N I+ AYA + A L+LF M + ++LS
Sbjct: 286 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 345
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
V G ++ H+ L G+ + ++D+ + G +L+A K E +
Sbjct: 346 VAGSLPDVHIGKQI-HAQLVLLGLASEDLLGNALIDMYSKCG-MLDAAKSNFSNRSEKSA 403
Query: 383 VIWSVLLGSCRKHGE 397
+ W+ L+ ++G+
Sbjct: 404 ISWTALITGYVQNGQ 418
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GF+ T N + + G + ++ +FD+M + ++ S N IL AY+ G A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
LF + + ++ T+ ++ A + AG + +F +ML GV+P +++L G
Sbjct: 94 QHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAML-GEGVIPDRVTVTTVLNLPG 151
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 334/561 (59%), Gaps = 28/561 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ LI YA GY++ A+ +FDE+P ++VVSW A+ISGYA GN +E LF +
Sbjct: 167 RDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEM 226
Query: 100 LQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-A 153
++ P+E ++ +V+ +C G+ VH+ L +++ + NALI++YSK
Sbjct: 227 MKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEV 286
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ A +F+ + ++VISWN+MI + L +EAL LF+++ R G
Sbjct: 287 ETACGLFQGLSNKDVISWNTMIGGYTHLNLY-------------KEALLLFQEMLRSGEN 333
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLSK 271
P+ T +L ACA L +H I K G + + + +LI YA+CG I +
Sbjct: 334 PNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAH 393
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
QVF+ M + L + N+++ +A+HG+A A +FS M ++PD TFV LLSACSH+G
Sbjct: 394 QVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSG 453
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
++ G ++F SM +N+ + P+L+HY CM+DLLG +G EAE++I M MEPD VIW L
Sbjct: 454 MLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSL 513
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +C+ HG L E A KL ++EP + +V +SNIY +G +N+ IR + ++
Sbjct: 514 LKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMK 573
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS L ++EEE
Sbjct: 574 KVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEE 633
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K+ L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S + +EI+
Sbjct: 634 FKQGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLISKIYKREII 689
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
RD RFHHF+D +CSCNDYW
Sbjct: 690 ARDRTRFHHFRDGVCSCNDYW 710
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 192/419 (45%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F+ + + N++ W + G+A + +L+ C + PN ++ +
Sbjct: 50 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFL 109
Query: 114 LISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC L G+ +H LK + +YV +LI+MY K+ +A KVF+ R+V
Sbjct: 110 LKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDV 169
Query: 169 ISWNSMIAAF--RACKLEAQA----------------IELFAKMKNEEEALFLFRQLQRE 210
+S+ ++I + R AQ I +A N +EAL LF+++ +
Sbjct: 170 VSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKT 229
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ ACA + + VHS I +G + I NALI Y++CG + +
Sbjct: 230 NVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETA 289
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F ++ D++SWN+++ Y KEAL LF M P+ T +S+L AC+
Sbjct: 290 CGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQL 349
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ GV ++D+ + G I A ++ M S
Sbjct: 350 GAIDFG-RWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACN 408
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+++ G HG A +++++ +EP D + FV + + SG + R I + M
Sbjct: 409 AMIFGFAM-HGRANAAFDIFSRMRKNGIEP-DDITFVGLLSACSHSGMLDLGRRIFRSM 465
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 112 SVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE----AWKVFENMEFR 166
S+L +C L +++HA +K L Y + L+ S + A VFE ++
Sbjct: 7 SLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEP 66
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
N++ WN+M FR L + + A+ L+ + G+ P+ TF +LK+C
Sbjct: 67 NLLIWNTM---FRGHALSSDPVS----------AIKLYVCMISLGLLPNSYTFPFLLKSC 113
Query: 227 AGLVTERHASAVHSLIAKYGFE-------------------------------DDTVIAN 255
A L + +H + K G+E D V
Sbjct: 114 AKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYT 173
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI YA G I ++++FD++ D+VSWN+I+ YA G KEAL LF M NV+P
Sbjct: 174 ALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKP 233
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D +T V+++SAC+ +G +Q G +V HS +++HG+ L ++DL + G + A L
Sbjct: 234 DESTMVTVVSACAQSGSIQLGRQV-HSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGL 292
Query: 373 IREMPMEPDSVIWSVLLGS 391
+ + D + W+ ++G
Sbjct: 293 FQGLS-NKDVISWNTMIGG 310
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G I +H ++ + LI+MYAK G ++ A +F+ M
Sbjct: 341 SILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMH 400
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
R + + A+I G+A HG A F +F + + P++ + +L +C +
Sbjct: 401 HRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSH 451
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/601 (37%), Positives = 343/601 (57%), Gaps = 37/601 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ I+ L A G++ A ++ + M N +DL N ++N YA+ G L++
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN------RDLCSWNVMVNGYAEVGLLEE 169
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF---FPNEFSLA-----S 112
AR LFDEM +++ SWTA+++GY + EE L+ SL+Q PN F+++ +
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY-SLMQRVPNSRPNIFTVSIAVAAA 228
Query: 113 VLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
+ C GK +H ++ LD+ + ++L++MY K C DEA +F+ + ++V+SW
Sbjct: 229 AAVKC-IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSW 287
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
SMI + + K E LF +L P+ TF+ VL ACA L T
Sbjct: 288 TSMI-------------DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
E VH + + GF+ + +++L+ Y +CG+I +K V D DLVSW S++
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 292 YALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
A +GQ EAL+ F +PD TFV++LSAC+HAGLV++G + F+S+ E H +
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
DHY C+VDLL R GR + + +I EMPM+P +W+ +LG C +G LAE AA +L
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
++EP + + +V M+NIY +G + + +RK M+ V K PG SW EI+ + H F +
Sbjct: 515 FKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAA 574
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HP I + L EL ++K GYVP TSL LHD+E+E KEE L +HSEKLA+ FAI+
Sbjct: 575 DTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAIL 634
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ E + I++ KN+R CVDCH +K S++ ++I VRDS RFH F++ CSC DY
Sbjct: 635 ST----EEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDY 690
Query: 589 W 589
W
Sbjct: 691 W 691
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 53/331 (16%)
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLE--AQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
K F + +F N + + R C+ +AI++ K EA+ QL P
Sbjct: 29 KRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAV----QLLGRAKKPP 84
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T+ +++ C+ VH I GF VI N L+ YA+CGS+ +++VFD
Sbjct: 85 ASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFD 144
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNK 335
+M DL SWN ++ YA G +EA +LF M + DS ++ ++++ +E
Sbjct: 145 EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM-TEKDSYSWTAMVTGYVKKDQPEEA-L 202
Query: 336 VFHSMLE--------------------------------NHGVVPQLDH----YACMVDL 359
V +S+++ H V LD ++ ++D+
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
G+ G I EA + ++ +E D V W+ ++ K R ++L +G
Sbjct: 263 YGKCGCIDEARNIFDKI-VEKDVVSWTSMIDRYFKSSRWREGFSLFSEL--------VGS 313
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+ N Y +G N + E G +V Y
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGY 344
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/625 (36%), Positives = 354/625 (56%), Gaps = 67/625 (10%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFGYL---- 58
++ ++ +CAL ++ LH ++I +F DL+ N L+NMY+K +L
Sbjct: 107 NVFPSVLKSCALLMDLNLGESLHGYIIRVGLDF-----DLYTGNALMNMYSKLRFLEESG 161
Query: 59 ----------------------------DDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
D R +F+ MP++++VSW +I+G A++G E
Sbjct: 162 RQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE 221
Query: 91 ECFRLFCSLLQYFF-PNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANALI 145
E R+ + P+ F+L+SVL + D GK +H +++ LDA +YVA++LI
Sbjct: 222 ETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLI 281
Query: 146 NMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
+MY+K ++ +VF + R+ ISWNS+IA C LF +E L F
Sbjct: 282 DMYAKCTRVADSCRVFTLLTERDGISWNSIIAG---CVQNG----LF------DEGLRFF 328
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
RQ+ + P +FS ++ ACA L T +H I + GF+++ IA++L+ YA+C
Sbjct: 329 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 388
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSAC 324
G+I +KQ+FD+M D+VSW +++ ALHGQA +A++LF M + A +L+AC
Sbjct: 389 GNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKA----VLTAC 444
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH GLV E K F+SM + G+ P ++HYA + DLLGR GR+ EA I M + P I
Sbjct: 445 SHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSI 504
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W+ LL +CR H +AE A ++ +++P ++ ++ ++NIY + + +A R M+
Sbjct: 505 WATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRR 564
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
+RK P SWIE++N+V+ F +G + HP E I + +E L+ ++ GYVP+TS HD
Sbjct: 565 IGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHD 624
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
+EEE K+ + HSE+LA+VF I+N + IR+ KN+R+C DCH K S ++G
Sbjct: 625 VEEEQKKYLVCSHSERLAIVFGIINTPA----GMTIRVTKNLRVCTDCHTATKFISKIVG 680
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EIVVRD++RFHHFK+ CSC DYW
Sbjct: 681 REIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 59/416 (14%)
Query: 23 QAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISG 82
QA QLH ++ + L + L+++Y+ L D+ LF+ + ++W ++I
Sbjct: 24 QAQQLHAQVLKF---QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRC 80
Query: 83 YAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAH 137
Y HG + F +L +P+ SVL SC L G+ +H ++ LD
Sbjct: 81 YTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD 140
Query: 138 VYVANALINMYSK---------------------------------SCADEAWKVFENME 164
+Y NAL+NMYSK D K+FE M
Sbjct: 141 LYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMP 200
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
++++SWN++IA A+ EE L + R++ + PD T S VL
Sbjct: 201 EKDLVSWNTIIAG-------------NARNGLYEETLRMIREMGGANLKPDSFTLSSVLP 247
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
A V +H + G + D +A++LI YA+C ++ S +VF +T D +S
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
WNSI+ +G E L+ F M ++P S +F S++ AC+H + G K H +
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG-KQLHGYI 366
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+G + + +VD+ + G I A+++ M + D V W+ ++ C HG+
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALHGQ 421
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/596 (36%), Positives = 346/596 (58%), Gaps = 28/596 (4%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
H ++++ AC+ +++ Q+H ++ + + FV N LI MYA G + AR
Sbjct: 119 HDKFTFSSVLKACSRMKALREGEQVHALILKS--GFKSNEFVENTLIQMYANCGQIGVAR 176
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH 121
H+FD MP+R++V+W +++SGY ++G +E +LF +L+ ++ ++ SVL++C L
Sbjct: 177 HVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLA 236
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
G+L+ + L + + +LI+MY+K D A K+F+ M+ R+V++W++MI+
Sbjct: 237 NLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMIS 296
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ A+ +EAL LF ++Q+ + P+ T VL +CA L
Sbjct: 297 GY-------------AQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGK 343
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH I K + + LI YA+CG I S +VF +M++ ++ +W ++++ A +G
Sbjct: 344 WVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNG 403
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+ K AL+ FS+M +V+P+ TF+ +LSACSHA LV +G +F+SM + + P+++HY
Sbjct: 404 EGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHY 463
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
CMVD+LGR G + EA + I MP P++V+W LL SCR H +AE + + +LEP
Sbjct: 464 GCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEP 523
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
S ++ +SN Y L G A +R +K ++K PG S IE++ VHEF S H
Sbjct: 524 AHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHK 583
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ I L++++ Q+K +GYVP T A + EEE KE + HHSEKLA+ + ++
Sbjct: 584 HSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSP- 642
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ IRI KN+R+C DCHN K S + + I+VRD NRFHHFKD +CSCNDYW
Sbjct: 643 ---RTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 18/239 (7%)
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D A +F +++ ++N MI A ++ + AL LF+++ + +
Sbjct: 72 DYALSIFNHIDKPESSAYNVMIRGL-------------AFKRSPDNALLLFKKMHEKSVQ 118
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D TFS VLKAC+ + R VH+LI K GF+ + + N LI YA CG I +++ V
Sbjct: 119 HDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHV 178
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLV 330
FD M +V+WNS+L Y +G E ++LF + ++ D T +S+L AC +
Sbjct: 179 FDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANL 238
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ G ++ + + G+ ++D+ + G++ A KL EM + D V WS ++
Sbjct: 239 EIG-ELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMI 295
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 335/556 (60%), Gaps = 24/556 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
+++V + L++MYAK G L +A+++ + M +VVSW +L+ G+ +HG EE RLF ++
Sbjct: 299 NVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH 358
Query: 100 LQYFFPNEFSLASVLISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEA 156
+ ++++ SVL C ++ K VH L +K + + V+NAL++MY+K+ D A
Sbjct: 359 GRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+ VFE M ++VISW S++ + A+ + EE+L +F ++ G+ PD
Sbjct: 419 YTVFEKMLEKDVISWTSLVTGY-------------AQNNSHEESLKIFCDMRVTGVNPDQ 465
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
+ +L ACA L VH K G + N+L+ YA+CG + + +F
Sbjct: 466 FIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVS 525
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M D+++W +I+ YA +G+ + +L+ + M +PD TF+ LL ACSHAGLV EG
Sbjct: 526 MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEG 585
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K F M + +G+ P +HYACM+DL GR G++ EA++L+ +M ++PD+ +W LL +CR
Sbjct: 586 RKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACR 645
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H LAE AAT L +LEP +++ +V +SN+Y S +N IRK MK + K PG
Sbjct: 646 VHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGC 705
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SW+EI +RV+ F S + HP+ I+ K++E+I ++K GYVP+ S +LHD+++E KE
Sbjct: 706 SWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVG 765
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L +HSEKLA+ F ++ + IRI KN+R+C DCH+ MK S + + I++RDSN
Sbjct: 766 LAYHSEKLAVAFGLL----AAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSN 821
Query: 574 RFHHFKDRICSCNDYW 589
FHHF++ CSC DYW
Sbjct: 822 CFHHFREGECSCGDYW 837
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 194/394 (49%), Gaps = 63/394 (15%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALIS------------------ 81
+ ++ TN L+N +K G ++DAR LFD+MP+++ SW +IS
Sbjct: 63 ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122
Query: 82 -------------GYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGK 123
GY + G E F LF S+ L+ + ++F+L SVL C L G+
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGE 182
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEF--RNVISWNSMIAAFRA 180
++H +K + +V+V L++MY+K C EA +F+ +EF +N + W +M+ +
Sbjct: 183 MIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGY-- 240
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ + +A+ FR + +G+ + TF +L AC+ ++ VH
Sbjct: 241 -----------AQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHG 289
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I K GF + + +AL+ YA+CG + +K + + M D+VSWNS++ + HG +E
Sbjct: 290 FIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEE 349
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG--NKVFHSMLENHGVVPQLDHYAC 355
AL+LF NM N++ D TF S+L+ C + + + + EN+ +V
Sbjct: 350 ALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSN-----A 404
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+VD+ + G + A + +M +E D + W+ L+
Sbjct: 405 LVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLV 437
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/623 (35%), Positives = 341/623 (54%), Gaps = 61/623 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++T+ + G + Q+H ++ F +FV + L++MYAK G + A +FD
Sbjct: 141 FSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAY---VFVGSSLVDMYAKMGLVSVASQVFD 197
Query: 67 EMPKRNVV-------------------------------SWTALISGYAQHGNAEECFRL 95
E+ +RNVV SWT +I+G Q+G E L
Sbjct: 198 EVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDL 257
Query: 96 FCSLLQYFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK 150
F + Q ++++ SVL +C L GK +H L ++ + +V+V +AL++MY K
Sbjct: 258 FRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCK 317
Query: 151 -SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
A VF+ M +NV+SW +M+ + +A+ +F M QR
Sbjct: 318 CRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDM-------------QR 364
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
G+ PD T V+ +CA L + + H G ++NALI Y +CGSI
Sbjct: 365 NGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIED 424
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSH 326
S Q+FD+M++ D VSW +++ YA G+A E + LF M VQ PD+ TF+++LSACS
Sbjct: 425 SNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSR 484
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
AGLV+ G + F SML++HG++P DHY CM+DL GR GR+ EA+ I +MP PDS+ W+
Sbjct: 485 AGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWA 544
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL SCR +G + + AA L +L+P + G++ +S+IY G ++ +R+ M+
Sbjct: 545 TLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKG 604
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
RK PG SWI+ +++V+ F++ + P + I+ +LE+L ++ GYVP+ S LHD+E
Sbjct: 605 ARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVE 664
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
+ K + L HHSEKLA+ F ++ IR++KN+R+C DCHN K S + +E
Sbjct: 665 DSEKMKMLNHHSEKLAIAFGLL----FIPHGLPIRVVKNLRVCGDCHNATKYISKISQRE 720
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+VRD+ RFH FKD CSC D+W
Sbjct: 721 ILVRDAVRFHLFKDGTCSCGDFW 743
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 223/443 (50%), Gaps = 65/443 (14%)
Query: 15 CALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK---- 70
C N QA +LH +I + N + F+ N+LIN Y+K G + ARH+FD+MP+
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNP--ETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 71 ---------------------------RNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
R+ VSW +LISGY +G+ E + + S+++
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 104 FPN----EFSLASVLIS---CDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
N FS +L+S C L G+ +H +KF A+V+V ++L++MY+K
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDL-GRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSV 191
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN------------------E 197
A +VF+ ++ RNV+ +N+MI + + LF MK E
Sbjct: 192 ASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLE 251
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
EA+ LFR +++EGMA D TF VL AC GL + +H+LI + G+ + + +AL
Sbjct: 252 AEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
+ Y +C S+ ++ VF +M ++VSW ++L Y +G ++EA+++F +M ++PD
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T S++S+C++ ++EG + FH G++ + ++ L G+ G I ++ +L
Sbjct: 372 FTLGSVISSCANLASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430
Query: 375 EMPMEPDSVIWSVLLGSCRKHGE 397
EM D V W+ L+ + G+
Sbjct: 431 EMSFR-DEVSWTALVSGYAQFGK 452
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 151/357 (42%), Gaps = 59/357 (16%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
K +H L +K + ++ N LIN YSK A VF+ M N SWN+M++A+
Sbjct: 23 QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYS 82
Query: 180 ACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREG-MAPDWCTFS 220
+ E+F+ M N + EA+ + + ++G + + TFS
Sbjct: 83 KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK---- 276
+L + +H I K+GF + ++L+ YA+ G +S++ QVFD+
Sbjct: 143 TMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER 202
Query: 277 ---------------------------MTYHDLVSWNSILKAYALHGQAKEALQLFSNMN 309
M D +SW +++ +G EA+ LF +M
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262
Query: 310 VQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ D TF S+L+AC ++EG ++ H+++ G + + +VD+ + +
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEI-HTLIIRSGYNHNVFVGSALVDMYCKCRSV 321
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLEPGD-SLGFV 420
AE + + M + V W+ +L ++G E + + +EP D +LG V
Sbjct: 322 RYAEAVFKRMA-NKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSV 377
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
K C + A +H LI K +T + N LI+AY++ G+I+ ++ VFDKM +
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
SWN++L AY+ G ++FS M D ++ SL+S G V E K ++SM+++
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMP-NRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKD 131
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/614 (36%), Positives = 343/614 (55%), Gaps = 47/614 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + ACA +++ QLH +I N P+ D +V + ++ +YAK G +A+ +
Sbjct: 291 STTYTSSLTACARLSSLEWGKQLHVQVIRNLPH--IDPYVASAMVELYAKCGCFKEAKRV 348
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DY 119
F + RN VSWT LI G+ Q+G E LF + + ++F+LA+++ C D
Sbjct: 349 FSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDI 408
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
G +H+L LK V V+N+LI+MY+K C + A +F M R+++SW MI A
Sbjct: 409 CLGSQLHSLCLKSGHTRAVVVSNSLISMYAK-CGNLQNAELIFNFMAERDIVSWTGMITA 467
Query: 178 FRACKLEAQAIELFAKMKN------------------EEEALFLFRQ-LQREGMAPDWCT 218
+ A+A E F M EE+ L ++ L + + PDW T
Sbjct: 468 YSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVT 527
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+ + + CA + + + K G DT + NA+I Y++CG IS +++ FD ++
Sbjct: 528 YVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLS 587
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNK 335
DLVSWN+++ Y+ HG K+A+++F N +PD ++V++LS CSH+GLV+EG
Sbjct: 588 RKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKF 647
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F M +H + P L+H++CMVDLLGR G ++EA+ LI EMPM+P + +W LL +C+ H
Sbjct: 648 YFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTH 707
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
G LAELAA L L+ S G++ ++ +Y +G + + +RK M+ ++K PG SW
Sbjct: 708 GNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSW 767
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
+E+ NRVH F + HPQ AI +KL+EL+ ++ +GYV E + E
Sbjct: 768 MEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVR---------TESPRSE--I 816
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HHSEKLA+ F IM+ + I IMKN+RIC DCH +KL S + +E V+RD RF
Sbjct: 817 HHSEKLAVAFGIMSLPAWMP----IHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRF 872
Query: 576 HHFKDRICSCNDYW 589
HHFK CSC DYW
Sbjct: 873 HHFKGGSCSCMDYW 886
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 183/415 (44%), Gaps = 35/415 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL HA G + A L I EP ++ N ++N YAK G L DA LF MP
Sbjct: 65 TLLHAYLSCGALSDARNLLRDEIT----EP-NVITHNIMMNGYAKLGSLSDAVELFGRMP 119
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL--HGKLV 125
R+V SW ++SGY Q G +F S+ Q PN F+ V+ SC L H +
Sbjct: 120 TRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVAL 179
Query: 126 HALAL--KFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
L L KF V AL++M + A D A K F ++ +I NSM+ +
Sbjct: 180 QLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSH 239
Query: 183 LEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLK 224
A+E+F M + EAL + + +G+ PD T++ L
Sbjct: 240 GVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLT 299
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA L + +H + + D +A+A++ YA+CG +K+VF + + VS
Sbjct: 300 ACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVS 359
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W ++ + +G E+++LF+ M + D +L+S C + + G++ HS+
Sbjct: 360 WTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQ-LHSLC 418
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G + ++ + + G + AE LI E D V W+ ++ + + G
Sbjct: 419 LKSGHTRAVVVSNSLISMYAKCGNLQNAE-LIFNFMAERDIVSWTGMITAYSQVG 472
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF-DKMTYHD 281
L++C A +HS + G + N L+HAY CG++S ++ + D++T +
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
+++ N ++ YA G +A++LF M + D A++ +++S +G +F SM
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTR-DVASWNTIMSGYYQSGQFLNALDIFVSMR 150
Query: 342 ENHGVVPQLDHYACMVDLLGRVG 364
+ +P + C++ G +G
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALG 173
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 322/556 (57%), Gaps = 29/556 (5%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YF 103
N L++MYAK G LD+AR +F+ + +R VVSW+A+I YA HG +E LF +
Sbjct: 24 NGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRV 83
Query: 104 FPNEFSLASVLISC----DYLHGKLVHALALKFS--LDAHVYVANALINMYSKSCA-DEA 156
PN + V +C D G+ +HALA+ ++ + NAL+NMY + + +EA
Sbjct: 84 EPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEA 143
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
KVF+ M+ + SW SMI A + EL EAL LF ++ EG+ P
Sbjct: 144 RKVFDTMDHPDAFSWTSMITAC------TENCELL-------EALELFHRMNLEGIPPTS 190
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T + VL ACA + +HS + GF + AL+ YA+CGS+ S +VF
Sbjct: 191 VTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTA 250
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEG 333
M + VSW +++ A A HGQ EAL+LF MN++ D+ TF+ +L ACSHAGL++E
Sbjct: 251 METRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKES 310
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ FHSM+E++ + P HY +D +GR GR+ +AE+LI MP P+++ W LL +CR
Sbjct: 311 LEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACR 370
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H + A A L +L P DS+ + + N+Y +G + +RK M ++K PG
Sbjct: 371 IHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGK 430
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S+IE++N+VHEF +G + HP R+ I +LE+L G+++ GYVP T LH + EE KE+
Sbjct: 431 SFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQL 490
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
+ HSEKLA+ F ++ + + I+KN+R+C DCH K+ + ++ + IVVRD++
Sbjct: 491 IGLHSEKLAIAFGLIATPP----GTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTH 546
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF+D CSC DYW
Sbjct: 547 RFHHFEDGQCSCKDYW 562
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 162/325 (49%), Gaps = 24/325 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +F+AC + +++Q ++H + + + + + N L+NMY + G L++AR +FD
Sbjct: 90 FTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDT 149
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----G 122
M + SWT++I+ ++ E LF + L+ P +LASVL +C G
Sbjct: 150 MDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVG 209
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRAC 181
K +H+ + V AL++MY+K + E + KVF ME RN +SW +MIAA
Sbjct: 210 KQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAA---- 265
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
A+ +EAL LF+++ EGM D TF VL+AC AGL+ E H
Sbjct: 266 ---------LAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKES-LEFFH 315
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQA 298
S++ Y + R G + ++++ M +H + ++W ++L A +H QA
Sbjct: 316 SMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQA 375
Query: 299 KEALQLFSNMN-VQPDSATFVSLLS 322
+ A ++ ++ + P+ + +LL
Sbjct: 376 ERATKVAELLSKLAPEDSMAYTLLG 400
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 11/216 (5%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+HS ++ GF T+ N L+ YA+CG + ++ +F+ + +VSW++++ AYALHG+
Sbjct: 7 IHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGR 66
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+EAL LF M V+P++ TF + +AC +++G ++ H++ G + +
Sbjct: 67 GQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREI-HALAMASGELKSSNAI 125
Query: 354 --ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
++++ R G + EA K+ M PD+ W+ ++ +C ++ E L L L
Sbjct: 126 LENALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITACTENCEL-LEALELFHRMNL 183
Query: 412 E--PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
E P S+ + N SG+ + I + S
Sbjct: 184 EGIPPTSVTLASVLNACACSGALKVGKQIHSRLDAS 219
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/591 (36%), Positives = 346/591 (58%), Gaps = 31/591 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+ L A +L + + Q+H H I N D FV+ LI+ Y++ + +A LF E
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIK--INNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 477
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGK 123
++V+W A+++GY Q + + +LF + Q ++F+LA+V +C +L GK
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRAC 181
VHA A+K D ++V++ +++MY K C D A F+++ + ++W +MI+ C
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVK-CGDMSAAQFAFDSIPVPDDVAWTTMISG---C 593
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ EE A +F Q++ G+ PD T + + KA + L +H+
Sbjct: 594 IENGE----------EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K +D + +L+ YA+CGSI + +F ++ ++ +WN++L A HG+ KE
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQLF M ++PD TF+ +LSACSH+GLV E K SM ++G+ P+++HY+C+ D
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LGR G + +AE LI M ME + ++ LL +CR G+T + ATKL +LEP DS
Sbjct: 764 ALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 823
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SN+Y + +++ +L R MKG +V+K PG SWIE++N++H F + + Q E I
Sbjct: 824 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
++K++++I +K GYVPET L D+EEE KE LY+HSEKLA+ F +++ +
Sbjct: 884 YRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPP----ST 939
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN+R+C DCHN MK + + +EIV+RD+NRFH FKD ICSC DYW
Sbjct: 940 PIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 186/369 (50%), Gaps = 28/369 (7%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V+N LINMY K AR +FD M +R+++SW ++I+G AQ+G E LF LL+
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 102 YFF-PNEFSLASVLISCDYLH-----GKLVHALALKFSLDAHVYVANALINMYSKS-CAD 154
P+++++ SVL + L K VH A+K + + +V+ ALI+ YS++ C
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA +FE F ++++WN+M+A + + ++LFA M ++G
Sbjct: 470 EAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALM-------------HKQGERS 515
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T + V K C L VH+ K G++ D +++ ++ Y +CG +S ++ F
Sbjct: 516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQ 331
D + D V+W +++ +G+ + A +FS M V PD T +L A S ++
Sbjct: 576 DSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 635
Query: 332 EGNKVFHSMLE-NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+G ++ + L+ N P + +VD+ + G I +A L + + M + W+ +L
Sbjct: 636 QGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLV 692
Query: 391 SCRKHGETR 399
+HGE +
Sbjct: 693 GLAQHGEGK 701
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 195/459 (42%), Gaps = 82/459 (17%)
Query: 32 INNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG---- 87
I F P+ F+ N+LI+MY+K G L AR +FD+MP R++VSW ++++ YAQ
Sbjct: 65 ILTFEENPER-FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVV 123
Query: 88 -NAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHGKLV------HALALKFSLDAHVY 139
N ++ F LF L Q + + +L+ +L C LH V H A K LD +
Sbjct: 124 ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC--LHSGYVWASESFHGYACKIGLDGDEF 181
Query: 140 VANALINMYSKSCADEAWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM---- 194
VA AL+N+Y K + KV FE M +R+V+ WN M+ A+ + +AI+L +
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 195 --KNEEEALFLFR---------QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
NE L R Q++ D + S ++ GL H+ +L+
Sbjct: 242 LNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLK 301
Query: 244 KYG------FEDDTVIANALIHAYARCGSISLSKQ------------------------- 272
+ E D V ++ + S++L +Q
Sbjct: 302 CFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 361
Query: 273 ----------VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
VFD M+ DL+SWNS++ A +G EA+ LF + ++PD T S
Sbjct: 362 KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 320 LLSACSH--AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
+L A S GL H++ N+ V ++D R + EAE L
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINN--VSDSFVSTALIDAYSRNRCMKEAEILFERHN 479
Query: 378 MEPDSVIWSVLL-GSCRKHGETRLAELAATKLKQLEPGD 415
D V W+ ++ G + H + +L A KQ E D
Sbjct: 480 F--DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSD 516
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 12/212 (5%)
Query: 110 LASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L + + S D + GK HA L F + ++ N LI+MYSK + A +VF+ M R++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SWNS++AA+ AQ+ E ++N ++A LFR L+++ + T S +LK C
Sbjct: 106 VSWNSILAAY------AQSSECV--VENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLH 157
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ + H K G + D +A AL++ Y + G + K +F++M Y D+V WN +
Sbjct: 158 SGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLM 217
Query: 289 LKAYALHGQAKEALQL---FSNMNVQPDSATF 317
LKAY G +EA+ L F + + P+ T
Sbjct: 218 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H+ I + + + N LI Y++CGS++ +++VFDKM DLVSWNSIL AYA +
Sbjct: 61 THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 298 A-----KEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
++A LF + V T +L C H+G V ++ FH G+
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW-ASESFHGYACKIGLDGD 179
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+V++ + G++ E + L EMP D V+W+++L
Sbjct: 180 EFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML 218
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/556 (38%), Positives = 325/556 (58%), Gaps = 29/556 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QY 102
++ L++MYAK G L+ AR LFD M +RNVVSW ++I Y Q+ N +E +F +L +
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEA 156
P + S+ L +C D G+ +H L+++ LD +V V N+LI+MY K C D A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK-CKEVDTA 391
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+F ++ R ++SWN+MI F A+ +AL F Q++ + PD
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGF-------------AQNGRPIDALNYFSQMRSRTVKPDT 438
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T+ V+ A A L HA +H ++ + + + + AL+ YA+CG+I +++ +FD
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 498
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M+ + +WN+++ Y HG K AL+LF M ++P+ TF+S++SACSH+GLV+ G
Sbjct: 499 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K F+ M EN+ + +DHY MVDLLGR GR+ EA I +MP++P ++ +LG+C+
Sbjct: 559 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H AE AA +L +L P D V ++NIY + + K +R M +RK PG
Sbjct: 619 IHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 678
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S +EI+N VH F SG HP + I+ LE+LI +K GYVP+T+L L +E + KE+
Sbjct: 679 SMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQL 737
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F ++N + + I + KN+R+C DCHN K S + G+EIVVRD
Sbjct: 738 LSTHSEKLAISFGLLNTTA----GTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQ 793
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFK+ CSC DYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 151/304 (49%), Gaps = 24/304 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q+ F L++++ ++G +D+A +F+ + + V + ++ G+A+ + ++ + F +
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126
Query: 100 -LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-- 152
P ++ +L C + GK +H L +K ++ L NMY+K C
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK-CRQ 185
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+EA KVF+ M R+++SWN+++A + + A+E+ + + E +
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV-------------KSMCEENL 232
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P + T VL A + L +H + GF+ I+ AL+ YA+CGS+ ++Q
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
+FD M ++VSWNS++ AY + KEA+ +F M V+P + + L AC+ G
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 330 VQEG 333
++ G
Sbjct: 353 LERG 356
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 162/344 (47%), Gaps = 24/344 (6%)
Query: 81 SGYAQHGNAEECFRLFCSLLQYFFPN--EFSLASVLISCDYLHG-KLVHALALKFSLDAH 137
S Q N R F S Y N E A +L C L + + L K L
Sbjct: 9 STVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQE 68
Query: 138 VYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
+ L++++ + DEA +VFE ++ + + +++M+ F AK+ +
Sbjct: 69 HFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGF-------------AKVSD 115
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
++AL F +++ + + P F+ +LK C R +H L+ K GF D
Sbjct: 116 LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
L + YA+C ++ +++VFD+M DLVSWN+I+ Y+ +G A+ AL++ +M N++P
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T VS+L A S L+ G ++ H G ++ +VD+ + G + A +L
Sbjct: 236 FITIVSVLPAVSALRLISVGKEI-HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL--KQLEPGD 415
M +E + V W+ ++ + ++ + A L K+ + ++P D
Sbjct: 295 DGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 153/324 (47%), Gaps = 32/324 (9%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
HACA G++++ +H+ + +++ V N LI+MY K +D A +F ++ R
Sbjct: 344 LHACADLGDLERGRFIHKLSVE--LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HGKLVH 126
+VSW A+I G+AQ+G + F + + P+ F+ SV+ + L H K +H
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ ++ LD +V+V AL++MY+K A A +F+ M R+V +WN+MI +
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIA 243
A+ELF +M Q+ + P+ TF V+ AC +GLV E + +
Sbjct: 522 AALELFEEM-------------QKGTIKPNGVTFLSVISACSHSGLV-EAGLKCFYMMKE 567
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQA---- 298
Y E A++ R G ++ + +M V+ + ++L A +H
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 627
Query: 299 KEALQLFSNMNVQPDSATFVSLLS 322
K A +LF + PD + LL+
Sbjct: 628 KAAERLFE---LNPDDGGYHVLLA 648
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/593 (36%), Positives = 335/593 (56%), Gaps = 32/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ C+ + +H +N D+ V LI MY G ++ AR +FD+
Sbjct: 266 FLSILDGCSTPEALAWGKAVHAQCMNT--GLVDDVRVATALIRMYMGCGSIEGARRVFDK 323
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHG 122
M R+VVSWT +I GYA++ N E+ F LF ++ + P+ + ++ +C D
Sbjct: 324 MKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLA 383
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF--R 179
+ +H+ ++ + V AL++MY+K A +A +VF+ M R+V+SW++MI A+
Sbjct: 384 REIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVEN 443
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C EEA F ++R + PD T+ +L AC L ++
Sbjct: 444 GCG---------------EEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIY 488
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K + NALI+ + GSI ++ +F+ M D+V+WN ++ Y+LHG A+
Sbjct: 489 TQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAR 548
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL LF M +P+S TFV +LSACS AG V+EG + F +L+ G+VP ++ Y CM
Sbjct: 549 EALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCM 608
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + EAE LI MP++P+S IWS LL +CR +G +AE AA + EP D
Sbjct: 609 VDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDG 668
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+VQ+S++Y +G + +RK M+ VRK G +WIE+E ++H F + HPQ
Sbjct: 669 AVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAG 728
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ +L L+ +K GY+P T LH++ E+ KEE + +HSEKLA+ + +++ S
Sbjct: 729 EIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPS---- 784
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCH+ K S + G+EI+ RD++RFHHFK+ +CSC DYW
Sbjct: 785 GAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 214/431 (49%), Gaps = 29/431 (6%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
++ Y LF C + + Q+ +H+I + +++ N LI +++ G + +AR
Sbjct: 61 SRTYVKLFQRCMMLRDAGLGKQVRDHIIQS--GRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHG- 122
FD + + VV+W A+I+GYAQ G+ +E F LF ++ + P+ + VL +C G
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Query: 123 ---KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
K HA +K + + AL++MY K + D A +VF+ + R+V ++N MI +
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
AK + E+A LF ++Q+EG P+ +F +L C+ AV
Sbjct: 239 -------------AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAV 285
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ G DD +A ALI Y CGSI +++VFDKM D+VSW +++ YA +
Sbjct: 286 HAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNI 345
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++A LF+ M +QPD T++ +++AC+ + + ++ HS + G L
Sbjct: 346 EDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREI-HSQVVRAGFGTDLLVDTA 404
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEP 413
+V + + G I +A ++ M D V WS ++G+ ++ GE K +EP
Sbjct: 405 LVHMYAKCGAIKDARQVFDAMSRR-DVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEP 463
Query: 414 GDSLGFVQMSN 424
D + ++ + N
Sbjct: 464 -DVVTYINLLN 473
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 334/590 (56%), Gaps = 30/590 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+ AC ++ +LH + I + D V N + YAK G L A +F M
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRH--GFQYDELVANGFVAAYAKCGMLICAERVFYSME 298
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HGKL 124
+ V SW ALI G AQ+G+ + L+ + P+ F++ S+L++ +L +GK
Sbjct: 299 TKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKE 358
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAAFRACK 182
VH L+ L+ ++ +L+++Y C + A +F+ ME ++ +SWN+MI+ +
Sbjct: 359 VHGFVLRHGLEIDSFIGISLLSLYIH-CGESSSARLLFDGMEEKSSVSWNAMISGYSQNG 417
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
L E+AL LFR+L +G P VL AC+ R H
Sbjct: 418 LP-------------EDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYA 464
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K +D +A + I YA+ G I S+ VFD + DL SWN+I+ AY +HG +E++
Sbjct: 465 LKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESI 524
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF M PD TF+ +L+ CSHAGLV+EG K F+ M HG+ P+L+HYAC++D+
Sbjct: 525 ELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDM 584
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR GR+ +A +L+ EMP +PDS +WS LL CR GE + ++ A KL +LEP + +
Sbjct: 585 LGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENY 644
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V +SN+Y SG ++ R +R+ +K ++K G SWIE+ +VH F +G PQ + +
Sbjct: 645 VSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMS 704
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+L ++ +GY P TS LHD++EE K E+L HSEKLA+ F ++N + +
Sbjct: 705 MTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNT----TKGTT 760
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+RICVDCHN K S++ G+EI++RD+ RFHHFKD +CSC DYW
Sbjct: 761 LRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 200/392 (51%), Gaps = 35/392 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV N LI MY KFG++D A +F MP RN+VSW ++ISG++++G +++CF + ++
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124
Query: 101 ---QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ P+ +L +VL C D G +H LA+K L V V N+L++MYSK C
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSK-CG 183
Query: 154 --DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ-RE 210
EA +F+ +N +SWN+MI +F EA LFR++Q +E
Sbjct: 184 YLTEAQMLFDKNNRKNAVSWNTMIGGL------CTKGYIF-------EAFNLFREMQMQE 230
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ + T +L AC + R +H ++GF+ D ++AN + AYA+CG + +
Sbjct: 231 DIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICA 290
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHA 327
++VF M + SWN+++ A +G ++AL L+ M + PD T SLL A +H
Sbjct: 291 ERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHL 350
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
++ G +V H + HG+ ++D + ++ L G A L M E SV W
Sbjct: 351 KSLRYGKEV-HGFVLRHGL--EIDSFIGISLLSLYIHCGESSSARLLFDGME-EKSSVSW 406
Query: 386 SVLLGSCRKHGETRLAELAATKL--KQLEPGD 415
+ ++ ++G A + KL +P D
Sbjct: 407 NAMISGYSQNGLPEDALILFRKLVSDGFQPSD 438
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 197/411 (47%), Gaps = 35/411 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L T+ CA +++ +++H + +E D+ V N L++MY+K GYL +
Sbjct: 130 LLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSE--DVRVNNSLVDMYSKCGYLTE 187
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--CSLLQYFFPNEFSLASVLISCD 118
A+ LFD+ ++N VSW +I G G E F LF + + NE ++ ++L +C
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL 247
Query: 119 YLHG----KLVHALALKFSLDAHVYVANALINMYSKS----CADEAWKVFENMEFRNVIS 170
+ K +H +++ VAN + Y+K CA+ +VF +ME + V S
Sbjct: 248 EISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAE---RVFYSMETKTVNS 304
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
WN++I C A+ + +AL L+ Q+ G+ PDW T +L A A L
Sbjct: 305 WNALIG---GC----------AQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLK 351
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+ R+ VH + ++G E D+ I +L+ Y CG S ++ +FD M VSWN+++
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMIS 411
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
Y+ +G ++AL LF + QP VS+L ACS ++ G + L+ ++
Sbjct: 412 GYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALK--ALL 469
Query: 348 PQLDHYAC-MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ AC +D+ + G I E+ + + D W+ ++ + HG+
Sbjct: 470 MEDVFVACSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGD 519
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 144/310 (46%), Gaps = 26/310 (8%)
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
F + F+ V+ +C D G+++H + +K L V+V NALI MY K D A
Sbjct: 27 FNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAV 86
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
KVF M RN++SWNS+I+ F ++ +M EE G+ PD
Sbjct: 87 KVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEE-----------GLLPDIA 135
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T VL CA V + +H L K G +D + N+L+ Y++CG ++ ++ +FDK
Sbjct: 136 TLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKN 195
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD----SATFVSLLSACSHAGLVQEG 333
+ VSWN+++ G EA LF M +Q D T +++L AC ++
Sbjct: 196 NRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRS- 254
Query: 334 NKVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
K H HG Q D V + G ++ AE++ M + + W+ L+G
Sbjct: 255 LKELHGYSIRHGF--QYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS-WNALIGG 311
Query: 392 CRKHGETRLA 401
C ++G+ R A
Sbjct: 312 CAQNGDPRKA 321
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 338/591 (57%), Gaps = 39/591 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L G + +A +L + M + +D+ +++ Y + G + +AR LFDE
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMPD------RDVVAWTAMLSGYCQAGRITEARALFDE 199
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVH 126
MPKRNVVSWTA+ISGYAQ+G +LF + + NE S ++L+ Y+ G +
Sbjct: 200 MPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER---NEVSWTAMLVG--YIQAGHVED 254
Query: 127 ALALKFSLDAHVYVA-NAL-INMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A L ++ H A NA+ + + D A VFE M R+ +W++MI A+
Sbjct: 255 AAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYE----- 309
Query: 185 AQAIELFAKMKNE--EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+NE EAL FR++ G+ P++ + +L CA L + VH+ +
Sbjct: 310 ----------QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAM 359
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ F+ D +ALI Y +CG++ +K+VF D+V WNS++ YA HG ++AL
Sbjct: 360 LRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQAL 419
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F +M + PD T++ L+ACS+ G V+EG ++F+SM N + P +HY+CMVDL
Sbjct: 420 GIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDL 479
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G + EA LI+ MP+EPD+VIW L+G+CR H +AE AA KL +LEPG++ +
Sbjct: 480 LGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPY 539
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAI 478
V +S+IY G + A +RK + + K PG SWIE + RVH F SG HP+ AI
Sbjct: 540 VLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAI 599
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ LE+L G L GY + S LHDI+EE K L +HSE+ A+ + ++ E
Sbjct: 600 LRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLK----IPEGM 655
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+R+C DCH+ +KL + + +EI++RD+NRFHHFKD CSC DYW
Sbjct: 656 PIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 181/450 (40%), Gaps = 63/450 (14%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--------- 96
N I A+ G ++ AR F+ MP R S+ AL++GY ++ + LF
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 97 --------------------CSLLQYFFPNEFSLASVLISCDYLHGKLVHALAL--KFSL 134
+L FP + L+ HG L A+ L +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 135 DAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
HV L + +EA ++F+ M R+V++W +M++ + +A LF +M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 195 KN--------------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + L R+L + +++ +L G + H
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML---VGYIQAGHVEDAAE 257
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L E NA++ + + G + +K VF+KM D +W++++KAY + E
Sbjct: 258 LFNAMP-EHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLME 316
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA--C 355
AL F M V+P+ + +S+L+ C+ ++ G +V +ML +D +A
Sbjct: 317 ALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR---CSFDMDVFAVSA 373
Query: 356 MVDLLGRVGRILEAEKLIREMPMEP-DSVIWSVLLGSCRKH--GETRLAELAATKLKQLE 412
++ + + G + +A+++ EP D V+W+ ++ +H GE L +L +
Sbjct: 374 LITMYIKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
P D + ++ +G + R I M
Sbjct: 432 P-DGITYIGALTACSYTGKVKEGREIFNSM 460
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 328/559 (58%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV N L++ Y+K LDD R LFDEMP+R+ VS+ +I+ YA + A RLF +
Sbjct: 468 NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ 527
Query: 101 QYFFPNEF----SLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ F + ++ SV S +H GK +HA + L + + NALI+MYSK C
Sbjct: 528 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSK-CGML 586
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D A F N ++ ISW ++I + + EEAL LF ++R G+
Sbjct: 587 DAAKSNFSNRSEKSAISWTALITGY-------------VQNGQHEEALQLFSDMRRAGLR 633
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD TFS ++KA + L +HS + + G++ + L+ YA+CG + + +
Sbjct: 634 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 693
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD+M + +SWN+++ AYA +G+AK A+++F M PDS TF+S+L+ACSH GL
Sbjct: 694 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 753
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
E K FH M + + P +HYAC++D LGRVG + +K++ EMP + D +IW+ +L
Sbjct: 754 DECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILH 813
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
SCR HG LA +AA KL +EP D+ +V +SNIY +G + A ++K M+ VRK
Sbjct: 814 SCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKE 873
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G SW+EI+ +++ FAS P + I +L+ L ++ GY P+ + ALH ++ E K
Sbjct: 874 SGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELK 933
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E L +HSE+LA+ FA+MN + + IRIMKN+ C+DCH +K+ S ++ ++I+VR
Sbjct: 934 LESLKYHSERLAIAFALMNTPA----GTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVR 989
Query: 571 DSNRFHHFKDRICSCNDYW 589
DS RFHHFKD +CSC DYW
Sbjct: 990 DSRRFHHFKDGVCSCGDYW 1008
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 170/375 (45%), Gaps = 45/375 (12%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
M + P+ +++F N +++ Y+ G L A+HLF P RN +WT ++ +A G
Sbjct: 279 MFDQMPH--KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTS 336
Query: 91 ECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV---HALALKFSLDAHVYVANALIN 146
+ LF ++L + P+ ++ +VL L G V H A+KF LD HV+V N L++
Sbjct: 337 DALSLFRAMLGEGVIPDRVTVTTVL----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLD 392
Query: 147 MYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
Y K A +VF M ++ +++N+M+ L QA++LFA M+ +
Sbjct: 393 AYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLH 452
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
LQ H+ + + + + + N+L+ Y++C
Sbjct: 453 LLQYS-----------------------HSRSRSTSVL------NVFVNNSLLDFYSKCD 483
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+ +++FD+M D VS+N I+ AYA + A L+LF M + ++LS
Sbjct: 484 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 543
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
V G ++ H+ L G+ + ++D+ + G +L+A K E +
Sbjct: 544 VAGSLPDVHIGKQI-HAQLVLLGLASEDLLGNALIDMYSKCG-MLDAAKSNFSNRSEKSA 601
Query: 383 VIWSVLLGSCRKHGE 397
+ W+ L+ ++G+
Sbjct: 602 ISWTALITGYVQNGQ 616
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 46/287 (16%)
Query: 137 HVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
+++ N +++ YS S A +F + RN +W M+ A A
Sbjct: 287 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAH-------------AAAG 333
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
+AL LFR + EG+ PD T + VL V H A+ K+G + + N
Sbjct: 334 RTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAI-----KFGLDTHVFVCN 388
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA 315
L+ AY + G ++ +++VF +M D V++N+++ + G +ALQLF+ M S
Sbjct: 389 TLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSR 448
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA---CMVDLLGRVGRILEAEKL 372
+ LL SH+ V + + N LD Y+ C+ D+ +L
Sbjct: 449 HPLHLLQY-SHS--RSRSTSVLNVFVNNS----LLDFYSKCDCLDDM----------RRL 491
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
EMP E D+V ++V++ + + + AAT L+ LGF
Sbjct: 492 FDEMP-ERDNVSYNVIIAAYAWN------QCAATVLRLFREMQKLGF 531
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+P W ++ A G+V + S+ + GF+ T N + + G + ++
Sbjct: 222 SPPWKEYA---PAAPGVVPLKQPSSQAAPAGVTGFDVLTYRLNLGLRSLLSSGHLHRARA 278
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQE 332
+FD+M + ++ S N IL AY+ G A LF + + ++ T+ ++ A + AG +
Sbjct: 279 MFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSD 337
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLG 361
+F +ML GV+P +++L G
Sbjct: 338 ALSLFRAML-GEGVIPDRVTVTTVLNLPG 365
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/552 (39%), Positives = 332/552 (60%), Gaps = 31/552 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPN 106
LI+M+ + L+ AR +FDEM +VVSWTA++S A++ + +E LF + L+ P+
Sbjct: 578 LISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPD 637
Query: 107 EFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVF 160
+F+LA+ L +C GK++HA + L+A + V NAL+NMYS +C D EA F
Sbjct: 638 KFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYS-NCGDWREALSFF 696
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E M+ R+++SWN M AA+ A+ +EA+ LFR +Q EG+ PD TFS
Sbjct: 697 ETMKARDLVSWNIMSAAY-------------AQAGLAKEAVLLFRHMQLEGVKPDKLTFS 743
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
L G H L A+ G + D +A L+ YA+CG + + +F
Sbjct: 744 TTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQW 803
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+V N+I+ A A HG ++EA+++F M V+PD AT VS++SAC HAG+V+EG F
Sbjct: 804 TVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSF 863
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+M E G+ P L+HYAC VDLLGR G++ AE++IR+MP E ++++W+ LLG+C+ G+
Sbjct: 864 LTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGD 923
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
L E A ++ +L+P +S V +SNIYC +G + A + RK++ V+ PG+SW+E
Sbjct: 924 AELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLE 983
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHH 517
I +VHEF +G + HPQ + I+ L++L ++ GY + L D E+E KE+ L +H
Sbjct: 984 IGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKGL---DAEDELKEKALGYH 1040
Query: 518 SEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHH 577
SE++A+ F ++ + ++I+KN+R+C DCH K S ++G+EI+VRDS RFHH
Sbjct: 1041 SERIAIAFGLIAT----PPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHH 1096
Query: 578 FKDRICSCNDYW 589
F + CSC D W
Sbjct: 1097 FSNGTCSCKDCW 1108
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 205/403 (50%), Gaps = 34/403 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y L +C ++ + + HE + N Q LF+ N LINMY + G L++A +F
Sbjct: 26 QEYTALLQSCVDSNDLAKGKRAHELIAN--AGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DY 119
+M +RNVVSWTALIS AQ G F LF ++L PN ++L ++L +C D
Sbjct: 84 SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 120 LHGKLVHALALKFSLD----AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
G+ +HA+ + L+ V NA+INMY+K ++A VF + ++V+SW +M
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAM 203
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
A+ AQ + +AL +FR++ + +AP+ TF L AC L R
Sbjct: 204 AGAY------AQERRFY------PDALRIFREMLLQPLAPNVITFITALGACTSL---RD 248
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH---DLVSWNSILKA 291
+ +HSL+ + G D + NALI+ Y +CG + VF M DLVSWN+++ A
Sbjct: 249 GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA 308
Query: 292 YALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
G+ +A+ +F + ++ P+S T +++L+A + +G+ + FH + G +
Sbjct: 309 SVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLR 368
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ ++ + + G A + R + + D + W+ +LG+
Sbjct: 369 DVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 186/414 (44%), Gaps = 37/414 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFC- 97
+D+ V N +I+MYAK G+ A +F + K +V+SW ++ + + F
Sbjct: 368 RDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHH 427
Query: 98 SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLD-AHVYVANALINMYSKSC 152
LL PN+ S ++L +C G+ +H+L L D VA L++MY K C
Sbjct: 428 MLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGK-C 486
Query: 153 AD--EAWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
EA VF+ M R++++WN M+ A+ A+ +EA ++
Sbjct: 487 GSIAEAELVFKEMPLPSRSLVTWNVMLGAY-------------AQNDRSKEAFGALMEML 533
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ G+ PD +F+ VL +C + A + I + G+ + ALI + RC +
Sbjct: 534 QGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILESGYRS-ACLETALISMHGRCRELE 589
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACS 325
++ VFD+M + D+VSW +++ A A + KE LF M ++ PD T + L C
Sbjct: 590 QARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCL 649
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
+ + G K+ H+ + G+ + ++++ G EA M D V W
Sbjct: 650 DSTTLGLG-KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR-DLVSW 707
Query: 386 SVLLGSCRKHGETRLAEL--AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
+++ + + G + A L +L+ ++P D L F N+ S + +L
Sbjct: 708 NIMSAAYAQAGLAKEAVLLFRHMQLEGVKP-DKLTFSTTLNVSGGSALVSDGKL 760
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 25/269 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V N L+NMY+ G +A F+ M R++VSW + + YAQ G A+E LF +
Sbjct: 672 DIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQ 731
Query: 100 LQYFFPNEFSLASVL----ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
L+ P++ + ++ L S GKL H LA + LD+ V VA L+ +Y+K C
Sbjct: 732 LEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAK-CGKL 790
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
DEA +F V+ N++I A A+ EEA+ +F ++Q+EG+
Sbjct: 791 DEAISLFRGACQWTVVLLNAIIGA-------------LAQHGFSEEAVKMFWKMQQEGVR 837
Query: 214 PDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
PD T ++ AC AG+V E S+ ++ +G + R G + ++
Sbjct: 838 PDVATLVSIISACGHAGMV-EEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAE 896
Query: 272 QVFDKMTYHD-LVSWNSILKAYALHGQAK 299
Q+ KM + D + W S+L L G A+
Sbjct: 897 QIIRKMPFEDNTLVWTSLLGTCKLQGDAE 925
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R A D ++ +L++C H LIA G E + N LI+ Y RCGS+
Sbjct: 18 RVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLE 77
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSAC 324
+ +F KM ++VSW +++ A A G A LF M + P+S T V++L+AC
Sbjct: 78 EAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNAC 137
Query: 325 SHAGLVQEGNKVFHSM-----LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+++ + G + H+M LE L A M+++ + G +A + +P E
Sbjct: 138 ANSRDLAIGRSI-HAMIWELGLERESTTATLVGNA-MINMYAKCGSPEDAIAVFLTIP-E 194
Query: 380 PDSVIWSVLLGS 391
D V W+ + G+
Sbjct: 195 KDVVSWTAMAGA 206
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/562 (39%), Positives = 332/562 (59%), Gaps = 30/562 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ LI YA GY+ A+ +FDE+P ++VVSW A+ISGYA+ GN +E LF +
Sbjct: 152 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 211
Query: 100 LQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
++ P+E ++ SV+ +C G+ VH+ +++ + NALI++Y K C +
Sbjct: 212 MKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIK-CGE 270
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +FE + +++VISWN++I + M +EAL LF+++ R G
Sbjct: 271 VETACGLFEGLSYKDVISWNTLIGGY-------------THMNLYKEALLLFQEMLRSGE 317
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLS 270
+P+ T +L ACA L +H I K G + + +LI YA+CG I +
Sbjct: 318 SPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAA 377
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHA 327
+QVFD + L SWN+++ +A+HG+A A +FS M ++PD TFV LLSACSH+
Sbjct: 378 QQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHS 437
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G++ G +F SM E++ + P+L+HY CM+DLLG G EAE++I M MEPD VIW
Sbjct: 438 GMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCS 497
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +C+ HG L E A L ++EP + +V +SNIY +G +N+ IR + +
Sbjct: 498 LLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGM 557
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS L ++EE
Sbjct: 558 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 617
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S + +EI
Sbjct: 618 EWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLISKIYKREI 673
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+ RD RFHHF+D +CSCNDYW
Sbjct: 674 IARDRTRFHHFRDGVCSCNDYW 695
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 199/420 (47%), Gaps = 34/420 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F+ + + N++ W + G+A + L+ C + PN ++ +
Sbjct: 35 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFL 94
Query: 114 LISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D +YV +LI+MY ++ ++A KVF+ R+V
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 169 ISWNSMIAAFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQRE 210
+S+ ++I + + A A ++F A+ N +EAL LF+++ +
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 214
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ ACA + VHS I +GF + I NALI Y +CG + +
Sbjct: 215 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 274
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F+ ++Y D++SWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 275 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 334
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G ++ G + H + GV H ++D+ + G I EA + + + + W
Sbjct: 335 GAIEIG-RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI-EAAQQVFDSILNRSLSSW 392
Query: 386 SVLLGSCRKHGETRLAELAATKLK--QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ ++ HG A ++++ ++EP D + FV + + SG + R I + MK
Sbjct: 393 NAMIFGFAMHGRANAAFDIFSRMRKNEIEP-DDITFVGLLSACSHSGMLDLGRHIFRSMK 451
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 53/307 (17%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE----AWKVFENMEFRNVISWNSMIAAF 178
+++HA +K L Y + LI S + A VFE ++ N++ WN+M F
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTM---F 60
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
R L + + AL+L+ + G+ P+ TF +LK+CA R +
Sbjct: 61 RGHALSSDPVS----------ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 110
Query: 239 HSLIAKYGF--------------------ED-----------DTVIANALIHAYARCGSI 267
H + K G+ ED D V ALI YA G I
Sbjct: 111 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 170
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ ++++FD++ D+VSWN+++ YA G KEAL+LF M NV+PD +T VS++SAC
Sbjct: 171 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 230
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ + ++ G +V HS +++HG L ++DL + G + A L + + D +
Sbjct: 231 AQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVIS 288
Query: 385 WSVLLGS 391
W+ L+G
Sbjct: 289 WNTLIGG 295
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 239/683 (34%), Positives = 362/683 (53%), Gaps = 103/683 (15%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHM-INNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L S Y L CA + QA +L HM +N F +P+D F+ N L+++YAKFG L D
Sbjct: 19 LASFDDYTRLVLHCARANDFIQAKRLQSHMELNLF--QPKDSFIHNQLLHLYAKFGKLSD 76
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-----LQY------------- 102
A+++FD M KR+V SW L+S YA+ G E +F + + Y
Sbjct: 77 AQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHS 136
Query: 103 --------------FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANAL 144
F P ++S + L +C D HGK +H + L + +V NA+
Sbjct: 137 GKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAM 196
Query: 145 INMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK------- 195
+MY+K C D +A +F+ M +NV+SWN MI+ + + I LF +M+
Sbjct: 197 TDMYAK-CGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPD 255
Query: 196 ----------------------------------------------NEEEALFLFRQLQR 209
EE+A LF + R
Sbjct: 256 LVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLR 315
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ PD T S ++ +CA L + H VH + G ++ ++++AL+ Y +CG
Sbjct: 316 RNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLD 375
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++ +F+ M ++++WN+++ YA +GQ EAL L+ M N +PD+ TFV +LSAC +
Sbjct: 376 ARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACIN 435
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
A +V+EG K F S+ E HG+ P LDHYACM+ LLGR G + +A LI+ MP EP+ IWS
Sbjct: 436 ADMVKEGQKYFDSISE-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWS 494
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL C K G+ + AELAA+ L +L+P ++ ++ +SN+Y G + ++R MK
Sbjct: 495 TLLSVCAK-GDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKN 553
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
+K+ SW+E+ N+VH F S HP+ I+ +L LI L+ +GY P+T++ LH++
Sbjct: 554 AKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVG 613
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE K + +HSEKLAL FA++ + + + IRI+KNIR+C DCH FMK AS + +
Sbjct: 614 EEEKFRSISYHSEKLALAFALIRKPNGV---APIRIIKNIRVCDDCHVFMKFASITISRP 670
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I++RDSNRFHHF CSCND W
Sbjct: 671 IIMRDSNRFHHFFGGKCSCNDNW 693
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/604 (36%), Positives = 348/604 (57%), Gaps = 55/604 (9%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S+ + + HACAL + + D+ + N L++MY + G ++ARH
Sbjct: 337 SSLRFGRMIHACALEKGLDR-----------------DIVLGNALLDMYTRCGSPEEARH 379
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD---- 118
LF+ +P N VSW +I+G +Q G + LF + L+ P + ++L +
Sbjct: 380 LFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPE 438
Query: 119 ----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFEN--MEFR-NVI 169
G+ +H+ + + + A++ MY+ SC DEA F+ ME R +V+
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYA-SCGAIDEAAASFQRGAMEDRHDVV 497
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SWN++I++ ++ + + AL FR++ G+AP+ T VL ACAG
Sbjct: 498 SWNAIISSL-------------SQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGA 544
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSI 288
VH + G E + +A AL Y RCGS+ ++++F+K+ D+V +N++
Sbjct: 545 AALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAM 604
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ AY+ +G A EAL+LF M +PD +FVS+LSACSH GL EG ++F SM +++G
Sbjct: 605 IAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYG 664
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ P DHYAC VD+LGR G + +AE+LIR M ++P ++W LLG+CRK+ + LA
Sbjct: 665 IAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLAN 724
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
+ +++L+PGD +V +SNI +G +++A +R EM+ +RK G SWIEI++RVHEF
Sbjct: 725 SMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEF 784
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
+G + HP+ E I+++LE L +++ +GYVP+T L L ++E KE L HSE+LA+
Sbjct: 785 VAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIAL 844
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
+M+ + +R+MKN+R+C DCHN K S ++ KEIVVRD++RFHHF D CSC
Sbjct: 845 GVMSSST-----DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSC 899
Query: 586 NDYW 589
DYW
Sbjct: 900 GDYW 903
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 209/400 (52%), Gaps = 30/400 (7%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL ++ I+QA +H I Q L V+ L + YA+ G+LD A+ +FD
Sbjct: 230 TLVITLSVCAKIRQARAIHS--IVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAA 287
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-GKLVHA 127
+R+VVSW A++ YAQHG+ E LF +L + P++ +L + C L G+++HA
Sbjct: 288 ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHA 347
Query: 128 LALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
AL+ LD + + NAL++MY++ +EA +FE + N +SWN+MIA
Sbjct: 348 CALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAG--------- 397
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA----VHSLI 242
++ + AL LF+++Q EGMAP T+ +L+A A E A A +HS I
Sbjct: 398 ----SSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRI 453
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY---HDLVSWNSILKAYALHGQAK 299
G+ + I A++ YA CG+I + F + HD+VSWN+I+ + + HG K
Sbjct: 454 VSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGK 513
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
AL F M+ V P+ T V++L AC+ A + EG + H L + G+ + +
Sbjct: 514 RALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG-VIVHDHLRHSGMESNVFVATAL 572
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ GR G + A ++ ++ +E D VI++ ++ + ++G
Sbjct: 573 ASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 195/390 (50%), Gaps = 36/390 (9%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
+ Q ++H +++ E + NHL+ +Y K L D +F + R+ SWT +I
Sbjct: 45 LSQGRRIHARIVSLGLEEE----LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTII 100
Query: 81 SGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLD 135
+ Y +HG A+ +F + Q + + +VL +C D G+ +HA ++ L+
Sbjct: 101 TAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLE 160
Query: 136 AHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
+AN L+++Y S C A +FE ME R+++SWN+ IAA AQ+ +L
Sbjct: 161 GKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAA------NAQSGDL---- 209
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
+ AL LF+++Q EG+ P T I L CA + R A A+HS++ + G E V++
Sbjct: 210 ---DMALELFQRMQLEGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVS 263
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
AL AYAR G + +K+VFD+ D+VSWN++L AYA HG EA LF+ M +
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P T V+ + CS ++ H+ G+ + ++D+ R G EA
Sbjct: 324 PSKVTLVNASTGCSSLRF----GRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARH 379
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
L +P ++V W+ ++ + G+ + A
Sbjct: 380 LFEGIP--GNAVSWNTMIAGSSQKGQMKRA 407
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 155/322 (48%), Gaps = 27/322 (8%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +HA + L+ + N L+ +Y K + +VF +E R+ SW ++I A+
Sbjct: 47 QGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAY- 103
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ + A+++F ++Q+EG+ D TF VLKACA L ++H
Sbjct: 104 ------------TEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ I + G E +V+AN L+H Y CG ++ + +F++M DLVSWN+ + A A G
Sbjct: 152 AWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLD 210
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
AL+LF M V+P T V LS C+ +++ + HS++ G+ L +
Sbjct: 211 MALELFQRMQLEGVRPARITLVITLSVCAK---IRQA-RAIHSIVRESGLEQTLVVSTAL 266
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
R+G + +A+++ + E D V W+ +LG+ +HG ++E A + L G
Sbjct: 267 ASAYARLGHLDQAKEVF-DRAAERDVVSWNAMLGAYAQHGH--MSEAALLFARMLHEGIP 323
Query: 417 LGFVQMSNIYCLSGSFNKARLI 438
V + N S R+I
Sbjct: 324 PSKVTLVNASTGCSSLRFGRMI 345
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/576 (37%), Positives = 331/576 (57%), Gaps = 29/576 (5%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
+P + L YA G LD + LF +V WTA+I G+A G E+ +
Sbjct: 5 KPPAXVPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYA 64
Query: 98 SLL-QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADE 155
+L Q PN F+ +S+L C GK +H+ A+K D+ +YV L+++Y++
Sbjct: 65 QMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVS 124
Query: 156 AWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEE---------------- 198
A ++F+ M ++++S +M+ + + +L+A + LF M+ +
Sbjct: 125 AQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV-LFDGMEERDGVCWNVMIDGYTQNGM 183
Query: 199 --EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
EAL LFR++ + P+ T VL AC L VHS I G + + + A
Sbjct: 184 PNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTA 243
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
L+ Y++CGS+ ++ VFDK+ D+V+WNS++ YA+ G ++EALQLF +M + P
Sbjct: 244 LVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPT 303
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
+ TF+ +LSAC H+G V EG +F+ M + +G+ P+++HY CMV+LLGR G + +A +L+
Sbjct: 304 NITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELV 363
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
+ M +EPD V+W LLG+CR HG+ L E L +S ++ +SNIY G+++
Sbjct: 364 KNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWD 423
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
+R MK S V+K PG S IE+ N+VHEF +GG HP+R+ I+ LEE+ G LK G
Sbjct: 424 GVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHG 483
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
Y P+T + LHDI E KE L HSEKLA+ F ++N + + I+I+KN+R+C DCH
Sbjct: 484 YTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINT----QPGTTIKIVKNLRVCADCH 539
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KL S + G++IVVRD NRFHHF + CSC DYW
Sbjct: 540 EVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 176/353 (49%), Gaps = 36/353 (10%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVT-NHLINMYAKFGYLDDARHLF 65
+ L A G++ A QL + M P+ V+ ++ YAK G LD AR LF
Sbjct: 108 VRTGLLDVYARGGDVVSAQQLFDTM-------PEKSLVSLTAMLTCYAKHGELDAARVLF 160
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYL---- 120
D M +R+ V W +I GY Q+G E LF +L+ PNE ++ SVL +C L
Sbjct: 161 DGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALE 220
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
G+ VH+ + +V+V AL++MYSK + ++A VF+ ++ ++V++WNSMI +
Sbjct: 221 SGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGY- 279
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASA 237
A+ F+ +EAL LF+ + R G+ P TF +L AC +G VTE
Sbjct: 280 -------AMXGFS-----QEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW-DI 326
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHG 296
+ + +YG E +++ R G + + ++ M D V W ++L A LHG
Sbjct: 327 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 386
Query: 297 Q---AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
+ ++ ++L + N+ +S T++ LLS A +G +M+++ GV
Sbjct: 387 KIALGEKIVELLVDQNLA-NSGTYI-LLSNIYAAVGNWDGVARLRTMMKDSGV 437
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/594 (35%), Positives = 342/594 (57%), Gaps = 33/594 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ + C G + H I D+ V N L+NMY+K G AR +F++M
Sbjct: 290 ILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 349
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLIS-----CDYL---- 120
+++SW ++IS AQ EE LF LL + P+ F+LAS+ ++ C L
Sbjct: 350 LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLD 409
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
GK +HA A+K D+ ++V + +++MY K C D A VF + + ++W SMI+
Sbjct: 410 QGKQIHAHAIKAGFDSDLHVNSGILDMYIK-CGDMVNAGIVFNYISAPDDVAWTSMISG- 467
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C NE++AL ++ ++++ + PD TF+ ++KA + + +
Sbjct: 468 --C----------VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQL 515
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + K D + +L+ YA+CG+I + ++F KM ++ WN++L A HG A
Sbjct: 516 HANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNA 575
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EA+ LF +M ++PD +F+ +LSACSHAGL E + HSM ++G+ P+++HY+C
Sbjct: 576 EEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSC 635
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VD LGR G + EA+K+I MP + + I LLG+CR G+ + A +L LEP D
Sbjct: 636 LVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFD 695
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S +V +SNIY + ++ RK MK V+K PG SWI+++N +H F + HPQ
Sbjct: 696 SAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQA 755
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+ K+EE++ ++ GYVP+T L D+E+E KE LY+HSEKLA+ + +++ +
Sbjct: 756 DIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPA--- 812
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+R+C DCHN +K S + +EIV+RD+NRFHHF+D +CSC DYW
Sbjct: 813 -STTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 213/406 (52%), Gaps = 46/406 (11%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV+ L+N+Y+K G + DAR LFD M +R+VV W ++ GY Q G +E F+LF
Sbjct: 217 DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 276
Query: 101 QYFF-PNEFSLASVLISC------DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
+ P+EFS+ +L C D GK VH +A+K LD+ V VAN+L+NMYSK C
Sbjct: 277 RSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 336
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A A +VF +M+ ++ISWNSMI++ L EEE++ LF L EG+
Sbjct: 337 AYFAREVFNDMKHLDLISWNSMISSCAQSSL-------------EEESVNLFIDLLHEGL 383
Query: 213 APDWCTF-SIVL----KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
PD T SI L KAC LV +H+ K GF+ D + + ++ Y +CG +
Sbjct: 384 KPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM 443
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ VF+ ++ D V+W S++ +G +AL+++ M V PD TF +L+ A
Sbjct: 444 VNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 503
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYA------CMVDLLGRVGRILEAEKLIREMPM 378
S +++G ++ H V +LD + +VD+ + G I +A +L ++M +
Sbjct: 504 SCVTALEQGRQL-------HANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV 556
Query: 379 EPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLEPGDSLGFVQM 422
+ +W+ +L +HG E + + K +EP D + F+ +
Sbjct: 557 R-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP-DRVSFIGI 600
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 191/379 (50%), Gaps = 40/379 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYA-----QHGNAEECFRL 95
D F++N+L+ MY+K G L AR +FD P+R++V+W A++ YA GNA+E L
Sbjct: 111 DHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL 170
Query: 96 FCSLLQYFF--PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYS 149
F LL+ +LA VL C + VH A+K L+ V+V+ AL+N+YS
Sbjct: 171 F-RLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYS 229
Query: 150 KSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K C +A +F+ M R+V+ WN M+ + LE +A +LF+ +
Sbjct: 230 K-CGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS-------------EF 275
Query: 208 QREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
R G+ PD + ++L C AG VH + K G + D +AN+L++ Y++ G
Sbjct: 276 HRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 335
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD-----SATF 317
+++VF+ M + DL+SWNS++ + A +E++ LF ++ ++PD S T
Sbjct: 336 CAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITL 395
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
+ AC L+ +G ++ H+ G L + ++D+ + G ++ A ++
Sbjct: 396 ATAAKACGCLVLLDQGKQI-HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYI 453
Query: 378 MEPDSVIWSVLLGSCRKHG 396
PD V W+ ++ C +G
Sbjct: 454 SAPDDVAWTSMISGCVDNG 472
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 14/288 (4%)
Query: 110 LASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L + + + + L GK HA + +++N L+ MYSK + A +VF+ R++
Sbjct: 84 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 143
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
++WN+++ A+ A + + N +E L LFR L+ + T + VLK C
Sbjct: 144 VTWNAILGAY--------AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLN 195
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
A VH K G E D ++ AL++ Y++CG + ++ +FD M D+V WN +
Sbjct: 196 SGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMM 255
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ-EGNKVFHSMLENH 344
LK Y G KEA QLFS ++PD + +L+ C AG E K H +
Sbjct: 256 LKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKS 315
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G+ + +V++ ++G A ++ +M D + W+ ++ SC
Sbjct: 316 GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISSC 362
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ATL A + ++Q QLH ++I + D FV L++MYAK G ++DA LF +
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIK--LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK 553
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKL-- 124
M RN+ W A++ G AQHGNAEE LF S+ + P+ S +L +C H L
Sbjct: 554 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS--HAGLTS 611
Query: 125 -----VHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAF 178
+H++ + ++ + + L++ ++ EA KV E M F+ S N A
Sbjct: 612 EAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINR--ALL 669
Query: 179 RACKLEAQ 186
AC+++
Sbjct: 670 GACRIQGD 677
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 338/591 (57%), Gaps = 39/591 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L G + +A +L + M + +D+ +++ Y + G + +AR LFDE
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMPD------RDVVAWTAMLSGYCQAGRITEARALFDE 199
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVH 126
MPKRNVVSWTA+ISGYAQ+G +LF + + NE S ++L+ Y+ G +
Sbjct: 200 MPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER---NEVSWTAMLVG--YIQAGHVED 254
Query: 127 ALALKFSLDAHVYVA-NAL-INMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A L ++ H A NA+ + + D A VFE M R+ +W++MI A+
Sbjct: 255 AAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYE----- 309
Query: 185 AQAIELFAKMKNE--EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+NE EAL FR++ G+ P++ + +L CA L + VH+ +
Sbjct: 310 ----------QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAM 359
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ F+ D +ALI Y +CG++ +K+VF D+V WNS++ YA HG ++AL
Sbjct: 360 LRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQAL 419
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F +M + PD T++ L+ACS+ G V+EG ++F+SM N + P +HY+CMVDL
Sbjct: 420 GIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDL 479
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G + EA LI+ MP+EPD+VIW L+G+CR H +AE AA KL +LEPG++ +
Sbjct: 480 LGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPY 539
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAI 478
V +S+IY G + A +RK + + K PG SWIE + RVH F SG HP+ AI
Sbjct: 540 VLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAI 599
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ LE+L G L GY + S LHDI+EE K L +HSE+ A+ + ++ E
Sbjct: 600 LRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLK----IPEGM 655
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+R+C DCH+ +KL + + +EI++RD+NRFHHFKD CSC DYW
Sbjct: 656 PIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 181/450 (40%), Gaps = 63/450 (14%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--------- 96
N I A+ G ++ AR F+ MP R S+ AL++GY ++ + LF
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 97 --------------------CSLLQYFFPNEFSLASVLISCDYLHGKLVHALAL--KFSL 134
+L FP + L+ HG L A+ L +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 135 DAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
HV L + +EA ++F+ M R+V++W +M++ + +A LF +M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 195 KN--------------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + L R+L + +++ +L G + H
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML---VGYIQAGHVEDAAE 257
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L E NA++ + + G + +K VF+KM D +W++++KAY + E
Sbjct: 258 LFNAMP-EHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLME 316
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA--C 355
AL F M V+P+ + +S+L+ C+ ++ G +V +ML +D +A
Sbjct: 317 ALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSF---DMDVFAVSA 373
Query: 356 MVDLLGRVGRILEAEKLIREMPMEP-DSVIWSVLLGSCRKH--GETRLAELAATKLKQLE 412
++ + + G + +A+++ EP D V+W+ ++ +H GE L +L +
Sbjct: 374 LITMYIKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
P D + ++ +G + R I M
Sbjct: 432 P-DGITYIGALTACSYTGKVKEGREIFNSM 460
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 343/593 (57%), Gaps = 35/593 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ AC G+++ +H++MI + D +N LINMYAK G L ++ +F M
Sbjct: 379 TSILQACGHLGDLEFGKYVHDYMITS--GYECDTTASNILINMYAKCGNLLASQEVFSGM 436
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC----DYLHGKL 124
++ VSW ++I+ Y Q+G+ +E +LF + P+ + +L D GK
Sbjct: 437 KCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKE 496
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA---FR 179
+H K ++++ V+N L++MY+K C + ++ KVFENM+ R++I+WN++IA+
Sbjct: 497 LHCDLAKMGFNSNIVVSNTLVDMYAK-CGEMGDSLKVFENMKARDIITWNTIIASCVHSE 555
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C L L + +++ EG+ PD T +L C+ L +R +H
Sbjct: 556 DCNL----------------GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH 599
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I K G E D + N LI Y++CGS+ S QVF M D+V+W +++ A ++G+ K
Sbjct: 600 GCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK 659
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+A++ F M + PD FV+++ ACSH+GLV+EG FH M +++ + P+++HYAC+
Sbjct: 660 KAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACV 719
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLL R + +AE I MP++PDS IW LL +CR G+T +A+ + ++ +L P D+
Sbjct: 720 VDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDT 779
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SN+Y G +++ R IRK +K ++K PG SW+EI+N+V+ F +G K Q E
Sbjct: 780 GYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFE 839
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
+ K L L G + GY+ LHDI+E+ K + L HSE+LA+ F ++N +
Sbjct: 840 EVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNT----KP 895
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +++MKN+R+C DCH K S + +E++VRD+NRFH FKD CSC DYW
Sbjct: 896 GTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 206/396 (52%), Gaps = 26/396 (6%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T + ++ +ACA + + A +H+ ++ DL++ N LI+MY +F LD AR +
Sbjct: 174 TYTFPSVINACAGLLDFEMAKSIHDRVLX--MGFGSDLYIGNALIDMYCRFNDLDKARKV 231
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL--- 120
F+EMP R+VVSW +LISGY +G E ++ P+ ++++SVL +C L
Sbjct: 232 FEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSV 291
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
G ++H L K + V V N L++MY K + + ++F+ M R+ +SWN+MI +
Sbjct: 292 EEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGY 351
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
L ++I+LF +M N+ PD T + +L+AC L V
Sbjct: 352 SQVGLYEESIKLFMEMVNQ--------------FKPDLLTITSILQACGHLGDLEFGKYV 397
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + G+E DT +N LI+ YA+CG++ S++VF M D VSWNS++ Y +G
Sbjct: 398 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSF 457
Query: 299 KEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA++LF M +V+PDS T+V LLS + G + G K H L G + +
Sbjct: 458 DEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLG-KELHCDLAKMGFNSNIVVSNTL 516
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
VD+ + G + ++ K+ M D + W+ ++ SC
Sbjct: 517 VDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASC 551
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 205/402 (50%), Gaps = 28/402 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC G++++ +H +I + +D+ V N L++MY KF L D R +FD+M
Sbjct: 279 SSVLRACGGLGSVEEGDIIH-GLIEKIGIK-KDVIVNNGLLSMYCKFNGLIDGRRIFDKM 336
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL----HGKL 124
R+ VSW +I GY+Q G EE +LF ++ F P+ ++ S+L +C +L GK
Sbjct: 337 VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKY 396
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACK 182
VH + + +N LINMY+K C + + +VF M+ ++ +SWNSMI +
Sbjct: 397 VHDYMITSGYECDTTASNILINMYAK-CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNG 455
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+A++LF MK + + PD T+ ++L L +H +
Sbjct: 456 SFDEAMKLFKMMKTD--------------VKPDSVTYVMLLSMSTQLGDLXLGKELHCDL 501
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
AK GF + V++N L+ YA+CG + S +VF+ M D+++WN+I+ + L
Sbjct: 502 AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGL 561
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
++ S M V PD AT +S+L CS ++G ++ H + G+ + ++++
Sbjct: 562 RMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI-HGCIFKLGLESDVPVGNVLIEM 620
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ G + + ++ + M + D V W+ L+ +C +GE + A
Sbjct: 621 YSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGEGKKA 661
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 186/384 (48%), Gaps = 27/384 (7%)
Query: 51 MYAKFGYLDDARHLFDEM----PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-P 105
+ AK+ + D F P NV W ++I +G E L+ + P
Sbjct: 113 LIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQP 172
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ ++ SV+ +C D+ K +H L + +Y+ NALI+MY + + D+A KVF
Sbjct: 173 DTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVF 232
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E M R+V+SWNS+I+ + A +A+E++ + FR L G+ PD T S
Sbjct: 233 EEMPLRDVVSWNSLISGYNANGYWNEALEIY----------YRFRNL---GVVPDSYTMS 279
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
VL+AC GL + +H LI K G + D ++ N L+ Y + + +++FDKM
Sbjct: 280 SVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR 339
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
D VSWN+++ Y+ G +E+++LF M +PD T S+L AC H G ++ G K H
Sbjct: 340 DAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFG-KYVH 398
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+ G ++++ + G +L ++++ M + DSV W+ ++ ++G
Sbjct: 399 DYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMINVYIQNGSF 457
Query: 399 RLAELAATKLKQLEPGDSLGFVQM 422
A +K DS+ +V +
Sbjct: 458 DEAMKLFKMMKTDVKPDSVTYVML 481
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS + +A A T +HSLI G + + LI YA + S VF +
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 279 -YHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQ-EG 333
+++ WNSI++A +G EAL L+S + +QPD+ TF S+++AC AGL+ E
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEM 192
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K H + G L ++D+ R + +A K+ EMP+ D V W+ L+
Sbjct: 193 AKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLISGYN 251
Query: 394 KHG 396
+G
Sbjct: 252 ANG 254
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 33/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +LF +C G + + QLH H F + D ++ N L+NMY+ G L AR +FD
Sbjct: 143 FPSLFKSC---GVLCEGKQLHCHSTKLGFAS---DAYIQNTLMNMYSNCGCLVSARKVFD 196
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLH 121
+M ++VVSW +I YAQ E +LF + + PNE +L +VL +C D
Sbjct: 197 KMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLET 256
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
K VH + + H + +AL+++Y K C A +F M +N+ WN MI
Sbjct: 257 AKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGH-- 314
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + EEAL LF ++Q G+ D T + +L AC L +H
Sbjct: 315 -----------VEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHV 363
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I K E D + AL+ YA+CGSI + +VF +M D+++W +++ A+ GQ +
Sbjct: 364 YIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLK 423
Query: 301 ALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M V+PD+ TFV +L+ACSHAGLV EG F+SM +G+ P ++HY CMV
Sbjct: 424 ALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMV 483
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR GRI EAE LI+ MPM PD + LL +CR HG +AE AA +L +L+P +
Sbjct: 484 DMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGG 543
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SNIY ++ A+ +R+ M ++K PG S IE+ VHEF G HPQ
Sbjct: 544 TYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSE 603
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++ L++++ +LK GYVP+ S L D++E+ KE +L HSEKLA+ F +++
Sbjct: 604 IYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLST----TPG 659
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+R+C DCH+ MK S++ +EI+VRD NRFHHF CSC D+W
Sbjct: 660 TPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 26/274 (9%)
Query: 123 KLVHALALKFSLDAHVYVANALIN---MYSKSCADEAWKVFENMEFRNVISWNSMIAAFR 179
K +HA L+ L + A+ ++ ++ A VF + + NS+I +
Sbjct: 57 KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQR-EGMAPDWCTFSIVLKACAGLVTERHASAV 238
L QAI LF QL +G+ PD TF + K+C G++ E
Sbjct: 117 NKNLPRQAI--------------LFYQLMMLQGLDPDRFTFPSLFKSC-GVLCEGKQLHC 161
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
HS K GF D I N L++ Y+ CG + +++VFDKM +VSW +++ AYA
Sbjct: 162 HS--TKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLP 219
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
EA++LF M +V+P+ T V++L+AC+ + ++ +V H ++ G+ +
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQV-HKYIDETGIGFHTVLTSA 278
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ + G A L +MP E + W++++
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMP-EKNLFCWNIMI 311
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
HA + + + F ++A +H GS+ ++ VF+++ + NSI++ Y
Sbjct: 60 HAQMLRTCLFVDPFSASKIVAFCALH---DSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116
Query: 294 LHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
++A+ + M +Q PD TF SL +C G++ EG K H G
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEG-KQLHCHSTKLGFASDA 172
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
++++ G ++ A K+ +M + V W+ ++G+
Sbjct: 173 YIQNTLMNMYSNCGCLVSARKVFDKM-VNKSVVSWATMIGA 212
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/586 (38%), Positives = 345/586 (58%), Gaps = 38/586 (6%)
Query: 21 IKQAMQLHEH--MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
I Q ++H + + PN + V +I+MY K G LDDAR F+E+ +N V+W A
Sbjct: 47 IDQGREIHRYARISGLLPN----VVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNA 102
Query: 79 LISGYAQHGNAEECFRLF---CSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALK 131
+++ Y G E LF C + P++FS + + +C D G+ +H + +
Sbjct: 103 MMTNYKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRR 162
Query: 132 FSLDAH--VYVANALINMYSKSCAD--EAWKVFENMEFR-NVISWNSMIAAFRACKLEAQ 186
+ H V V AL+NMYSK C D EA KVF+++ + + WN+MIAA+ Q
Sbjct: 163 EGKELHKDVVVGTALLNMYSK-CGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQ 221
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
A++L+ M + + +AP TF V+ CA L + A+H+ +
Sbjct: 222 ALDLYRSMHDTTD------------LAPKQGTFVTVIDVCAELSALKQGRAIHARVRATN 269
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
F+ + +++NAL+H Y +CG + + VF M D +SWN+I+ +YA HG + +AL L+
Sbjct: 270 FDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQ 329
Query: 307 NMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M++Q P TFV LLSACSH GLV +G F+ M ++H + P + H+ C++DLLGR
Sbjct: 330 EMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRG 389
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
GR+ EAE +++ MP++ ++V W LLG+C+ HG+ + AA ++ P S G+V +S
Sbjct: 390 GRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLS 449
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
NIY +G + IRK M V+K PG SWIEI + VHEF SG + HPQ E I+ +L
Sbjct: 450 NIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELG 509
Query: 484 ELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIM 543
+++ ++KG+GYVP+TS HD+EEE KE+ L HSEKLA+V+ M + +S++RI+
Sbjct: 510 KMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNM----VVPGKSMLRIV 565
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+R+C+DCH K S + G++IVVRD+ RFH F++ CSC DYW
Sbjct: 566 KNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 611
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER--HASAVHSLIAKYGFEDDTVIANA 256
EAL FR++ + G PD TFS++L A A + +H G + V+ A
Sbjct: 12 EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTA 71
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQ 311
+I Y +CG + ++ F+++ + + V+WN+++ Y L G+ +EAL+LF M + +
Sbjct: 72 VISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSAR 131
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEA 369
PD +F + ACS+ +++G ++ H ML G D ++++ + G + EA
Sbjct: 132 PDKFSFSIAIEACSNLEDLEQGREI-HEMLRREGKELHKDVVVGTALLNMYSKCGDLEEA 190
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
K+ + + DSV W+ ++ + +HG + A
Sbjct: 191 RKVFDSIRHDADSVCWNAMIAAYAQHGRGKQA 222
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/556 (38%), Positives = 327/556 (58%), Gaps = 29/556 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QY 102
V+ L++MY+K G + AR +FD M R VVSW ++I GY Q G+AE +F +L +
Sbjct: 168 VSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEG 227
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEA 156
P ++ L +C D GK VH L + LD+ V V N+LI+MYSK C D A
Sbjct: 228 VQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSK-CKRVDIA 286
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+F+N+ + ++SWN+MI + A+ EAL F ++Q + PD
Sbjct: 287 ADIFKNLRNKTLVSWNAMILGY-------------AQNGCVNEALNAFCEMQSRNIKPDS 333
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T V+ A A L R A +H L+ + + + + AL+ YA+CG+I ++++FD
Sbjct: 334 FTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDM 393
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M +++WN+++ Y HG K +++LF M ++P+ TF+ LSACSH+GLV+EG
Sbjct: 394 MNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEG 453
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
F SM +++G+ P +DHY MVDLLGR GR+ +A I++MP++P ++ +LG+C+
Sbjct: 454 LCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACK 513
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H L E AA ++ +L P D V ++NIY + + K +R M+ S ++K PG
Sbjct: 514 IHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGC 573
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S +EI N VH F SG HPQ + I+ LE L+ +++ GYVP+T+ ++HD+E++ K +
Sbjct: 574 SLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTN-SIHDVEDDVKVQL 632
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F ++N + + I I KN+R+C DCHN K S + G+EI+VRD +
Sbjct: 633 LNTHSEKLAIAFGLLNTST----GTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 688
Query: 574 RFHHFKDRICSCNDYW 589
RFH FKD +CSC DYW
Sbjct: 689 RFHLFKDGVCSCGDYW 704
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 204/419 (48%), Gaps = 28/419 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L C + ++K+ ++H +I + +LF ++NMYAK ++DA ++FD
Sbjct: 33 FTYLLKLCGDNSDLKRGKEIHGSVITS--GFSWNLFAMTGVVNMYAKCRQINDAYNMFDR 90
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
MP+R++V W +ISGYAQ+G A+ L + + P+ ++ S+L + G
Sbjct: 91 MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIG 150
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH L+ ++ V V+ AL++MYSK A +F+ M+ R V+SWNSMI
Sbjct: 151 MAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDG---- 206
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ + + E A+ +F+++ EG+ P T L ACA L VH L
Sbjct: 207 ---------YVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKL 257
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + + D + N+LI Y++C + ++ +F + LVSWN+++ YA +G EA
Sbjct: 258 VDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEA 317
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L F M N++PDS T VS++ A + + ++ K H ++ + + +VD
Sbjct: 318 LNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQA-KWIHGLVIRRFLDKNVFVMTALVD 376
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEPGD 415
+ + G I A KL +M + W+ ++ H G+T + K ++P D
Sbjct: 377 MYAKCGAIHTARKLF-DMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPND 434
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 137/274 (50%), Gaps = 25/274 (9%)
Query: 79 LISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFS 133
++ GYA+ + + F + P ++ +L C D GK +H +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 134 LDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
+++ ++NMY+K C ++A+ +F+ M R+++ WN+MI+ + A F
Sbjct: 61 FSWNLFAMTGVVNMYAK-CRQINDAYNMFDRMPERDLVCWNTMISGY--------AQNGF 111
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
AK+ AL L ++ EG PD T +L A A R AVH + + GFE
Sbjct: 112 AKV-----ALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLV 166
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
++ AL+ Y++CGS+S+++ +FD M + +VSWNS++ Y G A+ A+ +F M
Sbjct: 167 NVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDE 226
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
VQP + T + L AC+ G ++ G K H +++
Sbjct: 227 GVQPTNVTVMGALHACADLGDLERG-KFVHKLVD 259
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/603 (36%), Positives = 343/603 (56%), Gaps = 27/603 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A++ AC+ ++ ++H + + N + ++ FV L++MY R +FD +
Sbjct: 538 ASVLPACSQLERLRIGREIHCYALRN-GDLIENSFVGTALVDMYCNCKQPKKGRLVFDGV 596
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCD----YLHG 122
+R V W AL++GYA++ ++ RLF ++ F PN + ASVL +C +
Sbjct: 597 VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDK 656
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAFRAC 181
+ +H +K YV NAL++MYS+ E K +F M R+++SWN+MI C
Sbjct: 657 EGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVC 716
Query: 182 KLEAQAIELFAKMKNE--EEALFLFRQLQREG---MAPDWCTFSIVLKACAGLVTERHAS 236
A+ L +M+ E+ F + +G P+ T VL CA L
Sbjct: 717 GRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGK 776
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H+ K D + +AL+ YA+CG ++L+ +VFD+M ++++WN ++ AY +HG
Sbjct: 777 EIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHG 836
Query: 297 QAKEALQLFSNMN---------VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
+ +EAL+LF M ++P+ T++++ +ACSH+G+V EG +FH+M +HGV
Sbjct: 837 KGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVE 896
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAAT 406
P+ DHYAC+VDLLGR GR+ EA +LI MP + V WS LLG+CR H E+AA
Sbjct: 897 PRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAK 956
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
L LEP + +V MSNIY +G +++A +RK+MK VRK PG SWIE + VH+F
Sbjct: 957 HLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFL 1016
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
SG HPQ + + + LE L +++ GYVP+ S LH++++E KE L HSE+LA+ F
Sbjct: 1017 SGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFG 1076
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
++N + IR+ KN+R+C DCH K+ S ++ +EI++RD RFHHF + CSC
Sbjct: 1077 LLNTPP----GTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCG 1132
Query: 587 DYW 589
DYW
Sbjct: 1133 DYW 1135
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 190/402 (47%), Gaps = 41/402 (10%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A L A A+H ++ Q+H H+ P + V N L+NMY K G L AR +FD++
Sbjct: 335 AVLKAAAAVH-DLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDI 393
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-----G 122
P R+ VSW ++I+ + E LF +L + P F+L SV +C ++ G
Sbjct: 394 PDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLG 453
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K VHA L+ + D Y NAL+ MY++ ++A +F + ++++SWN++I++
Sbjct: 454 KQVHAYTLR-NGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISS---- 508
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ EEAL + +G+ PD T + VL AC+ L R +H
Sbjct: 509 ---------LSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCY 559
Query: 242 IAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ G +++ + AL+ Y C + VFD + + WN++L YA + +
Sbjct: 560 ALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQ 619
Query: 301 ALQLFSNMNVQ----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL----DH 352
AL+LF M + P++ TF S+L AC KVF HG + + D
Sbjct: 620 ALRLFVEMISESEFCPNATTFASVLPACVRC-------KVFSDKEGIHGYIVKRGFGKDK 672
Query: 353 YA--CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
Y ++D+ R+GR+ E K I + D V W+ ++ C
Sbjct: 673 YVQNALMDMYSRMGRV-EISKTIFGRMNKRDIVSWNTMITGC 713
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 9/179 (5%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGF--EDDTVIANALIHAYARCGSISLSKQVFDK 276
F VLKA A + +H+ + K+G +AN+L++ Y +CG ++ ++QVFD
Sbjct: 333 FPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDD 392
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA-GLVQE 332
+ D VSWNS++ + + +L LF M NV P S T VS+ ACSH G V+
Sbjct: 393 IPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRL 452
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G +V L N + ++ +V + R+GR+ +A+ L + D V W+ ++ S
Sbjct: 453 GKQVHAYTLRNGDLRTYTNN--ALVTMYARLGRVNDAKALFGVFDGK-DLVSWNTVISS 508
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/556 (38%), Positives = 320/556 (57%), Gaps = 26/556 (4%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
V N I Y + G L + +FD M + V SW AL+ GYAQ+ + + L+ +
Sbjct: 343 LVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDS 402
Query: 103 FF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCADEAW 157
P+ F++ S+L++C + +G+ +H AL+ L ++ +L+++Y A
Sbjct: 403 GLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAA 462
Query: 158 KV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+V F+ ME R+++SWN MIA + L +EA+ LFRQ+ +G+ P
Sbjct: 463 QVLFDGMEHRSLVSWNVMIAGYSQNGLP-------------DEAINLFRQMLSDGIQPYE 509
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
V AC+ L R +H K +D +++++I YA+ G I LS+++FD+
Sbjct: 510 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDR 569
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
+ D+ SWN I+ Y +HG+ KEAL+LF M ++PD TF +L ACSHAGLV++G
Sbjct: 570 LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 629
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ F+ ML H + P+L+HY C+VD+LGR GRI +A +LI EMP +PDS IWS LL SCR
Sbjct: 630 LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCR 689
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
HG L E A KL +LEP +V +SN++ SG ++ R +R MK ++K G
Sbjct: 690 IHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGC 749
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWIE+ +VH F G + P+ E + + L ++ +GY P+T LHD+EEE K
Sbjct: 750 SWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGI 809
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F ++N + +R+ KN+RIC DCHN K S ++ ++IVVRD+
Sbjct: 810 LRGHSEKLAISFGLLNTA----KGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNK 865
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF+D ICSC DYW
Sbjct: 866 RFHHFRDGICSCGDYW 881
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 165/314 (52%), Gaps = 22/314 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV N LI MY K G +++A +F+ MP+RN+VSW ++I G++++G +E F F +L
Sbjct: 135 DVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREML 194
Query: 101 ---QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
+ F P+ +L +VL C D G VH LA+K L+ + V N+LI+MYSK
Sbjct: 195 VGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRF 254
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
EA +F+ + +N++SWNSMI + + + L KM+ E+ M
Sbjct: 255 LSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK-----------M 303
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D T VL C + +H ++G + + ++ANA I AY RCG++ S++
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGL 329
VFD M + SWN++L YA + ++AL L+ M + PD T SLL ACS
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423
Query: 330 VQEGNKVFHSMLEN 343
+ G ++ L N
Sbjct: 424 LHYGEEIHGFALRN 437
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 187/405 (46%), Gaps = 26/405 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
L AC +I+ +LHE M++ D + +I MY+ G D+R +FD++
Sbjct: 2 GVLLQACGQRKDIEVGRRLHE-MVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF--FPNEFSLASVLISC----DYLHG 122
++N+ W A++S Y ++ E+ +F L+ P+ F+L V+ +C D G
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+++H +A K L + V+V NALI MY K +EA KVFE+M RN++SWNS+I F
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ F +M EE+ PD T VL CAG AVH L
Sbjct: 181 GFLQESFNAFREMLVGEESF-----------VPDVATLVTVLPVCAGEEDIEKGMAVHGL 229
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G ++ ++ N+LI Y++C +S ++ +FDK ++VSWNS++ YA
Sbjct: 230 AVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRT 289
Query: 302 LQLFSNMNVQ-----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
L M + D T +++L C +Q K H HG+
Sbjct: 290 FYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQS-LKELHGYSWRHGLQSNELVANAF 348
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ R G + +E++ M + S W+ LL ++ + R A
Sbjct: 349 IAAYTRCGALCSSERVFDLMDTKTVSS-WNALLCGYAQNSDPRKA 392
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 168/363 (46%), Gaps = 53/363 (14%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+L AC+ ++ ++H + N D F+ L+++Y G A+ LFD M
Sbjct: 412 GSLLLACSRMKSLHYGEEIHGFALRN--GLAVDPFIGISLLSLYICCGKPFAAQVLFDGM 469
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GK 123
R++VSW +I+GY+Q+G +E LF +L P E ++ V +C L GK
Sbjct: 470 EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGK 529
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H ALK L ++V++++I+MY+K C + ++F+ + ++V SWN +IA +
Sbjct: 530 ELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHG 589
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+A+ELF KM R G+ PD TF+ +L AC+ HA V
Sbjct: 590 RGKEALELFEKM-------------LRLGLKPDDFTFTGILMACS------HAGLV---- 626
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
ED N +++ + + K+ + + ++ G+ +AL
Sbjct: 627 -----EDGLEYFNQMLNLH----------NIEPKLEH-----YTCVVDMLGRAGRIDDAL 666
Query: 303 QLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+L M PDS + SLLS+C G + G KV + +LE P+ +Y + +L
Sbjct: 667 RLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPE--NYVLISNLFAG 724
Query: 363 VGR 365
G+
Sbjct: 725 SGK 727
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 322/563 (57%), Gaps = 31/563 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+ V ++++Y K +D AR +FD M +N V+W+A++ Y E LFC L
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL 313
Query: 100 L----QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK- 150
L + +LA+V+ C D G +H A+K + V N L++MY+K
Sbjct: 314 LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKC 373
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ A + F M+ R+ +S+ ++I+ + + N EE L +F ++Q
Sbjct: 374 GIINGAMRFFNEMDLRDAVSFTAIISGY-------------VQNGNSEEGLRMFLEMQLS 420
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ P+ T + VL ACA L + S H GF DT+I NALI YA+CG I +
Sbjct: 421 GINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTA 480
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
++VFD+M +VSWN+++ AY +HG EAL LF NM ++PD TF+ L+SACSH+
Sbjct: 481 RKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHS 540
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV EG F++M ++ G++P+++HYACMVDLL R G E I +MP+EPD +W
Sbjct: 541 GLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGA 600
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +CR + L E + K+++L P + FV +SN+Y G ++ A +R K
Sbjct: 601 LLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGF 660
Query: 448 RKYPGLSWIEIENRVHEFASGGKR-HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
K PG SWIEI VH F GG R HPQ I KL+EL+ ++K +GY E+S D+E
Sbjct: 661 EKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVE 720
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE KE L +HSEKLA+ F I+ SL ++ +I + KN+R+C DCH +K S + ++
Sbjct: 721 EEEKERVLLYHSEKLAIAFGIL---SLSPDKHII-VTKNLRVCGDCHTAIKFISLVTKRD 776
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I VRD++RFHHFKD IC+C D+W
Sbjct: 777 ITVRDASRFHHFKDGICNCGDFW 799
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 189/367 (51%), Gaps = 22/367 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH-GNAEECFRLFCS 98
+++V+ L++ YAK G LDDA+ +FD+M KR+VV+W ++ISG++ H G+ +E RL
Sbjct: 152 SNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQ 211
Query: 99 LLQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ PN ++ VL + + HGK +H ++ V V ++++Y K C
Sbjct: 212 MQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCI 271
Query: 154 DEAWKVFENMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A ++F+ M +N ++W++M+ A+ C +A+ELF ++ ++ + + +
Sbjct: 272 DYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAV----- 326
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
T + V++ CA L + +H K GF D ++ N L+ YA+CG I+ + +
Sbjct: 327 -----TLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMR 381
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
F++M D VS+ +I+ Y +G ++E L++F M + P+ AT S+L AC+H
Sbjct: 382 FFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAG 441
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ G+ H G ++D+ + G+I A K+ M + V W+ ++
Sbjct: 442 LHYGS-CSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMI 499
Query: 390 GSCRKHG 396
+ HG
Sbjct: 500 IAYGIHG 506
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 41/407 (10%)
Query: 10 TLFHACALHGNIKQAM-QLHEHMINNF--PNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+LF +H ++ + + + HE + NF P E L+++Y L ARH+FD
Sbjct: 24 SLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEK--------LVDLYIACSELKIARHVFD 75
Query: 67 EMPKR--NVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL--- 120
+MP R NVV W LI YA +G EE L+ +L Y PN F+ VL +C L
Sbjct: 76 KMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEA 135
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H + L+++VYV+ AL++ Y+K C D+A +VF+ M R+V++WNSMI+ F
Sbjct: 136 SEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGF 195
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ +E L Q+Q + ++P+ T VL A A + + RH +
Sbjct: 196 S------------LHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEI 242
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQ 297
H + GF D V+ ++ Y +C I ++++FD M + V+W++++ AY +
Sbjct: 243 HGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDF 302
Query: 298 AKEALQLFSNMNVQPD------SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+EAL+LF + + D + T +++ C++ + G H G V L
Sbjct: 303 MREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGT-CLHCYAIKSGFVLDLM 361
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
++ + + G I A + EM + D+V ++ ++ ++G +
Sbjct: 362 VGNTLLSMYAKCGIINGAMRFFNEMDLR-DAVSFTAIISGYVQNGNS 407
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 29/296 (9%)
Query: 110 LASVLISCDYLHGKLVHALALKFSLDAH-VYVAN------ALINMYSKSCADE--AWKVF 160
L S + S GKL+H LK H + N L+++Y +C++ A VF
Sbjct: 16 LESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYI-ACSELKIARHVF 74
Query: 161 ENMEFR--NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+ M R NV+ WN +I A+ A EEA+ L+ ++ G+ P+ T
Sbjct: 75 DKMPHRPKNVVLWNLLIRAY-------------AWNGPYEEAIDLYYKMLGYGITPNRFT 121
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F VLKAC+ L +H I + E + ++ AL+ YA+CG + +K+VFDKM
Sbjct: 122 FPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH 181
Query: 279 YHDLVSWNSILKAYALH-GQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+V+WNS++ ++LH G E +L M +V P+S+T V +L A + ++ G +
Sbjct: 182 KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKE 241
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ H G V + ++D+ G+ I A ++ M + + V WS ++G+
Sbjct: 242 I-HGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/560 (38%), Positives = 342/560 (61%), Gaps = 28/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+LFV ++L +MY+K G L +A +FD+MP+++ V+WTA+I GYA++GN E F +
Sbjct: 153 ELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMR 212
Query: 101 QYFF--PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC-A 153
+ ++ L SVL + L + +H+ +K + V V NAL +MY+K+
Sbjct: 213 REGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADM 272
Query: 154 DEAWKVFE-NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A +V + + NV+S S+I + +E IE +AL +F +L+R+G+
Sbjct: 273 DNAARVVKIDQGSLNVVSATSLIDGY----IETDCIE---------KALLMFIELRRQGV 319
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ TFS ++K CA + +H+ + K D+ +++ L+ Y +CG ISLS Q
Sbjct: 320 EPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQ 379
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGL 329
+F ++ YH ++WN+ + A HG +EA++ F M ++P+ TFVSLL+ACSHAGL
Sbjct: 380 LFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGL 439
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V EG K F+SM ++HG+ P+ +HY+C++D+ GR GR+ EAEK I EMP++P++ W LL
Sbjct: 440 VDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLL 499
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G+CR G L E+AA + +LEP ++ V +S IY G + + +RK M+ +R++K
Sbjct: 500 GACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKK 559
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PG SW++ + H F S HPQ+E I++KLEEL ++K GYVP+T ++E+
Sbjct: 560 LPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTA 619
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K+ L +HSE++A+ FA++ S+ + +I + KN+RIC DCH+ +K S + ++I+V
Sbjct: 620 KQRILRYHSERIAVAFALI---SMPATKPII-VKKNLRICADCHSALKFISKVENRDIIV 675
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD++RFHHF CSC DYW
Sbjct: 676 RDNSRFHHFVKGGCSCGDYW 695
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 200/405 (49%), Gaps = 29/405 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A +C G+++ LH ++ + F+ NHLI MY+ + A LFD M
Sbjct: 21 AAPLQSCGRAGDLRLGRCLHARLVLSGA-AAASTFLANHLITMYSHCADVPSAVRLFDAM 79
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKL--- 124
P+ N+VSWT L+SG Q+ + F S+ + P +F+L+S + L +
Sbjct: 80 PRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGA 139
Query: 125 -VHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H + ++ DA ++VA+ L +MYSKS EA +VF+ M ++ ++W +M
Sbjct: 140 QLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAM-------- 191
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGM-APDWCTFSIVLKACAGLVTERHASAVHSL 241
I+ +AK N E A+ FR ++REG+ D VL A GL A A+HS
Sbjct: 192 -----IDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSC 246
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQV--FDKMTYHDLVSWNSILKAYALHGQAK 299
+ K GFE + + NAL YA+ + + +V D+ + ++VS S++ Y +
Sbjct: 247 VMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSL-NVVSATSLIDGYIETDCIE 305
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL +F + V+P+ TF S++ C+ L+++G ++ H+ + ++ + +
Sbjct: 306 KALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL-HAEVIKTSLISDSFVSSTL 364
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+D+ G+ G I + +L +E+ D + W+ + +HG R A
Sbjct: 365 LDMYGKCGLISLSIQLFKEIEYHTD-IAWNAAINVLAQHGHGREA 408
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 30/282 (10%)
Query: 106 NEFSLASVLISC----DYLHGKLVHA-LALKFSLDAHVYVANALINMYSKSCAD--EAWK 158
LA+ L SC D G+ +HA L L + A ++AN LI MYS CAD A +
Sbjct: 16 TSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSH-CADVPSAVR 74
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F+ M N++SW ++++ + A+ F+ M R G+ P
Sbjct: 75 LFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSM-------------CRAGLVPTQFA 121
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
S +A A L + +H + + GF+ + +A+ L Y++ G + + +VFD+M
Sbjct: 122 LSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMP 181
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEG- 333
D V+W +++ YA +G + A+ F +M V D S+LSA +G +++G
Sbjct: 182 QKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSA---SGGLKDGW 238
Query: 334 -NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
+ HS + G ++ + D+ + + A ++++
Sbjct: 239 LARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVK 280
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ CA+ ++Q QLH +I + D FV++ L++MY K G + + LF E
Sbjct: 326 FSSMIKGCAMQALLEQGAQLHAEVIKT--SLISDSFVSSTLLDMYGKCGLISLSIQLFKE 383
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVH 126
+ ++W A I+ AQHG+ E R F + PN + S+L +C + G +
Sbjct: 384 IEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHA-GLVDE 442
Query: 127 ALALKFSLDAHVYVA------NALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAAF 178
L +S+ H + + +I+MY ++ DEA K M + N W S++ A
Sbjct: 443 GLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGAC 502
Query: 179 R 179
R
Sbjct: 503 R 503
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/599 (36%), Positives = 339/599 (56%), Gaps = 39/599 (6%)
Query: 23 QAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISG 82
+A + +++ P+ +D ++ Y + G + AR +F+E+ + V W A+ISG
Sbjct: 211 EATRDARKVLDEMPD--KDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISG 268
Query: 83 YAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCD----YLHGKLVHA----LALKFS 133
Y G E F LF ++ P +EF+ SVL +C + HGK VH L F
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFV 328
Query: 134 LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
+A + V NAL+ +YSK C + A ++F+NM+ ++V+SWN++++ + +A+E+F
Sbjct: 329 PEAALPVNNALVTLYSK-CGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVF 387
Query: 192 AKM--KNE----------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+M KNE E+AL LF +++ E + P T++ + AC L + +
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLK 447
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
H +H + + GFE NALI YARCG++ + +F M D VSWN+++ A
Sbjct: 448 HGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALG 507
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG +EAL+LF M + PD +F+++L+AC+H+GLV EG + F SM + G++P
Sbjct: 508 QHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGE 567
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
DHY ++DLLGR GRI EA LI+ MP EP IW +L CR G+ L AA +L +
Sbjct: 568 DHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFK 627
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
+ P ++ +SN Y +G + A +RK M+ V+K PG SWIE N+VH F G
Sbjct: 628 MTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDT 687
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+HP+ ++K LE + +++ +GYVP+T + LHD+E KE L+ HSE+LA+ F ++
Sbjct: 688 KHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLK- 746
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + ++KN+RIC DCH M S +G+EIVVRD RFHHFKD CSC +YW
Sbjct: 747 ---LPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 202/461 (43%), Gaps = 80/461 (17%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP- 69
L H L G++ A L F +P + T+ L+ YA G L A FD +P
Sbjct: 65 LIHLYTLSGDLPAAATL-------FRADPCPVAATS-LVAAYAAAGRLPAAVSFFDAVPQ 116
Query: 70 -KRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDYL------ 120
+R+ V A+IS YA+ +A +F SLL P+++S ++L + +L
Sbjct: 117 ARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVR 176
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCADEAW----KVFENMEFRNVISWNSMIA 176
H + LK + V+NAL+ +Y K A EA KV + M ++ ++W +M+
Sbjct: 177 HCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVV 236
Query: 177 AFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCT 218
+ A +F ++ + EA LFR++ E + D T
Sbjct: 237 GYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFT 296
Query: 219 FSIVLKACAGLVTERHASAVHSLIAK----YGFEDDTVIANALIHAYARCGSISLSKQVF 274
F+ VL ACA H +VH I + + E + NAL+ Y++CG+I++++++F
Sbjct: 297 FTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIF 356
Query: 275 DKMTYHDLVSWNSILKAYA------------------------------LHGQ-AKEALQ 303
D M D+VSWN+IL Y +HG +++AL+
Sbjct: 357 DNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALK 416
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF+ M +V+P T+ +SAC G ++ G K H L G ++ +
Sbjct: 417 LFNRMRAEDVKPCDYTYAGAISACGELGSLKHG-KQLHGHLVQLGFEGSNSAGNALITMY 475
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
R G + EA + MP DSV W+ ++ + +HG R A
Sbjct: 476 ARCGAVKEANLMFLVMP-NIDSVSWNAMISALGQHGHGREA 515
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
YA AC G++K QLH H++ F N LI MYA+ G + +A +F
Sbjct: 433 YAGAISACGELGSLKHGKQLHGHLVQLGFEGSNS---AGNALITMYARCGAVKEANLMFL 489
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
MP + VSW A+IS QHG+ E LF ++ + +P+ S +VL +C+ H LV
Sbjct: 490 VMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN--HSGLV 547
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVIS-WNSMIA 176
++ F + LI++ ++ EA + + M F S W ++++
Sbjct: 548 DEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607
Query: 177 AFRAC---KLEAQAIELFAKMKNEEEALFLF 204
R +L A A + KM + + ++
Sbjct: 608 GCRTSGDMELGAHAADQLFKMTPQHDGTYIL 638
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 335/599 (55%), Gaps = 30/599 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ + + L ++C ++ + +H ++ + + QD ++ LINMY G +D A
Sbjct: 73 TKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLD--QDPYLATKLINMYCDLGSVDHACK 130
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----- 117
+FDE ++ + W A+ A E+ L+ + P N F+ VL +C
Sbjct: 131 VFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSEL 190
Query: 118 ---DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
GK +HA L+ + HV+V L+++Y++ A VF M +N++SW++
Sbjct: 191 SICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSA 250
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MIA + ++ +A+ELF M L+ P+ T VL+ACA L
Sbjct: 251 MIACYAKNEMPMKALELFQIM-----------MLEACDTVPNPITMVSVLQACASLAALE 299
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
H VH+ + + G + + N LI Y RCG IS ++VFD M D++SWNS++ Y
Sbjct: 300 HGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYG 359
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+HG K+A+Q+F NM V P TF+++L ACSHAGLV+E +F SML + + P++
Sbjct: 360 MHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRM 419
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HYACMVD+LGR R+ EA +LI+ M +P +W LLGSCR H LAE A+ L +
Sbjct: 420 EHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFE 479
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP ++ +V +S+IY S +N R +RK+++ ++K P SWIE++ +++ S +
Sbjct: 480 LEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEE 539
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+PQ E + L L+ ++K GYVP+T++ +D++EE KE + HS KLA+ F ++N
Sbjct: 540 YNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINT 599
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +IRI N+R+C DCH FMK S +EI++RD NRFH FKD +CSC DYW
Sbjct: 600 S----KGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/595 (37%), Positives = 342/595 (57%), Gaps = 38/595 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGY---LDDARHLF 65
+++ ACA G+ QLH ++ D V+ L++MY K ++ AR +F
Sbjct: 253 SSMVSACAEQGSAGLGQQLHSLVLR--LGLVSDTCVSCGLVDMYTKLQMEQSMECARKVF 310
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEE-CFRLFCSLL-QYFFPNEFSLASVLISC----DY 119
MP NV+SWTALISGY Q G E L C +L + PN + +S+L +C D
Sbjct: 311 KRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQ 370
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +HA +K S+ V NAL++MY++S C +EA K F+ + RN++S +S I
Sbjct: 371 DSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG-- 428
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ Q++ + TF+ +L A A + +
Sbjct: 429 ----------------ETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQL 472
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQ 297
H+L K GFE D I+N+L+ Y+RCG + + + FD+M H+++SW SI+ A A HG
Sbjct: 473 HALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGH 532
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A+ AL LF +M V+P+ T++++LSACSH GLV+EG + F SM ++H ++P+++HYA
Sbjct: 533 AERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYA 592
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLL R G + EA + I EMP + D+++W LLG+CR + + E+AA + LEP
Sbjct: 593 CMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQ 652
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D +V +SN+Y G +++ IR M+ + K GLSW+ + N +HEF +G HP+
Sbjct: 653 DPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPR 712
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I+ KL LI ++K +GYVP+TS+ LHD+ ++ KE+ L HSEK+A+ F ++
Sbjct: 713 AQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITT---- 768
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+C DCH+ +K S G+EI++RDSNRFH KD CSC +YW
Sbjct: 769 LPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 196/387 (50%), Gaps = 28/387 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V LI+M+A+ G L AR +F+ + +R VV WT +I+ Y Q G A + LF +L
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241
Query: 101 QYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
+ F P+ ++++S++ +C G+ +H+L L+ L + V+ L++MY+K ++
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 156 ----AWKVFENMEFRNVISWNSMIAAFRACK-LEAQAIELFAKMKNEEEALFLFRQLQRE 210
A KVF+ M NV+SW ++I+ + C E A+EL +M NE
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNES------------ 349
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ P+ T+S +LKACA L + +H+ + K + V+ NAL+ YA G + +
Sbjct: 350 -IEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEA 408
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLV 330
++ FD++ +L+S +S + A + Q+ S M+V + TF SLLSA + GL
Sbjct: 409 RKAFDQLYERNLLSTSSDIGETG-RSNASWSSQIES-MDVGVSTFTFASLLSAAATVGLP 466
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+G + H++ G +V + R G + +A + EM + + + W+ ++
Sbjct: 467 TKGQQ-LHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIIS 525
Query: 391 SCRKHG--ETRLAELAATKLKQLEPGD 415
+ KHG E L+ L ++P D
Sbjct: 526 ALAKHGHAERALSLFHDMILSGVKPND 552
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 31/313 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSL 99
D V N L+ MY+K G++ AR +FD M R++VSWTA+ ++G +E L +
Sbjct: 78 DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137
Query: 100 LQYFF-PNEFSLASVLISC-----DYLHGKLVHALALKFSL-DAHVYVANALINMYSKSC 152
L+ PN F+L + +C G V A+K V V ALI+M++++
Sbjct: 138 LESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARN- 196
Query: 153 AD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D A KVF + R V+ W MI + +A+ELF M +
Sbjct: 197 GDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM-------------LED 243
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC---GSI 267
G PD T S ++ ACA + +HSL+ + G DT ++ L+ Y + S+
Sbjct: 244 GFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSM 303
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYA-LHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+++VF +M H+++SW +++ Y GQ A++L M +++P+ T+ SLL A
Sbjct: 304 ECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKA 363
Query: 324 CSHAGLVQEGNKV 336
C++ G ++
Sbjct: 364 CANLSDQDSGRQI 376
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 169/345 (48%), Gaps = 41/345 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y++L ACA + Q+H ++ V N L++MYA+ G +++AR FD+
Sbjct: 357 YSSLLKACANLSDQDSGRQIHARVMKTSIGNVN--VVGNALVSMYAESGCMEEARKAFDQ 414
Query: 68 MPKRNVVSWTALI--SGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLV 125
+ +RN++S ++ I +G + + + + + + F + S A+ + G+ +
Sbjct: 415 LYERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGL--PTKGQQL 472
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEF-RNVISWNSMIAAFRACK 182
HAL++K ++ ++N+L++MYS+ C D+A + F+ ME NVISW S+I+A
Sbjct: 473 HALSIKTGFESDKGISNSLVSMYSR-CGYLDDACRAFDEMEDDHNVISWTSIISA----- 526
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE-----RHA 235
AK + E AL LF + G+ P+ T+ VL AC+ GLV E R
Sbjct: 527 --------LAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSM 578
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYAL 294
H LI + E + + L AR G + + + ++M D + W ++L A
Sbjct: 579 QKDHRLIPR--MEHYACMVDLL----ARSGLVQEALEFINEMPCKADALVWKTLLGACRT 632
Query: 295 HGQAKEALQLFSN--MNVQP-DSATFVSLLSACSHAGLVQEGNKV 336
+ + E ++ + ++++P D A +V L + +H GL E ++
Sbjct: 633 Y-ENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARI 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
ST +A+L A A G + QLH I D ++N L++MY++ GYLDDA
Sbjct: 449 STFTFASLLSAAATVGLPTKGQQLHALSIKT--GFESDKGISNSLVSMYSRCGYLDDACR 506
Query: 64 LFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL 120
FDEM NV+SWT++IS A+HG+AE LF + L PN+ + +VL +C ++
Sbjct: 507 AFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHV 565
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAK 299
L+ + D ++AN+L+ Y++CG + +++VFD M DLVSW ++ +G +
Sbjct: 69 LLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQ 128
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ-EGNKVFHSMLENHGVVPQLDHYAC 355
EAL L M ++P++ T + AC L + G V ++ +
Sbjct: 129 EALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCA 188
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ R G ++ A K+ + +E V+W++++
Sbjct: 189 LIDMFARNGDLVAARKVFNGL-VERTVVVWTLMI 221
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/592 (39%), Positives = 334/592 (56%), Gaps = 32/592 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC+ G Q+H MI N D ++ L++MYAK +LDDAR +FD M
Sbjct: 307 SSILKACSGAGAFDLGRQIHGFMIK--ANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM 364
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG----K 123
R+++ ALISG + G +E LF L + N +LA+VL S L +
Sbjct: 365 FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR 424
Query: 124 LVHALALK--FSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
VHALA+K F DAHV N LI+ Y K SC +A +VFE ++I+ SMI A
Sbjct: 425 QVHALAVKIGFIFDAHV--VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQ 482
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
C + E A+ LF ++ R+G+ PD S +L ACA L VH+
Sbjct: 483 CD-------------HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 529
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K F D NAL++ YA+CGSI ++ F + +VSW++++ A HG K
Sbjct: 530 HLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKR 589
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M + P+ T S+L AC+HAGLV E + F+SM E G+ +HY+CM+
Sbjct: 590 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMI 649
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G++ +A +L+ MP + ++ IW LLG+ R H + L +LAA KL LEP S
Sbjct: 650 DLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSG 709
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V ++N Y +G +N+ +RK MK S ++K P +SWIE++++VH F G K HP +
Sbjct: 710 THVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKE 769
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+ KL EL + G+VP + LHD++ KE L HHSE+LA+ FA+++
Sbjct: 770 IYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLST----PPG 825
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+RIC DCH K S ++ +EI++RD NRFHHF+D CSC DYW
Sbjct: 826 APIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 227/449 (50%), Gaps = 33/449 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ + +AC NI+ Q+H ++ +D+F N L++MY K G +D A +F++
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRM--GYDKDVFTANALVDMYMKMGRVDIASVIFEK 262
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLHG 122
MP +VVSW ALISG +G+ L + PN F+L+S+L +C + G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K + D+ Y+ L++MY+K+ D+A KVF+ M R++I N++I+ C
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS---GC 379
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ +EAL LF +L++EG+ + T + VLK+ A L VH+L
Sbjct: 380 SHGGR----------HDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL 429
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K GF D + N LI +Y +C +S + +VF++ + D+++ S++ A + + A
Sbjct: 430 AVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGA 489
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M ++PD SLL+AC+ ++G +V +++ + A +V
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA-LVY 548
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSL 417
+ G I +AE +P E V WS ++G +HG + A EL + ++ G +
Sbjct: 549 TYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFG---RMVDEGINP 604
Query: 418 GFVQMSNIYCL---SGSFNKARLIRKEMK 443
+ M+++ C +G ++A+ MK
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMK 633
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 32/363 (8%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFF 104
NHLI+ Y+K AR FDE+P VSW++L++ Y+ +G + F + +
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 105 PNEFSLASVLISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
NEF+L V++ C D G VHA+A+ + V+VANAL+ MY D+A +VF
Sbjct: 101 CNEFAL-PVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 162 NMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCT 218
+ RN +SWN +++A+ +KN++ +A+ +F ++ G+ P
Sbjct: 160 EADSERNAVSWNGLMSAY---------------VKNDQCGDAIQVFGEMVWSGIQPTEFG 204
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS V+ AC G VH+++ + G++ D ANAL+ Y + G + ++ +F+KM
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSWN+++ L+G A++L M + P+ T S+L ACS AG G +
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQ 324
Query: 336 VFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ M++ + D Y +VD+ + + +A K+ M D ++ + L+ C
Sbjct: 325 IHGFMIKANA---DSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGCS 380
Query: 394 KHG 396
G
Sbjct: 381 HGG 383
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 142/273 (52%), Gaps = 20/273 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N L+ MY FG++DDAR +F+E +RN VSW L+S Y ++ + ++F
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 99 LL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
++ P EF + V+ +C + G+ VHA+ ++ D V+ ANAL++MY K
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGR 252
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A +FE M +V+SWN++I+ C L + A+ L Q++ G+
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISG---CVLNGH----------DHRAIELLLQMKYSGL 299
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ T S +LKAC+G +H + K + D I L+ YA+ + +++
Sbjct: 300 VPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARK 359
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
VFD M + DL+ N+++ + G+ EAL LF
Sbjct: 360 VFDWMFHRDLILCNALISGCSHGGRHDEALSLF 392
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++L +ACA +Q Q+H H+I D F N L+ YAK G ++DA F
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKR--QFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
+P+R VVSW+A+I G AQHG+ + LF ++ + PN ++ SVL +C+ H LV
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN--HAGLV 622
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIA 176
+++ F +D + +I++ ++ D+A ++ +M F+ N W +++
Sbjct: 623 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682
Query: 177 AFRACK 182
A R K
Sbjct: 683 ASRVHK 688
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/592 (39%), Positives = 334/592 (56%), Gaps = 32/592 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC+ G Q+H MI N D ++ L++MYAK +LDDAR +FD M
Sbjct: 307 SSILKACSGAGAFDLGRQIHGFMIK--ANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM 364
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG----K 123
R+++ ALISG + G +E LF L + N +LA+VL S L +
Sbjct: 365 FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR 424
Query: 124 LVHALALK--FSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
VHALA+K F DAHV N LI+ Y K SC +A +VFE ++I+ SMI A
Sbjct: 425 QVHALAVKIGFIFDAHV--VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQ 482
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
C + E A+ LF ++ R+G+ PD S +L ACA L VH+
Sbjct: 483 CD-------------HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 529
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K F D NAL++ YA+CGSI ++ F + +VSW++++ A HG K
Sbjct: 530 HLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKR 589
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF M + P+ T S+L AC+HAGLV E + F+SM E G+ +HY+CM+
Sbjct: 590 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMI 649
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G++ +A +L+ MP + ++ IW LLG+ R H + L +LAA KL LEP S
Sbjct: 650 DLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSG 709
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V ++N Y +G +N+ +RK MK S ++K P +SWIE++++VH F G K HP +
Sbjct: 710 THVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKE 769
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+ KL EL + G+VP + LHD++ KE L HHSE+LA+ FA+++
Sbjct: 770 IYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLST----PPG 825
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+RIC DCH K S ++ +EI++RD NRFHHF+D CSC DYW
Sbjct: 826 APIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 227/449 (50%), Gaps = 33/449 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ + +AC NI+ Q+H ++ +D+F N L++MY K G +D A +F++
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRM--GYDKDVFTANALVDMYMKMGRVDIASVIFEK 262
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLHG 122
MP +VVSW ALISG +G+ L + PN F+L+S+L +C + G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K + D+ Y+ L++MY+K+ D+A KVF+ M R++I N++I+ C
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS---GC 379
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ +EAL LF +L++EG+ + T + VLK+ A L VH+L
Sbjct: 380 SHGGR----------HDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL 429
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K GF D + N LI +Y +C +S + +VF++ + D+++ S++ A + + A
Sbjct: 430 AVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGA 489
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M ++PD SLL+AC+ ++G +V +++ + A +V
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA-LVY 548
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSL 417
+ G I +AE +P E V WS ++G +HG + A EL + ++ G +
Sbjct: 549 TYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFG---RMVDEGINP 604
Query: 418 GFVQMSNIYCL---SGSFNKARLIRKEMK 443
+ M+++ C +G ++A+ MK
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMK 633
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 183/363 (50%), Gaps = 32/363 (8%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFF 104
NHLI+ Y+K AR +FDE+P VSW++L++ Y+ +G + F + +
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 105 PNEFSLASVLISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
NEF+L V++ C D G VHA+A+ + V+VANAL+ MY D+A +VF
Sbjct: 101 CNEFAL-PVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 162 NMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCT 218
+ RN +SWN +++A+ +KN++ +A+ +F ++ G+ P
Sbjct: 160 EADSERNAVSWNGLMSAY---------------VKNDQCGDAIQVFGEMVWSGIQPTEFG 204
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS V+ AC G VH+++ + G++ D ANAL+ Y + G + ++ +F+KM
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSWN+++ L+G A++L M + P+ T S+L ACS AG G +
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQ 324
Query: 336 VFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ M++ + D Y +VD+ + + +A K+ M D ++ + L+ C
Sbjct: 325 IHGFMIKANA---DSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGCS 380
Query: 394 KHG 396
G
Sbjct: 381 HGG 383
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 142/273 (52%), Gaps = 20/273 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N L+ MY FG++DDAR +F+E +RN VSW L+S Y ++ + ++F
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 99 LL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
++ P EF + V+ +C + G+ VHA+ ++ D V+ ANAL++MY K
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGR 252
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A +FE M +V+SWN++I+ C L + A+ L Q++ G+
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISG---CVLNGH----------DHRAIELLLQMKYSGL 299
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ T S +LKAC+G +H + K + D I L+ YA+ + +++
Sbjct: 300 VPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARK 359
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
VFD M + DL+ N+++ + G+ EAL LF
Sbjct: 360 VFDWMFHRDLILCNALISGCSHGGRHDEALSLF 392
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++L +ACA +Q Q+H H+I D F N L+ YAK G ++DA F
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKR--QFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
+P+R VVSW+A+I G AQHG+ + LF ++ + PN ++ SVL +C+ H LV
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN--HAGLV 622
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIA 176
+++ F +D + +I++ ++ D+A ++ +M F+ N W +++
Sbjct: 623 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682
Query: 177 AFRACK 182
A R K
Sbjct: 683 ASRVHK 688
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 330/565 (58%), Gaps = 35/565 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D++V N +++MY KFG ++ AR +FD M R++ SW ++SG+ ++G A F +F +
Sbjct: 157 EDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDM 216
Query: 100 LQ-YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHV---YVANALINMY--- 148
+ F + +L ++L +C D GK +H ++ V ++ N++I+MY
Sbjct: 217 RRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNC 276
Query: 149 -SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
S SCA K+FE + ++V+SWNS+I+ + C QA+ELF +M
Sbjct: 277 ESVSCAR---KLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRM------------- 320
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
G PD T VL AC + R + V S + K G+ + V+ ALI YA CGS+
Sbjct: 321 VVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSL 380
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ +VFD+M +L + ++ + +HG+ +EA+ +F M V PD F ++LSAC
Sbjct: 381 VCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSAC 440
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH+GLV EG ++F+ M ++ V P+ HY+C+VDLLGR G + EA +I M ++P+ +
Sbjct: 441 SHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDV 500
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W+ LL +CR H +LA ++A KL +L P G+V +SNIY + +R +
Sbjct: 501 WTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAK 560
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
R+RK P S++E+ VH+F G H Q + I+ KL++L QLK GY P+TSL L+D
Sbjct: 561 RRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYD 620
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
+EEE KE+ L+ HSE+LAL FA++N G + IRI KN+R+C DCH +K+ S L
Sbjct: 621 VEEEIKEKMLWDHSERLALAFALINTGP----GTTIRITKNLRVCGDCHTVIKMISKLTN 676
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI++RD RFHHF+D +CSC YW
Sbjct: 677 REIIMRDICRFHHFRDGLCSCGGYW 701
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 197/405 (48%), Gaps = 28/405 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
TL + ++ QA+QLH H + ++ ++ L YA G++ A+H+FD++
Sbjct: 26 GTLLQSLTNSKSLTQALQLHAH-VTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQI 84
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYL----HGK 123
+N W ++I GYA + + L+ +L + P+ F+ VL +C L G+
Sbjct: 85 VLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGR 144
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAFRACK 182
VHAL + L+ VYV N++++MY K EA + VF+ M R++ SWN+M++ F
Sbjct: 145 KVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNG 204
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A E+F M+ R+G D T +L AC ++ + +H +
Sbjct: 205 EARGAFEVFGDMR-------------RDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYV 251
Query: 243 AKYGFED---DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ G + + N++I Y C S+S ++++F+ + D+VSWNS++ Y G A
Sbjct: 252 VRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAF 311
Query: 300 EALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL+LF M V PD T +S+L+AC+ ++ G V S + G V + +
Sbjct: 312 QALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATV-QSYVVKRGYVVNVVVGTAL 370
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + G ++ A ++ EMP E + +V++ HG R A
Sbjct: 371 IGMYANCGSLVCACRVFDEMP-EKNLPACTVMVTGFGIHGRGREA 414
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I+ + AC+ G + + ++ M ++ EP+ + L+++ + GYLD+A + +
Sbjct: 432 IFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYS-CLVDLLGRAGYLDEAYAVIE 490
Query: 67 EMP-KRNVVSWTALISGYAQHGNAE 90
M K N WTAL+S H N +
Sbjct: 491 NMKLKPNEDVWTALLSACRLHRNVK 515
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/588 (36%), Positives = 326/588 (55%), Gaps = 21/588 (3%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++F AC+ +++ + H + D+ V L+N YA+ G +D AR F
Sbjct: 233 FVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAA 292
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVH 126
MP+RN VSWT++I+ +AQ G+ LL+ P +L + L C+ LH +LV
Sbjct: 293 MPERNAVSWTSMIAAFAQIGHLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVE 352
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A+A + + V + L+ Y++ E A +VF R W++ L
Sbjct: 353 AIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDA--------ALVT 401
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA-K 244
I ++A+ ++ L+ G++PD + L ACA L +H+ +A
Sbjct: 402 AMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAAD 461
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
+ D + NA++ Y +CGS+ ++ FD M D +SWN++L A A HG+ ++ L
Sbjct: 462 RRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDL 521
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M + F++LLSAC+HAGLV+ G + F +M +HGVVP +HY CMVDLLG
Sbjct: 522 FRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLG 581
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R GR+ +A +++ MP+ PD+ W L+G+CR +G+T AA ++ +L + +V
Sbjct: 582 RKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVA 641
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+ NIY +G + A +RK M +RK PG+S IEI ++VHEF + HPQ EAI+ +
Sbjct: 642 LCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAE 701
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
LE ++G ++ GY T LHD+EEE KE+ L HSEKLA+ F +M+ + S +R
Sbjct: 702 LERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMST----PQGSTLR 757
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++KN+R+CVDCHN K S + G+EIVVRD RFHHFKD CSC DYW
Sbjct: 758 VIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 153/298 (51%), Gaps = 28/298 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D ++ + L+ MY + G L+ A +F ++ +++V WT LIS Y G++ LF +
Sbjct: 60 RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119
Query: 100 LQYFFP-NEFSLASVLISC---DYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
LQ + SVL +C ++L G+L+H A++ L VA+AL++MY + C
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGR-CGS 178
Query: 155 --EAWKVFENMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+A +F ++E +V+ WN+MI A ++ + EAL +F ++ + G
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMITA-------------NSQNGSPREALEIFYRMLQLG 225
Query: 212 MAPDWCTFSIVLKACAGLVTER--HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ PD TF V KAC+ + R H+ + + G D V+A AL++AYARCG I
Sbjct: 226 IPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDC 285
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+++ F M + VSW S++ A+A G A++ F M V P +T + L C
Sbjct: 286 AREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 129/259 (49%), Gaps = 20/259 (7%)
Query: 139 YVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
Y+A++L+ MY + + + A VF + ++++ W +I+A+ +
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAY-------------VSRGHS 109
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
A+ LF ++ +EG+A D F VL AC+ +H + G ++A+AL
Sbjct: 110 AAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASAL 169
Query: 258 IHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
+ Y RCGS+ + +F + H D+V WN+++ A + +G +EAL++F M + PD
Sbjct: 170 VSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPD 229
Query: 314 SATFVSLLSACSHAGLVQEGN-KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
TFVS+ ACS + ++ K FH+ L+ G+ + +V+ R G I A +
Sbjct: 230 LVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREF 289
Query: 373 IREMPMEPDSVIWSVLLGS 391
MP E ++V W+ ++ +
Sbjct: 290 FAAMP-ERNAVSWTSMIAA 307
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
D +A++L++ Y RCGS+ + VF K+ + +V W ++ AY G + A+ LF +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ D+ FVS+LSACS + G ++ H G+ Q + +V + GR G +
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAG-RLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFVQM 422
+A L + D V+W+ ++ + ++G R A ++ QL P D + FV +
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSV 236
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/600 (38%), Positives = 355/600 (59%), Gaps = 41/600 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHLF 65
+++F ACA N+ QLH I + + V L++MYAK G +DD R +F
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDD----VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 66 DEMPKRNVVSWTALISGYAQHGN-AEECFRLFCSLLQ--YFFPNEFSLASVLISCDYLH- 121
D M +V+SWTALI+GY ++ N A E LF ++ + PN F+ +S +C L
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMI-A 176
GK V A K L ++ VAN++I+M+ KS ++A + FE++ +N++S+N+ +
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
R E QA +L +++ E + F TF+ +L A + + R
Sbjct: 449 TCRNLNFE-QAFKLLSEITERELGVSAF-------------TFASLLSGVANVGSIRKGE 494
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+HS + K G + + NALI Y++CGSI + +VF+ M +++SW S++ +A HG
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
A L+ F+ M V+P+ T+V++LSACSH GLV EG + F+SM E+H + P+++HY
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
ACMVDLL R G + +A + I MP + D ++W LG+CR H T L +LAA K+ +L+P
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDP 674
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+ ++Q+SNIY +G + ++ +R++MK + K G SWIE+ +++H+F G HP
Sbjct: 675 NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHP 734
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ----LYHHSEKLALVFAIMN 529
I+ +L+ LI ++K GYVP+T L LH +EEE+ E + LY HSEK+A+ F ++
Sbjct: 735 NAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLI- 793
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + R V R+ KN+R+C DCHN MK S + G+EIV+RD NRFHHFKD CSCNDYW
Sbjct: 794 --STSKSRPV-RVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 186/372 (50%), Gaps = 32/372 (8%)
Query: 40 QDLFVTNHLINMYAKF-GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+ V LI+M+ K ++A +FD+M + NVV+WT +I+ Q G E R F
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 99 L-LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ L F ++F+L+SV +C L GK +H+ A++ L V +L++MY+K A
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSA 317
Query: 154 ----DEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
D+ KVF+ ME +V+SW ++I + + C L +AI LF++M +
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM------------IT 365
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ + P+ TFS KAC L R V K G ++ +AN++I + + +
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACS 325
+++ F+ ++ +LVS+N+ L + ++A +L S + + + TF SLLS +
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI- 384
+ G +++G ++ HS + G+ ++ + + G I A ++ ME +VI
Sbjct: 486 NVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN--FMENRNVIS 542
Query: 385 WSVLLGSCRKHG 396
W+ ++ KHG
Sbjct: 543 WTSMITGFAKHG 554
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 195/406 (48%), Gaps = 39/406 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++L +C + + +H +I F EP D + N LI++Y+K G A +F+
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIE-FDIEP-DSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 68 M---PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC---DYL 120
M KR+VVSW+A+++ Y +G + ++F L+ PN++ +V+ +C D++
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 121 H-GKLVHALALKFS-LDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIA 176
G++ +K ++ V V +LI+M+ K + + A+KVF+ M NV++W MI
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
C +M EA+ F + G D T S V ACA L
Sbjct: 243 ---RC----------MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARC---GSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+HS + G DD + +L+ YA+C GS+ ++VFD+M H ++SW +++ Y
Sbjct: 290 QLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 294 LHGQ-AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ A EA+ LFS M +V+P+ TF S AC + + G +V + G+
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK-RGLAS 406
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-GSCR 393
++ + + R+ +A++ + E + V ++ L G+CR
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 37/302 (12%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVF 160
+ + +S+L SC D+ GKLVHA ++F ++ + N+LI++YSKS + +A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 161 ENMEF---RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP-DW 216
E M R+V+SW++M+A + E AI++F + F +L G+ P D+
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE----------FLEL---GLVPNDY 167
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYG-FEDDTVIANALIHAYARC-GSISLSKQVF 274
C ++ V++AC+ + K G FE D + +LI + + S + +VF
Sbjct: 168 C-YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVF 226
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
DKM+ ++V+W ++ G +EA++ F +M + D T S+ SAC+ +
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS 286
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRV---GRILEAEKLIREMPMEPDSVI-WSV 387
G K HS G+V ++ +VD+ + G + + K+ ME SV+ W+
Sbjct: 287 LG-KQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDR--MEDHSVMSWTA 341
Query: 388 LL 389
L+
Sbjct: 342 LI 343
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 101/202 (50%), Gaps = 7/202 (3%)
Query: 207 LQREGMAP-DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ R+G+ P D TFS +LK+C R VH+ + ++ E D+V+ N+LI Y++ G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 266 SISLSKQVFDKMTY---HDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVS 319
+ ++ VF+ M D+VSW++++ Y +G+ +A+++F + + P+ + +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
++ ACS++ V G +++ + ++D+ + E + + E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 380 PDSVIWSVLLGSCRKHGETRLA 401
+ V W++++ C + G R A
Sbjct: 232 LNVVTWTLMITRCMQMGFPREA 253
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 330/592 (55%), Gaps = 35/592 (5%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
QLH H++ + ++FV L+ MY G LD AR +FD PK +V++W +IS Y +
Sbjct: 139 QLHGHVLKH--GLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 86 HGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYV 140
G EE RLF + + P +L VL +C D GK VH+ +++++ +
Sbjct: 197 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 256
Query: 141 ANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
NA+I+MY+ C D A +F +M R++ISW ++++ F A F KM ++
Sbjct: 257 ENAMIDMYA-DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 315
Query: 199 ------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
EAL LFR +Q + PD T VL ACA L + +
Sbjct: 316 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRT 375
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I + ++D + NALI Y +CG + ++ +F +M+ D +W +++ A++G ++
Sbjct: 376 YIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 435
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL +FSNM ++ PD T++ +LSAC+H GLV +G K F M HG+ P + HY C+V
Sbjct: 436 ALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLV 495
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLL R GR+ EA ++I MP++ +S++W LL CR + E+ +AE+ ++ +LEP +
Sbjct: 496 DLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGA 555
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V + NIY +N R +R+ M ++K PG S IE+ RVHEF +G + HPQ +
Sbjct: 556 VYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKN 615
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I KL+++ LK GY P+ S DI EE KE ++ HSEKLA+ F ++N
Sbjct: 616 IDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPP----G 671
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+C+DCHN KL S + +E++VRD RFHHFK +CSC DYW
Sbjct: 672 VTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 218/484 (45%), Gaps = 73/484 (15%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPN-EP--QDLFVTNHLINMYAKFGY 57
F T +L C ++ Q Q+H I N P Q+ +T + Y F Y
Sbjct: 14 FSPPTHPLISLLETCE---SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 70
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSL 110
AR LFDE+P+ N+ W +I GY++ + L+ +L +Y FP F
Sbjct: 71 ---ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 127
Query: 111 ASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNV 168
+ I+ +Y G+ +H LK L +V+V AL+ MY C D A VF+ +V
Sbjct: 128 FTRDIALEY--GRQLHGHVLKHGLQYNVFVHTALVQMYL-LCGQLDTARGVFDVCPKADV 184
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
I+WN +I+A+ K+ EE+ LF ++ + + P T +VL AC+
Sbjct: 185 ITWNMIISAYN-------------KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 231
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC------------------------ 264
L R VHS + E + V+ NA+I YA C
Sbjct: 232 LKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTI 291
Query: 265 -------GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
G I +++ FDKM D VSW +++ Y + KEAL+LF NM NV+PD
Sbjct: 292 VSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 351
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T VS+L+AC+H G ++ G + + ++ + + L ++D+ + G + +AE + R
Sbjct: 352 FTMVSVLTACAHLGALELGEWI-RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFR 410
Query: 375 EMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
EM + D W+ ++ + HGE L ++ + LK D + ++ + + +G
Sbjct: 411 EMS-QRDKFTWTAMIVGLAVNGHGEKAL-DMFSNMLKASILPDEITYIGVLSACTHTGLV 468
Query: 433 NKAR 436
+K R
Sbjct: 469 DKGR 472
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 166/361 (45%), Gaps = 31/361 (8%)
Query: 98 SLLQYFFPNEFSLASVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE- 155
S L+ F P L S+L +C+ + + VH A+K L+A+ + N ++ C E
Sbjct: 9 SALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTF---CCTHEY 65
Query: 156 -----AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A ++F+ + N+ WN+MI + +++ + + L+ ++ R
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGY-------------SRLDFPQLGVSLYLEMLRR 112
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ PD TF + K + + +H + K+G + + + AL+ Y CG + +
Sbjct: 113 GVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTA 172
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+ VFD D+++WN I+ AY G+ +E+ +LF M V P + T V +LSACS
Sbjct: 173 RGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKL 232
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
++ G KV HS ++N V L M+D+ G + A + R M D + W+
Sbjct: 233 KDLRTGKKV-HSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTT 290
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
++ GE ++A ++ D + + M + Y S F +A + + M+ + V
Sbjct: 291 IVSGFTNLGEI---DVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV 347
Query: 448 R 448
+
Sbjct: 348 K 348
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 329/557 (59%), Gaps = 31/557 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+V I++Y+K G + A LF E + ++V++ A+I GY +G E LF L+
Sbjct: 257 YVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELM-- 314
Query: 103 FFPNEFSLASVLISCDYLHGKL-----VHALALKFSLDAHVYVANALINMYSK-SCADEA 156
+S L+S + G L +H +LK + +H V+ AL +YSK + + A
Sbjct: 315 -LSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESA 373
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
K+F+ +++ SWN+MI+ + L AI LF +M+N E +P+
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSE-------------FSPNP 420
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T + +L ACA L VH L+ FE ++ ALI YA+CGSI+ ++++FD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDF 480
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M + V+WN+++ Y LHG +EAL +FS M + P TF+ +L ACSHAGLV+EG
Sbjct: 481 MPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEG 540
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+++F+SM+ +G P + HYAC+VD+LGR G + A + I MP++P +W LLG+CR
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACR 600
Query: 394 KHGETRLAELAATKLKQLEPGDSLGF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPG 452
H +T LA + KL +L+P D++G+ V +SNI+ ++ +A +R+ K ++ K PG
Sbjct: 601 IHKDTNLARTVSEKLFELDP-DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 453 LSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE 512
+ IEI H F SG + HPQ +AI +KLE+L G+++ GY PET LALHD+EEE +E
Sbjct: 660 YTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEEREL 719
Query: 513 QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
+ HSE+LA+ F ++ + IRI+KN+R+C+DCH KL S + + IVVRD+
Sbjct: 720 MVKVHSERLAIAFGLIA----TEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDA 775
Query: 573 NRFHHFKDRICSCNDYW 589
NRFHHFKD +CSC DYW
Sbjct: 776 NRFHHFKDGVCSCGDYW 792
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 168/393 (42%), Gaps = 31/393 (7%)
Query: 20 NIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
+I Q H ++ + F N D+ + L + G + AR +F + + +V +
Sbjct: 32 SISHLAQTHAQIVLHGFRN---DISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 79 LISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHGKLVHALALKF 132
L+ G++ + + +F L + PN + A + + D G ++H A+
Sbjct: 89 LMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVD 148
Query: 133 SLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
D+ + + + ++ MY K ++A KVF+ M ++ I WN+MI+ +R ++ ++I++F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+ NE D T +L A A L R +HSL K G
Sbjct: 209 RDLINESCTRL------------DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ I Y++CG I ++ +F + D+V++N+++ Y +G+ + +L LF +
Sbjct: 257 YVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+ S+T VSL+ H L+ H + + + ++ I
Sbjct: 317 GAKLKSSTLVSLVPVSGHLMLIY----AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIES 372
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
A KL E P E W+ ++ ++G T A
Sbjct: 373 ARKLFDESP-EKSLPSWNAMISGYTQNGLTEDA 404
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA G + +H+ ++ + E ++V+ LI MYAK G + +AR LFD MPK
Sbjct: 426 ILSACAQLGALSLGKWVHD-LVRSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDFMPK 483
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLV 125
+N V+W +ISGY HG+ +E +F +L P + VL +C H LV
Sbjct: 484 KNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACS--HAGLV 537
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/565 (38%), Positives = 334/565 (59%), Gaps = 35/565 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQ 101
F N L+ MYAK G +DD++ LF+ R++VSW +IS ++Q E F +L+
Sbjct: 149 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 208
Query: 102 YFFPNEFSLASVLISCDYLH----GKLVHALALKFS-LDAHVYVANALINMYSKSC--AD 154
+ ++ASVL +C +L GK +HA L+ + L + +V +AL++MY +C +
Sbjct: 209 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYC-NCRQVE 267
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+VF+++ R + WN+MI+ + L+ +A+ LF +M ++ G+ P
Sbjct: 268 SGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEM------------IKVAGLLP 315
Query: 215 DWCTFSIVLKACA-GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+ T + V+ AC L +H+ + D + +AL+ YA+CG ++LS++V
Sbjct: 316 NTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRV 375
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--------NVQPDSATFVSLLSACS 325
F++M ++++WN ++ A +HG+ +EAL+LF NM +P+ TF+++ +ACS
Sbjct: 376 FNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACS 435
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV-I 384
H+GL+ EG +F+ M +HGV P DHYAC+VDLLGR G++ EA +L+ MP E D V
Sbjct: 436 HSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGA 495
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
WS LLG+CR H L E+AA L LEP + +V +SNIY +G +NKA +RK M+
Sbjct: 496 WSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQ 555
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
V+K PG SWIE + VH+F +G HPQ E + LE L +++ GYVP+TS LH+
Sbjct: 556 MGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHN 615
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
++E+ KE L HSEKLA+ F I+N + IR+ KN+R+C DCH K S ++
Sbjct: 616 VDEDEKENLLCGHSEKLAIAFGILNT----PPGTTIRVAKNLRVCNDCHAATKFISKIME 671
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD RFHHFK+ CSC DYW
Sbjct: 672 REIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 165/361 (45%), Gaps = 46/361 (12%)
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GK 123
P R+ SW + + + E + + + P+ F+ +VL + L G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 124 LVHALALKFSL-DAHVYVANALINMYSKSCA---------------------DEAWKVFE 161
+HA A+KF + V VAN L+NMY K D++ +FE
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
+ R+++SWN+MI++ F++ EAL FR + EG+ D T +
Sbjct: 173 SFVDRDMVSWNTMISS-------------FSQSDRFSEALAFFRLMVLEGVELDGVTIAS 219
Query: 222 VLKACAGLVTERHASAVHSLIAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
VL AC+ L +H+ + + +++ + +AL+ Y C + ++VFD +
Sbjct: 220 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 279
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKV 336
+ WN+++ YA +G ++AL LF M + P++ T S++ AC H+ K
Sbjct: 280 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKE 339
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H+ + + + + +VD+ + G + + ++ EMP + + + W+VL+ +C HG
Sbjct: 340 IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHG 398
Query: 397 E 397
+
Sbjct: 399 K 399
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 178/351 (50%), Gaps = 34/351 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A++ AC+ + ++H +++ N + ++ FV + L++MY ++ R +FD +
Sbjct: 218 ASVLPACSHLERLDVGKEIHAYVLRN-NDLIENSFVGSALVDMYCNCRQVESGRRVFDHI 276
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDY-----LH 121
R + W A+ISGYA++G E+ LF +++ PN ++ASV+ +C +
Sbjct: 277 LGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAK 336
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK +HA A++ L + + V +AL++MY+K C + + +VF M +NVI+WN +I A
Sbjct: 337 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIM---A 393
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQL----QREGMA-PDWCTFSIVLKAC--AGLVTER 233
C + + EEAL LF+ + R G A P+ TF V AC +GL++E
Sbjct: 394 CGMHGKG----------EEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISE- 442
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT--YHDLVSWNSILKA 291
+ + + +G E + ++ R G + + ++ + M + + +W+S+L A
Sbjct: 443 GLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 502
Query: 292 YALHGQAKEALQLFSN-MNVQPDSATFVSLLSAC-SHAGLVQEGNKVFHSM 340
+H + N ++++P+ A+ LLS S AGL + +V +M
Sbjct: 503 CRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNM 553
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 1 FLHSTQIYATLFHACALH--GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYL 58
L +T A++ AC +H I + ++H + I N D+ V + L++MYAK G L
Sbjct: 313 LLPNTTTMASVMPAC-VHSLAAIAKGKEIHAYAIRNM--LASDITVGSALVDMYAKCGCL 369
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF------PNEFSLAS 112
+ +R +F+EMP +NV++W LI HG EE LF +++ PNE + +
Sbjct: 370 NLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFIT 429
Query: 113 VLISCDY---------LHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENM 163
V +C + L ++ H ++ + D + V + L +EA+++ M
Sbjct: 430 VFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLL---GRAGQLEEAYELVNTM 486
Query: 164 --EFRNVISWNSMIAAFR 179
EF V +W+S++ A R
Sbjct: 487 PAEFDKVGAWSSLLGACR 504
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/592 (36%), Positives = 347/592 (58%), Gaps = 29/592 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A L A + K Q+H ++ N ++FV N L++ Y+K +D+ LF E
Sbjct: 244 FAALLSAAVGLDDTKFGQQVHGFVLKT--NFVWNVFVGNALLDYYSKHDQVDEVGKLFXE 301
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVL-ISCDYLH---G 122
MP+ + +S+ +I+ YA +G +E F LF L F +F A++L I+ L+ G
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMG 361
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H A+ + V NAL++MY+K D EA K+F+N+ ++ + W +MI+A+
Sbjct: 362 RQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAY--- 418
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ EE + +F ++R G+ D TF+ +L+ACA L + +HSL
Sbjct: 419 ----------VQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSL 468
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + GF + +AL+ YA+CG ++ + + F +M + VSWN+++ AYA +G
Sbjct: 469 LIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGT 528
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L F M +PDS +F+S+LSACSH G V+E F+SM + + V P+ +HY MVD
Sbjct: 529 LNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVD 588
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSL 417
+L R GR EAEKL+ EMP EP ++WS +L SCR H LA+ AA +L +E D+
Sbjct: 589 VLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAA 648
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
++ MSNIY ++G ++ ++K M+ VRK P SW+EI+++ H F++ K HP+ +
Sbjct: 649 PYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKK 708
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +K+ L +++ GY P+T+ ALHD++E K E L +HSE+ A+ FA+MN +
Sbjct: 709 ILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMN----TPDG 764
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I +MKN+R C DCH +K+ S ++ +EI+VRDS+RFHHFKD +CSC DYW
Sbjct: 765 SPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 188/398 (47%), Gaps = 50/398 (12%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A Q+ + M ++ N +I+ + KFG L AR LFD M +R VSWT
Sbjct: 57 GDLVHAHQVFDQM------PAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV----HALALKFS 133
LI GY Q ++E FRL+ + + P+ +L ++L L K V H +K
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 134 LDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ ++ V N+L++ Y K+ C A ++F++M ++ +++NS++ + L +AIELF
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFL 230
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
++ N G+ P TF+ +L A GL + VH + K F +
Sbjct: 231 ELHNS-------------GIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN--- 309
+ NAL+ Y++ + ++F +M D +S+N ++ +YA +GQ KE+ LF +
Sbjct: 278 VGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTR 337
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKV----------FHSMLENHGVVPQLDHYACMVDL 359
F +LLS + + ++ G ++ F S +EN +VD+
Sbjct: 338 FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN-----------ALVDM 386
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ EA+K+ + + +V W+ ++ + + G+
Sbjct: 387 YAKCNGDKEAQKIFDNIACK-STVPWTAMISAYVQKGK 423
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/594 (36%), Positives = 335/594 (56%), Gaps = 61/594 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D N +I+M+ +F D A LFD+M ++VSW ++I+GY G F +
Sbjct: 209 KDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFM 268
Query: 100 LQ--YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L+ P++F+L SVL +C GK +HA ++ +D V NALI+MY+KS A
Sbjct: 269 LKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGA 328
Query: 154 ----------------------------------DEAWKVFENMEFRNVISWNSMIAAFR 179
D A +F++++ R+V++W +MI +
Sbjct: 329 VEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYA 388
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L + +AL LFR + REG P+ T + VL + L + H +H
Sbjct: 389 QNGLIS-------------DALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLH 435
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQA 298
++ + + NALI Y+R GSI ++++F+ + +Y D ++W S++ + A HG
Sbjct: 436 AVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLG 495
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
EA++LF M N++PD T+V +LSAC+H GLV++G F+ M H + P HYAC
Sbjct: 496 NEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYAC 555
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
M+DLLGR G + EA IR MP+EPD V W LL SCR H LA++AA KL ++P +
Sbjct: 556 MIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNN 615
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S ++ ++N G + A +RK MK V+K G SW++I+N+VH F HPQR
Sbjct: 616 SGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQR 675
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+AI+ + ++ ++K MG++P+T+ LHD+E+E KE+ L HHSEKLA+ FA++N
Sbjct: 676 DAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTP---- 731
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + +RIMKN+R+C DCH+ ++ S L+ +EI+VRD+ RFHHFKD CSC DYW
Sbjct: 732 KHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 194/449 (43%), Gaps = 97/449 (21%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR------- 94
+F+TN+L+N+Y K G DA LFDEMP + SW ++S +A+ GN + R
Sbjct: 48 VFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQ 107
Query: 95 -----------------LFCSLLQYFF--------PNEFSLASVLISCDYLH----GKLV 125
LF S + F P +F+ +VL SC GK V
Sbjct: 108 PDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKV 167
Query: 126 HALALKFSLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAA-FRACK 182
H+ +K V VAN+L+NMY+K C D A VF+ M ++ +WN+MI+ + C+
Sbjct: 168 HSFVVKLGQSGVVPVANSLLNMYAK-CGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQ 226
Query: 183 LEAQAIELFAKMKNEE------------------EALFLFR-QLQREGMAPDWCTFSIVL 223
+ A+ LF +M + + AL F L+ + PD T VL
Sbjct: 227 FDL-ALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVL 285
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL-------------- 269
ACA + + +H+ I + + + NALI YA+ G++ +
Sbjct: 286 SACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLN 345
Query: 270 -------------------SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
++ +FD + + D+V+W +++ YA +G +AL LF M
Sbjct: 346 VIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIR 405
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
+P++ T ++LS S + G K H++ V + ++ + R G I
Sbjct: 406 EGPKPNNYTLAAVLSVISSLASLDHG-KQLHAVAIRLEEVSSVSVGNALITMYSRSGSIK 464
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+A K+ + D++ W+ ++ S +HG
Sbjct: 465 DARKIFNHICSYRDTLTWTSMILSLAQHG 493
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 172/381 (45%), Gaps = 69/381 (18%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA--------------- 53
++ ACA ++K Q+H H++ + V N LI+MYA
Sbjct: 282 GSVLSACANRESLKLGKQIHAHIVRADVDIAGA--VGNALISMYAKSGAVEVAHRIVEIT 339
Query: 54 ------------------KFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL 95
K G +D AR +FD + R+VV+WTA+I GYAQ+G + L
Sbjct: 340 GTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVL 399
Query: 96 FCSLLQYFF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK 150
F +++ PN ++LA+VL L HGK +HA+A++ + V V NALI MYS+
Sbjct: 400 FRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSR 459
Query: 151 SCA-DEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
S + +A K+F ++ +R+ ++W SMI + L +AIELF KM
Sbjct: 460 SGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKM-------------L 506
Query: 209 REGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
R + PD T+ VL AC GLV E+ S + + + E + +I R G
Sbjct: 507 RINLKPDHITYVGVLSACTHVGLV-EQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGL 565
Query: 267 ISLSKQVFDKMTYH-DLVSWNSILKAYALHGQ------AKEALQLFSNMNVQPDSATFVS 319
+ + M D+V+W S+L + +H A E L L N S +++
Sbjct: 566 LEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNN----SGAYLA 621
Query: 320 LLSACSHAGLVQEGNKVFHSM 340
L + S G ++ KV SM
Sbjct: 622 LANTLSACGKWEDAAKVRKSM 642
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 187/445 (42%), Gaps = 88/445 (19%)
Query: 110 LASVLISCDYLHGKLVHALALKFSLD-AHVYVANALINMYSKS-CADEAWKVFENMEFRN 167
L S + S D G+ +HA +K L V++ N L+N+Y K+ + +A ++F+ M +
Sbjct: 19 LQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKT 78
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEE------------------ALFLFRQLQR 209
SWN++++A A +F ++ + A+ F ++
Sbjct: 79 TFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVS 138
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
G++P TF+ VL +CA VHS + K G +AN+L++ YA+CG +
Sbjct: 139 SGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVM 198
Query: 270 SKQVFDK-------------------------------MTYHDLVSWNSILKAYALHGQA 298
+K VFD+ MT D+VSWNSI+ Y G
Sbjct: 199 AKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYD 258
Query: 299 KEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
AL+ FS M +++PD T S+LSAC++ ++ G ++ H + + D
Sbjct: 259 IRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQI-------HAHIVRAD--- 308
Query: 355 CMVDLLGRVGRIL----------EAEKLIREMPMEP--DSVIWSVLLGSCRKHGETRLAE 402
VD+ G VG L E I E+ P + + ++ LL K G+ A
Sbjct: 309 --VDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPAR 366
Query: 403 LAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM--KGSRVRKYPGLSWIEIEN 460
LK D + + M Y +G + A ++ + M +G + Y + + + +
Sbjct: 367 AIFDSLKH---RDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVIS 423
Query: 461 RVHEFASGGKRHPQREAIFKKLEEL 485
+ G + H A+ +LEE+
Sbjct: 424 SLASLDHGKQLH----AVAIRLEEV 444
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 325/557 (58%), Gaps = 29/557 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ + ++I G L +AR +FDEMP+RNVV+WT++ISGYA + + +LF +
Sbjct: 169 KDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM 228
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH-VYVANALINMY--SKSCADEA 156
NE + ++L G++ A L ++ V N +I + +
Sbjct: 229 PD---KNEVTWTAMLKGYTR-SGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKAR 284
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
W VF+ M+ ++ +W+++I + E + EL EAL LF +QREG+ P++
Sbjct: 285 W-VFDQMKEKDDGTWSALIKIY-----ERKGFEL--------EALALFSLMQREGVRPNF 330
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
+ +L C L + H VHS + + F+ D +++ LI Y +CG + K+VFD+
Sbjct: 331 PSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDR 390
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
+ D+V WNSI+ YA HG ++AL++F M PD TF+ +LSAC + G V+EG
Sbjct: 391 FSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEG 450
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
++F SM + V + +HYACMVDLLGR G++ EA LI MP+E D+++W LL +CR
Sbjct: 451 LEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACR 510
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H LAE+AA KL QLEP + ++ +SN+Y + +RK M+ V K PG
Sbjct: 511 THKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGC 570
Query: 454 SWIEIENRVHEFASGGK-RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE 512
SWIE++N+VH F GG HP+ E I KKLE+L L+ GY P+ S +HD++EE K
Sbjct: 571 SWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVH 630
Query: 513 QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
L HHSEK+A+ + ++ IR+MKN+R+C DCH+ +KL + + G+EI++RD+
Sbjct: 631 SLRHHSEKMAVAYGLLK----VPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDA 686
Query: 573 NRFHHFKDRICSCNDYW 589
NRFHHFKD +CSC D+W
Sbjct: 687 NRFHHFKDGLCSCRDFW 703
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 179/385 (46%), Gaps = 55/385 (14%)
Query: 33 NNFPNEPQDLFVT---------NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
N P E Q LF N L++ Y K G + +AR +FD+MP+RNVVSWT+++ GY
Sbjct: 60 NKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGY 119
Query: 84 AQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVHALALKFSLDAHVYVAN 142
Q G +E LF + P + ++ +V++ G++ A L + VA+
Sbjct: 120 VQEGLIDEAELLF-----WRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVAS 174
Query: 143 ALINMYSKSCAD----EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
NM C++ EA ++F+ M RNV++W SMI+ + A +LF M ++
Sbjct: 175 T--NMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKN 232
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANA 256
E T++ +LK +G + E A ++ K N
Sbjct: 233 EV-----------------TWTAMLKGYTRSGRINE-AAELFKAMPVK-----PVAACNG 269
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
+I + G + ++ VFD+M D +W++++K Y G EAL LFS M V+P+
Sbjct: 270 MIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPN 329
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEK 371
+ +S+LS C + G +V ++ +H LD Y + ++ + + G ++ ++
Sbjct: 330 FPSIISILSVCGSLASLDHGRQVHSQLVRSHF---DLDIYVSSVLITMYIKCGDLVTGKR 386
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHG 396
+ + D V+W+ ++ +HG
Sbjct: 387 VFDRFSSK-DIVMWNSIIAGYAQHG 410
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 169/393 (43%), Gaps = 71/393 (18%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
+T I+ +A+ G +D AR++FD++ + V SW A+++GY + E +LF + +
Sbjct: 18 ITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER- 76
Query: 104 FPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENM 163
N S ++ YV N +I+ EA KVF+ M
Sbjct: 77 --NTISWNGLVSG----------------------YVKNGMIS--------EARKVFDKM 104
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
RNV+SW SM+ + L +A LF +M + + +++++L
Sbjct: 105 PERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEK-----------------NVVSWTVML 147
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
GL+ + L + D V + +I G +S ++++FD+M ++V
Sbjct: 148 ---GGLIEDGRVDEARRLFDMIPVK-DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVV 203
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQPDS--ATFVSLLSACSHAGLVQEGNKVFHSML 341
+W S++ YA++ + A +LF V PD T+ ++L + +G + E ++F +M
Sbjct: 204 AWTSMISGYAMNNKVDVARKLF---EVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAM- 259
Query: 342 ENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
P AC M+ G G + +A + +M E D WS L+ + G
Sbjct: 260 ------PVKPVAACNGMIMGFGLNGEVGKARWVFDQMK-EKDDGTWSALIKIYERKG-FE 311
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
L LA L Q E G F + +I + GS
Sbjct: 312 LEALALFSLMQRE-GVRPNFPSIISILSVCGSL 343
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
F I I +AR G I ++ +FD + + SWN+I+ Y + + EA +LF
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 307 NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
M + ++ ++ L+S G++ E KVF M E + V + MV + G I
Sbjct: 72 KMP-ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVV-----SWTSMVRGYVQEGLI 125
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNI 425
EAE L MP E + V W+V+LG + G R+ E A +L + P D + M
Sbjct: 126 DEAELLFWRMP-EKNVVSWTVMLGGLIEDG--RVDE--ARRLFDMIPVKDVVASTNMIGG 180
Query: 426 YCLSGSFNKARLIRKEM 442
C G ++AR I EM
Sbjct: 181 LCSEGRLSEAREIFDEM 197
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ C ++ Q+H ++ + + D++V++ LI MY K G L + +FD
Sbjct: 335 SILSVCGSLASLDHGRQVHSQLVRSHFD--LDIYVSSVLITMYIKCGDLVTGKRVFDRFS 392
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVHAL 128
+++V W ++I+GYAQHG E+ +F + P+E + VL +C Y GK+ L
Sbjct: 393 SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYT-GKVKEGL 451
Query: 129 AL------KFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAAFRA 180
+ K+ +D ++++ ++ +EA + ENM + I W ++++A R
Sbjct: 452 EIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRT 511
Query: 181 CK 182
K
Sbjct: 512 HK 513
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/596 (35%), Positives = 341/596 (57%), Gaps = 36/596 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L CA + + ++H ++ + D + N LI MY K G + +AR +FD+
Sbjct: 27 YVLLLKKCADSKALLEGKRVHSCLVKD--GYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84
Query: 68 MPKRN--VVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL---- 120
+ ++N V+SW +I Y Q+G +E LF ++ L+ N+ +L + + +C L
Sbjct: 85 IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G++VHA+A+ L++ V +L+NM+ K D A VF+++ +N+++WN+M+A +
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204
Query: 180 A---CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
CK +A+ +FR + EG+ PD TF ++ ACA L
Sbjct: 205 QNWQCK----------------KAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGR 248
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH I G D + A++H Y +CG + ++ +FD + + V+W++IL AYA +G
Sbjct: 249 MVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNG 308
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
EA++L+ M ++ + TF+ LL ACSHAG +G F SM+ + GVVP +HY
Sbjct: 309 YETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHY 368
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
++DLLGR G++ +E LI MP EPDS W LLG+CR HG+ A + +L+P
Sbjct: 369 LNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDP 428
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
DS ++ +SN+Y +G ++AR RK M+ + K PGLS IE+++RVHEF + K HP
Sbjct: 429 EDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHP 488
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
Q I ++E L ++K GYV + L D+EEE KE+ L++HSE+LA+ F +++
Sbjct: 489 QLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLIST--- 545
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + I+KN+R+C DCH +K S ++G++IVVRD+ RFHHF++ CSC DYW
Sbjct: 546 -PPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 119/237 (50%), Gaps = 10/237 (4%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+ ++LK CA VHS + K G+ D +IAN LI Y +CG I+ ++ VFD++
Sbjct: 26 TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85
Query: 278 TYH--DLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQE 332
D++SWN I+ AY +G KEAL LF M+++ + T ++ + AC+ +E
Sbjct: 86 QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G ++ H++ + + +V++ G+ + A + +P + + V W+ ++
Sbjct: 146 G-RIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRK-NLVTWNNMVAVY 203
Query: 393 RKHGETRLA--ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
++ + + A L+ ++P D++ F+ + + + + R++ ++ S +
Sbjct: 204 SQNWQCKKAIQVFRFMDLEGVQP-DAVTFLTIIDACAALAAHTEGRMVHDDITASGI 259
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/564 (40%), Positives = 336/564 (59%), Gaps = 32/564 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V L+ MY G +D AR FD +P +N+VSW A+++ Y +G A E LF ++
Sbjct: 370 DVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMK 429
Query: 100 LQYFFPNEFSLASVLISC-DYLHGKLVHALALKFSLDAH-VYVANALINMYSKSCA-DEA 156
Q PN+ S +VL C D + +HA + L A +AN ++ M+++S + +EA
Sbjct: 430 RQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEA 489
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
F+ ++ +SWN+ +AA A ++ A+ F +Q EG PD
Sbjct: 490 MAAFDATVVKDSVSWNTKVAALSA-------------REDLHGAITAFYTMQHEGFRPDK 536
Query: 217 CTFSIVLKACAGLVT-ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS-ISLSKQVF 274
T V+ CA L T E S L A E D V+ +A+++ A+CGS + +++F
Sbjct: 537 FTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLF 596
Query: 275 DKMT--YHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAG 328
+M DLV+WN+++ AYA HG ++AL+LF M +V+PDS+TFVS+LS CSHAG
Sbjct: 597 ARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAG 656
Query: 329 LVQEGNKVFHSMLENHGVVPQ-LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
LV++G F E G+ Q ++HYAC+VD+LGR+G + EAE IR+MP+ DSV+W+
Sbjct: 657 LVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTS 716
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LLG+C +G+ E AA +L DS+G+V +SNIY +G + + +R++M RV
Sbjct: 717 LLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRV 776
Query: 448 RKY-PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
+K PG S I ++NRVHEF + + HPQ + I+ +LE L G ++ GYVP+T L LHD+E
Sbjct: 777 KKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVE 836
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE KE+ L++HSEKLA+ F +++ R IR++KN+R+C DCH K + + +E
Sbjct: 837 EEQKEQLLWYHSEKLAIAFGLIS----VPHRHSIRVIKNLRVCKDCHTATKFIARVTQRE 892
Query: 567 IVVRDSNRFHHF-KDRICSCNDYW 589
I VRD NRFHHF KD CSC DYW
Sbjct: 893 IAVRDCNRFHHFGKDGECSCGDYW 916
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 199/424 (46%), Gaps = 40/424 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+DLFV L++ Y K G ++ A +F + +++ W A I A GN E R +
Sbjct: 164 RDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACA--GNDERPDRALLLV 221
Query: 100 ----LQYFFPNEFSLASVLISCDYLHGKL-----VHALALKFSLDAHVYVANALINMYSK 150
L+ PN S ++L SC H L +HA + V VA AL+ MY +
Sbjct: 222 RRMWLEGLLPNRASFVAILSSCGD-HSSLPLARSIHARVEELGFLGDVVVATALVTMYGR 280
Query: 151 -SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
DE+ VFE M RN +SWN+MIAAF C + A ++ +M Q+
Sbjct: 281 CGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRM-------------QQ 327
Query: 210 EGMAPDWCTFSIVLKACAGLVTER--HASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
EG P+ TF LKA ++ ++A+H IA G E D ++ AL+ Y G+I
Sbjct: 328 EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAI 387
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSAC 324
++ FD + ++VSWN++L AY +G+A+EA++LF+ M Q P+ +++++L C
Sbjct: 388 DRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC 447
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYA-CMVDLLGRVGRILEAEKLIREMPMEPDSV 383
V E + H+ + +G+ Q A +V + R G + EA + + DSV
Sbjct: 448 ED---VSEARSI-HAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAF-DATVVKDSV 502
Query: 384 IWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
W+ + S R+ + + + P D V + ++ G+ R I+++
Sbjct: 503 SWNTKVAALSAREDLHGAITAFYTMQHEGFRP-DKFTLVSVVDVCADLGTLELGRSIQQQ 561
Query: 442 MKGS 445
+ +
Sbjct: 562 LSAA 565
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 194/429 (45%), Gaps = 39/429 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ A L C ++ Q QLH ++ ++ + N+L+ MY+K LDDA F
Sbjct: 25 ETLAGLLRRCIGDADLAQGRQLHRQIVKQ--GLARNDLLGNYLVQMYSKCRSLDDANAAF 82
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL----LQYFFPNEFSLASVL---ISCD 118
+ R + +W LI A + F L+ + PN ++ +VL S D
Sbjct: 83 SALRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGD 139
Query: 119 -------YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVIS 170
++VH L+ ++VA AL++ Y K C + A +VF ++ ++I
Sbjct: 140 PSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLIC 199
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
WN AA AC + + AL L R++ EG+ P+ +F +L +C
Sbjct: 200 WN---AAIMACA---------GNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHS 247
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+ A ++H+ + + GF D V+A AL+ Y RCGS+ S VF+ M + VSWN+++
Sbjct: 248 SLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIA 307
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLL-SACSHAGLVQEGNKVFHSMLENHGV 346
A+A G A ++ M +P+ TFV+ L +ACS + + H + G+
Sbjct: 308 AFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGL 367
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-EL-A 404
+ +V + G G I A +P + + V W+ +L + +G R A EL A
Sbjct: 368 EGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK-NIVSWNAMLTAYGDNGRAREAMELFA 426
Query: 405 ATKLKQLEP 413
A K + L P
Sbjct: 427 AMKRQSLAP 435
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 163/348 (46%), Gaps = 44/348 (12%)
Query: 20 NIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
++ +A +H ++ N F E + N ++ M+A+ G L++A FD ++ VSW
Sbjct: 449 DVSEARSIHAEVVGNGLFAQESS---IANGVVRMFARSGSLEEAMAAFDATVVKDSVSWN 505
Query: 78 ALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLV-HALALK 131
++ + + F ++ + F P++F+L SV+ C L G+ + L+
Sbjct: 506 TKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAA 565
Query: 132 FSLDAHVYVANALINMYSK--SCADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQA 187
++ V V +A++NM +K S DE ++F M + +++++WN+MIAA
Sbjct: 566 IEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA---------- 615
Query: 188 IELFAKMKNEEEALFLFRQL-QREGMAPDWCTFSIVLKAC--AGLVTERHASAVHS-LIA 243
+A+ + +AL LFR + QR + PD TF VL C AGLV + +H +A
Sbjct: 616 ---YAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVED----GIHCFFLA 668
Query: 244 K--YGFEDDTVIANA-LIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKAYALHGQ-- 297
+ G E V A L+ R G + ++ KM D V W S+L A + +G
Sbjct: 669 REVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLE 728
Query: 298 -AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
+ A + F + + DS +V L + + AG ++ +V M E
Sbjct: 729 GGERAARAFIEL-YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERR 775
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 338/562 (60%), Gaps = 32/562 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+LFV ++L +MY+K G L +A +FD+MP+++ V+WTA+I GYA++G+ E F +
Sbjct: 305 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 364
Query: 101 --------QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
Q+ F + S + L D K +H K + V V NALI+MY+KS
Sbjct: 365 REGLVGADQHVFCSVLSASGGLK--DGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSM 422
Query: 153 -ADEAWKVFE-NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ A +V + + NV+S SMI + +E +E EAL ++ +L+R+
Sbjct: 423 DVESASRVLKIDPGGWNVVSGTSMIDGY----IETDCVE---------EALVIYVELRRQ 469
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ P+ TFS ++K CA + +H+ + K D+ + + L+ Y +CG ISLS
Sbjct: 470 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 529
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
Q+F+++ Y ++WN+++ +A HG +EA+Q F M ++P+ FVSLL+ACSHA
Sbjct: 530 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 589
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV EG K F+SM E HG+ P+ +HY+C++D GR GR+ EA K I EMP++P++ W
Sbjct: 590 GLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCS 649
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LLG+CR G L E+AA L +LEPG++ V +S IY G + + +RK M+ SR+
Sbjct: 650 LLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRI 709
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG SW++ + H F S HPQ++ I++KLEEL ++K GY+P+TS ++E+
Sbjct: 710 KKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLED 769
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
KE L +HSE++A+ FA++ S+ + +I + KN+RIC+DCH K + ++I
Sbjct: 770 IAKERILRYHSERIAVAFALI---SMPATKPII-VKKNLRICIDCHTAFKFICKVERRDI 825
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+VRD++RFHHF + CSC DYW
Sbjct: 826 IVRDNSRFHHFVNGRCSCGDYW 847
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 196/404 (48%), Gaps = 28/404 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+L +C G++++ LH ++ + F+ NHLI MY+ L A LF M
Sbjct: 174 ASLLQSCGRAGDLRRGRLLHARLVLS-GAAAASTFLANHLITMYSHCADLASALRLFAAM 232
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVH- 126
P+RN VSWT L+SG +Q+ + F ++ + P F+L+S + L L
Sbjct: 233 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRAR 292
Query: 127 --ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+ D ++VA+ L +MYSK EA +VF+ M ++ ++W +M
Sbjct: 293 SCTASASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAM--------- 343
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGM-APDWCTFSIVLKACAGLVTERHASAVHSLI 242
I+ +AK + E A+ FR ++REG+ D F VL A GL + ++H +
Sbjct: 344 ----IDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCV 399
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVF--DKMTYHDLVSWNSILKAYALHGQAKE 300
K GFE + + NALI YA+ + + +V D + ++VS S++ Y +E
Sbjct: 400 TKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW-NVVSGTSMIDGYIETDCVEE 458
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL ++ + V+P+ TF S++ C+ L+++G ++ H+ + ++ + +V
Sbjct: 459 ALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL-HAQVIKTDLIRDSFVGSTLV 517
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D+ G+ G I + +L E+ D + W+ ++ +HG R A
Sbjct: 518 DMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHGHGREA 560
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ CA+ ++Q QLH +I + +D FV + L++MY K G + + LF+E
Sbjct: 478 FSSMIKGCAMQALLEQGAQLHAQVIKT--DLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 535
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV- 125
+ R ++W A+I+ +AQHG+ E + F ++ PN + S+L +C H LV
Sbjct: 536 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS--HAGLVD 593
Query: 126 HALALKFSL-DAHVYVA-----NALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAA 177
L +S+ +AH + +I+ Y ++ DEA+K M + N W S++ A
Sbjct: 594 EGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 653
Query: 178 FR 179
R
Sbjct: 654 CR 655
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+L +C G++++ LH ++ + F+ NHLI MY+ L A LF M
Sbjct: 24 ASLLQSCGRAGDLRRGRLLHARLVLS-GAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 69 PKRNVVSWTALISGYAQH 86
P+RN VSWT L+SG +Q+
Sbjct: 83 PRRNAVSWTTLVSGLSQN 100
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 140/347 (40%), Gaps = 50/347 (14%)
Query: 110 LASVLISC----DYLHGKLVHA-LALKFSLDAHVYVANALINMYSKSCAD--EAWKVFEN 162
LAS+L SC D G+L+HA L L + A ++AN LI MYS CAD A ++F
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH-CADLASALRLFAA 81
Query: 163 MEFRNVISWNSMIAAF-----------------RACKLEAQAI-------------ELFA 192
M RN +SW ++++ RA + I L A
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAA 141
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIV-----LKACAGLVTERHASAVHS-LIAKYG 246
+ L + QR P + V L++C R +H+ L+
Sbjct: 142 SHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGA 201
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA---LHGQAKEALQ 303
T +AN LI Y+ C ++ + ++F M + VSW +++ + +H A A
Sbjct: 202 AAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFA 261
Query: 304 LFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
V P F +A + A L + + G +L + + D+ +
Sbjct: 262 AMRRAGVAP--TRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMYSKC 319
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
G + EA ++ +MP + D+V W+ ++ K+G A L+ +K+
Sbjct: 320 GLLSEACRVFDQMP-QKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKR 365
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 325/563 (57%), Gaps = 32/563 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +I Y G ++D LF EMP RNV+SWT++I G QHG +EE LF +
Sbjct: 133 RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQM 192
Query: 100 LQYFF---PNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+ P + V+ +C G +HA K Y++ ALI Y+ +C
Sbjct: 193 MGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA-NC 251
Query: 153 A--DEAWKVFENMEFRNVISWNSMIAAFRA-CKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+++ +VF NV+ W +++ + CK E+AL +F ++ R
Sbjct: 252 KQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK--------------HEDALKVFGEMMR 297
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
EG+ P+ +F+ L +C GL +H+ K G E D + N+LI Y RCG+++
Sbjct: 298 EGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLND 357
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+F +++ ++VSWNS++ A HG AL F+ M V+PD TF LLSACSH
Sbjct: 358 GVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSH 417
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+G+ Q+G +F EN +LDHYACMVD+LGR G++ EAE+LIR MP++ +S++W
Sbjct: 418 SGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWL 477
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
VLL +C H + +AE AA + LEP S +V +SN+Y + ++ IR+EMK
Sbjct: 478 VLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRG 537
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
+ K PG SWI I+ +EF SG + HP + I++KLE L G+LK +GYVP+ ALHD+E
Sbjct: 538 ITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVE 597
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
+E KE L +HSE+LA+ F +++ E S I +MKN+R+C DCH+ +KL + ++ ++
Sbjct: 598 DEQKEVMLSYHSERLAIGFGLIST----VEGSTITVMKNLRVCGDCHSAIKLIAKIVRRK 653
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+VRDS RFHHF D CSC DYW
Sbjct: 654 IIVRDSTRFHHFMDGRCSCGDYW 676
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 181/423 (42%), Gaps = 63/423 (14%)
Query: 29 EHMINNFPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG 87
+H + F P +D+ N +I L AR LFDEMP+R+VVSWT +I+G+ Q G
Sbjct: 59 DHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFG 118
Query: 88 NAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINM 147
E LF Y P + N++I
Sbjct: 119 KIEVAEGLF-----YKMPFR-----------------------------DIAAWNSMI-- 142
Query: 148 YSKSC---ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
Y C ++ ++F+ M RNVISW SMI + EEAL LF
Sbjct: 143 YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLD-------------QHGRSEEALGLF 189
Query: 205 RQLQREG--MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
RQ+ G + P T+ V+ ACA +H+ + K G+ D I+ ALI YA
Sbjct: 190 RQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA 249
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
C + S +VF + ++V W +++ Y L+ + ++AL++F M V P+ ++F S
Sbjct: 250 NCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTS 309
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
L++C + G ++ H+ G+ + ++ + R G + + + + + +
Sbjct: 310 ALNSCCGLEALDWGREI-HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-K 367
Query: 380 PDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
+ V W+ ++ C +H G LA +EP D + F + + SG K R
Sbjct: 368 KNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP-DEITFTGLLSACSHSGMSQKGRC 426
Query: 438 IRK 440
+ K
Sbjct: 427 LFK 429
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 55/222 (24%)
Query: 138 VYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
VY+ +I Y+++ D A ++F M ++V+SWNSMI C A +LF +M
Sbjct: 42 VYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP- 100
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
E V
Sbjct: 101 ---------------------------------------------------ERSVVSWTT 109
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSAT 316
+I+ + + G I +++ +F KM + D+ +WNS++ Y +G+ ++ L+LF M + + +
Sbjct: 110 MINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCR-NVIS 168
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLE-NHGVVPQLDHYACMV 357
+ S++ G +E +F M+ V P Y C++
Sbjct: 169 WTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVI 210
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA 315
++I + R I ++ VFDK+++ D+ + ++ YA + + ALQLF M V+ D
Sbjct: 16 SMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK-DVV 74
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
++ S++ C + K+F M E V + M++ + G+I AE L +
Sbjct: 75 SWNSMIKGCFDCADLTMARKLFDEMPERSVV-----SWTTMINGFLQFGKIEVAEGLFYK 129
Query: 376 MPMEPDSVIWSVLLGSC 392
MP + S++ G C
Sbjct: 130 MPFRDIAAWNSMIYGYC 146
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 332/541 (61%), Gaps = 26/541 (4%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLI- 115
+D R +F+ MP++++VSW +I+G A++G E + + P+ F+L+SVL
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 116 ---SCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
+ D GK +H +++ LDA VYVA++LI+MY+K + ++++VF + R+ ISW
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
NS+IA C LF +E L FRQ+ + P +FS ++ ACA L T
Sbjct: 370 NSIIAG---CVQNG----LF------DEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTT 416
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+H I + GF+++ IA++L+ YA+CG+I ++Q+FD+M D+VSW +++
Sbjct: 417 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMG 476
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
ALHG A +A++LF M ++P+ F+++L+ACSHAGLV E K F+SM + G+ P
Sbjct: 477 CALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAP 536
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
++HYA + DLLGR GR+ EA I MP+ P +W+ LL +CR H +AE A ++
Sbjct: 537 GVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRI 596
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
+++P ++ ++ ++NIY + + +A R ++ + +RK P SWIE+ N+V+ F +G
Sbjct: 597 LEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAG 656
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+ HP E I + +E L+ ++ GYVP+TS HD+EEE K+ + HSE+LA+VF I+
Sbjct: 657 DESHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGII 716
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
N + + IR+ KN+R+C DCH K S ++G+EIVVRD++RFHHFK+ CSC DY
Sbjct: 717 NTPA----GTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDY 772
Query: 589 W 589
W
Sbjct: 773 W 773
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 149/311 (47%), Gaps = 55/311 (17%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+++V + LI+MYAK + D+ +F + +R+ +SW ++I+G Q+G +E + F +L
Sbjct: 334 EVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQML 393
Query: 101 Q-YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
P +S +S++ +C +L GK +H + D ++++A++L++MY+K C +
Sbjct: 394 MAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAK-CGNI 452
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A ++F+ M R+++SW +MI C L A+ +A+ LF Q++ EG+
Sbjct: 453 RTARQIFDRMRLRDMVSWTAMIM---GCALHGHAL----------DAIELFEQMKTEGIE 499
Query: 214 PDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
P++ F VL AC AGLV E A+ S++L
Sbjct: 500 PNYVAFMAVLTACSHAGLVDE---------------------------AWKYFNSMTLDF 532
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQ 331
+ + ++ VS G+ +EA M + P + + +LLSAC V
Sbjct: 533 GIAPGVEHYAAVS-----DLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVD 587
Query: 332 EGNKVFHSMLE 342
KV + +LE
Sbjct: 588 MAEKVANRILE 598
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 176/433 (40%), Gaps = 89/433 (20%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFS 109
+Y+ L D+ LF+ + ++W ++I Y HG + F +L +P+
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 110 LASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK--------------- 150
SVL +C L G+ +H ++ LD +Y NAL+NMYSK
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 151 SCADEAWKVFENMEFRNVISWN-----SMIAAF------RACKLEAQAIELFAKMKN--- 196
DE + ++ +V+ N S I AF R+ + EAQ +E+ K ++
Sbjct: 171 QVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYR 230
Query: 197 EEEALFLFRQLQ----------------------------------REG----------- 211
E EA L +Q++ R G
Sbjct: 231 EMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVRE 290
Query: 212 -----MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+ PD T S VL A V +H + G + + +A++LI YA+C
Sbjct: 291 MGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTR 350
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ S +VF +T D +SWNSI+ +G E L+ F M ++P S +F S++ A
Sbjct: 351 VVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPA 410
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C+H + G K H + +G + + +VD+ + G I A ++ M + D V
Sbjct: 411 CAHLTTLHLG-KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMV 468
Query: 384 IWSVLLGSCRKHG 396
W+ ++ C HG
Sbjct: 469 SWTAMIMGCALHG 481
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ ACA + QLH ++ N +E ++F+ + L++MYAK G + AR +FD
Sbjct: 404 FSSIMPACAHLTTLHLGKQLHGYITRNGFDE--NIFIASSLVDMYAKCGNIRTARQIFDR 461
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLVH 126
M R++VSWTA+I G A HG+A + LF + + PN + +VL +C H LV
Sbjct: 462 MRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACS--HAGLV- 518
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEF 165
DEAWK F +M
Sbjct: 519 ---------------------------DEAWKYFNSMTL 530
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/578 (38%), Positives = 325/578 (56%), Gaps = 35/578 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
F+ LI Y + G L AR + D M ++ ++W A+ISGY HG E+ LF + L
Sbjct: 224 FIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLL 283
Query: 102 YFFPNEFSLASVLISCD----YLHGKLVHALALKFSL----DAHVYVANALINMYSK-SC 152
+E + SV+ +C +L GK VHA LK L D + V N LI +Y K
Sbjct: 284 GVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGK 343
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--------------- 197
D A K+F M +++I+WN++++ + +A FA+M +
Sbjct: 344 VDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQN 403
Query: 198 ---EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
E+AL LF Q++ +G P+ F+ + AC+ L + +H+ I G + +
Sbjct: 404 GFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVG 463
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
NA+I YARCG + ++ +F M + D VSWNS++ A HG +A++L+ M +
Sbjct: 464 NAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGIL 523
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
PD TF+++LSACSHAGLV+EGN+ F+SMLEN+G+ P DHYA M+DL R G+ +A+
Sbjct: 524 PDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKN 583
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
+I MP E + IW LL CR HG L AA KL +L P +V +SN+Y G
Sbjct: 584 VIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGR 643
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG 491
+N RK M+ V+K P SW E+EN+VH F HP+ +I+ LE+L ++K
Sbjct: 644 WNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKK 703
Query: 492 MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
+GY+P+T LHD+E EHKE L HSEKLA+ F +M + + +R+ KN+RIC D
Sbjct: 704 IGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMK----LPQGATVRVFKNLRICGD 759
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CHN +K S ++G+EIVVRD RFHHFK+ CSC +YW
Sbjct: 760 CHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 156/332 (46%), Gaps = 56/332 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQD--LFVTNHLINMYAKFGYLDDARHLF 65
Y ++ ACA G Q+H +++ N N +D L V N LI +Y K+G +D AR +F
Sbjct: 292 YTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIF 351
Query: 66 DEMP-------------------------------KRNVVSWTALISGYAQHGNAEECFR 94
EMP ++N+++WT +ISG AQ+G E+ +
Sbjct: 352 YEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALK 411
Query: 95 LFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYS 149
LF + L + PN+++ A + +C L +G+ +HA + D+ + V NA+I MY+
Sbjct: 412 LFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYA 471
Query: 150 KSCADEAWK-VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
+ EA + +F M F + +SWNSMIAA +AIE L+ Q+
Sbjct: 472 RCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIE-------------LYEQML 518
Query: 209 REGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+EG+ PD TF VL AC AGLV E + +S++ YG +I + R G
Sbjct: 519 KEGILPDRRTFLTVLSACSHAGLVEEGN-RYFNSMLENYGIAPGEDHYARMIDLFCRAGK 577
Query: 267 ISLSKQVFDKMTYHDLVS-WNSILKAYALHGQ 297
S +K V D M + W ++L HG
Sbjct: 578 FSDAKNVIDSMPFEARAPIWEALLAGCRTHGN 609
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 196/458 (42%), Gaps = 90/458 (19%)
Query: 35 FPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEE 91
F PQ D+ LI Y+ G L AR +F+E P R+ V + A+I+GY+ +
Sbjct: 71 FDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHS 130
Query: 92 CFRLFCSL-LQYFFPNEFSLASVLIS----------CDYLHGKLVHALALKFSLDAHVYV 140
LF ++ F P++F+ ASVL + C +HG +V KF ++ V
Sbjct: 131 AIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVV-----KFGIEIFPAV 185
Query: 141 ANALINMYSKSCAD-----------EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
NAL+++Y K CA A K+F+ M RN W ++I + A E
Sbjct: 186 LNALLSVYVK-CASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGARE 244
Query: 190 LFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
+ M + E+AL LFR+++ G+ D T++ V+ ACA
Sbjct: 245 ILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGF 304
Query: 232 ERHASAVHSLIAKYGFEDDT----VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
VH+ I K D + N LI Y + G + ++++F +M D+++WN+
Sbjct: 305 FLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNT 364
Query: 288 ILKAY-------------------------------ALHGQAKEALQLFSNMNV---QPD 313
+L Y A +G ++AL+LF+ M + +P+
Sbjct: 365 LLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPN 424
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
F ++ACS G ++ G ++ H+ + + G L M+ + R G + A +
Sbjct: 425 DYAFAGAITACSVLGALENGRQL-HAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMF 483
Query: 374 REMPMEPDSVIWSVLLGSCRKHGE-TRLAELAATKLKQ 410
MP D V W+ ++ + +HG + EL LK+
Sbjct: 484 LTMPF-VDPVSWNSMIAALGQHGHGVKAIELYEQMLKE 520
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 146/339 (43%), Gaps = 76/339 (22%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
+HG H +A F L H+ N LI++Y KS A K+F+ + +VI+ ++I A+
Sbjct: 35 VHG---HVIASGFKLRGHI--VNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAY 89
Query: 179 RACKLEAQAIELF--------------------AKMKNEEEALFLFRQLQREGMAPDWCT 218
A A E+F + M + A+ LFR ++ PD T
Sbjct: 90 SALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFT 149
Query: 219 FSIVLKACAGLV-TERHASAVHSLIAKYGFEDDTVIANALIHAYARC------------- 264
F+ VL A + ER +H + K+G E + NAL+ Y +C
Sbjct: 150 FASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMA 209
Query: 265 ---------------------------GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
G ++ ++++ D MT ++WN+++ Y HG
Sbjct: 210 SARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGL 269
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
++AL LF M VQ D +T+ S++SAC+ G G +V +L+N + P D
Sbjct: 270 FEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNE-LNPDRDFLL 328
Query: 355 ----CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++ L + G++ A K+ EMP++ D + W+ LL
Sbjct: 329 SVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLL 366
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 59/259 (22%)
Query: 235 ASAVHSLIAKYGF-------------------------------EDDTVIANALIHAYAR 263
A VH + GF + D + LI AY+
Sbjct: 32 ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91
Query: 264 CGSISLSKQVFDK--MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
G++ +++++F++ + D V +N+++ Y+ A++LF M N QPD TF
Sbjct: 92 LGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFA 151
Query: 319 SLLSACS------------HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
S+LSA + H +V+ G ++F ++L V + C L +
Sbjct: 152 SVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSV----YVKCASSPLVSSSSL 207
Query: 367 L-EAEKLIREMPMEPDSVIWSVLLGSCRKHGE-TRLAELAATKLKQLEPGDSLGFVQMSN 424
+ A KL EMP + + IW+ L+ ++G+ T E+ T +Q PG + + M +
Sbjct: 208 MASARKLFDEMP-KRNEFIWTTLITGYVRNGDLTGAREILDTMTEQ--PG--IAWNAMIS 262
Query: 425 IYCLSGSFNKARLIRKEMK 443
Y G F A + ++M+
Sbjct: 263 GYLHHGLFEDALTLFRKMR 281
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/610 (35%), Positives = 335/610 (54%), Gaps = 35/610 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ LF ++ QLH H++ + ++FV L+ MY G LD AR +FD
Sbjct: 142 FPFLFKGFTRDIALEYGRQLHGHVLKH--GLQYNVFVHTALVQMYLLCGQLDTARGVFDV 199
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHG 122
PK +V++W +IS Y + G EE RLF + + P +L VL +C D G
Sbjct: 200 CPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG 259
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
K VH+ +++++ + NA+I+MY+ C D A +F +M R++ISW ++++ F
Sbjct: 260 KKVHSYVKNCKVESNLVLENAMIDMYA-DCGEMDSALGIFRSMNNRDIISWTTIVSGFTN 318
Query: 181 CKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIV 222
A F KM ++ EAL LFR +Q + PD T V
Sbjct: 319 LGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSV 378
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L ACA L + + I + ++D + NALI Y +CG + ++ +F +M+ D
Sbjct: 379 LTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDK 438
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+W +++ A++G ++AL +FSNM ++ PD T++ +LSAC+H GLV +G K F
Sbjct: 439 FTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLR 498
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
M HG+ P + HY C+VDLL R GR+ EA ++I MP++ +S++W LL CR + E+
Sbjct: 499 MTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESD 558
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
+AE+ ++ +LEP + +V + NIY +N R +R+ M ++K PG S IE+
Sbjct: 559 MAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMN 618
Query: 460 NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSE 519
RVHEF +G + HPQ + I KL+++ LK GY P+ S DI EE KE ++ HSE
Sbjct: 619 GRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSE 678
Query: 520 KLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
KLA+ F ++N IRI KN+R+C+DCHN KL S + +E++VRD RFHHFK
Sbjct: 679 KLAIAFGLINSPP----GVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFK 734
Query: 580 DRICSCNDYW 589
+CSC DYW
Sbjct: 735 HGLCSCKDYW 744
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 218/484 (45%), Gaps = 73/484 (15%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPN-EP--QDLFVTNHLINMYAKFGY 57
F T +L C ++ Q Q+H I N P Q+ +T + Y F Y
Sbjct: 35 FSPPTHPLISLLETCE---SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 91
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSL 110
AR LFDE+P+ N+ W +I GY++ + L+ +L +Y FP F
Sbjct: 92 ---ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 148
Query: 111 ASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNV 168
+ I+ +Y G+ +H LK L +V+V AL+ MY C D A VF+ +V
Sbjct: 149 FTRDIALEY--GRQLHGHVLKHGLQYNVFVHTALVQMYL-LCGQLDTARGVFDVCPKADV 205
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
I+WN +I+A+ K+ EE+ LF ++ + + P T +VL AC+
Sbjct: 206 ITWNMIISAYN-------------KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 252
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC------------------------ 264
L R VHS + E + V+ NA+I YA C
Sbjct: 253 LKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTI 312
Query: 265 -------GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
G I +++ FDKM D VSW +++ Y + KEAL+LF NM NV+PD
Sbjct: 313 VSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 372
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T VS+L+AC+H G ++ G + + ++ + + L ++D+ + G + +AE + R
Sbjct: 373 FTMVSVLTACAHLGALELGEWI-RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFR 431
Query: 375 EMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
EM + D W+ ++ + HGE L ++ + LK D + ++ + + +G
Sbjct: 432 EMS-QRDKFTWTAMIVGLAVNGHGEKAL-DMFSNMLKASILPDEITYIGVLSACTHTGLV 489
Query: 433 NKAR 436
+K R
Sbjct: 490 DKGR 493
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 162/361 (44%), Gaps = 31/361 (8%)
Query: 98 SLLQYFFPNEFSLASVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE- 155
S L+ F P L S+L +C+ + + VH A+K L+A+ + N ++ C E
Sbjct: 30 SALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTF---CCTHEY 86
Query: 156 -----AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A ++F+ + N+ WN+MI + + L+ +M R
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM-------------LRR 133
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ PD TF + K + + +H + K+G + + + AL+ Y CG + +
Sbjct: 134 GVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTA 193
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+ VFD D+++WN I+ AY G+ +E+ +LF M V P + T V +LSACS
Sbjct: 194 RGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKL 253
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
++ G KV HS ++N V L M+D+ G + A + R M D + W+
Sbjct: 254 KDLRTGKKV-HSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTT 311
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
++ GE ++A ++ D + + M + Y S F +A + + M+ + V
Sbjct: 312 IVSGFTNLGEI---DVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV 368
Query: 448 R 448
+
Sbjct: 369 K 369
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 338/562 (60%), Gaps = 32/562 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+LFV ++L +MY+K G L +A +FD+MP+++ V+WTA+I GYA++G+ E F +
Sbjct: 75 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 134
Query: 101 --------QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
Q+ F + S + L D K +H K + V V NALI+MY+KS
Sbjct: 135 REGLVGADQHVFCSVLSASGGLK--DGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSM 192
Query: 153 -ADEAWKVFE-NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ A +V + + NV+S SMI + +E +E EAL ++ +L+R+
Sbjct: 193 DVESASRVLKIDPGGWNVVSGTSMIDGY----IETDCVE---------EALVIYVELRRQ 239
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ P+ TFS ++K CA + +H+ + K D+ + + L+ Y +CG ISLS
Sbjct: 240 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 299
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
Q+F+++ Y ++WN+++ +A HG +EA+Q F M ++P+ FVSLL+ACSHA
Sbjct: 300 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 359
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV EG K F+SM E HG+ P+ +HY+C++D GR GR+ EA K I EMP++P++ W
Sbjct: 360 GLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCS 419
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LLG+CR G L E+AA L +LEPG++ V +S IY G + + +RK M+ SR+
Sbjct: 420 LLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRI 479
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG SW++ + H F S HPQ++ I++KLEEL ++K GY+P+TS ++E+
Sbjct: 480 KKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLED 539
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
KE L +HSE++A+ FA++ S+ + +I + KN+RIC+DCH K + ++I
Sbjct: 540 IAKERILRYHSERIAVAFALI---SMPATKPII-VKKNLRICIDCHTAFKFICKVERRDI 595
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+VRD++RFHHF + CSC DYW
Sbjct: 596 IVRDNSRFHHFVNGRCSCGDYW 617
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 171/346 (49%), Gaps = 28/346 (8%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKL-- 124
MP+RN VSWT L+SG +Q+ + F ++ + P F+L+S + L L
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 125 --VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H + ++ D ++VA+ L +MYSK EA +VF+ M ++ ++W +MI
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDG---- 116
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGM-APDWCTFSIVLKACAGLVTERHASAVHS 240
+AK + E A+ FR ++REG+ D F VL A GL + ++H
Sbjct: 117 ---------YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHC 167
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVF--DKMTYHDLVSWNSILKAYALHGQA 298
+ K GFE + + NALI YA+ + + +V D + ++VS S++ Y
Sbjct: 168 CVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW-NVVSGTSMIDGYIETDCV 226
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL ++ + V+P+ TF S++ C+ L+++G ++ H+ + ++ +
Sbjct: 227 EEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL-HAQVIKTDLIRDSFVGST 285
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+VD+ G+ G I + +L E+ D + W+ ++ +HG R A
Sbjct: 286 LVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHGHGREA 330
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ CA+ ++Q QLH +I + +D FV + L++MY K G + + LF+E
Sbjct: 248 FSSMIKGCAMQALLEQGAQLHAQVIKT--DLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 305
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV- 125
+ R ++W A+I+ +AQHG+ E + F ++ PN + S+L +C H LV
Sbjct: 306 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS--HAGLVD 363
Query: 126 HALALKFSL-DAHVYVA-----NALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAA 177
L +S+ +AH + +I+ Y ++ DEA+K M + N W S++ A
Sbjct: 364 EGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 423
Query: 178 FR 179
R
Sbjct: 424 CR 425
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/610 (36%), Positives = 348/610 (57%), Gaps = 45/610 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---------- 55
++ +L A L + K A LH + DL++ N LIN YAKF
Sbjct: 111 HVFPSLLKASTLLKHHKLAHSLHACTVR--LGLDSDLYIANALINTYAKFHNAGKVFDVF 168
Query: 56 -----GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEF 108
+D + +FD MP R+VVSW +I+G+AQ+G E + + + P+ F
Sbjct: 169 PKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSF 228
Query: 109 SLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENM 163
+L+S+L D GK +H A++ D V++ ++LI+MY+K E + + F +
Sbjct: 229 TLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYIL 288
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
++ ISWNS+IA C + + L FR++ +E + P +FS V+
Sbjct: 289 PRKDAISWNSIIAG---CVQNGEF----------DRGLGFFRRMLKENVKPMAVSFSSVI 335
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
ACA L +H I + GF+D+ IA++L+ YA+CG+I +++ VFD++ D+V
Sbjct: 336 PACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMV 395
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+W +I+ A+HG A +A+ LF NM V+P F+++L+ACSHAGLV EG + F+SM
Sbjct: 396 AWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSM 455
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM-PMEPDSVIWSVLLGSCRKHGETR 399
+ G+ P L+HYA + DLLGR GR+ EA I M ++P +WS+LL +CR H
Sbjct: 456 ERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVE 515
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
LAE KL ++ + +V MSNIY + + A +R M+ ++K P SWIE+
Sbjct: 516 LAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVG 575
Query: 460 NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSE 519
N+VH F +G K HP + I K L+ L+ Q++ GYV +T+ LHD++EE K E L++HSE
Sbjct: 576 NQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSE 635
Query: 520 KLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
+LA+ + I++ + + IR++KNIR+C DCH +K + ++G+EI VRD++RFHHFK
Sbjct: 636 RLAIAYGIISTTA----GTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFK 691
Query: 580 DRICSCNDYW 589
+ CSC DYW
Sbjct: 692 NGSCSCGDYW 701
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
F ++ + P+ F +LKA L + A ++H+ + G + D IANALI+ YA+
Sbjct: 98 FNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAK 157
Query: 264 C---------------GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
I K+VFD M D+VSWN+++ +A +G EAL + M
Sbjct: 158 FHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREM 217
Query: 309 N----VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
++PDS T S+L + V +G ++ H +G + + ++D+ +
Sbjct: 218 GKNGKLKPDSFTLSSILPIFAEHVDVNKGKEI-HGYAVRNGFDGDVFIGSSLIDMYAKCN 276
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
R+ + + +P + D++ W+ ++ C ++GE
Sbjct: 277 RLECSLRAFYILPRK-DAISWNSIIAGCVQNGE 308
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 325/563 (57%), Gaps = 32/563 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +I Y G ++D LF EMP RNV+SWT++I G QHG +EE LF +
Sbjct: 117 RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQM 176
Query: 100 LQYFF---PNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+ P + V+ +C G +HA K Y++ ALI Y+ +C
Sbjct: 177 MGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA-NC 235
Query: 153 A--DEAWKVFENMEFRNVISWNSMIAAFRA-CKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+++ +VF NV+ W +++ + CK E+AL +F ++ R
Sbjct: 236 KQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK--------------HEDALKVFGEMMR 281
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
EG+ P+ +F+ L +C GL +H+ K G E D + N+LI Y RCG+++
Sbjct: 282 EGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLND 341
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+F +++ ++VSWNS++ A HG AL F+ M V+PD TF LLSACSH
Sbjct: 342 GVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSH 401
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+G+ Q+G +F EN +LDHYACMVD+LGR G++ EAE+LIR MP++ +S++W
Sbjct: 402 SGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWL 461
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
VLL +C H + +AE AA + LEP S +V +SN+Y + ++ IR+EMK
Sbjct: 462 VLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRG 521
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
+ K PG SWI I+ +EF SG + HP + I++KLE L G+LK +GYVP+ ALHD+E
Sbjct: 522 ITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVE 581
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
+E KE L +HSE+LA+ F +++ E S I +MKN+R+C DCH+ +KL + ++ ++
Sbjct: 582 DEQKEVMLSYHSERLAIGFGLIST----VEGSTITVMKNLRVCGDCHSAIKLIAKIVRRK 637
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+VRDS RFHHF D CSC DYW
Sbjct: 638 IIVRDSTRFHHFMDGRCSCGDYW 660
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 181/423 (42%), Gaps = 63/423 (14%)
Query: 29 EHMINNFPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG 87
+H + F P +D+ N +I L AR LFDEMP+R+VVSWT +I+G+ Q G
Sbjct: 43 DHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFG 102
Query: 88 NAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINM 147
E LF Y P + N++I
Sbjct: 103 KIEVAEGLF-----YKMPFR-----------------------------DIAAWNSMI-- 126
Query: 148 YSKSC---ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
Y C ++ ++F+ M RNVISW SMI + EEAL LF
Sbjct: 127 YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLD-------------QHGRSEEALGLF 173
Query: 205 RQLQREG--MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
RQ+ G + P T+ V+ ACA +H+ + K G+ D I+ ALI YA
Sbjct: 174 RQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA 233
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
C + S +VF + ++V W +++ Y L+ + ++AL++F M V P+ ++F S
Sbjct: 234 NCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTS 293
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
L++C + G ++ H+ G+ + ++ + R G + + + + + +
Sbjct: 294 ALNSCCGLEALDWGREI-HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-K 351
Query: 380 PDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
+ V W+ ++ C +H G LA +EP D + F + + SG K R
Sbjct: 352 KNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP-DEITFTGLLSACSHSGMSQKGRC 410
Query: 438 IRK 440
+ K
Sbjct: 411 LFK 413
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 55/222 (24%)
Query: 138 VYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
VY+ +I Y+++ D A ++F M ++V+SWNSMI C A +LF +M
Sbjct: 26 VYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP- 84
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
E V
Sbjct: 85 ---------------------------------------------------ERSVVSWTT 93
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSAT 316
+I+ + + G I +++ +F KM + D+ +WNS++ Y +G+ ++ L+LF M + + +
Sbjct: 94 MINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCR-NVIS 152
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLE-NHGVVPQLDHYACMV 357
+ S++ G +E +F M+ V P Y C++
Sbjct: 153 WTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVI 194
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSAT 316
+I + R I ++ VFDK+++ D+ + ++ YA + + ALQLF M V+ D +
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK-DVVS 59
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
+ S++ C + K+F M E V + M++ + G+I AE L +M
Sbjct: 60 WNSMIKGCFDCADLTMARKLFDEMPERSVV-----SWTTMINGFLQFGKIEVAEGLFYKM 114
Query: 377 PMEPDSVIWSVLLGSC 392
P + S++ G C
Sbjct: 115 PFRDIAAWNSMIYGYC 130
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 331/559 (59%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D++V LI++Y+K G R LFD++ + +++S+ A+ISGY + E LF LL
Sbjct: 248 DVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL 307
Query: 101 ----QYFFPNEFSLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ L V + ++L +L+ L+LK + V+ AL +Y + +
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQ 367
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A ++F+ +++ SWN+MI+ + L +AI LF +M + ++P
Sbjct: 368 FARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ--------------LSP 413
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T + +L ACA L VH LI E + ++ AL+ YA+CGSI ++Q+F
Sbjct: 414 NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF 473
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M ++V+WN+++ Y LHG KEAL+LF M + P TF+S+L ACSH+GLV
Sbjct: 474 DLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVS 533
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EGN++FHSM N+G P +HYACMVD+LGR G++ A + I MP+EP +W LLG+
Sbjct: 534 EGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGA 593
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C H T +A +A+ +L QL+P + +V +SNIY +F KA +R+ +K ++ K P
Sbjct: 594 CMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTP 653
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET-SLALHDIEEEHK 510
G + IEI+++ + F SG + HPQ AIF+ LE+L G+++ GY ET + ALHD+E+E K
Sbjct: 654 GCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEK 713
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E + HSEKLA+ F +++ + + IRI+KN+R+C+DCH K S + + IVVR
Sbjct: 714 ELMVNVHSEKLAIAFGLIS----TKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVR 769
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFHHFK+ ICSC DYW
Sbjct: 770 DANRFHHFKNGICSCGDYW 788
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 177/384 (46%), Gaps = 26/384 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL L + + G + R LF+++ K ++ + LI G++ +G + L+ L
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 101 QY--FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ P+ F+ A + + L G L+HA ++ + ++++V +A++++Y K + A
Sbjct: 105 KKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ A KVF+ M R+ + WN+MI+ F +I +F M + G++
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDV-------------GLS 211
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D T + VL A A L R + L +K G D + LI Y++CG + +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD++ DL+S+N+++ Y + + + A+ LF + + +S+T V L+ +
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
Q +++ ++ G++ Q + + R+ + A +L E P E W+ ++
Sbjct: 332 QL-SRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMIS 389
Query: 391 SCRKHGET-RLAELAATKLKQLEP 413
++G T R L + QL P
Sbjct: 390 GYTQNGLTDRAISLFQEMMPQLSP 413
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
+G D L H + G+++ +Q+F+K++ DL +N +++ ++ +G K ++ L
Sbjct: 40 HGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFL 99
Query: 305 FSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVF---HSMLENHGVVPQLDHYACMV 357
++++ N++PD+ T+ +SA S L E V HS+++ GV L + +V
Sbjct: 100 YTHLRKKTNLRPDNFTYAFAISAASR--LEDERVGVLLHAHSIVD--GVASNLFVGSAIV 155
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
DL + R A K+ MP E D+V+W+ ++
Sbjct: 156 DLYFKFTRAELARKVFDVMP-ERDTVLWNTMI 186
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/592 (36%), Positives = 347/592 (58%), Gaps = 29/592 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A L A + K Q+H ++ N ++FV N L++ Y+K +D+ LF E
Sbjct: 244 FAALLSAAVGLDDTKFGQQVHGFVLKT--NFVWNVFVGNALLDYYSKHDQVDEVGKLFYE 301
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVL-ISCDYLH---G 122
MP+ + +S+ +I+ YA +G +E F LF L F +F A++L I+ L+ G
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMG 361
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H A+ + V NAL++MY+K D EA K+F+N+ ++ + W +MI+A+
Sbjct: 362 RQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAY--- 418
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ EE + +F ++R G+ D TF+ +L+ACA L + +HSL
Sbjct: 419 ----------VQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSL 468
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + GF + +AL+ YA+CG ++ + + F +M + VSWN+++ AYA +G
Sbjct: 469 LIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGT 528
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L F M +PDS +F+S+LSACSH G V+E F+SM + + V P+ +HY MVD
Sbjct: 529 LNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVD 588
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSL 417
+L R GR EAEKL+ EMP EP ++WS +L SCR H LA+ AA +L +E D+
Sbjct: 589 VLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAA 648
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
++ MSNIY ++G ++ ++K M+ VRK P SW+EI+++ H F++ K HP+ +
Sbjct: 649 PYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKK 708
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +K+ L +++ GY P+T+ ALHD++E K E L +HSE+ A+ FA+MN +
Sbjct: 709 ILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMN----TPDG 764
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I +MKN+R C DCH +K+ S ++ +EI+VRDS+RFHHFKD +CSC DYW
Sbjct: 765 SPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 188/398 (47%), Gaps = 50/398 (12%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A Q+ + M ++ N +I+ + KFG L AR LFD M +R VSWT
Sbjct: 57 GDLVHAHQVFDQM------PAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV----HALALKFS 133
LI GY Q ++E FRL+ + + P+ +L ++L L K V H +K
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 134 LDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ ++ V N+L++ Y K+ C A ++F++M ++ +++NS++ + L +AIELF
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFL 230
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
++ N G+ P TF+ +L A GL + VH + K F +
Sbjct: 231 ELHNS-------------GIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN--- 309
+ NAL+ Y++ + ++F +M D +S+N ++ +YA +GQ KE+ LF +
Sbjct: 278 VGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTR 337
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKV----------FHSMLENHGVVPQLDHYACMVDL 359
F +LLS + + ++ G ++ F S +EN +VD+
Sbjct: 338 FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN-----------ALVDM 386
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ EA+K+ + + +V W+ ++ + + G+
Sbjct: 387 YAKCNGDKEAQKIFDNIACK-STVPWTAMISAYVQKGK 423
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 327/560 (58%), Gaps = 27/560 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D F+ + L++ Y G DA+ LFDEMP ++ +SW +L+SG+++ G+ C R+F ++
Sbjct: 84 RDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSRIGDLGNCLRVFYTM 143
Query: 100 L--QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
F NE +L SV+ +C + G +H A+K ++ V V NA INMY K C
Sbjct: 144 RYEMAFEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEVKVVNAFINMYGKFGC 203
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A+K+F + +N++SWNSM+A + + +A+ F M+ G+
Sbjct: 204 VDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMR-------------VNGL 250
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD T +L+AC L R A+H +I G ++ IA L++ Y++ G +++S +
Sbjct: 251 FPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNVSHK 310
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGL 329
VF +++ D V+ ++L YA+HG KEA++ F ++PD TF LLSACSH+GL
Sbjct: 311 VFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSHSGL 370
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V +G F M + + V PQLDHY+CMVDLLGR G + +A +LI+ MP+EP+S +W LL
Sbjct: 371 VMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGALL 430
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G+CR + L + AA L L P D ++ +SNIY +G ++ A +R MK +
Sbjct: 431 GACRVYRNINLGKEAAENLIALNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKTKVFIR 490
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G S+IE N++H F HP + I +KLEE++ ++K +G+V ET LHD++EE
Sbjct: 491 NAGCSFIEHGNKIHRFVVDDYSHPDSDKIHRKLEEIMRKIKEVGFVSETESILHDVDEEV 550
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K + + HSEK+AL F ++ + + I+KN+RIC+DCHN K S + + I++
Sbjct: 551 KTDMINKHSEKIALAFGLL----VSNADMPLVIIKNLRICLDCHNTAKFVSLIEKRTIII 606
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RDS RFHHF D +CSC DYW
Sbjct: 607 RDSKRFHHFSDGLCSCADYW 626
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 331/559 (59%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D++V LI++Y+K G R LFD++ + +++S+ A+ISGY + E LF LL
Sbjct: 248 DVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL 307
Query: 101 ----QYFFPNEFSLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ L V + ++L +L+ L+LK + V+ AL +Y + +
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQ 367
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A ++F+ +++ SWN+MI+ + L +AI LF +M + ++P
Sbjct: 368 FARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ--------------LSP 413
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T + +L ACA L VH LI E + ++ AL+ YA+CGSI ++Q+F
Sbjct: 414 NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF 473
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M ++V+WN+++ Y LHG KEAL+LF M + P TF+S+L ACSH+GLV
Sbjct: 474 DLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVS 533
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EGN++FHSM N+G P +HYACMVD+LGR G++ A + I MP+EP +W LLG+
Sbjct: 534 EGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGA 593
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C H T +A +A+ +L QL+P + +V +SNIY +F KA +R+ +K ++ K P
Sbjct: 594 CMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTP 653
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET-SLALHDIEEEHK 510
G + IEI+++ + F SG + HPQ AIF+ LE+L G+++ GY ET + ALHD+E+E K
Sbjct: 654 GCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEK 713
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E + HSEKLA+ F +++ + + IRI+KN+R+C+DCH K S + + IVVR
Sbjct: 714 ELMVNVHSEKLAIAFGLIS----TKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVR 769
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFHHFK+ ICSC DYW
Sbjct: 770 DANRFHHFKNGICSCGDYW 788
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 177/384 (46%), Gaps = 26/384 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL L + + G + R LF+++ K ++ + LI G++ +G + L+ L
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 101 QY--FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ P+ F+ A + + L G L+HA ++ + ++++V +A++++Y K + A
Sbjct: 105 KXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ A KVF+ M R+ + WN+MI+ F +I +F M + G++
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDV-------------GLS 211
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D T + VL A A L R + L +K G D + LI Y++CG + +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD++ DL+S+N+++ Y + + + A+ LF + + +S+T V L+ +
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
Q +++ ++ G++ Q + + R+ + A +L E P E W+ ++
Sbjct: 332 QL-SRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMIS 389
Query: 391 SCRKHGET-RLAELAATKLKQLEP 413
++G T R L + QL P
Sbjct: 390 GYTQNGLTDRAISLFQEMMPQLSP 413
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
+G D L H + G+++ +Q+F+K++ DL +N +++ ++ +G K ++ L
Sbjct: 40 HGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFL 99
Query: 305 FSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVF---HSMLENHGVVPQLDHYACMV 357
++++ N++PD+ T+ +SA S L E V HS+++ GV L + +V
Sbjct: 100 YTHLRKXTNLRPDNFTYAFAISAASR--LEDERVGVLLHAHSIVD--GVASNLFVGSAIV 155
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
DL + R A K+ MP E D+V+W+ ++
Sbjct: 156 DLYFKFTRAELARKVFDVMP-ERDTVLWNTMI 186
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 338/562 (60%), Gaps = 32/562 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+LFV ++L +MY+K G L +A +FD+MP+++ V+WTA+I GYA++G+ E F +
Sbjct: 156 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 215
Query: 101 --------QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
Q+ F + S + L D K +H K + V V NALI+MY+KS
Sbjct: 216 REGLVGADQHVFCSVLSASGGLK--DGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSM 273
Query: 153 -ADEAWKVFE-NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ A +V + + NV+S SMI + +E +E EAL ++ +L+R+
Sbjct: 274 DVESASRVLKIDPGGWNVVSGTSMIDGY----IETDCVE---------EALVIYVELRRQ 320
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ P+ TFS ++K CA + +H+ + K D+ + + L+ Y +CG ISLS
Sbjct: 321 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 380
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
Q+F+++ Y ++WN+++ +A HG +EA+Q F M ++P+ FVSLL+ACSHA
Sbjct: 381 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 440
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV EG K F+SM E HG+ P+ +HY+C++D GR GR+ EA K I EMP++P++ W
Sbjct: 441 GLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCS 500
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LLG+CR G L E+AA L +LEPG++ V +S IY G + + +RK M+ SR+
Sbjct: 501 LLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRI 560
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG SW++ + H F S HPQ++ I++KLEEL ++K GY+P+TS ++E+
Sbjct: 561 KKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLED 620
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
KE L +HSE++A+ FA++ S+ + +I + KN+RIC+DCH K + ++I
Sbjct: 621 IAKERILRYHSERIAVAFALI---SMPATKPII-VKKNLRICIDCHTAFKFICKVERRDI 676
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+VRD++RFHHF + CSC DYW
Sbjct: 677 IVRDNSRFHHFVNGRCSCGDYW 698
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 200/405 (49%), Gaps = 29/405 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+L +C G++++ LH ++ + F+ NHLI MY+ L A LF M
Sbjct: 24 ASLLQSCGRAGDLRRGRLLHARLVLS-GAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKL--- 124
P+RN VSWT L+SG +Q+ + F ++ + P F+L+S + L L
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142
Query: 125 -VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H + ++ D ++VA+ L +MYSK EA +VF+ M ++ ++W +M
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAM-------- 194
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGM-APDWCTFSIVLKACAGLVTERHASAVHSL 241
I+ +AK + E A+ FR ++REG+ D F VL A GL + ++H
Sbjct: 195 -----IDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCC 249
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVF--DKMTYHDLVSWNSILKAYALHGQAK 299
+ K GFE + + NALI YA+ + + +V D + ++VS S++ Y +
Sbjct: 250 VTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW-NVVSGTSMIDGYIETDCVE 308
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL ++ + V+P+ TF S++ C+ L+++G ++ H+ + ++ + +
Sbjct: 309 EALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL-HAQVIKTDLIRDSFVGSTL 367
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
VD+ G+ G I + +L E+ D + W+ ++ +HG R A
Sbjct: 368 VDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHGHGREA 411
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 146/295 (49%), Gaps = 35/295 (11%)
Query: 110 LASVLISC----DYLHGKLVHA-LALKFSLDAHVYVANALINMYSKSCAD--EAWKVFEN 162
LAS+L SC D G+L+HA L L + A ++AN LI MYS CAD A ++F
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH-CADLASALRLFAA 81
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
M RN +SW ++++ + A A+ FA M+ R G+AP S
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR-------------RAGVAPTRFALSSA 128
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
+A A L + +H + + GF+ + +A+ L Y++CG +S + +VFD+M D
Sbjct: 129 ARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDA 188
Query: 283 VSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEG--NKV 336
V+W +++ YA +G + A+ F +M V D F S+LSA +G +++G +K
Sbjct: 189 VAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKS 245
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
H + G ++ ++D+ + ++ E R + ++P W+V+ G+
Sbjct: 246 IHCCVTKAGFELEVAVRNALIDMYAKS---MDVESASRVLKIDPGG--WNVVSGT 295
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ CA+ ++Q QLH +I + +D FV + L++MY K G + + LF+E
Sbjct: 329 FSSMIKGCAMQALLEQGAQLHAQVIKT--DLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 386
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV- 125
+ R ++W A+I+ +AQHG+ E + F ++ PN + S+L +C H LV
Sbjct: 387 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS--HAGLVD 444
Query: 126 HALALKFSL-DAHVYVA-----NALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAA 177
L +S+ +AH + +I+ Y ++ DEA+K M + N W S++ A
Sbjct: 445 EGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 504
Query: 178 FR 179
R
Sbjct: 505 CR 506
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/616 (35%), Positives = 330/616 (53%), Gaps = 70/616 (11%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D FV + L++ Y +FG DAR + D MP R VV W+ALI+ +A HG+AE + L +
Sbjct: 53 RDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERM 112
Query: 100 L------------------------------------QYFFPNEFSLASVLISC----DY 119
+ F P+ ++ L + D
Sbjct: 113 RSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDV 172
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H +K VA ALI+MY K ADE +VF+ +V S N+++A
Sbjct: 173 AVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGL 232
Query: 179 RACKLEAQAIELF----------------------AKMKNEEEALFLFRQLQREGMAPDW 216
++A+ LF + + EA+ LFR++Q EG+ P+
Sbjct: 233 SRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNS 292
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T VL A A + H + H + GF D + +AL+ YA+CG + ++ +F+
Sbjct: 293 VTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEA 352
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEG 333
M Y ++VSWN+++ YA+HG+A+ A++LF +M +PD TF +L ACS AG +EG
Sbjct: 353 MPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEG 412
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
F+ M HG+ P+++HYACMV LLGR G++ +A +I +MP EPD IW LLGSCR
Sbjct: 413 RSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCR 472
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
HG LAE+AA L QLEP ++ +V +SNIY ++ +R MK ++K G
Sbjct: 473 VHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGC 532
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWIEI+N+VH +G HP AI +KL+ L +++ +G+ P T LHD+EE+ K++
Sbjct: 533 SWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDI 592
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ +++ + ++++KN+RIC DCH MK S +EI VRD+N
Sbjct: 593 LSVHSEKLAVALGLISTS----HGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTN 648
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFKD CSC DYW
Sbjct: 649 RFHHFKDGKCSCADYW 664
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 160/384 (41%), Gaps = 68/384 (17%)
Query: 14 ACALH-----GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+CAL G++ QLH +++ D V LI+MY K G D+ +FDE
Sbjct: 160 SCALSAVGDVGDVAVGEQLHGYVVK--AGCRLDACVATALIDMYGKCGRADEIVRVFDES 217
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL---------------------------- 100
+V S AL++G +++ E RLF +
Sbjct: 218 SHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAV 277
Query: 101 --------QYFFPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMY 148
+ PN ++ VL + +HG+ H +L+ +YV +AL++MY
Sbjct: 278 DLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMY 337
Query: 149 SKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
+K C +A +FE M +RNV+SWN+MI +A E A+ LFR
Sbjct: 338 AK-CGRVRDARMIFEAMPYRNVVSWNAMIGG-------------YAMHGEAENAVRLFRS 383
Query: 207 LQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
+Q PD TF+ VL AC AG TE S + + K+G ++ R
Sbjct: 384 MQSSKEKPDLVTFTCVLGACSQAGW-TEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRA 442
Query: 265 GSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
G + + + ++M + D W S+L + +HG A N+ ++P++A LLS
Sbjct: 443 GKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLS 502
Query: 323 ACSHAGLVQEGNKVFHSMLENHGV 346
+ + +G M++ G+
Sbjct: 503 NIYASKKMWDGVNRLRDMMKTVGL 526
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 140/358 (39%), Gaps = 64/358 (17%)
Query: 103 FFPNEFSLASVLISCDYLHGKLVHALALKF-SLDAHVYVANALINMYSKSCAD-EAWKVF 160
F P+ L S L SC L A + +VA++L++ Y + A +A V
Sbjct: 19 FPPDPRLLPSALKSCSALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSVL 78
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE----------------------E 198
+ M R V+ W+++IAA + A L +M+++
Sbjct: 79 DGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRAR 138
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+A+ ++ EG PD S L A + +H + K G D +A ALI
Sbjct: 139 DAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALI 198
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
Y +CG +VFD+ ++ D+ S N+++ + + Q EAL+LF ++ +
Sbjct: 199 DMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVV 258
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-------------------- 355
++ S+++ C G E +F M ++ G+ P C
Sbjct: 259 SWTSIVACCVQNGRDLEAVDLFREM-QSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCF 317
Query: 356 ---------------MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+VD+ + GR+ +A + MP + V W+ ++G HGE
Sbjct: 318 SLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAMIGGYAMHGEA 374
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/553 (38%), Positives = 333/553 (60%), Gaps = 30/553 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF--FP 105
LI++++K G ++ AR LF E+ K++++S A+ISG+ +G E+ RLF LL
Sbjct: 72 LISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVS 131
Query: 106 NEFSLASVLISCDYLHGKL---VHALALKFSLDAHVYVANALINMYSKSCADE---AWKV 159
+ + + + + H L +H +K + +H V+ AL +Y + +E A ++
Sbjct: 132 SSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR--LNEMIFARQL 189
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ + + SWN+MI+ L AI LF M Q+ + P+ T
Sbjct: 190 FDESAEKTLASWNAMISGCTQNGLTDAAISLFQTM-------------QKNNVNPNPVTV 236
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ +L ACA + VHSLI FE + ++ ALI YA+CGSI++++++FD M
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE 296
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
+ V+WN+++ Y LHG +EAL+LF +M +V+P TF+S+L ACSHAGLV+EG+ +
Sbjct: 297 KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGI 356
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
FH+M+ + G P +HYACMVD+LGR G++ +A + I+ MP+EP +W LLG+C H
Sbjct: 357 FHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHK 416
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+T LA +A+ KL +L+P + +V MSNIY + + +A +R+ K R+ K PG + I
Sbjct: 417 DTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLI 476
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
EI H F SG + HPQ +AI+ +L++L G++ G+ ET+ LHD+EEE KE +
Sbjct: 477 EIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKV 536
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+ F +++ + IRI+KN+R+C+DCHN+ K S + + IVVRD+NRFH
Sbjct: 537 HSEKLAIAFGLIST----EPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFH 592
Query: 577 HFKDRICSCNDYW 589
HFKD +CSC DYW
Sbjct: 593 HFKDGLCSCGDYW 605
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 27/329 (8%)
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-------GKLVHALALK 131
+ISG+ ++ E+ R+F ++ P F L +V+ + G + LA+K
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGP-RFDLTTVIAVLPAVAELQELKLGMQILCLAIK 59
Query: 132 FSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+HV + LI+++SK E A +F + +++IS N+MI+ F C E
Sbjct: 60 CGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGF-TCNGET----- 113
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
E+++ LF++L G T ++ + + +H K G
Sbjct: 114 -------EDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSH 166
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
+ ++ AL Y R + ++Q+FD+ L SWN+++ +G A+ LF M
Sbjct: 167 SSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQK 226
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
NV P+ T S+LSAC+ G + G V HS+++++ + ++D+ + G I
Sbjct: 227 NNVNPNPVTVTSILSACAQIGALSLGEWV-HSLIKSNRFESNVYVSTALIDMYAKCGSIT 285
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
A +L MP E + V W+ ++ HG
Sbjct: 286 VARELFDLMP-EKNEVTWNAMISGYGLHG 313
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G + +H + +N +++V+ LI+MYAK G + AR LFD M
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSN--RFESNVYVSTALIDMYAKCGSITVARELFDLM 294
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV 125
P++N V+W A+ISGY HG+ +E +LF +L P + SVL +C H LV
Sbjct: 295 PEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACS--HAGLV 350
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAP--DWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
I F K E+++ +F + G P D T VL A A L + + L K
Sbjct: 2 ISGFVKNSCFEDSIRVFGDMVL-GNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
GF + LI +++CG + +++ +F ++ DL+S N+++ + +G+ +++++LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+ + S+T V L+ S G N + H G+V + + R
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCI-HGFCVKLGIVSHSSVSTALTTVYCR 179
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ ++ A +L E E W+ ++ C ++G T A
Sbjct: 180 LNEMIFARQLFDE-SAEKTLASWNAMISGCTQNGLTDAA 217
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 332/580 (57%), Gaps = 32/580 (5%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G I++A+ N P +++ N LIN + + G LD A +FDEM +RNV +W A
Sbjct: 6 GEIQEAIAF----FNAMP--MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNA 59
Query: 79 LISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFS 133
++SG Q E LF + + F P+EF+L SVL C L GK VHA LK+
Sbjct: 60 MVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYG 119
Query: 134 LDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ ++ V ++L +MY KS + E KV + M RNV++WN++IA A
Sbjct: 120 YEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGN-------------A 166
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ + E L L+ ++ G+ PD T V+ + A L T +H+ K G
Sbjct: 167 QNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVA 226
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ ++LI Y++CG + S + + D V W+S++ AY HG+ +EA+ LF M
Sbjct: 227 VLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEG 286
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ + TF+SLL ACSH GL ++G F M+E +G+ P+L+HY C+VDLLGR G + EA
Sbjct: 287 LGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEA 346
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
E +IR MP+E D VIW LL +CR H +A A ++ +L P DS +V +SNI+ +
Sbjct: 347 EAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASA 406
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
+ +R M+ V+K PG+SW+E++NRV +F+ G K HP E I L+EL+ ++
Sbjct: 407 KRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEM 466
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRIC 549
K GYVP+T+ HD + E KE L +HSEKLA+ F +MN S IR+MKN+RIC
Sbjct: 467 KLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMN----IPPGSPIRVMKNLRIC 522
Query: 550 VDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +KL SD+ +EI+VRD++RFHHFK CSC DYW
Sbjct: 523 SDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/601 (37%), Positives = 345/601 (57%), Gaps = 37/601 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ I+ + A G++ A ++ + M +D+ N ++N YA+ G L++
Sbjct: 118 FVPGIVIWNRILGMYAKCGSLVDARKVFDEM------PERDVCSWNVMVNGYAEVGLLEE 171
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF---PNEFSLASVL--- 114
AR+LFDEMP+R+ SWTA+++GY + EE L+ SL+Q PN F+++S +
Sbjct: 172 ARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLY-SLMQRVPNSKPNIFTVSSAVAAA 230
Query: 115 --ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
I C GK +H ++ LD+ + ++L++MY K C DEA +F+ + ++V+SW
Sbjct: 231 AAIKC-IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSW 289
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
SMI + + K E LF +L P+ TFS VL ACA L T
Sbjct: 290 TSMI-------------DRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTT 336
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
E VH + + GF+ + +++LI Y +CG+I ++ V D DLVS S++
Sbjct: 337 EELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGG 396
Query: 292 YALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
YA +G+ EAL+ F +PD TFV++LSAC+HAGLV++G + F+S+ E H +
Sbjct: 397 YAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTH 456
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
DHY C+VDLL R GR + + ++ EMPM+P +W+ +LG C +G LAE AA +L
Sbjct: 457 TSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 516
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
++EP + + +V M+NIY +G + + +RK M+ + K PG SW EI+ + H F +
Sbjct: 517 FKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAA 576
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HP I + L EL ++K GYVP TSL LHD+E+E KEE L +HSEKLA+ FAI+
Sbjct: 577 DTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAIL 636
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ E + I++ KN+R CVDCH+ +K S + ++I +RDS RFH F++ CSC DY
Sbjct: 637 ST----EEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCSCRDY 692
Query: 589 W 589
W
Sbjct: 693 W 693
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 55/343 (16%)
Query: 146 NMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE--AQAIELFAKMKNEEEALFL 203
N+ S S A + K F + +F + + + R C+ +AI++ K EA+
Sbjct: 21 NLLSSSYASQ--KRFSDKKFFDSKLEDGGVVVERLCRANRFGEAIDVLCGQKLLREAV-- 76
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
QL P T+ +++ C+ VH I GF VI N ++ YA+
Sbjct: 77 --QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAK 134
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSA 323
CGS+ +++VFD+M D+ SWN ++ YA G +EA LF M + DS ++ ++++
Sbjct: 135 CGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMP-ERDSYSWTAMVTG 193
Query: 324 CSHAGLVQEGNKVFHSMLE--------------------------------NHGVVPQLD 351
+E V +S+++ H V LD
Sbjct: 194 YVKKDQPEEA-LVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLD 252
Query: 352 H----YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
++ ++D+ G+ G I EA + ++ ++ D V W+ ++ K R ++
Sbjct: 253 SDEVLWSSLMDMYGKCGCIDEARNIFDKI-IDKDVVSWTSMIDRYFKSSRWREGFSLFSE 311
Query: 408 LKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
L +G + N Y SG N + E G +V Y
Sbjct: 312 L--------IGSCERPNEYTFSGVLNACADLTTEELGRQVHGY 346
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/558 (39%), Positives = 322/558 (57%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D +V LI++++K +D AR LF + K ++VS+ ALISG++ +G E + F LL
Sbjct: 238 DDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELL 297
Query: 101 QYFFPNEFSLASVLISCDYLHGKL-----VHALALKFSLDAHVYVANALINMYSK-SCAD 154
S LI G L + +K V+ AL +YS+ + D
Sbjct: 298 VSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEID 357
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A ++F+ + V +WN+MI+ + L AI LF +M E P
Sbjct: 358 LARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTE-------------FTP 404
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T + +L ACA L +VH LI E + ++ ALI YA+CG+IS + Q+F
Sbjct: 405 NPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLF 464
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D + + V+WN+++ Y LHG EAL+LF+ M QP S TF+S+L ACSHAGLV+
Sbjct: 465 DLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVR 524
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG+++FH+M+ + + P +HYACMVD+LGR G++ +A + IR+MP+EP +W LLG+
Sbjct: 525 EGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGA 584
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C H +T LA +A+ +L +L+PG+ +V +SNIY + +F KA +R+ +K + K P
Sbjct: 585 CMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTP 644
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G + IE+ H F G + H Q +I+ KLEEL G+++ MGY ET ALHD+EEE KE
Sbjct: 645 GCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKE 704
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
HSEKLA+ F ++ + IRI+KN+R+C+DCH K S + + IVVRD
Sbjct: 705 LMFNVHSEKLAIAFGLITT----EPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRD 760
Query: 572 SNRFHHFKDRICSCNDYW 589
+NRFHHFKD ICSC DYW
Sbjct: 761 ANRFHHFKDGICSCGDYW 778
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 170/384 (44%), Gaps = 27/384 (7%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
+ H +I N DL L G AR LF +PK ++ + LI G++
Sbjct: 26 ETHAQLIRN--GYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSF 83
Query: 86 HGNAEECFRLFCSLLQ--YFFPNEFSLA-SVLISCDYLHGKLVHALALKFSLDAHVYVAN 142
+A + LL+ P+ F+ A ++ S D G +HA A+ D++++VA+
Sbjct: 84 SPDASS-ISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHAVVDGFDSNLFVAS 142
Query: 143 ALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEEEA 200
AL+++Y K S A KVF+ M R+ + WN+MI R C + ++
Sbjct: 143 ALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYD--------------DS 188
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
+ +F+ + +G+ D T + VL A A + + + L K GF D + LI
Sbjct: 189 VQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISV 248
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATF 317
+++C + ++ +F + DLVS+N+++ ++ +G+ + A++ F + V + S+T
Sbjct: 249 FSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTM 308
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
V L+ S G + + G + Q + + R+ I A +L E
Sbjct: 309 VGLIPVSSPFGHLHLACCI-QGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDE-S 366
Query: 378 MEPDSVIWSVLLGSCRKHGETRLA 401
E W+ ++ + G T +A
Sbjct: 367 SEKTVAAWNAMISGYAQSGLTEMA 390
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G + +H+ + + N Q+++V+ LI+MYAK G + +A LFD
Sbjct: 410 TSILSACAQLGALSFGKSVHQLIKSK--NLEQNIYVSTALIDMYAKCGNISEASQLFDLT 467
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV-- 125
++N V+W +I GY HG +E +LF +L F P+ + SVL +C H LV
Sbjct: 468 SEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACS--HAGLVRE 525
Query: 126 -----HALALKFSLD 135
HA+ K+ ++
Sbjct: 526 GDEIFHAMVNKYRIE 540
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/589 (37%), Positives = 335/589 (56%), Gaps = 28/589 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L A GN++ +H + + E D+ V+N L+ MY K G + D L++ M
Sbjct: 420 SLLSAATNTGNLQYGQSIHA-CVWKYGFET-DVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGKL 124
R+++SW A +SG G + +F +L+ F PN ++ S+L SC D +G+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537
Query: 125 VHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
VHA +K LD + +V ALI+MY+K ++A F + R++ +W +I +
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY----- 592
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
A+ E+AL FRQ+Q+EG+ P+ T + L C+ L + +HS++
Sbjct: 593 --------AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVF 644
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
K G D + +AL+ YA+CG + ++ +F+ + D ++WN+I+ YA +GQ +AL
Sbjct: 645 KSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALT 704
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F M + PD TF +LSACSH GLV+EG + F+SM + G+ P +DH ACMVD+L
Sbjct: 705 AFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDIL 764
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GRVG+ E E I++M + +++IW +LG+ + H L E AA KL +L+P + ++
Sbjct: 765 GRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYI 824
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SNI+ G ++ + +R M V+K PG SW+E +VH F S HPQ + I
Sbjct: 825 LLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHL 884
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
KL+EL +L + YVP+T LH++ E K+E L HSE+LAL FA+++ S I
Sbjct: 885 KLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSS----EKKI 940
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RI KN+RIC DCH+ MK S + +EIVVRD RFHHFK+ CSCND+W
Sbjct: 941 RIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 38/442 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
AT AC+L + Q+H DLFV + L+++YAK G ++ A +F M
Sbjct: 217 ATGLKACSLCMALDLGKQMHAQAFK--LGLLLDLFVGSALVDLYAKCGEIELASKMFIGM 274
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGK 123
P++N V+W L++GYAQ G+ +LFCS+++ NEF+L +VL C + G+
Sbjct: 275 PEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ 334
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
++H+L +K + + ++ L++MYSK A +A VF+ ++ +++ W+++I
Sbjct: 335 VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITC----- 389
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
L+ Q EE++ LF ++ P+ T +L A ++ ++H+ +
Sbjct: 390 LDQQG--------QSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACV 441
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
KYGFE D ++NAL+ Y + G + ++++ M DL+SWN+ L G L
Sbjct: 442 WKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPL 501
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD--HYAC-- 355
+F +M P+ TF+S+L +CS V G +V +++N QLD ++ C
Sbjct: 502 TIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKN-----QLDDNNFVCTA 556
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
++D+ + + +A+ + + D W+V++ + +T E A +Q++ +
Sbjct: 557 LIDMYAKCMYLEDADVAFNRLSVR-DLFTWTVII---TNYAQTNQGEKALNYFRQMQQ-E 611
Query: 416 SLGFVQMSNIYCLSGSFNKARL 437
+ + + CLSG + A L
Sbjct: 612 GVKPNEFTLAGCLSGCSSLASL 633
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 194/391 (49%), Gaps = 26/391 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+++ CA ++ A +H ++ + N L+V+ L+N+YAK Y AR + +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVS--LVNVYAKCRYSAYARLVLAK 172
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
MP R+VVSWTALI G G A + LF + + PNEF+LA+ L +C G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRAC 181
K +HA A K L ++V +AL+++Y+K E A K+F M +N ++WN ++
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNG---- 288
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+A+ + L LF + + + T + VLK CA + +HSL
Sbjct: 289 ---------YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K G+E + I L+ Y++CG + VF + D+V W++++ GQ++E+
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M + P+ T SLLSA ++ G +Q G + H+ + +G + +V
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI-HACVWKYGFETDVAVSNALVT 458
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ + G + + KL M ++ D + W+ L
Sbjct: 459 MYMKNGCVHDGTKLYESM-VDRDLISWNAYL 488
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 162/335 (48%), Gaps = 32/335 (9%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ + + ++ +C+ ++ Q+H H+I N ++ FV LI+MYAK YL+D
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN--FVCTALIDMYAKCMYLED 569
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
A F+ + R++ +WT +I+ YAQ E+ F + Q PNEF+LA L C
Sbjct: 570 ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
L G+ +H++ K + ++V +AL++MY+K C +EA +FE + R+ I+WN++
Sbjct: 630 LASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTI 689
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE 232
I +A+ +AL FR + EG++PD TF+ +L AC+ GLV E
Sbjct: 690 ICG-------------YAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV-E 735
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKA 291
+S+ +G ++ R G + KM + + W ++L A
Sbjct: 736 EGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGA 795
Query: 292 YALHGQ----AKEALQLFSNMNVQPDSATFVSLLS 322
+H K A +LF +QP+ + LLS
Sbjct: 796 SKMHNNLVLGEKAANKLFE---LQPEEESSYILLS 827
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 149/283 (52%), Gaps = 25/283 (8%)
Query: 123 KLVHALALK--FSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAF 178
K +H L +K + D+H++V+ L+N+Y+K C A+ V M R+V+SW ++I
Sbjct: 132 KAIHGLIVKDVINPDSHLWVS--LVNVYAK-CRYSAYARLVLAKMPDRDVVSWTALIQGL 188
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A E FA ++++LF+++Q EG+ P+ T + LKAC+ + +
Sbjct: 189 VA--------EGFAN-----DSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K G D + +AL+ YA+CG I L+ ++F M + V+WN +L YA G
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
L+LF +M +V+ + T ++L C+++ +++G +V HS++ G
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFIGCG 354
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+VD+ + G ++A + + + +PD V+WS L+ + G++
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQS 396
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+S +L+ CA + A A+H LI K D+ + +L++ YA+C + ++ V KM
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSW ++++ G A +++ LF M + P+ T + L ACS + G K
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG-K 233
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
H+ G++ L + +VDL + G I A K+ MP E + V W+VLL +
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNGYAQR 292
Query: 396 GET 398
G+
Sbjct: 293 GDV 295
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/573 (39%), Positives = 326/573 (56%), Gaps = 28/573 (4%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
Q+H MI + D ++ L++MYAK+G LDDAR +F+ +P+++++ W ALISG +
Sbjct: 326 QIHGFMIKACAD--SDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSH 383
Query: 86 HGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG----KLVHALALKFSLDAHVYV 140
G E LFC + + N +LA+VL S L VHALA K + +V
Sbjct: 384 GGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHV 443
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
N LI+ Y K +C A KVFE N+I++ SMI A C + E+
Sbjct: 444 VNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCD-------------HGED 490
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A+ LF ++ R+G+ PD S +L ACA L VH+ + K F D NAL++
Sbjct: 491 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVY 550
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
YA+CGSI + F + +VSW++++ A HG K AL +F M + P+ T
Sbjct: 551 TYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHIT 610
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
S+L AC+HAGLV E F SM E G+ +HY+CM+DLLGR G++ +A +L+ M
Sbjct: 611 LTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 670
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
P E ++ +W LL + R H + L +LAA KL LEP S V ++N Y +G +++
Sbjct: 671 PFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVA 730
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
+RK MK S+V+K P +SW+E+++RVH F G K HP+ I+ KLEEL + GYVP
Sbjct: 731 KVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVP 790
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFM 556
+ LHD+++ KE L HHSE+LA+ FA+++ + + IR+ KN+RIC DCH
Sbjct: 791 NLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPA----GAPIRVKKNLRICRDCHVAF 846
Query: 557 KLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S ++ +EI++RD NRFHHF D CSC DYW
Sbjct: 847 KFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 204/405 (50%), Gaps = 28/405 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ + +AC +++ ++H ++ +D+F N L++MY+K G + A +F +
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRT--GYDKDVFTANALVDMYSKLGDIHMAALVFGK 262
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVL------ISCDYL 120
+PK +VVSW A ISG HG+ + L + PN F+L+S+L + +
Sbjct: 263 VPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H +K D+ Y+ AL++MY+K D+A KVFE + ++++ WN++I+
Sbjct: 323 LGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCS 382
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+++ LF +M+ +EG + T + VLK+ A L + VH
Sbjct: 383 HGGCHGESLSLFCRMR-------------KEGSDINRTTLAAVLKSTASLEAISDTTQVH 429
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+L K GF D+ + N LI +Y +C + + +VF++ + +++++ S++ A + +
Sbjct: 430 ALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGE 489
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+A++LF M ++PD SLL+AC+ ++G +V H+ L + + +
Sbjct: 490 DAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV-HAHLIKRKFMTDVFAGNAL 548
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V + G I +A+ +P + V WS ++G +HG + A
Sbjct: 549 VYTYAKCGSIEDADLAFSGLP-DKGVVSWSAMIGGLAQHGHGKRA 592
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 29/366 (7%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFF 104
NHL++ Y+K AR +FDE P VSW++L++ Y+ + E F ++ +
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVR 100
Query: 105 PNEFSLASVL-ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF-E 161
NEF+L VL + D G VHA+A+ L ++VANAL+ MY DEA +VF E
Sbjct: 101 CNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDE 160
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
RN +SWN M++AF + A+ELF +M G+ P+ FS
Sbjct: 161 AARDRNAVSWNGMMSAFVKNDRCSDAVELFGEM-------------VWSGVRPNEFGFSC 207
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
V+ AC G VH+++ + G++ D ANAL+ Y++ G I ++ VF K+ D
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTD 267
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS-ACSHAGLVQEGNKVF 337
+VSWN+ + LHG + AL+L M + P+ T S+L +
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQI 327
Query: 338 HSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK- 394
H + D Y +VD+ + G + +A K+ +P + D ++W+ L+ C
Sbjct: 328 HGFMIK--ACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRK-DLLLWNALISGCSHG 384
Query: 395 --HGET 398
HGE+
Sbjct: 385 GCHGES 390
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 186/398 (46%), Gaps = 60/398 (15%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV N L+ MY FG++D+AR +FDE + RN VSW ++S + ++ + LF +
Sbjct: 134 DIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEM 193
Query: 100 L-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ PNEF + V+ +C D G+ VHA+ ++ D V+ ANAL++MYSK
Sbjct: 194 VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDI 253
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A VF + +V+SWN+ I+ C L ++ AL L Q++ G+
Sbjct: 254 HMAALVFGKVPKTDVVSWNAFIS---GCVLHGH----------DQHALELLLQMKSSGLV 300
Query: 214 PDWCTFSIVLKACAGLVTERHASA--VHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
P+ T S +LKACAG A +H + K + D I AL+ YA+ G + ++
Sbjct: 301 PNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDAR 360
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAG 328
+VF+ + DL+ WN+++ + G E+L LF M + + T ++L + +
Sbjct: 361 KVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLE 420
Query: 329 LVQEGNKVFHSMLE-------NHGVVPQLDHY------------------------ACMV 357
+ + +V H++ E +H V +D Y M+
Sbjct: 421 AISDTTQV-HALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMI 479
Query: 358 DLLGRVGRILEAEKLIREM---PMEPDSVIWSVLLGSC 392
L + +A KL EM +EPD + S LL +C
Sbjct: 480 TALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNAC 517
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++L +ACA +Q Q+H H+I D+F N L+ YAK G ++DA F
Sbjct: 509 VLSSLLNACASLSAYEQGKQVHAHLIKR--KFMTDVFAGNALVYTYAKCGSIEDADLAFS 566
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
+P + VVSW+A+I G AQHG+ + +F ++ + PN +L SVL +C+ H LV
Sbjct: 567 GLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACN--HAGLV 624
Query: 126 H-------ALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIA 176
++ F +D + +I++ ++ D+A ++ +M F N W +++A
Sbjct: 625 DEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLA 684
Query: 177 AFR 179
A R
Sbjct: 685 ASR 687
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 326/598 (54%), Gaps = 63/598 (10%)
Query: 15 CALHGNIKQAMQLHEHMINNFPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
C + G +K+ M + F P +DL N +I+ YA+ G L AR LF+E P R+V
Sbjct: 193 CLMGGYVKRNMLGDARQL--FDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDV 250
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFS 133
+WTA++ Y Q G +E R+F + Q E S
Sbjct: 251 FTWTAMVYAYVQDGMLDEARRVFDEMPQ---KREMSY----------------------- 284
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
N +I Y++ D ++FE M F N+ SWN MI+ + AQA LF
Sbjct: 285 --------NVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFD 336
Query: 193 KMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
M EEA+ + +++R+G + + TF L ACA +
Sbjct: 337 MMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALEL 396
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH + + G+E ++ NAL+ Y +CG I + VF + + D+VSWN++L YA
Sbjct: 397 GKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYAR 456
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG ++AL +F +M V+PD T V +LSACSH GL G + FHSM +++G+ P
Sbjct: 457 HGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSK 516
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYACM+DLLGR G + EA+ LIR MP EPD+ W LLG+ R HG L E AA + ++
Sbjct: 517 HYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKM 576
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP +S +V +SN+Y SG + +R +M+ V+K PG SW+E++N++H F G
Sbjct: 577 EPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCF 636
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP++ I+ LEEL ++K GYV T L LHD+EEE K+ L +HSEKLA+ F I+
Sbjct: 637 HPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMP 696
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S IR+MKN+R+C DCHN +K S ++G+ I+VRDS+R+HHF + ICSC DYW
Sbjct: 697 S----GKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 186/394 (47%), Gaps = 55/394 (13%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+DLF N ++ YA+ L DAR LFD MP+++VVSW A++SGY + G+ +E +F +
Sbjct: 93 KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM 152
Query: 100 LQYFFPNEFSLA-SVLISCDYLHGKLVHALAL-KFSLDAHVYVANALINMYSK-SCADEA 156
P++ S++ + L++ G+L A L + D + N L+ Y K + +A
Sbjct: 153 -----PHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDA 207
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK--------------------MKN 196
++F+ + R++ISWN+MI+ + +QA LF + M +
Sbjct: 208 RQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLD 267
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
E +F +RE ++++++ AG + L + F + N
Sbjct: 268 EARRVFDEMPQKRE------MSYNVMI---AGYAQYKRMDMGRELFEEMPFP-NIGSWNI 317
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDS-- 314
+I Y + G ++ ++ +FD M D VSW +I+ YA +G +EA+ + M +S
Sbjct: 318 MISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLN 377
Query: 315 -ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH-YACMVD--LLG---RVGRIL 367
+TF LSAC+ ++ G +V HG V + + C+V L+G + G I
Sbjct: 378 RSTFCCALSACADIAALELGKQV-------HGQVVRTGYEKGCLVGNALVGMYCKCGCID 430
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
EA + + + D V W+ +L +HG R A
Sbjct: 431 EAYDVFQGV-QHKDIVSWNTMLAGYARHGFGRQA 463
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 187/440 (42%), Gaps = 82/440 (18%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPN----EPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
F+ LH +I H N+P +P + T I+ + + G+ D A +FD
Sbjct: 5 FNLRQLHSSI-----FHVQRPTNYPKPHFEDPHTVKCTK-AISTHMRNGHCDLALCVFDA 58
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
MP RN VS+ A+ISGY ++ LF + P++ + L+ Y + +
Sbjct: 59 MPLRNSVSYNAMISGYLRNAKFSLARDLFDKM-----PHKDLFSWNLMLTGYARNRRLRD 113
Query: 128 LALKFS--LDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF-RACKL 183
+ F + V NA+++ Y +S DEA VF+ M +N ISWN ++AA+ R+ +L
Sbjct: 114 ARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRL 173
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
EEA LF DW
Sbjct: 174 --------------EEARRLFES------KSDW--------------------------- 186
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ + N L+ Y + + ++Q+FD++ DL+SWN+++ YA G +A +
Sbjct: 187 ------ELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARR 240
Query: 304 LFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
LF V+ D T+ +++ A G++ E +VF M + + Y M+ +
Sbjct: 241 LFEESPVR-DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREM-----SYNVMIAGYAQY 294
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
R+ +L EMP P+ W++++ ++G+ LA+ A + DS+ + +
Sbjct: 295 KRMDMGRELFEEMPF-PNIGSWNIMISGYCQNGD--LAQ-ARNLFDMMPQRDSVSWAAII 350
Query: 424 NIYCLSGSFNKARLIRKEMK 443
Y +G + +A + EMK
Sbjct: 351 AGYAQNGLYEEAMNMLVEMK 370
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 330/559 (59%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV N LI+MYA G + A LF + + V++W A+I+GY ++G+ +E +F +L
Sbjct: 205 DQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGML 264
Query: 101 QYFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ P +E +L SV +C L G+ + A + + +A AL++MY+K C
Sbjct: 265 EVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAK-CGEL 323
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+A ++F+ M R+V++W++MI+ + + EAL +F ++Q +
Sbjct: 324 DKARRLFDRMHSRDVVAWSAMISGY-------------TQSDRCREALAIFNEMQGTEVN 370
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T VL ACA L VHS I + ++ AL+ YA+CG I + +
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F+ M + +W +++K A +G+++EAL+LFS+M N++P TF+ +L ACSH LV
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG + F SM +++G+ P+++HY CMVDLLGR G I EA + IR MP+EP++V+W LL
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+C H + E A ++ L+P S ++ +SN Y G + A ++RKEMK V K
Sbjct: 551 ACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKI 610
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IE+E + EF + HPQ I++K+ E+I +K +GY+P T+ A D++E K
Sbjct: 611 PGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEK 670
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
+ + HHSEKLA+ F +M R + IR+ KN+R+C+DCH+ KL S + +EI+VR
Sbjct: 671 QVSVSHHSEKLAIAFGLMKS----RPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVR 726
Query: 571 DSNRFHHFKDRICSCNDYW 589
D NRFHHFKD +CSCNDYW
Sbjct: 727 DRNRFHHFKDGLCSCNDYW 745
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 178/391 (45%), Gaps = 56/391 (14%)
Query: 36 PNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL 95
P+ P+ N LI + + G+ +DA HLF EM VS
Sbjct: 129 PHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVS-------------------- 168
Query: 96 FCSLLQYFFPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKS 151
P++ ++A+ + S CD G+ V A A K +V N+LI+MY+ S
Sbjct: 169 ---------PDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYA-S 218
Query: 152 CAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C D A +F ++ + VI+WN+MIA + + +E+F M E A F
Sbjct: 219 CGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGML-EVRAPF------- 270
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
D T V AC L + + G +A AL+ YA+CG +
Sbjct: 271 -----DEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDK 325
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSH 326
++++FD+M D+V+W++++ Y + +EAL +F+ M V P+ T VS+LSAC+
Sbjct: 326 ARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAV 385
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G ++ G K HS + + + +VD + G I +A K MP+ ++ W+
Sbjct: 386 LGALETG-KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR-NTWTWT 443
Query: 387 VLLGSCRKHGETRLA-ELAATKLK-QLEPGD 415
L+ +G +R A EL ++ L+ +EP D
Sbjct: 444 ALIKGMASNGRSREALELFSSMLEANIEPTD 474
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA+ G ++ +H ++ + P + + L++ YAK G + DA F+ MP
Sbjct: 378 SVLSACAVLGALETGKWVHSYIRRK--DLPLTVILGTALVDFYAKCGCIKDAVKAFESMP 435
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVHAL 128
RN +WTALI G A +G + E LF S+L+ P + + VL++C HG LV
Sbjct: 436 VRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACS--HGCLVEEG 493
Query: 129 ALKFSLDAHVYVANALINMYS--------KSCADEAWKVFENMEFR-NVISWNSMIAA 177
F+ Y I Y DEA++ NM N + W ++++A
Sbjct: 494 RRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSA 551
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/604 (36%), Positives = 346/604 (57%), Gaps = 55/604 (9%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S+ + + H CAL + + D+ + N L++MY + G ++ARH
Sbjct: 337 SSLRFGRMIHGCALEKGLDR-----------------DIVLGNALLDMYTRCGSPEEARH 379
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD---- 118
LF +P N VSW +I+G +Q G + LF + L+ P + ++L +
Sbjct: 380 LFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPE 438
Query: 119 ----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFEN--MEFR-NVI 169
G+ +H+ + + + A++ MY+ SC DEA F+ ME R +V+
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYA-SCGAIDEAAASFQRGAMEDRHDVV 497
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SWN++I++ ++ + + AL FR++ G+AP+ T VL ACAG
Sbjct: 498 SWNAIISSL-------------SQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGA 544
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSI 288
VH + G E + +A AL Y RCGS+ ++++F+K+ D+V +N++
Sbjct: 545 AALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAM 604
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ AY+ +G A EAL+LF M +PD +FVS+LSACSH GL EG ++F SM +++G
Sbjct: 605 IAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYG 664
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ P DHYAC VD+LGR G + +AE+LIR M ++P ++W LLG+CRK+ + LA
Sbjct: 665 IAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLAN 724
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
+ +++L+PGD +V +SNI +G +++A +R EM+ +RK G SWIEI++RVHEF
Sbjct: 725 SMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEF 784
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
+G + HP+ E I+++LE L +++ +GYVP+T L L ++E KE L HSE+LA+
Sbjct: 785 VAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIAL 844
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
+M+ + +R+MKN+R+C DCHN K S ++ KEIVVRD++RFHHF D CSC
Sbjct: 845 GVMSSST-----DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSC 899
Query: 586 NDYW 589
DYW
Sbjct: 900 GDYW 903
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 206/400 (51%), Gaps = 30/400 (7%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL A + I+QA +H I Q L V+ L + YA+ G+L A+ +FD
Sbjct: 230 TLVIALTVCATIRQAQAIH--FIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAA 287
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-GKLVHA 127
+R+VVSW A++ YAQHG+ E LF +L + P++ +L + C L G+++H
Sbjct: 288 ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHG 347
Query: 128 LALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
AL+ LD + + NAL++MY++ +EA +F+ + N +SWN+MIA +
Sbjct: 348 CALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKR 406
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA----VHSLI 242
A+ELF +M Q EGMAP T+ +L+A A E A A +HS I
Sbjct: 407 AVELFQRM-------------QLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRI 453
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY---HDLVSWNSILKAYALHGQAK 299
G+ + I A++ YA CG+I + F + HD+VSWN+I+ + + HG K
Sbjct: 454 VSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGK 513
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
AL F M+ V P+ T V++L AC+ A + EG ++ H L + G+ L +
Sbjct: 514 RALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG-EIVHDHLRHSGMESNLFVATAL 572
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ GR G + A ++ ++ +E D VI++ ++ + ++G
Sbjct: 573 ASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 192/390 (49%), Gaps = 36/390 (9%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
+ Q ++H +++ E + NHL+ +Y K L D +F + R+ SWT +I
Sbjct: 45 LSQGRRIHARIVSLGLEEE----LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTII 100
Query: 81 SGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLD 135
+ Y +HG A+ +F + Q + + +VL +C D G+ +HA ++ L
Sbjct: 101 TAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLK 160
Query: 136 AHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
+AN L+++Y S C A +FE ME R+++SWN+ IAA AQ+ +L
Sbjct: 161 GKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAA------NAQSGDLGI-- 211
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
AL LF+++Q EG+ P T I L CA T R A A+H ++ + G E V++
Sbjct: 212 -----ALELFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVS 263
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
AL AYAR G + +K+VFD+ D+VSWN++L AYA HG EA LF+ M +
Sbjct: 264 TALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIS 323
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P T V+ + CS ++ H G+ + ++D+ R G EA
Sbjct: 324 PSKVTLVNASTGCSSLRF----GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARH 379
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
L + +P ++V W+ ++ + G+ + A
Sbjct: 380 LFKRIPC--NAVSWNTMIAGSSQKGQMKRA 407
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 151/322 (46%), Gaps = 27/322 (8%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +HA + L+ + N L+ +Y K + +VF +E R+ SW ++I A+
Sbjct: 47 QGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAY- 103
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ + A+ +F ++Q+EG+ D TF VLKACA L ++H
Sbjct: 104 ------------TEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ I + G + +V+AN L+H Y CG ++ + +F+KM DLVSWN+ + A A G
Sbjct: 152 AWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLG 210
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
AL+LF M V+P T V L+ C+ Q H ++ G+ L +
Sbjct: 211 IALELFQRMQLEGVRPARITLVIALTVCATIRQAQ----AIHFIVRESGLEQTLVVSTAL 266
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
R+G + +A+++ + E D V W+ +LG+ +HG ++E A + L G S
Sbjct: 267 ASAYARLGHLYQAKEVF-DRAAERDVVSWNAMLGAYAQHGH--MSEAALLFARMLHEGIS 323
Query: 417 LGFVQMSNIYCLSGSFNKARLI 438
V + N S R+I
Sbjct: 324 PSKVTLVNASTGCSSLRFGRMI 345
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/562 (39%), Positives = 331/562 (58%), Gaps = 30/562 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ LI YA G + A+ LFDE+P ++VVSW A+ISGYA+ G +E LF +
Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187
Query: 100 LQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
++ P+E + +VL +C + G+ VH+ D+++ + NALI++YSK C +
Sbjct: 188 MKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSK-CGE 246
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +F+ + +++VISWN++I + M +EAL LF+++ R G
Sbjct: 247 VETACGLFQGLSYKDVISWNTLIGGY-------------THMNLYKEALLLFQEMLRSGE 293
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLS 270
P+ T VL ACA L +H I K G + + + +LI YA+CG I +
Sbjct: 294 TPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 353
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
QVF+ M + L SWN+++ +A+HG+A + LFS M ++PD TFV LLSACSH+
Sbjct: 354 HQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHS 413
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G++ G +F SM +++ + P+L+HY CM+DLLG G EAE++I M MEPD VIW
Sbjct: 414 GMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCS 473
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +C+ HG LAE A L ++EP + ++ +SNIY +G + IR + G +
Sbjct: 474 LLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCM 533
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG S IE+++ V EF G K HPQ I+ LEE+ L+ G+VP+TS L ++EE
Sbjct: 534 KKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 593
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S + +EI
Sbjct: 594 EWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLLSKIYKREI 649
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
V RD RFHHF+D +CSCNDYW
Sbjct: 650 VARDRTRFHHFRDGVCSCNDYW 671
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 197/419 (47%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F+ + + N + W +I G+A + L+ C + PN ++ +
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70
Query: 114 LISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D +YV +LI+MY ++ ++A+KVF+ R+V
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130
Query: 169 ISWNSMIAAF--RACKLEAQA----------------IELFAKMKNEEEALFLFRQLQRE 210
+S+ ++I + R AQ I +A+ +EAL LF ++ +
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T+ VL ACA + VHS + +GF+ + I NALI Y++CG + +
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F ++Y D++SWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHL 310
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ GV ++D+ + G I A ++ M + S W
Sbjct: 311 GAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS-W 368
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG + +++++ +EP D + FV + + SG + R I + M
Sbjct: 369 NAMIFGFAMHGRADASFDLFSRMRKIGIEP-DDITFVGLLSACSHSGMLDLGRHIFRSM 426
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 182/411 (44%), Gaps = 83/411 (20%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y T+ ACA G+I+ Q+H + ++ +L + N LI++Y+K G ++ A LF
Sbjct: 199 YVTVLSACAHSGSIELGRQVHSWVDDH--GFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLH----G 122
+ ++V+SW LI GY +E LF +L+ PN+ ++ SVL +C +L G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316
Query: 123 KLVHALA---LKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
+ +H LK +A + +LI+MY+K C D A +VF +M +++ SWN+MI
Sbjct: 317 RWIHVYIDKRLKGVTNASS-LRTSLIDMYAK-CGDIEAAHQVFNSMLHKSLSSWNAMIFG 374
Query: 178 FRACKLEAQAIELFAKMKNEEEALF-LFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F M +A F LF ++++ G+ PD TF +L AC+
Sbjct: 375 F--------------AMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACS--------- 411
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-----DLVSWNSILKA 291
HS G + L + +F MT L + ++
Sbjct: 412 --HS------------------------GMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDL 445
Query: 292 YALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G KEA ++ + M ++PD + SLL AC G V+ ++++ P
Sbjct: 446 LGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPS-- 503
Query: 352 HYACMVDLLGRVG--------RILEAEKLIREMP----MEPDSVIWSVLLG 390
Y + ++ G R L K ++++P +E DSV++ ++G
Sbjct: 504 SYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVG 554
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/592 (36%), Positives = 336/592 (56%), Gaps = 30/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G + Q+H +I +++V + LI+MYAK G LD A +
Sbjct: 418 YPSILRTCTSVGALDLGEQIHTQVIKT--GFQFNVYVCSVLIDMYAKHGKLDTAHVILRT 475
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISCDYLH----G 122
+ + +VVSWTALISGYAQH E + F +L ++ +S + +C + G
Sbjct: 476 LTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG 535
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA + + + NAL+++Y++ C EA+ FE ++ ++ ISWN +I+ F
Sbjct: 536 RQIHAQSYVSGYSEDLSIGNALVSLYAR-CGRIKEAYLEFEKIDAKDSISWNGLISGF-- 592
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ E+AL +F Q+ R + + TF + A A + + +H+
Sbjct: 593 -----------AQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+I K GF+ D ++NALI YA+CGSI +++ F +M + VSWN+++ Y+ HG E
Sbjct: 642 MIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNE 701
Query: 301 ALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ LF M P+ TFV +LSACSH GLV +G F SM + HG+VP+ HYAC+V
Sbjct: 702 AVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVV 761
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DL+ R G + A K I EMP+EPD+ IW LL +C H + E AA L +LEP DS
Sbjct: 762 DLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSA 821
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SN+Y +SG ++ R+ M+ V+K PG SWIE++N VH F G + HP +
Sbjct: 822 TYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADK 881
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++ L EL + +GY + L+D+E+E K+ +Y HSEKLA+ F +++ +
Sbjct: 882 IYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLS----LSDT 937
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I +MKN+R+C DCH+++K S + + I+VRD+ RFHHF+ ICSC DYW
Sbjct: 938 VPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 197/395 (49%), Gaps = 29/395 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
Q Y L C G++ + +LH ++ F NE + N L+++Y G LD +
Sbjct: 11 QTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNES---VLCNKLVDVYFALGDLDGVVKV 67
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCD----- 118
F++MP R+V SW +ISG+ + + LF C + + P E S ASVL +C
Sbjct: 68 FEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIG 127
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAA 177
+ + +HA + L ++N LI +Y+K+ A KVF+N+ ++ +SW +MI+
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG 187
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F ++ EEEA+ LF ++ G+ P FS VL C +
Sbjct: 188 F-------------SQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQ 234
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+L+ KYG +T + NAL+ Y+R + +++VF KM D VS+NS++ A G
Sbjct: 235 LHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGF 294
Query: 298 AKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+ AL+LF+ M ++PD T SLLSAC+ G + +G ++ HS + G+ +
Sbjct: 295 SDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQL-HSYVIKAGISSDMIVEG 353
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++DL I A ++ E + V+W+V+L
Sbjct: 354 ALLDLYVNCSDIKTAHEMFLTAQTE-NVVLWNVML 387
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 189/384 (49%), Gaps = 28/384 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+ +V N L+ +Y++ A +F +M ++ VS+ +LISG AQ G ++ LF +
Sbjct: 247 ETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMK 306
Query: 101 Q-YFFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ Y P+ ++AS+L +C G+ +H+ +K + + + V AL+++Y +C+D
Sbjct: 307 RDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYV-NCSDI 365
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A ++F + NV+ WN M+ AF K+ N E+ +FRQ+Q +G+
Sbjct: 366 KTAHEMFLTAQTENVVLWNVMLVAF-------------GKLDNLSESFRIFRQMQIKGLI 412
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T+ +L+ C + +H+ + K GF+ + + + LI YA+ G + + +
Sbjct: 413 PNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVI 472
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
+T D+VSW +++ YA H EAL+ F M +Q D+ F S +SAC+ +
Sbjct: 473 LRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQAL 532
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+G ++ H+ G L +V L R GRI EA ++ + DS+ W+ L+
Sbjct: 533 NQGRQI-HAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLIS 590
Query: 391 SCRKHG--ETRLAELAATKLKQLE 412
+ G E L A +LE
Sbjct: 591 GFAQSGYCEDALKVFAQMNRAKLE 614
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
++ G+ + T+ +L C + +H I K GF +++V+ N L+ Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ +VF+ M + SW+ I+ + + L LFS M NV P +F S+L A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
CS + + H+ + HG++ ++ L + G I+ A K+ + + DSV
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTK-DSV 179
Query: 384 IWSVLLGSCRKHG 396
W ++ ++G
Sbjct: 180 SWVAMISGFSQNG 192
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 326/576 (56%), Gaps = 41/576 (7%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG---NAEECFR-LFCSLLQYF 103
+I Y + G LD AR D M ++ VV+W A+ISGY HG A E FR ++ +Q+
Sbjct: 231 MIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW- 289
Query: 104 FPNEFSLASVLISCD----YLHGKLVHALALKF----SLDAHVYVANALINMYSK-SCAD 154
+EF+ SVL +C +LHGK VHA L+ SLD + V NAL +Y K D
Sbjct: 290 --DEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVD 347
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE----------------- 197
EA +VF M ++++SWN++++ + +A F +M
Sbjct: 348 EARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGF 407
Query: 198 -EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
EE+L LF +++ EG P F+ + ACA L H +H+ + + GF+ NA
Sbjct: 408 GEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNA 467
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
LI YA+CG + + +F M Y D VSWN+++ A HG +AL+LF M ++ PD
Sbjct: 468 LITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPD 527
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
TF+++LS CSHAGLV+EG++ F SM +G+ P DHYA M+DLL R G+ EA+ +I
Sbjct: 528 RITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMI 587
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
MP+EP IW LL CR HG L AA +L +L P +V +SN+Y G ++
Sbjct: 588 ETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWD 647
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
+RK M+ V+K PG SWIE+EN+VH F HP+ +A++ LEEL +++ +G
Sbjct: 648 DVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLG 707
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
Y+P+T LHD+E E KE L HSEKLA+ F ++ + +R+ KN+RIC DCH
Sbjct: 708 YIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLK----LPLGATVRVFKNLRICGDCH 763
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N K S ++ +EIVVRD RFHHFK+ CSC +YW
Sbjct: 764 NAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 176/379 (46%), Gaps = 69/379 (18%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
ATL+ C G + +A Q+ M +DL N +++ Y G +D+A+ F+EM
Sbjct: 337 ATLYWKC---GKVDEARQVFNQM------PVKDLVSWNAILSGYVNAGRIDEAKSFFEEM 387
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGK 123
P+RN+++WT +ISG AQ+G EE +LF + + F P +++ A +I+C +L HG+
Sbjct: 388 PERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGR 447
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAFRACK 182
+HA ++ D+ + NALI MY+K EA +F M + + +SWN+MIAA
Sbjct: 448 QLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHG 507
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHS 240
AQA+ELF M E+ + PD TF VL C AGLV E H S
Sbjct: 508 HGAQALELFELMLKED-------------ILPDRITFLTVLSTCSHAGLVEEGH-RYFKS 553
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ YG I H YAR ++ G+ E
Sbjct: 554 MSGLYG------ICPGEDH-YAR------------------------MIDLLCRAGKFSE 582
Query: 301 ALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD-HYACMVDL 359
A + M V+P + +LL+ C G + G + + E ++PQ D Y + ++
Sbjct: 583 AKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFE---LMPQHDGTYVLLSNM 639
Query: 360 LGRVGR---ILEAEKLIRE 375
VGR + + KL+R+
Sbjct: 640 YATVGRWDDVAKVRKLMRD 658
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 222/547 (40%), Gaps = 116/547 (21%)
Query: 8 YATLFHACALHGNIKQ--AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
YA C H + A +H HMI + +P+ ++ N LI++Y K L A HLF
Sbjct: 16 YAAQLQQCCPHNPMSYSIARTVHAHMIAS-GFKPRG-YILNRLIDVYCKSSDLVSAHHLF 73
Query: 66 DEMPK---------------------------------RNVVSWTALISGYAQHGNAEEC 92
DE+ + R+ V + A+I+GY+ + +
Sbjct: 74 DEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGA 133
Query: 93 FRLFCSLLQYFF-PNEFSLASV-----LISCDYLHGKLVHALALKFSLDAHVYVANALIN 146
LF LL+ F P+ F+ SV LI D + +H +K V NAL++
Sbjct: 134 IELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLS 193
Query: 147 MYSKSCAD-----------EAWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKM 194
++ K CA A K+F+ M R+ +SW +MIA + R +L+A A + M
Sbjct: 194 VFVK-CASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDA-ARQFLDGM 251
Query: 195 KNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ EAL +FR++ G+ D T++ VL ACA H
Sbjct: 252 TEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGK 311
Query: 237 AVHSLI----AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH+ I + + + NAL Y +CG + ++QVF++M DLVSWN+IL Y
Sbjct: 312 QVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGY 371
Query: 293 -------------------------------ALHGQAKEALQLFSNM---NVQPDSATFV 318
A +G +E+L+LF+ M +P F
Sbjct: 372 VNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFA 431
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+ AC+ + G ++ H+ L G L ++ + + G + A L MP
Sbjct: 432 GAIIACAWLAALMHGRQL-HAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPY 490
Query: 379 EPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
DSV W+ ++ + +HG A EL LK+ D + F+ + + +G +
Sbjct: 491 -LDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR 549
Query: 438 IRKEMKG 444
K M G
Sbjct: 550 YFKSMSG 556
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/630 (34%), Positives = 347/630 (55%), Gaps = 66/630 (10%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK----------- 54
++ ++ +C + +++ +H ++ DL+ N L+NMYAK
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVR--LGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 55 --------------------------FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN 88
FG +D R +F+ MP+++VVS+ +I+GYAQ G
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 89 AEECFRLFCSL-LQYFFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANA 143
E+ R+ + P+ F+L+SVL D + GK +H ++ +D+ VY+ ++
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 144 LINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
L++MY+KS +++ +VF + R+ ISWNS++A + + EAL
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY-------------VQNGRYNEALR 329
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
LFRQ+ + P FS V+ ACA L T +H + + GF + IA+AL+ Y+
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
+CG+I ++++FD+M D VSW +I+ +ALHG EA+ LF M V+P+ FV+
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+L+ACSH GLV E F+SM + +G+ +L+HYA + DLLGR G++ EA I +M +E
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE 509
Query: 380 PDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
P +WS LL SC H LAE A K+ ++ + +V M N+Y +G + + +R
Sbjct: 510 PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLR 569
Query: 440 KEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETS 499
M+ +RK P SWIE++N+ H F SG + HP + I + L+ ++ Q++ GYV +TS
Sbjct: 570 LRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Query: 500 LALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLA 559
LHD++EEHK E L+ HSE+LA+ F I+N + IR+ KNIRIC DCH +K
Sbjct: 630 GVLHDVDEEHKRELLFGHSERLAVAFGIINT----EPGTTIRVTKNIRICTDCHVAIKFI 685
Query: 560 SDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + +EI+VRD++RFHHF CSC DYW
Sbjct: 686 SKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 195/454 (42%), Gaps = 84/454 (18%)
Query: 23 QAMQLHEHMINNFPNEPQDLFVTNH--LINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
QA QLH I Q L T+ +I++Y L +A LF + V++W ++I
Sbjct: 23 QAKQLHAQFIRT-----QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVI 77
Query: 81 SGYAQHGNAEECFRLFCSLLQYFF--------PNEFSLASVLISC----DYLHGKLVHAL 128
+ LF L F P+ SVL SC D G+ VH
Sbjct: 78 RCFTDQS-------LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 129 ALKFSLDAHVYVANALINMYSK--------------------------------SC---- 152
++ +D +Y NAL+NMY+K +C
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 153 -ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D +VFE M ++V+S+N++IA +A+ E+AL + R++
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAG-------------YAQSGMYEDALRMVREMGTTD 237
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ PD T S VL + V +H + + G + D I ++L+ YA+ I S+
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VF ++ D +SWNS++ Y +G+ EAL+LF M V+P + F S++ AC+H
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS-V 387
+ G K H + G + + +VD+ + G I A K+ M + D V W+ +
Sbjct: 358 TLHLG-KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAI 415
Query: 388 LLG-SCRKHGETRLAELAATKLKQLEPGDSLGFV 420
++G + HG ++ K + ++P + + FV
Sbjct: 416 IMGHALHGHGHEAVSLFEEMKRQGVKP-NQVAFV 448
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/588 (36%), Positives = 326/588 (55%), Gaps = 21/588 (3%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++F AC+ +++ + H + D+ V L+N YA+ G +D AR F E
Sbjct: 233 FVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAE 292
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVH 126
MP+RN VSWT++I+ + Q G+ LL+ P +L + L C+ L +LV
Sbjct: 293 MPERNAVSWTSMIAAFTQIGHLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVE 352
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A+A + + V + L+ Y++ E A +VF R W++ L
Sbjct: 353 AIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDA--------ALVT 401
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA-K 244
I ++A+ ++ L+ G++PD + L ACA L +H+ +A
Sbjct: 402 AMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAAD 461
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
+ D + NA++ Y +CGS+ ++ FD M D +SWN++L A A HG+ ++ L
Sbjct: 462 RRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDL 521
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M + F++LLSAC+HAGLV+ G + F +M +HGVVP +HY CMVDLLG
Sbjct: 522 FRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLG 581
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R GR+ +A +++ MP+ PD+ W L+G+CR +G+T AA ++ +L + +V
Sbjct: 582 RKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVA 641
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+ NIY +G ++ A +RK M +RK PG+S IEI ++VHEF + HPQ EAI+ +
Sbjct: 642 LCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAE 701
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
LE ++G ++ GY T LHD+EEE KE+ L HSEKLA+ F +M+ + S +R
Sbjct: 702 LERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMST----PQGSTLR 757
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++KN+R+CVDCHN K S + G+EIVVRD RFHHFKD CSC DYW
Sbjct: 758 VIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 172/348 (49%), Gaps = 35/348 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D ++ + L+ MY + G L+ A +F ++ +++V WT LIS Y G++ LF +
Sbjct: 60 RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119
Query: 100 LQYFFP-NEFSLASVLISC---DYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
LQ + SVL +C ++L G+L+H A++ L VA+AL++MY + C
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGR-CGS 178
Query: 155 --EAWKVFENMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+A +F ++E +V+ WN+MI A ++ + EAL +F ++ + G
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMITA-------------NSQNGSPREALEIFYRMLQLG 225
Query: 212 MAPDWCTFSIVLKACAGLVTER--HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ PD TF V KAC+ + R H+ + + G D V+A AL++AYARCG I
Sbjct: 226 IPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDC 285
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+++ F +M + VSW S++ A+ G A++ F M V P +T + L C
Sbjct: 286 ARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGCED 344
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
+ ++ ++ + GVV + A + DL+ R E IR
Sbjct: 345 LRVA----RLVEAIAQEIGVVTDV---AIVTDLVMAYARCDGQEDAIR 385
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 328/587 (55%), Gaps = 57/587 (9%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVV---------------------------- 74
F + L++MYAK G + DAR +FDEM +NVV
Sbjct: 181 FTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEER 240
Query: 75 ---SWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVH 126
+WT +++G Q+G E +F + + ++++ S+L +C L GK +H
Sbjct: 241 DSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIH 300
Query: 127 ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A + + +V+V +AL++MYSK A VF M ++N+ISW +MI +
Sbjct: 301 AYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGY------- 353
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ EEA+ +F ++QR+G+ PD T V+ +CA L + + H L
Sbjct: 354 ------GQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS 407
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G ++NAL+ Y +CGSI + ++FD+M++HD VSW +++ YA G+AKE + LF
Sbjct: 408 GLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLF 467
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M V+PD TF+ +LSACS +GLV +G FHSM ++H +VP DHY CM+DL R
Sbjct: 468 EKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSR 527
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G + +AE+ I++MP PD+ W+ LL +CR G+ + + AA L +L+P + +V +
Sbjct: 528 SGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLL 587
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
+++ G +N +R+ M+ +V+K PG SWI+ +N+VH F++ + HP I++KL
Sbjct: 588 CSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKL 647
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
+ L ++ GY P+ S LHD+ + K L HHSEKLA+ F ++ IRI
Sbjct: 648 QWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLI----FVPPEMPIRI 703
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+KN+R+CVDCHN K S + G++I+VRD+ RFH F + ICSC D+W
Sbjct: 704 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 226/471 (47%), Gaps = 64/471 (13%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H ++ P+ P ++ N L+ YA G L AR +FD MP RN+V+ +L+S A+
Sbjct: 32 VHALILRTLPH-PSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARA 90
Query: 87 GNAEECFRLFCSLLQY----------------------------------FFPNEFSLAS 112
G + RLF SL Q P+ +++
Sbjct: 91 GLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSG 150
Query: 113 VLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRN 167
V++ L G+ VH L+ A+ + + L++MY+K +A +VF+ ME +N
Sbjct: 151 VVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKN 210
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKN------------------EEEALFLFRQLQR 209
V+ N+MI CK+ A+A LF ++ E EAL +FR+++
Sbjct: 211 VVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA 270
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
EG+ D TF +L AC L +H+ I + +ED+ + +AL+ Y++C S+ L
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRL 330
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++ VF +M + +++SW +++ Y +G +EA+++FS M ++PD T S++S+C++
Sbjct: 331 AEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCAN 390
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
++EG + FH + G+ P + +V L G+ G I +A +L EM D V W+
Sbjct: 391 LASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWT 448
Query: 387 VLLGSCRKHGETR-LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
L+ + G+ + +L L + D + F+ + + SG +K R
Sbjct: 449 ALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGR 499
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 235 ASAVHSLIAK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+AVH+LI + T + N L+ AYA G + +++VFD M +LV+ NS+L A A
Sbjct: 29 TAAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALA 88
Query: 294 LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH-GVVP 348
G ++ +LF+++ Q D+ ++ +LL+ S AG + ++L + GV P
Sbjct: 89 RAGLVRDMERLFTSLP-QRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRP 143
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 331/562 (58%), Gaps = 30/562 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ LI YA GY+ A+ +FDE+P ++VVSW A+ISGYA+ GN +E LF +
Sbjct: 167 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 226
Query: 100 LQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
++ P+E ++ SV+ +C G+ VH+ +++ + NALI++Y K C +
Sbjct: 227 MKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIK-CGE 285
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +FE + +++VISWN++I + M +EAL LF+++ R G
Sbjct: 286 VETACGLFEGLSYKDVISWNTLIGGY-------------THMNLYKEALLLFQEMLRSGE 332
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLS 270
+P+ T +L ACA L +H I K G + + +LI YA+CG I +
Sbjct: 333 SPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAA 392
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHA 327
+QVFD + L SWN+++ +A+HG+A A +FS M ++PD TFV LLSACSH+
Sbjct: 393 QQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHS 452
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G++ G +F SM E++ + P+L+HY CM+DLLG G EAE++I M MEPD VIW
Sbjct: 453 GMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCS 512
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +C+ + L E A L ++EP + +V +SNIY +G +N+ IR + +
Sbjct: 513 LLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGM 572
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS L ++EE
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 632
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S + +EI
Sbjct: 633 EWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLISKIYKREI 688
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+ RD RFHHF+D +CSCNDYW
Sbjct: 689 IARDRTRFHHFRDGVCSCNDYW 710
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 199/420 (47%), Gaps = 34/420 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F+ + + N++ W + G+A + L+ C + PN ++ +
Sbjct: 50 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFL 109
Query: 114 LISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D +YV +LI+MY ++ ++A KVF+ R+V
Sbjct: 110 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 169
Query: 169 ISWNSMIAAFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQRE 210
+S+ ++I + + A A ++F A+ N +EAL LF+++ +
Sbjct: 170 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 229
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ ACA + VHS I +GF + I NALI Y +CG + +
Sbjct: 230 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F+ ++Y D++SWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 349
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G ++ G + H + GV H ++D+ + G I EA + + + + W
Sbjct: 350 GAIEIG-RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI-EAAQQVFDSILNRSLSSW 407
Query: 386 SVLLGSCRKHGETRLAELAATKLK--QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ ++ HG A ++++ ++EP D + FV + + SG + R I + MK
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNEIEP-DDITFVGLLSACSHSGMLDLGRHIFRSMK 466
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 150/319 (47%), Gaps = 54/319 (16%)
Query: 112 SVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE----AWKVFENMEFR 166
S+L +C L +++HA +K L Y + LI S + A VFE ++
Sbjct: 7 SLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEP 66
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
N++ WN+M FR L + + AL+L+ + G+ P+ TF +LK+C
Sbjct: 67 NLLIWNTM---FRGHALSSDPVS----------ALYLYVCMISLGLLPNCYTFPFLLKSC 113
Query: 227 AGLVTERHASAVHSLIAKYGF--------------------ED-----------DTVIAN 255
A R +H + K G+ ED D V
Sbjct: 114 AKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYT 173
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI YA G I+ ++++FD++ D+VSWN+++ YA G KEAL+LF M NV+P
Sbjct: 174 ALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRP 233
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D +T VS++SAC+ + ++ G +V HS +++HG L ++DL + G + A L
Sbjct: 234 DESTMVSVVSACAQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGL 292
Query: 373 IREMPMEPDSVIWSVLLGS 391
+ + D + W+ L+G
Sbjct: 293 FEGLSYK-DVISWNTLIGG 310
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/591 (36%), Positives = 331/591 (56%), Gaps = 29/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
YA+L +C + I+ QLH + P + L+N+Y L +A LFD
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNP---LLATKLVNLYCICNSLTNAHLLFD 60
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----H 121
+ KRN+ W +I GYA +G E L+ + Y P++F+ VL +C L
Sbjct: 61 RISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEE 120
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK +H ++ L++ V+V ALI+MY+K C + A +VF+ ++ R+V+ WNSM+A +
Sbjct: 121 GKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATY-- 178
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
++ +E+L L R + G+ P TF I + A A +H
Sbjct: 179 -----------SQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHG 227
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
++GFE + + AL+ YA+ GS+++++ +F+ + +VSWN+++ YA+HG A E
Sbjct: 228 YSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANE 287
Query: 301 ALQLFSNMN--VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
AL LF M V PD TFV +L+ACSH GL+ EG F SM+ + + P + HY CM+D
Sbjct: 288 ALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMID 347
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLG GR+ EA KLI EM +EPD+ +W LL SC+ HG + ELA KL +LEP D
Sbjct: 348 LLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGN 407
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SN+Y +G ++ +R M ++K SWIE+ N+VH F S HP+ EAI
Sbjct: 408 YVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAI 467
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +L+ +K GY P+ HD+E++ K + + HSE+LA+ F +++ + +
Sbjct: 468 YAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTK--- 524
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+KN+RIC DCH +K S + +EI +RD NR+HHFKD +CSC D+W
Sbjct: 525 -LLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/572 (38%), Positives = 333/572 (58%), Gaps = 42/572 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLI------NMYAKFGYLDD 60
+Y+ L C G ++Q +H H++++ F+ NHL+ NMYAK G LDD
Sbjct: 89 LYSKLLKECTRLGKVEQGRIVHAHLVDSH-------FLDNHLVLQNIIVNMYAKCGCLDD 141
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
AR +FDEMP +++V+WTALI+G++Q+ + LF +L+ PN F+L+S+L +
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGS 201
Query: 120 LHG----KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNS 173
HG +HA LK+ + VYV +AL++MY++ C D A F+ M ++ +SWN+
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYAR-CGHMDAAQLAFDGMPTKSEVSWNA 260
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I+ A+ E AL L ++QR+ P T+S V ACA +
Sbjct: 261 LISGH-------------ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALE 307
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH+ + K G + I N L+ YA+ GSI +K+VFD++ D+VSWN++L A
Sbjct: 308 QGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCA 367
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG KE L F M ++P+ +F+ +L+ACSH+GL+ EG F +++ + V P +
Sbjct: 368 QHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDV 426
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
HY VDLLGRVG + AE+ IREMP+EP + +W LLG+CR H L AA + +
Sbjct: 427 PHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFE 486
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
L+P DS + +SNIY +G + +RK MK S V+K P SW+EIEN VH F + +
Sbjct: 487 LDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDE 546
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HPQ + I K EE+ G++K +GYVP+TS L ++++ +EE+L +HSEKLAL FA++N
Sbjct: 547 THPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNT 606
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDL 562
+ S IRI KNIR+C DCH +K S +
Sbjct: 607 PT----GSPIRIKKNIRVCGDCHAAIKFVSKI 634
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS-LIAKYGFEDDTVIANALI 258
L+ +QR + PD+ +S +LK C L VH+ L+ + ++ V+ N ++
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
+ YA+CG + ++++FD+M D+V+W +++ ++ + + ++AL LF M +QP+
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHF 190
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T SLL A + G ++ H+ +G + + +VD+ R G + A+
Sbjct: 191 TLSSLLKASGSEHGLDPGTQL-HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 376 MPMEPDSVIWSVLL-GSCRK-HGETRLAELAATKLKQLEP 413
MP + + V W+ L+ G RK GE L L + K +P
Sbjct: 250 MPTKSE-VSWNALISGHARKGEGEHALHLLWKMQRKNFQP 288
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Query: 256 ALIHAYARCGSISLSKQV--FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
A IHA A S S +V D ++ + + K+ + G AL L ++ PD
Sbjct: 27 ATIHAPAXPFSDSNDSEVEDGDAXSFCVFQDKDLLRKSQSDGGTGLYALDLIQRGSLVPD 86
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
+ LL C+ G V++G V ++++H + L +V++ + G + +A ++
Sbjct: 87 YNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMF 146
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
EMP + D V W+ L+ ++ R A L ++ +L
Sbjct: 147 DEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQMLRL 183
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/630 (35%), Positives = 349/630 (55%), Gaps = 59/630 (9%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMIN--------------------------- 33
L ++ + L +CA K+ Q+H H++
Sbjct: 130 LLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDAR 189
Query: 34 -NFPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEE 91
F P +D+ LI YA GY++ A+ LFDE+P ++VVSW A+ISGYA+ GN +E
Sbjct: 190 KVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249
Query: 92 CFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALIN 146
LF +++ P+E ++ +V+ +C G+ VH+ +++ + N+L++
Sbjct: 250 ALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMD 309
Query: 147 MYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
+YSK C + A +FE + +++VISWN++I + M +EAL LF
Sbjct: 310 LYSK-CGELETACGLFEGLLYKDVISWNTLIGGY-------------THMNLYKEALLLF 355
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYA 262
+++ R G P+ T +L ACA L +H I K + + + +LI YA
Sbjct: 356 QEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYA 415
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
+CG I + QVF+ + + L SWN+++ +A+HG+A A +FS M ++PD TFV
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVG 475
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
LLSACS +G++ G +F +M +++ + P+L+HY CM+DLLG G EAE++I M ME
Sbjct: 476 LLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEME 535
Query: 380 PDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
PD VIW LL +C+ G L E A L ++EP + +V +SNIY +G +N+ IR
Sbjct: 536 PDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIR 595
Query: 440 KEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETS 499
+ ++K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS
Sbjct: 596 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTS 655
Query: 500 LALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLA 559
L ++EEE KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL
Sbjct: 656 EVLQEMEEEWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLI 711
Query: 560 SDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + +EI+ RD RFHHF+D +CSCNDYW
Sbjct: 712 SKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 195/419 (46%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F+ + + N++ W + G+A + +L+ C + PN ++ +
Sbjct: 81 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFL 140
Query: 114 LISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D ++V +LI++Y ++ ++A KVF+ R+V
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDV 200
Query: 169 ISWNSMIAAFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQRE 210
+S+ ++I + + A +LF A+ N +EAL LF+++ +
Sbjct: 201 VSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKT 260
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ ACA + VHS I +GF + I N+L+ Y++CG + +
Sbjct: 261 NIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETA 320
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F+ + Y D++SWN+++ Y KEAL LF M +P+ T +S+L AC+H
Sbjct: 321 CGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHL 380
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ ++D+ + G I A ++ + + W
Sbjct: 381 GAIDIG-RWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSW 438
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG A +++++ +EP D + FV + + SG + R I + M
Sbjct: 439 NAMIFGFAMHGRADAAFDIFSRMRKIGIEP-DDITFVGLLSACSRSGMLDLGRHIFRTM 496
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 54/318 (16%)
Query: 112 SVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE----AWKVFENMEFR 166
S+L +C L +L+HA +K L Y + L+ + S + A VFE ++
Sbjct: 38 SLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEP 97
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
N++ WN+M FR L + + AL L+ + G+ P+ TF +LK+C
Sbjct: 98 NLLIWNTM---FRGHALSSDPVS----------ALKLYVCMISLGLLPNSYTFPFLLKSC 144
Query: 227 AGLVTERHASAVHSLIAKYGF--------------------ED-----------DTVIAN 255
A + +H + K G+ ED D V
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYT 204
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI YA G I ++++FD++ D+VSWN+++ YA G KEAL+LF M N++P
Sbjct: 205 ALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRP 264
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D +T V+++SAC+ +G ++ G +V HS +++HG L ++DL + G + A L
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQV-HSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGL 323
Query: 373 IREMPMEPDSVIWSVLLG 390
+ + D + W+ L+G
Sbjct: 324 FEGL-LYKDVISWNTLIG 340
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/622 (35%), Positives = 345/622 (55%), Gaps = 61/622 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+T+ + G + +Q+H H++ F + +FV + L++MY+K G + AR FDE
Sbjct: 146 STMLILASKQGCVHLGLQVHGHVVKFGFQSY---VFVGSPLVDMYSKTGLVFCARQAFDE 202
Query: 68 MPKRNVV-------------------------------SWTALISGYAQHGNAEECFRLF 96
MP++NVV SWTA+I+G+ Q+G E LF
Sbjct: 203 MPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLF 262
Query: 97 CSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK- 150
+ L+ ++++ SVL +C + GK VHA ++ +++V +AL++MY K
Sbjct: 263 REMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKC 322
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A VF M +NV+SW +M+ + +A+++F M+N
Sbjct: 323 KSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN------------- 369
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ PD T V+ +CA L + + H G ++NAL+ Y +CGSI S
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDS 429
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
++F +M+Y D VSW +++ YA G+A E L+LF +M +PD TF+ +LSACS A
Sbjct: 430 HRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRA 489
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLVQ+GN++F SM++ H ++P DHY CM+DL R GR+ EA K I +MP PD++ W+
Sbjct: 490 GLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWAS 549
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL SCR H + + AA L +LEP ++ ++ +S+IY G + + +RK M+ +
Sbjct: 550 LLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGL 609
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
RK PG SWI+ +N+VH F++ + +P + I+ +LE+L ++ GYVP+ + LHD+++
Sbjct: 610 RKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDD 669
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
K + L HHSEKLA+ F ++ IR++KN+R+C DCHN K S + +EI
Sbjct: 670 SEKIKMLNHHSEKLAIAFGLI----FIPPGLPIRVVKNLRVCGDCHNATKYISKITQREI 725
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+VRD+ RFH FKD CSC D+W
Sbjct: 726 LVRDAARFHLFKDGRCSCGDFW 747
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 228/449 (50%), Gaps = 73/449 (16%)
Query: 13 HACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRN 72
H C L + + ++H H+I F N ++F+ N+L++ YAKF + AR +FD+MP+RN
Sbjct: 17 HYCELLKHCRDTKKIHCHIIKAFRNP--EIFLLNNLVSAYAKFDRITYARRVFDQMPQRN 74
Query: 73 V-------------------------------VSWTALISGYAQHGNAEECFRLFCSLLQ 101
+ VSW +LIS YA G + + + +L+
Sbjct: 75 LYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAY-NLML 133
Query: 102 YFFP---NEFSLASVLI-----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKS-- 151
Y P N +L+++LI C +L G VH +KF ++V+V + L++MYSK+
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHL-GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGL 192
Query: 152 --CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE----------- 198
CA +A F+ M +NV+ +N++IA C + +LF M+ ++
Sbjct: 193 VFCARQA---FDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGF 249
Query: 199 -------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
EA+ LFR+++ E + D TF VL AC G++ + VH+ I + ++D+
Sbjct: 250 TQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI 309
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ +AL+ Y +C SI ++ VF KM ++VSW ++L Y +G ++EA+++F +M
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN 369
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
++PD T S++S+C++ ++EG + FH G++ + +V L G+ G I +
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIED 428
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ +L EM D V W+ L+ + G+
Sbjct: 429 SHRLFSEMSY-VDEVSWTALVSGYAQFGK 456
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 107/248 (43%), Gaps = 44/248 (17%)
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
R +H I K + + N L+ AYA+ I+ +++VFD+M +L SWN++L +Y
Sbjct: 26 RDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSY 85
Query: 293 ALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN--------- 343
+ E ++F M + D ++ SL+SA + G + + K ++ ML N
Sbjct: 86 SKLACLPEMERVFHAMPTR-DMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIA 144
Query: 344 --------------------HGVVPQLDHY------ACMVDLLGRVGRILEAEKLIREMP 377
HG V + + +VD+ + G + A + EMP
Sbjct: 145 LSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMP 204
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATK--LKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
E + V+++ L+ G R + + ++ ++ DS+ + M + +G +A
Sbjct: 205 -EKNVVMYNTLIA-----GLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 436 RLIRKEMK 443
+ +EM+
Sbjct: 259 IDLFREMR 266
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/592 (36%), Positives = 347/592 (58%), Gaps = 31/592 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ AC G I+ Q+H ++ F E LFV ++L +MY+K G L DA F+E
Sbjct: 180 SSVLQACTSLGAIQFGTQVHCLVVKCGFGCE---LFVGSNLTDMYSKCGELSDACKAFEE 236
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
MP ++ V WT++I G+ ++G+ ++ + ++ F ++ L S L +C L G
Sbjct: 237 MPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFG 296
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K +HA LK + ++ NAL +MYSKS D A VF+ + IS S+ A
Sbjct: 297 KSLHATILKLGFEYETFIGNALTDMYSKS-GDMVSASNVFQ--IHSDCISIVSLTAI--- 350
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
I+ + +M E+AL F L+R G+ P+ TF+ ++KACA H S +H
Sbjct: 351 -------IDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHG 403
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K+ F+ D +++ L+ Y +CG S Q+FD++ D ++WN+++ ++ HG +
Sbjct: 404 QVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRN 463
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A++ F+ M ++P++ TFV+LL CSHAG+V++G F SM + +GVVP+ +HY+C++
Sbjct: 464 AIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVI 523
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G++ EAE I MP EP+ W LG+C+ HG+ A+ AA KL +LEP +S
Sbjct: 524 DLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSG 583
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V +SNIY + + +RK +K + K PG SW++I N+ H F HPQ++
Sbjct: 584 AHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKE 643
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++KL+ L+ Q+K +GYVP+T L D+++ KE+ L++HSE++A+ F+++ C
Sbjct: 644 IYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLT----CPTG 699
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I + KN+R+C DCH+ +K S + + I+VRD +RFHHF + CSC DYW
Sbjct: 700 MPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 207/421 (49%), Gaps = 49/421 (11%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLD 59
L T+ A L A + + QLH +I PN F++NH +N+Y+K G LD
Sbjct: 72 LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNT----FLSNHFLNLYSKCGELD 127
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD 118
LFD+M +RN+VSWT++I+G+A + +E FC + ++ +F+L+SVL +C
Sbjct: 128 YTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACT 187
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWN 172
L G VH L +K ++V + L +MYSK C + +A K FE M ++ + W
Sbjct: 188 SLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSK-CGELSDACKAFEEMPCKDAVLWT 246
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
SMI F K + ++AL + ++ + + D L AC+ L
Sbjct: 247 SMIDG-------------FVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKAS 293
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD---LVSWNSIL 289
++H+ I K GFE +T I NAL Y++ G + + VF + D +VS +I+
Sbjct: 294 SFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVF--QIHSDCISIVSLTAII 351
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
Y Q ++AL F ++ ++P+ TF SL+ AC++ ++ G+++ HG
Sbjct: 352 DGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQL-------HGQ 404
Query: 347 VPQLDH------YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
V + + + +VD+ G+ G + +L E+ PD + W+ L+G +HG R
Sbjct: 405 VVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQHGLGRN 463
Query: 401 A 401
A
Sbjct: 464 A 464
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/595 (38%), Positives = 343/595 (57%), Gaps = 39/595 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ + ACA + + Q+H + + F N+P FV L++MYAK G + A ++FD
Sbjct: 203 FSAILPACAHAALLSEGQQIHALIHKHCFLNDP---FVATALLDMYAKCGSMLLAENVFD 259
Query: 67 EMPKRNVVSWTALISGYAQ---HGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL--- 120
EMP RN+VSW ++I G+ + +G A FR SL P++ S++SVL +C L
Sbjct: 260 EMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSL----GPDQVSISSVLSACAGLVEL 315
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAA 177
GK VH +K L VYV N+L++MY K C ++A K+F R+V++WN MI
Sbjct: 316 DFGKQVHGSIVKRGLVGLVYVKNSLVDMYCK-CGLFEDATKLFCGGGDRDVVTWNVMIMG 374
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
C+ N E+A F+ + REG+ PD ++S + A A + +
Sbjct: 375 CFRCR-------------NFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTM 421
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+HS + K G ++ I+++L+ Y +CGS+ + QVF + H++V W +++ + HG
Sbjct: 422 IHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGC 481
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A EA++LF M V P+ TFVS+LSACSH G + +G K F+SM H + P L+HYA
Sbjct: 482 ANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYA 541
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLLGRVGR+ EA + I MP EPDS++W LLG+C KH + A +L +LEP
Sbjct: 542 CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPD 601
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ ++ +SNIY G +A +R+ M + VRK G SWI+++NR F + + H +
Sbjct: 602 NPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSR 661
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I+ L++L +K GYV ET A + +E +E+ L+ HSEKLAL F ++ +
Sbjct: 662 TQEIYGMLQKLKELIKRRGYVAETQFATNSVEGS-EEQSLWCHSEKLALAFGLL----VL 716
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S +RI KN+R C DCH MK AS++ +EI+VRD NRFH F + CSC DYW
Sbjct: 717 PPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 32/389 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWT 77
++K A Q+H ++ N L N L+ +YAK G + LF+ P NVV+WT
Sbjct: 112 SLKHATQIHSQLVTT--NNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWT 169
Query: 78 ALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKF 132
LI+ ++ + F + +PN F+ +++L +C + G+ +HAL K
Sbjct: 170 TLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229
Query: 133 SLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+VA AL++MY+K C A VF+ M RN++SWNSMI F KL +AI +
Sbjct: 230 CFLNDPFVATALLDMYAK-CGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGV 288
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
F ++ + + PD + S VL ACAGLV VH I K G
Sbjct: 289 FREVLS---------------LGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGL 333
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
+ N+L+ Y +CG + ++F D+V+WN ++ ++A F M
Sbjct: 334 VYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIR 393
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
V+PD A++ SL A + + +G + HS + G V + +V + G+ G +L
Sbjct: 394 EGVEPDEASYSSLFHASASIAALTQGTMI-HSHVLKTGHVKNSRISSSLVTMYGKCGSML 452
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+A ++ RE E + V W+ ++ +HG
Sbjct: 453 DAYQVFRETK-EHNVVCWTAMITVFHQHG 480
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 155/329 (47%), Gaps = 32/329 (9%)
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNEFSLASVLISCDYLHGKLVHAL 128
R V W L + Y Q G + F F S+ L++ N L S+ H +H+
Sbjct: 72 REVAFWLQLFTSY-QSGVPK--FHQFSSVPDLKHLLNNAAKLKSLK------HATQIHSQ 122
Query: 129 ALKFSLDAHVYVANALINMYSKSCADEAWKVFENM---EFRNVISWNSMIAAFRACKLEA 185
+ + A + N L+ +Y+K + + N NV++W ++I
Sbjct: 123 LVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPF 182
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
QA+ F +M+ G+ P+ TFS +L ACA +H+LI K+
Sbjct: 183 QALTFFNRMRTT-------------GIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
F +D +A AL+ YA+CGS+ L++ VFD+M + +LVSWNS++ + + A+ +F
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF 289
Query: 306 SN-MNVQPDSATFVSLLSACSHAGLVQ-EGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
+++ PD + S+LSAC AGLV+ + K H + G+V + +VD+ +
Sbjct: 290 REVLSLGPDQVSISSVLSAC--AGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC 347
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G +A KL + D V W+V++ C
Sbjct: 348 GLFEDATKLFCG-GGDRDVVTWNVMIMGC 375
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/621 (36%), Positives = 333/621 (53%), Gaps = 92/621 (14%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRN------------------------------- 72
V N L+NMYAK G L A+ +FD M RN
Sbjct: 144 VANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERD 203
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDYLH----GKLVH 126
+VSW ++I+G QHG E + F S+L+ P+ FSLAS L +C L GK +H
Sbjct: 204 IVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIH 263
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE------------------------------- 155
++ DA V NALI+MY+KS E
Sbjct: 264 GYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGD 323
Query: 156 ---AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A ++F +++ +V++W +MI + L AIE+F M +E G
Sbjct: 324 ITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSE-------------GP 370
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ T + +L A + + + H +H+ + G + NAL YA+ GSI+ +++
Sbjct: 371 RPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARK 430
Query: 273 VFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
VF+ + + D VSW S++ A A HG +EA++LF M ++PD T+V +LSAC+H G
Sbjct: 431 VFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGG 490
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV++G F M H + P L HYACMVDL GR G + EA K + MPMEPD + W L
Sbjct: 491 LVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSL 550
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L SC+ + LA++AA +L +EP +S + ++N+Y G ++ A IRK MK V+
Sbjct: 551 LSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVK 610
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K GLSW++I+N+ H F HPQ++ I+K ++++ ++K MG+ P+T LHD+E E
Sbjct: 611 KEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVE 670
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K++ L +HSEKLA+ F I++ E + +RIMKN+R+C DCHN +K S L+ +EI+
Sbjct: 671 VKDQILRYHSEKLAIAFGIIS----TPENTTLRIMKNLRVCNDCHNAIKFISKLVDREII 726
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+ RFHHFKD CSC DYW
Sbjct: 727 VRDATRFHHFKDGSCSCKDYW 747
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 199/438 (45%), Gaps = 67/438 (15%)
Query: 22 KQAMQLHEH-MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
K L H + N P + F N +++ YAK G L+ A +FD +P R+ VSWT +I
Sbjct: 22 KTGFHLDAHDLFNEMP--VKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTII 79
Query: 81 SGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLD 135
GY Q G E+ ++F +++ P +F+L +VL SC GK VH+ +K L
Sbjct: 80 VGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLH 139
Query: 136 AHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
A V VAN+L+NMY+K+ + K VF+ M+ RN SWN+MI+ C A+ F +
Sbjct: 140 ACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELL 199
Query: 195 KNEE------------------EALFLFRQLQRE-GMAPDWCTFSIVLKACAGLVTERHA 235
+ EAL F + ++ + PD + + L ACA L
Sbjct: 200 SERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFG 259
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISL-------------------------- 269
+H I + F+ + NALI YA+ G + +
Sbjct: 260 KQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYV 319
Query: 270 -------SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
++Q+F+ + D+V+W +++ Y +G +A+++F M +P+S T +
Sbjct: 320 KLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAA 379
Query: 320 LLSACSHAGLVQEGNKVFHSMLEN-HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+LSA S + G ++ S + + + P + + + + + G I A K+ +
Sbjct: 380 MLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQ 437
Query: 379 EPDSVIWSVLLGSCRKHG 396
D+V W+ ++ + +HG
Sbjct: 438 NRDTVSWTSMIMALAQHG 455
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 176/404 (43%), Gaps = 69/404 (17%)
Query: 130 LKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAF-RACKLEA-- 185
+K L VY+ N L+N+Y+K+ +A +F M + SWN++++ + + KLE
Sbjct: 2 VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61
Query: 186 QAIEL---------------FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
Q +L + +M E+A+ +F + ++ + P T + VL +CA
Sbjct: 62 QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM------------- 277
+ VHS + K G +AN+L++ YA+ G + ++K VFD+M
Sbjct: 122 SRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMIS 181
Query: 278 ------------------TYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSA 315
+ D+VSWNS++ HG EALQ FS++ +++PD
Sbjct: 182 LHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRF 241
Query: 316 TFVSLLSACSHAGLVQEGNK----VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
+ S LSAC++ + G + + +M + G V ++ + + G + A +
Sbjct: 242 SLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN-----ALISMYAKSGGVEIARR 296
Query: 372 LIREMPM-EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+I + + + D + ++ LL K G+ A LK +P D + + M Y +G
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLK--DP-DVVAWTAMIVGYVQNG 353
Query: 431 SFNKARLIRKEM--KGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
N A + K M +G R + + + + V G + H
Sbjct: 354 LNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIH 397
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A + A + ++ Q+H I + E V N L MYAK G ++ AR +F+ +
Sbjct: 378 AAMLSASSSVTSLNHGKQIHASAIRS--GEALSPSVGNALTTMYAKAGSINGARKVFNLL 435
Query: 69 PK-RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVH 126
+ R+ VSWT++I AQHG EE LF +L P+ + VL +C HG LV
Sbjct: 436 RQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACT--HGGLVE 493
Query: 127 ALALKFSLDAHVYVANALINMYS--------KSCADEAWKVFENMEFR-NVISWNSMIAA 177
F L +V+ + ++ Y+ EA+K ENM +VI+W S++++
Sbjct: 494 QGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSS 553
Query: 178 FRACK 182
+ K
Sbjct: 554 CKVYK 558
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G + N L++ YA+ G + +F++M SWN+IL YA G+ ++A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
Q+F + V+ DS ++ +++ + G ++ K+F M+++ V+P
Sbjct: 61 HQVFDLIPVR-DSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDK-VLP 105
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/625 (37%), Positives = 341/625 (54%), Gaps = 45/625 (7%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNF--PNEPQDLFVTNHLINMYAKFGYL 58
F H + YA +F H IK Q H ++ + PN F+ ++ MYA G L
Sbjct: 74 FPHPSS-YAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNA----FLAAKMVAMYASSGDL 128
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF----PNEFSLASVL 114
D A +FD + + + + ++I Y +HG + + F + F+L VL
Sbjct: 129 DSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVL 188
Query: 115 ISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVI 169
SC L G+ VH L+ L+ YV +LI+MY K +A K+F+ M R++
Sbjct: 189 KSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMA 248
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREG 211
SWN++IA + A +LF +M++ E+AL LF ++ ++G
Sbjct: 249 SWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDG 308
Query: 212 --MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
M P+W T VL ACA +H G ++ + AL YA+C S+
Sbjct: 309 SEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVE 368
Query: 270 SKQVFDKMTYH--DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
++ FD + + +L++WN+++ AYA HG EA+ +F NM VQPD+ TF+ LLS C
Sbjct: 369 ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGC 428
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH+GL+ G F+ M H V P+++HYAC+VDLLGR GR++EA++LI +MPM+ +
Sbjct: 429 SHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSV 488
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LL +CR H +AELAA +L LEP +S +V +SN+Y +G + + + +R +K
Sbjct: 489 WGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKY 548
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
++K PG SWIEI + H F K HPQ + I+K LE L ++K GY+P+TS LHD
Sbjct: 549 QGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHD 608
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
I EE KE L HSEKLA+ F ++N R V+R+ KN+RIC DCH K S +
Sbjct: 609 ISEEEKEYNLTTHSEKLAIAFGLLNT----RPGVVLRVTKNLRICGDCHAATKFISKIYE 664
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD NRFH FKD CSC DYW
Sbjct: 665 REIIVRDLNRFHCFKDGSCSCGDYW 689
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 328/559 (58%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D N LIN+Y K G D AR +FD M R++VSW +I+GY G + +LF +
Sbjct: 91 DTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMH 150
Query: 100 LQYFFPNEFSLASVLISCDYLHG----KLVHALALKFSLDAHVYVANALINMYSKS--CA 153
+ +EF+L+S + +C + K +H +ALK +LD++ +V A++++Y+K
Sbjct: 151 REGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIK 210
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D W VFE M R +++W+S+ A + L EEAL LFR QREG+
Sbjct: 211 DACW-VFEKMPERTLVTWSSLFAGYVQNGLH-------------EEALHLFRCAQREGVE 256
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
T S +L ACA L + +H++I K GF + +A +L+ YARCG I + +
Sbjct: 257 LTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYAL 316
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F M + ++V WN+++ +++ H + EA+ LF M + P+ T++S+LS CSHAGLV
Sbjct: 317 FAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLV 376
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++G F ++ + V P + HY+CMVD+LGR G+ EA +L+ +MP EP + +W LLG
Sbjct: 377 EKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLG 436
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
SCR + RLA +AA +L QLEP + V +SN+Y SG++ + RK +K S +K
Sbjct: 437 SCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKE 496
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G SWIE + +VH F G ++HP+ I+ KLEE+ +++ LHD+ E K
Sbjct: 497 MGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQK 556
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE L HHSEKLAL F +++ S I I KN+RIC DCH+FMK+A+ + + ++VR
Sbjct: 557 EELLKHHSEKLALSFGLISLPS----NIPIIIHKNLRICGDCHSFMKIAAHITERLVIVR 612
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFHHFKD CSC D+W
Sbjct: 613 DTNRFHHFKDGSCSCGDFW 631
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 145/297 (48%), Gaps = 21/297 (7%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAA 177
L GK H LA+ F L N LIN+Y+K C D A VF+ M R+++SWN+MIA
Sbjct: 74 LVGKSCHGLAIHFGLVTDTLTCNILINLYTK-CGRNDCARLVFDIMHVRSIVSWNTMIAG 132
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ + QA++LF++M REG T S + ACA
Sbjct: 133 YTHSGEDVQALKLFSRM-------------HREGTHMSEFTLSSTICACAAKYAINECKQ 179
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H++ K + ++ + A++ YA+C I + VF+KM LV+W+S+ Y +G
Sbjct: 180 LHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGL 239
Query: 298 AKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+EAL LF V+ T ++LSAC+ L EG ++ H+++ G A
Sbjct: 240 HEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQL-HAVILKCGFHGNFFVAA 298
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
+VD+ R G+I +A L M + VIW+ ++ S +H + A + K++QL
Sbjct: 299 SLVDVYARCGQIEKAYALFAYME-HKNVVIWNAMIASFSRHAHSWEAMILFEKMQQL 354
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D S L+ CA + + H L +G DT+ N LI+ Y +CG ++ VF
Sbjct: 56 DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M +VSWN+++ Y G+ +AL+LFS M T S + AC+ +
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
E K H++ + ++D+ + I +A + +MP E V WS L
Sbjct: 176 EC-KQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMP-ERTLVTWSSLFAG 233
Query: 392 CRKHG 396
++G
Sbjct: 234 YVQNG 238
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 330/556 (59%), Gaps = 26/556 (4%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-- 100
+V L +Y+K G ++ AR LF ++ + ++VS+ A+ISGY + E RLF LL
Sbjct: 243 YVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVS 302
Query: 101 --QYFFPNEFSLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCADEAW 157
+ + L V +LH + +H K + ++ V+ AL +YS+ E+
Sbjct: 303 GEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESA 362
Query: 158 KV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
++ F+ +++ SWN+MI+ + A+ E+A+ LF+++Q+ + P+
Sbjct: 363 RLLFDESSEKSLASWNAMISGY-------------AQNGLTEKAISLFQEMQKCEVRPNP 409
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T + +L ACA L VH LI + FE + ++ ALI YA+CGSI+ ++++F
Sbjct: 410 VTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSM 469
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M + V+WN+++ Y LHG EAL LF+ M V P TF+S+L ACSHAGLV+EG
Sbjct: 470 MPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREG 529
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+++F SM+ +HG P +HYACMVDLLGR G + +A IR+MP+EP +W LLG+C
Sbjct: 530 DEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACM 589
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H + LA LA+ KL +L+P + +V +SNIY ++ +A +R +K ++ K PG
Sbjct: 590 IHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGC 649
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
+ IE+ N +H F SG + HPQ AI+ LE+L G+++ G+ ET ALHD+EEE KE
Sbjct: 650 TLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELM 709
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
+ HSEKLA+ F ++ + IRI+KN+R+C+DCHN K S + + IVVRD+N
Sbjct: 710 VKVHSEKLAIAFGLITS----EPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDAN 765
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFKD ICSC DYW
Sbjct: 766 RFHHFKDGICSCGDYW 781
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 137/311 (44%), Gaps = 26/311 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
+ Q Q H +I N DL L + + +D A LF +P ++ + L
Sbjct: 22 TLHQLNQTHAQIILN--GLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVL 79
Query: 80 ISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYLHGKLVHAL-ALKFSLDA 136
I ++ + + L+ L + P+ F+ A V+ L L+ ++ +
Sbjct: 80 IRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFGS 139
Query: 137 HVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
++V +A++ Y K S A KVF+ M R+ + WN+M++ +K
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGL---------------VK 184
Query: 196 NE--EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
N +EA+ +F + + G+ D T + VL A L + L K GF +
Sbjct: 185 NSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYV 244
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV--- 310
L Y++CG I ++ +F ++ DLVS+N+++ Y + + + +++LF + V
Sbjct: 245 ITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGE 304
Query: 311 QPDSATFVSLL 321
+ +S++ V L+
Sbjct: 305 KVNSSSIVGLI 315
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G + +H+ +IN E ++FV+ LI+MYAK G + +A+ LF M
Sbjct: 413 TSILSACAQLGALSLGKWVHD-LINRESFE-SNIFVSTALIDMYAKCGSITEAQRLFSMM 470
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
P++N V+W A+ISGY HG E LF +L P + SVL +C H LV
Sbjct: 471 PEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACS--HAGLV 526
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/590 (36%), Positives = 338/590 (57%), Gaps = 37/590 (6%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
+++ P++ DL T ++ Y + G ++ AR +F+E+ + V W A+ISGY Q G
Sbjct: 225 VLDEMPDK-DDLTWTTMVVG-YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCA 282
Query: 91 ECFRLFCSLLQYFFP-NEFSLASVLISCD----YLHGKLVHA----LALKFSLDAHVYVA 141
+ F LF ++ P +EF+ SVL +C ++HGK VH L F +A + V
Sbjct: 283 DAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVN 342
Query: 142 NALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM--KNE- 197
NAL+ +YSK A ++F+ M ++V+SWN++++ + +A+E+F M KN+
Sbjct: 343 NALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDL 402
Query: 198 ---------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
E+AL LF Q++ E + P T++ + AC L +H +H+ +
Sbjct: 403 SWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHL 462
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ GFE NAL+ YA+CG+++ ++ VF M D VSWN+++ A HG +EAL
Sbjct: 463 VQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREAL 522
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF M + PD +F+++L+AC+HAGLV EG F SM + G+ P DHYA ++DL
Sbjct: 523 ELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDL 582
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR GRI EA LI+ MP EP IW +L CR +G+ AA +L ++ P +
Sbjct: 583 LGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTY 642
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
+ +SN Y +G + A +RK M+ V+K PG SWIE+ +++H F G +HP+ + ++
Sbjct: 643 ILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVY 702
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+ LE + +++ +GYVP+T LHD+E KE L+ HSEKLA+ F ++ +
Sbjct: 703 QFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLK----LPPGAT 758
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ ++KN+RIC DCH M S +G+EIVVRD RFHHFKD CSC +YW
Sbjct: 759 VTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 211/479 (44%), Gaps = 83/479 (17%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTN---------HLINMY 52
LH+ + A L HA + H ++ + +H + ++ P LF ++ L+ +
Sbjct: 47 LHARLLTADLLHAPS-HPHLTLRL-IHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAH 104
Query: 53 AKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEF 108
A G L DA FD +P +R+ V A++S +A+ A +F +LL P+++
Sbjct: 105 AAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDY 164
Query: 109 SLASVLISCDYLHG------KLVHALALKFSLDAHVYVANALINMYSKSCADEA-W---K 158
S +++ + +H +H LK A + V+NALI +Y K EA W K
Sbjct: 165 SFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARK 224
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEA 200
V + M ++ ++W +M+ + A +F ++ + +A
Sbjct: 225 VLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADA 284
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK----YGFEDDTVIANA 256
LFR++ E + D TF+ VL ACA H +VH I + + E + NA
Sbjct: 285 FELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNA 344
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA----------------------- 293
L+ Y++ G I ++K++FD M D+VSWN+IL Y
Sbjct: 345 LVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSW 404
Query: 294 -------LHGQ-AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
+HG +++AL+LF+ M +V+P T+ ++AC G ++ G ++ H+ L
Sbjct: 405 MVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL-HAHLV 463
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G ++ + + G + +A + MP DSV W+ ++ + +HG R A
Sbjct: 464 QCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSVSWNAMISALGQHGHGREA 521
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
YA AC G +K QLH H++ F N L+ MYAK G ++DAR +F
Sbjct: 439 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNS---AGNALLTMYAKCGAVNDARLVFL 495
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
MP + VSW A+IS QHG+ E LF ++ + P+ S ++L +C+ H LV
Sbjct: 496 VMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN--HAGLV 553
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVIS-WNSMIA 176
++ F + LI++ +S EA + + M F S W ++++
Sbjct: 554 DEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILS 613
Query: 177 AFR 179
R
Sbjct: 614 GCR 616
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 325/558 (58%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+FV L++MY++FG + DAR LFD+MP R+ SW A+ISGY Q+GNA E + +
Sbjct: 28 DVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMR 87
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
L+ + ++ASVL C D L GKL+H +K L+ ++V+NALINMY+K
Sbjct: 88 LEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLG 147
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A KVF + ++V+SWN++I + L ++AIE++ M+ EE + P
Sbjct: 148 HAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEII------------P 194
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T+ +L A + + + +H + K D + LI Y +CG + + +F
Sbjct: 195 NQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLF 254
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQ 331
++ + V WN+++ Y +HG ++AL+LF M V+PD TFVSLLSACSH+GLV
Sbjct: 255 YQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVS 314
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ F+ M E +G+ P L HY CMVDL GR G + A I++MP++PD+ W LL +
Sbjct: 315 DAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNA 374
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR HG L + A+ +L +++ + +V +SNIY G + +R + +RK P
Sbjct: 375 CRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNP 434
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S I + N+V F +G + HP+ E I+++L +L ++K +GYVP+ L D+EE+ KE
Sbjct: 435 GWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDEKE 494
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L HSE+LA+ + I++ ++ IRI KN+R+C DCH K S + +EI+VRD
Sbjct: 495 HILMGHSERLAIAYGIISTSP----KTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRD 550
Query: 572 SNRFHHFKDRICSCNDYW 589
S+RFHHFK CSC DYW
Sbjct: 551 SSRFHHFKGGTCSCGDYW 568
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 182/332 (54%), Gaps = 25/332 (7%)
Query: 113 VLISC-DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVIS 170
V+ +C D L GK +H L LK + V+VA +L++MYS+ +A K+F++M R+ S
Sbjct: 3 VVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGS 62
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
WN+MI+ + + N EAL + +++ EG+ D T + VL CA +
Sbjct: 63 WNAMISG-------------YCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVG 109
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+H + K+G E + ++NALI+ YA+ GS+ +++VF + D+VSWN+++
Sbjct: 110 DILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLIT 168
Query: 291 AYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA +G A EA++++ M + P+ T+VS+L A SH G +Q+G ++ +++N +
Sbjct: 169 GYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKN-CL 227
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELA 404
+ C++D+ G+ G++ +A L ++P + +SV W+ ++ H GE L
Sbjct: 228 YSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRK-NSVPWNAMISCYGVHGDGEKALELFR 286
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
K ++++P D + FV + + SG + A+
Sbjct: 287 EMKAERVKP-DHITFVSLLSACSHSGLVSDAQ 317
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/590 (35%), Positives = 335/590 (56%), Gaps = 27/590 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y +L +C + QLH + QDL L+++YA L +AR+LFD+
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDL--ATKLVHLYAVSNSLLNARNLFDK 107
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HG 122
+PK+N+ W LI GYA +G + L+ +L Y P+ F+L VL +C L G
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K + ++V ALI+MY+K C +A +VF+ + R+ + WNSM+AA+
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAY--- 224
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ + +E++ L R++ G+ P T V+ + A + + +H
Sbjct: 225 ----------AQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGF 274
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
++GF+ + + ALI YA+CGS+ ++ +F+++ +VSWN+I+ YA+HG A A
Sbjct: 275 GWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGA 334
Query: 302 LQLFSNMNVQ--PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
L LF M + PD TFV +L+ACS L+ EG +++ M+ ++G+ P + HY CM+DL
Sbjct: 335 LDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDL 394
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LG G++ EA LIR M ++PDS +W LL SC+ HG LAELA KL +LEP DS +
Sbjct: 395 LGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNY 454
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V ++N+Y SG + +R+ M R++K SWIE++N+V+ F +G H +AI+
Sbjct: 455 VILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIY 514
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+L+ L G + GY P+T HD+EE+ K + HSE+LA+ F +++ R
Sbjct: 515 AELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTR---- 570
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I KN+RIC DCH +K S ++ +EI VRD NR+H FK +CSC D+W
Sbjct: 571 LLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/655 (34%), Positives = 349/655 (53%), Gaps = 72/655 (10%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ T + LF CA K Q+H + D FV L +MY + G + D
Sbjct: 112 LIPDTHVLPNLFKVCAELSAFKAGKQIH--CVACVSGLDMDAFVQGSLFHMYMRCGRMGD 169
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY------------------ 102
AR +FD M +++VV+ +AL+ GYA+ G EE R+ + +
Sbjct: 170 ARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNR 229
Query: 103 ------------------FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYV 140
F P++ +++SVL S + G+ +H +K L V
Sbjct: 230 SGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCV 289
Query: 141 ANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE- 198
+A+++MY KS K+F+ E N+ I L +A+E+F K ++
Sbjct: 290 ISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKM 349
Query: 199 ---------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
EAL LFR++Q G+ P+ T +L AC + H +
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRS 409
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H + DD + +ALI YA+CG I +S+ VF+ M +LV WNS++ Y++HG+
Sbjct: 410 THGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGK 469
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
AKE + +F ++ ++PD +F SLLSAC GL EG K F+ M E +G+ P+L+HY+
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYS 529
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMV+LLGR G++ EA LI+E+P EPDS +W LL SCR LAE+AA KL LEP
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPE 589
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ +V MSNIY G + + IR +M+ ++K PG SWI+++N+V+ + K HPQ
Sbjct: 590 NPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQ 649
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I +K++E+ +++ G+ P AL D+EE+ +E+ L+ HSEKLA+VF ++N
Sbjct: 650 IDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNT---- 705
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + ++++KN+RIC DCH +K S G+EI +RD+NRFHHFKD ICSC D+W
Sbjct: 706 PDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 182/441 (41%), Gaps = 75/441 (17%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D +++ LI Y+ + +DA + +P V S+++LI + + +F +
Sbjct: 49 DGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMF 108
Query: 101 QY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ P+ L ++ C L GK +H +A LD +V +L +MY + C
Sbjct: 109 SHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMR-CGRM 167
Query: 154 DEAWKVFENMEFRNVISWNSMIAAF--RAC---------KLEAQAIEL-----------F 191
+A KVF+ M ++V++ ++++ + + C ++E IE F
Sbjct: 168 GDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGF 227
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+ +EA+ +F+++ G PD T S VL + +H + K G D
Sbjct: 228 NRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDK 287
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHD------------------------------ 281
+ +A++ Y + G + ++FD+ +
Sbjct: 288 CVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQ 347
Query: 282 -----LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
+VSW SI+ A +G+ EAL+LF M V+P+ T S+L AC + + G
Sbjct: 348 KMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHG 407
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ H ++ + + ++D+ + GRI ++ + MP + + V W+ L+
Sbjct: 408 RSTHGFAVRVH-LLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTK-NLVCWNSLMNGYS 465
Query: 394 KHGETR-----LAELAATKLK 409
HG+ + L T+LK
Sbjct: 466 MHGKAKEVMSIFESLMRTRLK 486
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 17/219 (7%)
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
HA LK Y++ LI YS +C ++A + +++ V S++S+I A KL
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+Q+I +F++M + G+ PD + K CA L + +H +
Sbjct: 98 SQSIGVFSRMFSH-------------GLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACV 144
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
G + D + +L H Y RCG + +++VFD+M+ D+V+ +++L YA G +E +++
Sbjct: 145 SGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRI 204
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
S M ++P+ ++ +LS + +G +E +F M
Sbjct: 205 LSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKM 243
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/600 (37%), Positives = 346/600 (57%), Gaps = 36/600 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F S+ + A+ LHG ++ +H+H + ++FV L++MYAK +
Sbjct: 11 FTFSSILSASAATMMVLHGQQLHSL-IHKHGFD------ANIFVGTALVDMYAKCADMHS 63
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCD 118
A +FD+MP+RN+VSW ++I G+ + + +F +L + PNE S++SVL +C
Sbjct: 64 AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 123
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWN 172
+ G+ VH + +KF L YV N+L++MY K C DE K+F+ + R+V++WN
Sbjct: 124 NMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFK-CRFFDEGVKLFQCVGDRDVVTWN 182
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
++ F + EEA F ++REG+ PD +FS VL + A L
Sbjct: 183 VLVMGF-------------VQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAAL 229
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+A+H I K G+ + I +LI YA+CGS+ + QVF+ + H+++SW +++ AY
Sbjct: 230 HQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAY 289
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
LHG A + ++LF +M ++P TFV +LSACSH G V+EG F+SM + H + P
Sbjct: 290 QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 349
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
+HYACMVDLLGR G + EA++ I MPM+P +W LLG+CRK+G ++ AA +L
Sbjct: 350 PEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLF 409
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
++EP + +V ++N+ SG +A +R+ M + VRK PG SWI+++N F +
Sbjct: 410 EMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHD 469
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
+ H + I+K LE+L +K GYV ET + +EE +E+ L++HSEKLAL F ++
Sbjct: 470 RSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLT 529
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S IRI KN+R C CH MKLAS + +EI+VRD NRFH F D CSC DYW
Sbjct: 530 ----LPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G P+ TFS +L A A + H +HSLI K+GF+ + + AL+ YA+C + +
Sbjct: 5 GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSH 326
+VFD+M +LVSWNS++ + + A+ +F ++ V P+ + S+LSAC++
Sbjct: 65 VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G + G +V H ++ G+VP ++D+ + E KL + + + D V W+
Sbjct: 125 MGGLNFGRQV-HGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVG-DRDVVTWN 182
Query: 387 VLL 389
VL+
Sbjct: 183 VLV 185
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/573 (38%), Positives = 332/573 (57%), Gaps = 29/573 (5%)
Query: 28 HEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG 87
H +I N P F+ NHL+NMY+K + A+ L P R+VV+WTALI+G Q+G
Sbjct: 29 HAQIIKTLDN-PLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNG 87
Query: 88 NAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVAN 142
F ++ + PN+F+ + L GK VHALA+K + V+V
Sbjct: 88 RFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGC 147
Query: 143 ALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEAL 201
+ +MYSK+ +EA K+F+ M RN+ +WN+ ++ LE + ++AL
Sbjct: 148 SAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSN---SVLEGR----------YDDAL 194
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
F + ++EG+ P S VL ACAGL +VH+L K + + +AL+ Y
Sbjct: 195 TAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMY 254
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN-----VQPDSAT 316
+CGSI +++ FD+M +LV+WN+++ YA GQA A+ LF M V P+ T
Sbjct: 255 GKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVT 314
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
FV +LSACS AG V G ++F SM +G+ P +HYAC+VDLLGR G + +A + I++M
Sbjct: 315 FVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKM 374
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
P+ P +W LLG+ + G++ L ++AA L +L+P DS V +SN++ +G + +A
Sbjct: 375 PIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEAT 434
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
L+RKEMK ++K G SWI N VH F + H + I L +L G+++ GY+P
Sbjct: 435 LVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIP 494
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFM 556
+TS AL D+EEE K ++++HSEK+AL F +++ + IRI KN+RIC DCH+ +
Sbjct: 495 DTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVP----IRITKNLRICGDCHSAI 550
Query: 557 KLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S ++G+EI+VRD+N FH F+D CSC DYW
Sbjct: 551 KFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/613 (37%), Positives = 342/613 (55%), Gaps = 42/613 (6%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA--RHLFDE 67
++ H C +I Q Q+H H+ Q FV L+ K D R +F +
Sbjct: 44 SVLHGCT---HINQVKQVHAHIFRK--GLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQ 98
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHG 122
+ N WTALI GYA G E L+ S+ Q P F+ ++L +C D G
Sbjct: 99 VEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLG 158
Query: 123 KLVHALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
+ VH + + +YV N LI+MY K C +VF+ M R+VISW S+I A+
Sbjct: 159 RQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAK 218
Query: 181 CKLEAQAIELF------------------AKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
A ELF A+ EAL +F ++Q G+ D T V
Sbjct: 219 VGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGV 278
Query: 223 LKACAGLVTERHASAVHSLIAKYGF--EDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+ ACA L ++A+ V + + GF + V+ +ALI YA+CGS+ + +VF++M
Sbjct: 279 ISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEER 338
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
++ S++S++ +A+HG A A++LF M ++P+ TF+ +L+ACSHAG+V++G ++F
Sbjct: 339 NVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLF 398
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
M E HGV P DHYACMVDLLGR GR+ EA L++ MPM P +W LLG+CR HG
Sbjct: 399 AMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGN 458
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
+A++AA+ L +LEP ++ +SNIY +G ++ +RK M+ ++K PG SW+E
Sbjct: 459 PDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVE 518
Query: 458 IENR-VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
+ +HEF +G HP+ I + LE+L+ +LK +GY P S +DI +E K+ L
Sbjct: 519 GKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMS 578
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLAL F ++ + C IRI+KN+RIC DCH+ M AS + G+EIVVRD+ RFH
Sbjct: 579 HSEKLALAFGLLTTNAGC----TIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFH 634
Query: 577 HFKDRICSCNDYW 589
HF+D CSC ++W
Sbjct: 635 HFRDGRCSCGNFW 647
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/593 (37%), Positives = 353/593 (59%), Gaps = 32/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L +AC +I+ +L +M++N EP D ++ N ++ M+ K G + DA LFDE
Sbjct: 135 YDALINACIGLKSIRGVKRLCNYMVDN-GFEP-DQYMRNRVLLMHVKCGMMIDACRLFDE 192
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF---PNEFSL---ASVLISCDYLH 121
MP RN VSW +ISGY GN E FRLF + + F+ P F+ AS + +
Sbjct: 193 MPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIF-P 251
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +H+ A+K L ++V+ ALI+MYSK + ++A VF+ M + ++ WNS+IA +
Sbjct: 252 GRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGY-- 309
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A EEAL L+ +++ G+ D TFSI+++ C+ L + A VH+
Sbjct: 310 -----------ALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHA 358
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ + GF D V AL+ Y++ G + ++ VFD+M+ +++SWN+++ Y HG +E
Sbjct: 359 SLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEE 418
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ +F M + P+ TF+++LSACS +GL + G ++F SM +H V P+ H+ACM+
Sbjct: 419 AIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMI 478
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
+LLGR G + EA LIR+ P +P + +W+ LL +CR HG L + AA KL +EP
Sbjct: 479 ELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLS 538
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
++ + NIY SG +A + + +K +R P SWIE+ N+ H F SG K H Q E
Sbjct: 539 NYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEK 598
Query: 478 IFKKLEELIGQLKGMGYVP-ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
+ K++EL+ + +GYVP E + L D++E ++ ++Y HSEKLA+ + ++N E
Sbjct: 599 VVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRMY-HSEKLAIAYGLLNT----LE 653
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ ++I+++ RIC DCH+ +KL + + +EIV+RD++RFHHF+D CSC DYW
Sbjct: 654 KTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 6/213 (2%)
Query: 188 IELFAKMKNEEEALFLFRQLQRE-GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
IE K +AL +F + E G + T+ ++ AC GL + R + + + G
Sbjct: 103 IEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNG 162
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
FE D + N ++ + +CG + + ++FD+M + VSW +I+ Y G EA +LF
Sbjct: 163 FEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFI 222
Query: 307 NMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M + TF +++ A + ++ G ++ HS G+ + ++D+ +
Sbjct: 223 LMREEFYDCGPRTFATMIRASAGLEIIFPGRQL-HSCAIKAGLGQDIFVSCALIDMYSKC 281
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G + +A + EMP + V W+ ++ HG
Sbjct: 282 GSLEDAHCVFDEMP-DKTIVGWNSIIAGYALHG 313
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/639 (36%), Positives = 341/639 (53%), Gaps = 79/639 (12%)
Query: 11 LFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+ AC + Q ++H + I N FP D+FV N LI+ YAK G +++A +F+ M
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFP----DVFVGNALIDAYAKCGLMENAVKVFNMM 326
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLF--------------------------CS---- 98
++VVSW A+++GY+Q GN E F LF CS
Sbjct: 327 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 386
Query: 99 --LLQYFF----PNEFSLASVLISCDYL----HGKLVHALALKFSL----------DAHV 138
Q F PN ++ SVL +C L G +HA +LK L D +
Sbjct: 387 NLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDL 446
Query: 139 YVANALINMYSKSCADEAWK-VFEN--MEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
V NALI+MYSK + +A + +F++ +E RNV++W MI A++LF +M
Sbjct: 447 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 506
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV--I 253
+E G+AP+ T S +L ACA L R +H+ + ++ + + +
Sbjct: 507 SEPY-----------GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV 555
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
AN LI Y++CG + ++ VFD M+ +SW S++ Y +HG+ EAL +F M
Sbjct: 556 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 615
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
PD TF+ +L ACSH G+V +G F SM ++G+ P+ +HYAC +DLL R GR+ +A
Sbjct: 616 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAW 675
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+ +++MPMEP +V+W LL +CR H LAE A KL ++ + + +SNIY +G
Sbjct: 676 RTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAG 735
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ IR MK S ++K PG SW++ + F G + HP I+ LE LI ++K
Sbjct: 736 RWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK 795
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
MGYVPET+ ALHD++EE K L HSEKLAL + ++ C IRI KN+R+C
Sbjct: 796 AMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCP----IRITKNLRVCG 851
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH+ S ++ EIVVRD +RFHHFK+ CSC YW
Sbjct: 852 DCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 184/360 (51%), Gaps = 47/360 (13%)
Query: 10 TLFHACALHGNIKQAMQLHEHMI--------NNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
++ ACA G Q ++H + + N+F E +DL V N LI+MY+K A
Sbjct: 406 SVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 465
Query: 62 RHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF---PNEFSLASVLIS 116
R +FD++P +RNVV+WT +I G+AQ+G++ + +LF ++ + PN ++++ +L++
Sbjct: 466 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 525
Query: 117 CDYLH----GKLVHALAL---KFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRN 167
C +L GK +HA L ++ A+ +VAN LI+MYSK C D A VF++M ++
Sbjct: 526 CAHLAAIRIGKQIHAYVLRHHRYESSAY-FVANCLIDMYSK-CGDVDTARHVFDSMSQKS 583
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
ISW SM+ + ++A+++F KM+ + G PD TF +VL AC+
Sbjct: 584 AISWTSMMTGYGMHGRGSEALDIFDKMR-------------KAGFVPDDITFLVVLYACS 630
Query: 228 --GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS-KQVFDKMTYHDLVS 284
G+V ++ S S+ A YG I AR G + + + V D V
Sbjct: 631 HCGMV-DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV 689
Query: 285 WNSILKAYALHGQ---AKEALQLFSNMNVQPD-SATFVSLLSACSHAGLVQEGNKVFHSM 340
W ++L A +H A+ AL MN + D S T +S + A AG ++ ++ H M
Sbjct: 690 WVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYAT--AGRWKDVARIRHLM 747
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 188/430 (43%), Gaps = 69/430 (16%)
Query: 34 NFPNEPQDLFVT-----NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN 88
+ P P + F++ ++ Y G D A + + + V W LI + + G
Sbjct: 76 SLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGR 135
Query: 89 AEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANA 143
+ + C +L+ P+ F+L VL +C Y G H L +++V++ NA
Sbjct: 136 LDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNA 195
Query: 144 LINMYSKSCA-DEAWKVFENMEFR---NVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
L+ MYS+ + +EA +F+ + R +VISWNS+++A A++LF+KM
Sbjct: 196 LVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM----- 250
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
L + + E D + +L AC L VH + G D + NALI
Sbjct: 251 TLIVHEKPTNE--RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALID 308
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ-------- 311
AYA+CG + + +VF+ M + D+VSWN+++ Y+ G + A +LF NM +
Sbjct: 309 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVT 368
Query: 312 ------------------------------PDSATFVSLLSACSHAGLVQEGNKVFHSML 341
P+ T +S+LSAC+ G +G ++ L
Sbjct: 369 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 428
Query: 342 EN---------HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGS 391
+N G L Y ++D+ + A + ++P+E +V+ W+V++G
Sbjct: 429 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 488
Query: 392 CRKHGETRLA 401
++G++ A
Sbjct: 489 HAQYGDSNDA 498
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 338/594 (56%), Gaps = 37/594 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+ AC G+++ +H+++I + D N LI+MYAK G L A+ +FD
Sbjct: 326 TSTIRACGQSGDLQVGKFVHKYLIGS--GFECDTVACNILIDMYAKCGDLLAAQEVFDTT 383
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS-----CDYLHGK 123
++ V+W +LI+GY Q G +E F + P+ + +L+S D G+
Sbjct: 384 KCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFV-LLLSIFSQLADINQGR 442
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAA---F 178
+H +KF +A + + N+L+++Y+K C D+ KVF M ++ISWN++IA+ F
Sbjct: 443 GIHCDVIKFGFEAELIIGNSLLDVYAK-CGEMDDLLKVFSYMSAHDIISWNTVIASSVHF 501
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C + Q I +++ EG+ PD T +L C+ L R +
Sbjct: 502 DDCTVGFQMIN----------------EMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H I K GFE + I NALI Y++CGS+ +VF M D+V+W +++ A+ ++G+
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
K+AL+ F +M V PDS F++ + ACSH+G+V+EG + F M ++ + P+++HYAC
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VDLL R G + +AE+ I MPM+PD+ +W LL +CR G T +A+ + K+ +L D
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +V +SNIY G +++ + +R MK ++K PG SWIEI+ RV+ F +G K Q
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQY 785
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ + LE L+ + GYV + ALHD+EE+ K + L HSE+LA+ F ++N +
Sbjct: 786 DKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNT----K 841
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + +MKN+R+C DCH K + ++ +EI+VRD+NRFH FKD CSC D+W
Sbjct: 842 PGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 197/392 (50%), Gaps = 26/392 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ ++CA +++ +HEH + DL++ N LI+MY++F LD+AR++F+E
Sbjct: 124 FPSVINSCARILDLELGCIVHEHAMEM--GFESDLYIGNALIDMYSRFVDLDNARYVFEE 181
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HG 122
M R+ VSW +LISGY +G E+ ++ + P+ F+++SVL++C L G
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH + K + V + N L++MY K EA +VF M ++ ++WN+MI +
Sbjct: 242 VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQL 301
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+++LF M +G PD + + ++AC + VH
Sbjct: 302 GRHEASVKLFMDMI--------------DGFVPDMLSITSTIRACGQSGDLQVGKFVHKY 347
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ GFE DTV N LI YA+CG + +++VFD D V+WNS++ Y G KE
Sbjct: 348 LIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEG 407
Query: 302 LQLFSNMNVQ--PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
L+ F M ++ PDS TFV LLS S + +G + H + G +L ++D+
Sbjct: 408 LESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGI-HCDVIKFGFEAELIIGNSLLDV 466
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ G + + K+ M D + W+ ++ S
Sbjct: 467 YAKCGEMDDLLKVFSYMSAH-DIISWNTVIAS 497
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 190/391 (48%), Gaps = 29/391 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ + N L++MY KF L +AR +F +M ++ V+W +I GYAQ G E +LF ++
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI 315
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD-- 154
F P+ S+ S + +C D GK VH + + N LI+MY+K C D
Sbjct: 316 DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAK-CGDLL 374
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A +VF+ + ++ ++WNS+I + + +E F MK E + P
Sbjct: 375 AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK--------------P 420
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D TF ++L + L +H + K+GFE + +I N+L+ YA+CG + +VF
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQ 331
M+ HD++SWN+++ + Q+ + M + PD AT + +L CS + +
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G ++ H + G + ++++ + G + K+ + M E D V W+ L+ +
Sbjct: 541 QGKEI-HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISA 598
Query: 392 CRKHGETR--LAELAATKLKQLEPGDSLGFV 420
+GE + L +L + P DS+ F+
Sbjct: 599 FGMYGEGKKALKAFQDMELSGVLP-DSVAFI 628
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 209/448 (46%), Gaps = 44/448 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++L + N Q +H +I + + + LI+ YA+ + +F +
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITS--GLSLSVIFSGKLISKYAQVKDPISSVSVFRSI 80
Query: 69 -PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--------PNEFSLASVLISC-- 117
P NV W ++I +G LF L Y+ P+ F+ SV+ SC
Sbjct: 81 SPTNNVYLWNSIIRALTHNG-------LFTQALGYYTEMREKKLQPDAFTFPSVINSCAR 133
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
D G +VH A++ ++ +Y+ NALI+MYS+ D A VFE M R+ +SWNS+
Sbjct: 134 ILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSL 193
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ + + E+AL ++ + + GM PD T S VL AC L+ +
Sbjct: 194 ISGYCSNGFW-------------EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
AVH +I K G D +I N L+ Y + + +++VF KM D V+WN+++ YA
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300
Query: 295 HGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G+ + +++LF +M PD + S + AC +G +Q G K H L G + D
Sbjct: 301 LGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVG-KFVHKYLIGSGF--ECDT 357
Query: 353 YAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
AC ++D+ + G +L A+++ + DSV W+ L+ + G + + +K
Sbjct: 358 VACNILIDMYAKCGDLLAAQEVFDTTKCK-DSVTWNSLINGYTQSGYYKEGLESFKMMKM 416
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLI 438
DS+ FV + +I+ N+ R I
Sbjct: 417 ERKPDSVTFVLLLSIFSQLADINQGRGI 444
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/639 (36%), Positives = 341/639 (53%), Gaps = 79/639 (12%)
Query: 11 LFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+ AC + Q ++H + I N FP D+FV N LI+ YAK G +++A +F+ M
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFP----DVFVGNALIDAYAKCGLMENAVKVFNMM 333
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLF--------------------------CS---- 98
++VVSW A+++GY+Q GN E F LF CS
Sbjct: 334 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 393
Query: 99 --LLQYFF----PNEFSLASVLISCDYL----HGKLVHALALKFSL----------DAHV 138
Q F PN ++ SVL +C L G +HA +LK L D +
Sbjct: 394 NLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDL 453
Query: 139 YVANALINMYSKSCADEAWK-VFEN--MEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
V NALI+MYSK + +A + +F++ +E RNV++W MI A++LF +M
Sbjct: 454 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 513
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV--I 253
+E G+AP+ T S +L ACA L R +H+ + ++ + + +
Sbjct: 514 SEPY-----------GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV 562
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
AN LI Y++CG + ++ VFD M+ +SW S++ Y +HG+ EAL +F M
Sbjct: 563 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 622
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
PD TF+ +L ACSH G+V +G F SM ++G+ P+ +HYAC +DLL R GR+ +A
Sbjct: 623 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAW 682
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+ +++MPMEP +V+W LL +CR H LAE A KL ++ + + +SNIY +G
Sbjct: 683 RTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAG 742
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ IR MK S ++K PG SW++ + F G + HP I+ LE LI ++K
Sbjct: 743 RWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK 802
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
MGYVPET+ ALHD++EE K L HSEKLAL + ++ C IRI KN+R+C
Sbjct: 803 AMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCP----IRITKNLRVCG 858
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH+ S ++ EIVVRD +RFHHFK+ CSC YW
Sbjct: 859 DCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 184/360 (51%), Gaps = 47/360 (13%)
Query: 10 TLFHACALHGNIKQAMQLHEHMI--------NNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
++ ACA G Q ++H + + N+F E +DL V N LI+MY+K A
Sbjct: 413 SVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 472
Query: 62 RHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF---PNEFSLASVLIS 116
R +FD++P +RNVV+WT +I G+AQ+G++ + +LF ++ + PN ++++ +L++
Sbjct: 473 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 532
Query: 117 CDYLH----GKLVHALAL---KFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRN 167
C +L GK +HA L ++ A+ +VAN LI+MYSK C D A VF++M ++
Sbjct: 533 CAHLAAIRIGKQIHAYVLRHHRYESSAY-FVANCLIDMYSK-CGDVDTARHVFDSMSQKS 590
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
ISW SM+ + ++A+++F KM+ + G PD TF +VL AC+
Sbjct: 591 AISWTSMMTGYGMHGRGSEALDIFDKMR-------------KAGFVPDDITFLVVLYACS 637
Query: 228 --GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS-KQVFDKMTYHDLVS 284
G+V ++ S S+ A YG I AR G + + + V D V
Sbjct: 638 HCGMV-DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV 696
Query: 285 WNSILKAYALHGQ---AKEALQLFSNMNVQPD-SATFVSLLSACSHAGLVQEGNKVFHSM 340
W ++L A +H A+ AL MN + D S T +S + A AG ++ ++ H M
Sbjct: 697 WVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYAT--AGRWKDVARIRHLM 754
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 188/430 (43%), Gaps = 69/430 (16%)
Query: 34 NFPNEPQDLFVT-----NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN 88
+ P P + F++ ++ Y G D A + + + V W LI + + G
Sbjct: 83 SLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGR 142
Query: 89 AEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANA 143
+ + C +L+ P+ F+L VL +C Y G H L +++V++ NA
Sbjct: 143 LDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNA 202
Query: 144 LINMYSKSCA-DEAWKVFENMEFR---NVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
L+ MYS+ + +EA +F+ + R +VISWNS+++A A++LF+KM
Sbjct: 203 LVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM----- 257
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
L + + E D + +L AC L VH + G D + NALI
Sbjct: 258 TLIVHEKPTNE--RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALID 315
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ-------- 311
AYA+CG + + +VF+ M + D+VSWN+++ Y+ G + A +LF NM +
Sbjct: 316 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVT 375
Query: 312 ------------------------------PDSATFVSLLSACSHAGLVQEGNKVFHSML 341
P+ T +S+LSAC+ G +G ++ L
Sbjct: 376 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 435
Query: 342 EN---------HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGS 391
+N G L Y ++D+ + A + ++P+E +V+ W+V++G
Sbjct: 436 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 495
Query: 392 CRKHGETRLA 401
++G++ A
Sbjct: 496 HAQYGDSNDA 505
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/561 (37%), Positives = 327/561 (58%), Gaps = 28/561 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++ V L+++Y K G+ DA +F M R+VV+W+A+++ YA++G+ E LF +
Sbjct: 109 EESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQM 168
Query: 100 -LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
L PN+ +L S L +C D G L+H + + V V AL+N+Y K
Sbjct: 169 DLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRI 228
Query: 155 EAW-KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
EA + F + +NV++W+++ AA+ A+ +A+ + ++ EG+A
Sbjct: 229 EAAAEAFGQIVEKNVVAWSAISAAY-------------ARNDRNRDAIRVLHRMDLEGLA 275
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLI--AKYGFEDDTVIANALIHAYARCGSISLSK 271
P+ TF VL ACA + + +H I G E D + AL++ Y++CG+++L+
Sbjct: 276 PNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAG 335
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+FDK+ + DLV WNS++ A HGQ ++AL+LF M +QP TF S+L ACSHAG
Sbjct: 336 NMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAG 395
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
++ +G K F S + +HG+ P+ +H+ CMVDLLGR G I+++E L+ MP EP V W
Sbjct: 396 MLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAF 455
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
LG+CR + A AA L QL+P +V +SN+Y +G ++ +R+ M+
Sbjct: 456 LGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTV 515
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K G SWIE+++RVHEF SG HP+ I +L+ L +K GYVP+T + LHD+++E
Sbjct: 516 KEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQE 575
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE + +HSEKLA+ FA++ E S IR++KN+R+C DCH K S L+ +EIV
Sbjct: 576 VKETMVGYHSEKLAMAFALLTT----PEGSPIRVVKNLRVCNDCHTASKFISKLVNREIV 631
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD NRFH F++ CSC DYW
Sbjct: 632 VRDCNRFHRFQNGACSCGDYW 652
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 203/388 (52%), Gaps = 30/388 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS- 98
++ F+ N LI++Y K DDA +F + +NV SWT +++ +A++ + + C+ F
Sbjct: 8 RNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGM 67
Query: 99 LLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK--SC 152
LLQ P E ++ L +C + G+ + L ++ V AL+++Y K C
Sbjct: 68 LLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHC 127
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A VF M R+V++W++M+AA +A+ + EAL LFRQ+ +G+
Sbjct: 128 TDAA-SVFLRMSHRDVVAWSAMVAA-------------YARNGHPREALGLFRQMDLDGV 173
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
AP+ T L ACA L R + +H + G + V+ AL++ Y +CG I + +
Sbjct: 174 APNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAE 233
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGL 329
F ++ ++V+W++I AYA + + ++A+++ M+++ P+S TFVS+L AC+
Sbjct: 234 AFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAA 293
Query: 330 VQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
+++G ++ H + G + D Y +V++ + G + A + ++ D V+W+
Sbjct: 294 LKQGRRI-HERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNS 351
Query: 388 LLGSCRKHGETR--LAELAATKLKQLEP 413
L+ + +HG+T L +L+ L+P
Sbjct: 352 LIATNAQHGQTEKALELFERMRLEGLQP 379
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 154/311 (49%), Gaps = 24/311 (7%)
Query: 139 YVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
++ N LI++Y+K C D+A VF ++ +NV SW M+AAF A+ ++
Sbjct: 11 FLCNLLIDLYTK-CDRFDDALAVFHGIQSKNVFSWTMMLAAF-------------AENRD 56
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
+ FR + +G+ P SI L AC ++ I G E+++++ A
Sbjct: 57 FDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTA 116
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPD 313
L+ Y + G + + VF +M++ D+V+W++++ AYA +G +EAL LF M+ V P+
Sbjct: 117 LVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPN 176
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T VS L AC+ G ++ G + H +E G+ + +V+L G+ GRI A +
Sbjct: 177 KVTLVSGLDACASLGDLRSG-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAF 235
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLA--ELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
++ +E + V WS + + ++ R A L L+ L P +S FV + + +
Sbjct: 236 GQI-VEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAP-NSTTFVSVLDACAAIAA 293
Query: 432 FNKARLIRKEM 442
+ R I + +
Sbjct: 294 LKQGRRIHERI 304
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
++ + ++ ACA +KQ ++HE + D++V L+NMY+K G L A +
Sbjct: 277 NSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGN 336
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDY 119
+FD++ ++V W +LI+ AQHG E+ LF + L+ P + SVL +C +
Sbjct: 337 MFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSH 393
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G+ + + N LI Y +C + VF + ++ SW +L A+A + F
Sbjct: 5 GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M + P LSAC+ A + G + ++L G+ + +V L G+
Sbjct: 65 RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAIL-GTGIEEESIVQTALVSLYGK 123
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+G +A + M D V WS ++ + ++G R A
Sbjct: 124 LGHCTDAASVFLRMS-HRDVVAWSAMVAAYARNGHPREA 161
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/555 (38%), Positives = 325/555 (58%), Gaps = 28/555 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QY 102
VTN L++MY K G AR +F M + VVSW +I G AQ+G +EE F F +L +
Sbjct: 283 VTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEG 342
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
P ++ VL++C D G VH L K LD++V V N+LI+MYSK D A
Sbjct: 343 EVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAA 402
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F N+E NV +WN+MI + A+ +EAL LF +Q +G+ D
Sbjct: 403 SIFNNLEKTNV-TWNAMILGY-------------AQNGCVKEALNLFCMMQSQGIKLDCF 448
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T V+ A A R A +H L + +++ ++ AL+ YA+CG+I ++++FD M
Sbjct: 449 TLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMM 508
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
+++WN+++ Y HG KE L LF+ M V+P+ TF+S++SACSH+G V+EG
Sbjct: 509 QERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGL 568
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+F SM E++ + P +DHY+ MVDLLGR G++ +A I+EMP++P + +LG+C+
Sbjct: 569 LLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKI 628
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H L E AA KL +L+P + V ++NIY + ++K +R M+ + K PG S
Sbjct: 629 HKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCS 688
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W+E+ N +H F SG HP+ + I+ LE L ++K GYVP+ ++HD+EE+ K++ L
Sbjct: 689 WVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPD-SIHDVEEDVKKQLL 747
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSE+LA+ F ++N + + I KN+R+C DCH+ K S + G+EI+VRD R
Sbjct: 748 SSHSERLAIAFGLLNTSP----GTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRR 803
Query: 575 FHHFKDRICSCNDYW 589
FHHFK+ CSC DYW
Sbjct: 804 FHHFKNGSCSCGDYW 818
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 187/377 (49%), Gaps = 36/377 (9%)
Query: 33 NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEE- 91
N F NE LF T +I+++ KFG +A +F+ + + V + ++ GYA++ + +
Sbjct: 73 NGFYNE--HLFQTK-VISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDA 129
Query: 92 -CF--RLFCSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANAL 144
CF R+ C ++ + A +L C D G+ +H L + +++++V A+
Sbjct: 130 LCFFLRMMCDEVRLVVGD---YACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAV 186
Query: 145 INMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
+++Y+K C D A+K+FE M+ ++++SW +++A + A+ + + AL
Sbjct: 187 MSLYAK-CRQIDNAYKMFERMQHKDLVSWTTLVAGY-------------AQNGHAKRALQ 232
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
L Q+Q G PD T +L A A + R ++H + GFE + NAL+ Y
Sbjct: 233 LVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYF 292
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
+CGS +++ VF M +VSWN+++ A +G+++EA F M P T +
Sbjct: 293 KCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+L AC++ G ++ G V H +L+ + + ++ + + R+ A + +E
Sbjct: 353 VLLACANLGDLERGWFV-HKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNN--LE 409
Query: 380 PDSVIWSVLLGSCRKHG 396
+V W+ ++ ++G
Sbjct: 410 KTNVTWNAMILGYAQNG 426
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++FV+ L++MYAK G + AR LFD M +R+V++W A+I GY HG +E LF +
Sbjct: 480 NNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEM 539
Query: 100 LQYFF-PNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA------NALINMYSKSC 152
+ PN+ + SV+ +C + G + L L S+ Y+ +A++++ ++
Sbjct: 540 QKGAVKPNDITFLSVISACSH-SGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAG 598
Query: 153 A-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D+AW + M + IS + A ACK+ + +EL E+ A LF+ EG
Sbjct: 599 QLDDAWNFIQEMPIKPGIS--VLGAMLGACKIH-KNVEL-----GEKAAQKLFKLDPDEG 650
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/590 (36%), Positives = 335/590 (56%), Gaps = 27/590 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA+L +C ++ QLH + +L + L+N Y+ L +A HLFD+
Sbjct: 61 YASLLESCISAKALEPGKQLHARLCQ--LGIAYNLDLATKLVNFYSVCNSLRNAHHLFDK 118
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HG 122
+PK N+ W LI YA +G E L+ +L+Y P+ F+L VL +C L G
Sbjct: 119 IPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEG 178
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+++H ++ + V+V AL++MY+K C +A VF+ + R+ + WNSM+AA+
Sbjct: 179 RVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAY--- 235
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ + +E+L L ++ +G+ P T V+ + A + H +H
Sbjct: 236 ----------AQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGF 285
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
++GF+ + + ALI YA+CGS+ ++ +F+++ +VSWN+I+ YA+HG A EA
Sbjct: 286 GWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEA 345
Query: 302 LQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
L LF M QPD TFV L+ACS L+ EG +++ M+ + + P ++HY CMVDL
Sbjct: 346 LDLFERMMKEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDL 405
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LG G++ EA LIR+M + PDS +W LL SC+ HG LAE+A KL +LEP DS +
Sbjct: 406 LGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNY 465
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V ++N+Y SG + +R+ M ++K SWIE++N+V+ F SG HP AI+
Sbjct: 466 VILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIY 525
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+L+ L G ++ GYVP+T HD+EE+ K + + HSE+LA+ F +++ R
Sbjct: 526 AELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTR---- 581
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I KN+RIC DCH +K S + +EI VRD NR+HHF+ +CSC DYW
Sbjct: 582 LLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/578 (37%), Positives = 334/578 (57%), Gaps = 33/578 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+F+ N LI+ YAK G L +F +P+R+VVSW ++I+ + Q G EE LF +
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
Q PN ++ VL +C D+ G+ VH+ + + + ++NA+++MY+K +
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVE 289
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---------------- 198
+A ++F+ M ++++SW +M+ + A +F M N++
Sbjct: 290 DAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGK 349
Query: 199 --EALFLFRQLQREGMA-PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL LF +LQ A PD T L ACA L +H I K G + + +
Sbjct: 350 PKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTT 409
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQP 312
+LI Y +CG + + VF + D+ W++++ A+HG K+A+ LFS M V+P
Sbjct: 410 SLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKP 469
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
++ TF ++L ACSH GLV+EG F+ M +GV+P + HYACMVD+LGR G + EA +L
Sbjct: 470 NAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVEL 529
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
I +MPM P + +W LLG+C H LAE A ++L +LEPG+ +V +SNIY +G +
Sbjct: 530 IEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKW 589
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
++ +RK M+ ++K PG S IE++ VHEF G HP + I+ KL+E++ +L+ +
Sbjct: 590 DRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETI 649
Query: 493 GYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GYVP S L +EEE KE+ L+ HSEKLA+ F +++ G + IRI+KN+R+C D
Sbjct: 650 GYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTG----QSQPIRIVKNLRVCGD 705
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH+ KL S L +EI++RD RFHHF++ CSC DYW
Sbjct: 706 CHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 212/456 (46%), Gaps = 75/456 (16%)
Query: 22 KQAMQLHEHMINN---FPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSW 76
KQ Q+H M+ F D F + LI A F LD A+ +FD++P N+ +W
Sbjct: 49 KQLKQIHAQMLRTGLFF-----DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTW 103
Query: 77 TALISGYAQHGNAEECFRLFCSLLQYF--FPNEFSLASVLISCDYLH----GKLVHALAL 130
LI YA N + +F +L FP++F+ ++ + L GK H + +
Sbjct: 104 NTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVI 163
Query: 131 KFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
K L + V++ N+LI+ Y+K C + ++VF N+ R+V+SWNSMI A
Sbjct: 164 KVLLGSDVFILNSLIHFYAK-CGELGLGYRVFVNIPRRDVVSWNSMITA----------- 211
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
F + EEAL LF++++ + + P+ T VL ACA VHS I +
Sbjct: 212 --FVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIG 269
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS------------------------ 284
+ ++NA++ Y +CGS+ +K++FDKM D+VS
Sbjct: 270 ESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAM 329
Query: 285 -------WNSILKAYALHGQAKEALQLFSNMNV----QPDSATFVSLLSACSHAGLVQEG 333
WN+++ AY G+ KEAL+LF + + +PD T VS LSAC+ G + G
Sbjct: 330 PNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLG 389
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ H ++ G+ ++D+ + G + +A + + + D +WS ++
Sbjct: 390 GWI-HVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK-DVFVWSAMIAGLA 447
Query: 394 KHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYC 427
HG + A +K+++ ++P V +NI C
Sbjct: 448 MHGHGKDAIALFSKMQEDKVKPNA----VTFTNILC 479
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 152/307 (49%), Gaps = 22/307 (7%)
Query: 103 FFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKS---CADEAWKV 159
+F N +L+ + + K +HA L+ L + A+ LI + S D A +V
Sbjct: 32 YFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQV 91
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF-RQLQREGMAPDWCT 218
F+ + N+ +WN++I A+ A N ++L +F R L + PD T
Sbjct: 92 FDQIPHPNLYTWNTLIRAY-------------ASSSNPHQSLLIFLRMLHQSPDFPDKFT 138
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F ++KA + L A H ++ K D I N+LIH YA+CG + L +VF +
Sbjct: 139 FPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIP 198
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSWNS++ A+ G +EAL+LF M NV+P+ T V +LSAC+ + G
Sbjct: 199 RRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRW 258
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
V HS +E + + L M+D+ + G + +A++L +MP E D V W+ +L K
Sbjct: 259 V-HSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVGYAKI 316
Query: 396 GETRLAE 402
GE A+
Sbjct: 317 GEYDAAQ 323
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 160/355 (45%), Gaps = 60/355 (16%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA + + +H ++ N E L ++N +++MY K G ++DA+ LFD+MP+
Sbjct: 243 VLSACAKKSDFEFGRWVHSYIERNRIGE--SLTLSNAMLDMYTKCGSVEDAKRLFDKMPE 300
Query: 71 RNVVSWT-------------------------------ALISGYAQHGNAEECFRLF--C 97
+++VSWT ALIS Y Q G +E LF
Sbjct: 301 KDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHEL 360
Query: 98 SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L + P+E +L S L +C L G +H K + + ++ +LI+MY K C
Sbjct: 361 QLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCK-CG 419
Query: 154 D--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D +A VF ++E ++V W++MIA A + ++A+ LF ++Q +
Sbjct: 420 DLQKALMVFHSVERKDVFVWSAMIAG-------------LAMHGHGKDAIALFSKMQEDK 466
Query: 212 MAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ P+ TF+ +L AC+ GLV E + + + YG ++ R G +
Sbjct: 467 VKPNAVTFTNILCACSHVGLVEEGR-TFFNQMELVYGVLPGVKHYACMVDILGRAGLLEE 525
Query: 270 SKQVFDKMTYHDLVS-WNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
+ ++ +KM S W ++L A +H A Q S + ++P + LLS
Sbjct: 526 AVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLS 580
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/600 (37%), Positives = 346/600 (57%), Gaps = 36/600 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F S+ + A+ LHG ++ +H+H + ++FV L++MYAK +
Sbjct: 246 FTFSSILSASAATMMVLHGQQLHSL-IHKHGFD------ANIFVGTALVDMYAKCADMHS 298
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCD 118
A +FD+MP+RN+VSW ++I G+ + + +F +L + PNE S++SVL +C
Sbjct: 299 AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 358
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWN 172
+ G+ VH + +K+ L YV N+L++MY K C DE K+F+ + R+V++WN
Sbjct: 359 NMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFK-CRFFDEGVKLFQCVGDRDVVTWN 417
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
++ F + EEA F ++REG+ PD +FS VL + A L
Sbjct: 418 VLVMGF-------------VQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAAL 464
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+A+H I K G+ + I +LI YA+CGS+ + QVF+ + H+++SW +++ AY
Sbjct: 465 HQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAY 524
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
LHG A + ++LF +M ++P TFV +LSACSH G V+EG F+SM + H + P
Sbjct: 525 QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 584
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
+HYACMVDLLGR G + EA++ I MPM+P +W LLG+CRK+G ++ AA +L
Sbjct: 585 PEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLF 644
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
++EP + +V ++N+ SG +A +R+ M + VRK PG SWI+++N F +
Sbjct: 645 EMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHD 704
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
+ H + I+K LE+L +K GYV ET + +EE +E+ L++HSEKLAL F ++
Sbjct: 705 RSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLT 764
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S IRI KN+R C CH MKLAS + +EI+VRD NRFH F D CSC DYW
Sbjct: 765 ----LPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 200/391 (51%), Gaps = 33/391 (8%)
Query: 20 NIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK--RNVVSW 76
++K A Q+H +I NN+ + P F+ N+LIN+YAK G L+ A LF + +V+W
Sbjct: 157 SLKHATQIHTQIIINNYTSLP---FLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTW 213
Query: 77 TALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLHGKLVHALALK 131
T+LI+ + + LF + +PN+F+ +S+L + LHG+ +H+L K
Sbjct: 214 TSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHK 273
Query: 132 FSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
DA+++V AL++MY+K CAD A +VF+ M RN++SWNSMI F L +A+
Sbjct: 274 HGFDANIFVGTALVDMYAK-CADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVG 332
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
+F + E+ + P+ + S VL ACA + VH ++ KYG
Sbjct: 333 VFKDVLREKTVI------------PNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVP 380
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
T + N+L+ Y +C ++F + D+V+WN ++ + + + +EA F M
Sbjct: 381 LTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR 440
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ PD A+F ++L + + + +G + H + G V + ++ + + G +
Sbjct: 441 REGILPDEASFSTVLHSSASLAALHQGTAI-HDQIIKLGYVKNMCILGSLITMYAKCGSL 499
Query: 367 LEAEKLIREMPMEPDSVI-WSVLLGSCRKHG 396
++A ++ +E +VI W+ ++ + + HG
Sbjct: 500 VDAYQVFEG--IEDHNVISWTAMISAYQLHG 528
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/594 (36%), Positives = 335/594 (56%), Gaps = 61/594 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +I ++ + G +D A F++M +R++V+W ++ISG+ Q G +F +
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 100 LQ--YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L+ P+ F+LASVL +C L GK +H+ + D V NALI+MYS+
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 154 ----------------------------------DEAWKVFENMEFRNVISWNSMIAAFR 179
++A +F +++ R+V++W +MI +
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ + EA+ LFR + G P+ T + +L + L + H +H
Sbjct: 390 -------------QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALHGQA 298
K G ++NALI YA+ G+I+ + + FD + D VSW S++ A A HG A
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL+LF M ++PD T+V + SAC+HAGLV +G + F M + ++P L HYAC
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDL GR G + EA++ I +MP+EPD V W LL +CR H L ++AA +L LEP +
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S + ++N+Y G + +A IRK MK RV+K G SWIE++++VH F HP++
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEK 676
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
I+ ++++ ++K MGYVP+T+ LHD+EEE KE+ L HHSEKLA+ F +++
Sbjct: 677 NEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLIS----TP 732
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+++ +RIMKN+R+C DCH +K S L+G+EI+VRD+ RFHHFKD CSC DYW
Sbjct: 733 DKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 208/469 (44%), Gaps = 89/469 (18%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
F N +++ Y+K G +D FD++P+R+ VSWT +I GY G + R+ +++
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 103 FF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--- 154
P +F+L +VL S GK VH+ +K L +V V+N+L+NMY+K C D
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK-CGDPMM 199
Query: 155 -------------EAWKV-----------------FENMEFRNVISWNSMIAAFRACKLE 184
+W FE M R++++WNSMI+ F +
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+A+++F+KM L+ ++PD T + VL ACA L +HS I
Sbjct: 260 LRALDIFSKM------------LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 245 YGFEDDTVIANALIHAYARCGSISL---------------------------------SK 271
GF+ ++ NALI Y+RCG + +K
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+F + D+V+W +++ Y HG EA+ LF +M +P+S T ++LS S
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+ G ++ S +++ G + + ++ + + G I A + + E D+V W+ +
Sbjct: 428 SLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSM 486
Query: 389 LGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
+ + +HG A EL T L + D + +V + + +G N+ R
Sbjct: 487 IIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 177/413 (42%), Gaps = 52/413 (12%)
Query: 105 PNEFSLASVLISCDYL------------HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
P SL+++L C L +LVH +K L VY+ N L+N+YSK+
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 153 -ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------- 198
A A K+F+ M R SWN++++A+ E F ++ +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 199 -----EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+A+ + + +EG+ P T + VL + A VHS I K G + +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
+N+L++ YA+CG ++K VFD+M D+ SWN+++ + GQ A+ F M + D
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM-AERD 242
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL- 372
T+ S++S + G +F ML + + P A ++ + ++ +++
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 373 --IREMPMEPDSVIWSVLLGSCRKHG--ET--RLAELAATKLKQLEPGDSLGFVQMSNIY 426
I + ++ + L+ + G ET RL E TK ++E GF + + Y
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE-----GFTALLDGY 357
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGL--------SWIEIENRVHEFASGGKR 471
G N+A+ I +K V + + S+ E N GG+R
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 213 APDWCTFSIVLKACAGLVTER--------HASAVHSLIAKYGFEDDTVIANALIHAYARC 264
AP + S +L+ C L+ + A VH + K G + N L++ Y++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSAC 324
G ++++FD+M SWN++L AY+ G + F + Q DS ++ +++
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP-QRDSVSWTTMIVGY 121
Query: 325 SHAGLVQEGNKVFHSMLENHGVVP 348
+ G + +V M++ G+ P
Sbjct: 122 KNIGQYHKAIRVMGDMVK-EGIEP 144
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/611 (37%), Positives = 340/611 (55%), Gaps = 41/611 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ L GN+++A +++ M +++ +N +I ++ K G +++A LF+E
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRM------PERNVIASNSMIVLFGKKGNVEEACKLFNE 248
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HG 122
M ++++VSW+ALIS Y Q+ EE LF + +E + SVL +C L G
Sbjct: 249 MKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITG 308
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
KLVH L +K ++ +V + NALI+MYS SC + A K+F + ISWNSMI+ +
Sbjct: 309 KLVHGLVVKVGIETYVNLQNALIHMYS-SCEEVVTAQKLFSESCCLDQISWNSMISGYVK 367
Query: 181 CKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIV 222
C +A LF M +++ E L LF+++Q EG PD V
Sbjct: 368 CGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSV 427
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
+ AC L +H+ I K G + + ++ LI+ Y + G + + +VF + +
Sbjct: 428 ISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGV 487
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+WN+++ A++G ++L+ FS M V P+ TFV++L AC H GLV EG++ F+S
Sbjct: 488 STWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNS 547
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
M++ H + P + HY CMVDLLGR G + EAE+LI MPM PD W LLG+C+K+G+
Sbjct: 548 MIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNE 607
Query: 400 LAELAATKLKQLEPGDSLGF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
E KL +L P D GF V +SNIY G++ +R M+ V K PG S IE
Sbjct: 608 TGERIGRKLVELHP-DHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEA 666
Query: 459 ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHS 518
RVHEF +G K HPQ E I L+E+ +LK GY P+T DI+EE KE L+ HS
Sbjct: 667 HGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHS 726
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
EKLA+ F ++ + IRI+KN+RIC DCH KL S +EIVVRD +RFHHF
Sbjct: 727 EKLAIAFGLI----AIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHF 782
Query: 579 KDRICSCNDYW 589
K CSC DYW
Sbjct: 783 KQGSCSCMDYW 793
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 191/464 (41%), Gaps = 98/464 (21%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLD--DARHLFDEMPKRNVVSWT 77
NIKQ Q+ MI +D F + L+ + +++ + +F + N
Sbjct: 38 NIKQFNQILSQMI--LSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICN 95
Query: 78 ALISGYAQHGNAEECFRLFCSLLQ-------YFFPNEFSLASVLISCDYLHGKLVHALAL 130
++ GY Q + + ++ +L+ Y +P F S+ ++ GK + L
Sbjct: 96 TMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLA--EFDGKCIQDHVL 153
Query: 131 KFSLDAHVYVANALINMYS--------------KSCAD------------------EAWK 158
K D+ VY+ N LINMY+ S D EA
Sbjct: 154 KVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKD 213
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEA 200
V++ M RNVI+ NSMI F +A +LF +MK + EEA
Sbjct: 214 VYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEA 273
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH- 259
L LF+++ G+ D VL AC+ L+ VH L+ K G E + NALIH
Sbjct: 274 LILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHM 333
Query: 260 ------------------------------AYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
Y +CG I ++ +FD M D VSW++++
Sbjct: 334 YSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMI 393
Query: 290 KAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA + E L LF M ++ PD VS++SAC+H + +G K H+ + +G+
Sbjct: 394 SGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQG-KWIHAYIRKNGL 452
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ ++++ ++G + +A ++ + + + S +++LG
Sbjct: 453 KINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILG 496
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 52/244 (21%)
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
++++++F ++E N N+M+ + + + +A+++++ + +A
Sbjct: 77 NQSYQIFSHIENPNGFICNTMMKGY-------------MQRNSPCKAIWVYKFMLESNVA 123
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D T+ I+ ++C+ + E + + K GF+ D I N LI+ YA CG++S +++V
Sbjct: 124 ADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKV 183
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEG 333
FD + D+VSWNS+L Y L G +EA ++ M P+ S
Sbjct: 184 FDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM---PERNVIAS-------------- 226
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
M+ L G+ G + EA KL EM + D V WS L+ SC
Sbjct: 227 --------------------NSMIVLFGKKGNVEEACKLFNEMK-QKDLVSWSALI-SCY 264
Query: 394 KHGE 397
+ E
Sbjct: 265 EQNE 268
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 309/521 (59%), Gaps = 33/521 (6%)
Query: 82 GYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDA 136
GY+++G E ++ +L P F+ ++ L +C L G+ VHA +K S
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGP 63
Query: 137 HVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
V N L+ +Y++ C +E KVF+ M RNV SWNS+I+ F K
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGF-------------VKED 110
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL +FR++QREGM W T + +L CA + +H+ I K D ++ N
Sbjct: 111 KLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLN 170
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
+L+ Y +CG + +++FD M DL SWN++L YA++G + A+ LF+ M ++P
Sbjct: 171 SLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRP 230
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D TF++LLS CSHAGL ++G K+FH M + GV P L+HYAC+VD+LGR GRI A +
Sbjct: 231 DDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVV 290
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
++ MPM+ IW LL SCR H E LAE A +L +LEP + +V +SNIY +G +
Sbjct: 291 VKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMW 350
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG----KRHPQREAIFKKLEELIGQ 488
+ ++R+ M+ R+RK G SWI+++N++H F +GG + + + I+ KL E + +
Sbjct: 351 DSVNMVREMMQTRRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEE 410
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
GY+P T + LHD+ EE K + HSE+LA VF++++ + IRI KN+R+
Sbjct: 411 F---GYIPNTDVVLHDVNEETKAMWVCGHSERLATVFSLIHTAA----GMPIRITKNLRV 463
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CVDCH+++K+ S + G+ IV+RD+NRFHHFK+ CSCNDYW
Sbjct: 464 CVDCHSWIKIVSRVTGRVIVLRDTNRFHHFKEGACSCNDYW 504
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 156/344 (45%), Gaps = 27/344 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++T ACA + +H ++ + +E D V N L+ +Y + ++ +FD+
Sbjct: 33 FSTALKACADLRELWVGRGVHAQVVKS--SEGPDQVVNNGLLRLYTQCECFNEVLKVFDQ 90
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF-SLASVLISC----DYLHG 122
MP+RNV SW +LISG+ + E +F + + + +L ++L C L G
Sbjct: 91 MPERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSG 150
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +HA +K + V V N+L++MY K D ++F+ M +++ SWN+M+ +
Sbjct: 151 KEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGY--- 207
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
AI + ++ A+ LF ++ G+ PD TF +L C AGL TE H
Sbjct: 208 -----AINGYMRV-----AMDLFNEMASCGIRPDDVTFIALLSGCSHAGL-TEDGQKLFH 256
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQA 298
+ +G L+ R G I + V M S W S+L + LH +
Sbjct: 257 RMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEV 316
Query: 299 KEALQLFSNM-NVQP-DSATFVSLLSACSHAGLVQEGNKVFHSM 340
A + + + ++P + +V L + ++AG+ N V M
Sbjct: 317 PLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMM 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 150/365 (41%), Gaps = 43/365 (11%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
T+ CA + ++H ++ + P D+ V N L++MY K G +D R LFD M
Sbjct: 135 TTILPICARVTALLSGKEIHAQIVKS-ARRP-DVLVLNSLVDMYVKCGVVDYGRRLFDGM 192
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL-----HG 122
+++ SW +++GYA +G LF + P++ + ++L C +
Sbjct: 193 RSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQ 252
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVIS-WNSMIAAFRA 180
KL H + + F + + L++M ++ D A V +NM + S W S++ +
Sbjct: 253 KLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLL---NS 309
Query: 181 CKL-------EAQAIELFA-KMKNEEEALFLFRQLQREGMAPDWCTFSIV--------LK 224
C+L EA A LF + N + L GM W + ++V ++
Sbjct: 310 CRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGM---WDSVNMVREMMQTRRIR 366
Query: 225 ACAGLVTERHASAVHSLIAKYGFE-----DDTVIANALIHAYARCGSISLSKQVFDKMTY 279
AG + + +HS +A GFE + I N L A G I + V +
Sbjct: 367 KEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLHDVNE 426
Query: 280 HDLVSW-----NSILKAYAL-HGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEG 333
W + ++L H A +++ N+ V D +++ ++S + +V
Sbjct: 427 ETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIVLRD 486
Query: 334 NKVFH 338
FH
Sbjct: 487 TNRFH 491
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/596 (36%), Positives = 328/596 (55%), Gaps = 36/596 (6%)
Query: 24 AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
A +LH +I N+ + + N L+N Y K G + DA LFD +P+R+ V+W +L++
Sbjct: 22 AKKLHAQIIKAGLNQHEP--IPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTAC 79
Query: 84 AQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL------HGKLVHALALKFSLDA 136
+ SLL F P+ F AS++ +C L GK VHA
Sbjct: 80 NLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSD 139
Query: 137 HVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
V ++LI+MY+K D VF+++ N ISW +MI+ + + +A LF +
Sbjct: 140 DDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTP 199
Query: 196 ------------------NEEEALFLFRQLQREGMA-PDWCTFSIVLKACAGLVTERHAS 236
N +A LF +++ EG++ D S V+ ACA L
Sbjct: 200 YRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGK 259
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H ++ G+E I+NALI YA+C + +K +F +M D+VSW SI+ A HG
Sbjct: 260 QMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHG 319
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
QA+EAL L+ M V+P+ TFV L+ ACSHAGLV +G +F +M+E+HG+ P L HY
Sbjct: 320 QAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHY 379
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C++DL R G + EAE LIR MP+ PD W+ LL SC++HG T++A A L L+P
Sbjct: 380 TCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKP 439
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
D ++ +SNIY +G + +RK M +K PG S I++ H F +G HP
Sbjct: 440 EDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHP 499
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
R+ I + EL +++ GY P+TS LHD++++ KE QL+ HSE+LA+ + ++
Sbjct: 500 MRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLK---- 555
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+VIRI+KN+R+C DCH +KL S + +EI VRD+ R+HHFKD CSCND+W
Sbjct: 556 AVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 161/368 (43%), Gaps = 66/368 (17%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
L K +HA +K L+ H + N L+N Y K +A ++F+ + R+ ++W S++
Sbjct: 20 LLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLT-- 77
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
AC L AL + R L G PD F+ ++KACA G++ +
Sbjct: 78 -ACNLS----------NRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGK 126
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH+ F DD V+ ++LI YA+ G + VFD ++ + +SW +++ YA G
Sbjct: 127 QVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSG 186
Query: 297 QAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKV--FHSMLE------------ 342
+ EA +LF + + + +L+S GLVQ GN V FH +E
Sbjct: 187 RKFEAFRLFRQTPYR-NLFAWTALIS-----GLVQSGNGVDAFHLFVEMRHEGISVTDPL 240
Query: 343 --------------------NHGVVPQLDHYAC------MVDLLGRVGRILEAEKLIREM 376
HGVV L + +C ++D+ + ++ A+ + EM
Sbjct: 241 VLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEM 300
Query: 377 PMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
D V W+ ++ +HG E LA L ++P + + FV + + +G +K
Sbjct: 301 -CRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNE-VTFVGLIHACSHAGLVSK 358
Query: 435 ARLIRKEM 442
R + + M
Sbjct: 359 GRTLFRTM 366
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 337/613 (54%), Gaps = 69/613 (11%)
Query: 42 LFVTNHLINMYAKF---GYLDDARHLFDEMPKRNVVSWT--------------------- 77
L V+N LI +Y K G DAR + DEMP+++ ++WT
Sbjct: 196 LSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEE 255
Query: 78 ----------ALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHG 122
A+ISGY Q G E F LF ++ + P+EF+ S+L +C +LHG
Sbjct: 256 IDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHG 315
Query: 123 KLVHA----LALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAA 177
K VH L F +A + V NAL+ +YSKS A K+F++M ++V+SWN++++
Sbjct: 316 KSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSG 375
Query: 178 FRACKLEAQAIELFAKM--KNE----------------EEALFLFRQLQREGMAPDWCTF 219
+ A +F +M K+E E+AL LF Q++ E + P T+
Sbjct: 376 YIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTY 435
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ + AC L +H +H+ + + GFE NAL+ YARCG++ ++ VF M
Sbjct: 436 AGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPN 495
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKV 336
D VSWN+++ A HG +EAL+LF M Q PD +F+++L+AC+HAGLV +G +
Sbjct: 496 VDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQY 555
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F SM + G+ P DHYA ++DLLGR GRI EA LI+ MP EP IW +L CR +G
Sbjct: 556 FESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRING 615
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ L AA +L ++ P ++ +SN Y +G + A +RK M+ V+K PG SWI
Sbjct: 616 DMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 675
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
E+ N+VH F G +HP +++ LE + +++ +GYVP+T AL D+ KE L+
Sbjct: 676 EVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFA 735
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSE+LA+ F ++ + + + ++KN++IC DCH M S +G+EIVVRD RFH
Sbjct: 736 HSERLAVSFGLLKLPA----GATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFH 791
Query: 577 HFKDRICSCNDYW 589
HFKD CSC +YW
Sbjct: 792 HFKDGECSCGNYW 804
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 195/439 (44%), Gaps = 76/439 (17%)
Query: 35 FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEEC 92
F +P + T+ L++ YA G L D+ FD +P +R+ V A+IS +A+ A
Sbjct: 83 FRADPGPVAATS-LVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPA 141
Query: 93 FRLFCSLL---QYFFPNEFSLASVLISCDYLHGKLV------HALALKFSLDAHVYVANA 143
+F SLL P+++S S+L + +H V H K A + V+NA
Sbjct: 142 VSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNA 201
Query: 144 LINMYSKSCAD----EAWKVFENMEFRNVISWNSMIAA-FRACKLEAQAIELFAKMKNE- 197
LI +Y K A +A KV + M ++ ++W +++ R + A A F ++ E
Sbjct: 202 LIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHA-ARSAFEEIDGEF 260
Query: 198 -----------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
EA LFR++ + + PD TF+ +L ACA H +VH
Sbjct: 261 DVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHG 320
Query: 241 ----LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA--- 293
L + E + NAL+ Y++ G I+++ ++FD MT D+VSWN+IL Y
Sbjct: 321 QFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESG 380
Query: 294 ---------------------------LHGQ-AKEALQLFSNM---NVQPDSATFVSLLS 322
+HG A++AL+LF+ M +V+P T+ ++
Sbjct: 381 CLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVA 440
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC G ++ G K H+ L G ++ + R G + +A + MP DS
Sbjct: 441 ACGELGALKHG-KQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP-NVDS 498
Query: 383 VIWSVLLGSCRKHGETRLA 401
V W+ ++ + +HG R A
Sbjct: 499 VSWNAMISALGQHGHGREA 517
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 152/366 (41%), Gaps = 60/366 (16%)
Query: 129 ALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEF--RNVISWNSMIAAFRACKLEA 185
A+ F D A +L++ Y+ + ++ F+++ R+ + N+MI+AF L A
Sbjct: 80 AVLFRADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAA 139
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL--VTERHASAVHSLIA 243
A+ +F + +++L PD +F+ +L A + + H + +H +
Sbjct: 140 PAVSVFRSLLASDDSL-----------RPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVH 188
Query: 244 KYGFEDDTVIANALIHAYARC---GSISLSKQVFDKMTYHDL------------------ 282
K G ++NALI Y +C G +++V D+M D
Sbjct: 189 KLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHA 248
Query: 283 -------------VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
V WN+++ Y G EA +LF M + PD TF SLLSAC++
Sbjct: 249 ARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACAN 308
Query: 327 AGLVQEGNKVFHSMLE-NHGVVPQ--LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
AG G V + VP+ L +V L + G+I A K+ M ++ D V
Sbjct: 309 AGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLK-DVV 367
Query: 384 IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
W+ +L + E+ + AA K++ L ++ M + Y G A + +M+
Sbjct: 368 SWNTILSG---YIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMR 424
Query: 444 GSRVRK 449
V+
Sbjct: 425 SEDVKP 430
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
YA AC G +K QLH H++ F N L+ MYA+ G + DAR +F
Sbjct: 435 YAGAVAACGELGALKHGKQLHAHLVQCGFEASNS---AGNALLTMYARCGAVKDARLVFL 491
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
MP + VSW A+IS QHG+ E LF ++ Q +P+ S ++L +C+ H LV
Sbjct: 492 VMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACN--HAGLV 549
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVIS-WNSMIA 176
++ F + LI++ ++ EA + + M F + W ++++
Sbjct: 550 DDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILS 609
Query: 177 AFRA---CKLEAQAIELFAKMKNEEEALFLF 204
R +L A A + KM E + ++
Sbjct: 610 GCRINGDMELGAYAADQLFKMVPEHDGTYIL 640
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/592 (37%), Positives = 340/592 (57%), Gaps = 35/592 (5%)
Query: 16 ALHGNIKQAMQLHEHMINN--FPNE------PQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A G + Q +H + I PN + + L++MYAK G L AR +FD
Sbjct: 124 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 183
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISC---DYLH- 121
MP RN V+W+ALI G+ + F LF ++L F + S+AS L +C D+L
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 243
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +HAL K + A + N+L++MY+K+ D+A +F+ M ++ +S++++++ +
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY-- 301
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ EEA +F+++Q + PD T ++ AC+ L +H H
Sbjct: 302 -----------VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ G +T I NALI YA+CG I LS+QVF+ M D+VSWN+++ Y +HG KE
Sbjct: 351 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 410
Query: 301 ALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A LF +N+ PD TF+ LLSACSH+GLV EG FH M +G+ P+++HY CMV
Sbjct: 411 ATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMV 470
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLL R G + EA + I+ MP+ D +W LLG+CR + L + + +++L P +
Sbjct: 471 DLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG 530
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
FV +SNIY +G F++A +R K +K PG SWIEI +H F G + HPQ
Sbjct: 531 NFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPE 590
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+++L+ ++ +K +GY P+TS L D+EEE KE+ L HSEKLA+ + I+ SL ++
Sbjct: 591 IYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGIL---SLSEDK 647
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ + KN+R+C DCH +K S + + I+VRD+NRFHHFK+ CSC D+W
Sbjct: 648 TIF-VTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 201/417 (48%), Gaps = 40/417 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H I+ DLFV+ L++MY K L DA H+F MP R++V+W A+++GYA H
Sbjct: 32 IHRHAIH--AGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 89
Query: 87 GNAEECFRLFCSL---LQYFFPNEFSLASVLI----SCDYLHGKLVHALAL--------- 130
G S+ + PN +L ++L G VHA +
Sbjct: 90 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRN 149
Query: 131 -KFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
K L V + AL++MY+K C A +VF+ M RN ++W+++I F C QA
Sbjct: 150 SKSKLTDGVLLGTALLDMYAK-CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
LF M + ++P + + L+ACA L R +H+L+AK G
Sbjct: 209 FLLFKAMLAQGLCF----------LSPT--SIASALRACASLDHLRMGEQLHALLAKSGV 256
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D N+L+ YA+ G I + +FD+M D VS+++++ Y +G+A+EA +F
Sbjct: 257 HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 316
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M NV+PD+AT VSL+ ACSH +Q G + H + G+ + ++D+ + G
Sbjct: 317 MQACNVEPDAATMVSLIPACSHLAALQHG-RCSHGSVIIRGLASETSICNALIDMYAKCG 375
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFV 420
RI + ++ MP D V W+ ++ HG + A ++ L P D + F+
Sbjct: 376 RIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 431
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 154/330 (46%), Gaps = 34/330 (10%)
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
PN ++ L +C D+ G+ +H A+ L A ++V+ AL++MY K +C +A +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F M R++++WN+M+A + M + A L Q+Q + P+ T
Sbjct: 68 FATMPARDLVAWNAMLAGYA-----------HHGMYHHAVAHLLSMQMQMHRLRPNASTL 116
Query: 220 SIVLKACAGLVTERHASAVHSLI----------AKYGFEDDTVIANALIHAYARCGSISL 269
+L A ++VH+ +K D ++ AL+ YA+CGS+
Sbjct: 117 VALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY 176
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP----DSATFVSLLSACS 325
+++VFD M + V+W++++ + L + +A LF M Q + S L AC+
Sbjct: 177 ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA 236
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
++ G ++ H++L GV L ++ + + G I +A L EM ++ D+V +
Sbjct: 237 SLDHLRMGEQL-HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSY 294
Query: 386 SVLLGSCRKHGETRLAELAATKLK--QLEP 413
S L+ ++G A L K++ +EP
Sbjct: 295 SALVSGYVQNGRAEEAFLVFKKMQACNVEP 324
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R +AP+ TF LKAC+ L A+H G + D ++ AL+ Y +C +
Sbjct: 3 RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 62
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ-----PDSATFVSLLSA 323
+ +F M DLV+WN++L YA HG A+ +M +Q P+++T V+LL
Sbjct: 63 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 122
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYA----------CMVDLLGRVGRILEAEKLI 373
+ G + +G V H+ + P + + ++D+ + G +L A ++
Sbjct: 123 LAQQGALAQGTSV-HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVF 181
Query: 374 REMPMEPDSVIWSVLLGS 391
MP + V WS L+G
Sbjct: 182 DAMPAR-NEVTWSALIGG 198
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/592 (37%), Positives = 340/592 (57%), Gaps = 35/592 (5%)
Query: 16 ALHGNIKQAMQLHEHMI--------NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A G + Q +H + I N+ + + L++MYAK G L AR +FD
Sbjct: 239 AQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 298
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISC---DYLH- 121
MP RN V+W+ALI G+ + F LF ++L F + S+AS L +C D+L
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 358
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +HAL K + A + N+L++MY+K+ D+A +F+ M ++ +S++++++ +
Sbjct: 359 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY-- 416
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ EEA +F+++Q + PD T ++ AC+ L +H H
Sbjct: 417 -----------VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 465
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ G +T I NALI YA+CG I LS+QVF+ M D+VSWN+++ Y +HG KE
Sbjct: 466 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 525
Query: 301 ALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A LF +N+ PD TF+ LLSACSH+GLV EG FH M +G+ P+++HY CMV
Sbjct: 526 ATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMV 585
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLL R G + EA + I+ MP+ D +W LLG+CR + L + + +++L P +
Sbjct: 586 DLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG 645
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
FV +SNIY +G F++A +R K +K PG SWIEI +H F G + HPQ
Sbjct: 646 NFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPE 705
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+++L+ ++ +K +GY P+TS L D+EEE KE+ L HSEKLA+ + I+ SL ++
Sbjct: 706 IYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGIL---SLSEDK 762
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ + KN+R+C DCH +K S L + I+VRD+NRFHHFK+ CSC D+W
Sbjct: 763 TIF-VTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 203/417 (48%), Gaps = 40/417 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H I+ DLFV+ L++MY K L DA H+F MP R++V+W A+++GYA H
Sbjct: 147 IHRHAIH--AGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 87 GNAEECFRLFCSL---LQYFFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAH-- 137
G S+ + PN +L ++L G VHA ++ L ++
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRN 264
Query: 138 --------VYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
V + AL++MY+K C A +VF+ M RN ++W+++I F C QA
Sbjct: 265 SKSKLTDGVLLGTALLDMYAK-CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 323
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
LF M + ++P + + L+ACA L R +H+L+AK G
Sbjct: 324 FLLFKAMLAQGLCF----------LSPT--SIASALRACASLDHLRMGEQLHALLAKSGV 371
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D N+L+ YA+ G I + +FD+M D VS+++++ Y +G+A+EA +F
Sbjct: 372 HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 431
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M NV+PD+AT VSL+ ACSH +Q G + H + G+ + ++D+ + G
Sbjct: 432 MQACNVEPDAATMVSLIPACSHLAALQHG-RCSHGSVIIRGLASETSICNALIDMYAKCG 490
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFV 420
RI + ++ MP D V W+ ++ HG + A ++ L P D + F+
Sbjct: 491 RIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 546
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 182/382 (47%), Gaps = 37/382 (9%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGN--AEECFRLFCSLLQY-FFPNEFSLAS 112
G+L A HLFD++P +V ++ LI Y+ A + L+ +L++ PN ++
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 113 VLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRN 167
L +C D+ G+ +H A+ L A ++V+ AL++MY K +C +A +F M R+
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
+++WN+M+A + + A+ A L Q+Q + P+ T +L A
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAV-----------AHLLSMQMQMHRLRPNASTLVALLPLLA 239
Query: 228 GLVTERHASAVHSLI----------AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
++VH+ +K D ++ AL+ YA+CGS+ +++VFD M
Sbjct: 240 QQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 299
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP----DSATFVSLLSACSHAGLVQEG 333
+ V+W++++ + L + +A LF M Q + S L AC+ ++ G
Sbjct: 300 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 359
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
++ H++L GV L ++ + + G I +A L EM ++ D+V +S L+
Sbjct: 360 EQL-HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYV 417
Query: 394 KHGETRLAELAATKLK--QLEP 413
++G A L K++ +EP
Sbjct: 418 QNGRAEEAFLVFKKMQACNVEP 439
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 322/559 (57%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D N LIN+Y K G D AR +FD M R+++SW +I+GY + E +LF +
Sbjct: 90 DTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMH 149
Query: 101 QYFFP-NEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKS--CA 153
+ EF+L+S L +C + K +H +A+K +LD+ +V A +++Y+K
Sbjct: 150 REGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIK 209
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D W VFENM + ++W+S+ A F L EE L LF+ QREGM
Sbjct: 210 DACW-VFENMPEKTSVTWSSLFAGFVQNGLH-------------EEVLCLFQSTQREGMQ 255
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
T S +L CA L + VH++I K+GF + +A +L+ YA+CG I S +V
Sbjct: 256 LTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEV 315
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F M ++V WN+++ +++ H + EA+ LF M + P+ T++S+LSACSH GLV
Sbjct: 316 FADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLV 375
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG F+ +L + P + HY+CMVD+LGR G+ EA KL+ +MP EP + +W LLG
Sbjct: 376 EEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLG 435
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
S R H RLA +AA +L +LEP + V +SN+Y SG++ + RK ++ S +K
Sbjct: 436 SSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKE 495
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G SWIE + ++H F +G + HP ++ KLEE+ +++ + + T LHD+ + K
Sbjct: 496 MGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQK 555
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE L HHSEKLA F +++ I I KN+RIC DCH+FMK+ S + ++++VR
Sbjct: 556 EELLKHHSEKLAFAFGLISLPP----NIPITIYKNLRICGDCHSFMKIVSCITERQVIVR 611
Query: 571 DSNRFHHFKDRICSCNDYW 589
D NRFHHFKD CSC D+W
Sbjct: 612 DINRFHHFKDGSCSCGDFW 630
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 25/313 (7%)
Query: 108 FSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFE 161
F+L +L C L GK H LA+ F L N LIN+Y+K C D A +VF+
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTK-CGQNDCARRVFD 115
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
M R++ISWN+MIA + + + +A++LF++M REG T S
Sbjct: 116 AMSVRSIISWNTMIAGYTHNREDVEALKLFSRM-------------HREGTQMTEFTLSS 162
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
L ACA +H++ K + + + A + YA+C I + VF+ M
Sbjct: 163 TLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKT 222
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
V+W+S+ + +G +E L LF + +Q T S+LS C+ L+ EG +V H
Sbjct: 223 SVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQV-H 281
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+++ HG L +VD+ + G+I ++ ++ +M E + V+W+ ++ S +H +
Sbjct: 282 AVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADME-EKNVVLWNAMIASFSRHAHS 340
Query: 399 RLAELAATKLKQL 411
A + K++Q+
Sbjct: 341 WEAMILFEKMQQV 353
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ CA I + Q+H ++ + ++LFV L+++YAK G ++ + +F +M
Sbjct: 262 SSILSTCASLALIIEGTQVHAVIVKH--GFHRNLFVATSLVDVYAKCGQIEKSYEVFADM 319
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVHA 127
++NVV W A+I+ +++H ++ E LF + Q FPNE + S+L +C H LV
Sbjct: 320 EEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACS--HTGLVEE 377
Query: 128 LALKFSL-------DAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVIS-WNSMIAAF 178
F+L + +V + ++++ +S DEAWK+ + M F S W S++ +
Sbjct: 378 GRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSS 437
Query: 179 R 179
R
Sbjct: 438 R 438
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 5/185 (2%)
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T +L+ CA + + H L +G DTV N LI+ Y +CG +++VF
Sbjct: 55 DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQ 331
D M+ ++SWN+++ Y + + EAL+LFS M+ Q T S L AC+ +
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
E K H++ + +D+ + I +A + MP E SV WS L
Sbjct: 175 EC-KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP-EKTSVTWSSLFAG 232
Query: 392 CRKHG 396
++G
Sbjct: 233 FVQNG 237
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/560 (39%), Positives = 336/560 (60%), Gaps = 30/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D +N L+NMY+K G ++ AR LFDEMP R++VSW ++ + Q+G+ E+ LF +
Sbjct: 54 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 113
Query: 101 QYFFP-NEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ +EF+++SV+ +C K +H ALK +LD++V+V AL+++Y+K
Sbjct: 114 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 173
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGM 212
+A VFE M R+ ++W+SM+A + ++NE EEAL LF + Q G+
Sbjct: 174 DANLVFECMPERSDVTWSSMVAGY---------------VQNELYEEALVLFHRAQAMGL 218
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ T S L ACA V ++ K G + + ++LI YA+CG I +
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGL 329
VF + ++V WN+IL ++ H ++ EA+ F M + P+ T++S+LSACSH GL
Sbjct: 279 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 338
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V++G K F M+ H V P + HY+CMVD+LGR G + EA+ I MP + + +W LL
Sbjct: 339 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 398
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
SCR + LAE+AA L ++EP ++ V +SNIY + + + R +K S+ +K
Sbjct: 399 ASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKK 458
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWIEI+++VH F G + HP+ I+ KLE+L+G++K +GY +T LHD+EE
Sbjct: 459 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 518
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K+E L HHSEKLAL F IM + + IRIMKN+RIC DCH+FMKLAS + +EI+V
Sbjct: 519 KQELLRHHSEKLALTFGIM----VLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIV 574
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFK+ CSC ++W
Sbjct: 575 RDTNRFHHFKNGYCSCGEFW 594
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 21/302 (6%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ G HA ++ L A +N L+NMYSK + A K+F+ M R+++SWN+M+ +
Sbjct: 37 IEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGS- 95
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ + E+AL LF Q+Q+EG + T S V+ ACA +
Sbjct: 96 ------------HTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQL 143
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H K + + + AL+ YA+CG + + VF+ M V+W+S++ Y +
Sbjct: 144 HGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELY 203
Query: 299 KEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL LF M ++ + T S LSAC+ + EG +V ++ G+ + +
Sbjct: 204 EEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQV-QAVSCKTGIGSNIFVISS 262
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE--P 413
++D+ + G I EA + + E + V+W+ +L +H + A + K++Q+ P
Sbjct: 263 LIDMYAKCGIIEEAYTVFSSVE-EKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICP 321
Query: 414 GD 415
D
Sbjct: 322 ND 323
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/560 (39%), Positives = 336/560 (60%), Gaps = 30/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D +N L+NMY+K G ++ AR LFDEMP R++VSW ++ + Q+G+ E+ LF +
Sbjct: 81 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 140
Query: 101 QYFFP-NEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ +EF+++SV+ +C K +H ALK +LD++V+V AL+++Y+K
Sbjct: 141 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 200
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGM 212
+A VFE M R+ ++W+SM+A + ++NE EEAL LF + Q G+
Sbjct: 201 DANLVFECMPERSDVTWSSMVAGY---------------VQNELYEEALVLFHRAQAMGL 245
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ T S L ACA V ++ K G + + ++LI YA+CG I +
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGL 329
VF + ++V WN+IL ++ H ++ EA+ F M + P+ T++S+LSACSH GL
Sbjct: 306 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 365
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V++G K F M+ H V P + HY+CMVD+LGR G + EA+ I MP + + +W LL
Sbjct: 366 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 425
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
SCR + LAE+AA L ++EP ++ V +SNIY + + + R +K S+ +K
Sbjct: 426 ASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKK 485
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWIEI+++VH F G + HP+ I+ KLE+L+G++K +GY +T LHD+EE
Sbjct: 486 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 545
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K+E L HHSEKLAL F IM + + IRIMKN+RIC DCH+FMKLAS + +EI+V
Sbjct: 546 KQELLRHHSEKLALTFGIM----VLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIV 601
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFK+ CSC ++W
Sbjct: 602 RDTNRFHHFKNGYCSCGEFW 621
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 21/302 (6%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ G HA ++ L A +N L+NMYSK + A K+F+ M R+++SWN+M+ +
Sbjct: 64 IEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGS- 122
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ + E+AL LF Q+Q+EG + T S V+ ACA +
Sbjct: 123 ------------HTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQL 170
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H K + + + AL+ YA+CG + + VF+ M V+W+S++ Y +
Sbjct: 171 HGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELY 230
Query: 299 KEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL LF M ++ + T S LSAC+ + EG +V ++ G+ + +
Sbjct: 231 EEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQV-QAVSCKTGIGSNIFVISS 289
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE--P 413
++D+ + G I EA + + E + V+W+ +L +H + A + K++Q+ P
Sbjct: 290 LIDMYAKCGIIEEAYTVFSSVE-EKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICP 348
Query: 414 GD 415
D
Sbjct: 349 ND 350
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/561 (37%), Positives = 327/561 (58%), Gaps = 28/561 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++ V L++MY K G+ DA +F M R+VV+W+A+++ YA++G+ E LF +
Sbjct: 94 EESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQM 153
Query: 100 -LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
L PN+ +L S L +C D G L+H + + V V AL+N+Y K
Sbjct: 154 DLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRI 213
Query: 155 EAW-KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
EA + F + +NV++W+++ AA+ A+ +A+ + ++ EG+
Sbjct: 214 EAAVEAFGQIVEKNVVAWSAISAAY-------------ARNDRNRDAIRVLHRMDLEGLV 260
Query: 214 PDWCTFSIVLKACAGLVTERHASAVH--SLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
P+ TF VL ACA + + +H + + G E D + AL++ Y++CG+++L+
Sbjct: 261 PNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAG 320
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+FDK+ + DLV WNS++ A HGQ ++AL+LF M +QP TF S+L ACSHAG
Sbjct: 321 DMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAG 380
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
++ +G K F S + +HG+ P+ +H+ CMVDLLGR G I+++E L+ MP EP V W
Sbjct: 381 MLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAF 440
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
LG+CR + A AA L QL+P +V +SN+Y +G ++ +R+ M+
Sbjct: 441 LGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTV 500
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K G SWIE+++RVHEF SG HP+ I +L+ L +K GYVP+T + LHD+++E
Sbjct: 501 KEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQE 560
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE + +HSEKLA+ FA++ E S IR++KN+R+C DCH K S L+ +EIV
Sbjct: 561 VKEIMVGYHSEKLAMAFALLTT----PEGSPIRVVKNLRVCNDCHTASKFISKLVNREIV 616
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD NRFH F++ CSC DYW
Sbjct: 617 VRDCNRFHRFQNGACSCGDYW 637
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 198/380 (52%), Gaps = 30/380 (7%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPN 106
+++ Y++ G + R FDEMP ++VSW ALI+ Y + + + C+ F LLQ P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 107 EFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK--SCADEAWKVF 160
E ++ L +C + G+ + L ++ V AL++MY K C D A VF
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAA-SVF 119
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
M R+V++W++M+AA +A+ + EAL LFRQ+ +G+AP+ T
Sbjct: 120 LRMSHRDVVAWSAMVAA-------------YARNGHPREALGLFRQMDLDGVAPNKVTLV 166
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
L ACA L R + +H + G + V+ AL++ Y +CG I + + F ++
Sbjct: 167 SGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEK 226
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVF 337
++V+W++I AYA + + ++A+++ M+++ P+S TFVS+L AC+ +++G ++
Sbjct: 227 NVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRI- 285
Query: 338 HSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
H + G + D Y +V++ + G + A + ++ D V+W+ L+ + +H
Sbjct: 286 HERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIA-HLDLVLWNSLIATNAQH 344
Query: 396 GETR--LAELAATKLKQLEP 413
G+T L +L+ L+P
Sbjct: 345 GQTEKALELFERMRLEGLQP 364
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 140/291 (48%), Gaps = 21/291 (7%)
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K F+ M +++SWN++IAA+ ++ + FR + +G+ P
Sbjct: 16 KAFDEMPVADIVSWNALIAAY-------------IGNRDFDRCWLFFRGMLLQGINPGEV 62
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
SI L AC ++ I G E+++++ AL+ Y + G + + VF +M
Sbjct: 63 GISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRM 122
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
++ D+V+W++++ AYA +G +EAL LF M+ V P+ T VS L AC+ G ++ G
Sbjct: 123 SHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSG- 181
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ H +E G+ + +V+L G+ GRI A + ++ +E + V WS + + +
Sbjct: 182 ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI-VEKNVVAWSAISAAYAR 240
Query: 395 HGETRLA--ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ R A L L+ L P +S FV + + + + R I + +
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVP-NSTTFVSVLDACAAIAALKQGRRIHERTQ 290
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ ++ + ++ ACA +KQ ++HE D++V L+NMY+K G L
Sbjct: 259 LVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLAL 318
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDY 119
A +FD++ ++V W +LI+ AQHG E+ LF + L+ P + SVL +C +
Sbjct: 319 AGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSH 378
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 329/559 (58%), Gaps = 32/559 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+V LI++Y+K G ++ AR LF + + +++++ A+ISG+ +G E +LF LL
Sbjct: 245 YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELL-- 302
Query: 103 FFPNEFSLASVLISCDYLHGKL--------VHALALKFSLDAHVYVANALINMYSK-SCA 153
F E +S ++ LH +H +K + + V+ A +Y+K +
Sbjct: 303 -FSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEI 361
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D A +F+ + V++WN+MI+ + + + E A+ LF+++ +
Sbjct: 362 DLARHLFDESPEKTVVAWNAMISGY-------------TQNGSTETAISLFKEMMKTEFT 408
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T + +L ACA L + VH LI E + ++ AL+ YA+CG+IS + Q+
Sbjct: 409 PNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQL 468
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD M+ + V+WN+++ Y LHG EAL+L++ M P + TF+S+L ACSHAGLV
Sbjct: 469 FDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLV 528
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG ++FH+M+ + + P ++HYACMVD+LGR G++ +A + I++MP+EP +W LLG
Sbjct: 529 GEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLG 588
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+C H +T +A LA+ +L +L+PG +V +SNIY + +F KA IR+ +K ++ K
Sbjct: 589 ACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKS 648
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG + IE+ H F SG + H I+ KLE+L G+++ MGY ET ALHD+EEE K
Sbjct: 649 PGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEK 708
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E + HSEKLA+ F ++ + IRI+KN+R+C+DCH K S + + IVVR
Sbjct: 709 ELAVNVHSEKLAIAFGLITT----EPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVR 764
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFHHFKD ICSC DYW
Sbjct: 765 DANRFHHFKDGICSCGDYW 783
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 166/369 (44%), Gaps = 24/369 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL L F AR LF +PK ++ + L+ G++ + + L+ L
Sbjct: 43 DLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLR 102
Query: 101 QY--FFPNEFSLASVLISC-DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
+ P+ F+ A + +C + H L+HA ++ ++V+V +AL+++Y K S A
Sbjct: 103 RNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYA 162
Query: 157 WKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
KVF+ M R+ + WN+MI + C + +++ LFR++ +G+ D
Sbjct: 163 RKVFDGMPERDTVLWNTMINGLVKNCCFD--------------DSIQLFREMVADGVRVD 208
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T + VL A A L + + L K GF + LI Y++CG ++ ++ +F
Sbjct: 209 SSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFR 268
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
++ DL+++N+++ + +G + +++LF + + S+T V L+ S G +
Sbjct: 269 RINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHL 328
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ H G++ + ++ I A L E P E V W+ ++
Sbjct: 329 ACSI-HGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP-EKTVVAWNAMISGY 386
Query: 393 RKHGETRLA 401
++G T A
Sbjct: 387 TQNGSTETA 395
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F + T+ ACA G++ +H H+I + EP +++V+ L++MYAK G + +
Sbjct: 407 FTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLEP-NIYVSTALVDMYAKCGNISE 464
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
A LFD M ++N V+W +I GY HG E +L+ +L + P+ + SVL +C
Sbjct: 465 AWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACS- 523
Query: 120 LHGKLV 125
H LV
Sbjct: 524 -HAGLV 528
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 342/618 (55%), Gaps = 55/618 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + ACA ++ QLH +I + P D +V + LI +YAK G +A+ +
Sbjct: 270 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQ--IDPYVASALIELYAKCGSFKEAKRV 327
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-----QYFFPNEFSLASVLISC-- 117
F+ + RN VSWT LI G Q+ ECF L + ++F+LA+++ C
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQY----ECFSKSVELFNQMRAELMAIDQFALATLISGCFN 383
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
D G+ +H+L LK + + V+N+LI++Y+K C D A VF +M R+++SW S
Sbjct: 384 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAK-CGDLQNAEFVFSSMSERDIVSWTS 442
Query: 174 MIAAFRACKLEAQAIELFAKMKN------------------EEEALFLFR-QLQREGMAP 214
MI A+ +A E F M EE+ L ++ L ++ + P
Sbjct: 443 MITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 502
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
DW T+ + + CA + + + K G + +ANA I Y++CG IS ++++F
Sbjct: 503 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 562
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D + D+VSWN+++ Y+ HG K+A + F +M +PD ++V++LS CSH+GLVQ
Sbjct: 563 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F M HG+ P L+H++CMVDLLGR G + EA+ LI +MPM+P + +W LL +
Sbjct: 623 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ HG LAELAA + +L+ DS ++ ++ IY +G + + +RK M+ ++K P
Sbjct: 683 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 742
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+E+EN+VH F + HPQ AI KL+EL+ ++ +GYV E +
Sbjct: 743 GYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVR---------TESPRS 793
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E HHSEKLA+ F IM+ + I IMKN+RIC DCH +KL S + +E V+RD
Sbjct: 794 E--IHHSEKLAVAFGIMSLPAWMP----IHIMKNLRICGDCHTVIKLISSVTDREFVIRD 847
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHFK CSC DYW
Sbjct: 848 GVRFHHFKSGSCSCGDYW 865
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 191/450 (42%), Gaps = 74/450 (16%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL HA G + A +L I EP ++ N ++N YAK G L DA LFD MP
Sbjct: 44 TLLHAYFSCGALSDARRLLRADIK----EP-NVITHNIMMNGYAKQGSLSDAEELFDRMP 98
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYLHGKLVH- 126
+R+V SW L+SGY Q + F S+ + PN F+ V+ SC L + +
Sbjct: 99 RRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAP 158
Query: 127 ---ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
L KF V AL++M+ + D A ++F +E + NSM+A +
Sbjct: 159 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 218
Query: 183 LEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLK 224
AIE F M + EAL L ++ R+G+ D T++ L
Sbjct: 219 GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLT 278
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA L + +H+ + + + D +A+ALI YA+CGS +K+VF+ + + VS
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSAC----------------- 324
W ++ + ++++LF+ M + D +L+S C
Sbjct: 339 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398
Query: 325 ------------------SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ G +Q VF SM E V + M+ ++G I
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIV-----SWTSMITAYSQIGNI 453
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++A + M +++ W+ +LG+ +HG
Sbjct: 454 IKAREFFDGMDTR-NAITWNAMLGAYIQHG 482
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD-KMTYHD 281
L++C A A+H + G + N L+HAY CG++S ++++ + +
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
+++ N ++ YA G +A +LF M + D A++ +L+S A +G + F SM
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMP-RRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 342 ENHGVVPQLDHYACMVDLLGRVG 364
+ +P + C++ G +G
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALG 152
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/580 (36%), Positives = 325/580 (56%), Gaps = 32/580 (5%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A +L E + +++ N L Y K G L AR LFDEMP+RNV +W A
Sbjct: 152 GDLTAARELFERIPR------RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNA 205
Query: 79 LISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFS 133
+++G G EE F + + P+EF L SV C D + G+ VHA ++
Sbjct: 206 MVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG 265
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
LD + V ++L +MY + C E V + +++S N++IA
Sbjct: 266 LDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGR-------------T 312
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ + E AL F ++ G+A D TF + +C+ L +H + K G +
Sbjct: 313 QNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 372
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ L+H Y+RCG + S++VF D ++++ AY HG ++A++LF M
Sbjct: 373 VMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGG 432
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+P TF++LL ACSH+GL +EG F M + +G+ P + HY C+VDLLGR G + EA
Sbjct: 433 AEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEA 492
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
E LI MP+ PD VIW LL +C+ +AE A ++ +L+P DS +V +SNI S
Sbjct: 493 EALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATS 552
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
+ +RK M+ + VRK PG+SW+E++ +H+F +G + HP+++ I + LEE++ ++
Sbjct: 553 RRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKI 612
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRIC 549
+ GY P+ S+ LHD+E+E KE L HHSEKLA+ FA ++ E IR+MKN+R+C
Sbjct: 613 RQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLS----LPEGVPIRVMKNLRVC 668
Query: 550 VDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +KL S + G+EIVVRD +RFHHFKD CSC DYW
Sbjct: 669 DDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +HA A + AN L+ Y+ A ++FE + RNV+SWN + +
Sbjct: 123 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 182
Query: 182 KLEAQAIELFAKMKN------------------EEEALFLFRQLQREGMAPDWCTFSIVL 223
A +LF +M +EE+L F ++REGM PD V
Sbjct: 183 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 242
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
+ CAGL VH+ + + G + D + ++L H Y RCG + + V + +V
Sbjct: 243 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 302
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
S N+I+ +G ++ AL+ F M V D TFVS +S+CS + +G ++ H
Sbjct: 303 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI-HGQ 361
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ GV + C+V + R G + ++E++
Sbjct: 362 VMKAGVDKVVPVMTCLVHMYSRCGCLGDSERV 393
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 25/322 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++F CA ++ Q+H +++ + + +D+ V + L +MY + G L + + +
Sbjct: 239 GSVFRCCAGLRDVVTGRQVHAYVVRSGLD--RDMCVGSSLAHMYMRCGCLQEGEAVLRML 296
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISCDYL----HGK 123
P ++VS +I+G Q+G++E FC + + + S + SC L G+
Sbjct: 297 PSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQ 356
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H +K +D V V L++MYS+ C ++ +VF + ++MI+A+
Sbjct: 357 QIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHG 416
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+AIELF +M N G P TF +L AC+ + L+
Sbjct: 417 HGQKAIELFKQMMN-------------GGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 463
Query: 243 AK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKE 300
K YG + ++ R G + ++ + M D V W ++L A
Sbjct: 464 TKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDM 523
Query: 301 ALQLFSN-MNVQP-DSATFVSL 320
A ++ + + P DSA++V L
Sbjct: 524 AERIAKRVIELDPHDSASYVLL 545
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS + +AC L R +H+ A G D AN L+ AYA G ++ ++++F+++
Sbjct: 109 FSHLFRACRALRPLRQ---LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+++SWN + Y +G A +LF M + + AT+ ++++ ++ G +E F
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMP-ERNVATWNAMVAGLTNLGFDEESLGFFL 224
Query: 339 SM 340
M
Sbjct: 225 DM 226
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/615 (36%), Positives = 349/615 (56%), Gaps = 39/615 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L ++CA +++ ++H H+I + DLFV N LI++Y+ FG L+ AR LFDE
Sbjct: 114 FPFLLNSCARLSSLEPGHEVHSHIIKH--GFESDLFVRNALIHLYSVFGNLNLARTLFDE 171
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----G 122
R++VS+ +I GYA+ E LF + P+EF+ ++ C L+ G
Sbjct: 172 SLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVG 231
Query: 123 KLVHALALK--FSLDAHVYVANALINMYSK-SCADEAWKVFENM-EFRNVISWNSMIAAF 178
K +HA K S+D+++ + +A+++MY+K + A +VF M ++ +W+SM+ +
Sbjct: 232 KQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGY 291
Query: 179 RACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFS 220
C A +LF M + EAL LF++++ G+ PD T
Sbjct: 292 ARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLV 351
Query: 221 IVLKACAGL-VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
VL ACA L + H I F +T++ A++ YA+CGSI + ++F ++
Sbjct: 352 AVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGK 411
Query: 280 HDLVSW--NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ + NS++ A HG + A+ +F + ++PD TFV +L AC H+GL++EG
Sbjct: 412 NMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGK 471
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
K+F SM +G+ PQ++HY CMVDLLGR G + EA L+++MP E +SVIW LL +CR
Sbjct: 472 KLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRT 531
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG ++ E+A KL ++E +V +SNI + + +AR +RK M+ +RK PG S
Sbjct: 532 HGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWS 591
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
+IE+ +H F + K HPQ + I L+++ +LK GYVP T+ + DI+EE KE +
Sbjct: 592 YIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVV 651
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
+HSEKLAL F +M C IRI+KN+RIC DCH KL S++ G+EI VRD+ R
Sbjct: 652 SYHSEKLALAFGLM----YCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMR 707
Query: 575 FHHFKDRICSCNDYW 589
FHHF++ CSC D+W
Sbjct: 708 FHHFRNGSCSCMDFW 722
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 202/440 (45%), Gaps = 66/440 (15%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGY---LDDARHLFDEMPKRNVVSW 76
+ KQ +Q+H I N + +F + LI+ ++ G LD +R LF ++ N+ W
Sbjct: 21 SFKQGLQIHAQTIVNGLH--HQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMW 78
Query: 77 TALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYLH----GKLVHALAL 130
+I GY++ N E L+ S++ PN F+ +L SC L G VH+ +
Sbjct: 79 NTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHII 138
Query: 131 KFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
K ++ ++V NALI++YS + A +F+ R+++S+N+MI
Sbjct: 139 KHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKG------------ 186
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK----- 244
+A++ E AL LF ++Q G+ PD TF + C+ L +H+ + K
Sbjct: 187 -YAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSI 245
Query: 245 -----------------------------YGFEDDTVIANALIHAYARCGSISLSKQVFD 275
G ++++ YARCG I++++++F+
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
M D++SW +++ Y+ GQ EAL+LF M ++PD T V++LSAC+ G
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDL 365
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME-PDSVIWSVLLGS 391
G +++H +EN A ++D+ + G I A ++ R + +++ ++
Sbjct: 366 GKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAG 425
Query: 392 CRKHGETRLAELAATKLKQL 411
+HG L E A T ++L
Sbjct: 426 LAQHG---LGETAITVFREL 442
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 27/358 (7%)
Query: 101 QYFFPNEFSLASVLISC-DYLHGKLVHALALKFSLDAHVYVANALINMYS----KSCADE 155
++ N SL +L SC + G +HA + L ++ + LI+ +S K D
Sbjct: 4 RFLLENPSSLC-LLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDH 62
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP- 214
+ +F ++ N+ WN+MI + ++ N EA+ L+ + +G+AP
Sbjct: 63 SRLLFSQIDCPNLFMWNTMIRGY-------------SRSDNPREAIVLYMSMIAKGIAPP 109
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ TF +L +CA L + VHS I K+GFE D + NALIH Y+ G+++L++ +F
Sbjct: 110 NNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLF 169
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D+ DLVS+N+++K YA Q + AL LF M + PD TFV+L S CS
Sbjct: 170 DESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPN 229
Query: 332 EGNKVFHSMLEN-HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G ++ + +N + + + +VD+ + G I AE++ M + WS ++
Sbjct: 230 VGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVC 289
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
+ GE +A + D + + M + Y +G ++A + KEM+ ++
Sbjct: 290 GYARCGEINVAR---KLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIK 344
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/594 (36%), Positives = 339/594 (57%), Gaps = 29/594 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + AC +++ + ++ + D+FV ++N+YAK G +D+A +
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGD--DVFVGAAVLNLYAKCGKMDEAMRV 162
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLI-SCDYL-HG 122
FD+M +R++V WT +I+G AQ+G A E ++ + + + + LI +C L H
Sbjct: 163 FDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHS 222
Query: 123 KL---VHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF 178
K+ +H ++ + V V +L++MY+K+ E A VF M ++NVISW+++I+ F
Sbjct: 223 KMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGF 282
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A++L M Q G PD + VL AC+ + + +V
Sbjct: 283 AQNGFAGNALQLVVDM-------------QSFGYKPDSVSLVSVLLACSQVGFLKLGKSV 329
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H I + D V + A+I Y++CGS+S ++ VFD++++ D +SWN+I+ +Y +HG
Sbjct: 330 HGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSG 388
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL LF M NV+PD ATF SLLSA SH+GLV++G F M+ + + P HYAC
Sbjct: 389 EEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYAC 448
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDLL R GR+ EA++LI M EP IW LL C HG+ + E+AA K+ +L P D
Sbjct: 449 MVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDD 508
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +SN + + +++ +RK MK + ++K PG S +E+ ++H F K H Q
Sbjct: 509 PGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQY 568
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
E I + L +L ++K MGYVP+T LH++EEE KE L +HSE+LA+ F ++N G R
Sbjct: 569 EEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTR 628
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I KN+R+C DCH K S ++ +EIVVRD RFHHFKD +CSC DYW
Sbjct: 629 ----LLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 197/406 (48%), Gaps = 40/406 (9%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPN 106
LI YA+ G+++ AR +FD+ P+ V +W A+I Y++ G E L+ + + P+
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 107 EFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVF 160
+ VL +C D G+ A+ V+V A++N+Y+K C DEA +VF
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAK-CGKMDEAMRVF 163
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+ M R+++ W +MI A+ EA+ ++RQ+ ++ + D
Sbjct: 164 DKMGRRDLVCWTTMITG-------------LAQNGQAREAVDIYRQMHKKRVEGDGVVML 210
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+++AC L + ++H + + D ++ +L+ YA+ G + L+ VF +M Y
Sbjct: 211 GLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYK 270
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+++SW++++ +A +G A ALQL +M +PDS + VS+L ACS G ++ G V
Sbjct: 271 NVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSV- 329
Query: 338 HSMLENHGVVPQLDHYAC-----MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
HG + + H+ C ++D+ + G + A + ++ DS+ W+ ++ S
Sbjct: 330 ------HGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFR-DSISWNAIIASY 382
Query: 393 RKH--GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
H GE L+ + ++P D F + + + SG K R
Sbjct: 383 GIHGSGEEALSLFLQMRETNVKP-DHATFASLLSAFSHSGLVEKGR 427
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 19/276 (6%)
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+HAL + + H LI Y++ + A +VF+ V +WN+MI A+
Sbjct: 26 IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAY----- 80
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
++ +F EAL L+ ++ EG+ PD T+++VLKAC + R
Sbjct: 81 -SRRGAMF-------EALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAV 132
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
G+ DD + A+++ YA+CG + + +VFDKM DLV W +++ A +GQA+EA+
Sbjct: 133 DQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVD 192
Query: 304 LFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
++ M+ V+ D + L+ AC+ G + G + H + ++ + +VD+
Sbjct: 193 IYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSI-HGYMIRKDIIMDVIVQTSLVDMY 251
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ G + A + R M + + + WS L+ ++G
Sbjct: 252 AKNGHLELASCVFRRM-LYKNVISWSALISGFAQNG 286
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 320/559 (57%), Gaps = 29/559 (5%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVL 114
G L AR +F+++P + ++I GY + + +LQ P+ F+ S+
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 115 ISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWN 172
SC L GK +H + K + Y+ N L+NMYS C A KVF+ M ++V+SW
Sbjct: 86 KSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWA 145
Query: 173 SMIAAFRACKLEAQAIELFAKMK-------------------NEEEALFLFRQLQREGMA 213
+MI A+ L +AI+LF +M+ + EEAL LF ++Q G+
Sbjct: 146 TMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVK 205
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D T + +L AC L +H I K E D + AL+ YA+CGSI + +V
Sbjct: 206 GDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRV 265
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLV 330
F +M D+++W +++ A+ GQ +AL+LF M V+PD+ TFV +L+ACSHAGLV
Sbjct: 266 FQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLV 325
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG F+SM +G+ P ++HY CMVD+LGR GRI EAE LI+ MPM PD + LL
Sbjct: 326 NEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLS 385
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR HG +AE AA +L +L+P + +V +SNIY ++ A+ +R+ M ++K
Sbjct: 386 ACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKP 445
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IE+ VHEF G HPQ I++ L++++ +LK GYVP+ S L D++E+ K
Sbjct: 446 PGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEK 505
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E +L HSEKLA+ F +++ + IR++KN+R+C DCH+ MK S++ +EI+VR
Sbjct: 506 ENELSLHSEKLAIAFGLLST----TPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVR 561
Query: 571 DSNRFHHFKDRICSCNDYW 589
D NRFHHF CSC D+W
Sbjct: 562 DRNRFHHFTKGSCSCRDFW 580
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 154/365 (42%), Gaps = 93/365 (25%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +LF +C G + + QLH H F + D ++ N L+NMY+ G L AR +FD
Sbjct: 81 FPSLFKSC---GVLCEGKQLHCHSTKLGFAS---DAYIQNTLMNMYSNCGCLVSARKVFD 134
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--------------------------- 99
+M ++VVSW +I YAQ E +LF +
Sbjct: 135 KMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALS 194
Query: 100 ------LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYS 149
L ++ ++AS+LI+C +L GK +H K ++ V + AL++MY+
Sbjct: 195 LFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYA 254
Query: 150 KSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
K + E A +VF+ M ++V++W ++I C +A+ELF +M+ E
Sbjct: 255 KCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE---------- 304
Query: 209 REGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+ PD TF VL AC AGLV E A +S+ KYG + ++ R G
Sbjct: 305 ---VKPDAITFVGVLAACSHAGLVNEGIAY-FNSMPNKYGIQPSIEHYGCMVDMLGRAGR 360
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS- 325
I+ EA L NM + PD V LLSAC
Sbjct: 361 IA-------------------------------EAEDLIQNMPMAPDYFVLVGLLSACRI 389
Query: 326 HAGLV 330
H LV
Sbjct: 390 HGNLV 394
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/580 (36%), Positives = 325/580 (56%), Gaps = 32/580 (5%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A +L E + +++ N L Y K G L AR LFDEMP+RNV +W A
Sbjct: 90 GDLTAARELFERIPR------RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNA 143
Query: 79 LISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFS 133
+++G G EE F + + P+EF L SV C D + G+ VHA ++
Sbjct: 144 MVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG 203
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
LD + V ++L +MY + C E V + +++S N++IA
Sbjct: 204 LDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGR-------------T 250
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ + E AL F ++ G+A D TF + +C+ L +H + K G +
Sbjct: 251 QNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 310
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ L+H Y+RCG + S++VF D ++++ AY HG ++A++LF M
Sbjct: 311 VMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGG 370
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+P TF++LL ACSH+GL +EG F M + +G+ P + HY C+VDLLGR G + EA
Sbjct: 371 AEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEA 430
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
E LI MP+ PD VIW LL +C+ +AE A ++ +L+P DS +V +SNI S
Sbjct: 431 EALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATS 490
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
+ +RK M+ + VRK PG+SW+E++ +H+F +G + HP+++ I + LEE++ ++
Sbjct: 491 RRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKI 550
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRIC 549
+ GY P+ S+ LHD+E+E KE L HHSEKLA+ FA ++ E IR+MKN+R+C
Sbjct: 551 RQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLS----LPEGVPIRVMKNLRVC 606
Query: 550 VDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +KL S + G+EIVVRD +RFHHFKD CSC DYW
Sbjct: 607 DDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +HA A + AN L+ Y+ A ++FE + RNV+SWN + +
Sbjct: 61 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120
Query: 182 KLEAQAIELFAKMKN------------------EEEALFLFRQLQREGMAPDWCTFSIVL 223
A +LF +M +EE+L F ++REGM PD V
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
+ CAGL VH+ + + G + D + ++L H Y RCG + + V + +V
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
S N+I+ +G ++ AL+ F M V D TFVS +S+CS + +G ++ H
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI-HGQ 299
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ GV + C+V + R G + ++E++
Sbjct: 300 VMKAGVDKVVPVMTCLVHMYSRCGCLGDSERV 331
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 25/322 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++F CA ++ Q+H +++ + + +D+ V + L +MY + G L + + +
Sbjct: 177 GSVFRCCAGLRDVVTGRQVHAYVVRSGLD--RDMCVGSSLAHMYMRCGCLQEGEAVLRML 234
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISCDYL----HGK 123
P ++VS +I+G Q+G++E FC + + + S + SC L G+
Sbjct: 235 PSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQ 294
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H +K +D V V L++MYS+ C ++ +VF + ++MI+A+
Sbjct: 295 QIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHG 354
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+AIELF +M N G P TF +L AC+ + L+
Sbjct: 355 HGQKAIELFKQMMN-------------GGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 401
Query: 243 AK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKE 300
K YG + ++ R G + ++ + M D V W ++L A
Sbjct: 402 TKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDM 461
Query: 301 ALQLFSN-MNVQP-DSATFVSL 320
A ++ + + P DSA++V L
Sbjct: 462 AERIAKRVIELDPHDSASYVLL 483
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS + +AC L R +H+ A G D AN L+ AYA G ++ ++++F+++
Sbjct: 47 FSHLFRACRAL---RPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+++SWN + Y +G A +LF M + + AT+ ++++ ++ G +E F
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMP-ERNVATWNAMVAGLTNLGFDEESLGFFL 162
Query: 339 SM 340
M
Sbjct: 163 DM 164
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/558 (39%), Positives = 328/558 (58%), Gaps = 30/558 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ LI YA GY+ A+ +FDE+P ++VVSW ALISGYA+ GN +E LF +
Sbjct: 167 RDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEM 226
Query: 100 LQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
++ P+E ++ +VL +C G+ VH+ +++ + NALI++Y K C +
Sbjct: 227 MKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIK-CGE 285
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +FE + +++VISWN++I + M +EAL LF+++ R G
Sbjct: 286 VETASGLFEGLSYKDVISWNTLIGGY-------------THMNLYKEALLLFQEMLRSGE 332
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLS 270
+P+ T +L ACA L +H I K G + + + +LI YA+CG I +
Sbjct: 333 SPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAA 392
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+QVFD M L SWN+++ +A+HG+A A +FS M ++PD TFV LLSACSH+
Sbjct: 393 QQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHS 452
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G++ G +F SM E++ + P+L+HY CM+DLLG G EAE++I M M+PD VIW
Sbjct: 453 GMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCS 512
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +C+ HG L E A L ++EP +S +V +SNIY +G +N+ R + +
Sbjct: 513 LLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGM 572
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS L ++EE
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 632
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S + +EI
Sbjct: 633 EWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLISKIYKREI 688
Query: 568 VVRDSNRFHHFKDRICSC 585
+ RD RFHHF D +CSC
Sbjct: 689 IARDRTRFHHFXDGVCSC 706
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 195/419 (46%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +FD + + N++ W + G+A + L+ C + PN ++ +
Sbjct: 50 FDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFL 109
Query: 114 LISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNV 168
L +C + G+ +H LK D +YV +LI MY K+ ++A KVF+ R+V
Sbjct: 110 LKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDV 169
Query: 169 ISWNSMIAAFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQRE 210
+S+ ++I + + A ++F A+ N +EAL LF+++ +
Sbjct: 170 VSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKT 229
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T VL ACA + VHS I +GF + I NALI Y +CG + +
Sbjct: 230 NVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F+ ++Y D++SWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 290 SGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHL 349
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ GV ++D+ + G I A+++ M + W
Sbjct: 350 GAIDIG-RWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSW 407
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG A +++++ +EP D + FV + + SG + R I + M
Sbjct: 408 NAMIFGFAMHGRANPAFDIFSRMRKDGIEP-DDITFVGLLSACSHSGMLDLGRHIFRSM 465
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 150/319 (47%), Gaps = 54/319 (16%)
Query: 112 SVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKS----CADEAWKVFENMEFR 166
S+L +C L +++HA +K L Y + LI S A VF++++
Sbjct: 7 SLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEP 66
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
N++ WN+M FR L + + AL+L+ + G+ P+ TF +LKAC
Sbjct: 67 NLLIWNTM---FRGHALSSDPVS----------ALYLYVCMISLGLVPNSYTFPFLLKAC 113
Query: 227 AGLVTERHASAVH----------------SLIAKY----GFED-----------DTVIAN 255
A R +H SLIA Y ED D V
Sbjct: 114 AKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYT 173
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI YA G I ++++FD++ D+VSWN+++ YA G KEAL+LF M NV+P
Sbjct: 174 ALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKP 233
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D +T V++LSAC+ + ++ G +V HS +++HG L ++DL + G + A L
Sbjct: 234 DESTMVTVLSACAQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGL 292
Query: 373 IREMPMEPDSVIWSVLLGS 391
+ + D + W+ L+G
Sbjct: 293 FEGLSYK-DVISWNTLIGG 310
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G I +H ++ + LI+MYAK G ++ A+ +FD M
Sbjct: 341 SILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSML 400
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
R++ SW A+I G+A HG A F +F + + P++ + +L +C +
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSH 451
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/556 (38%), Positives = 336/556 (60%), Gaps = 27/556 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY- 102
V LI++Y+K G ++ AR LFD M K ++V++ ALISGY+ +G LF L+
Sbjct: 249 VLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLG 308
Query: 103 FFPNEFSLASVL-ISCDYLHGKL---VHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
+PN +L +++ + + H L +H LK A+ V+ A+ ++ + + + A
Sbjct: 309 LWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESAR 368
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K F+ M + + SWN+MI+ + A+ E A+ LF Q+ + + P+
Sbjct: 369 KAFDTMPEKTMESWNAMISGY-------------AQNGLTEMAVALFEQMVKLNVRPNPI 415
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T S L ACA L +H +I + E + + ALI YA+CGSIS ++++F+ M
Sbjct: 416 TISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTM 475
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
++VSWN+++ Y LHGQ EAL+L+ +M ++ P SATF+S+L ACSH GLV+EG
Sbjct: 476 DNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGW 535
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP-DSVIWSVLLGSCR 393
KVF SM +++ + P ++H CMVDLLGR G++ EA +LI E P +W LLG+C
Sbjct: 536 KVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACM 595
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H ++ LA+LA+ KL +L+P +S +V +SN++ +++A ++R+E K ++ K PG
Sbjct: 596 VHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGY 655
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
+ IEI N+ H F +G + HPQ EAI+ LE+L ++ GY PET AL+D+EEE KE
Sbjct: 656 TLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHM 715
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
+ HSEKLA+ F +++ + IRI+KN+R+C+DCHN K S + + IVVRD++
Sbjct: 716 VKVHSEKLAIAFGLLST----EPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDAS 771
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF+D +CSC DYW
Sbjct: 772 RFHHFRDGVCSCGDYW 787
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 174/366 (47%), Gaps = 27/366 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV + L +Y +D AR +FD +P + V W L++G + E R+ C
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCD-- 205
Query: 101 QYFFPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD-- 154
P+ +LASVL + D G+ VH+ A K L H +V LI++YSK C D
Sbjct: 206 GSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSK-CGDVE 264
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A +F+ ME +++++N++I+ + + ++ LF +L G+ P
Sbjct: 265 SARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFT-------------ELMTLGLWP 311
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T ++ + + A +H + K GF ++ ++ A+ + R + +++ F
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M + SWN+++ YA +G + A+ LF M NV+P+ T S LSAC+ G +
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G K H ++ + P + ++D+ + G I EA ++ M + + V W+ ++
Sbjct: 432 LG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAG 489
Query: 392 CRKHGE 397
HG+
Sbjct: 490 YGLHGQ 495
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 28/271 (10%)
Query: 138 VYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
+VA+AL +Y S D A KVF+ + + + WN+++A ++A+E FA+M
Sbjct: 149 TFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSG----SEAVESFARMVC 204
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
+ + PD T + VL A A + VHS K G + +
Sbjct: 205 DGS------------VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPD 313
LI Y++CG + ++ +FD M DLV++N+++ Y+++G ++ LF+ + + P+
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312
Query: 314 SATFVSLL---SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
S+T V+L+ S H L Q H + G + L R+ + A
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQ----CLHGFVLKSGFTANSPVSTAITTLHCRLNDMESAR 368
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
K MP E W+ ++ ++G T +A
Sbjct: 369 KAFDTMP-EKTMESWNAMISGYAQNGLTEMA 398
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G + LH +I EP +++V LI+MYAK G + +AR +F+ M
Sbjct: 418 SSTLSACAQLGALSLGKWLHR-IITEEDLEP-NVYVMTALIDMYAKCGSISEARRIFNTM 475
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHGKLVHA 127
+NVVSW A+I+GY HG E +L+ +L + P + SVL +C HG LV
Sbjct: 476 DNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACS--HGGLV-- 531
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
+E WKVF +M I+ C
Sbjct: 532 --------------------------EEGWKVFRSMTDDYAIN-----PGIEHCTC---M 557
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
++L + +EA L + + + P + +L AC
Sbjct: 558 VDLLGRAGQLKEAFELISEFPKSAVGPG--VWGALLGAC 594
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 342/618 (55%), Gaps = 55/618 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + ACA ++ QLH +I + P D +V + LI +YAK G +A+ +
Sbjct: 260 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQ--IDPYVASALIELYAKCGSFKEAKRV 317
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-----QYFFPNEFSLASVLISC-- 117
F+ + RN VSWT LI G Q+ ECF L + ++F+LA+++ C
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQY----ECFSKSVELFNQMRAELMAIDQFALATLISGCFN 373
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
D G+ +H+L LK + + V+N+LI++Y+K C D A VF +M R+++SW S
Sbjct: 374 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAK-CGDLQNAEFVFSSMSERDIVSWTS 432
Query: 174 MIAAFRACKLEAQAIELFAKMKN------------------EEEALFLFR-QLQREGMAP 214
MI A+ +A E F M EE+ L ++ L ++ + P
Sbjct: 433 MITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 492
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
DW T+ + + CA + + + K G + +ANA I Y++CG IS ++++F
Sbjct: 493 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 552
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D + D+VSWN+++ Y+ HG K+A + F +M +PD ++V++LS CSH+GLVQ
Sbjct: 553 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 612
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F M HG+ P L+H++CMVDLLGR G + EA+ LI +MPM+P + +W LL +
Sbjct: 613 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ HG LAELAA + +L+ DS ++ ++ IY +G + + +RK M+ ++K P
Sbjct: 673 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 732
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+E+EN+VH F + HPQ AI K++EL+ ++ +GYV E +
Sbjct: 733 GYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR---------TESPRS 783
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E HHSEKLA+ F IM+ + I IMKN+RIC DCH +KL S + +E V+RD
Sbjct: 784 E--IHHSEKLAVAFGIMSLPAWMP----IHIMKNLRICGDCHTVIKLISSVTDREFVIRD 837
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHFK CSC DYW
Sbjct: 838 GVRFHHFKSGSCSCGDYW 855
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 193/442 (43%), Gaps = 84/442 (19%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL HA G + A +L I EP ++ N ++N YAK G L DA LFD MP
Sbjct: 60 TLLHAYLSCGALSDARRLLRADIK----EP-NVITHNIMMNGYAKQGSLSDAEELFDRMP 114
Query: 70 KRNVVSWTALISGYAQH-GNAEECFRLFC-----SLLQYFFPNEF--------SLASVLI 115
+R+V SW L+S ++ G+ C L C LL F+ +F +L + +
Sbjct: 115 RRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFV 174
Query: 116 SCDYLH--GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWN 172
C Y+ +L + ++ N+++ Y+K D A + FE+M R+V+SWN
Sbjct: 175 RCGYVDFASRLFSQIE-----RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 229
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
MIAA ++ EAL L ++ R+G+ D T++ L ACA L +
Sbjct: 230 MMIAAL-------------SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL 276
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+H+ + + + D +A+ALI YA+CGS +K+VF+ + + VSW ++
Sbjct: 277 GWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGS 336
Query: 293 ALHGQAKEALQLFSNMNVQ---PDSATFVSLLSAC------------------------- 324
+ ++++LF+ M + D +L+S C
Sbjct: 337 LQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAI 396
Query: 325 ----------SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
+ G +Q VF SM E V + M+ ++G I++A +
Sbjct: 397 VVSNSLISLYAKCGDLQNAEFVFSSMSERDIV-----SWTSMITAYSQIGNIIKAREFFD 451
Query: 375 EMPMEPDSVIWSVLLGSCRKHG 396
M +++ W+ +LG+ +HG
Sbjct: 452 GMATR-NAITWNAMLGAYIQHG 472
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 107/299 (35%), Gaps = 91/299 (30%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC------------------ 264
L++C A A+H + G + N L+HAY C
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 265 --------------GSISLSKQVFDKMTYHDLVSWNSILK-------------AYALHGQ 297
GS+S ++++FD+M D+ SWN+++ A
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 298 AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF-----------HSMLENHGV 346
A + L LF + D +L+ G V +++F +SML +
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 206
Query: 347 VPQLDH---------------YACMVDLLGRVGRILEAEKLIREM---PMEPDSVIWSVL 388
+ +DH + M+ L + GR+ EA L+ EM + DS ++
Sbjct: 207 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 266
Query: 389 LGSCRKHGETRLAELAATK---------LKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
L +C RL L K L Q++P + +++ Y GSF +A+ +
Sbjct: 267 LTAC-----ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL---YAKCGSFKEAKRV 317
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 320/564 (56%), Gaps = 31/564 (5%)
Query: 53 AKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLA 111
+K G L+ A +FD++P + + + GY + A C ++ +L + PN+F+
Sbjct: 65 SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYP 124
Query: 112 SVLISC--DYL--HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFR 166
++ +C DY GK +HA LKF A + N LI+MY ++A +VF+NM R
Sbjct: 125 PLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR 184
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQ 208
+V+SW S+I + +A E+F M EA LF +++
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
E + D + +L AC GL +H I K G E D+ +A +I Y +CG +
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACS 325
+ +VF+++ + SWN ++ A+HG+ + A++LF M V PD TFV++LSAC+
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H+GLV+EG F M E G+ P ++H+ CMVDLLGR G + EA KLI EMP+ PD+ +
Sbjct: 365 HSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL 424
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
L+G+CR HG T L E K+ +LEP +S +V ++N+Y +G + +RK M
Sbjct: 425 GALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDR 484
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K PG S IE E+ V EF +GG+ HPQ + I+ KL+E++ ++ +GYVP+T LHDI
Sbjct: 485 GVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDI 544
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+EE KE LY+HSEKLA+ F ++ + +RI KN+RIC DCH KL S + +
Sbjct: 545 DEEEKENPLYYHSEKLAIAFGLLKT----KPGETLRISKNLRICRDCHQASKLISKVYDR 600
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI++RD NRFHHF+ CSC DYW
Sbjct: 601 EIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 202/469 (43%), Gaps = 113/469 (24%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
Y L AC + I++ Q+H H++ F D F N+LI+MY F L+ AR +FD
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFG---ADGFSLNNLIHMYVNFQSLEQARRVFD 179
Query: 67 EMPKRNVVSWTALISGYAQHGNAE-------------------------------ECFRL 95
MP+R+VVSWT+LI+GY+Q G + E F L
Sbjct: 180 NMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFAL 239
Query: 96 FCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK 150
F + L+ ++F AS+L +C L GK +H K ++ +A +I+MY K
Sbjct: 240 FDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCK 299
Query: 151 -SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C ++A +VF + + + SWN MI A E A+ LF++++R
Sbjct: 300 CGCLEKASEVFNELPQKGISSWNCMIGG-------------LAMHGKGEAAIELFKEMER 346
Query: 210 EGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
E +APD TF VL ACA GLV E K+ F+ T + +
Sbjct: 347 EMVAPDGITFVNVLSACAHSGLVEE----------GKHYFQYMTEVL-----------GL 385
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHA 327
+ F M DL+ +L +EA +L + M V PD+ +L+ AC
Sbjct: 386 KPGMEHFGCMV--DLLGRAGLL---------EEARKLINEMPVNPDAGVLGALVGACRIH 434
Query: 328 GLVQEGNKVFHSMLE----NHGVVPQLDHYACMVDLLGRVGRILEAEKL--------IRE 375
G + G ++ ++E N G Y + +L GR + K+ +++
Sbjct: 435 GNTELGEQIGKKVIELEPHNSG------RYVLLANLYASAGRWEDVAKVRKLMNDRGVKK 488
Query: 376 MP----MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
P +E +S + + G R H + + E+ A + LE S+G+V
Sbjct: 489 APGFSMIESESGVDEFIAGG-RAHPQAK--EIYAKLDEILETIRSIGYV 534
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 239 HSLIAKYGFEDDTVIANALIH--AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
HS I + G D +I A ++ G ++ + +VFDK+ + D +N+I + Y
Sbjct: 40 HSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQ 99
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
A+ + ++S M +V P+ T+ L+ AC ++EG ++ H+ + G
Sbjct: 100 LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQI-HAHVLKFGFGADGFSL 158
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++ + + +A ++ MP + D V W+ L+
Sbjct: 159 NNLIHMYVNFQSLEQARRVFDNMP-QRDVVSWTSLI 193
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/634 (36%), Positives = 343/634 (54%), Gaps = 72/634 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA + Q+H I + D+FV N +++MYAK G +++A +F M
Sbjct: 370 ILPACASLAASLRGRQVHGFSIRS--GLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKF 427
Query: 71 RNVVSWTALISGYAQHGNAEECFRLF----------------------------CSLLQY 102
++VVSW A+++GY+Q G E LF C L
Sbjct: 428 KDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDV 487
Query: 103 FF--------PNEFSLASVLISC----DYLHGKLVHALALKFSLD--------AHVYVAN 142
F PN +L S+L +C LHGK H A+KF L+ + V N
Sbjct: 488 FRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVIN 547
Query: 143 ALINMYSKSCADE-AWKVFENM--EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
LI+MY+K + E A K+F+++ + R+V++W MI + A++LF+ M ++
Sbjct: 548 GLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDK 607
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALI 258
++ P+ T S L ACA L R VH+ + + + + +AN LI
Sbjct: 608 SI-----------KPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLI 656
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSA 315
Y++ G + ++ VFD M + VSW S++ Y +HG+ ++AL++F M + PD
Sbjct: 657 DMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGI 716
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF+ +L ACSH+G+V G F+ M ++ GV P +HYACMVDL GR GR+ EA KLI E
Sbjct: 717 TFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINE 776
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MPMEP V+W LL +CR H L E AA +L +LE G+ + +SNIY + +
Sbjct: 777 MPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDV 836
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
IR MK + ++K PG SWI+ V F G + HPQ + I++ L +LI ++K +GYV
Sbjct: 837 ARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYV 896
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNF 555
P+TS ALHD+++E K + L+ HSEKLAL + I+ R+ IRI KN+RIC DCH+
Sbjct: 897 PQTSFALHDVDDEEKGDLLFEHSEKLALAYGILT----LHPRAPIRITKNLRICGDCHSA 952
Query: 556 MKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ S ++ EI++RDS+RFHHFK+ CSC YW
Sbjct: 953 ITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 201/406 (49%), Gaps = 52/406 (12%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV---VSWTALISGYAQHGNAEECFRLFC 97
++FV N +++MY K G L A ++FD++ R + VSW +++S Y +A LF
Sbjct: 293 NVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFH 352
Query: 98 SLLQYFF--PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS 151
+ P+ SL ++L +C L G+ VH +++ L V+V NA+++MY+K
Sbjct: 353 KMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAK- 411
Query: 152 CA--DEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEE---------- 198
C +EA KVF+ M+F++V+SWN+M+ + +A +LE A+ LF +M E
Sbjct: 412 CGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLE-HALSLFERMTEENIELDVVTWTA 470
Query: 199 ------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
EAL +FRQ+ G P+ T +L AC + H H K+
Sbjct: 471 VITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFI 530
Query: 247 FE--------DDTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYALHG 296
DD + N LI YA+C S +++++FD ++ D+V+W ++ YA HG
Sbjct: 531 LNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHG 590
Query: 297 QAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
A ALQLFS M +++P+ T L AC+ ++ G +V +L N L
Sbjct: 591 DANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLF 650
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
C++D+ + G + A+ + MP + ++V W+ L+ HG
Sbjct: 651 VANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMHGR 695
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 171/411 (41%), Gaps = 69/411 (16%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKR--NVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
+ +LI Y A L + +P +V W LI G+ + F L+ +
Sbjct: 193 LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKS 252
Query: 102 Y-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DE 155
+ P+ ++ V +C G +HA + ++V+V NA+++MY K A
Sbjct: 253 LGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRH 312
Query: 156 AWKVFENMEFRNV---ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +F+++ R + +SWNS+++A+ A+ LF KM R M
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTT------------RHLM 360
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+PD + +L ACA L VH + G DD + NA++ YA+CG + + +
Sbjct: 361 SPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANK 420
Query: 273 VFDKMTYHDLVSWN-----------------------------------SILKAYALHGQ 297
VF +M + D+VSWN +++ YA GQ
Sbjct: 421 VFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQ 480
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV----FHSMLENHGVVPQL 350
EAL +F M +P+ T VSLLSAC G + G + +L G P
Sbjct: 481 GCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGA 540
Query: 351 DHYAC---MVDLLGRVGRILEAEKLIREM-PMEPDSVIWSVLLGSCRKHGE 397
D ++D+ + A K+ + P + D V W+V++G +HG+
Sbjct: 541 DDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGD 591
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/586 (37%), Positives = 327/586 (55%), Gaps = 46/586 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ G I ++H LFV N L++MY K G+L +AR + DE
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATK--VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE 200
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
M +R+VVSW +L+ GYAQ+ ++ + C ++ SV IS H
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEV-CREME----------SVKIS---------HD 240
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
SL V MY K +F M ++++SWN MI + + +A
Sbjct: 241 AGTMASLLPAVSNTTTENVMYVKD-------MFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+EL+++M + +G PD + + VL AC +H I +
Sbjct: 294 VELYSRM-------------EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL 340
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ ++ NALI YA+CG + ++ VF+ M D+VSW +++ AY G+ +A+ LFS
Sbjct: 341 IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 400
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
+ + PDS FV+ L+ACSHAGL++EG F M +++ + P+L+H ACMVDLLGR G
Sbjct: 401 LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
++ EA + I++M MEP+ +W LLG+CR H +T + LAA KL QL P S +V +SN
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
IY +G + + IR MK ++K PG S +E+ +H F G + HPQ + I+++L+
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE-RSVIRIM 543
L+ ++K +GYVP++ ALHD+EEE KE L HSEKLA+VFA+MN + + IRI
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+RIC DCH KL S + +EI++RD+NRFH F+ +CSC DYW
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 152/354 (42%), Gaps = 47/354 (13%)
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A KVF+ + RNVI N MI ++ + +++F M + PD
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN-------------VRPD 139
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
TF VLKAC+ T +H K G + N L+ Y +CG +S ++ V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+M+ D+VSWNS++ YA + + +AL++ M + D+ T SLL A S+ E
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTE 257
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP---MEPDSVIWSVLL 389
M G L + M+ + + +EA +L M EPD+V + +L
Sbjct: 258 NVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 390 GSCRKHGETRLAELAA-----TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
+C G+T L + K+L P + L + ++Y G KAR + + MK
Sbjct: 317 PAC---GDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
V +SW + + + G R A+F KL++ G VP++
Sbjct: 373 RDV-----VSWTAM---ISAYGFSG-RGCDAVALFSKLQD-------SGLVPDS 410
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F++ K+ + +L K+ +E +FL Q+ PD R
Sbjct: 19 FQSRKVSSSLPKLELDQKSPQETVFLLGQVL--DTYPDI----------------RTLRT 60
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VHS I ++ + L+ AYA ++ +++VFD++ +++ N ++++Y +G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
E +++F M NV+PD TF +L ACS +G + G K+ H G+ L
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI-HGSATKVGLSSTLFVGN 179
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+V + G+ G + EA ++ EM D V W+ L+
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLV 213
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 342/618 (55%), Gaps = 55/618 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ Y + ACA ++ QLH +I + P D +V + LI +YAK G +A+ +
Sbjct: 270 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQ--IDPYVASALIELYAKCGSFKEAKRV 327
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-----QYFFPNEFSLASVLISC-- 117
F+ + RN VSWT LI G Q+ ECF L + ++F+LA+++ C
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQY----ECFSKSVELFNQMRAELMAIDQFALATLISGCFN 383
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
D G+ +H+L LK + + V+N+LI++Y+K C D A VF +M R+++SW S
Sbjct: 384 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAK-CGDLQNAEFVFSSMSERDIVSWTS 442
Query: 174 MIAAFRACKLEAQAIELFAKMKN------------------EEEALFLFR-QLQREGMAP 214
MI A+ +A E F M EE+ L ++ L ++ + P
Sbjct: 443 MITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 502
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
DW T+ + + CA + + + K G + +ANA I Y++CG IS ++++F
Sbjct: 503 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 562
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D + D+VSWN+++ Y+ HG K+A + F +M +PD ++V++LS CSH+GLVQ
Sbjct: 563 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F M HG+ P L+H++CMVDLLGR G + EA+ LI +MPM+P + +W LL +
Sbjct: 623 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ HG LAELAA + +L+ DS ++ ++ IY +G + + +RK M+ ++K P
Sbjct: 683 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 742
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+E+EN+VH F + HPQ AI K++EL+ ++ +GYV E +
Sbjct: 743 GYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR---------TESPRS 793
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E HHSEKLA+ F IM+ + I IMKN+RIC DCH +KL S + +E V+RD
Sbjct: 794 E--IHHSEKLAVAFGIMSLPAWMP----IHIMKNLRICGDCHTVIKLISSVTDREFVIRD 847
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHFK CSC DYW
Sbjct: 848 GVRFHHFKSGSCSCGDYW 865
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 191/450 (42%), Gaps = 74/450 (16%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL HA G + A +L I EP ++ N ++N YAK G L DA LFD MP
Sbjct: 44 TLLHAYLSCGALSDARRLLRADIK----EP-NVITHNIMMNGYAKQGSLSDAEELFDRMP 98
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYLHGKLVH- 126
+R+V SW L+SGY Q + F S+ + PN F+ V+ SC L + +
Sbjct: 99 RRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAP 158
Query: 127 ---ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
L KF V AL++M+ + D A ++F +E + NSM+A +
Sbjct: 159 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 218
Query: 183 LEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLK 224
AIE F M + EAL L ++ R+G+ D T++ L
Sbjct: 219 GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLT 278
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA L + +H+ + + + D +A+ALI YA+CGS +K+VF+ + + VS
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSAC----------------- 324
W ++ + ++++LF+ M + D +L+S C
Sbjct: 339 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398
Query: 325 ------------------SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ G +Q VF SM E V + M+ ++G I
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIV-----SWTSMITAYSQIGNI 453
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++A + M +++ W+ +LG+ +HG
Sbjct: 454 IKAREFFDGMATR-NAITWNAMLGAYIQHG 482
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD-KMTYHD 281
L++C A A+H + G + N L+HAY CG++S ++++ + +
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
+++ N ++ YA G +A +LF M + D A++ +L+S A +G + F SM
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMP-RRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 342 ENHGVVPQLDHYACMVDLLGRVG 364
+ +P + C++ G +G
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALG 152
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/592 (37%), Positives = 340/592 (57%), Gaps = 35/592 (5%)
Query: 16 ALHGNIKQAMQLHEHMINN--FPNE------PQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A G + Q +H + I PN + + L++MYAK G L AR +FD
Sbjct: 239 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 298
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISC---DYLH- 121
MP RN V+W+ALI G+ + F LF ++L F + S+AS L +C D+L
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 358
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +HAL K + A + N+L++MY+K+ D+A +F+ M ++ +S++++++ +
Sbjct: 359 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY-- 416
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ EEA +F+++Q + PD T ++ AC+ L +H H
Sbjct: 417 -----------VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 465
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ G +T I NALI YA+CG I LS+QVF+ M D+VSWN+++ Y +HG KE
Sbjct: 466 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 525
Query: 301 ALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A LF +N+ PD TF+ LLSACSH+GLV EG FH M +G+ P+++HY CMV
Sbjct: 526 ATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMV 585
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLL R G + EA + I+ MP+ D +W LLG+CR + L + + +++L P +
Sbjct: 586 DLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG 645
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
FV +SNIY +G F++A +R K +K PG SWIEI +H F G + HPQ
Sbjct: 646 NFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPE 705
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+++L+ ++ +K +GY P+TS L D+EEE KE+ L HSEKLA+ + I+ SL ++
Sbjct: 706 IYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGIL---SLSEDK 762
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ + KN+R+C DCH +K S + + I+VRD+NRFHHFK+ CSC D+W
Sbjct: 763 TIF-VTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 201/417 (48%), Gaps = 40/417 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H I+ DLFV+ L++MY K L DA H+F MP R++V+W A+++GYA H
Sbjct: 147 IHRHAIH--AGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 87 GNAEECFRLFCSL---LQYFFPNEFSLASVLI----SCDYLHGKLVHALAL--------- 130
G S+ + PN +L ++L G VHA +
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRN 264
Query: 131 -KFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
K L V + AL++MY+K C A +VF+ M RN ++W+++I F C QA
Sbjct: 265 SKSKLTDGVLLGTALLDMYAK-CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 323
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
LF M + ++P + + L+ACA L R +H+L+AK G
Sbjct: 324 FLLFKAMLAQGLCF----------LSPT--SIASALRACASLDHLRMGEQLHALLAKSGV 371
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D N+L+ YA+ G I + +FD+M D VS+++++ Y +G+A+EA +F
Sbjct: 372 HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 431
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M NV+PD+AT VSL+ ACSH +Q G + H + G+ + ++D+ + G
Sbjct: 432 MQACNVEPDAATMVSLIPACSHLAALQHG-RCSHGSVIIRGLASETSICNALIDMYAKCG 490
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFV 420
RI + ++ MP D V W+ ++ HG + A ++ L P D + F+
Sbjct: 491 RIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 546
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 182/382 (47%), Gaps = 37/382 (9%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGN--AEECFRLFCSLLQY-FFPNEFSLAS 112
G+L A HLFD++P +V ++ LI Y+ A + L+ +L++ PN ++
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 113 VLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRN 167
L +C D+ G+ +H A+ L A ++V+ AL++MY K +C +A +F M R+
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
+++WN+M+A + + A+ A L Q+Q + P+ T +L A
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAV-----------AHLLSMQMQMHRLRPNASTLVALLPLLA 239
Query: 228 GLVTERHASAVHSLI----------AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
++VH+ +K D ++ AL+ YA+CGS+ +++VFD M
Sbjct: 240 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 299
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP----DSATFVSLLSACSHAGLVQEG 333
+ V+W++++ + L + +A LF M Q + S L AC+ ++ G
Sbjct: 300 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 359
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
++ H++L GV L ++ + + G I +A L EM ++ D+V +S L+
Sbjct: 360 EQL-HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYV 417
Query: 394 KHGETRLAELAATKLK--QLEP 413
++G A L K++ +EP
Sbjct: 418 QNGRAEEAFLVFKKMQACNVEP 439
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/584 (39%), Positives = 323/584 (55%), Gaps = 34/584 (5%)
Query: 35 FPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F PQ ++ +N +I + K G + +A LF+EM ++++VSW+ALISGY Q+G EE
Sbjct: 230 FDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEAL 289
Query: 94 RLFCSL-LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMY 148
+F + +E + SVL +C +L GK++H L ++ ++++V + NALI+MY
Sbjct: 290 VMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMY 349
Query: 149 SKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--------- 198
S S +A K+F + ISWNSMI+ C +A LF M ++
Sbjct: 350 SGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVIS 409
Query: 199 ---------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
E L LF ++Q + PD V+ AC L VH+ I K G +
Sbjct: 410 GYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKV 469
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ ++ L+ Y +CG + + +VF+ M + SWN+++ A++G + +L +FS M
Sbjct: 470 NVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMK 529
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
V P+ TF+ +L AC H GLV EG F SM+E HG+ P + HY CMVDLLGR G +
Sbjct: 530 NNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLL 589
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF-VQMSNI 425
EAEKLI MPM PD W LLG+C+KHG+T + E KL +L+P D GF V +SNI
Sbjct: 590 NEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQP-DHDGFHVLLSNI 648
Query: 426 YCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEEL 485
+ G + +R MK V K PG S IE VHEF +G K HP + L E+
Sbjct: 649 FASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEM 708
Query: 486 IGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKN 545
+LK GY P+T+ DI+EE KE L+ HSEKLA+ F ++ + IRIMKN
Sbjct: 709 AKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLT----ISPPTPIRIMKN 764
Query: 546 IRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RIC DCH KL S +EIVVRD +RFH+FK+ CSC DYW
Sbjct: 765 LRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 194/477 (40%), Gaps = 98/477 (20%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMY--AKFGYLDDA 61
+ I T H C N+KQ ++ MI D F + L+ + F LD +
Sbjct: 40 TLSILETHLHNCH---NLKQFNRILSQMI--LTGFISDTFAASRLLKFSTDSPFIGLDYS 94
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY- 119
+FD + N W ++ Y Q +AE+ L+ +++ P+ ++ V+ +C
Sbjct: 95 LQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVR 154
Query: 120 ---LHGKLVHALALKFSLDAHVYVANALINMYS--------------------------- 149
GK +H LK D+ VYV N LINMY+
Sbjct: 155 LLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 214
Query: 150 -----KSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------- 197
K +EA +F+ M RN+++ NSMI +A +LF +M +
Sbjct: 215 AGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSA 274
Query: 198 -----------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
EEAL +F ++ GM D VL ACA L + +H L+ + G
Sbjct: 275 LISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 334
Query: 247 FEDDTVIANALIHAYA-------------------------------RCGSISLSKQVFD 275
E + NALIH Y+ +CGS+ ++ +FD
Sbjct: 335 IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFD 394
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
M D+VSW++++ YA H E L LF M ++PD VS++SAC+H + +
Sbjct: 395 VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQ 454
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
G K H+ + +G+ + ++D+ + G + A ++ M E W+ L+
Sbjct: 455 G-KWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME-EKGVSSWNALI 509
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 55/245 (22%)
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D + ++F+ +E N WN+M+ A+ + + E+AL L++ + + +
Sbjct: 92 DYSLQIFDRIENSNGFMWNTMMRAY-------------IQSNSAEKALLLYKLMVKNNVG 138
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T+ +V++ACA + E +H + K GF+ D + N LI+ YA CG++ ++++
Sbjct: 139 PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKL 198
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEG 333
FD+ D VSWNSIL Y G +EA +F M
Sbjct: 199 FDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQM------------------------- 233
Query: 334 NKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
PQ + A M+ LLG++G+++EA KL EM E D V WS L+
Sbjct: 234 --------------PQRNIVASNSMIVLLGKMGQVMEAWKLFNEMD-EKDMVSWSALISG 278
Query: 392 CRKHG 396
++G
Sbjct: 279 YEQNG 283
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 246 GFEDDTVIANALIHAYARCGSISL--SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
GF DT A+ L+ I L S Q+FD++ + WN++++AY A++AL
Sbjct: 68 GFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALL 127
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
L+ M NV PD+ T+ ++ AC+ L++ G K H + G + ++++
Sbjct: 128 LYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMY 186
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
G + +A KL E P+ DSV W+ +L K G+ A+L ++ Q
Sbjct: 187 AVCGNMRDARKLFDESPV-LDSVSWNSILAGYVKKGDVEEAKLIFDQMPQ 235
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 323/555 (58%), Gaps = 27/555 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QY 102
V+ L++MY+K G + AR +FD M + VVSW ++I GY Q+G+ +F ++ +
Sbjct: 313 VSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQ 372
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
++ L +C D G+ VH L + L + V V N+LI+MYSK D A
Sbjct: 373 VEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAA 432
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
++FEN++ + ++SWN+MI + +AI+ F KM Q + + PD
Sbjct: 433 EIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKM-------------QLQNIKPDSF 479
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T V+ A A L A +H L+ + + + +A AL+ YA+CG++ ++++FD M
Sbjct: 480 TMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMM 539
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
+ +WN+++ Y HG K AL+LF M ++P+ TF+ +LSACSH+GLV+EG
Sbjct: 540 DERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGF 599
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM +++G+ P +DHY MVDLLGR R+ EA I++MP+EP ++ +LG+CR
Sbjct: 600 QYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRI 659
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H L E AA ++ L+P D V ++NIY + ++K +R M+ ++K PG S
Sbjct: 660 HKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWS 719
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
+E++N VH F SG HPQ + I+ LE L ++K GY+P+T+ ++HD+E+ KE+ L
Sbjct: 720 VVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTN-SVHDVEDVVKEQLL 778
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ F+++N + I + KN+R+C DCHN K S + +EI+VRD R
Sbjct: 779 NSHSEKLAIAFSLLNTSP----GTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRR 834
Query: 575 FHHFKDRICSCNDYW 589
FHHFKD CSC DYW
Sbjct: 835 FHHFKDGTCSCGDYW 849
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 157/310 (50%), Gaps = 24/310 (7%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-L 100
LF T L++++ KFG L +A +F + + + ++ GYA++ + ++ FC +
Sbjct: 110 LFQTK-LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRY 168
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
P ++ +L C D GK +H + ++V+ ++NMY+K +E
Sbjct: 169 DGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEE 228
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A+K+F+ M R+++ WN++I+ + A+EL +M Q EG PD
Sbjct: 229 AYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRM-------------QEEGKRPD 275
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T +L A A + + R ++H + GFE ++ AL+ Y++CGS+ ++ +FD
Sbjct: 276 SITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFD 335
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+MT +VSWNS++ Y +G A+++F M V+ + T + L AC+ G V++
Sbjct: 336 RMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQ 395
Query: 333 GNKVFHSMLE 342
G + H +L+
Sbjct: 396 G-RFVHKLLD 404
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 163/324 (50%), Gaps = 32/324 (9%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
HACA G+++Q +H+ +++ D+ V N LI+MY+K +D A +F+ + +
Sbjct: 384 LHACADLGDVEQGRFVHK-LLDQL-ELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHK 441
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVH 126
+VSW A+I GYAQ+G E FC + LQ P+ F++ SV+ + L K +H
Sbjct: 442 TLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIH 501
Query: 127 ALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
L ++ LD +V+VA AL++MY+K A A K+F+ M+ R+V +WN+MI + L
Sbjct: 502 GLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGK 561
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIA 243
A+ELF KMK +E + P+ TF VL AC +GLV E S+
Sbjct: 562 AALELFEKMK-------------KEVIKPNEVTFLCVLSACSHSGLV-EEGFQYFGSMKK 607
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQA---- 298
YG E A++ R ++ + KM +S + ++L A +H
Sbjct: 608 DYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGE 667
Query: 299 KEALQLFSNMNVQPDSATFVSLLS 322
K A ++F ++ PD + LL+
Sbjct: 668 KAANRIF---DLDPDDGGYHVLLA 688
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 6/202 (2%)
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
LI K G + + L+ + + GS+ + +VF + ++++LK YA + +
Sbjct: 99 LIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDD 158
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ F M V+P F LL C +++G ++ H L +G + +V
Sbjct: 159 AVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEI-HCQLIVNGFASNVFAMTGVV 217
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDS 416
++ + + EA K+ MP E D V W+ ++ ++G + A EL ++ + DS
Sbjct: 218 NMYAKCRLVEEAYKMFDRMP-ERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDS 276
Query: 417 LGFVQMSNIYCLSGSFNKARLI 438
+ V + GS R I
Sbjct: 277 ITIVSILPAVADVGSLRIGRSI 298
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 325/551 (58%), Gaps = 33/551 (5%)
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLH 121
E K W + + A+ + + LF L QY P+ F+ +SVL +C D +
Sbjct: 87 EKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSN 146
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+++H + K +++Y+ N ++++Y+ SC + EA +FE M R+V++WN MIA
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYA-SCGEMGEARLLFEKMPQRDVVTWNIMIAQLI 205
Query: 180 ACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSI 221
A +LF++M +EA+ LF +++ G+ + T
Sbjct: 206 KQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVA 265
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
VL ACA L +H ++GF+ + I+N LI Y +CG + + +VF++M
Sbjct: 266 VLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERT 325
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+VSW++++ A+HG+A+EAL+LFS+M+ ++P+ TF+ LL ACSH GL+ EG + F
Sbjct: 326 VVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA 385
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
SM ++G++PQ++HY CMVDLL R G + EA + I MPM+P+ V+W LLG+CR H
Sbjct: 386 SMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNV 445
Query: 399 RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
+AE A L +L+P + +V +SNIY +G + +RK MK +V+K PG S I +
Sbjct: 446 EMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITV 505
Query: 459 ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHS 518
+ VHEF +G + HP E IF++ EEL+ +++ GYVP TS+ L DIEE K + + HS
Sbjct: 506 DGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHS 565
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
EKLALVF +MN + + IRIMKN+RIC DCH+ KL S ++ +EIVVRD NRFH F
Sbjct: 566 EKLALVFGLMNTPA----ETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCF 621
Query: 579 KDRICSCNDYW 589
D CSC DYW
Sbjct: 622 NDNSCSCRDYW 632
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 159/339 (46%), Gaps = 35/339 (10%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+ H A G + +A L E M PQ D+ N +I K G + A LF MP
Sbjct: 169 IVHLYASCGEMGEARLLFEKM-------PQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMP 221
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----GKL 124
+RNV SWT++I+GY Q G A+E LF + + NE ++ +VL +C L G
Sbjct: 222 ERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR 281
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H + + +V ++N LI+MY K C +EA KVFE ME R V+SW++MI
Sbjct: 282 IHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG------ 335
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSL 241
A EEAL LF + + G+ P+ TF +L AC+ GL++E S+
Sbjct: 336 -------LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGR-RFFASM 387
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQ--- 297
YG ++ +R G + + + M + V W ++L A +H
Sbjct: 388 TRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEM 447
Query: 298 AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKV 336
A+EA++ ++ D +V L + + AG ++ +V
Sbjct: 448 AEEAIKHLLELDPLND-GYYVVLSNIYAEAGRWEDTARV 485
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 330/556 (59%), Gaps = 30/556 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ +I YA G +D A+ +FDE+P ++VVSW A+ISGYA+ G +E LF +
Sbjct: 142 RDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEM 201
Query: 100 LQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
++ P+E ++A+VL +C + G+ +H+ +++ + NALI++YSK C +
Sbjct: 202 MKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSK-CGE 260
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +FE +++++VISWN++I + A + + +EAL +F+++ + G
Sbjct: 261 MERAHGLFEGLQYKDVISWNTLIGGY-------------AYINHHKEALLVFQEMLKLGE 307
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLS 270
P+ T +L ACA L +H I K G +T + +LI YA+CG+I +
Sbjct: 308 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
QVFD + L S N+++ +A+HG+A A L S M ++PD TFV LLSACSHA
Sbjct: 368 NQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHA 427
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GL G K+F SM ++ + P+L+HY CM+DLLGR G EAE+LI M MEPD VIW
Sbjct: 428 GLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGS 487
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +C+ H L EL A KL ++EP + +V +SNIY S ++ +R + +
Sbjct: 488 LLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGL 547
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG S IEI++ VHEF G K HPQ + I+K LEE+ L G+V +TS L ++EE
Sbjct: 548 KKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEE 607
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L +HSEKLA+ F +++ + + +RI+KN+R+C +CH KL S + +EI
Sbjct: 608 ELKEGALSYHSEKLAIAFGLIS----TKPGTKLRIVKNLRVCRNCHEATKLISKIYKREI 663
Query: 568 VVRDSNRFHHFKDRIC 583
+ RD +RFHHFKD +C
Sbjct: 664 IARDRSRFHHFKDGMC 679
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 197/419 (47%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASV 113
F L A +F + + N +SW +I G+A + L+ ++ PN ++ +
Sbjct: 25 FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFL 84
Query: 114 LISCDY----LHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNV 168
SC GK +HA LK+ L ++V +LI+MY+++ ++A KVF+ R+V
Sbjct: 85 FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144
Query: 169 ISWNSMIAAF--RACKLEAQA----------------IELFAKMKNEEEALFLFRQLQRE 210
+S+ +MI + R +AQ I +A++ +EAL LF ++ +
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T + VL C +HS I +GF + + NALI Y++CG + +
Sbjct: 205 DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA 264
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F+ + Y D++SWN+++ YA KEAL +F M P+ T +S+L AC+H
Sbjct: 265 HGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHL 324
Query: 328 GLVQEGNKVFHSMLEN--HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ G++ ++D+ + G I A ++ + + S
Sbjct: 325 GAIDIG-RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCN 383
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+++ G HG A +++K+ +EP D + FV + + +G + R I K M
Sbjct: 384 AMIFGFAM-HGRADAAFDLLSRMKKDGIEP-DDITFVGLLSACSHAGLSDLGRKIFKSM 440
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/595 (37%), Positives = 339/595 (56%), Gaps = 34/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLH-EHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
Y + ACA G +K + H E + N F + DLFV N LI Y G A +FD
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGS---DLFVINALIQFYHNCGSFGCACDVFD 170
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNEFSLASVLISCDYL---- 120
E R+VV+W +I+ + G +E+ F L + L P+E ++ S++ +C L
Sbjct: 171 ESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLE 230
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
GK +H+ + + LD ++ V NA+++MY K C D A +VF + ++V+SW SM++
Sbjct: 231 RGKFLHSYSKELGLDENLRVNNAILDMYCK-CDDIESAQEVFNRIREKDVLSWTSMLSGL 289
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
AK +EAL LF+++Q + D T VL ACA +
Sbjct: 290 -------------AKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYI 336
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H LI K+ D V+ AL+ YA+CGSI L+ QVF +M ++ +WN+++ A+HG
Sbjct: 337 HLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHG 396
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++A+ LF M + PD TF++LL ACSHAGLV EG +F +M + P+++HY C
Sbjct: 397 EDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGC 456
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VDLL R ++ +A I MP++ +SV+W+ LLG+CR G LAE ++ +LEP
Sbjct: 457 VVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDS 516
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+V +SN+Y ++ A +RK+MK + K PG SWIE+ +H+F +G + H Q
Sbjct: 517 CGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQT 576
Query: 476 EAIFKKLEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
E I+ +EE+ ++ G+VP T+ L DIEEE KE L+ HSEKLA+ +++ S
Sbjct: 577 EQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPS-- 634
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S IRI+KN+R+C DCH+F+K+ S + +EIV RD +RFHHFK+ CSC D+W
Sbjct: 635 --GSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 161/347 (46%), Gaps = 33/347 (9%)
Query: 109 SLASVLISCDYLHG--------KLVHALALKFSLDAHVYVANALINMYSKSCADE---AW 157
S + LIS D+L K HAL L+ L + ++ LI+ + S + + A
Sbjct: 6 SKCTKLISVDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYAR 65
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K+F M+ + N+MI + A+ +N EA+ L+ + G+ D
Sbjct: 66 KLFTQMQNPDPFICNTMIRGY-------------ARSQNPYEAVSLYYFMVERGVPVDNY 112
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+ VL ACA L + H + K GF D + NALI Y CGS + VFD+
Sbjct: 113 TYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDES 172
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEG 333
T D+V+WN ++ A+ G +++A L M N++PD T VSL+ AC+ G ++ G
Sbjct: 173 TVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG 232
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K HS + G+ L ++D+ + I A+++ + E D + W+ +L
Sbjct: 233 -KFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRI-REKDVLSWTSMLSGLA 290
Query: 394 KHG--ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
K G + LA +L ++E D + V + + +G+ ++ + I
Sbjct: 291 KSGYFQEALALFQKMQLNKIEL-DEITLVGVLSACAQTGALDQGKYI 336
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 334/567 (58%), Gaps = 39/567 (6%)
Query: 34 NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE------MPKRNVVSWTALISGYAQHG 87
N N P + LI +++ G +D+AR +F++ +P+ W A+ GY+++G
Sbjct: 103 NLLNNPT---LKGKLITLFSVCGRVDEARRVFEDGGEDVDLPES---VWVAMGIGYSRNG 156
Query: 88 NAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVAN 142
+E L+ ++ Q+ F+ + L +C D G+ VHA LK + D V N
Sbjct: 157 YPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNN 216
Query: 143 ALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEAL 201
AL+ +YS+ C +EA ++F+ M RN++SWNS+IA K + EA+
Sbjct: 217 ALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGL-------------VKKEGVFEAI 263
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
FR +Q +GM W T + +L CA + +H++I K + D + N+L+ Y
Sbjct: 264 EAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMY 323
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
A+CG++ ++VF+ M DL SWN+++ YA++G+ EA++ F M PD TF+
Sbjct: 324 AKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFI 383
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+LLS CSHAGL +G ++F M +HG+ P ++HYAC+VD+LGR GRI EA ++++ MP
Sbjct: 384 ALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPF 443
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
+P IW LL SCR HG LAE A +L +LEP ++ +V +SNIY +G + +++
Sbjct: 444 KPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVV 503
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL-EELIGQLKGMGYVPE 497
R+ M+ + K G SW++I++++H F +GG + +KK+ + L+ ++ +GYVP+
Sbjct: 504 REFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPD 563
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T + LHD+ EE + + HSE+LA +FA++N S IRI KN+R+CVDCH+++K
Sbjct: 564 TGVVLHDVSEEMRAMWVCGHSERLATMFALINTAS----GMPIRITKNLRVCVDCHSWVK 619
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICS 584
S + G+ IV+RD+NRFHHFKD +CS
Sbjct: 620 TLSKVTGRVIVLRDTNRFHHFKDGVCS 646
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/561 (37%), Positives = 323/561 (57%), Gaps = 40/561 (7%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
E D FV +++MYAKFG + DAR +FD + ++VV +TALI GY QHG E +F
Sbjct: 133 EVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFE 192
Query: 98 SLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-S 151
++ PNE++LASVL+SC D ++GKL+H L +K+ L++ V +L+ MYSK +
Sbjct: 193 DMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCN 252
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+++ KVF ++ + + ++W S I + EE AL +FR++ R
Sbjct: 253 MVEDSIKVFNSLAYASHVTWTSFIVGL-------------VQNGREEVALSMFREMMRCS 299
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
++P+ T S +L AC+ L +H++ K G + + + ALIH Y +CG++ ++
Sbjct: 300 ISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKAR 359
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAG 328
VFD +T D+VS N+++ AYA +G EAL+LF + ++P+ TF+S+L AC++AG
Sbjct: 360 SVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAG 419
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV+EG ++F + NH + DHY CM+DLLGR R EA LI E PD + W L
Sbjct: 420 LVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTL 478
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +C+ HGE +AE K+ P D + ++NIY +G ++ ++ + R++
Sbjct: 479 LNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLK 538
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K P +SW++I+ VH F +G HP+ I + L ELI ++ +GY P+T L D+EEE
Sbjct: 539 KTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEE 598
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K LY+HSEKLA+ FA+ C + + IRI KN+R+C G I+
Sbjct: 599 KKISALYYHSEKLAIAFALWKT---CGKNTAIRIFKNLRVC--------------GDYII 641
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
RD+ RFHHFK ICSC DYW
Sbjct: 642 ARDAKRFHHFKGGICSCKDYW 662
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 200/418 (47%), Gaps = 30/418 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y +L C ++ LH H++ + F + LI+ Y K + +AR LFDE
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFS---FFGHKLIDGYIKCSVITEARKLFDE 60
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HG 122
MP R++V+W ++IS + G +E L+ ++L + P+ ++ +++ + + G
Sbjct: 61 MPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 123 KLVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
+ H LA+ + + +VA +++MY+K +A VF+ + ++V+ + ++I +
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L+ +A+E+F M + P+ T + VL +C L + +H
Sbjct: 181 HGLDGEALEVFEDMVGSR-------------IKPNEYTLASVLVSCGNLGDLVNGKLIHG 227
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L+ KYG E +L+ Y++C + S +VF+ + Y V+W S + +G+ +
Sbjct: 228 LVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEV 287
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL +F M ++ P+ T S+L ACS +++ G ++ H++ GV A ++
Sbjct: 288 ALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQI-HAVTVKLGVDGNKFVDAALI 346
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEP 413
L G+ G + +A + + E D V + ++ + ++G A +LK+ LEP
Sbjct: 347 HLYGKCGNVEKARSVFDSLT-ELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEP 403
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/611 (35%), Positives = 343/611 (56%), Gaps = 49/611 (8%)
Query: 15 CALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVV 74
C H A ++H ++ + N+ Q L N L++ Y K L DA +LFDEMP+R+ V
Sbjct: 12 CTKHQAPLNAKKIHAQIVKSGLNQCQPL--PNTLLDAYGKCNLLQDAHYLFDEMPQRDHV 69
Query: 75 SWTALISGYAQHGNAEECFRLFCSLLQYFF------PNEFSLASVLISCDYL----HGKL 124
SW ++++ Y Q + +F Y F P+ F A++L +C L GK
Sbjct: 70 SWASILTAYNQAKLPNKTLSIF----HYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQ 125
Query: 125 VHALALKFSLDAHV---YVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
VHA +F L V V ++L++MY+K A VF+++ + +SW +M++ +
Sbjct: 126 VHA---RFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYAR 182
Query: 181 CKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGM-APDWCTFSI 221
L+ +A+ELF + + ++F +++REG+ D S
Sbjct: 183 SGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSS 242
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
V+ ACA L +H L+ G+E I+NAL+ YA+C I ++ VF++M + D
Sbjct: 243 VVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRD 302
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+VSW SI+ A HG+AKEAL L+ M ++P+ TFV L+ ACSHAGLV +G K+F
Sbjct: 303 VVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFK 362
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+M+E++ + P L + C +DLL R G + EAE LI+ MP +PD W+ LL +C+ HG T
Sbjct: 363 AMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNT 422
Query: 399 RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
+ A +L L + +V +SN+Y +G + + +RK M V++ PG S I++
Sbjct: 423 EMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDL 482
Query: 459 ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHS 518
F +G HP ++ IF L+EL +++ GY+P+TS LHD+EE+ KE +L+ HS
Sbjct: 483 GKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHS 542
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
E+ A+ + ++ +VIRI+KN+RIC DCH F+KL S ++ KEI+VRD+ R+HHF
Sbjct: 543 ERWAVAYGLLK----AVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHF 598
Query: 579 KDRICSCNDYW 589
KD CSCND+W
Sbjct: 599 KDGRCSCNDFW 609
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 170/376 (45%), Gaps = 89/376 (23%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+YATL ACA +++ Q+H + + P D+ V + L++MYAK G AR +FD
Sbjct: 106 VYATLLKACASLCSLRLGKQVHARFVLS-PFVDDDV-VKSSLVDMYAKCGLPSIARSVFD 163
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF---------------CSLLQ--------YF 103
+ + VSWTA++SGYA+ G +E LF L+Q Y
Sbjct: 164 SILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYM 223
Query: 104 F----------PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYS 149
F + L+SV+ +C L GK +H L + ++ ++++NAL++MY+
Sbjct: 224 FIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYA 283
Query: 150 KSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K C+D A VF M R+V+SW S+I A+ +EAL L+ Q+
Sbjct: 284 K-CSDILAARNVFNRMLHRDVVSWTSIIVG-------------AAQHGRAKEALDLYDQM 329
Query: 208 QREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ P+ TF ++ AC AGLV++ + A+I Y
Sbjct: 330 VLAEIKPNEVTFVGLIYACSHAGLVSKGRK-----------------LFKAMIEDY---- 368
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS 325
IS S Q+F + DL+S + G EA L M +PD T+ +LLSAC
Sbjct: 369 RISPSLQLF--TCFLDLLSRS---------GHLNEAEDLIKTMPHKPDEPTWAALLSACK 417
Query: 326 HAGLVQEGNKVFHSML 341
H G + G ++ +L
Sbjct: 418 HHGNTEMGVRIADRLL 433
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 12/218 (5%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
LK C +A +H+ I K G + N L+ AY +C + + +FD+M D
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
VSW SIL AY + L +F M +QPD + +LL AC+ ++ G +V H
Sbjct: 69 VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQV-H 127
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG-- 396
+ V + +VD+ + G A + + ++ SV W+ +L + G
Sbjct: 128 ARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVK-TSVSWTAMLSGYARSGLK 186
Query: 397 ETRLAELAATKLKQLEPGDSL--GFVQMSNIYCLSGSF 432
+ + T ++ L +L G VQ YC+ G +
Sbjct: 187 DEAMELFLRTPVRNLYSWTALISGLVQSG--YCIDGCY 222
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/590 (36%), Positives = 329/590 (55%), Gaps = 37/590 (6%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
+ + PN + + T +I Y K LD A+ + K+ V+W A+ISGYA G
Sbjct: 214 LFDEMPNRDELSWTT--IITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYL 271
Query: 91 ECFRLFCSLLQYFFP-NEFSLASVLISCD----YLHGKLVHALALKF----SLDAHVYVA 141
E F +F ++ +EF+ SV+ C + GK +HA LK + D + V
Sbjct: 272 EAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVN 331
Query: 142 NALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--- 197
NALI Y K D A ++F M R+++SWN +++ + + +A F +M +
Sbjct: 332 NALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNIL 391
Query: 198 ---------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
EEAL F +++ +G P F+ + +C+ L + +H +H+ +
Sbjct: 392 SWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQV 451
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+YG+E NALI YARCG + + +F M D +SWN+++ A HGQ +A+
Sbjct: 452 VRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAI 511
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF M + PD +F++++SACSHAGLV+EG K F SM +GV P +HYA ++DL
Sbjct: 512 ELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDL 571
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
L R G+ EA++++ MP EP + IW LL CR HG L AA +L +L+P +
Sbjct: 572 LCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTY 631
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V +SN+Y ++G +N +RK M+ V+K PG SWIE+EN+VH F G HP+ I+
Sbjct: 632 VLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIY 691
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
LE+L+ +++ +GYVP+T LHD+E + KE +L HSEKLA+ + M +
Sbjct: 692 NYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMK----LPHGAT 747
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R+ KN+RIC DCHN K S ++G+EIVVRD RFHHF+D CSC DYW
Sbjct: 748 VRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 225/538 (41%), Gaps = 114/538 (21%)
Query: 8 YATLFHACALHGNIKQAM--QLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
Y +L C L I ++ +H HMI + F +P+ + N LI++Y+K L+ AR+L
Sbjct: 14 YGSLLQICCLQSPISYSLARPVHAHMIASGF--QPRG-HILNRLIDIYSKSSKLNYARYL 70
Query: 65 FDEMPKRNVVSWTALISGYAQHG---------------------------------NAEE 91
FDE+P+ ++V+ T LI+ Y+ G +
Sbjct: 71 FDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHA 130
Query: 92 CFRLFCSLLQ-YFFPNEFSLASV-----LISCDYLHGKLVHALALKFSLDAHVYVANALI 145
LFC + + F P+ ++ SV L++ H + +H +K V NALI
Sbjct: 131 AIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALI 190
Query: 146 NMYSKSCAD----------EAWKVFENMEFRNVISWNSMIAAF-RACKLEAQA------- 187
+ Y K A EA K+F+ M R+ +SW ++I + + L+A
Sbjct: 191 SSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTS 250
Query: 188 ----------IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
I +A EA +FR++ + D TF+ V+ CA R
Sbjct: 251 KKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKE 310
Query: 238 VHS----LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY- 292
+H+ +A + + NALI Y +CG + +++++F+KM DLVSWN IL Y
Sbjct: 311 MHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYV 370
Query: 293 ------------------------------ALHGQAKEALQLFSNMNVQ---PDSATFVS 319
A G A+EAL+ F+ M +Q P F
Sbjct: 371 NVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAG 430
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+ +CS G ++ G ++ H+ + +G L ++ + R G + A L MP
Sbjct: 431 AIISCSVLGSLKHGRQL-HAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPC- 488
Query: 380 PDSVIWSVLLGSCRKHGE-TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
D++ W+ ++ + +HG+ T+ EL LK+ D + F+ + + +G + R
Sbjct: 489 VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGR 546
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A +C++ G++K QLH ++ L N LI MYA+ G +D A LF
Sbjct: 428 FAGAIISCSVLGSLKHGRQLHAQVVRY--GYESSLSAGNALITMYARCGVVDAAHCLFIN 485
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVH 126
MP + +SW A+I+ QHG + LF +L + P+ S +V+ +C H LV
Sbjct: 486 MPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACS--HAGLVK 543
Query: 127 ALALKFSLDAHVYVANA-------LINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAA 177
F +VY N +I++ ++ EA +V E+M F W +++A
Sbjct: 544 EGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAG 603
Query: 178 FRA---CKLEAQAIELFAKMKNEEEALFLF 204
R L +A E ++K + + ++
Sbjct: 604 CRIHGNIDLGIEAAERLFELKPQHDGTYVL 633
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 334/591 (56%), Gaps = 39/591 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L G + +A +L + M + +D+ +++ Y + G + +AR LFDE
Sbjct: 146 YTVLLGGFLDAGRVNEARKLFDEMPD------KDVVARTAMLSGYCQAGRITEARALFDE 199
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
MPKRNVVSWTA+ISGYAQ+G +LF + NE S ++L+ Y+ V
Sbjct: 200 MPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR---NEVSWTAMLVG--YIQAGHVED 254
Query: 128 LALKFSL--DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
F+ D V NA++ + + D A +FE M R+ +W++MI +
Sbjct: 255 AEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYE----- 309
Query: 185 AQAIELFAKMKNE--EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+NE EAL FR++ G+ P++ +F +L CA L T + +H+ +
Sbjct: 310 ----------QNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAM 359
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ F+ D +ALI Y +CG++ +K+VF+ D+V WNS++ YA HG +EAL
Sbjct: 360 LRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEAL 419
Query: 303 QLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F ++ + PD T++ +L+ACS+ G V+EG ++F+SM N + HY+CMVDL
Sbjct: 420 GIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDL 479
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G + EA LI MP+EPD++IW L+G+CR H +AE+AA KL +LEPG + +
Sbjct: 480 LGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPY 539
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAI 478
V +S+IY +G + A +RK + + K PG SWIE VH F SG HP+ I
Sbjct: 540 VLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAII 599
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
LEEL G L GY + S LHD++EE K + L +HSE+ A+ + ++ +
Sbjct: 600 LNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPA----GM 655
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+R+C DCH+ +KL + + +EI++RD+NRFHHFKD +CSC DYW
Sbjct: 656 PIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/472 (20%), Positives = 182/472 (38%), Gaps = 99/472 (20%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF----- 96
+ N I + G ++ AR FD MP R S+ ALI+GY ++ + LF
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 97 ------------CSLLQYFFPN-EFSLASVLISCDYL-----------HGKLVHALALKF 132
SL ++ P+ +LAS+ + + HG L A+ L
Sbjct: 77 RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136
Query: 133 SL--------------------------------DAHVYVANALINMYSKSC-ADEAWKV 159
+ D V A+++ Y ++ EA +
Sbjct: 137 QMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARAL 196
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ M RNV+SW +MI+ + A +LF M + E W
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEV--------------SWTAM 242
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA-NALIHAYARCGSISLSKQVFDKMT 278
+ G + H L D V A NA++ + + G + +K +F++M
Sbjct: 243 LV------GYIQAGHVEDAEDLF--NAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMC 294
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D +W++++K Y + EAL F M ++P+ +F+S+L+ C+ G +
Sbjct: 295 ARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRE 354
Query: 336 VFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEAEKLIREMPMEP-DSVIWSVLLGSC 392
+ +ML D +A ++ + + G + +A+++ EP D V+W+ ++
Sbjct: 355 LHAAMLR---CSFDTDVFAVSALITMYIKCGNLDKAKRVFNM--FEPKDVVMWNSMITGY 409
Query: 393 RKH--GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+H GE L +L ++ P D + ++ + +G + R I M
Sbjct: 410 AQHGLGEEALGIFDDLRLARMAP-DGITYIGVLTACSYTGKVKEGREIFNSM 460
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 328/559 (58%), Gaps = 27/559 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF---- 96
++FV L++MY+KFG + AR LF+ M +RNVV+W A++SGY+ HG +EE LF
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMR 215
Query: 97 --CSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMY-SKSCA 153
L+ ++ AS+ + C + G +H ++ + ++ AL+++Y S +C
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQV-GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCV 274
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+A +VF M ++V +W M+ F + + +AI+ F KM L + +
Sbjct: 275 DDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM------------LGIQNLK 322
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D +L +C+ + VH+L K F ++ + +A+I YA CG++ +K+
Sbjct: 323 LDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F M D+V WN+++ ++G +A+ LF M + PD +TFVS+L ACSHAG+V
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG ++F+ M++ V+P L HYAC++D+LGR G++ A I MP +PD ++S LLG
Sbjct: 443 YEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR HG +L + K+ ++EP D+ +V +SN+Y L+G++ ++ R ++ R++K
Sbjct: 503 ACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKD 562
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IEI ++ F +G K HPQ I L+ LI ++K GYVP T++ L D+ ++ K
Sbjct: 563 PGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMK 622
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
++ LYHHSEK+A+ F +M + ++IRI KN+R C DCH K S + G+ +V++
Sbjct: 623 KDILYHHSEKMAIAFGLMRT----KPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIK 678
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFH F+D +CSC DYW
Sbjct: 679 DANRFHVFQDGVCSCRDYW 697
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 204/409 (49%), Gaps = 29/409 (7%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++K Q+H +I + + F++N L+N Y G L DA+ +F P +NVVSWT L
Sbjct: 36 DLKPLQQIHAQIITS--GLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93
Query: 80 ISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
ISG A++ E +F ++ F PN +++SVL + L K VH ++
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+ +V+V AL++MYSK C A ++FE+M RNV++WN++++ + +AI+LF
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
M+ R+G+ D+ T ++ A + + + +H I + G+E+D I
Sbjct: 214 MR-------------RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHI 260
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----N 309
AL+ Y + + +VF +M+ D+ +W +L ++ A++ F+ M N
Sbjct: 261 KTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
++ DS + +LS+CSH+G +Q+G +V H++ + + ++D+ G + +A
Sbjct: 321 LKLDSIALMGILSSCSHSGALQQGRRV-HALAIKTCFANNIFVGSAVIDMYANCGNLEDA 379
Query: 370 EKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDS 416
++ M E D V W+ ++ +G + K L+P +S
Sbjct: 380 KRFFYGMG-EKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDES 427
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/582 (35%), Positives = 330/582 (56%), Gaps = 36/582 (6%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G I+ A ++ + M E + + + N LI + ++DA+ LF M R+ ++WT
Sbjct: 195 GLIRDARRVFQEM------EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTT 248
Query: 79 LISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFS 133
+++G Q+G E +F + + ++++ S+L +C L GK +HA +
Sbjct: 249 MVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTW 308
Query: 134 LDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF--RACKLEAQAIEL 190
+ +V+V +AL++MYSK + A VF M RN+ISW +MI + AC
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC--------- 359
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
EEA+ F ++Q +G+ PD T V+ +CA L + + H L G
Sbjct: 360 ------SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
++NAL+ Y +CGSI + ++FD+M++HD VSW +++ YA G+AKE + LF M
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLA 473
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
++PD TF+ +LSACS AGLV++G F SM ++HG+VP DHY CM+DL R GR
Sbjct: 474 NGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFK 533
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 427
EAE+ I++MP PD+ W+ LL SCR G + + AA L + +P + +V + +++
Sbjct: 534 EAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHA 593
Query: 428 LSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIG 487
G + + +R+ M+ +V+K PG SWI+ +N+VH F++ + HP I++KLE L
Sbjct: 594 AKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNS 653
Query: 488 QLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
++ GY P+ S LHD+ + K + HHSEKLA+ F ++ + IRI+KN+R
Sbjct: 654 KMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLI----FVPQEMPIRIVKNLR 709
Query: 548 ICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+CVDCHN K S + G++I+VRD+ RFH F D CSC D+W
Sbjct: 710 VCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 222/454 (48%), Gaps = 65/454 (14%)
Query: 8 YATLFHACALHGN---IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
YA + + A G ++ A +H ++ F P F+ NHL+ YAK G L AR +
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPT-FLLNHLLTAYAKSGRLARARRV 70
Query: 65 FDEMP-------------------------------KRNVVSWTALISGYAQHGNAEECF 93
FDEMP +R+ VS+ ALI+G++ G+
Sbjct: 71 FDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSV 130
Query: 94 RLFCSLL--QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINM 147
+L+ +LL + P +L+++++ L G VH L+ A+ +V + L++M
Sbjct: 131 QLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDM 190
Query: 148 YSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE-------- 198
Y+K +A +VF+ ME + V+ +N++I CK+ A LF M + +
Sbjct: 191 YAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMV 250
Query: 199 ----------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
EAL +FR+++ EG+ D TF +L AC L +H+ I + +E
Sbjct: 251 TGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYE 310
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
D+ + +AL+ Y++C SI L++ VF +MT +++SW +++ Y + ++EA++ FS M
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
++PD T S++S+C++ ++EG + FH + G++ + +V L G+ G
Sbjct: 371 QMDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGS 429
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
I +A +L EM D V W+ L+ + G+ +
Sbjct: 430 IEDAHRLFDEMSFH-DQVSWTALVTGYAQFGKAK 462
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 323/544 (59%), Gaps = 35/544 (6%)
Query: 61 ARHLFDEMPKR-NVVSWTALISGYAQHGNAEECFRLFCSLL--------QYFFPNEFSLA 111
A +F ++ K NV W LI GYA+ GN+ F L+ + + +P F +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYP--FLIK 129
Query: 112 SVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVI 169
+V D G+ +H++ ++ + +YV N+L+++Y+ +C D A+KVF+ M ++++
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEKDLV 188
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
+WNS+I F A+ EEAL L+ ++ +G+ PD T +L ACA +
Sbjct: 189 AWNSVINGF-------------AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
VH + K G + +N L+ YARCG + +K +FD+M + VSW S++
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 290 KAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
A++G KEA++LF M + P TFV +L ACSH G+V+EG + F M E +
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ P+++H+ CMVDLL R G++ +A + I+ MPM+P+ VIW LLG+C HG++ LAE A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
++ QLEP S +V +SN+Y ++ + IRK+M V+K PG S +E+ NRVHEF
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
G K HPQ +AI+ KL+E+ G+L+ GYVP+ S D+EEE KE + +HSEK+A+ F
Sbjct: 476 LMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAF 535
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
+++ ERS I ++KN+R+C DCH +KL S + +EIVVRD +RFHHFK+ CSC
Sbjct: 536 MLISTP----ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSC 591
Query: 586 NDYW 589
DYW
Sbjct: 592 QDYW 595
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 149/306 (48%), Gaps = 24/306 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T Y L A +++ +H +I + ++V N L+++YA G + A +
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRS--GFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH-- 121
FD+MP++++V+W ++I+G+A++G EE L+ + + P+ F++ S+L +C +
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH +K L +++ +N L+++Y++ +EA +F+ M +N +SW S+I
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
+AIELF M++ EG+ P TF +L AC+ G+V E
Sbjct: 299 AVNGFGKEAIELFKYMEST------------EGLLPCEITFVGILYACSHCGMVKEGF-E 345
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALH 295
+ +Y E ++ AR G + + + M ++V W ++L A +H
Sbjct: 346 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 296 GQAKEA 301
G + A
Sbjct: 406 GDSDLA 411
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/594 (35%), Positives = 327/594 (55%), Gaps = 31/594 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YAT+ +C L ++ QLH ++ D + L+++YA G++ AR +FDE
Sbjct: 71 YATILRSCVLSRAVRPGRQLHARLL--VSGTGLDAVLATRLVDLYASCGHVSLARRVFDE 128
Query: 68 MPKR-NVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYL 120
MP + NV W LI YA+ G E L+ ++L Y P+ F+ VL +C D
Sbjct: 129 MPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLS 188
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ VH ++ + V+V LI+MY+K C DEAW VF + R+ WNSMIAA
Sbjct: 189 AGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAAC- 247
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ EAL L R + EG+AP T + A A +H
Sbjct: 248 ------------GQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELH 295
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ GF + +L+ YA+ G + ++ +F+++ + +L+SWN+++ + +HG A
Sbjct: 296 GYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHAD 355
Query: 300 EALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
A +LFS M V PD TFV +LSAC+H G+VQE +VF M+ + + P + HY C
Sbjct: 356 HAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTC 415
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VD+LG GR EA +I+ M ++PDS IW LL C+ H LAELA KL +LEP D
Sbjct: 416 LVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPED 475
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +V +SNIY SG + +A +RK M ++K SWIE++ + H F G HP+
Sbjct: 476 AGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRS 535
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+++LE L G + GYVP+T+ H++E++ K ++ HSE+LA+ F +++
Sbjct: 536 DDIYEELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPP--- 592
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ + + KN+R+C DCH +KL S + +EI++RD NR+HHF + CSC D+W
Sbjct: 593 -RTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/577 (37%), Positives = 332/577 (57%), Gaps = 33/577 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+LFV I+M++ +D AR +FD VV+W ++SGY + ++ LF +
Sbjct: 141 NLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEME 200
Query: 101 QY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ PN +L +L +C L GK ++ ++ ++ + N LI+M++ +C
Sbjct: 201 KRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFA-ACGEM 259
Query: 154 DEAWKVFENMEFRNVISWNSMIAAF------------------RACKLEAQAIELFAKMK 195
DEA VF+NM+ R+VISW S++ F R I+ + +M
Sbjct: 260 DEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMN 319
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL LFR++Q + PD T +L ACA L V + I K ++DT + N
Sbjct: 320 RFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGN 379
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI Y +CG++ +K+VF +M + D +W +++ A++G +EAL +FSNM ++ P
Sbjct: 380 ALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITP 439
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D T++ +L AC+HAG+V++G F SM HG+ P + HY CMVDLLGR GR+ EA ++
Sbjct: 440 DEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEV 499
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
I MP++P+S++W LLG+CR H +LAE+AA ++ +LEP + +V + NIY +
Sbjct: 500 IVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRW 559
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
R +RK M ++K PG S +E+ V+EF +G + HPQ + I+ KLE ++ L
Sbjct: 560 ENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKA 619
Query: 493 GYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDC 552
GY P+TS D+ EE KE LY HSEKLA+ +A+++ G IRI+KN+R+CVDC
Sbjct: 620 GYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGP----GITIRIVKNLRMCVDC 675
Query: 553 HNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
H+ KL S+ +E++VRD RFHHF+ CSCN++W
Sbjct: 676 HHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 189/409 (46%), Gaps = 62/409 (15%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEF 108
G + AR +FD +P+ + W +I GY++ + + ++ +L ++ FP F
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFP--F 112
Query: 109 SLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRN 167
L + +GK++ A+K D++++V A I+M+S D A KVF+ +
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
V++WN M++ + ++K +++ LF ++++ G++P+ T ++L AC+
Sbjct: 173 VVTWNIMLSGYN-------------RVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACS 219
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
L ++ I E + ++ N LI +A CG + ++ VFD M D++SW S
Sbjct: 220 KLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTS 279
Query: 288 ILKAYALHGQAK-------------------------------EALQLFSNM---NVQPD 313
I+ +A GQ EAL LF M NV+PD
Sbjct: 280 IVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPD 339
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T VS+L+AC+H G ++ G V + ++ + + ++D+ + G + +A+K+
Sbjct: 340 EFTMVSILTACAHLGALELGEWV-KTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVF 398
Query: 374 REMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFV 420
+EM D W+ ++ + HGE LA + + P D + ++
Sbjct: 399 KEMH-HKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITP-DEITYI 445
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 57/324 (17%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE--------- 90
++L + N LI+M+A G +D+A+ +FD M R+V+SWT++++G+A G +
Sbjct: 241 RNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQI 300
Query: 91 ----------------------ECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GK 123
E LF + + P+EF++ S+L +C +L G+
Sbjct: 301 PERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE 360
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRAC 181
V K S+ +V NALI+MY K C + +A KVF+ M ++ +W +MI
Sbjct: 361 WVKTYIDKNSIKNDTFVGNALIDMYFK-CGNVGKAKKVFKEMHHKDKFTWTAMIVG---- 415
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
A + EEAL +F + + PD T+ VL AC AG+V E+ S
Sbjct: 416 ---------LAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMV-EKGQSFFI 465
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQA 298
S+ ++G + + ++ R G + + +V M + + W S+L A +H
Sbjct: 466 SMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNV 525
Query: 299 KEA-LQLFSNMNVQPDSATFVSLL 321
+ A + + ++P++ LL
Sbjct: 526 QLAEMAAKQILELEPENGAVYVLL 549
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 157/351 (44%), Gaps = 33/351 (9%)
Query: 109 SLASVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADEAWK------VFE 161
S S+L C ++ K +H+ +K L + +I CA E+ K VF+
Sbjct: 9 SPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAF---CCAHESGKMIYARQVFD 65
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
+ + WN+MI + +++ + + + ++ + + PD TF
Sbjct: 66 AIPQPTLFIWNTMIKGY-------------SRINHPQNGVSMYLLMLASNIKPDRFTFPF 112
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
+LK + ++ + + K+GF+ + + A IH ++ C + L+++VFD +
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+V+WN +L Y Q K++ LF M V P+S T V +LSACS ++ G ++
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232
Query: 339 SMLENHGVVPQ-LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ N G+V + L ++D+ G + EA+ + M D + W+ ++ G+
Sbjct: 233 YI--NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFANIGQ 289
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
+LA Q+ D + + M + Y F +A + +EM+ S V+
Sbjct: 290 I---DLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVK 337
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 308/541 (56%), Gaps = 35/541 (6%)
Query: 77 TALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLHGKLVHALALKFSLD 135
+ +++ YA G+ + +F + YF FP F L S + GK VH L L+ L
Sbjct: 109 SKMVAFYASSGDIDSSVSVFNGIGDYFTFP--FVLKSSVELLSVWMGKCVHGLILRIGLQ 166
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+YVA +LI +Y K C + +A KVF+NM R+V SWN+++A + A+ +F +
Sbjct: 167 FDLYVATSLIILYGK-CGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFER 225
Query: 194 M--KN----------------EEEALFLFRQLQRE--GMAPDWCTFSIVLKACAGLVTER 233
M +N ++AL LF ++ +E G+ P+W T VL ACA L T
Sbjct: 226 MPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLE 285
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD--LVSWNSILKA 291
+H L + G + + AL YA+CGS+ ++ FDK+ ++ L++WN+++ A
Sbjct: 286 RGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 345
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
YA +G +A+ F M +QPD TF LLS CSH+GLV G K F+ M + + P
Sbjct: 346 YASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINP 405
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
+++HYAC+ DLLGR GR+ EA KL+ EMPM IW LL +CRKH +AE AA KL
Sbjct: 406 RVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKL 465
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
LEP ++ +V +SN+Y +G + + +R +K +K PG SWIEI + H F G
Sbjct: 466 FVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGG 525
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HPQ + I+ LE L ++K GY P+TS LHDI EE KE L HSEKLA+ F I+
Sbjct: 526 DTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGIL 585
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
N + +V+R+ KN+RIC DCH M S++ G+E++VRD NRFHHFK CSC DY
Sbjct: 586 NTPA----ETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDY 641
Query: 589 W 589
W
Sbjct: 642 W 642
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 164/339 (48%), Gaps = 47/339 (13%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G I A ++ ++M +D+ N L+ Y K G +D A +F+ MP RN+VSWT
Sbjct: 183 GEINDAGKVFDNMTI------RDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTT 236
Query: 79 LISGYAQHGNAEECFRLFCSLLQY---FFPNEFSLASVLISCDYL----HGKLVHALALK 131
+ISGY+Q G A++ LF +++ PN ++ SVL +C L G+ +H LA +
Sbjct: 237 MISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACR 296
Query: 132 FSLDAHVYVANALINMYSKSCAD--EAWKVFE--NMEFRNVISWNSMIAAFRACKLEAQA 187
L+++ V AL MY+K C +A F+ N +N+I+WN+MI A
Sbjct: 297 MGLNSNASVLIALTAMYAK-CGSLVDARNCFDKLNRNEKNLIAWNTMITA---------- 345
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA-------GLVTERHASAVHS 240
+A + +A+ FR++ + G+ PD TF+ +L C+ GL H S +S
Sbjct: 346 ---YASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYS 402
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQAK 299
+ + E +A+ L R G ++ + ++ +M S W S+L A H +
Sbjct: 403 INPR--VEHYACVADLL----GRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLE 456
Query: 300 EALQLFSNMNV-QP-DSATFVSLLSACSHAGLVQEGNKV 336
A + V +P ++ +V L + + AG QE +K+
Sbjct: 457 MAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKL 495
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/590 (35%), Positives = 339/590 (57%), Gaps = 38/590 (6%)
Query: 19 GNIKQAMQLHE-------HMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
G +K + LH+ H ++ +D V N +++ Y+K + + R LFDEMP+
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSL-------LQYFFPNEFSLASVLISCDYLHGKL 124
+ VS+ +IS Y+Q E F + + F S+A+ L S G+
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM--GRQ 372
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H AL + D+ ++V N+L++MY+K +EA +F+++ R +SW ++I+ + L
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGL 432
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
++LF KM+ + D TF+ VLKA A + +H+ I
Sbjct: 433 HGAGLKLFTKMRGS-------------NLRADQSTFATVLKASASFASLLLGKQLHAFII 479
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G ++ + L+ YA+CGSI + QVF++M + VSWN+++ A+A +G + A+
Sbjct: 480 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIG 539
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M +QPDS + + +L+ACSH G V++G + F +M +G+ P+ HYACM+DLL
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL 599
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGF 419
GR GR EAEKL+ EMP EPD ++WS +L +CR H LAE AA KL +E D+ +
Sbjct: 600 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY 659
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V MSNIY +G + K R ++K M+ ++K P SW+E+ +++H F+S + HP + I
Sbjct: 660 VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIV 719
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+K+ EL +++ GY P+TS + D++E+ K E L +HSE+LA+ FA+++ C
Sbjct: 720 RKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCP---- 775
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I +MKN+R C DCH +KL S ++ +EI VRD++RFHHF + +CSC DYW
Sbjct: 776 IVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 187/392 (47%), Gaps = 36/392 (9%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G + A ++++ M + ++ TN +I+ + K G + AR LFD MP R VV+WT
Sbjct: 62 GQVSAARKVYDEMPH------KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTI 115
Query: 79 LISGYAQHGNAEECFRLF---CSLLQYFFPNEFSLASVLISCDYLHGK----LVHALALK 131
L+ YA++ + +E F+LF C P+ + ++L C+ + VHA A+K
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 132 FSLDAHVY--VANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
D + + V+N L+ Y + D A +FE + ++ +++N++I + L ++I
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
LF KM+ + G P TFS VLKA GL +H+L GF
Sbjct: 236 HLFLKMR-------------QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN- 307
D + N ++ Y++ + ++ +FD+M D VS+N ++ +Y+ Q + +L F
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 308 --MNVQPDSATFVSLLSACSHAGLVQEGNKVF-HSMLENHGVVPQLDHYACMVDLLGRVG 364
M + F ++LS ++ +Q G ++ ++L + + + +VD+ +
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN--SLVDMYAKCE 400
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
EAE + + +P + +V W+ L+ + G
Sbjct: 401 MFEEAELIFKSLP-QRTTVSWTALISGYVQKG 431
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 40/197 (20%)
Query: 238 VHSLIAKYGFEDD-------------------------------TVIANALIHAYARCGS 266
V + I K GF+ D TV N +I + + G
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLL 321
+S ++ +FD M +V+W ++ YA + EA +LF M PD TF +LL
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 322 SACSHAGLVQEGNKVFHSMLENHG--VVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
C+ A + Q H+ G P L ++ V R+ A L E+P E
Sbjct: 155 PGCNDA-VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP-E 212
Query: 380 PDSVIWSVLLGSCRKHG 396
DSV ++ L+ K G
Sbjct: 213 KDSVTFNTLITGYEKDG 229
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/605 (38%), Positives = 336/605 (55%), Gaps = 48/605 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---------------GYL 58
+CA G A LH I + D F N L+N+ K G L
Sbjct: 58 SCAGLGLCTLAASLHALAIRS--GSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGL 115
Query: 59 DDA-----RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLAS 112
+ A R +FDEM +R+ VSW LI G A+H +E + + + F P+ F+L++
Sbjct: 116 ESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLST 175
Query: 113 VLI----SCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRN 167
VL D G +VH A+K D V+V ++LI+MY+ + D + KVF++ +
Sbjct: 176 VLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCD 235
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
+ WNSM+A + A+ + EEAL +FR++ + G+ P TFS ++ A
Sbjct: 236 AVLWNSMLAGY-------------AQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFG 282
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
L R +H+ + + F D+ I+++LI Y +CG++ ++++VF+ + D+VSW +
Sbjct: 283 NLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTA 342
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++ YALHG EA LF M NV+P+ TF+++L+ACSHAGLV G K F+SM +
Sbjct: 343 MIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQY 402
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
G VP L+H A + D LGR G + EA I EM ++P S +WS LL +CR H T LAE
Sbjct: 403 GFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEV 462
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
A K+ +LEP V +SN+Y SG +N+A +RK M+ ++K P SWIE++N++H
Sbjct: 463 AKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHV 522
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F + K HP + I L Q+ GYVP L DIEEE K E L HSEKLA+V
Sbjct: 523 FIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIV 582
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
F I++ + IR+MKN+R+CVDCH K S ++ +EIVVRD NRFH FKD CS
Sbjct: 583 FGIIST----PPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCS 638
Query: 585 CNDYW 589
C D+W
Sbjct: 639 CGDFW 643
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 29/243 (11%)
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDW---CTFSIVLKACAGLVTERHASAVHSL 241
A I + A A+ LF Q+ R +AP + LK+CAGL A+++H+L
Sbjct: 16 AYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLHAL 74
Query: 242 IAKYGFEDDTVIANALI----------HAYARCG----------SISLSKQVFDKMTYHD 281
+ G D ANAL+ H + G + ++VFD+M D
Sbjct: 75 AIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERD 134
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
VSWN+++ A H + +EAL + M PD+ T ++L + ++ G V H
Sbjct: 135 AVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRG-MVVH 193
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+G + + ++D+ ++ + K+ + D+V+W+ +L ++G
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFS-DCDAVLWNSMLAGYAQNGSV 252
Query: 399 RLA 401
A
Sbjct: 253 EEA 255
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/592 (37%), Positives = 340/592 (57%), Gaps = 30/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C+ + Q+H ++ +++V++ LI+MYAK G LD A +F
Sbjct: 476 YPSILRTCSSLRAVDLGEQIHTQVLKT--GFQFNVYVSSVLIDMYAKLGKLDHALKIFRR 533
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
+ +++VVSWTA+I+GYAQH E LF + Q + AS + +C + G
Sbjct: 534 LKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQG 593
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA A + V NAL+++Y++ C +A+ F+ + ++ ISWNS+I+ F
Sbjct: 594 QQIHAQACVSGYSDDLSVGNALVSLYAR-CGKVRDAYFAFDKIFSKDNISWNSLISGF-- 650
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ + EEAL LF Q+ + G + TF + A A + + +H+
Sbjct: 651 -----------AQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHA 699
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+I K G + +T ++N LI YA+CG+I +++ F +M + +SWN++L Y+ HG +
Sbjct: 700 MIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFK 759
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL LF +M V P+ TFV +LSACSH GLV EG K F SM E HG+VP+ +HYAC+V
Sbjct: 760 ALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVV 819
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G + A + + EMP++PD+++ LL +C H + E AA+ L +LEP DS
Sbjct: 820 DLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSA 879
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SN+Y ++G + R+ MK V+K PG SWIE+ N VH F +G ++HP +
Sbjct: 880 TYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDK 939
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++ L +L GY+P+T+ L+D E K HSEKLA+ F +++ S
Sbjct: 940 IYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSS----S 995
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I + KN+R+C DCHN++K S + + IVVRDS RFHHFK ICSC DYW
Sbjct: 996 TPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 200/400 (50%), Gaps = 28/400 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I++++ AC K QLH ++ + +V N L+ +Y++ G A +F+
Sbjct: 273 IFSSVLSACTKVEFYKVGEQLHGLVLKQ--GFSLETYVCNALVTLYSRLGNFIPAEQVFN 330
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLH 121
M +R+ VS+ +LISG +Q G +++ LF + L P+ ++AS+L +C L
Sbjct: 331 AMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLV 390
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
GK H+ A+K + + + + AL+++Y K C+D A + F + E NV+ WN M+ A+
Sbjct: 391 GKQFHSYAIKAGMSSDIILEGALLDLYVK-CSDIKTAHEFFLSTETENVVLWNVMLVAY- 448
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ N E+ +F Q+Q EG+ P+ T+ +L+ C+ L +H
Sbjct: 449 ------------GLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH 496
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K GF+ + +++ LI YA+ G + + ++F ++ D+VSW +++ YA H +
Sbjct: 497 TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFA 556
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL LF M + D+ F S +SAC+ + +G ++ H+ G L +
Sbjct: 557 EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQI-HAQACVSGYSDDLSVGNAL 615
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
V L R G++ +A ++ D++ W+ L+ + G
Sbjct: 616 VSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISGFAQSG 654
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 192/397 (48%), Gaps = 29/397 (7%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
++Q Y L C G +LH ++ F E + + L+++Y FG LD A
Sbjct: 67 NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAE---VVLCERLMDLYIAFGDLDGAV 123
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCD--- 118
+FDEMP R + W ++ + A LF +LQ P+E + A VL C
Sbjct: 124 TVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGD 183
Query: 119 --YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMI 175
+ + +HA + + ++V N LI++Y K+ + A KVF+ ++ R+ +SW +M+
Sbjct: 184 VPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAML 243
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ ++ EEEA+ LF Q+ G+ P FS VL AC + +
Sbjct: 244 SGL-------------SQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG 290
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H L+ K GF +T + NAL+ Y+R G+ ++QVF+ M D VS+NS++ +
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQ 350
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G + +AL+LF M ++PD T SLLSACS G + G K FHS G+ +
Sbjct: 351 GYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVG-KQFHSYAIKAGMSSDIIL 409
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++DL + I A + E + V+W+V+L
Sbjct: 410 EGALLDLYVKCSDIKTAHEFFLSTETE-NVVLWNVML 445
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/587 (37%), Positives = 335/587 (57%), Gaps = 57/587 (9%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
FV LI+ Y+ G +D AR +FD + +++VSWT +++ +A++ +E +LF + +
Sbjct: 175 FVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMV 234
Query: 102 YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEA 156
F PN F+ ASV +C L GK VH ALK + +YV AL+++Y+KS D+A
Sbjct: 235 GFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDA 294
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+ FE + ++VI W+ MIA + +A+E+F +M+ +AL L P+
Sbjct: 295 RRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR---QALVL----------PNQ 341
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TF+ VL+ACA + + +H + K G D ++NAL+ YA+CG + S ++F +
Sbjct: 342 FTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAE 401
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---------------------------- 308
+ + V+WN+++ + G ++AL+LF NM
Sbjct: 402 SPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPG 461
Query: 309 ------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
V+PD TFV +LSAC++AGL+ +G F SM+++HG+ P ++HY CMV LLGR
Sbjct: 462 LQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGR 521
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G + +A KLI E+P +P ++W LLG+C H + L ++A ++ ++EP D V +
Sbjct: 522 GGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLL 581
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
SN+Y + ++ +RK MK V+K PGLSWIE + VH F G HP+ I L
Sbjct: 582 SNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGML 641
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
E L + K GY+P ++ L D+E+E KE L+ HSE+LAL F I+ S S IRI
Sbjct: 642 EWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPS----GSPIRI 697
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
MKN+RICVDCH +K S ++ +EIVVRD NRFHHF++ +CSC DYW
Sbjct: 698 MKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 182/361 (50%), Gaps = 27/361 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLF N L+NMY K +L DA LFDEMP+RN +S+ LI GYA+ E LF L
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 101 QYFFP-NEFSLASVL-----ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
+ N F ++L C L G +HA K +++ +V ALI+ YS C
Sbjct: 132 REGHELNPFVFTTILKLLVSTDCGEL-GWGIHACIFKLGHESNAFVGTALIDAYS-VCGR 189
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A +VF+ + +++++SW M+ F A+ +EAL LF Q++ G
Sbjct: 190 VDVAREVFDGILYKDMVSWTGMVTCF-------------AENDCFKEALKLFSQMRMVGF 236
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ TF+ V KAC GL +VH K +E D + AL+ Y + G I +++
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARR 296
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGL 329
F+++ D++ W+ ++ YA Q+KEA+++F M V P+ TF S+L AC+
Sbjct: 297 AFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEG 356
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ GN++ H + G+ + ++D+ + GR+ + +L E P D +V++
Sbjct: 357 LNLGNQI-HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIV 415
Query: 390 G 390
G
Sbjct: 416 G 416
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 164/334 (49%), Gaps = 34/334 (10%)
Query: 83 YAQHGNAEECFRLFCSLLQYFFPNEF---SLASVLISC----DYLHGKLVHALALKFSLD 135
+++ G + + +L + + P+EF + A+ L C + GK +H LK
Sbjct: 11 FSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGC 70
Query: 136 AHVYVANALINMYSKS---CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
++ N L+NMY KS C +A K+F+ M RN IS+ ++I + A+++
Sbjct: 71 LDLFAWNILLNMYVKSDFLC--DASKLFDEMPERNTISFVTLIQGY------AESVRFL- 121
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
EA+ LF +L REG + F+ +LK +H+ I K G E +
Sbjct: 122 ------EAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAF 175
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV-- 310
+ ALI AY+ CG + ++++VFD + Y D+VSW ++ +A + KEAL+LFS M +
Sbjct: 176 VGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVG 235
Query: 311 -QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRIL 367
+P++ TF S+ AC G V L++ +LD Y ++DL + G I
Sbjct: 236 FKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR---YELDLYVGVALLDLYTKSGDID 292
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+A + E+P + D + WS ++ + +++ A
Sbjct: 293 DARRAFEEIP-KKDVIPWSFMIARYAQSDQSKEA 325
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ ACA + Q+H H+I D+FV+N L+++YAK G ++++ LF E
Sbjct: 344 FASVLQACATMEGLNLGNQIHCHVIK--IGLHSDVFVSNALMDVYAKCGRMENSMELFAE 401
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HG 122
P RN V+W +I G+ Q G+ E+ RLF ++L+Y E + +S L +C L G
Sbjct: 402 SPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPG 461
Query: 123 KLVHALALKFSLDAHVYVANALIN 146
+H+L +K V V +A N
Sbjct: 462 LQIHSLTVKPDKLTFVGVLSACAN 485
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/590 (35%), Positives = 342/590 (57%), Gaps = 31/590 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA + ++H + +E + V+ ++++Y K G +D AR +FD M
Sbjct: 332 SVLPACADAQALGACREVHAFAVRGGFDE--QVNVSTAILDVYCKCGAVDSARKVFDGMQ 389
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HGKL 124
RN VSW A+I GYA++G+A E LF ++ + + S+ + L +C L G+
Sbjct: 390 DRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRR 449
Query: 125 VHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACK 182
VH L ++ L+++V V NALI MY K C D A +VF+ + ++ +SWN+MI
Sbjct: 450 VHELLVRIGLESNVNVMNALITMYCK-CKRTDLAAQVFDELGYKTRVSWNAMILGC---- 504
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ + E+A+ LF ++Q E + PD T ++ A A + A +H
Sbjct: 505 ---------TQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYS 555
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ + D + ALI YA+CG +S+++ +F+ +++WN+++ Y HG K A+
Sbjct: 556 IRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAV 615
Query: 303 QLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF M P+ TF+S+LSACSHAGLV EG + F SM E++G+ P ++HY MVDL
Sbjct: 616 ELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDL 675
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G++ EA I++MPMEP ++ +LG+C+ H LAE +A ++ +LEP + +
Sbjct: 676 LGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYH 735
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V ++NIY + + +R M+ ++K PG S ++++N +H F SG H Q + I+
Sbjct: 736 VLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIY 795
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+L +LI ++K +GYVP+T ++HD+E++ K + L HSEKLA+ + ++ +
Sbjct: 796 ARLAKLIEEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAP----GTT 850
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I+I KN+R+C DCHN KL S + G+EI++RD RFHHFKD CSC DYW
Sbjct: 851 IQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 200/410 (48%), Gaps = 35/410 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ + +L CA ++ +H + + P+ L T L NMYAK DAR +F
Sbjct: 226 RTFTSLLKLCAARADLATGRAVHAQLAARGLS-PEALAATA-LANMYAKCRRPGDARRVF 283
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYLHG- 122
D MP R+ V+W AL++GYA++G AE + + + P+ +L SVL +C
Sbjct: 284 DRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQAL 343
Query: 123 ---KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
+ VHA A++ D V V+ A++++Y K A D A KVF+ M+ RN +SWN+MI
Sbjct: 344 GACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKG- 402
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+A+ + EAL LF+++ EG+ + L AC L V
Sbjct: 403 ------------YAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRV 450
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H L+ + G E + + NALI Y +C L+ QVFD++ Y VSWN+++ +G +
Sbjct: 451 HELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSS 510
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH--- 352
++A++LFS M NV+PDS T VS++ A L + + + + + LD
Sbjct: 511 EDAVRLFSRMQLENVKPDSFTLVSIIPA-----LADISDPLQARWIHGYSIRLHLDQDVY 565
Query: 353 -YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
++D+ + GR+ A L + + W+ ++ HG ++A
Sbjct: 566 VLTALIDMYAKCGRVSIARSLFNSA-RDRHVITWNAMIHGYGSHGSGKVA 614
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 153/312 (49%), Gaps = 23/312 (7%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMI 175
D G+ VHA L A AL NMY+K C +A +VF+ M R+ ++WN+++
Sbjct: 240 DLATGRAVHAQLAARGLSPEALAATALANMYAK-CRRPGDARRVFDRMPARDRVAWNALV 298
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A + L A+ + +M+ E+ G PD T VL ACA
Sbjct: 299 AGYARNGLAEAAVGMVVRMQEED------------GERPDAVTLVSVLPACADAQALGAC 346
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VH+ + GF++ ++ A++ Y +CG++ +++VFD M + VSWN+++K YA +
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406
Query: 296 GQAKEALQLFSNMNVQPDSATFVSLLS---ACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G A EAL LF M + T VS+L+ AC G + EG +V H +L G+ ++
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRV-HELLVRIGLESNVNV 465
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE--LAATKLKQ 410
++ + + R A ++ E+ + V W+ ++ C ++G + A + +L+
Sbjct: 466 MNALITMYCKCKRTDLAAQVFDELGYK-TRVSWNAMILGCTQNGSSEDAVRLFSRMQLEN 524
Query: 411 LEPGDSLGFVQM 422
++P DS V +
Sbjct: 525 VKP-DSFTLVSI 535
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G P TF+ +LK CA AVH+ +A G + + A AL + YA+C +
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ----PDSATFVSLLSACSH 326
++VFD+M D V+WN+++ YA +G A+ A+ + M + PD+ T VS+L AC+
Sbjct: 280 RRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD 339
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
A + +V H+ G Q++ ++D+ + G + A K+ M + +SV W+
Sbjct: 340 AQALGACREV-HAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGM-QDRNSVSWN 397
Query: 387 VLLGSCRKHGE 397
++ ++G+
Sbjct: 398 AMIKGYAENGD 408
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/581 (37%), Positives = 328/581 (56%), Gaps = 39/581 (6%)
Query: 23 QAMQLHEHMINNFPNEPQDLFVTNHLINMYAK---FGYLDDARHLFDEMPKRNVVSWTAL 79
QA + H+ N DL + LIN + +D A LF+ +P+ ++V + ++
Sbjct: 46 QAFSIKTHLQN-------DLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSM 98
Query: 80 ISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSL 134
GY++ + LF L Y P++++ S+L +C + GK +H LA+K L
Sbjct: 99 FRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGL 158
Query: 135 DAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ + YV LINMY+ C D A +VF+ + V+S+N++I + A
Sbjct: 159 NENPYVCPTLINMYA-GCNDVDGAQRVFDEILEPCVVSYNAIITGY-------------A 204
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ EAL LFRQLQ + P+ T VL +CA L +H + K G +
Sbjct: 205 RSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVK 264
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ ALI YA+CGS+ + VF+ M+ D +W++++ AYA+HGQ ++ + +F M
Sbjct: 265 VNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAK 324
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
VQPD TF+ LL ACSH GLV EG + F+SM E +G++P + HY CMVDLLGR G + EA
Sbjct: 325 VQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEA 384
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
K I E+P++P ++W LL SC HG LA+ ++ +L+ +V +SN+ +
Sbjct: 385 YKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARA 444
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
G + +RK M K PG S IE++N VHEF SG H A+ + L+EL+ +L
Sbjct: 445 GKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKEL 504
Query: 490 KGMGYVPETSLALH-DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
K +GYVP+TSL +H D+E+E KE L +HSEKLA+ F ++N + IR++KN+R+
Sbjct: 505 KSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNT----PPGTTIRVVKNLRV 560
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH+ KL S L+ +EI++RD RFHHFKD CSC DYW
Sbjct: 561 CGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/539 (39%), Positives = 312/539 (57%), Gaps = 28/539 (5%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPN----EFSLASVLI 115
A +F ++ N+ +W +I GYA+ N L+ + + P+ F L ++
Sbjct: 93 AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152
Query: 116 SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNS 173
D G+ VH++A++ ++ V+V N L++MY+ +C A+ A K+FE M RN+++WNS
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYA-ACGHAESAHKLFELMAERNLVTWNS 211
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I + A EAL LFR++ G+ PD T +L ACA L
Sbjct: 212 VINGY-------------ALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALA 258
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
H + K G + + NAL+ YA+CGSI + +VFD+M +VSW S++ A
Sbjct: 259 LGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLA 318
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
++G KEAL+LF + + P TFV +L ACSH G+V EG F M E +G+VP++
Sbjct: 319 VNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKI 378
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HY CMVDLLGR G + +A + I+ MPM+P++V+W LLG+C HG L E+A +L Q
Sbjct: 379 EHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQ 438
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP S +V +SN+Y ++ +R+ M V+K PG S +E+ NR+HEF G +
Sbjct: 439 LEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDR 498
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HPQ E I+ KL E+ LK GYVP S L DIEEE KE L +HSEK+A+ F ++N
Sbjct: 499 SHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINT 558
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+R+C DCH +KL S + +EIVVRD +RFHHFKD CSC DYW
Sbjct: 559 AAGIP----IRVVKNLRVCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 152/301 (50%), Gaps = 25/301 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T Y L A A ++++ ++H I N +FV N L++MYA G+ + A L
Sbjct: 140 THTYPFLLKAIAKLMDVREGEKVHSIAIRN--GFESLVFVQNTLVHMYAACGHAESAHKL 197
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH-- 121
F+ M +RN+V+W ++I+GYA +G E LF + L+ P+ F++ S+L +C L
Sbjct: 198 FELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGAL 257
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
G+ H +K LD +++ NAL+++Y+K +A KVF+ ME ++V+SW S+I
Sbjct: 258 ALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGL 317
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
A+ F K EAL LF++L+R+G+ P TF VL AC+ G+V E
Sbjct: 318 --------AVNGFGK-----EALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGF-D 363
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALH 295
+ +YG ++ R G + + + M + V W ++L A +H
Sbjct: 364 YFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH 423
Query: 296 G 296
G
Sbjct: 424 G 424
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 39/228 (17%)
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSL 320
C +S + Q+F ++ ++ +WN++++ YA AL+L+ M+V +PD+ T+ L
Sbjct: 87 CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146
Query: 321 LSACSHAGLVQEGNKVFHSMLENHG------VVPQLDHY--AC----------------- 355
L A + V+EG KV HS+ +G V L H AC
Sbjct: 147 LKAIAKLMDVREGEKV-HSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERN 205
Query: 356 ------MVDLLGRVGRILEAEKLIREMPM---EPDSVIWSVLLGSCRKHGETRLAELAAT 406
+++ GR EA L REM + EPD LL +C + G L A
Sbjct: 206 LVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHV 265
Query: 407 KLKQLE-PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
+ ++ G+ + ++Y GS +A + EM+ V + L
Sbjct: 266 YMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSL 313
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 315/559 (56%), Gaps = 29/559 (5%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V N L+ MY K G + +A+ + MP+ + V+W ALI G+A++ E + + + +
Sbjct: 1184 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243
Query: 102 YFFP-NEFSLASVLISC----DYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
P N ++ SVL +C D L HG +HA + ++ YV N+LI MY+K C D
Sbjct: 1244 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK-CGDL 1302
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ +F+ + ++ I+WN+M+AA A EEAL +F +++ G+
Sbjct: 1303 NSSNYIFDGLGNKSPITWNAMVAAN-------------AHHGCGEEALKIFGEMRNVGVN 1349
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D +FS L A A L +H L+ K GFE D + NA + Y +CG + ++
Sbjct: 1350 LDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 1409
Query: 274 FDKMTYHDLVSWNSILKAYALHG---QAKEALQLFSNMNVQPDSATFVSLLSACSHAGLV 330
+ +SWN ++ A+A HG +A+E + +PD TFVSLLSAC+H GLV
Sbjct: 1410 LPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLV 1469
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG + SM GV P ++H C++DLLGR GR+ AE I+EMP+ P+ + W LL
Sbjct: 1470 DEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLA 1529
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR HG LA A L +L+P D +V SN+ SG + +RKEM + ++K
Sbjct: 1530 ACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQ 1589
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
P SW++++++VH F G K HPQ I KL EL+ K GYVP+TS ALHD++EE K
Sbjct: 1590 PACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQK 1649
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E L++HSE+LAL F ++N E S +RI KN+R+C DCH+ K S ++G++IV+R
Sbjct: 1650 EYNLWNHSERLALAFGLINT----PESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLR 1705
Query: 571 DSNRFHHFKDRICSCNDYW 589
D RFHHF CSC DYW
Sbjct: 1706 DPYRFHHFSGGKCSCGDYW 1724
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 237/431 (54%), Gaps = 21/431 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++LFV + L++ ++K G ++DA +LF M +R+VVSW A+I GYA G A++ F +F S+
Sbjct: 164 ENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSM 223
Query: 100 LQY-FFPNEFSLASVLISCDYLHGKLV----HALALKFSLDAHVYVANALINMYSKSCAD 154
L+ P+ ++L SVL + G ++ H + + ++ V LIN Y+K+ +
Sbjct: 224 LRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSL 283
Query: 155 EAWK-VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ K + + M +++ S ++I + + + +AL LF+++ + +
Sbjct: 284 RSAKDLRKGMLKKDLFSSTALITGYAHEGIYSV------------DALDLFKEMNQMNIG 331
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D +L CA L + + +H+ KY D + NALI YA+ G I +K+
Sbjct: 332 MDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRA 391
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD+M +++SW S++ YA HG A+ L+ M +P+ TF+SLL ACSH GL
Sbjct: 392 FDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLT 451
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG + F++M+ + + P+ +HY+CMVDL R G + EA L+ ++ ++ ++ +W +LG
Sbjct: 452 AEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILG 511
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+ +G L + AA+ L ++P +S+ +V +++IY +G ++ A IRK M+ +K
Sbjct: 512 ASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKN 571
Query: 451 PGLSWIEIENR 461
G S+ + +
Sbjct: 572 AGYSFFQATKK 582
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 211/425 (49%), Gaps = 37/425 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+Y + C KQ +H H+I N DL + LI Y K G + AR++FD
Sbjct: 32 LYLKILQLCIDKKAKKQGHLIHTHLITN--GFGSDLHLNTKLIIFYVKVGDVIAARNVFD 89
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH---- 121
MP+R+VVSWTA++SGY+Q+G E+ F LF + N+F+ S L +C L
Sbjct: 90 GMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDM 149
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFR 179
G V K +++V +AL++ +SK C ++A +F M R+V+SWN+MI +
Sbjct: 150 GIQVQGCIQKGRFVENLFVKSALVDFHSK-CGKMEDASYLFGTMMERDVVSWNAMIGGY- 207
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA---GLVTERHAS 236
A++ FA +++ +FR + R G+ PD T VL+A A GL+ A+
Sbjct: 208 -------AVQGFA-----DDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLII---AN 252
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H +I + G+ ++ LI+AYA+ GS+ +K + M DL S +++ YA G
Sbjct: 253 QIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEG 312
Query: 297 -QAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
+ +AL LF + MN+ D S+L+ C++ G ++ H+ + +
Sbjct: 313 IYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQI-HAFALKYQPSYDVAM 371
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL--KQ 410
++D+ + G I +A++ EM E + + W+ L+ KHG +A K+ K
Sbjct: 372 GNALIDMYAKSGEIEDAKRAFDEME-EKNVISWTSLISGYAKHGYGHMAVSLYKKMESKG 430
Query: 411 LEPGD 415
+P D
Sbjct: 431 FKPND 435
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 196/372 (52%), Gaps = 37/372 (9%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
+F TN LINMY+KFG ++ AR++FDEM RN SW+ ++SGY + G EE LFC +
Sbjct: 779 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 838
Query: 102 YFF-PNEFSLASVLISCD---YL--HGKLVHALALKFSLDAHVYVANALINMY-SKSCAD 154
PN F +AS++ +C Y+ G VH +K + VYV AL++ Y S
Sbjct: 839 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 898
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A K+FE M NV+SW S++ + + N E L +++++++EG++
Sbjct: 899 NAQKLFEEMPDHNVVSWTSLMVGY-------------SDSGNPGEVLNVYQRMRQEGVSG 945
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ TF+ V +C L + V I +YGFED +AN+LI ++ S+ + VF
Sbjct: 946 NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVF 1005
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQ 331
D M D++SWN+++ AYA HG +E+L+ F +++ + +S T SLLS CS ++
Sbjct: 1006 DHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLK 1065
Query: 332 EGNKVFHSMLENHGVVPQ--LDHYAC----MVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + HG+V + LD C ++ L GR +AE + + M E D + W
Sbjct: 1066 WGRGI-------HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISW 1117
Query: 386 SVLLGSCRKHGE 397
+ ++ + G+
Sbjct: 1118 NSMMACYVQDGK 1129
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 218/430 (50%), Gaps = 31/430 (7%)
Query: 7 IYATLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ A+L AC+ G + + Q+H ++ D++V L++ Y G + +A+ LF
Sbjct: 847 MVASLITACSRSGYMADEGFQVHGFVVKT--GILGDVYVGTALVHFYGSIGLVYNAQKLF 904
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYL 120
+EMP NVVSWT+L+ GY+ GN E ++ + Q N+ + A+V SC D +
Sbjct: 905 EEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQV 964
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G V +++ + V VAN+LI+M+S S +EA VF++M ++ISWN+MI+A+
Sbjct: 965 LGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYA 1024
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L +++ F M R L E + T S +L C+ + + +H
Sbjct: 1025 HHGLCRESLRCFHWM----------RHLHNE---TNSTTLSSLLSVCSSVDNLKWGRGIH 1071
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
L+ K G + + I N L+ Y+ G ++ VF MT DL+SWNS++ Y G+
Sbjct: 1072 GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCL 1131
Query: 300 EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+ L++ + M + TF S L+ACS+ + E +K+ H+++ G L +
Sbjct: 1132 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIE-SKIVHALIIVAGFHDFLIVGNAL 1190
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL-EPGD 415
V + G++G ++EA+K+++ MP +PD V W+ L+G H E A K + E G
Sbjct: 1191 VTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG---HAENEEPNEAVKAYKLIREKGI 1246
Query: 416 SLGFVQMSNI 425
++ M ++
Sbjct: 1247 PANYITMVSV 1256
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 169/330 (51%), Gaps = 30/330 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+AT+ +C L + Q+ H+I F + + V N LI+M++ F +++A ++FD
Sbjct: 950 FATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS---VSVANSLISMFSSFSSVEEACYVFD 1006
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC------DYL 120
M + +++SW A+IS YA HG E R F + NE + ++ D L
Sbjct: 1007 HMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH--LHNETNSTTLSSLLSVCSSVDNL 1064
Query: 121 H-GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H L +K LD++V + N L+ +YS++ +++A VF+ M R++ISWNSM+A +
Sbjct: 1065 KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACY 1124
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ + ++ L + +L + G + TF+ L AC+ + V
Sbjct: 1125 VQ---DGKCLD----------GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIV 1171
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+LI GF D ++ NAL+ Y + G + +K+V M D V+WN+++ +A + +
Sbjct: 1172 HALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEP 1231
Query: 299 KEAL---QLFSNMNVQPDSATFVSLLSACS 325
EA+ +L + + T VS+L ACS
Sbjct: 1232 NEAVKAYKLIREKGIPANYITMVSVLGACS 1261
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 33/322 (10%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
+K M +H H++ D +V N LI MYAK G L+ + ++FD + ++ ++W A++
Sbjct: 1267 LKHGMPIHAHIV--LTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMV 1324
Query: 81 SGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYL----HGKLVHALALKFSLD 135
+ A HG EE ++F + ++FS + L + L G+ +H L +K +
Sbjct: 1325 AANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFE 1384
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+ ++V NA ++MY K C + + K+ R+ +SWN +I+A FA+
Sbjct: 1385 SDLHVTNAAMDMYGK-CGEMHDVLKMLPQPINRSRLSWNILISA-------------FAR 1430
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDT 251
++A F ++ + G PD TF +L AC GLV E A S+ ++G
Sbjct: 1431 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA-YYDSMTREFGVFPGI 1489
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYALHGQ---AKEALQLFS 306
+I R G +S ++ +M +DL +W S+L A +HG A++ +
Sbjct: 1490 EHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDL-AWRSLLAACRIHGNLELARKTAEHLL 1548
Query: 307 NMNVQPDSATFVSLLSACSHAG 328
++ DSA +V + C+ +G
Sbjct: 1549 ELDPSDDSA-YVLYSNVCATSG 1569
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 139/289 (48%), Gaps = 28/289 (9%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ GK +HA + S++ ++ N LINMYSK + A VF+ M RN SW++M++ +
Sbjct: 761 MAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 820
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHAS 236
L EEA+ LF Q+ G+ P+ + ++ AC +G + +
Sbjct: 821 VRVGL-------------YEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE-GF 866
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH + K G D + AL+H Y G + ++++F++M H++VSW S++ Y+ G
Sbjct: 867 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE---GNKVFHSMLENHGVVPQL 350
E L ++ M V + TF ++ S+C GL+++ G +V +++ +G +
Sbjct: 927 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQ-YGFEDSV 982
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
++ + + EA + M E D + W+ ++ + HG R
Sbjct: 983 SVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHHGLCR 1030
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/581 (37%), Positives = 321/581 (55%), Gaps = 46/581 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ GNI ++H LFV N L++MY K G+L +AR + DE
Sbjct: 144 FPCVLKACSCSGNIVIGKKIHGSATK--VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE 201
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
M +R+VVSW +L++GYAQ+ ++ + C ++ K+ H
Sbjct: 202 MSRRDVVSWNSLVAGYAQNQRFDDALEV-CREMESV-------------------KISHD 241
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
SL V MY K +F M ++++SWN MI + + +A
Sbjct: 242 AGTMASLLPAVSNTTTENVMYVKD-------MFFKMGKKSLVSWNVMIGVYMKNAMPVEA 294
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+EL++ M + +G PD + + VL AC +H I +
Sbjct: 295 VELYSGM-------------EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL 341
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ ++ NALI YA+CG + ++ VF+ M D+VSW +++ AY G+ +A+ LFS
Sbjct: 342 IPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 401
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M + PDS FV+ L+ACSHAGL++EG F M +++ + P+L+H ACMVDLLGR G
Sbjct: 402 MQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 461
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
++ EA K I+EMPMEP+ +W LLG+CR H T + LAA KL QL P S +V +SN
Sbjct: 462 KVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSN 521
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
IY +G + + IR MK ++K PG S +E+ +H F G + HPQ I+++L+
Sbjct: 522 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDV 581
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
L+ ++K +GYVP++ ALHD+EEE KE L HSEKLA+VFA+MN + IRI K
Sbjct: 582 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEE-DSNNAIRITK 640
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
N+RIC DCH KL S + +EI++RD+NRFH F+ +CSC
Sbjct: 641 NLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 681
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VHS I ++ + L+ AYA ++ +++VFD++ +++ N ++++Y +G
Sbjct: 61 TVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNG 120
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+E +Q+F M +V+PD TF +L ACS +G + G K+ H G+ L
Sbjct: 121 FYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKI-HGSATKVGLSSTLFVG 179
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+V + G+ G + EA ++ EM D V W+ L+
Sbjct: 180 NGLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLVA 215
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/586 (36%), Positives = 333/586 (56%), Gaps = 29/586 (4%)
Query: 16 ALHGNIKQAMQLHEHMIN--NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
A HG + Q +H + + + + + V L++MYAK G+L A +F+ M RN
Sbjct: 240 AQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNE 299
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISC----DYLHGKLVHA 127
V+W+AL+ G+ G E F LF +L F + S+AS L +C D GK +HA
Sbjct: 300 VTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHA 359
Query: 128 LALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
L K L + N+L++MY+K+ D+A +F+ M ++ +S++++++ +
Sbjct: 360 LLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGY-------- 411
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
+ +EA +FR++Q + PD T ++ AC+ L +H H + G
Sbjct: 412 -----VQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRG 466
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
+T I NALI YA+CG I LS+Q+FD M D+VSWN+++ Y +HG KEA LF
Sbjct: 467 IASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFL 526
Query: 307 NMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
+M Q PD TF+ L+SACSH+GLV EG + FH M +G+ P+++HY MVDLL R
Sbjct: 527 DMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARG 586
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
G + EA + I+ MP++ D +W LLG+CR H L + ++ ++QL P + FV +S
Sbjct: 587 GFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLS 646
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
NI+ +G F++A +R K +K PG SWIEI +H F G + H Q I+++L+
Sbjct: 647 NIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELD 706
Query: 484 ELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIM 543
++ + +GY +TS L D+EEE KE+ L +HSEKLA+ F ++ E I +
Sbjct: 707 NILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLT----LSEDKTIFVT 762
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+R+C DCH +K + + + I+VRD+NRFHHFK+ CSC D+W
Sbjct: 763 KNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 204/423 (48%), Gaps = 32/423 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ +++ A +H H DLFV+ L+++YAK A +F
Sbjct: 132 FPFVLKACSALLDLRSARAVHCHAAR--AGLHADLFVSTALVDVYAKCASFRHAATVFRR 189
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLI----SCDYLHGK 123
MP R+VV+W A+++GYA HG + + PN +L ++L G+
Sbjct: 190 MPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGR 249
Query: 124 LVHALALKF-SLDAH---VYVANALINMYSKSCADEAW--KVFENMEFRNVISWNSMIAA 177
VHA +++ SL H V V AL++MY+K C + +VFE M RN ++W++++
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAK-CGHLVYASRVFEAMAVRNEVTWSALVGG 308
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F C +A LF M + ++P + + L+ACA L
Sbjct: 309 FVLCGRMLEAFSLFKDMLAQGLCF----------LSPT--SVASALRACANLSDLCLGKQ 356
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+L+AK G D N+L+ YA+ G I + +FD+M D VS+++++ Y +G+
Sbjct: 357 LHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGK 416
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A EA ++F M NVQPD AT VSL+ ACSH +Q G K H + G+ +
Sbjct: 417 ADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHG-KCGHGSVIVRGIASETSICN 475
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LE 412
++D+ + GRI + ++ MP D V W+ ++ HG + A +K E
Sbjct: 476 ALIDMYAKCGRIDLSRQIFDVMPAR-DIVSWNTMIAGYGIHGLGKEATALFLDMKHQACE 534
Query: 413 PGD 415
P D
Sbjct: 535 PDD 537
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 166/358 (46%), Gaps = 32/358 (8%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVL 114
G L ARHLFD++P + + ALI Y+ G A + PN ++ VL
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 115 ISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNV 168
+C D + VH A + L A ++V+ AL+++Y+K CA A VF M R+V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAK-CASFRHAATVFRRMPARDV 195
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
++WN+M+A + L K + L L ++ AP+ T +L A
Sbjct: 196 VAWNAMLAGY----------ALHGKYSDTIACLLLM----QDDHAPNASTLVALLPLLAQ 241
Query: 229 LVTERHASAVHSLIAK----YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
AVH+ + + +D ++ AL+ YA+CG + + +VF+ M + V+
Sbjct: 242 HGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT 301
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQP----DSATFVSLLSACSHAGLVQEGNKVFHSM 340
W++++ + L G+ EA LF +M Q + S L AC++ + G K H++
Sbjct: 302 WSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLG-KQLHAL 360
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
L G+ L ++ + + G I +A L +M ++ D+V +S L+ ++G+
Sbjct: 361 LAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVK-DTVSYSALVSGYVQNGKA 417
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSL 320
CG +SL++ +FD++ + +N++++AY+L G A S QP++ TF +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
L ACS A L + H G+ L +VD+ + A + R MP
Sbjct: 136 LKACS-ALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR- 193
Query: 381 DSVIWSVLLGSCRKHGE 397
D V W+ +L HG+
Sbjct: 194 DVVAWNAMLAGYALHGK 210
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/568 (38%), Positives = 335/568 (58%), Gaps = 31/568 (5%)
Query: 35 FPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F P +D+ LI YA GY+++A+ LFDE+P ++VVSW A+ISGYA+ GN +E
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 94 RLFCSLLQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMY 148
LF +++ P+E ++ +V+ +C G+ VH +++ + NALI++Y
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 149 SKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
SK C + A +FE + +++VISWN++I + M +EAL LF++
Sbjct: 312 SK-CGELETACGLFERLPYKDVISWNTLIGGY-------------THMNLYKEALLLFQE 357
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARC 264
+ R G P+ T +L ACA L +H I K G + + + +LI YA+C
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
G I + QVF+ + + L SWN+++ +A+HG+A + LFS M +QPD TFV LL
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
SACSH+G++ G +F +M +++ + P+L+HY CM+DLLG G EAE++I M MEPD
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 537
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
VIW LL +C+ HG L E A L ++EP + +V +SNIY +G +N+ R
Sbjct: 538 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 597
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
+ ++K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS
Sbjct: 598 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
L ++EEE KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S
Sbjct: 658 LQEMEEEWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLISK 713
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +EI+ RD RFHHF+D +CSCNDYW
Sbjct: 714 IYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 194/419 (46%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F + + N++ W + G+A + +L+ C + PN ++ V
Sbjct: 81 FEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 140
Query: 114 LISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D +YV +LI+MY ++ ++A KVF+ R+V
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 169 ISWNSMIAAFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQRE 210
+S+ ++I + + A +LF A+ N +EAL LF+ + +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ ACA + VH I +GF + I NALI Y++CG + +
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F+++ Y D++SWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ GV ++D+ + G I A ++ + + W
Sbjct: 381 GAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSW 438
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG + +++++ ++P D + FV + + SG + R I + M
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQP-DDITFVGLLSACSHSGMLDLGRHIFRTM 496
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 112 SVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE----AWKVFENMEFR 166
S+L +C L +++HA +K L Y + LI S E A VF+ ++
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
N++ WN+M FR L + + AL L+ + G+ P+ TF VLK+C
Sbjct: 98 NLLIWNTM---FRGHALSSDPVS----------ALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 227 AGLVTERHASAVHSLIAKYG--------------------FED-----------DTVIAN 255
A + +H + K G ED D V
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI YA G I ++++FD++ D+VSWN+++ YA G KEAL+LF +M NV+P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D +T V+++SAC+ +G ++ G +V H +++HG L ++DL + G + A L
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 373 IREMPMEPDSVIWSVLLGS 391
+P + D + W+ L+G
Sbjct: 324 FERLPYK-DVISWNTLIGG 341
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G I +H ++ + LI+MYAK G ++ A +F+ +
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
+++ SW A+I G+A HG A+ F LF + + P++ + +L +C +
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/532 (40%), Positives = 317/532 (59%), Gaps = 29/532 (5%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVL----ISCDYLHG 122
M R++ SWT+LI+GYAQ+ +E L +L+ F PN F+ AS+L S G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HAL +K+ VYV +AL++MY++ C D A VF+ +E +N +SWN++IA F
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYAR-CGRMDMAIAVFDQLESKNGVSWNALIAGF-- 117
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ + E L +F ++QR G T+S V A AG+ VH+
Sbjct: 118 -----------ARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 166
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G + N ++ YA+ GS+ +++VFD + DLV+WNS+L A+A +G +E
Sbjct: 167 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGRE 226
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ F M V + TF+S+L+ACSH GLV+EG + F M++ H + P++DHY +V
Sbjct: 227 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYF-DMMKEHNLEPEIDHYVTVV 285
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G + +A I +MPM+P + +W LLGSCR H ++ + AA + +L+P D+
Sbjct: 286 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTG 345
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
V + NIY +G ++ A +RK MK + V+K P SW+EIEN VH F + HP+ E
Sbjct: 346 PPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEE 405
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+KK EE+ Q++ GYVP T L ++E+ ++ +L +HSEK+AL FA++N
Sbjct: 406 IYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINM----PLG 461
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRIMKNIRIC DCH+ + S + +EIVVRD+NRFHHF CSC DYW
Sbjct: 462 ATIRIMKNIRICGDCHSAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 64/329 (19%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+L A + Q+H + + D++V + L++MYA+ G +D A +FD+
Sbjct: 44 FASLLKAAGASASSGIGEQIHALTVKY--DWHDDVYVGSALLDMYARCGRMDMAIAVFDQ 101
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HG 122
+ +N VSW ALI+G+A+ G+ E +F + + F F+ +SV + + G
Sbjct: 102 LESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG 161
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
K VHA +K +V N +++MY+KS + +A KVF++++ +++++WNSM+ A
Sbjct: 162 KWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTA---- 217
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVH 239
FA+ EA+ F ++++ G+ + TF +L AC+ GLV E
Sbjct: 218 ---------FAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKE------- 261
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS----WNSILKAYALH 295
KQ FD M H+L + +++
Sbjct: 262 ------------------------------GKQYFDMMKEHNLEPEIDHYVTVVDLLGRA 291
Query: 296 GQAKEALQLFSNMNVQPDSATFVSLLSAC 324
G +AL M ++P +A + +LL +C
Sbjct: 292 GLLNDALVFIFKMPMKPTAAVWGALLGSC 320
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/592 (35%), Positives = 340/592 (57%), Gaps = 30/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G+++ Q+H +I + + +V + LI+MYAK G LD A +
Sbjct: 476 YPSILKTCIRLGDLELGEQIHSQIIKT--SFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 533
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
++VVSWT +I+GY Q+ ++ F +L +E L + + +C L G
Sbjct: 534 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 593
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA A + + NAL+ +YSK C +EA+ FE E + I+WN++++ F+
Sbjct: 594 QQIHAQACVSGFSSDLPFQNALVTLYSK-CGNIEEAYLAFEQTEAGDNIAWNALVSGFQ- 651
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ N EEAL +F ++ REG+ + TF +KA + + VH+
Sbjct: 652 ------------QSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHA 699
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+I K G++ +T + NA+I YA+CGSIS +K+ F +++ + VSWN+++ AY+ HG E
Sbjct: 700 VITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSE 759
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL F M NV+P+ T V +LSACSH GLV +G + F SM +G+ P+ +HY C+V
Sbjct: 760 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVV 819
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+L R G + A+ I EMP+EPD+++W LL +C H + E AA L +LEP DS
Sbjct: 820 DMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA 879
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SN+Y + ++ L R++MK V+K PG SWIE++N +H F G + HP +
Sbjct: 880 TYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADE 939
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I + ++L + +GYV + L ++++E K+ ++ HSEKLA+ F +++ +
Sbjct: 940 IHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMP-- 997
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I +MKN+R+C DCH+++K S + +EI+VRD+ RFHHF+ CSC DYW
Sbjct: 998 --INVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 196/397 (49%), Gaps = 33/397 (8%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
Q+H +I + + V N LI++Y++ G++D AR +FD + ++ SW A+ISG ++
Sbjct: 191 QIHARII--YQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSK 248
Query: 86 HGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYV 140
+ E RLFC + + P ++ +SVL +C + G+ +H L LK + YV
Sbjct: 249 NECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 308
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
NAL+++Y A +F NM R+ +++N++I C +A+ELF +M
Sbjct: 309 CNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM----- 363
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
Q +G+ PD T + ++ AC+ T +H+ K GF + I AL++
Sbjct: 364 --------QLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLN 415
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSAT 316
YA+C I + F + ++V WN +L AY L + + ++F M ++ P+ T
Sbjct: 416 LYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 475
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIR 374
+ S+L C G ++ G ++ +++ QL+ Y C ++D+ ++G++ A ++
Sbjct: 476 YPSILKTCIRLGDLELGEQIHSQIIKTS---FQLNAYVCSVLIDMYAKLGKLDTAWDILI 532
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
+ D V W+ ++ + + + A T +Q+
Sbjct: 533 RFAGK-DVVSWTTMIAG---YTQYNFDDKALTTFRQM 565
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 191/405 (47%), Gaps = 30/405 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++++ AC +++ QLH ++ F + D +V N L+++Y G L A H+F
Sbjct: 274 FSSVLSACKKIESLEIGEQLHGLVLKLGFSS---DTYVCNALVSLYFHLGSLISAEHIFS 330
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLH 121
M +R+ V++ LI+G +Q G E+ LF + L P+ +LAS++++C
Sbjct: 331 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +HA K ++ + AL+N+Y+K C+D A F E NV+ WN M+ A+
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAK-CSDIETALNYFLETEVENVVLWNVMLVAYG 449
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L ++N + +FRQ+Q E + P+ T+ +LK C L +H
Sbjct: 450 ----------LLDDLRN---SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 496
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S I K F+ + + + LI YA+ G + + + + D+VSW +++ Y +
Sbjct: 497 SQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 556
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL F M ++ D + +SAC+ ++EG ++ H+ G L +
Sbjct: 557 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNAL 615
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V L + G I EA L E D++ W+ L+ ++ G A
Sbjct: 616 VTLYSKCGNIEEA-YLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 659
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 190/396 (47%), Gaps = 30/396 (7%)
Query: 6 QIYATLFHAC-ALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
Q L C +G++ + +LH ++ F N + ++ L++ Y G LD A
Sbjct: 68 QTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDN---NACLSEKLLDFYLFKGDLDGALK 124
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD---- 118
+FDEMP+R + +W +I A + + F LF ++ + PNE + + VL +C
Sbjct: 125 VFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSV 184
Query: 119 -YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIA 176
+ + +HA + L V N LI++YS++ D A +VF+ + ++ SW +MI+
Sbjct: 185 AFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMIS 244
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ E +AI LF M ++ G+ P FS VL AC + +
Sbjct: 245 GLSKNECEVEAIRLFCDM-------YVL------GIMPTPYAFSSVLSACKKIESLEIGE 291
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H L+ K GF DT + NAL+ Y GS+ ++ +F M+ D V++N+++ + G
Sbjct: 292 QLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCG 351
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
++A++LF M ++PDS T SL+ ACS G + G ++ H+ G
Sbjct: 352 YGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQL-HAYTTKLGFASNDKIE 410
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+++L + I A E +E + V+W+V+L
Sbjct: 411 GALLNLYAKCSDIETALNYFLETEVE-NVVLWNVML 445
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/595 (37%), Positives = 350/595 (58%), Gaps = 30/595 (5%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
H+T +A++ +CA + LH + + + Q++ L+ K +DDA
Sbjct: 304 HAT--FASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTA--LMVALTKCKEIDDAF 359
Query: 63 HLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDY 119
LF M ++VVSWTA+ISGY Q+G+ ++ LF SL++ PN F+ +++L
Sbjct: 360 SLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLF-SLMRREGVKPNHFTYSTILTVQHA 418
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ +HA +K + + V AL++ + K +A KVFE +E ++VI+W++M+A +
Sbjct: 419 VFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGY 478
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC-AGLVTERHASA 237
AQA E EEA +F QL REG+ P+ TF ++ AC A +
Sbjct: 479 ------AQAGE-------TEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQ 525
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H+ K + ++++L+ YA+ G+I + ++F + DLVSWNS++ YA HGQ
Sbjct: 526 FHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQ 585
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
AK+AL++F M N++ D+ TF+ ++SAC+HAGLV +G F+ M+ +H + P ++HY+
Sbjct: 586 AKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYS 645
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CM+DL R G + +A +I MP P + +W ++L + R H L +LAA K+ LEP
Sbjct: 646 CMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQ 705
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
S +V +SNIY +G++++ +RK M RV+K PG SWIE++N+ + F +G HP
Sbjct: 706 HSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPL 765
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I+ KL EL +L+ +GY P+T+ HDIE+E KE L HHSE+LA+ F ++
Sbjct: 766 SDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLI----AT 821
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++I+KN+R+C DCH+F+KL S + + IVVRDSNRFHHFK +CSC DYW
Sbjct: 822 LPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 190/381 (49%), Gaps = 34/381 (8%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-L 100
L V N L++MY K G + D R +FDEM R+VVSW +L++GY+ + ++ + LFC + +
Sbjct: 137 LSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQV 196
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADE 155
+ + P+ +++++V+ + G +HAL +K + V N+LI+M SKS +
Sbjct: 197 EGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRD 256
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A VF+NME ++ +SWNSMIA + Q +E F F +Q G P
Sbjct: 257 ARVVFDNMENKDSVSWNSMIAGH---VINGQDLEAFET----------FNNMQLAGAKPT 303
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
TF+ V+K+CA L +H K G + + AL+ A +C I + +F
Sbjct: 304 HATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFS 363
Query: 276 KM-TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
M +VSW +++ Y +G +A+ LFS M V+P+ T+ ++L+ HA +
Sbjct: 364 LMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV-QHAVFIS 422
Query: 332 EGN-KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
E + +V + E V ++D ++G I +A K+ E+ D + WS +L
Sbjct: 423 EIHAEVIKTNYEKSSSVG-----TALLDAFVKIGNISDAVKVF-ELIETKDVIAWSAMLA 476
Query: 391 SCRKHGETRLAELAATKLKQL 411
+ GET E AA QL
Sbjct: 477 GYAQAGET---EEAAKIFHQL 494
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 174/353 (49%), Gaps = 29/353 (8%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC-- 117
A+ LFD+ P R++ L+ Y++ +E LF SL + P+ ++++ VL C
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSM 174
+ G+ VH +K L H+ V N+L++MY+K+ + +VF+ M R+V+SWNS+
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ + + Q ELF M Q EG PD+ T S V+ A A
Sbjct: 175 LTGYSWNRFNDQVWELFCLM-------------QVEGYRPDYYTVSTVIAALANQGAVAI 221
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+L+ K GFE + ++ N+LI ++ G + ++ VFD M D VSWNS++ + +
Sbjct: 222 GMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVI 281
Query: 295 HGQAKEALQLFSNMNV---QPDSATFVSLLSACS---HAGLVQEGNKVFHSMLENHGVVP 348
+GQ EA + F+NM + +P ATF S++ +C+ GLV +V H G+
Sbjct: 282 NGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV----RVLHCKTLKSGLST 337
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ ++ L + I +A L M V W+ ++ ++G+T A
Sbjct: 338 NQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQA 390
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 332/579 (57%), Gaps = 35/579 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D F+ LI MYA + DAR LFD+M + V+W +I GY Q+G+ ++ RLF +
Sbjct: 154 DDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDM 213
Query: 100 LQY-FFPNEFSLASVLISCDYL----HGKLVHALALK--FSLDAHVYVANALINMYSKSC 152
P+ L +VL +C + +G+ +H +++D+H+ ALINMY+
Sbjct: 214 RSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHL--QTALINMYANCG 271
Query: 153 A-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA------------------IELFAK 193
A D A K+++ + +++I +M++ + + A I +A+
Sbjct: 272 AMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAE 331
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+EAL LF ++ ++ PD T V+ AC+ + A+ +H+ + + GF +
Sbjct: 332 SDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSV 391
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
NALI YA+CG++ +++VF+ M +++SW+S++ A+A+HG A A++LF M N+
Sbjct: 392 NNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNI 451
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+P+ TF+ +L AC HAGLV+EG K+F SM+ HG+ P +HY CMVDL R + +A
Sbjct: 452 EPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAI 511
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+LI MP P+ +IW L+ +C+ HGE L E AA +L +LEP V +SNIY
Sbjct: 512 ELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEK 571
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+N LIRK M + K S IEI N+VH F + H Q + I++KL+E++ +LK
Sbjct: 572 RWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLK 631
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
+GY P TS L D+EEE K+E + HSEKLA+ + ++++ R S IRI+KN+RIC
Sbjct: 632 LVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISR----RNESCIRIVKNLRICE 687
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH+FMKL S + EIVVRD RFHH ICSC DYW
Sbjct: 688 DCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 163/332 (49%), Gaps = 54/332 (16%)
Query: 7 IYATLFHACALHGNIKQAMQLHEH---------------MINNFPN-------------- 37
I T+ AC GN+ +HE +IN + N
Sbjct: 224 ILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGL 283
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
+ L V+ +++ YAK G + DAR +FD+M +R++V W+A+ISGYA+ +E +LF
Sbjct: 284 SSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFD 343
Query: 98 SLLQ-YFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+LQ P++ ++ SV+ +C ++ +H + + V NALI+MY+K C
Sbjct: 344 EMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAK-C 402
Query: 153 AD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ +A +VFENM +NVISW+SMI A FA N + A+ LFR+++
Sbjct: 403 GNLVKAREVFENMPRKNVISWSSMINA-------------FAMHGNADSAIKLFRRMKEV 449
Query: 211 GMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ P+ TF VL AC AGLV E S+I ++G ++ Y R +
Sbjct: 450 NIEPNGVTFIGVLYACGHAGLV-EEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLR 508
Query: 269 LSKQVFDKMTY-HDLVSWNSILKAYALHGQAK 299
+ ++ + M + +++ W S++ A +HG+A+
Sbjct: 509 KAIELIETMPFAPNVIIWGSLMSACQVHGEAE 540
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 175/394 (44%), Gaps = 60/394 (15%)
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNEFSLASVLISCD--- 118
+F ++P + L+ ++ E+ L+ +L + F + FS S+L +
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 119 -YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
+ HG +H LA K ++ LI MY+ SC +A +F+ M + ++WN +I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYA-SCRRIMDARLLFDKMCHPDAVAWNMII 194
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ + + ++AL LF ++ M PD VL AC +
Sbjct: 195 DG-------------YCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYG 241
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ----------------------- 272
+H + G+ D+ + ALI+ YA CG++ L+++
Sbjct: 242 RTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKL 301
Query: 273 --------VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
+FD+M DLV W++++ YA Q +EAL+LF M PD T +S++
Sbjct: 302 GMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVI 361
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
SACSH G + + N + H+ ++ G L ++D+ + G +++A ++ MP + +
Sbjct: 362 SACSHVGALAQANWI-HTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRK-N 419
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQ--LEP 413
+ WS ++ + HG A ++K+ +EP
Sbjct: 420 VISWSSMINAFAMHGNADSAIKLFRRMKEVNIEP 453
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/596 (36%), Positives = 340/596 (57%), Gaps = 58/596 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ TL CA N Q Q+H H+I N +++ V L++MY++ G L+ A+ +F+
Sbjct: 281 FTTLLTLCANQRNDNQGRQIHAHLIR--ANITKNIIVETELVHMYSECGRLNYAKEIFNR 338
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHG 122
M +RN SW ++I GY Q+G +E RLF + L P+ FSL+S+L SC D G
Sbjct: 339 MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 398
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENM--EFRNVISWNSMIAAFR 179
+ +H ++ +++ + L++MY+K D AWKV++ + RN WNS++A +
Sbjct: 399 RELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYA 458
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L+ ++ F +M + + D T ++
Sbjct: 459 NKGLKKESFNHFLEMLESD-------------IEYDVLTMVTIVNLL------------- 492
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
V+ AL+ Y++CG+I+ ++ VFD M ++VSWN+++ Y+ HG +K
Sbjct: 493 ------------VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSK 540
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL L+ M + P+ TF+++LSACSH GLV+EG ++F SM E++ + + +HY CM
Sbjct: 541 EALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCM 600
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR GR+ +A++ + +MP+EP+ W LLG+CR H + + LAA +L +L+P +
Sbjct: 601 VDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNP 660
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V MSNIY +G + + IR+ MK V+K PG+SWIEI + + F +G K HP+ E
Sbjct: 661 GPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTE 720
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALH---DIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
I+ L L Q KG+GY+P+TS L DI+EE +EE L HSE+LAL +++
Sbjct: 721 EIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLIS---- 776
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++S IR+ KN+RIC DCH K S + G+ I+ RD+NRFHHF++ CSC DYW
Sbjct: 777 LPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 236/479 (49%), Gaps = 57/479 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD---ARHL 64
Y++L C + ++ +H MI+N N D ++ ++ +YA+ G LDD AR L
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNP--DAYLMTKILMLYARSGCLDDLCYARKL 131
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH-- 121
F+EMP+RN+ +W +I YA+ + E + +F +L+ P+ F+ AS L C L
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSR 191
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAA 177
GK VH+ + +V NALI+MY+K C DE KVF+ M RN ++WNS+I+A
Sbjct: 192 DGGKQVHSKLIACGFKGDTFVGNALIDMYAK-CDDEESCLKVFDEMGERNQVTWNSIISA 250
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
EAQ F N+ LFL Q +G+ PD TF+ +L CA +
Sbjct: 251 ------EAQ----FGHF-NDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQ 299
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+ + + + ++ L+H Y+ CG ++ +K++F++M + SWNS+++ Y +G+
Sbjct: 300 IHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGE 359
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG----NKVFHSMLENHGVVPQL 350
+EAL+LF M ++PD + S+LS+C Q+G N + + +E G++
Sbjct: 360 TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ-- 417
Query: 351 DHYACMVDLLGRVGRILEAEKLIRE-MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
+VD+ + G + A K+ + + + ++ +W+ +L G + E L+
Sbjct: 418 ---VVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKK--ESFNHFLE 472
Query: 410 QLEPG---DSLGFVQMSNI----------YCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
LE D L V + N+ Y G+ KAR + M G + +SW
Sbjct: 473 MLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNI-----VSW 526
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/564 (38%), Positives = 337/564 (59%), Gaps = 35/564 (6%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK---RNVVSWTALISGYAQHGNAEECFRLFCSLL 100
V N ++ Y++ G+L +AR +F EM + R+ VSW A+I QH E LF ++
Sbjct: 176 VNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMV 235
Query: 101 QYFFP-NEFSLASVL--ISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ + F++ASVL +C D + G+ H + +K + +V + LI++YSK CA
Sbjct: 236 RRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSK-CAGS 294
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
E KVFE + +++ WN+MI+ F L+ + E+ L+ FR++QR G
Sbjct: 295 MVECRKVFEEITAPDLVLWNTMISGF----------SLYEDLS--EDGLWCFREMQRNGF 342
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSK 271
PD C+F V AC+ L + VH+L K + V + NAL+ Y++CG++ ++
Sbjct: 343 RPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDAR 402
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VFD M H+ VS NS++ YA HG E+L+LF M ++ P+S TF+++LSAC H G
Sbjct: 403 RVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTG 462
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
V+EG K F+ M E + P+ +HY+CM+DLLGR G++ EAE++I MP P S+ W+ L
Sbjct: 463 KVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATL 522
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
LG+CRKHG LA AA + +LEP ++ +V +SN+Y + + +A +++ M+ V+
Sbjct: 523 LGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVK 582
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL---HDI 505
K PG SWIEI+ +VH F + HP + I + +++ ++K GYVP+ AL ++
Sbjct: 583 KKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEV 642
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
E + +E +L +HSEKLA+ F +++ E I ++KN+RIC DCHN +KL S L G+
Sbjct: 643 EPDERERRLLYHSEKLAVAFGLIST----EEGVPILVVKNLRICGDCHNAVKLISALTGR 698
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI VRD++RFH FK+ CSC DYW
Sbjct: 699 EITVRDTHRFHCFKEGHCSCRDYW 722
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 199/416 (47%), Gaps = 39/416 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L+ C N + + L +PN +F N LIN YAK + AR +FDE
Sbjct: 50 FTLLYSKCGSLHNAQTSFHL-----TQYPN----VFSYNTLINAYAKHSLIHIARRVFDE 100
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG--KL 124
+P+ ++VS+ LI+ YA G RLF + + + F+L+ V+ +C G +
Sbjct: 101 IPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQ 160
Query: 125 VHALALKFSLDAHVYVANALINMYS-KSCADEAWKVFENM---EFRNVISWNSMIAAFRA 180
+H + D + V NA++ YS K EA +VF M R+ +SWN+MI A
Sbjct: 161 LHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIV---A 217
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
C + + EA+ LFR++ R G+ D T + VL A + H
Sbjct: 218 CGQHREGM----------EAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHG 267
Query: 241 LIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ-A 298
++ K GF ++ + + LI Y++C GS+ ++VF+++T DLV WN+++ ++L+ +
Sbjct: 268 MMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLS 327
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++ L F M +PD +FV + SACS+ G +V +++ ++
Sbjct: 328 EDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNA 387
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG----ETRLAELAATK 407
+V + + G + +A ++ MP E ++V + ++ +HG RL EL K
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMP-EHNTVSLNSMIAGYAQHGVEVESLRLFELMLEK 442
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 141/304 (46%), Gaps = 42/304 (13%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
D + GK++HAL K + Y++N +YSK C A F ++ NV S+N++I
Sbjct: 24 DLITGKILHALYFKSLIPPSTYLSNHFTLLYSK-CGSLHNAQTSFHLTQYPNVFSYNTLI 82
Query: 176 AAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWC 217
A+ L A +F ++ + L LF +++ + D
Sbjct: 83 NAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGF 142
Query: 218 TFSIVLKACA---GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T S V+ AC GLV + +H + G + + NA++ Y+R G +S +++VF
Sbjct: 143 TLSGVITACGDDVGLVRQ-----LHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVF 197
Query: 275 DKMTY---HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+M D VSWN+++ A H + EA+ LF M ++ D T S+L+A +
Sbjct: 198 REMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFT--- 254
Query: 329 LVQE--GNKVFHSMLENHGVVPQLDHYACMVDLLGR-VGRILEAEKLIREMPMEPDSVIW 385
V++ G + FH M+ G + ++DL + G ++E K+ E+ PD V+W
Sbjct: 255 CVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEI-TAPDLVLW 313
Query: 386 SVLL 389
+ ++
Sbjct: 314 NTMI 317
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
TF +LKAC +H+L K T ++N Y++CGS+ ++ F
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
Y ++ S+N+++ AYA H A ++F + QPD ++ +L++A + G ++F
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIP-QPDIVSYNTLIAAYADRGECGPTLRLF 129
Query: 338 HSMLE-------------------NHGVVPQL---------DHYACMVDLL----GRVGR 365
+ E + G+V QL D YA + + + R G
Sbjct: 130 EEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGF 189
Query: 366 ILEAEKLIREMPMEP--DSVIWSVLLGSCRKHGE 397
+ EA ++ REM D V W+ ++ +C +H E
Sbjct: 190 LSEARRVFREMGEGGGRDEVSWNAMIVACGQHRE 223
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 325/559 (58%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV + LI+MYA G + AR +FD + VV W A+++ Y ++G+ E +F +L
Sbjct: 154 DRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGML 213
Query: 101 QYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ +E +L SV+ +C D GK V + L + + AL++MY+K C +
Sbjct: 214 EVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAK-CGEI 272
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A ++F+ M+ R+V++W++MI+ + + EAL LF ++Q +
Sbjct: 273 GKARRLFDGMQSRDVVAWSAMISGY-------------TQADQCREALGLFSEMQLARVE 319
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T VL ACA L VHS + + T++ AL+ YA+CG I + +
Sbjct: 320 PNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEA 379
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F+ M + +W +++K A +G+ +EAL+LFS+M ++P TF+ +L ACSH+ LV
Sbjct: 380 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLV 439
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG + F SM ++G+ P+++HY CMVDLLGR G + EA + IR MP+EP++VIW LL
Sbjct: 440 EEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
SC H + E A ++ L P S +V +SNIY +G + A ++RKEMK + K
Sbjct: 500 SCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKT 559
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IE++ V EF + HP+ I++K+EE+IG++K GYVP T+ ++EE K
Sbjct: 560 PGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREK 619
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E + HHSEKLA+ F +M + IR+ KN+R+C DCH+ KL S + +EIVVR
Sbjct: 620 EVSVSHHSEKLAIAFGLMK----LDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVR 675
Query: 571 DSNRFHHFKDRICSCNDYW 589
D N FHHFKD CSCNDYW
Sbjct: 676 DRNIFHHFKDGTCSCNDYW 694
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 191 FAKMKNEEEALFLFRQLQREGMA--PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
F + E+AL LF ++ A D T + LK+C+ + V + K G
Sbjct: 93 FLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLV 152
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
D + ++LIH YA CG ++ ++ VFD +V WN+I+ AY +G E +++F M
Sbjct: 153 ADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGM 212
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
V D T VS+++AC G + G K ++ G+ ++D+ + G
Sbjct: 213 LEVGVAFDEVTLVSVVTACGRIGDAKLG-KWVAGHVDEEGLARNPKLVTALMDMYAKCGE 271
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR--LAELAATKLKQLEPGD 415
I +A +L M D V WS ++ + + R L + +L ++EP D
Sbjct: 272 IGKARRLFDGM-QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPND 322
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/555 (39%), Positives = 324/555 (58%), Gaps = 29/555 (5%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FF 104
N L++MY+K G LD A+ +F EM R+VVS+T++I+GYA+ G A E +LF + +
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 105 PNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWK 158
P+ +++ +VL C GK VH + + ++V+NAL++MY+K C EA
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAK-CGSMREAEL 453
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG-MAPDWC 217
VF M +++ISWN++I + +K EAL LF L E +PD
Sbjct: 454 VFSEMRVKDIISWNTVIGGY-------------SKNCYANEALSLFNLLLVEKRFSPDER 500
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T + VL ACA L +H I + G+ D +AN+L+ YA+CG++ L++ +FD +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDI 560
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
T DLVSW ++ Y +HG KEA+ LF+ M ++PD +FVSLL ACSH+GLV EG
Sbjct: 561 TSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGW 620
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F+ M + P ++HYAC+VD+L R G + +A + I MP+ PD+ IW LL CR
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H + +LAE A K+ +LEP ++ +V M+NIY + + + + +RK + +RK PG S
Sbjct: 681 HHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCS 740
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
WIEI+ RV+ F +G +P+ E I L + ++ GY P T AL D EE KEE L
Sbjct: 741 WIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEAL 800
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ I++ G +IR+ KN+R+C DCH K S L +EIV+RDSNR
Sbjct: 801 CGHSEKLAMALGIISSG----HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNR 856
Query: 575 FHHFKDRICSCNDYW 589
FH FKD CSC +W
Sbjct: 857 FHQFKDGHCSCRGFW 871
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 204/418 (48%), Gaps = 36/418 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++ QLH +++ + E V N L+ Y K +D AR +FDEM +R+V+SW ++
Sbjct: 210 SVNGGEQLHGYILKSGFGERNS--VGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSI 267
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA---SVLISCDYLH----GKLVHALALKF 132
I+GY +G AE+ +F +L F E LA SV C G+ VH +K
Sbjct: 268 INGYVSNGLAEKGLSVFVQML--FSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKA 325
Query: 133 SLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
N L++MYSK C D A VF M R+V+S+ SMIA + L +A++L
Sbjct: 326 CFSREDRFCNTLLDMYSK-CGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
F +M + EG++PD T + VL CA VH I + D
Sbjct: 385 FEEM-------------EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFD 431
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
++NAL+ YA+CGS+ ++ VF +M D++SWN+++ Y+ + A EAL LF+ + V
Sbjct: 432 IFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLV 491
Query: 311 Q----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ PD T +L AC+ +G ++ H + +G +VD+ + G +
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREI-HGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQM 422
L A L ++ D V W+V++ HG + A +++Q +EP D + FV +
Sbjct: 551 LLARLLFDDIT-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEP-DEISFVSL 606
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 178/395 (45%), Gaps = 26/395 (6%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ CA ++K ++ + N D + + L MY G L +A +FD++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGN--GFVLDSNLGSKLALMYTNCGDLKEASRVFDQVK 156
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----GKL 124
+ W L++ A+ G+ LF ++ + ++ + V S L G+
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQ 216
Query: 125 VHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H LK V N+L+ Y K+ D A KVF+ M R+VISWNS+I + + L
Sbjct: 217 LHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+ + +F +M LF G+ D T V CA AVH
Sbjct: 277 AEKGLSVFVQM------LF-------SGIEIDLATIVSVFAGCADSRLISLGRAVHCFGV 323
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
K F + N L+ Y++CG + +K VF +M+ +VS+ S++ YA G A EA++
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M + PD T ++L+ C+ L+ EG +V + EN A M D+
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALM-DMY 442
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+ G + EAE + EM ++ D + W+ ++G K+
Sbjct: 443 AKCGSMREAELVFSEMRVK-DIISWNTVIGGYSKN 476
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 171/340 (50%), Gaps = 45/340 (13%)
Query: 4 STQIYAT--LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
S +Y + + CA + + + ++HE + N + D+FV+N L++MYAK G + +A
Sbjct: 394 SPDVYTVTAVLNCCARNRLLDEGKRVHEWIKEN--DMGFDIFVSNALMDMYAKCGSMREA 451
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCDY 119
+F EM ++++SW +I GY+++ A E LF LL + F P+E ++A VL +C
Sbjct: 452 ELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACAS 511
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
L G+ +H ++ + +VAN+L++MY+K A A +F+++ ++++SW M
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVM 571
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE 232
IA + + F K EA+ LF Q+++ G+ PD +F +L AC +GLV E
Sbjct: 572 IAGY--------GMHGFGK-----EAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDE 618
Query: 233 --------RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLV 283
RH + + Y ++ AR G++S + + + M D
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYA---------CIVDMLARTGNLSKAYRFIENMPIPPDAT 669
Query: 284 SWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
W ++L +H K A ++ + ++P++ + L++
Sbjct: 670 IWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMA 709
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 161/355 (45%), Gaps = 63/355 (17%)
Query: 132 FSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
F LD+++ AL MY+ +C D EA +VF+ ++ + WN ++
Sbjct: 125 FVLDSNLGSKLAL--MYT-NCGDLKEASRVFDQVKIEKALFWNILMNEL----------- 170
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
AK + ++ LF+++ G+ D TFS V K+ + L + +H I K GF +
Sbjct: 171 --AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGE 228
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ N+L+ Y + + +++VFD+MT D++SWNSI+ Y +G A++ L +F M
Sbjct: 229 RNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVF---------------HSMLENHGVVPQLD 351
++ D AT VS+ + C+ + L+ G V +++L+ + LD
Sbjct: 289 FSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 352 ---------------HYACMVDLLGRVGRILEAEKLIREMPME---PDSVIWSVLLGSCR 393
Y M+ R G EA KL EM E PD + +L C
Sbjct: 349 SAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 394 KHGETRLAELAATKLKQLEPGDSLGF-VQMSN----IYCLSGSFNKARLIRKEMK 443
++ RL + + ++ D +GF + +SN +Y GS +A L+ EM+
Sbjct: 409 RN---RLLDEGKRVHEWIKEND-MGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 11/257 (4%)
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQA-IELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F R V I F +A + F + N + A+ L + + P
Sbjct: 38 IFNRASLRTVSDRADSITTFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR-- 95
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T VL+ CA + + V + I GF D+ + + L Y CG + + +VFD++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV 155
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ WN ++ A G ++ LF M V+ DS TF + + S V G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGE 215
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++ H + G + +V + R+ A K+ EM E D + W+ ++
Sbjct: 216 QL-HGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT-ERDVISWNSIINGYVS 273
Query: 395 HGETRLAELAATKLKQL 411
+G LAE + Q+
Sbjct: 274 NG---LAEKGLSVFVQM 287
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/586 (36%), Positives = 335/586 (57%), Gaps = 37/586 (6%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
+++ P++ DL T ++ Y + G ++ AR +F+E+ + V W A+ISGY Q G
Sbjct: 223 VLDEMPDK-DDLTWTTMVVG-YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCA 280
Query: 91 ECFRLFCSLLQYFFP-NEFSLASVLISCD----YLHGKLVHA----LALKFSLDAHVYVA 141
+ F LF ++ P +EF+ SVL +C ++HGK VH L F +A + V
Sbjct: 281 DAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVN 340
Query: 142 NALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM--KNE- 197
NAL+ +YSK A ++F+ M ++V+SWN++++ + +A+E+F M KN+
Sbjct: 341 NALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDL 400
Query: 198 ---------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
E+AL LF Q++ E + P T++ + AC L +H +H+ +
Sbjct: 401 SWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHL 460
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ GFE NAL+ YA+CG+++ ++ VF M D VSWN+++ A HG +EAL
Sbjct: 461 VQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREAL 520
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF M + PD +F+++L+AC+HAGLV EG F SM + G+ P DHYA ++DL
Sbjct: 521 ELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDL 580
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR GRI EA LI+ MP EP IW +L CR +G+ AA +L ++ P +
Sbjct: 581 LGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTY 640
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
+ +SN Y +G + A +RK M+ V+K PG SWIE+ +++H F G +HP+ + ++
Sbjct: 641 ILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVY 700
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+ LE + +++ +GYVP+T LHD+E KE L+ HSEKLA+ F ++ +
Sbjct: 701 QFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLK----LPPGAT 756
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
+ ++KN+RIC DCH M S +G+EIVVRD RFHHFKD CSC
Sbjct: 757 VTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 72/424 (16%)
Query: 48 LINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--F 103
L+ A G L DA FD +P +R+ V A++S +A+ A +F +LL
Sbjct: 98 LVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 157
Query: 104 FPNEFSLASVLISCDYLHG------KLVHALALKFSLDAHVYVANALINMYSKSCADEA- 156
P+++S +++ + +H +H LK A + V+NALI +Y K EA
Sbjct: 158 RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 217
Query: 157 W---KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE---------------- 197
W KV + M ++ ++W +M+ + A +F ++ +
Sbjct: 218 WDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSG 277
Query: 198 --EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK----YGFEDDT 251
+A LFR++ E + D TF+ VL ACA H +VH I + + E
Sbjct: 278 MCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAAL 337
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA------------------ 293
+ NAL+ Y++ G I ++K++FD M D+VSWN+IL Y
Sbjct: 338 PVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK 397
Query: 294 ------------LHGQ-AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+HG +++AL+LF+ M +V+P T+ ++AC G ++ G ++
Sbjct: 398 NDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL- 456
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
H+ L G ++ + + G + +A + MP DSV W+ ++ + +HG
Sbjct: 457 HAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSVSWNAMISALGQHGH 515
Query: 398 TRLA 401
R A
Sbjct: 516 GREA 519
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
YA AC G +K QLH H++ F N L+ MYAK G ++DAR +F
Sbjct: 437 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNS---AGNALLTMYAKCGAVNDARLVFL 493
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
MP + VSW A+IS QHG+ E LF ++ + P+ S ++L +C+ H LV
Sbjct: 494 VMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN--HAGLV 551
Query: 126 -------HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVIS-WNSMIA 176
++ F + LI++ +S EA + + M F S W ++++
Sbjct: 552 DEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILS 611
Query: 177 AFR 179
R
Sbjct: 612 GCR 614
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/576 (36%), Positives = 329/576 (57%), Gaps = 32/576 (5%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H+I + + +D F+ + L++ Y K G DA LFDEMPK++ VSW +L+SG A+
Sbjct: 67 IHAHVIKSL--DYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKI 124
Query: 87 GNAEECFRLFCSLLQ--YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYV 140
G EC +FC + NEF+ SV+ +C G VH A+K L V V
Sbjct: 125 GQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKV 184
Query: 141 ANALINMYSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
NAL+NMY K + A+++F M ++++SWNS++A + A+
Sbjct: 185 VNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVA-------------VCAQNGMP 231
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
EA F ++ G PD T +L+AC R +H +I G +++ I L
Sbjct: 232 NEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTL 291
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPD 313
++ Y++ G ++ S++VF++++ D V+W ++L YA+HG KEA++ F + ++PD
Sbjct: 292 LNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPD 351
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
TF LLSACSH+GLV+EG F M + + V P+LDHY+CMVDLLGR G + +A +LI
Sbjct: 352 HVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELI 411
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
+ MP EP+S +W LLG+CR H L + AA L L+P D ++ +SN+Y +G +N
Sbjct: 412 KNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWN 471
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
A +R MK + + G S+IE N++H F HP I KKLEE++ +++ +G
Sbjct: 472 DASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVG 531
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
+V ET LHD++EE K + + HSEK+AL + ++ + + I+KN+RIC DCH
Sbjct: 532 FVHETESILHDVDEEVKIDMITKHSEKIALAYGLL----VTNADMPLVIIKNLRICRDCH 587
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N +K S + + I++RD+ RFH F +CSC DYW
Sbjct: 588 NTVKFVSMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 332/587 (56%), Gaps = 57/587 (9%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVV---------------------------- 74
F + L++MYAK G + DA+ +FDEM +NVV
Sbjct: 185 FTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDR 244
Query: 75 ---SWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVH 126
+WT +++G Q+G E +F + + ++++ S+L +C L GK +H
Sbjct: 245 DSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIH 304
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A ++ D +++V +AL++MYSK + A VF M +N+ISW +MI +
Sbjct: 305 AYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGY------- 357
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ EEA+ +F ++Q +G+ P+ T V+ +CA L + + H +
Sbjct: 358 ------GQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVS 411
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G +++AL+ Y +CGSI + ++FD+M +HD VS+ +++ YA G+AKE + LF
Sbjct: 412 GLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLF 471
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M V+P+ TF+ +LSACS +GLV++G FHSM ++HG+V DHY CM+DL R
Sbjct: 472 EKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSR 531
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
GR+ EAE+ IR+MP PD++ W+ LL +CR G+ + + AA L + +P + +V +
Sbjct: 532 SGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLL 591
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
+++ G +++ L+R+ M+ +V+K PG SWI+ +NRVH F++ + HP I++KL
Sbjct: 592 CSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKL 651
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
+ L ++ GY P+ S LHD+ + K L +HSEKLA+ F ++ E IR+
Sbjct: 652 QWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLI----FVPEEMPIRV 707
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+KN+R+CVDCHN K S + G++I+VRD+ RFH F + ICSC D+W
Sbjct: 708 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 216/429 (50%), Gaps = 42/429 (9%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T + L A A G + A +L + M + PN LF N L++ A L D L
Sbjct: 45 TYVLNHLLTAYARSGRLPLARRLFDAMPD--PN----LFTRNALLSALAHARLLPDMDRL 98
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--------YFFPNEFSLASVLIS 116
F MP+R+ VS+ ALI+G++ G + +LL+ P+ +++ ++++
Sbjct: 99 FASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMA 158
Query: 117 CDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
L G+ VH ++ A+ + + L++MY+K +A +VF+ M +NV+ +
Sbjct: 159 ASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMY 218
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMA 213
N+MI CK+ +A +F M + + EAL +FR+++ EG+
Sbjct: 219 NTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVG 278
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D TF +L AC L +H+ + ++ + + +AL+ Y++C SI L++ V
Sbjct: 279 IDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAV 338
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F +MT +++SW +++ Y +G +EA+++FS M ++P+ T S++S+C++ +
Sbjct: 339 FRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASL 398
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG + FH M G+ P + + +V L G+ G I +A +L EMP D V ++ L+
Sbjct: 399 EEGAQ-FHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH-DQVSYTALVS 456
Query: 391 SCRKHGETR 399
+ G+ +
Sbjct: 457 GYAQFGKAK 465
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/553 (38%), Positives = 323/553 (58%), Gaps = 25/553 (4%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FF 104
N L++MY+K G LD A+ +F EM R+VVS+T++I+GYA+ G A E +LF + +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 105 PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKV 159
P+ +++ +VL C GK VH + L ++V+NAL++MY+K + EA V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F M +++ISWN++I + +A+ LF + L+ + +PD T
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL------------LEEKRFSPDERTV 502
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ VL ACA L +H I + G+ D +AN+L+ YA+CG++ L+ +FD +
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
DLVSW ++ Y +HG KEA+ LF+ M ++ D +FVSLL ACSH+GLV EG +
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F+ M + P ++HYAC+VD+L R G +++A + I MP+ PD+ IW LL CR H
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 682
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ +LAE A K+ +LEP ++ +V M+NIY + + + + +RK + +RK PG SWI
Sbjct: 683 DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
EI+ RV+ F +G +P+ E I L ++ ++ GY P T AL D EE KEE L
Sbjct: 743 EIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCG 802
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+ I++ G +IR+ KN+R+C DCH K S L +EIV+RDSNRFH
Sbjct: 803 HSEKLAMALGIISSG----HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFH 858
Query: 577 HFKDRICSCNDYW 589
FKD CSC +W
Sbjct: 859 QFKDGHCSCRGFW 871
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 197/409 (48%), Gaps = 30/409 (7%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
QLH ++ + E V N L+ Y K +D AR +FDEM +R+V+SW ++I+GY
Sbjct: 216 QLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 86 HGNAEECFRLFCSLLQYFFPNEF-SLASVLISCDYLH----GKLVHALALKFSLDAHVYV 140
+G AE+ +F +L + ++ SV C G+ VH++ +K
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 141 ANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
N L++MYSK C D A VF M R+V+S+ SMIA + L +A++LF +M
Sbjct: 334 CNTLLDMYSK-CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM---- 388
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+ EG++PD T + VL CA VH I + D ++NAL+
Sbjct: 389 ---------EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDS 314
YA+CGS+ ++ VF +M D++SWN+I+ Y+ + A EAL LF+ + PD
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T +L AC+ +G ++ H + +G +VD+ + G +L A L
Sbjct: 500 RTVACVLPACASLSAFDKGREI-HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFD 558
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFVQM 422
++ D V W+V++ HG + A +++Q D + FV +
Sbjct: 559 DIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 167/354 (47%), Gaps = 24/354 (6%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFS 109
MY G L +A +FDE+ + W L++ A+ G+ LF ++ + ++
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 110 LASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENME 164
+ V S L G+ +H LK V N+L+ Y K+ D A KVF+ M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
R+VISWNS+I + + L E+ L +F Q+ G+ D T V
Sbjct: 258 ERDVISWNSIINGYVSNGL-------------AEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
CA AVHS+ K F + N L+ Y++CG + +K VF +M+ +VS
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
+ S++ YA G A EA++LF M + PD T ++L+ C+ L+ EG +V H +
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWI 423
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+ + + + ++D+ + G + EAE + EM ++ D + W+ ++G K+
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKN 476
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 168/340 (49%), Gaps = 45/340 (13%)
Query: 4 STQIYAT--LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
S +Y + + CA + + + ++HE + N + D+FV+N L++MYAK G + +A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN--DLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDY 119
+F EM ++++SW +I GY+++ A E LF LL+ F P+E ++A VL +C
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
L G+ +H ++ + +VAN+L++MY+K A A +F+++ ++++SW M
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE 232
IA + + F K EA+ LF Q+++ G+ D +F +L AC +GLV E
Sbjct: 572 IAGY--------GMHGFGK-----EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 618
Query: 233 --------RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLV 283
RH + + Y ++ AR G + + + + M D
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYA---------CIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 284 SWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
W ++L +H K A ++ + ++P++ + L++
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMA 709
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 189/433 (43%), Gaps = 74/433 (17%)
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC-- 117
D+ FD R+V + + + GN E +L C ++ + +L SVL C
Sbjct: 52 DSITTFD----RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI-DPRTLCSVLQLCAD 106
Query: 118 --DYLHGKLVHAL--ALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISW 171
GK V F +D+++ + L MY+ +C D EA +VF+ ++ + W
Sbjct: 107 SKSLKDGKEVDNFIRGNGFVIDSNL--GSKLSLMYT-NCGDLKEASRVFDEVKIEKALFW 163
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
N ++ AK + ++ LF+++ G+ D TFS V K+ + L +
Sbjct: 164 NILMNEL-------------AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+H I K GF + + N+L+ Y + + +++VFD+MT D++SWNSI+
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF----------- 337
Y +G A++ L +F M ++ D AT VS+ + C+ + L+ G V
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 338 ----HSMLENHGVVPQLD---------------HYACMVDLLGRVGRILEAEKLIREMPM 378
+++L+ + LD Y M+ R G EA KL EM
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 379 E---PDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF-VQMSN----IYCLSG 430
E PD + +L C ++ RL + + ++ D LGF + +SN +Y G
Sbjct: 391 EGISPDVYTVTAVLNCCARY---RLLDEGKRVHEWIKEND-LGFDIFVSNALMDMYAKCG 446
Query: 431 SFNKARLIRKEMK 443
S +A L+ EM+
Sbjct: 447 SMQEAELVFSEMR 459
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/593 (36%), Positives = 343/593 (57%), Gaps = 26/593 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S ++ T C+ + QLH ++ N QD + L+ Y+K +D+A
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD--IRTALMVTYSKCSSVDEAFK 362
Query: 64 LFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH 121
LF NVV+WTA+I G+ Q+ N E+ LFC + + PN F+ ++VL
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL 422
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRA 180
+HA +K + VA AL++ Y K+ E+ +VF ++ +++++W++M+
Sbjct: 423 LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGL-- 480
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG-LVTERHASAVH 239
A+ ++ E+A+ +F QL +EG+ P+ TFS V+ AC+ T H +H
Sbjct: 481 -----------AQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K G + +++AL+ Y++ G+I +++VF + D+VSWNS++ Y HG AK
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589
Query: 300 EALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL++F M Q D TF+ +L+AC+HAGLV+EG K F+ M++++ + +++HY+CM
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCM 649
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDL R G +A +I MP IW LL +CR H L +LAA KL L+P D+
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+G+V +SNI+ ++G++ + +RK M +V+K G SWIEI+NR+ F +G HP +
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSD 769
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
++ KLEEL +LK MGY P+T+ HD+EEEHKE L HSE+LA+ + ++
Sbjct: 770 LVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLI----ALPP 825
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+I KN+RIC DCHN ++L S + + ++VRDSNRFHHFK +CSC YW
Sbjct: 826 GAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 189/382 (49%), Gaps = 32/382 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ V L++MY K +D R +FDEM +NVVSWT+L+SGYA++G +E L +
Sbjct: 137 EDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM 196
Query: 100 -LQYFFPNEFSLASVLISC---DYLHGKL-VHALALKFSLDAHVYVANALINMYSKS-CA 153
++ PN F+ A+VL + + G + VHA+ +K + +V NALI MY KS
Sbjct: 197 QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMV 256
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A VF++M R+ ++WN MI + A + ++F +M+ G+
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMR-------------LAGVK 303
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
F LK C+ +H + K G+E I AL+ Y++C S+ + ++
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363
Query: 274 FDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGL 329
F H++V+W +++ + + ++A+ LF M+ V+P+ T+ ++L+ + L
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
Q ++ + E VP + ++D + G ++E+ ++ +P + D V WS +L
Sbjct: 424 SQLHAQIIKAYYEK---VPSV--ATALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAML 477
Query: 390 GSCRKHGETRLAELAATKLKQL 411
+TR +E A QL
Sbjct: 478 TGL---AQTRDSEKAMEVFIQL 496
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 154/340 (45%), Gaps = 23/340 (6%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC-- 117
A LFDE P +++ + L+ ++++ + E LF L + +L+ L C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
D + G+ VH +LK V V +L++MY K+ ++ +F+ M +NV+SW S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
++ + A+ +E + L Q+Q EG+ P+ TF+ VL A A
Sbjct: 177 LSGY-------------ARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEG 223
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH++I K GFE T + NALI Y + + ++ VFD M D V+WN ++ YA
Sbjct: 224 GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAA 283
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G E Q+F M V+ F + L CS + ++ +++N Q
Sbjct: 284 IGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDI 343
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
A MV + + EA KL + V W+ ++G
Sbjct: 344 RTALMVT-YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/584 (37%), Positives = 338/584 (57%), Gaps = 41/584 (7%)
Query: 17 LHG-NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVS 75
+HG +K + HEH++ L+++Y+K G +D A+ LFD M ++V+
Sbjct: 234 VHGYGVKCGLAEHEHVVTG-------------LMSLYSKCGDMDSAQFLFDRMDNPDLVA 280
Query: 76 WTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVL-ISCDYLH---GKLVHALAL 130
+ ALISGY+ +G E LF L + PN +L +V+ + + H + +HA +
Sbjct: 281 YNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVV 340
Query: 131 KFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
K LDA V+ AL +Y + + + A +F+ M + + SWN+MI+ +
Sbjct: 341 KARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGY----------- 389
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
A+ E A+ LF+ +Q + P+ T S L ACA L VH +I+K E
Sbjct: 390 --AQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLEL 447
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ + ALI YA+CGSI+ ++ +FD+M ++VSWN+++ Y LHGQ EAL+L+ +M
Sbjct: 448 NVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDML 507
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ P S+TF+S++ ACSH GLV EG KVF M + + P ++H CMVDLLGR G++
Sbjct: 508 DARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKL 567
Query: 367 LEAEKLIREMPMEP-DSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNI 425
EA +LI E P +W LLG+C H + LA+LA+ KL +L+ ++ +V +SN+
Sbjct: 568 NEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNL 627
Query: 426 YCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEEL 485
Y +++A ++R+E K ++ K PG + IEI +R H F +G HPQ EAI+ LE L
Sbjct: 628 YTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERL 687
Query: 486 IGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKN 545
++ GY P T AL+D+EEE KE + HSEKLA+ F +++ + IRI+KN
Sbjct: 688 TAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLST----EPGTEIRIIKN 743
Query: 546 IRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R+C+DCHN K S + + IVVRD++RFHHF+D +CSC DYW
Sbjct: 744 LRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 173/366 (47%), Gaps = 27/366 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV + L +Y K DDAR +FD +P + + W L++G E R+ +
Sbjct: 148 DTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDA-- 205
Query: 101 QYFFPNEFSLASVL-ISCDYLH---GKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
P+ +LAS L + + H G+ VH +K L H +V L+++YSK C D
Sbjct: 206 GRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSK-CGDMD 264
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A +F+ M+ +++++N++I+ + + ++E LF++L G P
Sbjct: 265 SAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVE-------------LFKELTASGWRP 311
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T V+ + E A +H+ + K + D +++ AL Y R + ++ +F
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIF 371
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M + SWN+++ YA +G + A+ LF M NVQP+ T S LSAC+H G +
Sbjct: 372 DAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALS 431
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G K H ++ + + ++D+ + G I EA + M + + V W+ ++
Sbjct: 432 LG-KWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK-NVVSWNAMISG 489
Query: 392 CRKHGE 397
HG+
Sbjct: 490 YGLHGQ 495
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 164/385 (42%), Gaps = 77/385 (20%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
D + +H L++ A +VA+AL +Y K S D+A KVF+ + + I WN+++A
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
++A+E F +M + + PD T + L+A A
Sbjct: 189 GLPG----SEALEAFVRMVDAGR------------VRPDSTTLASSLRAAAEASHMAMGR 232
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH K G + + L+ Y++CG + ++ +FD+M DLV++N+++ Y+++G
Sbjct: 233 CVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNG 292
Query: 297 QAKEALQLFSNMNV---QPDSATFVS-----------LLSACSHAGLV------------ 330
+ +++LF + +P+S+T V+ LL+ C HA +V
Sbjct: 293 MVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVST 352
Query: 331 ------------QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE---KLIRE 375
+ +F +MLE ++ + M+ + G A +L++E
Sbjct: 353 ALTTLYCRLNDMESARSIFDAMLEK-----TMESWNAMISGYAQNGLTEMAVALFQLMQE 407
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAE-----LAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+ ++P+ + S L +C G L + ++ KL+ + + ++Y G
Sbjct: 408 LNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLEL----NVYVMTALIDMYAKCG 463
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSW 455
S +AR I M V +SW
Sbjct: 464 SIAEARSIFDRMDNKNV-----VSW 483
>gi|302800503|ref|XP_002982009.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
gi|300150451|gb|EFJ17102.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
Length = 604
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/593 (37%), Positives = 337/593 (56%), Gaps = 35/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L AC N+ +LH ++ +F+ NH++ MY K G ++D F E
Sbjct: 36 YLDLLLACGRSRNLGNGRRLHARIVAT--GHQDVMFLANHILIMYGKCGGMEDLSRAFSE 93
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVL--ISCDYLH--G 122
M +RN+VSW A+IS YAQ+ + + +F LL P+ + SVL + LH
Sbjct: 94 MKRRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWA 153
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
KLVH LAL+ +H VA AL+NMYSK D A +VF+ + ++V+SW++MIAA+
Sbjct: 154 KLVHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAY--- 210
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ + EAL +F ++ EG+ + TF V+ AC + A +H
Sbjct: 211 ----------AQTGHGTEALEMFHRMDAEGIQANVITFVAVVHACVLVARITDARTIHRR 260
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I + G E +TV+ AL++ Y +CG + +K++FDK+T D+V W++IL+AYA HG + A
Sbjct: 261 IIEAGLESNTVLGTALLNMYGKCGGLPEAKKIFDKLTERDVVVWSAILEAYARHGHPRVA 320
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+LF+ M V+P+ TFV +L AC H G V EG F S++ +H + P H CM+D
Sbjct: 321 LKLFTLMQQEGVRPNDVTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLD 380
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+LGR G++ EAE I MP++ +++ WS+ LGSCR +G+ + AA K+ + P G
Sbjct: 381 MLGRAGKLEEAESFIARMPVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAG 440
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ ++++Y +G +A + + M+ +K PG S I + RVHEF + HPQ + I
Sbjct: 441 YLTLASMYTDAGMPEEAEAVARLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEI 500
Query: 479 FKKLEELIGQLKGMGYVPET-SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ L+ L + +GYVP+T L L +E + HSE+LAL F M+ +
Sbjct: 501 YSYLDVLHARALELGYVPDTRPLLLGSVERK-------LHSERLALAFGAMSVPG--KRN 551
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLL-GKEIVVRDSNRFHHFKDRICSCNDYW 589
S I I+KN+R+C DCH F K S + G+EI+VRD++RFH FKD +CSC DYW
Sbjct: 552 SPIHIIKNLRVCRDCHEFTKFVSRTMEGREIIVRDTSRFHLFKDGVCSCGDYW 604
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/562 (38%), Positives = 324/562 (57%), Gaps = 30/562 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ LI YA G ++ A +FDE+P ++VVSW A ISGYA+ GN +E LF +
Sbjct: 167 RDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKM 226
Query: 100 LQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
++ P+E ++ +VL +C G+ VH+ ++ + NALI++YSK C +
Sbjct: 227 MKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSK-CGE 285
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +F+ + ++VISWN++I + M +EAL LF+ + R G
Sbjct: 286 LETACGLFQGLSNKDVISWNTLIGGY-------------THMNLYKEALLLFQDMLRSGE 332
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLS 270
P+ T +L ACA L +H I K G + + + +LI YA+CG I +
Sbjct: 333 KPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 392
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+QVFD M L SWN+++ +A+HG+A A +FS M ++PD TFV LLSACSH+
Sbjct: 393 QQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHS 452
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G++ G +F SM ++ ++P+L+HY CM+DL G G EAEK+I M MEPD VIW
Sbjct: 453 GMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCS 512
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +C+ HG L E A L ++EP + +V +SNIY + +N+ R + +
Sbjct: 513 LLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGM 572
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS L ++EE
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 632
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S + +EI
Sbjct: 633 EWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLISKIYKREI 688
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+ RD RFHHF+D CSCNDYW
Sbjct: 689 IARDRTRFHHFRDGECSCNDYW 710
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 198/419 (47%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +FD + + ++ W + G+A + +L+ C + PN ++ +
Sbjct: 50 FDGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFL 109
Query: 114 LISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LKF D +Y+ +LI+MY ++ ++A KV + R+V
Sbjct: 110 LKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDV 169
Query: 169 ISWNSMIAAFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQRE 210
+S+ ++I + + A ++F A+ N +EAL LF+++ +
Sbjct: 170 VSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKT 229
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T VL ACA + VHS I +GF + I NALI Y++CG + +
Sbjct: 230 NVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETA 289
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F ++ D++SWN+++ Y KEAL LF +M +P+ T +S+LSAC+H
Sbjct: 290 CGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHL 349
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ GV ++D+ + G I A+++ M + W
Sbjct: 350 GAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSW 407
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG A +++++ +EP D + FV + + SG + R I + M
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGIEP-DDITFVGLLSACSHSGMLDLGRHIFRSM 465
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 145/319 (45%), Gaps = 54/319 (16%)
Query: 112 SVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE----AWKVFENMEFR 166
S+L C L +++HA +K L Y + L+ S + A VF+ ++
Sbjct: 7 SLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEP 66
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
++ WN+M FR L + + AL L+ + G+ P+ TF +LK+C
Sbjct: 67 XLLIWNTM---FRGHALSSDPVS----------ALKLYVCMVSLGLLPNSYTFPFLLKSC 113
Query: 227 AGLVTERHASAVHSLIAKYGF--------------------ED-----------DTVIAN 255
A + +H + K+GF ED D V
Sbjct: 114 AKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYT 173
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI YA G I + ++FD++ D+VSWN+ + YA G KEAL+LF M NV+P
Sbjct: 174 ALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRP 233
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D +T V++LSAC+ +G ++ G +V HS + +HG L ++DL + G + A L
Sbjct: 234 DESTMVTVLSACAQSGSIELGRQV-HSWINDHGFGXNLKIVNALIDLYSKCGELETACGL 292
Query: 373 IREMPMEPDSVIWSVLLGS 391
+ + D + W+ L+G
Sbjct: 293 FQGLS-NKDVISWNTLIGG 310
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 327/556 (58%), Gaps = 35/556 (6%)
Query: 64 LFDE-MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL- 120
LF++ + K NV SW ++I+ A+ G++ E R F S+ + PN + + SC L
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
G+ H AL F + ++V++AL++MYSK C + +A +F+ + RN++SW SMI
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSK-CGELRDARTLFDEISHRNIVSWTSMI 149
Query: 176 AAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREG-MAPDW 216
+ +A+ +F M + E++ +F ++ ++G + +
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T S VL ACA ++R +H + K G E + + ++I Y +CG + ++++ FD+
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEG 333
M ++ SW++++ Y +HG AKEAL++F MN V+P+ TFVS+L+ACSHAGL++EG
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
F +M V P ++HY CMVDLLGR G + EA LI+ M + PD V+W LLG+CR
Sbjct: 330 WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACR 389
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H L E++A KL +L+P + +V +SNIY +G + +R MK S + K PG
Sbjct: 390 MHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGF 449
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S ++I+ RVH F G + HPQ E I++ LE+L +L+ +GYVP+ + LHD+ E KE
Sbjct: 450 SLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMV 509
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F IMN + I I+KN+R+C DCH +K S ++ +EIVVRDS
Sbjct: 510 LRVHSEKLAVAFGIMNT----VPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSK 565
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF+D +CSC DYW
Sbjct: 566 RFHHFRDGLCSCGDYW 581
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 186/417 (44%), Gaps = 85/417 (20%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
+C+ ++ Q H+ + F EP DLFV++ L++MY+K G L DAR LFDE+ RN+
Sbjct: 85 SCSALLDLHSGRQAHQQALI-FGFEP-DLFVSSALVDMYSKCGELRDARTLFDEISHRNI 142
Query: 74 VSWTALISGYAQHGNAEECFRLF-----------CSLLQYFFPNEFS------------- 109
VSWT++I+GY Q+ +A R+F S++ + N S
Sbjct: 143 VSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 202
Query: 110 ---------LASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE- 155
L++VL++C + GK +H +K L+++V+V ++I+MY K E
Sbjct: 203 GEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEM 262
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A K F+ M +NV SW++M+A + + +EAL +F ++ G+ P+
Sbjct: 263 ARKAFDRMREKNVKSWSAMVAG-------------YGMHGHAKEALEVFYEMNMAGVKPN 309
Query: 216 WCTFSIVLKAC--AGLVTE--------RHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ TF VL AC AGL+ E H V + YG ++ R G
Sbjct: 310 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYG---------CMVDLLGRAG 360
Query: 266 SISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAK----EALQLFSNMNVQPDSATFVSL 320
+ + + M D V W ++L A +H A +LF + P + + L
Sbjct: 361 YLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLF---ELDPKNCGYYVL 417
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
LS E + +++N G+V +VD+ GRV L + RE P
Sbjct: 418 LSNIYADAGRWEDVERMRILMKNSGLVKPPGF--SLVDIKGRVHVFLVGD---REHP 469
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/553 (38%), Positives = 322/553 (58%), Gaps = 25/553 (4%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FF 104
N L++MY+K G LD A+ +F EM R+VVS+T++I+GYA+ G A E +LF + +
Sbjct: 184 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 243
Query: 105 PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
P+ +++ +VL C GK VH + L ++V+NAL++MY+K EA V
Sbjct: 244 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 303
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F M +++ISWN++I + +A+ LF + L+ + +PD T
Sbjct: 304 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL------------LEEKRFSPDERTV 351
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ VL ACA L +H I + G+ D +AN+L+ YA+CG++ L+ +FD +
Sbjct: 352 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 411
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
DLVSW ++ Y +HG KEA+ LF+ M ++ D +FVSLL ACSH+GLV EG +
Sbjct: 412 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 471
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F+ M + P ++HYAC+VD+L R G +++A + I MP+ PD+ IW LL CR H
Sbjct: 472 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 531
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ +LAE A K+ +LEP ++ +V M+NIY + + + + +RK + +RK PG SWI
Sbjct: 532 DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 591
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
EI+ RV+ F +G +P+ E I L ++ ++ GY P T AL D EE KEE L
Sbjct: 592 EIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCG 651
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+ I++ G +IR+ KN+R+C DCH K S L +EIV+RDSNRFH
Sbjct: 652 HSEKLAMALGIISSG----HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFH 707
Query: 577 HFKDRICSCNDYW 589
FKD CSC +W
Sbjct: 708 QFKDGHCSCRGFW 720
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 197/409 (48%), Gaps = 30/409 (7%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
QLH ++ + E V N L+ Y K +D AR +FDEM +R+V+SW ++I+GY
Sbjct: 65 QLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 122
Query: 86 HGNAEECFRLFCSLLQYFFPNEF-SLASVLISCDYLH----GKLVHALALKFSLDAHVYV 140
+G AE+ +F +L + ++ SV C G+ VH++ +K
Sbjct: 123 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 182
Query: 141 ANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
N L++MYSK C D A VF M R+V+S+ SMIA + L +A++LF +M
Sbjct: 183 CNTLLDMYSK-CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM---- 237
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+ EG++PD T + VL CA VH I + D ++NAL+
Sbjct: 238 ---------EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 288
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDS 314
YA+CGS+ ++ VF +M D++SWN+I+ Y+ + A EAL LF+ + PD
Sbjct: 289 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 348
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T +L AC+ +G ++ H + +G +VD+ + G +L A L
Sbjct: 349 RTVACVLPACASLSAFDKGREI-HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFD 407
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFVQM 422
++ D V W+V++ HG + A +++Q D + FV +
Sbjct: 408 DIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 455
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 168/340 (49%), Gaps = 45/340 (13%)
Query: 4 STQIYAT--LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
S +Y + + CA + + + ++HE + N + D+FV+N L++MYAK G + +A
Sbjct: 243 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN--DLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDY 119
+F EM ++++SW +I GY+++ A E LF LL+ F P+E ++A VL +C
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
L G+ +H ++ + +VAN+L++MY+K A A +F+++ ++++SW M
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE 232
IA + + F K EA+ LF Q+++ G+ D +F +L AC +GLV E
Sbjct: 421 IAGY--------GMHGFGK-----EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 467
Query: 233 --------RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLV 283
RH + + Y ++ AR G + + + + M D
Sbjct: 468 GWRFFNIMRHECKIEPTVEHYA---------CIVDMLARTGDLIKAYRFIENMPIPPDAT 518
Query: 284 SWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
W ++L +H K A ++ + ++P++ + L++
Sbjct: 519 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMA 558
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
AK + ++ LF+++ G+ D TFS V K+ + L + +H I K GF +
Sbjct: 19 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 78
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
+ N+L+ Y + + +++VFD+MT D++SWNSI+ Y +G A++ L +F M
Sbjct: 79 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 138
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVF---------------HSMLENHGVVPQLD- 351
++ D AT VS+ + C+ + L+ G V +++L+ + LD
Sbjct: 139 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 198
Query: 352 --------------HYACMVDLLGRVGRILEAEKLIREMPME---PDSVIWSVLLGSCRK 394
Y M+ R G EA KL EM E PD + +L C +
Sbjct: 199 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 258
Query: 395 HGETRLAELAATKLKQLEPGDSLGF-VQMSN----IYCLSGSFNKARLIRKEMK 443
+ RL + + ++ D LGF + +SN +Y GS +A L+ EM+
Sbjct: 259 Y---RLLDEGKRVHEWIKEND-LGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 308
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/581 (37%), Positives = 337/581 (58%), Gaps = 37/581 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+FV N L+ MY + ++ AR +FD+M +R+VVSW+ +I +++ + L +
Sbjct: 157 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 216
Query: 100 -LQYFFPNEFSLASVL----ISCDYLHGKLVHALALKFSLDAH--VYVANALINMYSKSC 152
P+E ++ S++ + + GK +HA ++ S + H V AL++MY+K C
Sbjct: 217 NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAK-C 275
Query: 153 A--DEAWKVFENMEFRNVISWNSMIAA-FRACKLEAQAIELFAKMKNEE----------- 198
A ++F + + V+SW +MIA R+ +LE +A LF +N +
Sbjct: 276 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE-EARALFDSTQNRDVMIWTAMLSAY 334
Query: 199 -------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+A LF Q++ G+ P T +L CA VHS I K E D
Sbjct: 335 AQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDC 394
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
++ AL+ YA+CG I+ + ++F + D+ WN+I+ +A+HG +EAL +F+ M
Sbjct: 395 ILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 454
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
V+P+ TF+ LL ACSHAGLV EG K+F M+ G+VPQ++HY CMVDLLGR G + E
Sbjct: 455 GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDE 514
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A ++I+ MP++P++++W L+ +CR H +L ELAAT+L ++EP + V MSNIY
Sbjct: 515 AHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAA 574
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
+ ++ A +RK MK ++K PG S IE+ VHEF G + HPQ I + L E+ +
Sbjct: 575 ANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRK 634
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
L GYVP+TS L +I+EE KE L +HSEKLA+ F +++ + IRI+KN+R+
Sbjct: 635 LNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAP----STPIRIVKNLRV 690
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH KL S + G+ I+VRD NRFHHF++ CSC DYW
Sbjct: 691 CNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 163/384 (42%), Gaps = 59/384 (15%)
Query: 76 WTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----GKLVHALAL 130
W +I+ Y + ++ L + F + F SVL +C + GK +H L
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 131 KFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
K LD V+V NAL+ MY + +C + A VF+ M R+V+SW++MI +
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRS------------ 199
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
++ K + AL L R++ + P ++ A R A+H+ + + +
Sbjct: 200 -LSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 258
Query: 250 DTVI--ANALIHAYARCGSISLSKQVFDKMTYHDLVS----------------------- 284
+ AL+ YA+CG + L++Q+F+ +T +VS
Sbjct: 259 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDS 318
Query: 285 --------WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
W ++L AYA +A LF M V+P T VSLLS C+ AG + G
Sbjct: 319 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 378
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K HS ++ V +VD+ + G I A +L E + D +W+ ++
Sbjct: 379 -KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFA 436
Query: 394 KH--GETRLAELAATKLKQLEPGD 415
H GE L A + + ++P D
Sbjct: 437 MHGYGEEALDIFAEMERQGVKPND 460
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 191/447 (42%), Gaps = 88/447 (19%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
N++ +H ++I N NE + T L++MYAK G+L AR LF+ + ++ VVSWTA
Sbjct: 239 ANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTA 298
Query: 79 LISG-------------------------------YAQHGNAEECFRLFCSL-LQYFFPN 106
+I+G YAQ ++ F LF + P
Sbjct: 299 MIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 358
Query: 107 EFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVF 160
+ ++ S+L C GK VH+ K ++ + AL++MY+K C D A ++F
Sbjct: 359 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAK-CGDINAAGRLF 417
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
R++ WN++I FA EEAL +F +++R+G+ P+ TF
Sbjct: 418 IEAISRDICMWNAIITG-------------FAMHGYGEEALDIFAEMERQGVKPNDITFI 464
Query: 221 IVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+L AC AGLVTE ++ +G ++ R G + + ++ M
Sbjct: 465 GLLHACSHAGLVTE-GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMP 523
Query: 279 YH-DLVSWNSILKAYALHGQAK----EALQLFSNMNVQPDSATFVSLLSAC-------SH 326
+ + W +++ A LH + A QL + ++P++ + L+S S
Sbjct: 524 IKPNTIVWGALVAACRLHKNPQLGELAATQL---LEIEPENCGYNVLMSNIYAAANRWSD 580
Query: 327 AGLVQEGNKVF-------HSMLENHGVVPQLDHYACMVD----LLGRVGRIL-EAEKLIR 374
A V++ K HS++E +G V H M D + R+ +L E + +
Sbjct: 581 AAGVRKTMKTVGMKKEPGHSVIEVNGTV----HEFLMGDQSHPQIRRINEMLAEMRRKLN 636
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLA 401
E PD+ +VLL + ET L
Sbjct: 637 EAGYVPDTS--TVLLNIDEEEKETALT 661
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 14/268 (5%)
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I + K AL ++ QL++ D VLKAC + + +H + K G
Sbjct: 96 ITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGL 155
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ D + NAL+ Y C + ++ VFDKM D+VSW++++++ + + + AL+L
Sbjct: 156 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 215
Query: 308 MN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN----HGVVPQLDHYACMVDLL 360
MN V+P VS+++ + ++ G + ++ N H VP ++D+
Sbjct: 216 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTT---TALLDMY 272
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
+ G + A +L + + V W+ ++ C + RL E A + D + +
Sbjct: 273 AKCGHLGLARQLFNGL-TQKTVVSWTAMIAGCIR--SNRLEE-ARALFDSTQNRDVMIWT 328
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVR 448
M + Y + ++A + +M+ S VR
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSGVR 356
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNH---LINMYAKFGYLDDARHL 64
+ L HAC+ G + + +L E M++ F PQ H ++++ + G LD+A +
Sbjct: 463 FIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQ----IEHYGCMVDLLGRAGLLDEAHEM 518
Query: 65 FDEMP-KRNVVSWTALISGYAQHGNAE 90
MP K N + W AL++ H N +
Sbjct: 519 IKSMPIKPNTIVWGALVAACRLHKNPQ 545
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/555 (37%), Positives = 327/555 (58%), Gaps = 27/555 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V +++ Y K G + AR +FD MP +N VSW A+I GYAQ+G++ E LF +++
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257
Query: 104 FP-NEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
+ S+ + L +C L G VH L ++ LD++V V NALI MYSK D A
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
VF+ ++ R +SWN+MI C A+ E+A+ LF ++Q E + PD
Sbjct: 318 HVFDELDRRTQVSWNAMILG---C----------AQNGCSEDAVRLFTRMQLENVKPDSF 364
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T V+ A A + A +H + + D + ALI YA+CG +++++ +F+
Sbjct: 365 TLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSA 424
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+++WN+++ Y HG K A++LF M + P+ TF+S+LSACSHAGLV EG
Sbjct: 425 RERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGR 484
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM E++G+ P ++HY MVDLLGR G++ EA I++MPM+P ++ +LG+C+
Sbjct: 485 EYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKL 544
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H LAE +A K+ +L P + + V ++NIY + + +R M+ + ++K PG S
Sbjct: 545 HKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWS 604
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
I+++N +H F SG H Q + I+ +L +LI ++K +GYVP+T ++HD+E++ K + L
Sbjct: 605 IIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTD-SIHDVEDDVKAQLL 663
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ F ++ + I+I KN+R+C DCHN KL S + G+EI++RD R
Sbjct: 664 NTHSEKLAIAFGLIRTAP----GTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQR 719
Query: 575 FHHFKDRICSCNDYW 589
FHHFKD CSC DYW
Sbjct: 720 FHHFKDGKCSCGDYW 734
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 193/406 (47%), Gaps = 37/406 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ + +L CA G++ +H + + + L NMYAK DAR +F
Sbjct: 60 RTFTSLLKLCAARGDLATGRAVHAQLAARGID--SEALAATALANMYAKCRRPADARRVF 117
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYLHGK 123
D MP R+ V+W AL++GYA++G A + + + P+ +L SVL +C
Sbjct: 118 DRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARAL 177
Query: 124 L----VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
HA A++ L+ V VA A+++ Y K C D A VF+ M +N +SWN+M
Sbjct: 178 AACREAHAFAIRSGLEELVNVATAILDAYCK-CGDIRAARVVFDWMPTKNSVSWNAM--- 233
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
I+ +A+ + EAL LF ++ EG+ + L+AC L
Sbjct: 234 ----------IDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMR 283
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH L+ + G + + + NALI Y++C + L+ VFD++ VSWN+++ A +G
Sbjct: 284 VHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGC 343
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH-- 352
+++A++LF+ M NV+PDS T VS++ A L + + + + + LD
Sbjct: 344 SEDAVRLFTRMQLENVKPDSFTLVSVIPA-----LADISDPLQARWIHGYSIRLHLDQDV 398
Query: 353 --YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + GR+ +++ E + W+ ++ HG
Sbjct: 399 YVLTALIDMYAKCGRV-NIARILFNSARERHVITWNAMIHGYGSHG 443
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 21/317 (6%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMI 175
D G+ VHA +D+ A AL NMY+K C +A +VF+ M R+ ++WN+++
Sbjct: 74 DLATGRAVHAQLAARGIDSEALAATALANMYAK-CRRPADARRVFDRMPVRDRVAWNALV 132
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A + L A+E+ +M+ EE G PD T VL ACA
Sbjct: 133 AGYARNGLARMAMEMVVRMQEEE------------GERPDSITLVSVLPACANARALAAC 180
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
H+ + G E+ +A A++ AY +CG I ++ VFD M + VSWN+++ YA +
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 296 GQAKEALQLFSNMNVQPDSATFVSLLS---ACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G ++EAL LF+ M + T VS+L+ AC G + EG +V H +L G+ +
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRV-HELLVRIGLDSNVSV 299
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
++ + + R+ A + E+ V W+ ++ C ++G + A T++ QLE
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRT-QVSWNAMILGCAQNGCSEDAVRLFTRM-QLE 357
Query: 413 PGDSLGFVQMSNIYCLS 429
F +S I L+
Sbjct: 358 NVKPDSFTLVSVIPALA 374
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 6/206 (2%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
AL F + G P TF+ +LK CA AVH+ +A G + + + A AL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ----PDSA 315
YA+C + +++VFD+M D V+WN+++ YA +G A+ A+++ M + PDS
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T VS+L AC++A + + H+ G+ ++ ++D + G I A +
Sbjct: 163 TLVSVLPACANARALAACREA-HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLA 401
MP + +SV W+ ++ ++G++R A
Sbjct: 222 MPTK-NSVSWNAMIDGYAQNGDSREA 246
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
QD++V LI+MYAK G ++ AR LF+ +R+V++W A+I GY HG + LF +
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEM 455
Query: 100 LQY-FFPNEFSLASVLISCDYLHGKLVH-------ALALKFSLDAHVYVANALINMYSKS 151
PNE + SVL +C H LV ++ + L+ + ++++ ++
Sbjct: 456 KSIGIVPNETTFLSVLSACS--HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRA 513
Query: 152 CA-DEAWKVFENMEFRNVIS-WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
DEAW + M +S + +M+ ACKL + +EL EE A +F +
Sbjct: 514 GKLDEAWAFIQKMPMDPGLSVYGAMLG---ACKLH-KNVEL-----AEESAQKIFELGPQ 564
Query: 210 EGM 212
EG+
Sbjct: 565 EGV 567
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/592 (35%), Positives = 341/592 (57%), Gaps = 30/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G+++ Q+H +I N + +V + LI+MYAK G LD A +
Sbjct: 453 YPSILKTCIRLGDLELGEQIHSQIIKT--NFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 510
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
++VVSWT +I+GY Q+ ++ F +L +E L + + +C L G
Sbjct: 511 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 570
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA A + + NAL+ +YS+ C +E++ FE E + I+WN++++ F+
Sbjct: 571 QQIHAQACVSGFSSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQ- 628
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ N EEAL +F ++ REG+ + TF +KA + + VH+
Sbjct: 629 ------------QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 676
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+I K G++ +T + NALI YA+CGSIS +++ F +++ + VSWN+I+ AY+ HG E
Sbjct: 677 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 736
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL F M NV+P+ T V +LSACSH GLV +G F SM +G+ P+ +HY C+V
Sbjct: 737 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 796
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+L R G + A++ I+EMP++PD+++W LL +C H + E AA L +LEP DS
Sbjct: 797 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA 856
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SN+Y +S ++ L R++MK V+K PG SWIE++N +H F G + HP +
Sbjct: 857 TYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADE 916
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I + ++L + +GYV + L++++ E K+ ++ HSEKLA+ F +++ +
Sbjct: 917 IHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVP-- 974
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I +MKN+R+C DCH ++K S + +EI+VRD+ RFHHF+ CSC DYW
Sbjct: 975 --INVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 189/379 (49%), Gaps = 31/379 (8%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQY 102
V N LI++Y++ G++D AR +FD + ++ SW A+ISG +++ E RLFC + +
Sbjct: 184 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 243
Query: 103 FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
P ++ +SVL +C + G+ +H L LK + YV NAL+++Y A
Sbjct: 244 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 303
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F NM R+ +++N++I C +A+ELF +M +G+ PD
Sbjct: 304 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-------------HLDGLEPDSN 350
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T + ++ AC+ T +H+ K GF + I AL++ YA+C I + F +
Sbjct: 351 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 410
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGN 334
++V WN +L AY L + + ++F M ++ P+ T+ S+L C G ++ G
Sbjct: 411 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 470
Query: 335 KVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
++ +++ + QL+ Y C ++D+ ++G++ A ++ + D V W+ ++
Sbjct: 471 QIHSQIIKTN---FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG- 525
Query: 393 RKHGETRLAELAATKLKQL 411
+ + + A T +Q+
Sbjct: 526 --YTQYNFDDKALTTFRQM 542
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 30/405 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++++ AC +++ QLH ++ F + D +V N L+++Y G L A H+F
Sbjct: 251 FSSVLSACKKIESLEIGEQLHGLVLKLGFSS---DTYVCNALVSLYFHLGNLISAEHIFS 307
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLH 121
M +R+ V++ LI+G +Q G E+ LF + L P+ +LAS++++C
Sbjct: 308 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +HA K ++ + AL+N+Y+K CAD A F E NV+ WN M+ A+
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAK-CADIETALDYFLETEVENVVLWNVMLVAYG 426
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L ++N + +FRQ+Q E + P+ T+ +LK C L +H
Sbjct: 427 ----------LLDDLRN---SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 473
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S I K F+ + + + LI YA+ G + + + + D+VSW +++ Y +
Sbjct: 474 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 533
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL F M ++ D + +SAC+ ++EG ++ H+ G L +
Sbjct: 534 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNAL 592
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V L R G+I E L E D++ W+ L+ ++ G A
Sbjct: 593 VTLYSRCGKI-EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 636
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 186/395 (47%), Gaps = 28/395 (7%)
Query: 6 QIYATLFHAC-ALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
Q L C +G++ + +LH ++ + ++ L + Y G L A +
Sbjct: 45 QTLKWLLEGCLKTNGSLDEGRKLHSQILK--LGLDSNGCLSEKLFDFYLFKGDLYGAFKV 102
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----- 118
FDEMP+R + +W +I A E F LF ++ + PNE + + VL +C
Sbjct: 103 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 162
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
+ + +HA L L V N LI++YS++ D A +VF+ + ++ SW +MI+
Sbjct: 163 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 222
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ EA+AI LF M ++ G+ P FS VL AC + +
Sbjct: 223 LSKNECEAEAIRLFCDM-------YVL------GIMPTPYAFSSVLSACKKIESLEIGEQ 269
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H L+ K GF DT + NAL+ Y G++ ++ +F M+ D V++N+++ + G
Sbjct: 270 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 329
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
++A++LF M ++PDS T SL+ ACS G + G ++ H+ G
Sbjct: 330 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEG 388
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+++L + I A E +E + V+W+V+L
Sbjct: 389 ALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 422
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/637 (36%), Positives = 339/637 (53%), Gaps = 75/637 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ AC + Q ++H + I N D+FV N LI+ YAK G +++A +F+ M
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRN--GTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 290
Query: 71 RNVVSWTALISGYAQHGNAEECFRLF--------------------------CS------ 98
++VVSW A+++GY+Q GN + F LF CS
Sbjct: 291 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 350
Query: 99 LLQYFF----PNEFSLASVLISCDYL----HGKLVHALALKFSL----------DAHVYV 140
Q F PN ++ SVL +C L G +HA +LK L D + V
Sbjct: 351 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMV 410
Query: 141 ANALINMYSKSCADEAWK-VFEN--MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
NALI+MYSK + +A + +F++ +E RNV++W MI A++LF +M +E
Sbjct: 411 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 470
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV--IAN 255
G+AP+ T S +L ACA L R +H+ + ++ D + +AN
Sbjct: 471 PY-----------GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVAN 519
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
LI+ Y++CG + ++ VFD M+ +SW S++ Y +HG+ EAL +F M P
Sbjct: 520 CLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVP 579
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D TF+ +L ACSH G+V +G F SM ++G+ P+ +HYA +DLL R GR+ +A K
Sbjct: 580 DDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKT 639
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
+++MPMEP +V+W LL +CR H LAE A KL ++ + + +SNIY +G +
Sbjct: 640 VKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 699
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
IR MK S ++K PG SW++ + F G + HP I+ LE LI ++K M
Sbjct: 700 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAM 759
Query: 493 GYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDC 552
GYVPET+ ALHD++EE K L HSEKLAL + ++ C IRI KN+R+C DC
Sbjct: 760 GYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCP----IRITKNLRVCGDC 815
Query: 553 HNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
H+ S ++ EIVVRD +RFHHFK+ CSC YW
Sbjct: 816 HSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 184/359 (51%), Gaps = 45/359 (12%)
Query: 10 TLFHACALHGNIKQAMQLHEHMI--------NNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
++ ACA G Q M++H + + N+F E +DL V N LI+MY+K A
Sbjct: 368 SVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 427
Query: 62 RHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF---PNEFSLASVLIS 116
R +FD++P +RNVV+WT +I G+AQ+G++ + +LF ++ + PN ++++ +L++
Sbjct: 428 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 487
Query: 117 CDYLH----GKLVHALALK-FSLDAHVY-VANALINMYSKSCA--DEAWKVFENMEFRNV 168
C +L GK +HA L+ D+ Y VAN LINMYSK C D A VF++M ++
Sbjct: 488 CAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK-CGDVDTARHVFDSMSQKSA 546
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA- 227
ISW SM+ + ++A+++F KM+ + G PD TF +VL AC+
Sbjct: 547 ISWTSMMTGYGMHGRGSEALDIFDKMR-------------KAGFVPDDITFLVVLYACSH 593
Query: 228 -GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS-KQVFDKMTYHDLVSW 285
G+V ++ S S+ A YG I AR G + + K V D V W
Sbjct: 594 CGMV-DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVW 652
Query: 286 NSILKAYALHGQ---AKEALQLFSNMNVQPD-SATFVSLLSACSHAGLVQEGNKVFHSM 340
++L A +H A+ AL MN + D S T +S + A AG ++ ++ H M
Sbjct: 653 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYAT--AGRWKDVARIRHLM 709
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 187/430 (43%), Gaps = 69/430 (16%)
Query: 34 NFPNEPQDLFVT-----NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN 88
+ P P + F++ ++ Y G D A + + + V W LI + + G
Sbjct: 38 SLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGR 97
Query: 89 AEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANA 143
+ + C +L+ + F+L VL +C Y G H L +++V++ NA
Sbjct: 98 LDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNA 157
Query: 144 LINMYSKSCA-DEAWKVFENMEFR---NVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
L+ MYS+ + +EA +F+ + R +VISWNS+++A A++LF+KM
Sbjct: 158 LVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM----- 212
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
L + + E D + +L AC L VH + G D + NALI
Sbjct: 213 TLIVHEKPTNE--RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALID 270
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ-------- 311
AYA+CG + + +VF+ M + D+VSWN+++ Y+ G K A +LF NM +
Sbjct: 271 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVT 330
Query: 312 ------------------------------PDSATFVSLLSACSHAGLVQEGNKVFHSML 341
P+ T +S+LSAC+ G +G ++ L
Sbjct: 331 WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSL 390
Query: 342 EN---------HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGS 391
+N G L Y ++D+ + A + ++P+E +V+ W+V++G
Sbjct: 391 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 450
Query: 392 CRKHGETRLA 401
++G++ A
Sbjct: 451 HAQYGDSNDA 460
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/560 (35%), Positives = 325/560 (58%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV+ LI++Y+K G +D+A L ++ SW A++ GY + + + F +
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091
Query: 101 QYFFP-NEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ P +E +LA+ + + L GK + A A+K + ++V++ +++MY K C D
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK-CGDM 1150
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A ++F + + ++W +MI+ + + +E+ AL ++ ++ G+
Sbjct: 1151 PNALELFGEISRPDEVAWTTMISGY-------------IENGDEDHALSVYHLMRVSGVQ 1197
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD TF+ ++KA + L +H+ + K + D + +L+ Y +CGS+ + +V
Sbjct: 1198 PDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRV 1257
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F KM +V WN++L A HG EAL LF M +QPD TF+ +LSACSH+GL
Sbjct: 1258 FRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF 1317
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
E K F +M + +G+ P+++HY+C+VD LGR GRI EAE +I MP + + ++ LLG
Sbjct: 1318 SEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLG 1377
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR G+ A+ A KL L+P DS +V +SNIY S ++ R MK V+K
Sbjct: 1378 ACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKD 1437
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG-YVPETSLALHDIEEEH 509
PG SWI+++N+VH F + HPQ I++K+E+L+ +++ G YVP+T L D+EEE
Sbjct: 1438 PGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEE 1497
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE LY+HSEKLA+ F +++ + IR++KN+R+C DCH+ +K S L +EIV+
Sbjct: 1498 KERALYYHSEKLAIAFGLIS----TPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVL 1553
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHF++ CSC DYW
Sbjct: 1554 RDANRFHHFRNGTCSCGDYW 1573
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 168/370 (45%), Gaps = 46/370 (12%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV+ L+N+Y K+G + AR LFD+MP+R+ V W ++ Y ++ +E R F +
Sbjct: 751 DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFH 810
Query: 101 QY-FFPNEFSLASVL--ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAW 157
+ FFP+ +L V+ ++ D + + HA +K Y A
Sbjct: 811 RSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVK------AY----------------AM 848
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K+F + N+ +WN + F AI+ F+ L R + D
Sbjct: 849 KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAID-------------CFKTLLRSTIGHDSV 895
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T I+L A G +H+L+ K F ++N+L++ Y++ G + +++ F
Sbjct: 896 TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG---LVQ 331
DL+SWN+++ +YA + EA+ F ++ ++PD T S+L ACS
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G++V H G++ ++DL + G++ EAE L+ + D W+ ++
Sbjct: 1016 LGSQV-HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIMFG 1073
Query: 392 CRKHGETRLA 401
K ++R A
Sbjct: 1074 YIKSNKSRKA 1083
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC-----DYLHGKLVH 126
N+ +W ++ + G F +LL+ ++ +++S D G+ +H
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 127 ALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
AL +K S V V+N+L+NMYSK+ A K F N ++ISWN+MI+++ LE
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH---ASAVHSLI 242
EA+ FR L R+G+ PD T + VL+AC+ + S VH
Sbjct: 978 -------------EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYA 1024
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K G +D+ ++ ALI Y++ G + ++ + DL SWN+I+ Y ++++AL
Sbjct: 1025 IKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKAL 1084
Query: 303 QLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+ FS M + D T + + A +++G ++ + G L + ++D+
Sbjct: 1085 EHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI-QAYAIKLGFNNDLWVSSGVLDM 1143
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ G + A +L E+ PD V W+ ++ ++G+
Sbjct: 1144 YIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIENGD 1180
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 172/389 (44%), Gaps = 62/389 (15%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++K + H ++ + + D ++TN+LI MY+K G L AR +FD+ R++V+W ++
Sbjct: 626 DLKLGKRAHARIVTS--GDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 80 ISGYAQ-----HGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG-----KLVHALA 129
++ YAQ + N E FRLF L ++ F + L+ L G + VH A
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 130 LKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
+K + ++V+ AL+N+Y K +A +F+ M R+ + WN M+ A
Sbjct: 744 VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA----------- 792
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT---ERHASAVHSLIAKY 245
+ + ++EAL F R G PD+ V+ V+ +RHA V
Sbjct: 793 --YVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQV------- 843
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
AYA + FD+ + ++ +WN L + GQ A+ F
Sbjct: 844 -------------KAYA------MKMFPFDQGS--NIFAWNKKLTEFLHAGQIVAAIDCF 882
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+ + DS T V +LSA A + G ++ H+++ P + ++++ +
Sbjct: 883 KTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI-HALVIKSSFAPVVPVSNSLMNMYSK 941
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G + AEK P E D + W+ ++ S
Sbjct: 942 AGVVYAAEKTFINSP-ELDLISWNTMISS 969
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 15/221 (6%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H+ I G D + N LI Y++CGS+ ++QVFDK + DLV+WNSIL AYA
Sbjct: 633 AHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFAD 692
Query: 298 AK-----EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ E +LF T LL C +G VQ V H G
Sbjct: 693 SSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV-HGYAVKIGFELD 751
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
L +V++ + G + +A L +MP E D+V+W+V+L + + E + A
Sbjct: 752 LFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVML---KAYVENSFQDEALRFFS 807
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
S F SN++C+ G N ++ +V+ Y
Sbjct: 808 AFH--RSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY 846
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/592 (35%), Positives = 341/592 (57%), Gaps = 30/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G+++ Q+H +I N + +V + LI+MYAK G LD A +
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKT--NFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
++VVSWT +I+GY Q+ ++ F +L +E L + + +C L G
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA A + + NAL+ +YS+ C +E++ FE E + I+WN++++ F+
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQ- 668
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ N EEAL +F ++ REG+ + TF +KA + + VH+
Sbjct: 669 ------------QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+I K G++ +T + NALI YA+CGSIS +++ F +++ + VSWN+I+ AY+ HG E
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 776
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL F M NV+P+ T V +LSACSH GLV +G F SM +G+ P+ +HY C+V
Sbjct: 777 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+L R G + A++ I+EMP++PD+++W LL +C H + E AA L +LEP DS
Sbjct: 837 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA 896
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SN+Y +S ++ L R++MK V+K PG SWIE++N +H F G + HP +
Sbjct: 897 TYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADE 956
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I + ++L + +GYV + L++++ E K+ ++ HSEKLA+ F +++ +
Sbjct: 957 IHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVP-- 1014
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I +MKN+R+C DCH ++K S + +EI+VRD+ RFHHF+ CSC DYW
Sbjct: 1015 --INVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 189/379 (49%), Gaps = 31/379 (8%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQY 102
V N LI++Y++ G++D AR +FD + ++ SW A+ISG +++ E RLFC + +
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 103 FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
P ++ +SVL +C + G+ +H L LK + YV NAL+++Y A
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F NM R+ +++N++I C +A+ELF +M +G+ PD
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-------------HLDGLEPDSN 390
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T + ++ AC+ T +H+ K GF + I AL++ YA+C I + F +
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGN 334
++V WN +L AY L + + ++F M ++ P+ T+ S+L C G ++ G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 335 KVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
++ +++ + QL+ Y C ++D+ ++G++ A ++ + D V W+ ++
Sbjct: 511 QIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG- 565
Query: 393 RKHGETRLAELAATKLKQL 411
+ + + A T +Q+
Sbjct: 566 --YTQYNFDDKALTTFRQM 582
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 30/405 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++++ AC +++ QLH ++ F + D +V N L+++Y G L A H+F
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSS---DTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLH 121
M +R+ V++ LI+G +Q G E+ LF + L P+ +LAS++++C
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +HA K ++ + AL+N+Y+K CAD A F E NV+ WN M+ A+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAK-CADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L ++N + +FRQ+Q E + P+ T+ +LK C L +H
Sbjct: 467 ----------LLDDLRN---SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S I K F+ + + + LI YA+ G + + + + D+VSW +++ Y +
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL F M ++ D + +SAC+ ++EG ++ H+ G L +
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNAL 632
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V L R G+I E L E D++ W+ L+ ++ G A
Sbjct: 633 VTLYSRCGKI-EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 186/395 (47%), Gaps = 28/395 (7%)
Query: 6 QIYATLFHAC-ALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
Q L C +G++ + +LH ++ + ++ L + Y G L A +
Sbjct: 85 QTLKWLLEGCLKTNGSLDEGRKLHSQILK--LGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----- 118
FDEMP+R + +W +I A E F LF ++ + PNE + + VL +C
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
+ + +HA L L V N LI++YS++ D A +VF+ + ++ SW +MI+
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ EA+AI LF M ++ G+ P FS VL AC + +
Sbjct: 263 LSKNECEAEAIRLFCDM-------YVL------GIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H L+ K GF DT + NAL+ Y G++ ++ +F M+ D V++N+++ + G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
++A++LF M ++PDS T SL+ ACS G + G ++ H+ G
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEG 428
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+++L + I A E +E + V+W+V+L
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 462
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/560 (35%), Positives = 325/560 (58%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV+ LI++Y+K G +D+A L ++ SW A++ GY + + + F +
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091
Query: 101 QYFFP-NEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ P +E +LA+ + + L GK + A A+K + ++V++ +++MY K C D
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK-CGDM 1150
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A ++F + + ++W +MI+ + + +E+ AL ++ ++ G+
Sbjct: 1151 PNALELFGEISRPDEVAWTTMISGY-------------IENGDEDHALSVYHLMRVSGVQ 1197
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD TF+ ++KA + L +H+ + K + D + +L+ Y +CGS+ + +V
Sbjct: 1198 PDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRV 1257
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F KM +V WN++L A HG EAL LF M +QPD TF+ +LSACSH+GL
Sbjct: 1258 FRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF 1317
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
E K F +M + +G+ P+++HY+C+VD LGR GRI EAE +I MP + + ++ LLG
Sbjct: 1318 SEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLG 1377
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR G+ A+ A KL L+P DS +V +SNIY S ++ R MK V+K
Sbjct: 1378 ACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKD 1437
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG-YVPETSLALHDIEEEH 509
PG SWI+++N+VH F + HPQ I++K+E+L+ +++ G YVP+T L D+EEE
Sbjct: 1438 PGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEE 1497
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE LY+HSEKLA+ F +++ + IR++KN+R+C DCH+ +K S L +EIV+
Sbjct: 1498 KERALYYHSEKLAIAFGLIS----TPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVL 1553
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHF++ CSC DYW
Sbjct: 1554 RDANRFHHFRNGTCSCGDYW 1573
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 167/370 (45%), Gaps = 46/370 (12%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV+ L+N+Y K+G + AR LFD+MP+R+ V W ++ Y ++ +E R F +
Sbjct: 751 DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFH 810
Query: 101 QYFFPNEFS-LASVL--ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAW 157
+ F +FS L V+ ++ D + + HA +K Y A
Sbjct: 811 RSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVK------AY----------------AM 848
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K+F + N+ +WN + F AI+ F+ L R + D
Sbjct: 849 KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAID-------------CFKTLLRSTIGHDSV 895
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T I+L A G +H+L+ K F ++N+L++ Y++ G + +++ F
Sbjct: 896 TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG---LVQ 331
DL+SWN+++ +YA + EA+ F ++ ++PD T S+L ACS
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G++V H G++ ++DL + G++ EAE L+ + D W+ ++
Sbjct: 1016 LGSQV-HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIMFG 1073
Query: 392 CRKHGETRLA 401
K ++R A
Sbjct: 1074 YIKSNKSRKA 1083
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC-----DYLHGKLVH 126
N+ +W ++ + G F +LL+ ++ +++S D G+ +H
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 127 ALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
AL +K S V V+N+L+NMYSK+ A K F N ++ISWN+MI+++ LE
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH---ASAVHSLI 242
EA+ FR L R+G+ PD T + VL+AC+ + S VH
Sbjct: 978 -------------EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYA 1024
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K G +D+ ++ ALI Y++ G + ++ + DL SWN+I+ Y ++++AL
Sbjct: 1025 IKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKAL 1084
Query: 303 QLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+ FS M + D T + + A +++G ++ + G L + ++D+
Sbjct: 1085 EHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI-QAYAIKLGFNNDLWVSSGVLDM 1143
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ G + A +L E+ PD V W+ ++ ++G+
Sbjct: 1144 YIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIENGD 1180
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 172/389 (44%), Gaps = 62/389 (15%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++K + H ++ + + D ++TN+LI MY+K G L AR +FD+ R++V+W ++
Sbjct: 626 DLKLGKRAHARIVTS--GDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 80 ISGYAQ-----HGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG-----KLVHALA 129
++ YAQ + N E FRLF L ++ F + L+ L G + VH A
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 130 LKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
+K + ++V+ AL+N+Y K +A +F+ M R+ + WN M+ A
Sbjct: 744 VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA----------- 792
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT---ERHASAVHSLIAKY 245
+ + ++EAL F R G PD+ V+ V+ +RHA V
Sbjct: 793 --YVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQV------- 843
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
AYA + FD+ + ++ +WN L + GQ A+ F
Sbjct: 844 -------------KAYA------MKMFPFDQGS--NIFAWNKKLTEFLHAGQIVAAIDCF 882
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+ + DS T V +LSA A + G ++ H+++ P + ++++ +
Sbjct: 883 KTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI-HALVIKSSFAPVVPVSNSLMNMYSK 941
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G + AEK P E D + W+ ++ S
Sbjct: 942 AGVVYAAEKTFINSP-ELDLISWNTMISS 969
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 17/222 (7%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H+ I G D + N LI Y++CGS+ ++QVFDK + DLV+WNSIL AYA
Sbjct: 633 AHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFAD 692
Query: 298 AK-----EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ E +LF T LL C +G VQ V H G
Sbjct: 693 SSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV-HGYAVKIGFELD 751
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
L +V++ + G + +A L +MP E D+V+W+V+L + + E + A L+
Sbjct: 752 LFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVML---KAYVENSFQDEA---LR 804
Query: 410 QLEPGDSLGFV-QMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
GF SN++C+ G N ++ +V+ Y
Sbjct: 805 FFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY 846
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/590 (35%), Positives = 331/590 (56%), Gaps = 28/590 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ H A ++K +H +++ N + + LI+MY K L AR +FD +
Sbjct: 230 SITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLS 289
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKL 124
K +++SWTA+I+ Y N E RLF +L + FPNE ++ S++ C GKL
Sbjct: 290 KASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKL 349
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA L+ + +A A I+MY K C D A VF++ + ++++ W++MI+++
Sbjct: 350 LHAFTLRNGFTLSLVLATAFIDMYGK-CGDVRSARSVFDSFKSKDLMMWSAMISSY---- 404
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A+ +EA +F + G+ P+ T +L CA + +HS I
Sbjct: 405 ---------AQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYI 455
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K G + D ++ + + YA CG I + ++F + T D+ WN+++ +A+HG + AL
Sbjct: 456 DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAAL 515
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF M V P+ TF+ L ACSH+GL+QEG ++FH M+ G P+++HY CMVDL
Sbjct: 516 ELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDL 575
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G + EA +LI+ MPM P+ ++ L +C+ H +L E AA + LEP S
Sbjct: 576 LGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYN 635
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V MSNIY + + IR+ MK + K PG+S IE+ +HEF G + HP + ++
Sbjct: 636 VLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVY 695
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+ ++E+ +L+ GY P+ S LH+I++E K L +HSEKLA+ + +++
Sbjct: 696 EMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAP----GVP 751
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KN+R+C DCHN KL S + G+EI+VRD NRFHHFK+ CSC DYW
Sbjct: 752 IRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 199/423 (47%), Gaps = 32/423 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++ AC L + ++H ++ N D+FV N LI MY++ G L AR LFD
Sbjct: 126 VIPSVLKACCLIPSFLLGQEVHGFVVKN--GFHGDVFVCNALIMMYSEVGSLALARLLFD 183
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLIS----CDYLH 121
++ ++VVSW+ +I Y + G +E L + + P+E + S+ D
Sbjct: 184 KIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKL 243
Query: 122 GKLVHALALKFSL--DAHVYVANALINMYSKSCADEAW--KVFENMEFRNVISWNSMIAA 177
GK +HA ++ + V + ALI+MY K C + A+ +VF+ + ++ISW +MIAA
Sbjct: 244 GKAMHAYVMRNGKCGKSGVPLCTALIDMYVK-CENLAYARRVFDGLSKASIISWTAMIAA 302
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ C + + LF KM EGM P+ T ++K C
Sbjct: 303 YIHCNNLNEGVRLFVKMLG-------------EGMFPNEITMLSLVKECGTAGALELGKL 349
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+ + GF V+A A I Y +CG + ++ VFD DL+ W++++ +YA +
Sbjct: 350 LHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNC 409
Query: 298 AKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EA +F +M ++P+ T VSLL C+ AG ++ G K HS ++ G+ +
Sbjct: 410 IDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG-KWIHSYIDKQGIKGDMILKT 468
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLE 412
VD+ G I A +L E + D +W+ ++ + HGE L + +
Sbjct: 469 SFVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVT 527
Query: 413 PGD 415
P D
Sbjct: 528 PND 530
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 168/388 (43%), Gaps = 49/388 (12%)
Query: 17 LHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA---RHLFDEMPKRNV 73
LH N+ + QLH H I N ++ + + A Y +A L K N
Sbjct: 52 LHINLNETQQLHGHFIKTSSN-------CSYRVPLAALESYSSNAAIHSFLITSYIKNNC 104
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC----DYLHGKLVHALA 129
+ A I Y + + E + F + SVL +C +L G+ VH
Sbjct: 105 PADAAKIYAYMRGTDTEV--------------DNFVIPSVLKACCLIPSFLLGQEVHGFV 150
Query: 130 LKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
+K V+V NALI MYS+ A +F+ +E ++V+SW++MI ++ L
Sbjct: 151 VKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL----- 205
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG-- 246
+EAL L R + + P + A L + A+H+ + + G
Sbjct: 206 --------LDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKC 257
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
+ + ALI Y +C +++ +++VFD ++ ++SW +++ AY E ++LF
Sbjct: 258 GKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFV 317
Query: 307 NM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M + P+ T +SL+ C AG ++ G K+ H+ +G L +D+ G+
Sbjct: 318 KMLGEGMFPNEITMLSLVKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKC 376
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGS 391
G + A + + D ++WS ++ S
Sbjct: 377 GDVRSARSVFDSFKSK-DLMMWSAMISS 403
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 316/565 (55%), Gaps = 31/565 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D F++ LI YA G L AR +FDE P +N+ W AL+ A + +E +
Sbjct: 106 SDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLADM 165
Query: 100 LQYFFP-NEFSLASVLISCDYLHG---------KLVHALALKFSLDAHVYVANALINMYS 149
+ P + +S L +C + + VHA A++ H +VA LI+ Y+
Sbjct: 166 GRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYA 225
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
K A VF M RNV+SW++MI + + A AIELF M + L
Sbjct: 226 KLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLV------ 279
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
P+ T VL ACAG+ H +H+ I + GF+ + NAL+ Y RCG +
Sbjct: 280 -----PNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLE 334
Query: 269 LSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ + +F + + D+VSWNS++ Y +HG EA+Q+F M P TF+S+L AC
Sbjct: 335 VGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGAC 394
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SHAGLV EG +F SM+E +GV P+ +HYACMVDLLGR G++ EA +LIR M +EP +
Sbjct: 395 SHAGLVNEGKMLFESMVE-YGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQV 453
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LLG+CR HG AE+A + L LEP ++ +V +++IY + N+ ++++ ++
Sbjct: 454 WGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEE 513
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
+ K G SWIE++ ++H F S ++P E + + E + Q+K GYVP+T + L+D
Sbjct: 514 HALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYD 573
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
IE E KE L HSEKLA+ F ++N S VIRI KN+R+C DCH+ K S
Sbjct: 574 IEGEEKERILIGHSEKLAVAFGLINTCS----GEVIRITKNLRLCEDCHSVTKFISKFTE 629
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EIVVRD NRFHHF+D +CSC DYW
Sbjct: 630 REIVVRDVNRFHHFRDGVCSCGDYW 654
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/555 (37%), Positives = 327/555 (58%), Gaps = 27/555 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V +++ Y K G + AR +FD MP +N VSW A+I GYAQ+G++ E LF +++
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257
Query: 104 FP-NEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
+ S+ + L +C L G VH L ++ LD++V V NALI MYSK D A
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
VF+ ++ R +SWN+MI C A+ E+A+ LF ++Q E + PD
Sbjct: 318 HVFDELDRRTQVSWNAMILG---C----------AQNGCSEDAVRLFTRMQLENVKPDSF 364
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T V+ A A + A +H + + D + ALI YA+CG +++++ +F+
Sbjct: 365 TLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSA 424
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+++WN+++ Y HG K A++LF M + P+ TF+S+LSACSHAGLV EG
Sbjct: 425 RERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGR 484
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM E++G+ P ++HY MVDLLGR G++ EA I++MPM+P ++ +LG+C+
Sbjct: 485 EYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKL 544
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H LAE +A K+ +L P + + V ++NIY + + +R M+ + ++K PG S
Sbjct: 545 HKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWS 604
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
I+++N +H F SG H Q + I+ +L +LI ++K +GYVP+T ++HD+E++ K + L
Sbjct: 605 IIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTD-SIHDVEDDVKAQLL 663
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ F ++ + I+I KN+R+C DCHN KL S + G+EI++RD R
Sbjct: 664 NTHSEKLAIAFGLIRTAP----GTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQR 719
Query: 575 FHHFKDRICSCNDYW 589
FHHFKD CSC DYW
Sbjct: 720 FHHFKDGKCSCGDYW 734
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 193/406 (47%), Gaps = 37/406 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ + +L CA G++ +H + + + L NMYAK DAR +F
Sbjct: 60 RTFTSLLKLCAARGDLATGRAVHAQLAARGID--SEALAATALANMYAKCRRPADARRVF 117
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYLHGK 123
D MP R+ V+W AL++GYA++G A + + + P+ +L SVL +C
Sbjct: 118 DRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARAL 177
Query: 124 L----VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
HA A++ L+ V VA A+++ Y K C D A VF+ M +N +SWN+M
Sbjct: 178 AACREAHAFAIRSGLEELVNVATAILDAYCK-CGDIRAARVVFDWMPTKNSVSWNAM--- 233
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
I+ +A+ + EAL LF ++ EG+ + L+AC L
Sbjct: 234 ----------IDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMR 283
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH L+ + G + + + NALI Y++C + L+ VFD++ VSWN+++ A +G
Sbjct: 284 VHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGC 343
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH-- 352
+++A++LF+ M NV+PDS T VS++ A L + + + + + LD
Sbjct: 344 SEDAVRLFTRMQLENVKPDSFTLVSVIPA-----LADISDPLQARWIHGYSIRLHLDQDV 398
Query: 353 --YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + GR+ +++ E + W+ ++ HG
Sbjct: 399 YVLTALIDMYAKCGRV-NIARILFNSARERHVITWNAMIHGYGSHG 443
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 21/317 (6%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMI 175
D G+ VHA +D+ A AL NMY+K C +A +VF+ M R+ ++WN+++
Sbjct: 74 DLATGRAVHAQLAARGIDSEALAATALANMYAK-CRRPADARRVFDRMPVRDRVAWNALV 132
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A + L A+E+ +M+ EE G PD T VL ACA
Sbjct: 133 AGYARNGLARMAMEMVVRMQEEE------------GERPDSITLVSVLPACANARALAAC 180
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
H+ + G E+ +A A++ AY +CG I ++ VFD M + VSWN+++ YA +
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 296 GQAKEALQLFSNMNVQPDSATFVSLLS---ACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G ++EAL LF+ M + T VS+L+ AC G + EG +V H +L G+ +
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRV-HELLVRIGLDSNVSV 299
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
++ + + R+ A + E+ V W+ ++ C ++G + A T++ QLE
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRT-QVSWNAMILGCAQNGCSEDAVRLFTRM-QLE 357
Query: 413 PGDSLGFVQMSNIYCLS 429
F +S I L+
Sbjct: 358 NVKPDSFTLVSVIPALA 374
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 6/206 (2%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
AL F + G P TF+ +LK CA AVH+ +A G + + + A AL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ----PDSA 315
YA+C + +++VFD+M D V+WN+++ YA +G A+ A+++ M + PDS
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T VS+L AC++A + + H+ G+ ++ ++D + G I A +
Sbjct: 163 TLVSVLPACANARALAACREA-HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLA 401
MP + +SV W+ ++ ++G++R A
Sbjct: 222 MPTK-NSVSWNAMIDGYAQNGDSREA 246
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
QD++V LI+MYAK G ++ AR LF+ +R+V++W A+I GY HG + LF +
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEM 455
Query: 100 LQY-FFPNEFSLASVLISCDYLHGKLVH-------ALALKFSLDAHVYVANALINMYSKS 151
PNE + SVL +C H LV ++ + L+ + ++++ ++
Sbjct: 456 KSIGIVPNETTFLSVLSACS--HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRA 513
Query: 152 CA-DEAWKVFENMEFRNVIS-WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
DEAW + M +S + +M+ ACKL + +EL EE A +F +
Sbjct: 514 GKLDEAWAFIQKMPMDPGLSVYGAMLG---ACKLH-KNVEL-----AEESAQKIFELGPQ 564
Query: 210 EGM 212
EG+
Sbjct: 565 EGV 567
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/599 (36%), Positives = 342/599 (57%), Gaps = 38/599 (6%)
Query: 4 STQIYATLFHACALHGNIKQ---AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ YAT+ CA NIKQ A QLH ++ + + V L++ Y+K G L +
Sbjct: 305 TQSTYATVIKLCA---NIKQLGLARQLHSSVLKRGFHSYGN--VMTALMDAYSKAGQLGN 359
Query: 61 ARHLFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCD 118
A +F M +NVVSWTA+I+G Q+G+ LF + + PN+F+ +++L +
Sbjct: 360 ALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASV 419
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
+HA +K + + V AL+ YSK C +EA +F+ ++ ++V+SW++M+
Sbjct: 420 ASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTC 479
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA----GLVTER 233
+ A+ + + A +F ++ G+ P+ T S V+ ACA G+ R
Sbjct: 480 Y-------------AQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGR 526
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
H++ K+ D +++AL+ YAR GSI ++ +F++ T DLVSWNS+L YA
Sbjct: 527 Q---FHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYA 583
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG +++AL +F M ++ D TF+S++ C+HAGLV+EG + F SM ++G+ P +
Sbjct: 584 QHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTM 643
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HYACMVDL R G++ EA LI M ++W LLG+C+ H L +LAA KL
Sbjct: 644 EHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLS 703
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP DS +V +SNIY +G + + +RK M +V+K G SWI+I+N+VH F + K
Sbjct: 704 LEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDK 763
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP E I+ KL + +LK GY P+TS ALH++ EE KE L HSE+LAL F ++
Sbjct: 764 SHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIAT 823
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + I KN+R+C DCH +K+ S + +EIV+RD +RFHHF +CSC D+W
Sbjct: 824 ----PPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 187/370 (50%), Gaps = 33/370 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V L++MY K+ + D R +F+ MPKRNVV+WT+L++GY Q G + LF +
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197
Query: 100 LQYFFPNEFSLASVL--ISCDYL--HGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ +PN + ASVL ++ + G+ VHA ++KF + V+V N+L+NMY+K +
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA VF ME R+++SWN+++A + +A++LF + ++ + Q
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLF---HDSRSSITMLTQ-------- 306
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T++ V+K CA + A +HS + K GF + AL+ AY++ G + + +F
Sbjct: 307 --STYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIF 364
Query: 275 DKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
M+ ++VSW +++ +G A LFS M V P+ T+ ++L+A +
Sbjct: 365 LLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPP 424
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL--IREMPMEPDSVIWSVL 388
Q +V + E +V LL ++ E+ I +M + D V WS +
Sbjct: 425 QIHAQVIKTNYECTSIVG--------TALLASYSKLCNTEEALSIFKMIDQKDVVSWSAM 476
Query: 389 LGSCRKHGET 398
L + G++
Sbjct: 477 LTCYAQAGDS 486
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 169/372 (45%), Gaps = 37/372 (9%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP--NEFSLASVLISC- 117
AR FDE+P RN + + +A+ G+ + F + + +L VL C
Sbjct: 57 ARQAFDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 118 ---DYLHGKLVHALALKFSLD-AHVYVANALINMYSK--SCADEAWKVFENMEFRNVISW 171
D + GK +H L ++ D V V +L++MY K S D KVFE M RNV++W
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVD-GRKVFEAMPKRNVVTW 173
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
S++ + + +ELF +M+ EG+ P+ TF+ VL A
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMR-------------AEGVWPNSVTFASVLSVVASQGM 220
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
VH+ K+G + N+L++ YA+CG + ++ VF M D+VSWN+++
Sbjct: 221 VDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAG 280
Query: 292 YALHGQAKEALQLFSN------MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
L+G EALQLF + M Q AT + L + GL ++ HS + G
Sbjct: 281 LVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQ----LHSSVLKRG 336
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ ++D + G++ A + M + V W+ ++ C ++G+ LA
Sbjct: 337 FHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALF 396
Query: 406 TKLKQ--LEPGD 415
+++++ + P D
Sbjct: 397 SRMREDGVAPND 408
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/603 (36%), Positives = 341/603 (56%), Gaps = 46/603 (7%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHE-------HMINNFPNEPQDLFVTNHLINMYAKFG 56
+ YAT+ CA + A QLH H+ N V L + Y+K G
Sbjct: 301 TQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGN---------VMTALADAYSKCG 351
Query: 57 YLDDARHLFD-EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVL 114
L DA ++F RNVVSWTA+ISG Q+G+ LF + + PNEF+ +++L
Sbjct: 352 ELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML 411
Query: 115 ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
+ + +HA +K + +V AL+ YSK ++A +F+ +E ++V++W++
Sbjct: 412 KASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA----GL 229
M++ A+ + E A +LF ++ +G+ P+ T S V+ ACA G+
Sbjct: 472 MLSCH-------------AQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGV 518
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
R H++ KY + D +++AL+ Y+R G+I ++ VF++ T DLVSWNS++
Sbjct: 519 DQGRQ---FHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMI 575
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA HG + +A++ F M +Q D TF++++ C+H GLV EG + F SM+ +H +
Sbjct: 576 SGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKI 635
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
P ++HYACMVDL R G++ E LIR+MP +++W LLG+CR H L + +A
Sbjct: 636 NPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSAD 695
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
KL LEP DS +V +SNIY +G + + +RK M +V+K G SWI+I+N+VH F
Sbjct: 696 KLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFI 755
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
+ K HP + I+KKL+ +I +LK GY P TS LHDI E+ KE L HSE+LAL F
Sbjct: 756 AFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFG 815
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
++ + ++I+KN+R+C DCH MK+ S + +EI++RD +RFHHF CSC
Sbjct: 816 LIAT----PPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCG 871
Query: 587 DYW 589
D+W
Sbjct: 872 DFW 874
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 154/286 (53%), Gaps = 23/286 (8%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPN 106
L++MY K G + + +F+ MPK+NVV+WT+L++G A E LF + + +PN
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPN 200
Query: 107 EFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
F+ ASVL + G+ VHA ++KF + V+V N+L+NMY+K ++A VF
Sbjct: 201 PFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFN 260
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
ME R+++SWN+++A + + E +A++LF E + + Q T++
Sbjct: 261 WMETRDMVSWNTLMAGLQLNECELEALQLF-----HESRATMGKMTQS--------TYAT 307
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YH 280
V+K CA L A +HS + K+GF + AL AY++CG ++ + +F T
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
++VSW +I+ +G A+ LFS M V P+ T+ ++L A
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 169/365 (46%), Gaps = 33/365 (9%)
Query: 61 ARHLFDEMPKRNV-VSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC- 117
AR+ DE+P+R+ V ++ YA+ G E F + + +L+ VL +C
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 118 ---DYLHGKLVHALALKFSLD-AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISW 171
D + G+ +H L +K D V +L++MY K C E +VFE M +NV++W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMK-CGSVCEGIEVFEGMPKKNVVTW 169
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
S++ ++ ++ + LF +M+ E G+ P+ TF+ VL A A
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAE-------------GIWPNPFTFASVLSAVASQGA 216
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
VH+ K+G + N+L++ YA+CG + +K VF+ M D+VSWN+++
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276
Query: 292 YALHGQAKEALQLF----SNMN--VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
L+ EALQLF + M Q AT + L + L ++ HS + HG
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQ----LHSCVLKHG 332
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ + D + G + +A + + V W+ ++ C ++G+ LA +
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 406 TKLKQ 410
+++++
Sbjct: 393 SRMRE 397
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 193/400 (48%), Gaps = 32/400 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ A A G + ++H + F +FV N L+NMYAK G ++DA+ +F+
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVK-FGCR-SSVFVCNSLMNMYAKCGLVEDAKSVFNW 261
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----G 122
M R++VSW L++G + E +LF S + + A+V+ C L
Sbjct: 262 METRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALA 321
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFE-NMEFRNVISWNSMIAAFR 179
+ +H+ LK V AL + YSK C + +A +F RNV+SW ++I+
Sbjct: 322 RQLHSCVLKHGFHLTGNVMTALADAYSK-CGELADALNIFSMTTGSRNVVSWTAIISGC- 379
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
++ I L A+ LF +++ + + P+ T+S +LKA ++ + +H
Sbjct: 380 ---IQNGDIPL---------AVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQ----IH 423
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K ++ + AL+ +Y++ GS + +F + D+V+W+++L +A G +
Sbjct: 424 AQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483
Query: 300 EALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
A LF+ M +Q P+ T S++ AC+ + + FH++ + + + +
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSAL 543
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
V + R G I ++ +++ E + D V W+ ++ +HG
Sbjct: 544 VSMYSRKGNI-DSAQIVFERQTDRDLVSWNSMISGYAQHG 582
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/582 (36%), Positives = 318/582 (54%), Gaps = 52/582 (8%)
Query: 54 KFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-------YFFPN 106
+FG + AR LFD +P+ +V SW + GY++ + L+ +L+ Y +P
Sbjct: 60 EFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYP- 118
Query: 107 EFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEF 165
F S G+ +H +K+ LD++V+ NALINMYS D A +F+
Sbjct: 119 -FLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCK 177
Query: 166 RNVISWNSMIAAFRACKLEA-----------------QAIELFAKMKNEE---------- 198
+V++WN+MI+ + K + A + F KM +
Sbjct: 178 SDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDG 237
Query: 199 --------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
EAL LFR++Q + PD T VL ACA L + + I K ++D
Sbjct: 238 YLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKND 297
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
T + NALI Y +CG++ ++ +F+ + D +W +++ A++G +EAL +FS M
Sbjct: 298 TFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLK 357
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
+V PD T+V +LSAC+H G+V EG K F SM HG+ P + HY CMVDLLG+ G +
Sbjct: 358 ASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLK 417
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 427
EA ++I+ MPM+P+S++W LLG+CR H + +AE A ++ +LEP + +V NIY
Sbjct: 418 EAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYA 477
Query: 428 LSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIG 487
++K R +R+ M ++K PG S IE+ VHEF +G + HPQ + I+ KL ++
Sbjct: 478 ACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTS 537
Query: 488 QLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
LK GY P TS DI EE KE +Y HSEKLA+ F ++N G IRI+KN+R
Sbjct: 538 DLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGP----GVTIRIVKNLR 593
Query: 548 ICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+C+DCH+ KL S + +E++VRD RFHHF+ CSC DYW
Sbjct: 594 MCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 158/343 (46%), Gaps = 42/343 (12%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
MI+ + +D+ ++ + G +D AR F +MP+R+ VSWTA+I GY + +
Sbjct: 186 MISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYK 245
Query: 91 ECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALI 145
E LF + P+EF++ SVL +C L G+ + K + +V NALI
Sbjct: 246 EALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALI 305
Query: 146 NMYSKSCADE-AWKVFENMEFRNVISWNSMIA--AFRACKLEAQAIELFAKMKNEEEALF 202
+MY K E A +F + R+ +W +M+ A C EEAL
Sbjct: 306 DMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCG---------------EEALN 350
Query: 203 LFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
+F Q+ + + PD T+ VL AC G+V E S+ A++G E + ++
Sbjct: 351 MFSQMLKASVTPDEVTYVGVLSACTHTGMVDE-GKKFFASMTARHGIEPNIAHYGCMVDL 409
Query: 261 YARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSN-MNVQPDS-ATF 317
+ G + + ++ M + + W ++L A +H A+ A + + ++P++ A +
Sbjct: 410 LGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVY 469
Query: 318 V---SLLSACSHAGLVQEGNKVFH----------SMLENHGVV 347
V ++ +AC+ ++E +V S++E +G+V
Sbjct: 470 VLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIV 512
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G ++ + ++ N D FV N LI+MY K G ++ A +F+ +
Sbjct: 267 VSVLTACAQLGALELGEWIRTYIDKN--KVKNDTFVGNALIDMYFKCGNVEMALSIFNTL 324
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYL-----HG 122
P+R+ +WTA++ G A +G EE +F +L+ P+E + VL +C +
Sbjct: 325 PQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGK 384
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFR-NVISWNSMIAAFRA 180
K ++ + ++ ++ ++++ K+ EA ++ +NM + N I W +++ A R
Sbjct: 385 KFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRI 444
Query: 181 CK---LEAQAIELFAKMKNEEEALFLFR 205
K + +AIE +++ A+++ +
Sbjct: 445 HKDAEMAERAIEQILELEPNNGAVYVLQ 472
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/585 (36%), Positives = 331/585 (56%), Gaps = 28/585 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L A GN++ +H + + E D+ V+N L+ MY K G + D L++ M
Sbjct: 420 SLLSAATNTGNLQYGQSIHA-CVWKYGFET-DVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGKL 124
R+++SW A +SG G + +F +L+ F PN ++ S+L SC D +G+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537
Query: 125 VHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
VHA +K LD + +V ALI+MY+K ++A F + R++ +W +I +
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY----- 592
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
A+ E+AL FRQ+Q+EG+ P+ T + L C+ L + +HS++
Sbjct: 593 --------AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVF 644
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
K G D + +AL+ YA+CG + ++ +F+ + D ++WN+I+ YA +GQ +AL
Sbjct: 645 KSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALT 704
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F M + PD TF +LSACSH GLV+EG + F+SM + G+ P +DH ACMVD+L
Sbjct: 705 AFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDIL 764
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GRVG+ E E I++M + +++IW +LG+ + H L E AA KL +L+P + ++
Sbjct: 765 GRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYI 824
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SNI+ G ++ + +R M V+K PG SW+E +VH F S HPQ + I
Sbjct: 825 LLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHL 884
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
KL+EL +L + YVP+T LH++ E K+E L HSE+LAL FA+++ S I
Sbjct: 885 KLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSS----EKKI 940
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
RI KN+RIC DCH+ MK S + +EIVVRD RFHHFK+ CSC
Sbjct: 941 RIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 38/442 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
AT AC+L + Q+H DLFV + L+++YAK G ++ A +F M
Sbjct: 217 ATGLKACSLCMALDLGKQMHAQAFK--LGLLLDLFVGSALVDLYAKCGEIELASKMFIGM 274
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGK 123
P++N V+W L++GYAQ G+ +LFCS+++ NEF+L +VL C + G+
Sbjct: 275 PEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ 334
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
++H+L +K + + ++ L++MYSK A +A VF+ ++ +++ W+++I
Sbjct: 335 VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITC----- 389
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
L+ Q EE++ LF ++ P+ T +L A ++ ++H+ +
Sbjct: 390 LDQQG--------QSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACV 441
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
KYGFE D ++NAL+ Y + G + ++++ M DL+SWN+ L G L
Sbjct: 442 WKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPL 501
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD--HYAC-- 355
+F +M P+ TF+S+L +CS V G +V +++N QLD ++ C
Sbjct: 502 TIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKN-----QLDDNNFVCTA 556
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
++D+ + + +A+ + + D W+V++ + +T E A +Q++ +
Sbjct: 557 LIDMYAKCMYLEDADVAFNRLSVR-DLFTWTVII---TNYAQTNQGEKALNYFRQMQQ-E 611
Query: 416 SLGFVQMSNIYCLSGSFNKARL 437
+ + + CLSG + A L
Sbjct: 612 GVKPNEFTLAGCLSGCSSLASL 633
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 194/391 (49%), Gaps = 26/391 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+++ CA ++ A +H ++ + N L+V+ L+N+YAK Y AR + +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVS--LVNVYAKCRYSAYARLVLAK 172
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
MP R+VVSWTALI G G A + LF + + PNEF+LA+ L +C G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRAC 181
K +HA A K L ++V +AL+++Y+K E A K+F M +N ++WN ++
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNG---- 288
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+A+ + L LF + + + T + VLK CA + +HSL
Sbjct: 289 ---------YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K G+E + I L+ Y++CG + VF + D+V W++++ GQ++E+
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M + P+ T SLLSA ++ G +Q G + H+ + +G + +V
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI-HACVWKYGFETDVAVSNALVT 458
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ + G + + KL M ++ D + W+ L
Sbjct: 459 MYMKNGCVHDGTKLYESM-VDRDLISWNAYL 488
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 162/335 (48%), Gaps = 32/335 (9%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ + + ++ +C+ ++ Q+H H+I N ++ FV LI+MYAK YL+D
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN--FVCTALIDMYAKCMYLED 569
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
A F+ + R++ +WT +I+ YAQ E+ F + Q PNEF+LA L C
Sbjct: 570 ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
L G+ +H++ K + ++V +AL++MY+K C +EA +FE + R+ I+WN++
Sbjct: 630 LASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTI 689
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE 232
I +A+ +AL FR + EG++PD TF+ +L AC+ GLV E
Sbjct: 690 ICG-------------YAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV-E 735
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKA 291
+S+ +G ++ R G + KM + + W ++L A
Sbjct: 736 EGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGA 795
Query: 292 YALHGQ----AKEALQLFSNMNVQPDSATFVSLLS 322
+H K A +LF +QP+ + LLS
Sbjct: 796 SKMHNNLVLGEKAANKLFE---LQPEEESSYILLS 827
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 151/284 (53%), Gaps = 27/284 (9%)
Query: 123 KLVHALALK--FSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAF 178
K +H L +K + D+H++V+ L+N+Y+K C A+ V M R+V+SW ++I
Sbjct: 132 KAIHGLIVKDVINPDSHLWVS--LVNVYAK-CRYSAYARLVLAKMPDRDVVSWTALIQGL 188
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A E FA ++++LF+++Q EG+ P+ T + LKAC+ + +
Sbjct: 189 VA--------EGFAN-----DSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K G D + +AL+ YA+CG I L+ ++F M + V+WN +L YA G
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
L+LF +M +V+ + T ++L C+++ +++G +V HS++ G + C
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGN-EFIGC 353
Query: 356 -MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+VD+ + G ++A + + + +PD V+WS L+ + G++
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQS 396
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+S +L+ CA + A A+H LI K D+ + +L++ YA+C + ++ V KM
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+VSW ++++ G A +++ LF M + P+ T + L ACS + G K
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG-K 233
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
H+ G++ L + +VDL + G I A K+ MP E + V W+VLL +
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNGYAQR 292
Query: 396 GET 398
G+
Sbjct: 293 GDV 295
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/590 (36%), Positives = 341/590 (57%), Gaps = 30/590 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ A A GN MQ+H + + N + DL V N L++MYAKF + +FD+MP
Sbjct: 388 SIIAASARSGNTLHGMQIHAYAMKNGLD--SDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 445
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GKL 124
++VVSWT +I+G+AQ+G+ LF + L+ + ++S+L++C L K
Sbjct: 446 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 505
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H+ ++ L + + + N ++++Y + D A ++FE +EF++V+SW SMI+ + L
Sbjct: 506 IHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 564
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+A+ELF MK G+ PD + +L A A L + +H +
Sbjct: 565 ANEALELFHLMK-------------ETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 611
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ GF + +A+ L+ YARCG++ S+ VF+ + DLV W S++ AY +HG + A+
Sbjct: 612 RKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAID 671
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M ++ PD FV++L ACSH+GL+ EG + SM + + P +HYAC+VDLL
Sbjct: 672 LFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLL 731
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR + EA + ++ M +EP + +W LLG+C+ H L E+AA KL +++P + +V
Sbjct: 732 GRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYV 791
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SN+Y + +R MK S ++K PG SWIE+ N+VH F + K HPQ I+
Sbjct: 792 LVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYS 851
Query: 481 KLEELIGQL-KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
KL ++ +L K GYV +T LH+ +EE K + LY HSE+LA+ + ++ E +
Sbjct: 852 KLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTT----PEGAS 907
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+R+C DCHNF KL S +E+V+RD+NRFHHFK +CSC D W
Sbjct: 908 LRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/471 (29%), Positives = 235/471 (49%), Gaps = 39/471 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMI--NNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ Y+++ C + + Q+H HMI N N +F++ L+ MY K G L DA
Sbjct: 79 EAYSSVLELCGSKKALSEGQQVHAHMITSNALFN---SVFLSTRLVFMYGKCGCLVDAEK 135
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----D 118
LFD MP + + +W A+I Y +G L+ + P + + +L +C D
Sbjct: 136 LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKD 195
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENM-EFRNVISWNSMI 175
+G VH LA+K + V+VAN+++ MY+K C D A ++F+ M E +V+SWNSMI
Sbjct: 196 RRYGAEVHGLAIKEGYVSIVFVANSIVGMYTK-CNDLNGARQLFDRMPEKEDVVSWNSMI 254
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+A+ + Q+IE AL LF ++Q+ +AP+ TF L+AC +
Sbjct: 255 SAYSS---NGQSIE----------ALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 301
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H+ + K + + +ANALI YAR G + + +F M D +SWNS+L + +
Sbjct: 302 MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQN 361
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G EALQ + M +PD +S+++A + +G G ++ H+ +G+ L
Sbjct: 362 GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQI-HAYAMKNGLDSDLQV 420
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE-TRLAELAATKLKQL 411
+VD+ + + + + +MP + D V W+ ++ ++G +R EL + QL
Sbjct: 421 GNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAGHAQNGSHSRALEL--FREVQL 477
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
E G L + +S+I L+ S K KE+ +RK GLS + ++N +
Sbjct: 478 E-GIDLDVMMISSIL-LACSGLKLISSVKEIHSYIIRK--GLSDLVLQNGI 524
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/582 (35%), Positives = 329/582 (56%), Gaps = 36/582 (6%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G I+ A ++ + M E + + + N LI + ++DA+ LF M R+ ++WT
Sbjct: 195 GLIRDARRVFQEM------EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTT 248
Query: 79 LISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFS 133
+++G Q+G E +F + + ++++ S+L +C L GK +HA +
Sbjct: 249 MVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTW 308
Query: 134 LDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF--RACKLEAQAIEL 190
+ +V+V +AL++MYSK + A VF M RN+ISW +MI + AC
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC--------- 359
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
EEA+ F ++Q +G+ PD T V+ +CA L + + H L G
Sbjct: 360 ------SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
++NAL+ Y +CGSI + ++FD+M++HD VSW +++ YA G+AKE + LF M
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLV 473
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
++PD TF+ +LSACS AGLV++G F SM ++H +VP DHY CM+DL R GR
Sbjct: 474 NGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFK 533
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 427
EAE+ I++MP PD+ W+ LL SCR G + + AA L + +P + +V + +++
Sbjct: 534 EAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHA 593
Query: 428 LSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIG 487
G + + +R+ M+ +V+K PG SWI+ +N+VH F++ + HP I++KLE L
Sbjct: 594 AKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNS 653
Query: 488 QLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
++ GY P+ S LHD+ + K + HHSEKLA+ F ++ + IRI+KN+R
Sbjct: 654 KMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLI----FVPQEMPIRIVKNLR 709
Query: 548 ICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+CVDCHN K S + G++I+VRD+ RFH F D CSC D+W
Sbjct: 710 VCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 222/454 (48%), Gaps = 65/454 (14%)
Query: 8 YATLFHACALHGN---IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
YA + + A G ++ A +H ++ F P F+ NHL+ YAK G L AR +
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPP-TFLLNHLLTAYAKSGRLARARRV 70
Query: 65 FDEMP-------------------------------KRNVVSWTALISGYAQHGNAEECF 93
FDEMP +R+ VS+ ALI+G++ G+
Sbjct: 71 FDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSV 130
Query: 94 RLFCSLL--QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINM 147
+L+ +LL + P +L+++++ L G VH L+ A+ +V + L++M
Sbjct: 131 QLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDM 190
Query: 148 YSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE-------- 198
Y+K +A +VF+ ME + V+ +N++I CK+ A LF M + +
Sbjct: 191 YAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMV 250
Query: 199 ----------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
EAL +FR+++ EG+ D TF +L AC L +H+ I + +E
Sbjct: 251 TGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYE 310
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
D+ + +AL+ Y++C SI L++ VF +MT +++SW +++ Y + ++EA++ FS M
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
++PD T S++S+C++ ++EG + FH + G++ + +V L G+ G
Sbjct: 371 QMDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGS 429
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
I +A +L EM D V W+ L+ + G+ +
Sbjct: 430 IEDAHRLFDEMSFH-DQVSWTALVTGYAQFGKAK 462
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 335/594 (56%), Gaps = 35/594 (5%)
Query: 9 ATLFHACA-LHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A++ AC+ L G A Q+H + D FV+ LI++Y+K G +++A LF
Sbjct: 1040 ASVLRACSSLEGGYYLATQIHACAMK--AGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN 1097
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLISCDYL 120
++ SW A++ GY G+ + RL+ + Q N A L+
Sbjct: 1098 QDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLK-- 1155
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
GK +HA+ +K + ++V + +++MY K C + A +VF + + ++W +MI+
Sbjct: 1156 QGKQIHAVVVKRGFNLDLFVTSGVLDMYLK-CGEMESARRVFSEIPSPDDVAWTTMISG- 1213
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C Q EE ALF + Q++ + PD TF+ ++KAC+ L +
Sbjct: 1214 --CVENGQ----------EEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQI 1261
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ I K D + +L+ YA+CG+I ++ +F + + SWN+++ A HG A
Sbjct: 1262 HANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNA 1321
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
KEALQ F M V PD TF+ +LSACSH+GLV E + F+SM +N+G+ P+++HY+C
Sbjct: 1322 KEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSC 1381
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VD L R GRI EAEK+I MP E + ++ LL +CR + + A KL LEP D
Sbjct: 1382 LVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSD 1441
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S +V +SN+Y + + R M+ V+K PG SW++++N+VH F +G + H +
Sbjct: 1442 SAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEET 1501
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+ K+E ++ +++ GYVP+T AL D+EEE KE LY+HSEKLA+ + +M
Sbjct: 1502 DVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMK----TP 1557
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R++KN+R+C DCH+ +K S + +EIV+RD+NRFHHF++ ICSC DYW
Sbjct: 1558 PSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 169/371 (45%), Gaps = 60/371 (16%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGN-AEECFRLFC 97
D FVTN+LI MYAK G L AR LFD P R++V+W A++S A H + + + F LF
Sbjct: 690 DRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFR 749
Query: 98 SLLQYFF-PNEFSLASV----LISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-S 151
L + +LA V L+S + +H A+K L V+VA AL+N+Y+K
Sbjct: 750 LLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFG 809
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
EA +F+ M R+V+ WN M+ A+ LE EA+ LF + R G
Sbjct: 810 LIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEY-------------EAMLLFSEFHRTG 856
Query: 212 MAPDWC---TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
PD T S V+K ++ + A + + + ++DD GS
Sbjct: 857 FRPDDVTLRTLSRVVKCKKNILELKQFKAYATKL--FMYDDD--------------GS-- 898
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
D++ WN L + G+A EA+ F +M V D TFV +L+ +
Sbjct: 899 ------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVA 946
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
++ G ++ H ++ G+ + C++++ + G + A + +M E D + W
Sbjct: 947 GLNCLELGKQI-HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMN-EVDLISW 1004
Query: 386 SVLLGSCRKHG 396
+ ++ C G
Sbjct: 1005 NTMISGCTLSG 1015
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 166/378 (43%), Gaps = 61/378 (16%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A +F C L + + LH + + D+FV L+N+YAKFG + +AR LFD M
Sbjct: 764 APVFKMCLLSASPSASESLHGYAVK--IGLQWDVFVAGALVNIYAKFGLIREARVLFDGM 821
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASV--LISC--DYLHGK 123
R+VV W ++ Y E LF + F P++ +L ++ ++ C + L K
Sbjct: 822 AVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELK 881
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
A A K + MY +D VI WN ++ F
Sbjct: 882 QFKAYATK-------------LFMYDDDGSD-------------VIVWNKALSRFLQRGE 915
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+A++ F M N +A D TF ++L AGL +H ++
Sbjct: 916 AWEAVDCFVDMINSR-------------VACDGLTFVVMLTVVAGLNCLELGKQIHGIVM 962
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G + + N LI+ Y + GS+S ++ VF +M DL+SWN+++ L G + ++
Sbjct: 963 RSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVG 1022
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGN----KVFHSMLENHGVVPQLDHY--A 354
+F ++ ++ PD T S+L ACS EG H+ GVV LD +
Sbjct: 1023 MFVHLLRDSLLPDQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVV--LDSFVST 1076
Query: 355 CMVDLLGRVGRILEAEKL 372
++D+ + G++ EAE L
Sbjct: 1077 ALIDVYSKRGKMEEAEFL 1094
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 100 LQYFFPNEFS-LASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAW 157
L + P FS L + + D GK HA L +V N LI MY+K + A
Sbjct: 652 LIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSAR 711
Query: 158 KVFENME--FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
K+F+ R++++WN++++A L A + LFR L+R ++
Sbjct: 712 KLFDTTPDTNRDLVTWNAILSA------------LAAHADKSHDGFHLFRLLRRSVVSTT 759
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T + V K C + + ++H K G + D +A AL++ YA+ G I ++ +FD
Sbjct: 760 RHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFD 819
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSL 320
M D+V WN ++KAY EA+ LFS +PD T +L
Sbjct: 820 GMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL 867
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ATL AC+L ++Q Q+H +++ N D FV L++MYAK G ++DAR LF
Sbjct: 1242 FATLVKACSLLTALEQGRQIHANIVK--LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKR 1299
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLV- 125
R + SW A+I G AQHGNA+E + F + + P+ + VL +C H LV
Sbjct: 1300 TNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACS--HSGLVS 1357
Query: 126 ------HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF 178
+++ + ++ + + L++ S++ +EA KV +M F S +
Sbjct: 1358 EAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTL--L 1415
Query: 179 RACKLE 184
AC+++
Sbjct: 1416 NACRVQ 1421
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/637 (36%), Positives = 339/637 (53%), Gaps = 75/637 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ AC + Q ++H + I N D+FV N LI+ YAK G +++A +F+ M
Sbjct: 126 ILPACGSLKAVPQTKEVHGNAIRN--GTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 183
Query: 71 RNVVSWTALISGYAQHGNAEECFRLF--------------------------CS------ 98
++VVSW A+++GY+Q GN + F LF CS
Sbjct: 184 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 243
Query: 99 LLQYFF----PNEFSLASVLISCDYL----HGKLVHALALKFSL----------DAHVYV 140
Q F PN ++ SVL +C L G +HA +LK L D + V
Sbjct: 244 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMV 303
Query: 141 ANALINMYSKSCADEAWK-VFEN--MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
NALI+MYSK + +A + +F++ +E RNV++W MI A++LF +M +E
Sbjct: 304 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 363
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV--IAN 255
G+AP+ T S +L ACA L R +H+ + ++ D + +AN
Sbjct: 364 PY-----------GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVAN 412
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
LI+ Y++CG + ++ VFD M+ +SW S++ Y +HG+ EAL +F M P
Sbjct: 413 CLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVP 472
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D TF+ +L ACSH G+V +G F SM ++G+ P+ +HYA +DLL R GR+ +A K
Sbjct: 473 DDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKT 532
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
+++MPMEP +V+W LL +CR H LAE A KL ++ + + +SNIY +G +
Sbjct: 533 VKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 592
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
IR MK S ++K PG SW++ + F G + HP I+ LE LI ++K M
Sbjct: 593 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAM 652
Query: 493 GYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDC 552
GYVPET+ ALHD++EE K L HSEKLAL + ++ C IRI KN+R+C DC
Sbjct: 653 GYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCP----IRITKNLRVCGDC 708
Query: 553 HNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
H+ S ++ EIVVRD +RFHHFK+ CSC YW
Sbjct: 709 HSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 201/417 (48%), Gaps = 64/417 (15%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKR---NVVSWTALISGYAQHGNAEECFRLF 96
++F+ N L+ MY++ G L++A +FDE+ +R +V+SW +++S + + NA LF
Sbjct: 43 SNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLF 102
Query: 97 C--SLLQYFFPNE-----FSLASVLISCDYLHG----KLVHALALKFSLDAHVYVANALI 145
+L+ + P S+ ++L +C L K VH A++ V+V NALI
Sbjct: 103 SKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALI 162
Query: 146 NMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------ 198
+ Y+K + A KVF MEF++V+SWN+M+A + A ELF M+ E
Sbjct: 163 DAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMV 222
Query: 199 ----------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH--- 239
EAL +FRQ+ G P+ T VL ACA L +H
Sbjct: 223 TWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYS 282
Query: 240 ------SLIAKYGFED-DTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILK 290
+L +G ED D ++ NALI Y++C S ++ +FD + ++V+W ++
Sbjct: 283 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 342
Query: 291 AYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+A +G + +AL+LF M V P++ T +L AC+H ++ G ++ +L +H
Sbjct: 343 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH- 401
Query: 346 VVPQLDHYA-----CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
Q D A C++++ + G + A + M + ++ W+ ++ HG
Sbjct: 402 ---QYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGR 454
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 184/359 (51%), Gaps = 45/359 (12%)
Query: 10 TLFHACALHGNIKQAMQLHEHMI--------NNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
++ ACA G Q M++H + + N+F E +DL V N LI+MY+K A
Sbjct: 261 SVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 320
Query: 62 RHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF---PNEFSLASVLIS 116
R +FD++P +RNVV+WT +I G+AQ+G++ + +LF ++ + PN ++++ +L++
Sbjct: 321 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 380
Query: 117 CDYLH----GKLVHALALK-FSLDAHVY-VANALINMYSKSCA--DEAWKVFENMEFRNV 168
C +L GK +HA L+ D+ Y VAN LINMYSK C D A VF++M ++
Sbjct: 381 CAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK-CGDVDTARHVFDSMSQKSA 439
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA- 227
ISW SM+ + ++A+++F KM+ + G PD TF +VL AC+
Sbjct: 440 ISWTSMMTGYGMHGRGSEALDIFDKMR-------------KAGFVPDDITFLVVLYACSH 486
Query: 228 -GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS-KQVFDKMTYHDLVSW 285
G+V ++ S S+ A YG I AR G + + K V D V W
Sbjct: 487 CGMV-DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVW 545
Query: 286 NSILKAYALHGQ---AKEALQLFSNMNVQPD-SATFVSLLSACSHAGLVQEGNKVFHSM 340
++L A +H A+ AL MN + D S T +S + A AG ++ ++ H M
Sbjct: 546 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYAT--AGRWKDVARIRHLM 602
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 158/352 (44%), Gaps = 63/352 (17%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVF 160
+ F+L VL +C Y G H L +++V++ NAL+ MYS+ + +EA +F
Sbjct: 9 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68
Query: 161 ENMEFR---NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+ + R +VISWNS+++A A++LF+KM L + + E D
Sbjct: 69 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM-----TLIVHEKPTNE--RSDII 121
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+ +L AC L VH + G D + NALI AYA+CG + + +VF+ M
Sbjct: 122 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMM 181
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ-------------------------- 311
+ D+VSWN+++ Y+ G K A +LF NM +
Sbjct: 182 EFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEAL 241
Query: 312 ------------PDSATFVSLLSACSHAGLVQEGNKVFHSMLEN---------HGVVPQL 350
P+ T +S+LSAC+ G +G ++ L+N G L
Sbjct: 242 NVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDL 301
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRKHGETRLA 401
Y ++D+ + A + ++P+E +V+ W+V++G ++G++ A
Sbjct: 302 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 353
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 15/249 (6%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+ R G D T VLKAC L + R SA H LI GFE + I NAL+ Y+RCGS
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 267 ISLSKQVFDKMTYH---DLVSWNSILKAYALHGQAKEALQLFSNM---------NVQPDS 314
+ + +FD++T D++SWNSI+ A+ A AL LFS M N + D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
+ V++L AC V + +V + + N G + ++D + G + A K+
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRN-GTFLDVFVGNALIDAYAKCGLMENAVKVFN 179
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
M + D V W+ ++ + G + A EL K+ P D + + + Y G +
Sbjct: 180 MMEFK-DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238
Query: 434 KARLIRKEM 442
+A + ++M
Sbjct: 239 EALNVFRQM 247
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/592 (36%), Positives = 333/592 (56%), Gaps = 43/592 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G Q+H ++ +++V++ LI+MYAK G LD A +F
Sbjct: 441 YPSILKTCTTLGATDLGEQIHTQVLKT--GFQFNVYVSSVLIDMYAKHGKLDHALKIFRR 498
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
+ + +VVSWTA+I+GY QH E LF + Q + AS + +C + G
Sbjct: 499 LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 558
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA + + + NAL+++Y++ C EA+ F+ + ++ +SWNS+++ F
Sbjct: 559 RQIHAQSCLSGYSDDLSIGNALVSLYAR-CGKVREAYAAFDQIYAKDNVSWNSLVSGF-- 615
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ EEAL +F Q+ + G+ + TF + A A + R +H
Sbjct: 616 -----------AQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHG 664
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+I K G++ +T ++NALI YA+CG+I D +SWNS++ Y+ HG E
Sbjct: 665 MIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCGFE 711
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+LF +M +V P+ TFV +LSACSH GLV EG F SM E H +VP+ +HYAC+V
Sbjct: 712 ALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVV 771
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR G + A++ + EMP++PD+++W LL +C H + E AA+ L +LEP DS
Sbjct: 772 DLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSA 831
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SN+Y +SG ++ R+ MK V+K PG SW+E++N VH F +G + HP+ +
Sbjct: 832 TYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADM 891
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++ L L + GYVP + L D E K+ HSE+LA+ F +++ S
Sbjct: 892 IYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTS----S 947
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + + KN+R+C DCHN++K S + + I+VRDS RFHHFK CSC DYW
Sbjct: 948 TPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 194/424 (45%), Gaps = 55/424 (12%)
Query: 6 QIYATLFHACALHG-NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+I+A + C+ + + + Q+H I + F+ N LI++Y K G+L A+ +
Sbjct: 164 RIFAVVLRGCSGNAVSFRFVEQIHAKTITS--GFESSTFICNPLIDLYFKNGFLSSAKKV 221
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH--- 121
F+ + R+ VSW A+ISG +Q+G EE LFC + VL +C +
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI-------------VLSACTKVEFFE 268
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
GK +H L LK + YV NAL+ +YS+S A ++F M R+ +S+NS+I+
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISG-- 326
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+ AL LF+++ + PD T + +L ACA + + H
Sbjct: 327 -----------LAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFH 375
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S K G D V+ +L+ Y +C I + + F + Y L + N
Sbjct: 376 SYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF--LCYGQLDNLN------------- 420
Query: 300 EALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
++ Q+F+ M ++ P+ T+ S+L C+ G G ++ H+ + G + + +
Sbjct: 421 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQI-HTQVLKTGFQFNVYVSSVL 479
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE-TRLAELAATKLKQLEPGD 415
+D+ + G++ A K+ R + E D V W+ ++ +H + T L Q D
Sbjct: 480 IDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSD 538
Query: 416 SLGF 419
++GF
Sbjct: 539 NIGF 542
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 238/529 (44%), Gaps = 86/529 (16%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH---GNAEECFRLFCSLLQYFF 104
LI+ Y FG L+ A ++FDEMP R++ W + + + G FR + F
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF- 161
Query: 105 PNEFSLASVLISCD-----YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWK 158
+E A VL C + + +HA + ++ ++ N LI++Y K+ A K
Sbjct: 162 -DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKK 220
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
VFEN++ R+ +SW +MI+ ++ EEEA+ LF Q
Sbjct: 221 VFENLKARDSVSWVAMISGL-------------SQNGYEEEAMLLFCQ------------ 255
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
IVL AC + +H L+ K GF +T + NAL+ Y+R G++S ++Q+F M+
Sbjct: 256 --IVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMS 313
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNK 335
D VS+NS++ A G AL LF MN+ +PD T SLLSAC+ G + G K
Sbjct: 314 QRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG-K 372
Query: 336 VFHSMLENHGVVPQLDHYACMVDL----------------LGRVGRILEAEKLIREMPME 379
FHS G+ + ++DL G++ + ++ ++ +M +E
Sbjct: 373 QFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIE 432
Query: 380 ---PDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS---NIYCLSGSFN 433
P+ + +L +C G T L E T++ L+ G S ++Y G +
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQV--LKTGFQFNVYVSSVLIDMYAKHGKLD 490
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ-REA--IFKKLEELIGQLK 490
A I + +K + V +SW + +G +H + EA +FK++++ +
Sbjct: 491 HALKIFRRLKENDV-----VSWTAM-------IAGYTQHDKFTEALNLFKEMQDQGIKSD 538
Query: 491 GMGYVPETSL-----ALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+G+ S AL + H + L +S+ L++ A+++ + C
Sbjct: 539 NIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARC 587
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 175/364 (48%), Gaps = 37/364 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
+ +V N L+ +Y++ G L A +F M +R+ VS+ +LISG AQ G LF +
Sbjct: 285 ETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMN 344
Query: 100 LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
L P+ ++AS+L +C + +GK H+ A+K + + + V +L+++Y K C+D
Sbjct: 345 LDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVK-CSD- 402
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
K + + ++ N ++ +F Q+Q EG+ P+
Sbjct: 403 -------------------------IKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPN 437
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T+ +LK C L +H+ + K GF+ + +++ LI YA+ G + + ++F
Sbjct: 438 QFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFR 497
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
++ +D+VSW +++ Y H + EAL LF M ++ D+ F S +SAC+ + +
Sbjct: 498 RLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQ 557
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G ++ H+ G L +V L R G++ EA ++ D+V W+ L+
Sbjct: 558 GRQI-HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI-YAKDNVSWNSLVSGF 615
Query: 393 RKHG 396
+ G
Sbjct: 616 AQSG 619
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/593 (37%), Positives = 337/593 (56%), Gaps = 35/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L AC N+ +LH ++ +F+ NH++ MY K G ++D F
Sbjct: 36 YLDLLLACGRSKNLGNGRRLHARIVAT--GHQDVMFLANHILIMYGKCGGMEDLSRAFSG 93
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVL--ISCDYLH--G 122
M +RN+VSW A+IS YAQ+ + + +F LL P+ + SVL + LH
Sbjct: 94 MKRRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWA 153
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
KLVH LAL+ +H VA AL+NMYSK D A +VF+ + ++V+SW++MIAA+
Sbjct: 154 KLVHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAY--- 210
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ + EAL +F ++ EG+ + TF V+ AC + A +H
Sbjct: 211 ----------AQTGHGTEALEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCR 260
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I + G E +TV+ AL++ Y +CG ++ +K++FDK+ D+V W++IL+AYA HG + A
Sbjct: 261 IIEAGLESNTVLGTALLNMYGKCGGLAEAKKIFDKLAERDVVVWSAILEAYARHGHPRVA 320
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+LF+ M V+P+ TFV +L AC H G V EG F S++ +H + P H CM+D
Sbjct: 321 LKLFTLMQQEGVRPNDVTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLD 380
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+LGR G++ EAE I MP++ +++ WS+ LGSCR +G+ + AA K+ + P G
Sbjct: 381 MLGRAGKLEEAESFIARMPVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAG 440
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ ++++Y +G +A + + M+ +K PG S I + RVHEF + HPQ + I
Sbjct: 441 YLTLASMYTDAGMPEEAEAVARLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEI 500
Query: 479 FKKLEELIGQLKGMGYVPET-SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ L+EL + +GYVP+T L L +E + HSE+LAL F M+ +
Sbjct: 501 YSYLDELHARALELGYVPDTRPLLLGSVERK-------LHSERLALAFGAMSVPG--KRN 551
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLL-GKEIVVRDSNRFHHFKDRICSCNDYW 589
S I I+KN+R+C DCH F K S + G+EI+VRD++RFH FKD +CSC DYW
Sbjct: 552 SPIHIIKNLRVCRDCHEFTKFVSRTMEGREIIVRDTSRFHLFKDGVCSCGDYW 604
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/593 (34%), Positives = 342/593 (57%), Gaps = 33/593 (5%)
Query: 9 ATLFHACA-LHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A++ AC+ L + + Q+H H + D FV LI++Y+K G +++A LF
Sbjct: 1009 ASVLRACSSLIDGLNISRQIHVHALKT--GNIADSFVATTLIDVYSKSGKMEEAEFLFQN 1066
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYL----H 121
++ W A++ GY + ++ LF SL+ ++ +LA+ +C L
Sbjct: 1067 KDDLDLACWNAMMFGYIIGNDGKKALELF-SLIHKSGEKSDQITLATAAKACGCLVLLDQ 1125
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
GK +HA A+K D+ ++V + +++MY K C D A VF + + ++W SMI+
Sbjct: 1126 GKQIHAHAIKAGFDSDLHVNSGILDMYIK-CGDMVNAGIVFNYISAPDDVAWTSMISG-- 1182
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C NE++AL ++ ++++ + PD TF+ ++KA + + +H
Sbjct: 1183 -C----------VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH 1231
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K D + +L+ YA+CG+I + ++F KM ++ WN++L A HG A+
Sbjct: 1232 ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAE 1291
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ LF +M ++PD +F+ +LSACSHAGL E + HSM ++G+ P+++HY+C+
Sbjct: 1292 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCL 1351
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VD LGR G + EA+K+I MP + + I LLG+CR G+ + A +L LEP DS
Sbjct: 1352 VDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDS 1411
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SNIY + ++ RK MK V+K PG SWI+++N +H F + HPQ +
Sbjct: 1412 AAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQAD 1471
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ K+EE++ ++ GYVP+T L D+E+E KE LY+HSEKLA+ + +++ +
Sbjct: 1472 IIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPA---- 1527
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+R+C DCHN +K S + +EIV+RD+NRFHHF+D +CSC DYW
Sbjct: 1528 STTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 198/400 (49%), Gaps = 40/400 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V N L+NMY+K G AR +F++M +++SW ++IS AQ EE LF LL
Sbjct: 938 DVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLL 997
Query: 101 -QYFFPNEFSLASVLISCDYLHGKL-----VHALALKFSLDAHVYVANALINMYSKSCA- 153
+ P+ F+LASVL +C L L +H ALK A +VA LI++YSKS
Sbjct: 998 HEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKM 1057
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+EA +F+N + ++ WN+M+ + +A+ELF+ + + G
Sbjct: 1058 EEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFS-------------LIHKSGEK 1104
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D T + KAC LV +H+ K GF+ D + + ++ Y +CG + + V
Sbjct: 1105 SDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIV 1164
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F+ ++ D V+W S++ +G +AL+++ M V PD TF +L+ A S +
Sbjct: 1165 FNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTAL 1224
Query: 331 QEGNKVFHSMLENHGVVPQLDHYA------CMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
++G ++ H V +LD + +VD+ + G I +A +L ++M + + +
Sbjct: 1225 EQGRQL-------HANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIAL 1276
Query: 385 WSVLLGSCRKHG--ETRLAELAATKLKQLEPGDSLGFVQM 422
W+ +L +HG E + + K +EP D + F+ +
Sbjct: 1277 WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP-DRVSFIGI 1315
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 165/364 (45%), Gaps = 60/364 (16%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV+ L+N+Y+K G + DAR LFD M +R+VV W ++ GY Q G +E F+LF
Sbjct: 761 DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 820
Query: 101 QYFF-PNEFSLASVL---ISCDYLHGKL----VHALALKFSLDAHVYVANALINMYSKSC 152
+ P+EFS+ +L ++ GK V A A K SL
Sbjct: 821 RSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSL------------------ 862
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+D+ VF WN ++ AIE F M G+
Sbjct: 863 SDDNPDVF---------CWNKKLSECLWAGDNWGAIECFVNMN---------------GL 898
Query: 213 APDW--CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
D+ T +VL A AG VH + K G + D +AN+L++ Y++ G +
Sbjct: 899 NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA 958
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
++VF+ M + DL+SWNS++ + A +E++ LF ++ ++PD T S+L ACS
Sbjct: 959 REVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS-- 1016
Query: 328 GLVQEGN--KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
L+ N + H G + ++D+ + G++ EAE L + + D W
Sbjct: 1017 SLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKD-DLDLACW 1075
Query: 386 SVLL 389
+ ++
Sbjct: 1076 NAMM 1079
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 173/369 (46%), Gaps = 60/369 (16%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYA-----QHGNAEECFRL 95
D F++N+L+ MY+K G L AR +FD P+R++V+W A++ YA GNA+E L
Sbjct: 655 DHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL 714
Query: 96 FCSLLQYFF--PNEFSLASVLISCDYLHGKL-----VHALALKFSLDAHVYVANALINMY 148
F LL+ +LA VL C G L VH A+K L+ V+V+ AL+N+Y
Sbjct: 715 F-RLLRASLGSTTRMTLAPVLKLC-LNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIY 772
Query: 149 SKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
SK C +A +F+ M R+V+ WN M+ + LE +A +LF+ +
Sbjct: 773 SK-CGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS-------------E 818
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
R G+ PD + ++L +++ +++ +A+ + AYA
Sbjct: 819 FHRSGLRPDEFSVQLILNG----------------VSEVNWDEGKWLADQ-VQAYA--AK 859
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+SLS D+ WN L G A++ F NM N+ D+ T + +L+A
Sbjct: 860 LSLSDD------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAA 913
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
+ ++ G +V H + G+ + +V++ ++G A ++ +M D +
Sbjct: 914 VAGTDDLELGKQV-HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLDLI 971
Query: 384 IWSVLLGSC 392
W+ ++ SC
Sbjct: 972 SWNSMISSC 980
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 110 LASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L + + + + L GK HA + +++N L+ MYSK + A +VF+ R++
Sbjct: 628 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 687
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
++WN+++ A+ A + + N +E L LFR L+ + T + VLK C
Sbjct: 688 VTWNAILGAY--------AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLN 739
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
A VH K G E D ++ AL++ Y++CG + ++ +FD M D+V WN +
Sbjct: 740 SGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMM 799
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
LK Y G KEA QLFS ++PD + +L+ S
Sbjct: 800 LKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS 839
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ATL A + ++Q QLH ++I + D FV L++MYAK G ++DA LF +
Sbjct: 1211 FATLIKASSCVTALEQGRQLHANVIK--LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK 1268
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKL-- 124
M RN+ W A++ G AQHGNAEE LF S+ + P+ S +L +C H L
Sbjct: 1269 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS--HAGLTS 1326
Query: 125 -----VHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAF 178
+H++ + ++ + + L++ ++ EA KV E M F+ S N A
Sbjct: 1327 EAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINR--ALL 1384
Query: 179 RACKLEAQ 186
AC+++
Sbjct: 1385 GACRIQGD 1392
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/591 (36%), Positives = 341/591 (57%), Gaps = 30/591 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+L AC GN+K +H +++ D+ V ++MY+K G ++ AR +F +M
Sbjct: 235 TSLIQACGGIGNLKLGKCMHGYVLG--LGLGNDILVLTSFVDMYSKMGDIESARWVFYKM 292
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFS-LASVLISCDYL----HGK 123
P RN+VSW A+ISG ++G E F LF L++ + + + S+L C GK
Sbjct: 293 PTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGK 352
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
++H A++ S ++++ ++ A++++YSK + +A VF M+ RNVI+W +M+
Sbjct: 353 ILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGL---- 407
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A+ + E+AL LF Q+Q EG+A + TF ++ +CA L + + ++H +
Sbjct: 408 ---------AQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHL 458
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKAYALHGQAKEA 301
+ GF D V AL+ YA+CG I+L++++F + D+V WNS++ Y +HG +A
Sbjct: 459 FRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQA 518
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ ++ M ++P+ TF+SLLSACSH+ LV++G +F+SM +H + P HYAC+VD
Sbjct: 519 VGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVD 578
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LL R GR EA+ LI +MP +P + + LL CR H L + KL L+ +
Sbjct: 579 LLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGI 638
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ +SNIY + ++K IR M+ ++K PG S +E N VH F +G HP E I
Sbjct: 639 YIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEI 698
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ LE L ++ GYVP+TS L D++EE K L+ HSE+LA+ F ++ + S
Sbjct: 699 YHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPA----GS 754
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+IRI KN+R+C DCH K S ++ +EI+VRD+NRFHHF + CSC DYW
Sbjct: 755 LIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 190/429 (44%), Gaps = 28/429 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ H +I N + D FV L+ Y+ L+ AR++FD+ + + A+
Sbjct: 44 NLIWVKSTHAQIITN--SLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAM 101
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFFPNE-----FSLASVLISCDYLHGKLVHALALKFSL 134
+ GY Q G E LF + + F+L + S DY G + + A++ +
Sbjct: 102 LCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGM 161
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+ + +V +++I+ K EA +VF+ M ++V+ WNS+I + ++A ++
Sbjct: 162 EKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGY----VQAGCFDV--- 214
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
A LF ++ G+ P T + +++AC G+ + +H + G +D ++
Sbjct: 215 ------AFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILV 268
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP- 312
+ + Y++ G I ++ VF KM +LVSWN+++ +G E+ LF +
Sbjct: 269 LTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSG 328
Query: 313 --DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
D T VSLL CS + G K+ H L +VDL + G + +A
Sbjct: 329 GFDLTTIVSLLQGCSQTASLATG-KILHG-CAIRSFESNLILSTAIVDLYSKCGSLKQAT 386
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLS 429
+ M + + + W+ +L ++G A L A ++ +S+ FV + +
Sbjct: 387 FVFNRMK-DRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHL 445
Query: 430 GSFNKARLI 438
GS + R I
Sbjct: 446 GSLKRGRSI 454
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +L H+CA G++K+ +H H+ D+ L++MYAK G ++ A +F
Sbjct: 435 FVSLVHSCAHLGSLKRGRSIHGHLFR--LGFAFDIVNMTALVDMYAKCGKINLAERIFSH 492
Query: 68 MP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV 125
++VV W ++I+GY HG+ + ++ +++ PN+ + S+L +C H +LV
Sbjct: 493 GSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACS--HSRLV 550
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 322/564 (57%), Gaps = 34/564 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV +MY+K G ++AR +FDEMP+RN+ +W A +S G ++ F
Sbjct: 141 SDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEF 200
Query: 100 L-QYFFPNEFSLASVLISC---DYLH-GKLVHALALKFSLDAHVYVANALINMYSK---- 150
+ + PN + + L +C YL G+ +H L+ +A V VAN LI+ Y K
Sbjct: 201 RHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQV 260
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
C++ +F + N +SW SMI ++ + EE+A +F + ++E
Sbjct: 261 GCSE---IIFSGISKPNDVSWCSMIVSY-------------VQNDEEEKACLVFLRARKE 304
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ P S VL ACAGL +VH+L K + + +AL+ Y +CGSI +
Sbjct: 305 GIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 364
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN-----VQPDSATFVSLLSACS 325
++ FD+M +LV+WN+++ YA GQA A+ LF M V P+ TFV +LSACS
Sbjct: 365 ERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACS 424
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
AG V G ++F SM +G+ P +HYAC+VDLLGR G + +A + I++MP+ P +W
Sbjct: 425 RAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVW 484
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG+ + G++ L ++AA L +L+P DS V +SN++ +G + +A L+RKEMK
Sbjct: 485 GALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDV 544
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
++K G SWI N VH F + H + I L +L G+++ GY+P+TS AL D+
Sbjct: 545 GIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDL 604
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
EEE K ++++HSEK+AL F +++ IRI KN+RIC DCH+ +K S ++G+
Sbjct: 605 EEEEKAMEVWYHSEKIALAFGLIS----IPAGVPIRITKNLRICGDCHSAIKFISGIVGR 660
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI+VRD+N FH F+D CSC DYW
Sbjct: 661 EIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 218/440 (49%), Gaps = 35/440 (7%)
Query: 28 HEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG 87
H +I N P F+ NHL+NMY+K + A+ L P R+VV+WTALI+G Q+G
Sbjct: 29 HAQIIKTLDN-PLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNG 87
Query: 88 NAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVAN 142
F ++ + PN+F+ + L GK VHALA+K + V+V
Sbjct: 88 RFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGC 147
Query: 143 ALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEAL 201
+ +MYSK+ +EA K+F+ M RN+ +WN+ ++ LE + ++AL
Sbjct: 148 SAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLS---NSVLEGR----------YDDAL 194
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
F + + EG P+ TF L ACAG R +H + + GFE D +AN LI Y
Sbjct: 195 TAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFY 254
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFV 318
+C + S+ +F ++ + VSW S++ +Y + + ++A +F ++P
Sbjct: 255 GKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVS 314
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
S+LSAC+ +++ G V H++ VV + + +VD+ G+ G I +AE+ EMP
Sbjct: 315 SVLSACAGLSVLEVGKSV-HTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP- 372
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG------DSLGFVQMSNIYCLSGSF 432
E + V W+ ++G G+ A++A T ++ G + + FV + + +GS
Sbjct: 373 ERNLVTWNAMIGGYAHQGQ---ADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSV 429
Query: 433 NKARLIRKEMKGSRVRKYPG 452
N I + M+G R PG
Sbjct: 430 NVGMEIFESMRG-RYGIEPG 448
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 153/331 (46%), Gaps = 36/331 (10%)
Query: 100 LQYFFPNEFSLASVLIS-----CDYLHGKLVHALALKFSLDAHV--YVANALINMYSK-S 151
+ + PN SLAS++ S C L G+ HA +K +LD + ++ N L+NMYSK
Sbjct: 1 MPFLSPN--SLASLVESAVSTQCSRL-GRAAHAQIIK-TLDNPLPSFIYNHLVNMYSKLD 56
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQR 209
+ A + R+V++W ++IA ++N ALF F ++R
Sbjct: 57 RPNSAQLLLSLTPNRSVVTWTALIAG---------------SVQNGRFTSALFHFSNMRR 101
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ + P+ TF KA L + VH+L K G D + + Y++ G
Sbjct: 102 DSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEE 161
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++++FD+M ++ +WN+ L L G+ +AL F +P+ TF + L+AC+
Sbjct: 162 ARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAG 221
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
A ++ G ++ H + G + ++D G+ ++ +E + + +P+ V W
Sbjct: 222 ASYLRLGRQL-HGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS-KPNDVSWC 279
Query: 387 VLLGSCRKHGETRLAELAATKLKQ--LEPGD 415
++ S ++ E A L + ++ +EP D
Sbjct: 280 SMIVSYVQNDEEEKACLVFLRARKEGIEPTD 310
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 341/588 (57%), Gaps = 33/588 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +F G I +A +L++ M +D+ + ++I + G +D+AR +FDE
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMM------PVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
M +RNVV+WT +I+GY Q+ + +LF + + E S S+L+ L G++ A
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE---KTEVSWTSMLLGYT-LSGRIEDA 253
Query: 128 LALKFSLDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ +A NA+I + + +A +VF+ ME R+ +W MI A+ E
Sbjct: 254 EEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAY-----ER 308
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ EL EAL LF Q+Q++G+ P + + +L CA L + ++ VH+ + +
Sbjct: 309 KGFEL--------EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
F+DD +A+ L+ Y +CG + +K VFD+ + D++ WNSI+ YA HG +EAL++F
Sbjct: 361 QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIF 420
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M P+ T +++L+ACS+AG ++EG ++F SM V P ++HY+C VD+LGR
Sbjct: 421 HEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGR 480
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G++ +A +LI M ++PD+ +W LLG+C+ H LAE+AA KL + EP ++ +V +
Sbjct: 481 AGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLL 540
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG-KRHPQREAIFKK 481
S+I + ++RK M+ + V K+PG SWIE+ +VH F GG K HP++ I
Sbjct: 541 SSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMM 600
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
LE+ G L+ GY P+ S LHD++EE K + L HSE+LA+ + ++ E IR
Sbjct: 601 LEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLK----LPEGVPIR 656
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+MKN+R+C DCH +KL S + +EI++RD+NRFHHF + CSC DYW
Sbjct: 657 VMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 180/394 (45%), Gaps = 58/394 (14%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
+G K+A QL + M +++ N L++ Y K + +AR++F+ MP+RNVVSWT
Sbjct: 61 NGLPKEARQLFDEM------SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWT 114
Query: 78 ALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH 137
A++ GY Q G E LF + + NE S +V+ G++ A L +
Sbjct: 115 AMVKGYMQEGMVGEAESLFWRMPER---NEVSW-TVMFGGLIDDGRIDKARKLYDMMPVK 170
Query: 138 VYVANALINMYSKSC----ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
VA+ NM C DEA +F+ M RNV++W +MI +R A +LF
Sbjct: 171 DVVAST--NMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE----D 249
M + E W + ++ +G + + A+ FE
Sbjct: 229 MPEKTEV--------------SWTSM-LLGYTLSGRIED----------AEEFFEVMPMK 263
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ NA+I + G IS +++VFD M D +W ++KAY G EAL LF+ M
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH----YACMVDLLGR 362
V+P + +S+LS C+ +Q G +V H+ H V Q D + ++ + +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQV-HA----HLVRCQFDDDVYVASVLMTMYVK 378
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G +++A KL+ + D ++W+ ++ HG
Sbjct: 379 CGELVKA-KLVFDRFSSKDIIMWNSIISGYASHG 411
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 154/365 (42%), Gaps = 66/365 (18%)
Query: 49 INMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF 108
I+ ++ G +++AR FD + + + SW +++SGY +G +E +LF +E
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLF---------DEM 74
Query: 109 SLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNV 168
S +V+ + G Y+ N +I EA VFE M RNV
Sbjct: 75 SERNVVSWNGLVSG----------------YIKNRMIV--------EARNVFELMPERNV 110
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SW +M+ + + +A LF +M E +++++ G
Sbjct: 111 VSWTAMVKGYMQEGMVGEAESLFWRMPERNEV-----------------SWTVMF---GG 150
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
L+ + L + D V + +I R G + ++ +FD+M ++V+W ++
Sbjct: 151 LIDDGRIDKARKLYDMMPVK-DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209
Query: 289 LKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ Y + + A +LF M + ++ S+L + +G +++ + F V+P
Sbjct: 210 ITGYRQNNRVDVARKLFEVMP-EKTEVSWTSMLLGYTLSGRIEDAEEFFE-------VMP 261
Query: 349 QLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG-ETRLAELAA 405
AC M+ G VG I +A ++ M + D+ W ++ + + G E +L A
Sbjct: 262 MKPVIACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 406 TKLKQ 410
KQ
Sbjct: 321 QMQKQ 325
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 25/232 (10%)
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATF 317
I +R G I+ +++ FD + + + SWNSI+ Y +G KEA QLF M+ + + ++
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-ERNVVSW 82
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
L+S ++ E VF M E + V + MV + G + EAE L MP
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVV-----SWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNIYCLSGSFNKAR 436
E + V W+V+ G G A KL + P D + M C G ++AR
Sbjct: 138 -ERNEVSWTVMFGGLIDDGRID----KARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
LI EM+ V ++W + G R R + +KL E++ +
Sbjct: 193 LIFDEMRERNV-----VTWTTMIT--------GYRQNNRVDVARKLFEVMPE 231
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/596 (37%), Positives = 345/596 (57%), Gaps = 32/596 (5%)
Query: 4 STQIYATLFHACALHGNIKQ---AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
S Y+T+ CA N+KQ A QLH ++ + + D V +++ Y+K G LDD
Sbjct: 301 SQSTYSTVIKLCA---NLKQLALARQLHSCVLKHGFHS--DGNVMTAIMDAYSKCGELDD 355
Query: 61 ARHLFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCD 118
A ++F MP +NVVSWTA+I G Q+ + LF + + PNEF+ ++VL +
Sbjct: 356 AFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASI 415
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
+ +HA +K + V AL+ YSK +EA +F+ ++ ++V++W++M++
Sbjct: 416 PILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSC 475
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE-RHAS 236
+ ++ + + A +F ++ +GM P+ T S + ACA
Sbjct: 476 Y-------------SQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGR 522
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
H++ KY ++D + +AL+ YAR GSI ++ VF++ T DLVSWNS++ YA HG
Sbjct: 523 QFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHG 582
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+KEAL F M ++ D ATF++++ C+HAGLV+EG + F SM+ +H + P ++HY
Sbjct: 583 YSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHY 642
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+CMVDL R G++ E LI MP +++W LLG+CR H L +LAA KL LEP
Sbjct: 643 SCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEP 702
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
DS +V +SNIY +G + + +RK M +V+K G SWI+I+N+VH F + K HP
Sbjct: 703 DDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHP 762
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
E I+ KL+ + +LK GY P TS+ LHDI EE KE L HSE+LAL F ++
Sbjct: 763 LSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIAT--- 819
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ ++I+KN+R+C DCH MK+ S + +EI++RD +RFHHF CSC D+W
Sbjct: 820 -PPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 31/368 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
++ V L++MY K G ++D R +F+ MPKRNVV+WT+L++GY Q + LF +
Sbjct: 134 EVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMR 193
Query: 100 LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ +PN F+ SVL + G+ VHA ++KF + V+V N+LINMYSK +
Sbjct: 194 AEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVE 253
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA VF ME R+++SWN+++A + + +A++LF R MA
Sbjct: 254 EAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHD--------------SRASMAK 299
Query: 215 -DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
T+S V+K CA L A +HS + K+GF D + A++ AY++CG + + +
Sbjct: 300 LSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNI 359
Query: 274 FDKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
F M ++VSW +++ + A LFS M NV+P+ T+ ++L+A L
Sbjct: 360 FLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL 419
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
Q ++ + N+ P + ++ ++G EA + + M D V WS +L
Sbjct: 420 PQIHAQIIKT---NYQHAPSVG--TALLASYSKLGNTEEALSIFK-MIDHKDVVAWSAML 473
Query: 390 GSCRKHGE 397
+ G+
Sbjct: 474 SCYSQAGD 481
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 171/367 (46%), Gaps = 34/367 (9%)
Query: 61 ARHLFDEMPKRNVVSWTA----LISGYAQHGNAE-ECFRLFCSLLQYFFPNEFSLASVLI 115
AR D MP R+ + ++ I Y + G E F + + +++ VL
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVSRVLK 107
Query: 116 SC----DYLHGKLVHALALKFSLD-AHVYVANALINMYSKSCADEAWKV-FENMEFRNVI 169
C D + G+ +H L +K D A V V AL++MY K E +V FE M RNV+
Sbjct: 108 VCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVV 167
Query: 170 SWNSMIAAF---RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+W S++ + RAC + + LF +++ EG+ P+ TF+ VL A
Sbjct: 168 TWTSLLTGYVQGRAC----------------SDVMALFFRMRAEGVWPNPFTFTSVLSAV 211
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
A VH+ K+G + N+LI+ Y++CG + +K VF +M D+VSWN
Sbjct: 212 ASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWN 271
Query: 287 SILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
+++ L+ EALQLF + + +T+ +++ C++ + + HS +
Sbjct: 272 TLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQ-LHSCVLK 330
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL 403
HG + ++D + G + +A + MP + V W+ ++G C ++ + LA
Sbjct: 331 HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAA 390
Query: 404 AATKLKQ 410
+++++
Sbjct: 391 LFSRMRE 397
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 196/405 (48%), Gaps = 32/405 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ A A G + ++H + +FV N LINMY+K G +++A+ +F +
Sbjct: 204 FTSVLSAVASQGAVDLGRRVHAQSVKFGCRST--VFVCNSLINMYSKCGLVEEAKAVFRQ 261
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----G 122
M R++VSW L++G + + E +LF S ++ + ++V+ C L
Sbjct: 262 METRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALA 321
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENME-FRNVISWNSMIAAFR 179
+ +H+ LK + V A+++ YSK C D+A+ +F M +NV+SW +MI
Sbjct: 322 RQLHSCVLKHGFHSDGNVMTAIMDAYSK-CGELDDAFNIFLLMPGSQNVVSWTAMIGGC- 379
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
++ I L A LF +++ + + P+ T+S VL A ++ + +H
Sbjct: 380 ---IQNADIPLAAA---------LFSRMREDNVKPNEFTYSTVLTASIPILLPQ----IH 423
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ I K ++ + AL+ +Y++ G+ + +F + + D+V+W+++L Y+ G
Sbjct: 424 AQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCD 483
Query: 300 EALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
A +F M++Q P+ T S + AC+ + + FH++ + + + +
Sbjct: 484 GATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSAL 543
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V + R G I ++ +++ E + D V W+ ++ +HG ++ A
Sbjct: 544 VTMYARKGSI-DSARIVFERQTDRDLVSWNSMISGYAQHGYSKEA 587
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/600 (37%), Positives = 333/600 (55%), Gaps = 59/600 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
LH H I NF L YA G+L + LF P NV WT +I+ +A
Sbjct: 51 LHHHPILNFK-----------LQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAH- 98
Query: 87 GNAEECFRLFCSLLQYFF--------PNEFSLASVLISCDYLHGKLVHALALKFSLDAHV 138
F LF L Y+ PN F+L+S+L +C + VH+ A+KF L +H+
Sbjct: 99 ------FDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARAVHSHAIKFGLSSHL 152
Query: 139 YVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
YV+ L++ Y++ A K+F+ M R+++S+ +M+ + + +A LF M +
Sbjct: 153 YVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMK 212
Query: 198 E------------------EALFLFRQLQREG-------MAPDWCTFSIVLKACAGLVTE 232
+ EAL FR++ + P+ T VL +C +
Sbjct: 213 DVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGAL 272
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VHS + G + + + AL+ Y +CGS+ +++VFD M D+V+WNS++ Y
Sbjct: 273 ECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGY 332
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+HG + EALQLF M V+P TFV++L+AC+HAGLV +G +VF SM + +G+ P+
Sbjct: 333 GIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPK 392
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
++HY CMV+LLGR GR+ EA L+R M +EPD V+W LL +CR H L E A L
Sbjct: 393 VEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILV 452
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
S +V +SN+Y + ++ +R MKGS V K PG S IE++NRVHEF +G
Sbjct: 453 SNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGD 512
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
+RHP+ + I+ LE++ G LK Y P+T LHDI E+ KE+ L HSEKLAL F +++
Sbjct: 513 RRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLIS 572
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+I+KN+R+C+DCH MK+ S + G++I++RD NRFHHF++ CSC DYW
Sbjct: 573 TSP----GAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+ H +H+ + + G ++ L +YA G + S +F + ++ W I+
Sbjct: 35 STHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIIN 94
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
A+A AL +S M +QP++ T SLL AC+ + HS G+
Sbjct: 95 AHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT-----LHPARAVHSHAIKFGLS 149
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
L +VD R G + A+KL MP E V ++ +L KHG
Sbjct: 150 SHLYVSTGLVDAYARGGDVASAQKLFDAMP-ERSLVSYTAMLTCYAKHG 197
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/624 (35%), Positives = 351/624 (56%), Gaps = 59/624 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFG--------- 56
++++ L AC ++ QLH + + D F++NHL+N+Y+KFG
Sbjct: 70 RLFSNLLQACIPLKSVSLGKQLHSLIFTS--GCSSDKFISNHLLNLYSKFGELQAAVALF 127
Query: 57 ----------------------YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
L+ A++LFDEMP RNV +W A+++G + EE
Sbjct: 128 DRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALL 187
Query: 95 LFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYS 149
LF + + F P+E+SL SVL C +L G+ VHA +K + ++ V +L +MY
Sbjct: 188 LFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYM 247
Query: 150 KSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
K+ + + +V M ++++WN++++ A+ E L + ++
Sbjct: 248 KAGSMHDGERVINWMPDCSLVAWNTLMSGK-------------AQKGYFEGVLDQYCMMK 294
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G PD TF V+ +C+ L +H+ K G + + ++L+ Y+RCG +
Sbjct: 295 MAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQ 354
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
S + F + D+V W+S++ AY HGQ +EA++LF+ M N+ + TF+SLL ACS
Sbjct: 355 DSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACS 414
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H GL +G +F M++ +G+ +L HY C+VDLLGR G + EAE +IR MP++ D++IW
Sbjct: 415 HCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIW 474
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LL +C+ H +A A ++ +++P DS +V ++NIY + + +R+ MK
Sbjct: 475 KTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDK 534
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K PG+SW+E++N+VH+F G + HP+ I + LEEL ++K GYVP+TS LHD+
Sbjct: 535 MVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDM 594
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+ E KE+ L HHSEKLA+ FA+MN E IR+MKN+R+C DCH +K S++
Sbjct: 595 DNEEKEQILRHHSEKLAIAFALMNT----PEGVPIRVMKNLRVCSDCHVAIKYISEIKKL 650
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI+VRDS+RFHHFK+ CSC DYW
Sbjct: 651 EIIVRDSSRFHHFKNGTCSCGDYW 674
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/575 (36%), Positives = 327/575 (56%), Gaps = 35/575 (6%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YF 103
N ++++Y G ++ A +F+ M +R++VSW +I+GY Q+G + F +L
Sbjct: 417 NVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSM 476
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV 159
P+ F++ SVL +C L GK +H+ L+ + + NALI+ Y+KS + E +
Sbjct: 477 EPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARR 536
Query: 160 FENMEF---RNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------ 198
+ NVIS+ +++ + QA E+F M N +
Sbjct: 537 IMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQND 596
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EA+ LFR + G P+ T + VL ACA L + +H + E ++NA+I
Sbjct: 597 EAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAII 656
Query: 259 HAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
YAR GS+ L+++VFD++ + + ++W S++ A A HG ++A+ LF M V+PD
Sbjct: 657 TVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDH 716
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T+V +LSAC+HAG V +G + + M HG+VPQ+ HYACMVDL R G + EA + I+
Sbjct: 717 ITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQ 776
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
MP+ PD+V+W LL +CR LAELAA KL ++P +S + ++N+Y G +N
Sbjct: 777 RMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWND 836
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
A I K K V+K G SW + +VH F + HPQR++I++K E+ ++K G+
Sbjct: 837 AARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGF 896
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
VP+ + LHD+++E KEE L HSEKLA+ F +++ E++ +RIMKN+R+C DCH
Sbjct: 897 VPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLIST----PEKTTLRIMKNLRVCNDCHT 952
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K S + +EI+VRD+ RFHHF+D CSC DYW
Sbjct: 953 AIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 200/432 (46%), Gaps = 72/432 (16%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
+ ++ P ++ F N L+++YAK G L DA +F EMP R+ VSWT +I G + G
Sbjct: 270 LFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFW 329
Query: 91 ECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALI 145
+ + F ++ + F P++F+L +VL SC + G+ VH +K L + V VAN+++
Sbjct: 330 DAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVL 389
Query: 146 NMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM--------- 194
MY K C D A VFE M+ R+V SWN M++ + A+ +F M
Sbjct: 390 YMYGK-CGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWN 448
Query: 195 -------KNEEEAL---FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+N + + F R L M PD T + VL ACA L + +HS I +
Sbjct: 449 TIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILR 508
Query: 245 YGFEDDTVIANALIHAYARCGSISL---------------------------------SK 271
G + I NALI YA+ GS+ ++
Sbjct: 509 TGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAR 568
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
++FD M D+++W +++ Y +GQ EA++LF +M +P+S T ++LSAC+
Sbjct: 569 EIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLA 628
Query: 329 LVQEGN----KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ G K S+ E V ++ + R G + A ++ ++ +++
Sbjct: 629 YLDYGKQIHCKAIRSLQEQSVSVSN-----AIITVYARSGSVPLARRVFDQICWRKETIT 683
Query: 385 WSVLLGSCRKHG 396
W+ ++ + +HG
Sbjct: 684 WTSMIVAMAQHG 695
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 150/342 (43%), Gaps = 62/342 (18%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMY-----SKSCADEAWKVFENMEF--RNVISWNSM 174
G+ +HA A+K L Y+ N L+ Y S+ C EA +F+++ + RN +WNS+
Sbjct: 228 GRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNSL 287
Query: 175 IAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDW 216
++ + A +FA+M + + +A+ F + EG AP
Sbjct: 288 LSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQ 347
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T + VL +CA + VH + K G +AN++++ Y +CG ++ VF++
Sbjct: 348 FTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 407
Query: 277 MTY-------------------------------HDLVSWNSILKAYALHGQAKEALQLF 305
M +VSWN+I+ Y +G AL+ F
Sbjct: 408 MQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFF 467
Query: 306 SNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
S M +++PD+ T S+LSAC++ +++ G K HS + G+ ++
Sbjct: 468 SRMLSASSMEPDAFTVTSVLSACANLRMLKMG-KQMHSYILRTGMPCSSQIMNALISTYA 526
Query: 362 RVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRKHGETRLAE 402
+ G + A +++ + + +VI ++ LL K G+T+ A
Sbjct: 527 KSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAR 568
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
++ A + ACA + Q+H I + + Q + V+N +I +YA+ G + AR
Sbjct: 613 NSHTLAAVLSACASLAYLDYGKQIHCKAIRSL--QEQSVSVSNAIITVYARSGSVPLARR 670
Query: 64 LFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC 117
+FD++ ++ ++WT++I AQHG E+ LF +++ P+ + VL +C
Sbjct: 671 VFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSAC 726
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/593 (36%), Positives = 332/593 (55%), Gaps = 30/593 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ C + G+ A+ +H + + + +LFV N LI++Y K G L +A +F M
Sbjct: 172 SSVLPMCVVLGDRALALVMHVYAVKH--GLSGELFVCNALIDVYGKLGMLTEAHWVFGGM 229
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEF---SLASVLISC-DYLHGK 123
R++V+W ++IS Q G LF +++ P+ SLAS + C D L K
Sbjct: 230 ALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAK 289
Query: 124 LVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH + D + NA+++MY+K S D A KVF+N+ R+V+SWN++I +
Sbjct: 290 SVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQN 349
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L +AI ++ M N E G+ P TF VL A + L + +H+L
Sbjct: 350 GLANEAIRIYNDMHNHE------------GLKPIQGTFVSVLPAYSYLGGLQQGMRMHAL 397
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G D + LI YA+CG + + +F+ M WN+I+ +HG +A
Sbjct: 398 SIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKA 457
Query: 302 LQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L LFS M ++PD TFVSLL+ACSHAGLV +G F M +G+VP HY CMVD
Sbjct: 458 LSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVD 517
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+LGR G++ EA + I+ MP++PDS +W LLG+CR HG + ++A+ L +L+P +
Sbjct: 518 MLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGY 577
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR--HPQRE 476
+V MSN+Y G ++ +R ++ ++K PG S +E++ V F SG + HPQ E
Sbjct: 578 YVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHE 637
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I + L +L+ ++K GYVP+ S L D+EE+ KE+ L +HSE+LA+ F I+N
Sbjct: 638 EIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINT----PP 693
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + I KN+R+C DCH+ K S + +EI+VRD+NRFHHFKD CSC D+W
Sbjct: 694 GTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 225/442 (50%), Gaps = 47/442 (10%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A HACAL + LH PN +F + L++ Y +FG + +A +FDEM
Sbjct: 85 AAQLHACALRLGL-----LH-------PN----VFASGSLVHAYLRFGRVAEAYRVFDEM 128
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGK---- 123
P+R+V +W A++SG ++ A + L ++ + + +L+SVL C L +
Sbjct: 129 PERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALAL 188
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
++H A+K L ++V NALI++Y K EA VF M R++++WNS+I+A
Sbjct: 189 VMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGG 248
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A A+ELF M G+ PD T + A A E A +VH +
Sbjct: 249 KVAAAVELFHGM-------------MESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYV 295
Query: 243 AKYGFE-DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ G++ D + NA++ YA+ I +++VFD + D+VSWN+++ Y +G A EA
Sbjct: 296 RRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEA 355
Query: 302 LQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--AC 355
++++++M ++P TFVS+L A S+ G +Q+G ++ H++ G+ LD Y C
Sbjct: 356 IRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRM-HALSIKTGL--NLDVYVTTC 412
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG-SCRKHGETRLAELAATKLKQLEPG 414
++DL + G+++EA L MP +++ G HG L+ + + ++++P
Sbjct: 413 LIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKP- 471
Query: 415 DSLGFVQMSNIYCLSGSFNKAR 436
D + FV + +G ++ R
Sbjct: 472 DHVTFVSLLAACSHAGLVDQGR 493
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/564 (38%), Positives = 338/564 (59%), Gaps = 35/564 (6%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK---RNVVSWTALISGYAQHGNAEECFRLFCSLL 100
V N ++ Y++ G+L++AR +F EM + R+ VSW A+I QH E LF ++
Sbjct: 176 VNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMV 235
Query: 101 QYFFP-NEFSLASVL--ISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ + F++ASVL +C D + G H + +K + +V + LI++YSK CA
Sbjct: 236 RRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSK-CAGG 294
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
E KVFE + +++ WN+MI+ F +Q +L E+ ++ FR++Q G
Sbjct: 295 MVECRKVFEEIAAPDLVLWNTMISGF------SQYEDL------SEDGIWCFREMQHNGF 342
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSK 271
PD C+F V AC+ L + VH+L K + V + NAL+ Y++CG++ ++
Sbjct: 343 HPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDAR 402
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VFD M H++VS NS++ YA HG E+L+LF M ++ P++ TF+++LSAC H G
Sbjct: 403 RVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTG 462
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
V+EG K F+ M E + P+ +HY+CM+DLLGR G++ EAE++I MP P S+ W+ L
Sbjct: 463 KVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATL 522
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
LG+CRKHG LA AA + QLEP ++ +V +SN+Y + + +A +++ M+ V+
Sbjct: 523 LGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVK 582
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL---HDI 505
K PG SWIEI+ +VH F + HP + I + E++ ++K GYVP+ AL ++
Sbjct: 583 KKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEV 642
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
E + KE +L +HSEKLA+ F +++ E I ++KN+RIC DCHN +KL S + G+
Sbjct: 643 EPDEKERRLLYHSEKLAVAFGLIST----EEWVPILVVKNLRICGDCHNAIKLISAITGR 698
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI VRD++RFH FK+ CSC DYW
Sbjct: 699 EITVRDTHRFHCFKEGHCSCGDYW 722
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 39/416 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L+ C N + + L +PN +F N LIN YAK + AR +FDE
Sbjct: 50 FTLLYSKCGSLHNAQTSFDL-----TQYPN----VFSYNTLINAYAKHSLIHLARQVFDE 100
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG--KL 124
+P+ ++VS+ LI+ YA G RLF + + F + F+L+ V+I+C G +
Sbjct: 101 IPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQ 160
Query: 125 VHALALKFSLDAHVYVANALINMYS-KSCADEAWKVFENM---EFRNVISWNSMIAAFRA 180
+H + D + V NA++ YS K +EA +VF M R+ +SWN+MI A
Sbjct: 161 LHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIV---A 217
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
C + + EA+ LFR++ R G+ D T + VL A + H
Sbjct: 218 CGQHREGL----------EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHG 267
Query: 241 LIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ-A 298
++ K GF ++ + + LI Y++C G + ++VF+++ DLV WN+++ ++ + +
Sbjct: 268 MMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLS 327
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++ + F M PD +FV + SACS+ G +V +++ ++
Sbjct: 328 EDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNA 387
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG----ETRLAELAATK 407
+V + + G + +A ++ MP E + V + ++ +HG RL EL K
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMP-EHNMVSLNSMIAGYAQHGVEVESLRLFELMLQK 442
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%), Gaps = 43/325 (13%)
Query: 100 LQYFFPNEF-SLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
+Q FP + + ++L +C D + GK +HAL K + Y++N +YSK C
Sbjct: 1 MQCTFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSK-CGS 59
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE-------------- 198
A F+ ++ NV S+N++I A+ L A ++F ++ +
Sbjct: 60 LHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADR 119
Query: 199 ----EALFLFRQLQREGMAPDWCTFSIVLKACA---GLVTERHASAVHSLIAKYGFEDDT 251
AL LF +++ D T S V+ AC GLV + +H + G++
Sbjct: 120 GECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQ-----LHCFVVVCGYDCYA 174
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTY---HDLVSWNSILKAYALHGQAKEALQLFSNM 308
+ NA++ Y+R G ++ +++VF +M D VSWN+++ A H + EA++LF M
Sbjct: 175 SVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREM 234
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR-VG 364
++ D T S+L+A + + G + FH M+ G + ++DL + G
Sbjct: 235 VRRGLKVDMFTMASVLTAFTCVKDLVGGMQ-FHGMMIKSGFHGNSHVGSGLIDLYSKCAG 293
Query: 365 RILEAEKLIREMPMEPDSVIWSVLL 389
++E K+ E+ PD V+W+ ++
Sbjct: 294 GMVECRKVFEEIA-APDLVLWNTMI 317
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/615 (35%), Positives = 342/615 (55%), Gaps = 43/615 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+AT+ +C L + Q+ H+I F + + V N LI+M++ F +++A ++FD
Sbjct: 479 FATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS---VSVANSLISMFSSFSSVEEACYVFD 535
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC------DYL 120
M + +++SW A+IS YA HG E R F + NE + ++ D L
Sbjct: 536 HMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH--LHNETNSTTLSSLLSVCSSVDNL 593
Query: 121 H-GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H L +K LD++V + N L+ +YS++ +++A VF+ M R++ISWNSM+A +
Sbjct: 594 KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACY 653
Query: 179 RACKLEAQAIELFAKM-------------------KNEE--EALFLFRQLQREGMAPDWC 217
+++ A++ +NEE EA+ ++ ++ +G+ ++
Sbjct: 654 VQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 713
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T + L A A L +H L+ K GFE D + NA + Y +CG + ++ +
Sbjct: 714 TM-VSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQP 772
Query: 278 TYHDLVSWNSILKAYALHG---QAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGN 334
+SWN ++ A+A HG +A+E + +PD TFVSLLSAC+H GLV EG
Sbjct: 773 INRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 832
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ SM GV P ++H C++DLLGR GR+ AE I+EMP+ P+ + W LL +CR
Sbjct: 833 AYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRI 892
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG LA A L +L+P D +V SN+ SG + +RKEM + ++K P S
Sbjct: 893 HGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACS 952
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W++++++VH F G K HPQ I KL EL+ K GYVP+TS ALHD++EE KE L
Sbjct: 953 WVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNL 1012
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
++HSE+LAL F ++N E S +RI KN+R+C DCH+ K S ++G++IV+RD R
Sbjct: 1013 WNHSERLALAFGLINT----PESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYR 1068
Query: 575 FHHFKDRICSCNDYW 589
FHHF CSC DYW
Sbjct: 1069 FHHFSGGKCSCGDYW 1083
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 216/481 (44%), Gaps = 120/481 (24%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVT----------------NHLIN 50
+ L +A A +G+++ A L + M+ +DLF + N LI+
Sbjct: 230 VTGLLINAYAKNGSLRSAKDLRKGMLK------KDLFSSTALITGYAHEGIYTMGNALID 283
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNA--------------------- 89
MYAK G ++DA+ FDEM ++NV+SWT+LISGYA+HG
Sbjct: 284 MYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWS 343
Query: 90 ------------EECFRLFCSLLQYFF-PNEFSLASVLISCD---YL--HGKLVHALALK 131
EE LFC + PN F +AS++ +C Y+ G VH +K
Sbjct: 344 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 403
Query: 132 FSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+ VYV AL++ Y S A K+FE M NV+SW S++ +
Sbjct: 404 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGY------------ 451
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
+ N E L +++++++EG++ + TF+ V +C L + V I +YGFED
Sbjct: 452 -SDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS 510
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SN 307
+AN+LI ++ S+ + VFD M D++SWN+++ AYA HG +E+L+ F +
Sbjct: 511 VSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH 570
Query: 308 MNVQPDSATFV-----------------------------------SLLSACSHAGLVQE 332
++ + +S T +LL+ S AG ++
Sbjct: 571 LHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSED 630
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM--EPDSVIWSVLLG 390
VF +M E ++ AC V + G+ L+ K++ E+ +PD V W+ L+G
Sbjct: 631 AELVFQAMTERD-LISWNSMMACYV----QDGKCLDGLKILAELLQMGKPDRVTWNALIG 685
Query: 391 S 391
Sbjct: 686 G 686
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 193/469 (41%), Gaps = 136/469 (28%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+Y + C KQ +H H+I N DL + LI Y K G + AR++F
Sbjct: 31 SLYLKILQLCIDKKAKKQGHLIHTHLITN--GFGSDLHLNTKLIIFYVKVGDVIAARNVF 88
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLV 125
D MP+R+VVSWTA++SGY+Q+G E+ F LF +
Sbjct: 89 DGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRH------------------------ 124
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKL 183
V +AL++ +SK C ++A +F M R+V+SWN+MI +
Sbjct: 125 ----------CGVKANHALVDFHSK-CGKMEDASYLFGTMMERDVVSWNAMIGGY----- 168
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA------------GLVT 231
A++ FA +++ +FR + R G+ PD T VL+A A G++T
Sbjct: 169 ---AVQGFA-----DDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIIT 220
Query: 232 E-----------------------RHASAVH------------SLIAKYGFEDDTVIANA 256
+ R A + +LI Y E + NA
Sbjct: 221 QLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNA 280
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA------------------ 298
LI YA+ G I +K+ FD+M +++SW S++ YA HG
Sbjct: 281 LIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEA 340
Query: 299 ---------------KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+EA+ LF M V+P+ SL++ACS +G + + H
Sbjct: 341 SWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGF 400
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ G++ + +V G +G + A+KL EMP + + V W+ L+
Sbjct: 401 VVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 448
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 205/436 (47%), Gaps = 88/436 (20%)
Query: 46 NH-LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YF 103
NH L++ ++K G ++DA +LF M +R+VVSW A+I GYA G A++ F +F S+L+
Sbjct: 130 NHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 189
Query: 104 FPNEFSLASVL------------------------ISCDYLHGKLVHALALKFSLD---- 135
P+ ++L SVL S D + G L++A A SL
Sbjct: 190 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKD 249
Query: 136 --------------------AH--VY-VANALINMYSKSCA-DEAWKVFENMEFRNVISW 171
AH +Y + NALI+MY+KS ++A + F+ ME +NVISW
Sbjct: 250 LRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISW 309
Query: 172 NSMIAAF--RACKLEAQAIELFAKM--KNE----------------EEALFLFRQLQREG 211
S+I+ + A A +F +M +NE EEA+ LF Q+ G
Sbjct: 310 TSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 369
Query: 212 MAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ P+ + ++ AC +G + + VH + K G D + AL+H Y G +
Sbjct: 370 VEPNGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 428
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++++F++M H++VSW S++ Y+ G E L ++ M V + TF ++ S+C
Sbjct: 429 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC-- 486
Query: 327 AGLVQE---GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
GL+++ G +V +++ +G + ++ + + EA + M E D +
Sbjct: 487 -GLLEDQVLGYQVLGHIIQ-YGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDII 543
Query: 384 IWSVLLGSCRKHGETR 399
W+ ++ + HG R
Sbjct: 544 SWNAMISAYAHHGLCR 559
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
+L+ C ++ +H+ + GF D + LI Y + G + ++ VFD M
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+VSW +++ Y+ +G+ ++A LFS+M V+ + A V S C G +++ + +F
Sbjct: 96 VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHA-LVDFHSKC---GKMEDASYLFG 151
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM---PMEPDSVIWSVLLGSCRKH 395
+M+E V + M+ G ++ + R M + PD +L + +
Sbjct: 152 TMMERDVV-----SWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEG 206
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQ--MSNIYCLSGSFNKARLIRKEM 442
G +A + QL G S V + N Y +GS A+ +RK M
Sbjct: 207 GGLIIANQIHGIITQLGYG-SYDIVTGLLINAYAKNGSLRSAKDLRKGM 254
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 338/597 (56%), Gaps = 33/597 (5%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N K +H H I QD FV L+ +Y K Y+D A LF NV +T+L
Sbjct: 39 NPKHVQSIHCHAIKT--RTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSL 96
Query: 80 ISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
I G+ G+ + LFC ++ ++ + +++ ++L +C GK VH L LK L
Sbjct: 97 IDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGL 156
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+A L+ +Y K ++A K+F+ M R+V++ MI + C + +AIE+F +
Sbjct: 157 GLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNE 216
Query: 194 MKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
M + L +FR++Q +G+ P+ TF VL ACA L
Sbjct: 217 MGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELG 276
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H+ + K G E + +A ALI+ Y+RCG I ++ +FD + D+ ++NS++ ALH
Sbjct: 277 RWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALH 336
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G++ EA++LFS M V+P+ TFV +L+ACSH GLV G ++F SM HG+ P+++H
Sbjct: 337 GKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEH 396
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y CMVD+LGRVGR+ EA I M +E D + LL +C+ H + E A L +
Sbjct: 397 YGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHY 456
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
DS F+ +SN Y G ++ A +R++M+ + K PG S IE+ N +HEF SG RH
Sbjct: 457 RIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRH 516
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+R+ I+KKLEEL K GY+P T +ALHDI++E KE L HSE+LA+ + +++ +
Sbjct: 517 PERKRIYKKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEA 576
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R+ KN+RIC DCH +KL + + ++IVVRD NRFHHF++ CSC DYW
Sbjct: 577 Y----TTLRVGKNLRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 328/559 (58%), Gaps = 27/559 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF---- 96
++FV L++MY+KFG + AR LF+ M +RNVVSW A++SGY+ HG +EE LF
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMR 215
Query: 97 --CSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMY-SKSCA 153
L+ ++ AS+ + C + G +H ++ + ++ AL+++Y S +C
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQV-GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCV 274
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+A +VF M ++V +W M+ F + + +AI+ F KM L + +
Sbjct: 275 DDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM------------LGIQNLK 322
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D +L +C+ + VH+L K F ++ + +A+I YA CG++ +K+
Sbjct: 323 LDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F M D+V WN+++ ++G +A+ LF M + PD +TFVS+L ACSHAG+V
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG ++F+ M++ +P L HYAC++D+LGR G++ A I MP +PD ++S LLG
Sbjct: 443 YEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR HG +L + K+ ++EP D+ +V +SN+Y L+G++ ++ R ++ R++K
Sbjct: 503 ACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKD 562
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IEI ++ F +G K HPQ I L+ LI ++K GYVP T++ L D+ ++ K
Sbjct: 563 PGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMK 622
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
++ LYHHSEK+A+ F +M + ++IRI KN+R C DCH+ K S + G+ +V++
Sbjct: 623 KDILYHHSEKMAIAFGLMRT----KPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIK 678
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFH F+D +CSC DYW
Sbjct: 679 DANRFHVFQDGVCSCRDYW 697
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 203/409 (49%), Gaps = 29/409 (7%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++K Q+H +I + + F++N L+N Y G L DA+ +F P +NVVSWT L
Sbjct: 36 DLKPLQQIHAQIITS--GLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93
Query: 80 ISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
ISG A++ E +F + + F PN +++SVL + L K VH ++
Sbjct: 94 ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+ +V+V AL++MYSK C A ++FE+M RNV+SWN++++ + +AI+LF
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNL 213
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
M+ R+G+ D+ T ++ A + + + +H I + G+E+D I
Sbjct: 214 MR-------------RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHI 260
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----N 309
AL+ Y + + +VF +M D+ +W +L ++ A++ F+ M N
Sbjct: 261 KTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
++ DS + +LS+CSH+G +Q+G +V H++ + + ++D+ G + +A
Sbjct: 321 LKLDSIVLMGILSSCSHSGALQQGRRV-HALAIKTCFANNIFVGSAVIDMYANCGNLEDA 379
Query: 370 EKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDS 416
++ M E D V W+ ++ +G + K L+P +S
Sbjct: 380 KRFFYGMG-EKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDES 427
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/607 (34%), Positives = 338/607 (55%), Gaps = 35/607 (5%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
ACA H + +LH H+I ++ + L +N+LINMY K G + DA +LF+++P R
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSL--SNNLINMYGKCGLIQDALNLFNQLPHR 67
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL----HGKLV 125
+ +SW ++++ Q +F ++ + P+ + A ++ +C L GK V
Sbjct: 68 DPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQV 127
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
HA + + V ++L++MY+K D VF+++ +N ISW +MI+ + +
Sbjct: 128 HATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRK 187
Query: 185 AQAIELFAKMK------------------NEEEALFLFRQLQREGM-APDWCTFSIVLKA 225
AI+LF KM N ++ +LF +++ +G+ D S ++ A
Sbjct: 188 LDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGA 247
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
A L +H L+ G+E ++NAL+ YA+C + +K++F +M D+VSW
Sbjct: 248 SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSW 307
Query: 286 NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
SI+ A HG A+EAL L++ M ++P+ TFV L+ ACSH GLV +G F+SM++
Sbjct: 308 TSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK 367
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
++G+ P L HY C++DLL R G + EAE LI+ MP +PD W+ LL +C H T +
Sbjct: 368 DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGI 427
Query: 403 LAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
A L L+P D ++ +SNIY + + +R+ M V+K PG S I +
Sbjct: 428 RVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKES 487
Query: 463 HEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLA 522
F +G HP +E IF LEEL ++K GY+P+TS LHD+E++ KE QL+ HSE+LA
Sbjct: 488 QVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLA 547
Query: 523 LVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRI 582
+ + ++ V+ I+KN+R+C DCH +K S ++ +EIVVRD+NR+HHFKD
Sbjct: 548 VAYGLLKG----IPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGK 603
Query: 583 CSCNDYW 589
CSCN++W
Sbjct: 604 CSCNNFW 610
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 167/361 (46%), Gaps = 89/361 (24%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++A L ACA+ G +KQ Q+H I + P D+ V + L++MYAK G D R +FD
Sbjct: 107 VFACLVKACAILGAMKQGKQVHATFIVS-PVSDDDV-VKSSLVDMYAKCGLPDIGRVVFD 164
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF---------------CSLLQ--------YF 103
+ +N +SWTA+ISGYAQ G + +LF L+Q Y
Sbjct: 165 SISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYL 224
Query: 104 F----------PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYS 149
F + F L+S++ + L GK +H L + ++ ++V+NAL++MY+
Sbjct: 225 FMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYA 284
Query: 150 KSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K C+D A K+F M R+++SW S+I A+ EEAL L+ ++
Sbjct: 285 K-CSDVLAAKKIFGRMVQRDIVSWTSIIVG-------------TAQHGLAEEALSLYNRM 330
Query: 208 QREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
G+ P+ TF ++ AC+ GLV++ +Y F N++I Y
Sbjct: 331 LSTGLKPNEVTFVGLIYACSHVGLVSK----------GRYFF-------NSMIKDYGINP 373
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS 325
S L + +L + G +EA L M +PD AT+ +LLSAC+
Sbjct: 374 S---------------LQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACN 418
Query: 326 H 326
H
Sbjct: 419 H 419
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/590 (37%), Positives = 329/590 (55%), Gaps = 41/590 (6%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
GN+++A ++ M + + +N +I ++ G + +A LFDEM ++++V+W+A
Sbjct: 293 GNVEEAKHIYHQM------PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSA 346
Query: 79 LISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFS 133
LI+ + Q+ EE R F + + +E S L +C L GKL+H+L+LK
Sbjct: 347 LIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIG 406
Query: 134 LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
++++ + NALI MYSK C D A K+F+ ++ISWNSMI+ + C L A +F
Sbjct: 407 TESYINLQNALIYMYSK-CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIF 465
Query: 192 AKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
M ++ E L LF+++Q G PD T V+ ACA L
Sbjct: 466 DSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALE 525
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH+ I + G + ++ LI Y +CG + + +VF M + +WN+++ A
Sbjct: 526 QGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLA 585
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
++G + +L +FSNM +V P+ TF+ +L AC H GLV EG F+SM+ +H + P +
Sbjct: 586 MNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNV 645
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
HY CMVDLLGR G++ EAE+L+ MPM PD W LLG+C+KHG++ + KL +
Sbjct: 646 KHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE 705
Query: 411 LEPGDSLGF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
L+P D GF V +SNIY G ++ IR M RV K PG S IE +HEF +G
Sbjct: 706 LQP-DHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGD 764
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
K HP +AI L E+ +LK GY P+ + L D++EE KE L+ HSEKLA+ F ++N
Sbjct: 765 KTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLIN 824
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
+ IRIMKN+RIC DCH KL S ++IVVRD +RFHHF+
Sbjct: 825 ----ISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFE 870
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 188/418 (44%), Gaps = 88/418 (21%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
Y L AC++ + +A Q+H H++ F + D++V N LIN ++ + DA +F+
Sbjct: 216 YPLLIQACSIRRSEWEAKQVHNHVLKLGFDS---DVYVRNTLINCFSVCSNMTDACRVFN 272
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVH 126
E + VSW ++++GY + GN EE ++ + P +AS
Sbjct: 273 ESSVLDSVSWNSILAGYIEIGNVEEAKHIY-----HQMPERSIIAS-------------- 313
Query: 127 ALALKFSLDAHVYVANALINMYS-KSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
N++I ++ + EA K+F+ M +++++W+++IA F
Sbjct: 314 ---------------NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACF------- 351
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
Q E++ EEA+ F + + G+ D L ACA L+ +HSL K
Sbjct: 352 QQNEMY------EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKI 405
Query: 246 GFEDDTVIANALIHAYARCGSISL-------------------------------SKQVF 274
G E + NALI+ Y++CG I + +K +F
Sbjct: 406 GTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIF 465
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQ 331
D M D+VSW+S++ YA + E L LF M + +PD T VS++SAC+ ++
Sbjct: 466 DSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALE 525
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+G K H+ ++ +G+ + ++D+ + G + A ++ M +E W+ L+
Sbjct: 526 QG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A L++ + + D T+ ++++AC+ +E A VH+ + K GF+ D + N LI+
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFV- 318
++ C +++ + +VF++ + D VSWNSIL Y G +EA ++ M P+ +
Sbjct: 257 CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM---PERSIIAS 313
Query: 319 -SLLSACSHAGLVQEGNKVFHSMLENHGVV 347
S++ GLV E K+F MLE V
Sbjct: 314 NSMIVLFGMRGLVVEACKLFDEMLEKDMVT 343
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/584 (36%), Positives = 325/584 (55%), Gaps = 35/584 (5%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++++ Q+ + I N P L + +D A +FD++P+ ++V + +
Sbjct: 47 SLRELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTM 106
Query: 80 ISGYAQHGNAEE----CFRLFCSLLQYFFPNEFSLASVLISCDYL----HGKLVHALALK 131
GYA+ + C ++ CS L P++++ +S+L +C L GK +H LA+K
Sbjct: 107 ARGYARFDDPLRAILLCSQVLCSGL---LPDDYTFSSLLKACARLKALEEGKQLHCLAVK 163
Query: 132 FSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
+ ++YV LINMY+ +C D A +VF+ + V+++N++I +
Sbjct: 164 LGVGDNMYVCPTLINMYT-ACNDVDAARRVFDKIGEPCVVAYNAIITSC----------- 211
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
A+ EAL LFR+LQ G+ P T + L +CA L +H + K GF+
Sbjct: 212 --ARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQ 269
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN 309
+ ALI YA+CGS+ + VF M D +W++++ AYA HG +A+ + M
Sbjct: 270 YVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMK 329
Query: 310 ---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
VQPD TF+ +L ACSH GLV+EG + FHSM +G+VP + HY CM+DLLGR GR+
Sbjct: 330 KAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRL 389
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
EA K I E+P++P ++W LL SC HG +A+L ++ +L+ +V +SN+
Sbjct: 390 EEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLC 449
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI 486
+G ++ +RK M K PG S IE+ N VHEF SG H + L+EL+
Sbjct: 450 ARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELV 509
Query: 487 GQLKGMGYVPETSLALH-DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKN 545
+LK GYVP+TSL + DIE+E KE L +HSEKLA+ + ++N + IR++KN
Sbjct: 510 KELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPP----GTTIRVVKN 565
Query: 546 IRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R+CVDCHN K S + G++I++RD RFHHFKD CSC DYW
Sbjct: 566 LRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/594 (36%), Positives = 345/594 (58%), Gaps = 29/594 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
++ Y L AC +I+ ++ +MIN+ + D ++ N ++ M+ K G + DAR L
Sbjct: 131 SETYDALVSACIGLKSIRGVKKVFNYMINSGLDP--DEYLRNRVLLMHVKCGMMIDARRL 188
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCD-----Y 119
FDEMP++N++SW +I G G+ E FRLF + Q F + +I
Sbjct: 189 FDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLI 248
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H+ +LK + V+VA ALI+MYSK ++A VF+ M + + WNS+IA +
Sbjct: 249 FAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGY 308
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A EEAL ++ +++ G+ D TFSI+++ CA L + HA
Sbjct: 309 -------------ALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQA 355
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + ++GF D V AL+ Y++ G I +K VFD M + +++SWN+++ Y HG+
Sbjct: 356 HAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRG 415
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
EA+++F M + P+ TF+++LSACS++GL G ++F SM +H + P+ HYAC
Sbjct: 416 VEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYAC 475
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
M++LLGR G + EA LI++ P +P +W+ LL +CR H L + AA KL + P
Sbjct: 476 MIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEK 535
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+V + NIY SG +A + + +K +R P SWIEI+ + + F SG K H Q
Sbjct: 536 LSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQS 595
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I++KL+EL+ ++ GYVP+ L D++E+ +E L +HSEKLA+ F ++N
Sbjct: 596 KEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQ-EERVLLYHSEKLAIAFGLINTS---- 650
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + ++I+++ RIC DCH+ +KL + + +EIVVRD++RFHHFKD CSC DYW
Sbjct: 651 DWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 300 EALQLFS----NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
EAL+LF N DS T+ +L+SAC ++ KVF+ M+ N G+ P D Y
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMI-NSGLDP--DEYLR 169
Query: 356 MVDLLGRV--GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
LL V G +++A +L EMP E + + W+ ++G G+
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMP-EKNILSWNTIIGGLVDAGD 212
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/562 (36%), Positives = 321/562 (57%), Gaps = 34/562 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV+ LI++Y+K G +++A LF ++ SW A++ G+ N E RLF SL+
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLF-SLM 491
Query: 101 --------QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
Q F N A L+ GK +HA+ +K ++V + +++MY K C
Sbjct: 492 HERGEKADQITFANAAKAAGCLVRLQ--QGKQIHAVVIKMRFHYDLFVISGILDMYLK-C 548
Query: 153 AD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ A KVF + + ++W ++I+ C + EE+ALF + Q++
Sbjct: 549 GEMKSARKVFNQIPSPDDVAWTTVISG---CVENGE----------EEQALFTYHQMRLA 595
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ PD TF+ ++KAC+ L +H+ I K D + +L+ YA+CG+I +
Sbjct: 596 GVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDA 655
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F +M + WN+++ A HG A+EAL F+ M V PD TF+ +LSACSH+
Sbjct: 656 YGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHS 715
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GL + K F SM + +GV P+++HY+C+VD L R G I EAEK++ MP E + ++
Sbjct: 716 GLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRT 775
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +CR G+ E A KL ++P DS +V +SNIY + + A R MK V
Sbjct: 776 LLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNV 835
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG SWI+++N+VH F +G + H + + I+ K+E ++ ++K GYVP+T AL DIEE
Sbjct: 836 KKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEE 895
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L +HSEKLA+ + +M + +R++KN+R+C DCHN +K S++ +EI
Sbjct: 896 EDKESALSYHSEKLAIAYGLMKTPP----STTLRVIKNLRVCGDCHNAIKYISNVFQREI 951
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
V+RD+NRFHHF+ ICSC DYW
Sbjct: 952 VLRDANRFHHFRSGICSCGDYW 973
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 39/354 (11%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE----FSLASVLIS 116
A LF +V W +S Y Q G E F +++ P + + SV+ S
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 117 CDYLH-GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSM 174
++L GK +H ++F D V VAN+ INMY K+ + A ++F M+ ++ISWN++
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTV 369
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ C A+ EE +L LF L R G+ PD T + VL+AC+ L E +
Sbjct: 370 ISG---C----------ARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSL-EESY 415
Query: 235 --ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH+ K G D+ ++ ALI Y++ G + ++ +F DL SWN+++ +
Sbjct: 416 CVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGF 475
Query: 293 ALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGL---VQEGNKVFHSMLENHGVVPQ 349
+ +EAL+LFS M+ + + A ++ +A AG +Q+G ++ H VV +
Sbjct: 476 TVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI-------HAVVIK 528
Query: 350 LD-HY-----ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ HY + ++D+ + G + A K+ ++P PD V W+ ++ C ++GE
Sbjct: 529 MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGE 581
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 177/415 (42%), Gaps = 76/415 (18%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q ++ L HA A ++ + H ++ + N D +VTN+LI MYAK G L AR LF
Sbjct: 15 QWFSILRHAIA-DSDLILGKRTHAVIVTSGLNP--DRYVTNNLITMYAKCGSLFSARKLF 71
Query: 66 DEMPK--RNVVSWTALISGYAQHG------NAEECFRLFCSLLQYFFPNEFSLASVLISC 117
D P+ R++V++ A+++ YA G E F +F L Q S L
Sbjct: 72 DITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKL 131
Query: 118 DYLHG-----KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
L+G + + A+K L V+VA AL+N+Y+K EA +F+ M R+V+ W
Sbjct: 132 CLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLW 191
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF-SIVLKACAGLV 230
N M+ A + +M +E L LF R G+ PD + +I++ V
Sbjct: 192 NVMMKA-------------YVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTV 238
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
ER V + K DD D+ WN L
Sbjct: 239 FERELEQVRAYATKLFVCDDD----------------------------SDVTVWNKTLS 270
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
+Y G+ EA+ F +M V DS T++ +LS + ++ G ++ HG V
Sbjct: 271 SYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI-------HGAV 323
Query: 348 PQL--DHYACM----VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ D + + +++ + G + A ++ +M E D + W+ ++ C + G
Sbjct: 324 VRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGCARSG 377
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 16/227 (7%)
Query: 103 FFPNEFS-LASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKV 159
P FS L + D + GK HA+ + L+ YV N LI MY+K C A K+
Sbjct: 12 LLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAK-CGSLFSARKL 70
Query: 160 FE--NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
F+ R+++++N+++AA+ A EL ++ EA +FR L++ M
Sbjct: 71 FDITPQSDRDLVTYNAILAAY------AHTGELH-DVEKTHEAFHIFRLLRQSVMLTTRH 123
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T S + K C + + A+ K G + D +A AL++ YA+ I ++ +FD+M
Sbjct: 124 TLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRM 183
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
D+V WN ++KAY G E L LFS ++PD + ++L
Sbjct: 184 PVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ATL AC+L ++Q Q+H +++ N D FV L++MYAK G ++DA LF
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMK--LNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRR 661
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDY 119
M R+V W A+I G AQHGNAEE F + + P+ + VL +C +
Sbjct: 662 MNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSH 714
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 333/594 (56%), Gaps = 29/594 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ + ACA G+++ + + + D+FV + L+++YA++G + DA +
Sbjct: 108 STTFTLALSACARLGDLRGGESVRDRAFD--AGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DY 119
FD MP+R+ V+W+ +++G+ G + +++ + + +E + V+ +C +
Sbjct: 166 FDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAF 178
G VH L+ + V A +L++MY+K+ D A +VF M RN +SW++MI+ F
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ +EAL LFR +Q G+ PD L AC+ + + +V
Sbjct: 286 -------------AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSV 332
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H I + F+ + ++ A I Y++CGS++ ++ +F+ ++ DL+ WN+++ HG+
Sbjct: 333 HGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRG 391
Query: 299 KEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++AL LF MN ++PD ATF SLLSA SH+GLV+EG F M+ + + P HY C
Sbjct: 392 QDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVC 451
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VDLL R G + EA L+ M EP IW LL C + + L E A + +L+P D
Sbjct: 452 LVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDD 511
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+SN+Y + ++K R +RK MK S +K PG S IEI H F + HPQR
Sbjct: 512 VGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQR 571
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
E I K+ +L +++ MGY+P T HD+EEE KE+QL +HSEKLA+ F ++N G R
Sbjct: 572 EEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTR 631
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+KN+R+C DCH+ +K S + +EIVVRD+ RFHHFKD +CSC DYW
Sbjct: 632 ----LVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 183/368 (49%), Gaps = 35/368 (9%)
Query: 44 VTNHLINMYAKFGYLDDARH-LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+ + L YA+ G L A L ++ +W A+I+ +++ G+ R+F +L
Sbjct: 44 LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALPPA 103
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAW 157
P+ + L +C D G+ V A V+V ++L+++Y++ A +A
Sbjct: 104 ARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAV 163
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
KVF+ M R+ ++W++M+A F + AI+ ++R+++ +G+ D
Sbjct: 164 KVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQ-------------MYRRMREDGVKGDEV 210
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
V++AC R ++VH + ++G D V A +L+ YA+ G + ++ +VF M
Sbjct: 211 VMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLM 270
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ + VSW++++ +A +GQ+ EAL+LF NM +QPDS VS L ACS+ G ++ G
Sbjct: 271 VHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR 330
Query: 335 KVFHSMLENHGVVPQLDHYACM-----VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V HG + + + C+ +D+ + G + A+ L M + D ++W+ ++
Sbjct: 331 SV-------HGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLF-NMISDRDLILWNAMI 382
Query: 390 GSCRKHGE 397
C HG
Sbjct: 383 ACCGAHGR 390
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
++ + AL +FR L PD TF++ L ACA L R +V G++DD
Sbjct: 85 SRRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ ++L+H YAR G++ + +VFD+M D V+W++++ + GQ +A+Q++ M
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
V+ D + ++ AC+ A V+ G V H L HG+ + +VD+ + G +L+
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASV-HGHLLRHGMRMDVVTATSLVDMYAKNG-LLD 261
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+ + + + V WS ++ ++G++
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQS 291
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/594 (36%), Positives = 339/594 (57%), Gaps = 27/594 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S +A++ CA ++ QLH ++ Q+ + L+ Y+K + DA
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTAMLDALR 351
Query: 64 LFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH 121
LF E+ NVVSWTA+ISG+ Q+ EE LF + + PNEF+ + +L + +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
VHA +K + + V AL++ Y K +EA KVF ++ +++++W++M+A +
Sbjct: 412 PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGY-- 469
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL-VTERHASAVH 239
A+ E A+ +F +L + G+ P+ TFS +L CA + H
Sbjct: 470 -----------AQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 518
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
K + +++AL+ YA+ G+I +++VF + DLVSWNS++ YA HGQA
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 578
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL +F M V+ D TF+ + +AC+HAGLV+EG K F M+ + + P +H +CM
Sbjct: 579 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDL R G++ +A K+I MP S IW +L +CR H +T L LAA K+ ++P DS
Sbjct: 639 VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 698
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SN+Y SG + + +RK M V+K PG SWIE++N+ + F +G + HP ++
Sbjct: 699 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 758
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ KLE+L +LK +GY P+TS L DI++EHKE L HSE+LA+ F ++ +
Sbjct: 759 QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLI----ATPK 814
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF-KDRICSCNDYW 589
S + I+KN+R+C DCH +KL + + +EIVVRDSNRFHHF D +CSC D+W
Sbjct: 815 GSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 195/372 (52%), Gaps = 31/372 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V L++ Y K D R +FDEM +RNVV+WT LISGYA++ +E LF +
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 101 -QYFFPNEFSLASVL--ISCDYLHGK--LVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ PN F+ A+ L ++ + + G+ VH + +K LD + V+N+LIN+Y K C +
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK-CGNV 245
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A +F+ E ++V++WNSMI+ + A L+ +A+ +F M+ + +L
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR------LNYVRLSES--- 296
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+F+ V+K CA L R +H + KYGF D I AL+ AY++C ++ + ++
Sbjct: 297 ----SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 274 FDKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
F ++ ++VSW +++ + + +EA+ LFS M V+P+ T+ +L+A
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ +V + E V ++D ++G++ EA K+ + + D V WS +L
Sbjct: 413 SEVHAQVVKTNYERSSTVG-----TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML 466
Query: 390 GSCRKHGETRLA 401
+ GET A
Sbjct: 467 AGYAQTGETEAA 478
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 201/393 (51%), Gaps = 25/393 (6%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS- 116
L +A +LFD+ P R+ S+ +L+ G+++ G +E RLF ++ + + S+ S ++
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 117 ----CDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
CD L G+ +H +KF V V +L++ Y K S + KVF+ M+ RNV++W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
++I+ + A+ +E L LF ++Q EG P+ TF+ L A
Sbjct: 163 TTLISGY-------------ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
VH+++ K G + ++N+LI+ Y +CG++ ++ +FDK +V+WNS++
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 292 YALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
YA +G EAL +F +M V+ ++F S++ C++ ++ ++ S+++ +
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-GSCRKHGETRLAEL-AAT 406
Q A MV + +L+A +L +E+ + V W+ ++ G + G+ +L +
Sbjct: 330 QNIRTALMV-AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
K K + P + V ++ + +S S A++++
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVK 421
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/535 (38%), Positives = 316/535 (59%), Gaps = 26/535 (4%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY- 102
V L++MYAK G + DAR F+ +P +V+ + +IS YAQ E+ F LF L++
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359
Query: 103 FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
PNE+SL+SVL +C + GK +H A+K ++ ++V NAL++ Y+K + D +
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 419
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K+F ++ N +SWN+++ F L EEAL +F ++Q M
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLG-------------EEALSVFCEMQAAQMPCTQV 466
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+S VL+ACA + RHA +H I K F +DTVI N+LI YA+CG I + +VF +
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL 526
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
D++SWN+I+ YALHGQA +AL+LF MN V+ + TFV+LLS CS GLV G
Sbjct: 527 MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGL 586
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+F SM +HG+ P ++HY C+V LLGR GR+ +A + I ++P P +++W LL SC
Sbjct: 587 SLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCII 646
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H L +A K+ ++EP D +V +SN+Y +GS ++ L+RK M+ VRK PGLS
Sbjct: 647 HKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 706
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W+EI+ +H F+ G HP I LE L + GY+P+ ++ LHD+++E K L
Sbjct: 707 WVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRML 766
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
+ HSE+LAL + ++ + IRI+KN+R C+DCH + S ++ +EI+V
Sbjct: 767 WVHSERLALAYGLV----MTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 31/349 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A C G+ + +H H++ DLF N L+NMY K G L AR LFD M
Sbjct: 63 ARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRM 122
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLISCDYLH 121
P+RN+VS+ L+ +AQ G+ E LF L Q+ LA + +
Sbjct: 123 PERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAG 182
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G VH+ A K D + +V + LI+ YS S +A VF + ++ + W +M++ +
Sbjct: 183 G--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSE 240
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A +F+KM+ G P+ + VLKA L + +H
Sbjct: 241 NDCPENAFRVFSKMR-------------VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHG 287
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K + + + AL+ YA+CG I ++ F+ + Y D++ + ++ YA Q ++
Sbjct: 288 CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQ 347
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
A +LF + +V P+ + S+L AC++ +VQ F + NH +
Sbjct: 348 AFELFLRLMRSSVLPNEYSLSSVLQACTN--MVQLD---FGKQIHNHAI 391
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 161/357 (45%), Gaps = 34/357 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC + Q+H H I DLFV N L++ YAK +D + +F +
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIK--IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGK 123
N VSW ++ G++Q G EE +FC + P + + +SVL +C H
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H K + + + N+LI+ Y+K C +A KVF+++ R++ISWN++I+ +
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAK-CGYIRDALKVFQHLMERDIISWNAIISGYALH 544
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA-SAVHS 240
A A+ELF +M + + + TF +L C+ H S S
Sbjct: 545 GQAADALELFDRM-------------NKSNVESNDITFVALLSVCSSTGLVNHGLSLFDS 591
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQ-VFDKMTYHDLVSWNSILKAYALHGQAK 299
+ +G + ++ R G ++ + Q + D + + W ++L + +H
Sbjct: 592 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV- 650
Query: 300 EALQLFSN---MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV--VPQL 350
AL FS + ++P D T+V L + + AG + + + SM N GV VP L
Sbjct: 651 -ALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSM-RNIGVRKVPGL 705
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 5 TQI-YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
TQ+ Y+++ ACA +I+ A Q+H + + N D + N LI+ YAK GY+ DA
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN--NDTVIGNSLIDTYAKCGYIRDALK 521
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHG 122
+F + +R+++SW A+ISGYA HG A + LF + + N+ + ++L C G
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST-G 580
Query: 123 KLVHALAL 130
+ H L+L
Sbjct: 581 LVNHGLSL 588
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/587 (34%), Positives = 344/587 (58%), Gaps = 27/587 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + A NI+ A ++ + P +DL ++ A+ G +++AR FD+
Sbjct: 88 WTIMLTVLATFSNIEDA----KYHFDQMPE--RDLVAWTAMLAANAERGQMENARETFDQ 141
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
MP+RN+ SWT+L+S Y + G+ + R+F S+ ++ + +++ L G +V A
Sbjct: 142 MPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEW----NLVAWTAMLTGYSLSGDVVRA 197
Query: 128 LALKFSLDAHVYVA-NALINMYS-KSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
S+ +A A+++ Y+ ++F+ M R++ISW +M+AA L
Sbjct: 198 KRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLE 257
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
++ ELF +M +GM P+ TF +L AC+ L +H+ +A+
Sbjct: 258 ESKELFDRMPRH--------CALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAER 309
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
GF+ D V++NAL++ Y RCG++ +K VFD M D++SW+S++ A+A G+ EA++L+
Sbjct: 310 GFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELY 369
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M PD F+S+L ACS++G+V+ F S++ + V P L+HYACMVD+LGR
Sbjct: 370 HRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGR 429
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G++ +AE L+R MP P +++ +L +C+ + + E AA + +L+P +S ++ +
Sbjct: 430 AGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITL 489
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
+NIY + A IRK M+ ++K PG SWIE+ +RVHEF +G K HPQR+ I+ ++
Sbjct: 490 ANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEI 549
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
+ L Q+K GY +T + L D+EE+ KE L++HSEKLA+ F +++ + +RI
Sbjct: 550 QRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPP----GAPLRI 605
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+KN+R+C DCH K+ S + G+EI+VRD+NRFHHF++ +CSCNDYW
Sbjct: 606 VKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 186/422 (44%), Gaps = 53/422 (12%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSL 110
M+ + G ++ AR +FD + R+ SW ++S YA+ G+ +F + ++ SL
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRW------SL 54
Query: 111 AS--VLISCDYLHGKLVHALALKFSLDAHVYVANA--LINMYSKSCADEAWKVFENMEFR 166
S L+S L G A L ++ +A L + + S ++A F+ M R
Sbjct: 55 GSWTALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPER 114
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL----QREG----------M 212
++++W +M+AA A E F +M E LF + L R G
Sbjct: 115 DLVAWTAMLAANAERGQMENARETFDQMP--ERNLFSWTSLLSAYGRSGDVKAAGRVFDS 172
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF----EDDTVIANALIHAYARCGSIS 268
P+W L A ++T S + AK F E D + A++ AYA G +
Sbjct: 173 MPEWN-----LVAWTAMLTGYSLSG-DVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLR 226
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--------NVQPDSATFVSL 320
++++F +M DL+SW +++ A + +E+ +LF M + P+ TF++L
Sbjct: 227 YTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITL 286
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
L ACS G + EG K+ H+ + G L +V+ GR G + +A K++ +
Sbjct: 287 LDACSFLGALAEGRKI-HAAVAERGFDTDLVVSNALVNFYGRCGALGDA-KIVFDGMRRR 344
Query: 381 DSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQM------SNIYCLSGSFN 433
D + WS ++ + + G A EL L + D + F+ + S + SG F
Sbjct: 345 DVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFF 404
Query: 434 KA 435
++
Sbjct: 405 RS 406
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 313/553 (56%), Gaps = 26/553 (4%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFF 104
N LI K G L AR LFD+MP RNV +W A+++G G E+ + F ++ +
Sbjct: 112 NILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMH 171
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
P+EF L SV C D + G+ VHA ++ +D+ + V N+L +MY + C E V
Sbjct: 172 PDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAV 231
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
+ ++S+N+ IA A+E F+ M+ E +APD TF
Sbjct: 232 LRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVE-------------VAPDVVTF 278
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ C+ L VH+ + K G + + +L+H Y+RCG + S++V+D
Sbjct: 279 VSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCG 338
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
DL ++++ A HGQ +A++LF M +P+ TF++LL ACSH+GL EG +
Sbjct: 339 LDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEF 398
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F M + +G P + HY C+VDLLGR G + EAE LI MP+ D VIW LL +C+
Sbjct: 399 FELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQK 458
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+AE A ++ + +P DS +V +SNI S + +RK M+ +RK PG+SW+
Sbjct: 459 NFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWV 518
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
E + +VH+F +G K HP++ I + L+E++G+++ GY P+ ++ HD+E+E KE L H
Sbjct: 519 EHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTH 578
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+ FA +N E IR+MKN+R+C DCH +KL S + G+EIVVRD +RFH
Sbjct: 579 HSEKLAIAFAFLN----LPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFH 634
Query: 577 HFKDRICSCNDYW 589
HF+D CSC DYW
Sbjct: 635 HFRDGRCSCGDYW 647
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 321/559 (57%), Gaps = 26/559 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +++ Y + G +++ LF+EMP R+V+SWT++I G +G +EE +F +
Sbjct: 134 KDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKM 193
Query: 100 LQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
L+ P + A VL +C ++ G VH +K H +++ +LI Y+
Sbjct: 194 LRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKI 253
Query: 155 E-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
E A K+F +NV+ W +++ A+ ++AL +F + + G
Sbjct: 254 EHAHKIFNETLTKNVVKWTALLTAY-------------VWNNKHQDALRVFGDMTKMGAL 300
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ TFSI LKAC GL +H++ K G E D + N+L+ Y CG+++ + V
Sbjct: 301 PNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAV 360
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F + D+VSWNSI+ A HG AL F+ M V P+ TF LLSACS +G++
Sbjct: 361 FRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGML 420
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+G F + V + HYACMVD+LGR G++ EAE+L+R MP++ +S+IW LL
Sbjct: 421 LKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLS 480
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR H +AE AA + LEP S +V +SNIY +G + +R +MK + K
Sbjct: 481 ACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQ 540
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG SW+ + + HEF S + HP E I++KL+ L +LK GYVP+ ALHD+E+E K
Sbjct: 541 PGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQK 600
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE L HSE+LA+ F +++ E S I +MKN+R+C DCH+ +KL S ++G++IVVR
Sbjct: 601 EEMLSFHSERLAIAFGLVST----VEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVR 656
Query: 571 DSNRFHHFKDRICSCNDYW 589
DS RFHHFK+ ICSC+DYW
Sbjct: 657 DSGRFHHFKNGICSCSDYW 675
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 187/394 (47%), Gaps = 29/394 (7%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TL + +L ++K +I + P +L + +I Y + L DA LFD M
Sbjct: 12 TLSYTTSLANHLKNQRLDQARLIFDKIPSP-NLHLYTKMIAGYTRNDRLCDALKLFDRMS 70
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALA 129
R+VVSW ++I G GN RLF + P + ++ + YL V LA
Sbjct: 71 VRDVVSWNSMIKGCLDCGNLGMATRLFDEM-----PEKNVISWTTMVNGYLKFGRVE-LA 124
Query: 130 LKFSLDAH---VYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ LD H V NA+++ Y ++ +E ++FE M R+VISW SMI
Sbjct: 125 QRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIG--------- 175
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
++L K EEALF+F+++ R G+ P W TF+ VL ACA V VH + K
Sbjct: 176 -GLDLNGK---SEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKL 231
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G I+ +LI YA C I + ++F++ ++V W ++L AY + + ++AL++F
Sbjct: 232 GCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVF 291
Query: 306 SNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+M P+ +TF L AC + +G ++ H+M G+ + +V +
Sbjct: 292 GDMTKMGALPNQSTFSITLKACCGLEALDKGKEI-HTMAIKLGLETDVFVGNSLVVMYTE 350
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G + A + R + E D V W+ ++ +HG
Sbjct: 351 CGNVNSAVAVFRNIN-EKDIVSWNSIIVGSAQHG 383
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 340/639 (53%), Gaps = 77/639 (12%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA + Q ++H + I N D FV N LI+ YAK G ++DA +F+ M
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRN--GTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322
Query: 71 RNVVSWTALISGYAQHGNAEECFRLF--------------------------CS------ 98
++VVSW A+++GY Q GN F LF CS
Sbjct: 323 KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382
Query: 99 ----LLQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSL------------DAHV 138
+L PN ++ S+L +C L G +HA +LK L +
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDL 442
Query: 139 YVANALINMYSKSCADEAWK-VFENMEFR--NVISWNSMIAAFRACKLEAQAIELFAKMK 195
V NALI+MYSK + +A + +F+++ R NV++W MI + A+++F++M
Sbjct: 443 MVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV--I 253
++ A+ AP+ T S +L ACA L R +H+ + ++ + +V +
Sbjct: 503 SKPYAV-----------APNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFV 551
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
AN LI Y++CG + ++ VFD M + VSW S++ Y +HG+ KEAL +F M
Sbjct: 552 ANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGF 611
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
PD +F+ LL ACSH+G+V +G F M ++ VV +HYAC++DLL R GR+ +A
Sbjct: 612 VPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAW 671
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
K I+EMPMEP +VIW LL +CR H LAE A KL ++ + + +SNIY +
Sbjct: 672 KTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANAR 731
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ IR+ MK S ++K PG SW++ + F G + HP I+ LE LIG++K
Sbjct: 732 RWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK 791
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
MGYVPET+ ALHD+++E K L HSEKLAL + ++ C IRI KN+R+C
Sbjct: 792 VMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCP----IRITKNLRVCG 847
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH+ S ++ EI+VRDS+RFHHFK+ CSC YW
Sbjct: 848 DCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 201/419 (47%), Gaps = 58/419 (13%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKR---NVVSWTALISGYAQHGNAEECFRLF 96
++FV N L+ MY++ G L+DA +FDE+ ++ +V+SW ++++ + + N LF
Sbjct: 182 SNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELF 241
Query: 97 CSLLQYFF---PNE----FSLASVLISCDYLHG----KLVHALALKFSLDAHVYVANALI 145
+ NE S+ ++L +C L K +H+ A++ A +V NALI
Sbjct: 242 SEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALI 301
Query: 146 NMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------- 197
+ Y+K + ++A KVF MEF++V+SWN+M+ + A ELF M+ E
Sbjct: 302 DTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVI 361
Query: 198 ---------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+EAL F+Q+ +G P+ T +L ACA L +H+
Sbjct: 362 TWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYS 421
Query: 243 AKYGF------------EDDTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSI 288
K +D ++ NALI Y++C S ++ +FD + ++V+W +
Sbjct: 422 LKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVM 481
Query: 289 LKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
+ YA +G + +AL++FS M V P++ T +L AC+H ++ G ++ + +
Sbjct: 482 IGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRH 541
Query: 344 HGVVPQLDHYA-CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
H P + A C++D+ + G + A + MP + + V W+ ++ HG + A
Sbjct: 542 HEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEA 599
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 174/349 (49%), Gaps = 55/349 (15%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINN----------FPNEPQDLFVTNHLINMYAKFGYLD 59
+L ACA G + Q M++H + + + +DL V N LI+MY+K
Sbjct: 400 SLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFK 459
Query: 60 DARHLFDEMPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF---PNEFSLASVL 114
AR +FD +P+ RNVV+WT +I GYAQ+G++ + ++F ++ + PN ++++ +L
Sbjct: 460 AARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCIL 519
Query: 115 ISCDYLH----GKLVHALALK-FSLDAHVY-VANALINMYSKSCA--DEAWKVFENMEFR 166
++C +L GK +HA + + VY VAN LI+MYSK C D A VF++M R
Sbjct: 520 MACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSK-CGDVDTARNVFDSMPKR 578
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
N +SW SM++ + +EAL +F ++Q+ G PD +F ++L AC
Sbjct: 579 NEVSWTSMMSG-------------YGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYAC 625
Query: 227 AGLVTERHASAVHSLIAKYGF--EDDTVIANA-----LIHAYARCGSISLSKQVFDKMTY 279
+ H+ V + + D V+A+A +I ARCG + + + +M
Sbjct: 626 S------HSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPM 679
Query: 280 H-DLVSWNSILKAYALHGQ---AKEALQLFSNMNVQPD-SATFVSLLSA 323
V W ++L A +H A+ AL NM + D S T +S + A
Sbjct: 680 EPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYA 728
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 183/413 (44%), Gaps = 66/413 (15%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PN 106
++ Y G DA + + + V W L+ + + G+ + + C +L+ P+
Sbjct: 89 VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148
Query: 107 EFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFE 161
F+L L +C Y G+ +H L +++V+V NAL+ MYS+ + ++A VF+
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFD 208
Query: 162 NMEFR---NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+ + +VISWNS++AA A+ELF++M ++ + + E D +
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEM-----SMIVHEKATNE--RSDIIS 261
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+L ACA L +HS + G D + NALI YA+CGS++ + +VF+ M
Sbjct: 262 IVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVME 321
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM------------------------------ 308
+ D+VSWN+++ Y G A +LF NM
Sbjct: 322 FKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALD 381
Query: 309 --------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN-----------HGVVPQ 349
+P+S T +SLLSAC+ G + +G ++ L+ G
Sbjct: 382 AFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGED 441
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMP-MEPDSVIWSVLLGSCRKHGETRLA 401
L Y ++D+ + A + +P E + V W+V++G ++G++ A
Sbjct: 442 LMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDA 494
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 335/591 (56%), Gaps = 29/591 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A++ CA G+I A +H ++I + +LFV+N LINMYAKFG L DA+ +F +M
Sbjct: 277 ASILPVCAQLGDISTATLIHLYVIKH--GLEFELFVSNALINMYAKFGNLGDAQKVFQQM 334
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLI----SCDYLHGK 123
R+VVSW ++I+ Y Q+ + F + L P+ +L S+ S DY + +
Sbjct: 335 FLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSR 394
Query: 124 LVHALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH ++ L V + NA+++MY+K D A KVF + ++V+SWN++I+ +
Sbjct: 395 SVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQN 454
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L ++AIE++ M+ E + + T+ +L A A + + +H
Sbjct: 455 GLASEAIEVYRMMEECRE------------IKLNQGTWVSILAAYAHVGALQQGMRIHGH 502
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K D + LI Y +CG + + +F ++ V WN+I+ + +HG ++A
Sbjct: 503 LIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKA 562
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+LF M V+PD TF+SLLSACSH+GLV EG FH M E +G+ P L HY CMVD
Sbjct: 563 LKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVD 621
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G + A I++MP+ PD+ IW LLG+CR HG L + A+ +L +++ +
Sbjct: 622 LLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGY 681
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SNIY G + +R + ++K PG S IE+ RV F +G + HP+ + I
Sbjct: 682 YVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEI 741
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +L L ++K +GY+P+ S L D+EE+ KE L HSE+LA+ F I++ +S
Sbjct: 742 YAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS----TPPKS 797
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI KN+R+C DCHN K S + +EIVVRDS RFHHFK+ ICSC DYW
Sbjct: 798 AIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 198/396 (50%), Gaps = 26/396 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +LF +C K + H + + Q F++ L+N+YA G + +R FD+
Sbjct: 79 FNSLFDSCT-----KTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQ 133
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCDYL-HGKL 124
+ +++V +W ++IS Y ++G+ E F LL F + ++ VL +C L G+
Sbjct: 134 IQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRK 193
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H K V+VA +LI+MYS+ A +F++M FR++ SWN+MI+
Sbjct: 194 IHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGN 253
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
AQA+++ +M+ EG+ D T + +L CA L A+ +H +
Sbjct: 254 AAQALDVLDEMR-------------LEGINMDSVTVASILPVCAQLGDISTATLIHLYVI 300
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
K+G E + ++NALI+ YA+ G++ +++VF +M D+VSWNSI+ AY + A
Sbjct: 301 KHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARG 360
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F M ++PD T VSL S + + + V ++ ++ + ++D+
Sbjct: 361 FFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMY 420
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++G I A K+ +P++ D V W+ L+ ++G
Sbjct: 421 AKLGVIDSAHKVFNLIPVK-DVVSWNTLISGYTQNG 455
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ A A G ++Q M++H H+I N D+FV LI++Y K G L DA LF +
Sbjct: 480 WVSILAAYAHVGALQQGMRIHGHLIKT--NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQ 537
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDY 119
+P+ + V W A+IS + HG+ E+ +LF + + P+ + S+L +C +
Sbjct: 538 VPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSH 590
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/615 (35%), Positives = 334/615 (54%), Gaps = 42/615 (6%)
Query: 13 HACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD---ARHLFDEMP 69
+ C + ++ QL F P++ M A + DD AR L D +
Sbjct: 185 YVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLT 244
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH------- 121
V+W A+ISGY + G EE F F + +E++ S++ +C +
Sbjct: 245 YPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFN 304
Query: 122 -GKLVHALALKFSLDAH----VYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
G+ VH L+ ++ + V NALI Y+K EA +VF+ M R++ISWN+++
Sbjct: 305 CGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVL 364
Query: 176 AAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWC 217
+ + + +A +F++M EE L LF Q++ EG+ P
Sbjct: 365 SGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDY 424
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
F+ + AC+ L + + +HS + + G + NALI Y+RCG + ++ VF M
Sbjct: 425 AFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTM 484
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
Y D VSWN+++ A A HG +A++LF M ++ PD TF+++L+AC+HAGL++EG
Sbjct: 485 PYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGR 544
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
F +M +G+ P DHYA ++DLL R G L+A+ +I+ MP E + IW LL CR
Sbjct: 545 HYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRI 604
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG L AA +L +L PG ++ +SN+Y G +++ +R M+ V+K PG S
Sbjct: 605 HGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCS 664
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W+E+EN VH F RHP+ +A++ L++L+ ++K +GYVP+T LHD+E EHKE L
Sbjct: 665 WVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSL 724
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+V+ IM + IR+ KN+RIC DCHN K S ++ +EIVVRD R
Sbjct: 725 STHSEKLAVVYGIMK----LPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKR 780
Query: 575 FHHFKDRICSCNDYW 589
FHHFK+ CSC +YW
Sbjct: 781 FHHFKNGECSCGNYW 795
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 210/532 (39%), Gaps = 133/532 (25%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+TQI A HA L K PN F+ N LIN+Y K + AR
Sbjct: 19 TTQIIARAVHAHILTSGFK-------------PNT----FILNRLINIYCKSSNITYARK 61
Query: 64 LFDEMPKRNVVSWTALISGYAQHGN---AEECF--------------------------- 93
LFD++PK ++V+ T L+S Y+ GN A++ F
Sbjct: 62 LFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGH 121
Query: 94 ---RLFCSLLQY-FFPNEFSLASV-----LISCDYLHGKLVHALALKFSLDAHVYVANAL 144
LF + +Y F P+ F+ +SV LI+ + H +++H +K V NAL
Sbjct: 122 AALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNAL 181
Query: 145 INMY----------SKSCADEAWKVFENMEFRNVI--SWNSMIAAFRACKLEAQAIEL-- 190
++ Y S A KVF+ + SW +MIA + A EL
Sbjct: 182 LSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLD 241
Query: 191 ----------------FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ + EEA FR++ G+ D T++ ++ AC G E+
Sbjct: 242 GLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC-GSCNEKM 300
Query: 235 -----ASAVHSLIAKYGFEDD----TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
VH I + E + NALI Y + + +++VFDKM D++SW
Sbjct: 301 GMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISW 360
Query: 286 NSILKAY-------------------------------ALHGQAKEALQLFSNM---NVQ 311
N++L Y A +G +E L+LF+ M ++
Sbjct: 361 NAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLE 420
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P F ++ACS G + G ++ HS + G L ++ + R G + AE
Sbjct: 421 PCDYAFAGAITACSVLGSLDNGQQI-HSQVIRLGHDSGLSAGNALITMYSRCGVVESAES 479
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGE-TRLAELAATKLKQLEPGDSLGFVQM 422
+ MP DSV W+ ++ + +HG + EL +K+ D + F+ +
Sbjct: 480 VFLTMPY-VDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTI 530
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 145/352 (41%), Gaps = 81/352 (23%)
Query: 115 ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNS 173
+S + + VHA L + ++ N LIN+Y KS A K+F+ + ++++ +
Sbjct: 17 VSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTT 76
Query: 174 MIAAFRA---CKLEAQ-----------------AIELFAKMKNEEEALFLFRQLQREGMA 213
+++A+ + KL Q I ++ + AL LF Q++R G
Sbjct: 77 LLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFL 136
Query: 214 PDWCTFSIVLKACAGLVT-ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL--- 269
PD TFS VL A + + ERH +H + K G + NAL+ Y C S L
Sbjct: 137 PDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKS 196
Query: 270 ---------------------------------------SKQVFDKMTYHDLVSWNSILK 290
++++ D +TY V+WN+++
Sbjct: 197 SQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMIS 256
Query: 291 AYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG-- 345
Y G +EA F +M +Q D T+ SL+SAC G E +F+ + HG
Sbjct: 257 GYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMFNCGRQVHGYI 313
Query: 346 ---VVPQLDHYA-----CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
VV H+ ++ + R++EA ++ +MP+ D + W+ +L
Sbjct: 314 LRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVL 364
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A AC++ G++ Q+H +I L N LI MY++ G ++ A +F
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIR--LGHDSGLSAGNALITMYSRCGVVESAESVFLT 483
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY 119
MP + VSW A+I+ AQHG+ + LF +++ P+ + ++L +C++
Sbjct: 484 MPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNH 536
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 325/559 (58%), Gaps = 28/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV + LI+MYA + A+ LFD + + VV W A+I+ Y ++GN E +F +L
Sbjct: 153 DRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGML 212
Query: 101 QYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ +E +L SV+ +C D GK V + L + + ALI+MY+K C +
Sbjct: 213 EVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAK-CGEL 271
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A ++F+ M+ R+V++W++MI+ + + EAL LF ++Q +
Sbjct: 272 GKARRLFDGMQSRDVVAWSAMISGY-------------TQADQCREALALFSEMQLAEVE 318
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T VL ACA L VHS I + ++ AL+ YA+CG I + +
Sbjct: 319 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEA 378
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F+ M + +W +++K A +G+ +EAL+LFS+M +++P TF+ +L ACSH+ LV
Sbjct: 379 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLV 438
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG + F SM +++G+ P+ +HY C+VDLLGR G I EA + IR MP+EP++VIW LL
Sbjct: 439 EEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
SC H + E A ++ L P S ++ +SNIY G + A +IRKEMK + K
Sbjct: 499 SCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKT 558
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IE++ V EF + HPQ + I++K+EE+I ++K GY+P T+ +++E K
Sbjct: 559 PGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEK 618
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E + HHSEKLA+ F +M + IR+ KN+R+C DCH+ KL S + +EIVVR
Sbjct: 619 EVSVSHHSEKLAIAFGLMKLDP----GATIRLSKNLRVCTDCHSATKLISKVYNREIVVR 674
Query: 571 DSNRFHHFKDRICSCNDYW 589
D NRFHHFKD CSCNDYW
Sbjct: 675 DRNRFHHFKDGTCSCNDYW 693
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 8/224 (3%)
Query: 198 EEALFLFRQ-LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
E+AL LF + L + PD T + LK+C+ + T + + K G D + ++
Sbjct: 100 EDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSS 159
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
LIH YA C ++ ++ +FD + + +V WN+I+ AY +G E +++F M V D
Sbjct: 160 LIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFD 219
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T VS+++AC G + G K ++ G+V + ++D+ + G + +A +L
Sbjct: 220 EITLVSVVTACGRIGDAKLG-KWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLF 278
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETR--LAELAATKLKQLEPGD 415
M D V WS ++ + + R LA + +L ++EP D
Sbjct: 279 DGM-QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPND 321
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/593 (36%), Positives = 342/593 (57%), Gaps = 26/593 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S ++ T C+ + QLH ++ N QD + L+ Y+K +D+A
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD--IRTALMVTYSKCSSVDEAFK 362
Query: 64 LFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH 121
LF NVV+WTA+I G+ Q+ N ++ LFC + + PN F+ ++VL
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL 422
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRA 180
+HA +K + VA AL++ Y K+ E+ +VF ++ +++++W++M+
Sbjct: 423 LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGL-- 480
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG-LVTERHASAVH 239
A+ ++ E+A+ +F QL +EG+ P+ TFS V+ AC+ T H +H
Sbjct: 481 -----------AQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K G + +++AL+ Y++ G+I +++VF + D+VSWNS++ Y HG AK
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589
Query: 300 EALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL++F M Q D TF+ +L+AC+HAGLV+EG K F+ M++++ + + +HY+CM
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCM 649
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDL R G +A +I MP IW LL +CR H L +LAA KL L+P D+
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+G+V +SNI+ ++G++ + +RK M +V+K G SWIEI+NR+ F +G HP +
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSD 769
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
++ KLEEL +LK MGY P+T+ HD+EEEHKE L HSE+LA+ + ++
Sbjct: 770 LVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLI----ALPP 825
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+I KN+RIC DCHN ++L S + + ++VRDSNRFHHFK +CSC YW
Sbjct: 826 GAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 189/382 (49%), Gaps = 32/382 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ V L++MY K +D R +FDEM +NVVSWT+L+SGYA++G +E L +
Sbjct: 137 EDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM 196
Query: 100 -LQYFFPNEFSLASVLISC---DYLHGKL-VHALALKFSLDAHVYVANALINMYSKS-CA 153
++ PN F+ A+VL + + G + VHA+ +K + +V NALI MY KS
Sbjct: 197 QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMV 256
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A VF++M R+ ++WN MI + A + ++F +M+ G+
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMR-------------LAGVK 303
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
F LK C+ +H + K G+E I AL+ Y++C S+ + ++
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363
Query: 274 FDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGL 329
F H++V+W +++ + + K+A+ LF M+ V+P+ T+ ++L+ + L
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
Q ++ + E VP + ++D + G ++E+ ++ +P + D V WS +L
Sbjct: 424 SQLHAQIIKAYYEK---VPSV--ATALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAML 477
Query: 390 GSCRKHGETRLAELAATKLKQL 411
+TR +E A QL
Sbjct: 478 TGL---AQTRDSEKAMEVFIQL 496
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 154/340 (45%), Gaps = 23/340 (6%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC-- 117
A LFDE P +++ + L+ ++++ + E LF L + +L+ L C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
D + G+ VH +LK V V +L++MY K+ ++ +F+ M +NV+SW S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
++ + A+ +E + L Q+Q EG+ P+ TF+ VL A A
Sbjct: 177 LSGY-------------ARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEG 223
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH++I K GFE T + NALI Y + + ++ VFD M D V+WN ++ YA
Sbjct: 224 GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAA 283
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G E Q+F M V+ F + L CS + ++ +++N Q
Sbjct: 284 IGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDI 343
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
A MV + + EA KL + V W+ ++G
Sbjct: 344 RTALMVT-YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/604 (34%), Positives = 334/604 (55%), Gaps = 30/604 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+ AC+ + ++H +++ + + + FV + L++MYA + AR +FD
Sbjct: 274 FASALPACSQLEMLSLGREMHAYVLKD-SDLAANSFVASALVDMYASHERVGVARRVFDM 332
Query: 68 MPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC---DYL 120
+P R + W A++ GYAQ G EE LF + P+E ++A VL +C +
Sbjct: 333 VPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETF 392
Query: 121 HGK-LVHALALKFSLDAHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAF 178
GK VH LK + + +V NAL+++Y++ EA + +F +E R+V+SWN++I
Sbjct: 393 AGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITG- 451
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA--------PDWCTFSIVLKACAGLV 230
C ++ + F ++ ++ +G+A P+ T +L CA L
Sbjct: 452 --CVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLA 509
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+H ++ + D + +AL+ YA+CG ++LS+ VFD++ ++++WN ++
Sbjct: 510 APAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIM 569
Query: 291 AYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
AY +HG EA+ LF M +P+ TF++ L+ACSH+G+V G ++FHSM NHGV
Sbjct: 570 AYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGV 629
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREM-PMEPDSVIWSVLLGSCRKHGETRLAELAA 405
P D +AC VD+LGR GR+ EA +I M P E WS LG+CR H L E+AA
Sbjct: 630 QPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAA 689
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
+L QLEP ++ +V + NIY +G + K+ +R M+ V K PG SWIE++ +H F
Sbjct: 690 ERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRF 749
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
+G HP+ + ++ L +++ GY P+TS LHDIEE K L +HSEKLA+ F
Sbjct: 750 MAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAF 809
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
++ + IR+ KN+R+C DCH K S ++G+EIV+RD RFHHF D CSC
Sbjct: 810 GLLRT----PPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSC 865
Query: 586 NDYW 589
DYW
Sbjct: 866 GDYW 869
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 198/430 (46%), Gaps = 49/430 (11%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L S + + L L +++ + H + N + + F N L++MYA+ G +DDA
Sbjct: 160 LSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 219
Query: 62 RHLFDEM-----PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLI 115
+ LF + P VV+W ++S Q G E + ++ + P+ + AS L
Sbjct: 220 QMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALP 279
Query: 116 SCDYLH----GKLVHALALKFS-LDAHVYVANALINMY-SKSCADEAWKVFENME--FRN 167
+C L G+ +HA LK S L A+ +VA+AL++MY S A +VF+ + R
Sbjct: 280 ACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQ 339
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
+ WN+M+ + ++ +A+ELFA+M+ E G+ P T + VL ACA
Sbjct: 340 LGLWNAMVCGYAQAGMDEEALELFARMEAE------------AGVVPSETTIAGVLPACA 387
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
T AVH + K G D+ + NAL+ YAR G + ++ +F + D+VSWN+
Sbjct: 388 RSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNT 447
Query: 288 ILKAYALHGQAKEALQLFSNMNVQ---------------------PDSATFVSLLSACSH 326
++ + G +A QL M Q P++ T ++LL C+
Sbjct: 448 LITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAM 507
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+G ++ H H + + + +VD+ + G + + + +P + + + W+
Sbjct: 508 LAAPAKGKEI-HGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITWN 565
Query: 387 VLLGSCRKHG 396
VL+ + HG
Sbjct: 566 VLIMAYGMHG 575
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 172/374 (45%), Gaps = 36/374 (9%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V N L+ YA+ G L A LF+ MP R+ V++ +LI+ +L
Sbjct: 98 VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG 157
Query: 104 FP-NEFSLASVLISCDYLH-----GKLVHALALKFS-LDAHVYVA-NALINMYSK-SCAD 154
P + F+L SVL++C +L G+ HA ALK LD A NAL++MY++ D
Sbjct: 158 HPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 217
Query: 155 EAWKVFENMEFRN-----VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+A +F +++ + V++WN+M++ +AIE+ M
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVA------------- 264
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK-YGFEDDTVIANALIHAYARCGSIS 268
G+ PD TF+ L AC+ L +H+ + K ++ +A+AL+ YA +
Sbjct: 265 RGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVG 324
Query: 269 LSKQVFDKMT--YHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLS 322
++++VFD + + L WN+++ YA G +EAL+LF+ M V P T +L
Sbjct: 325 VARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLP 384
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC+ + G + H + G+ ++DL R+G +EA + I D
Sbjct: 385 ACARSETFA-GKEAVHGYVLKRGMADNPFVQNALMDLYARLGD-MEAARWIFAAIEPRDV 442
Query: 383 VIWSVLLGSCRKHG 396
V W+ L+ C G
Sbjct: 443 VSWNTLITGCVVQG 456
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/578 (37%), Positives = 329/578 (56%), Gaps = 36/578 (6%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G +K+A +L + + EP + L+ +G ++ A F++MP +++ SW
Sbjct: 119 GKVKEAHELFDKI-----PEPDSVSYNIMLVCYLRSYG-VEAALAFFNKMPVKDIASWNT 172
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVHALALKFSLD-A 136
LISG+AQ+G ++ F LF + P + ++ S +IS HG L A L ++
Sbjct: 173 LISGFAQNGQMQKAFDLFSVM-----PEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMK 227
Query: 137 HVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKM 194
V V A++ Y K E A ++F+ M +N+++WNSMIA + C+
Sbjct: 228 SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCR------------ 275
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
E+ L +F+ + + P+ + S VL C+ L +H L++K DT
Sbjct: 276 --AEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTAC 333
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
+LI Y +CG + + ++F +M D++SWN+++ YA HG ++AL LF M ++
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
PD TFV+++ AC+HAG V G + F SM + G+ + HY C++DLLGR GR+ EA
Sbjct: 394 PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVS 453
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
LI+EMP +P + I+ LLG+CR H LAE AA L L+P + G+VQ++NIY +
Sbjct: 454 LIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNK 513
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG 491
+++ +RK MK V K PG SWIEI++ HEF S + HP+ +I KKL EL G++K
Sbjct: 514 WDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKL 573
Query: 492 MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GYVP+ ALHD+EEEHKE+ L HSEKLA+ F +M + IR+ KN+R+C D
Sbjct: 574 AGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAP----GTPIRVFKNLRVCGD 629
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH +K S + +EI+VRD+ RFHHF++ CSC DYW
Sbjct: 630 CHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA-LHGQAKEALQLFSNM 308
D V N I ++ R + ++ VF+KM+ V+WN++L Y + G+ KEA +LF +
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+PDS ++ +L + V+ F+ M V + + ++ + G++ +
Sbjct: 132 P-EPDSVSYNIMLVCYLRSYGVEAALAFFNKM-----PVKDIASWNTLISGFAQNGQMQK 185
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
A L MP E + V WS ++ +HG+ AE
Sbjct: 186 AFDLFSVMP-EKNGVSWSAMISGYVEHGDLEAAE 218
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/589 (35%), Positives = 325/589 (55%), Gaps = 59/589 (10%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVV--------------------------- 74
LFV + L++MYAK G+++DA +F+E+P++N+V
Sbjct: 173 LFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPE 232
Query: 75 ----SWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLV 125
SWT +I+G Q+G +E F + ++ F ++F+ SVL +C GK +
Sbjct: 233 KDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQI 292
Query: 126 HALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAFRACKL 183
HA ++ +++V +AL++MY K C + + VF M +NVISW +M+ +
Sbjct: 293 HAYIIRTDYQDNIFVGSALLDMYCK-CRNVKYAEAVFRKMRHKNVISWTAMLVGY----- 346
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+ EEA+ +F +QR + PD T V+ +CA L + + H
Sbjct: 347 --------GQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQAL 398
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
G ++NALI Y +CGS+ + Q+F +M D VSW +++ YA G+A E +
Sbjct: 399 ASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETIS 458
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M + PD TFV +LSACS AGLV++G F M++ H + P DHY CM+DLL
Sbjct: 459 LFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLL 518
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R GR+ EA+ I +MP PD++ W+ LL SCR +G + + AA L +LEP + ++
Sbjct: 519 SRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYI 578
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+S+IY G ++ +RK M+ V+K PG SWI+ +N+VH F++ + P + I+
Sbjct: 579 LLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYA 638
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
KLE L ++ GYVP+ S LHD+E+ K + L HHSEKLA+ F ++ + I
Sbjct: 639 KLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLL----FIPDGLQI 694
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R++KN+R+C DCHN K S + +EI+VRD+ RFH FKD +CSC D+W
Sbjct: 695 RVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 221/422 (52%), Gaps = 38/422 (9%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQ-DLFVTNHLINMYAKFGYLDDARH 63
T +Y L + G++K A + +H+ PQ +LF N L++ Y+K GYL D +
Sbjct: 40 TFLYNNLINTYGKLGDLKNARNVFDHI-------PQPNLFSWNTLLSAYSKLGYLQDMQR 92
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDYLH 121
+FD MP +VVSW +L+SGYA +G E R++ +L+ N + +++LI
Sbjct: 93 VFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRG 152
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIA 176
G+ +H KF ++++V + L++MY+K+ ++A ++FE + +N++ +N+MI
Sbjct: 153 FVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMIT 212
Query: 177 AFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCT 218
C+ +A +LF M ++ EA+ F+++ EG D T
Sbjct: 213 GLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFT 272
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F VL AC G + +H+ I + ++D+ + +AL+ Y +C ++ ++ VF KM
Sbjct: 273 FGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMR 332
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNK 335
+ +++SW ++L Y +G ++EA+++F +M + PD T S++S+C++ ++EG +
Sbjct: 333 HKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQ 392
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
FH G++ + ++ L G+ G + A +L EM + D V W+ L+ +
Sbjct: 393 -FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR-DEVSWTALVSGYAQF 450
Query: 396 GE 397
G+
Sbjct: 451 GK 452
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 71/259 (27%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
++ LK C +H I + +T + N LI+ Y + G + ++ VFD +
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+L SWN++L AY+ G ++ ++F +M D ++ SLLS + GL+ E +V++
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMP-NHDVVSWNSLLSGYAGNGLISESVRVYN 126
Query: 339 SMLEN-----------------------------HGVV-------------PQLDHYA-- 354
ML++ HG + P +D YA
Sbjct: 127 MMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT 186
Query: 355 ----------------------CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
M+ L R I+EAE+L MP E DS+ W+ ++
Sbjct: 187 GFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMP-EKDSISWTTIITGL 245
Query: 393 RKHGETRLAELAATKLKQL 411
++G L + A K K++
Sbjct: 246 TQNG---LFKEAVDKFKEM 261
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/561 (36%), Positives = 314/561 (55%), Gaps = 27/561 (4%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
+ ++ + N L+ G ++DA LF M K + VSW A+I G AQ+G A+E F
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 98 SL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-S 151
+ +Q +++ SVL +C L GK +HA ++ + H+YV +ALI+MY K
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
C A VF+ M+ +NV+SW +M+ + + EEA+ +F +QR G
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGY-------------GQTGRAEEAVKIFLDMQRSG 366
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ PD T + ACA + + S H G ++N+L+ Y +CG I S
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
++F++M D VSW +++ AYA G+A E +QLF M ++PD T ++SACS AG
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV++G + F M +G+VP + HY+CM+DL R GR+ EA + I MP PD++ W+ L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +CR G + + AA L +L+P G+ +S+IY G ++ +R+ M+ V+
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PG SWI+ + ++H F++ + P + I+ KLEEL ++ GY P+TS HD+EE
Sbjct: 607 KEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEA 666
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K + L +HSE+LA+ F ++ IR+ KN+R+CVDCHN K S + G+EI+
Sbjct: 667 VKVKMLNYHSERLAIAFGLI----FVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREIL 722
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+ RFH FKD CSC D+W
Sbjct: 723 VRDAVRFHRFKDGTCSCGDFW 743
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 216/428 (50%), Gaps = 33/428 (7%)
Query: 1 FLHSTQIYATLFHACALHGNIKQA---MQLHEHMINNFPNEPQ-DLFVTNHLINMYAKFG 56
+H I A + L+ NI A M+ + F PQ +LF N+L+ Y+K G
Sbjct: 27 MIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAG 86
Query: 57 YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN--EFSLASVL 114
+ + F+++P R+ V+W LI GY+ G + + ++++ F N +L ++L
Sbjct: 87 LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTML 146
Query: 115 -ISCDYLH---GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVI 169
+S H GK +H +K ++++ V + L+ MY+ C +A KVF ++ RN +
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNE-----------------EEALFLFRQLQREGM 212
+NS++ AC + A++LF M+ + +EA+ FR+++ +G+
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D F VL AC GL +H+ I + F+D + +ALI Y +C + +K
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD+M ++VSW +++ Y G+A+EA+++F +M + PD T +SAC++
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++EG++ FH G++ + +V L G+ G I ++ +L EM + D+V W+ ++
Sbjct: 387 LEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMV 444
Query: 390 GSCRKHGE 397
+ + G
Sbjct: 445 SAYAQFGR 452
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
ACA ++++ Q H I + + V+N L+ +Y K G +DD+ LF+EM R+
Sbjct: 380 ACANVSSLEEGSQFHGKAITS--GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVHALALKF 132
VSWTA++S YAQ G A E +LF ++Q+ P+ +L V+ +C LV F
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS--RAGLVEKGQRYF 495
Query: 133 SLDAHVYVA-------NALINMYSKSCA-DEAWKVFENMEF-RNVISWNSMIAAFR 179
L Y + +I+++S+S +EA + M F + I W ++++A R
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 219 FSIVLKACAGLVTE---RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+S+ +K C GL R+ +H I + +T + N ++HAYA S + +++VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNK 335
++ +L SWN++L AY+ G E F + + D T+ L+ S +GLV K
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR-DGVTWNVLIEGYSLSGLVGAAVK 124
Query: 336 VFHSMLEN 343
+++M+ +
Sbjct: 125 AYNTMMRD 132
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/511 (40%), Positives = 297/511 (58%), Gaps = 30/511 (5%)
Query: 105 PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKV 159
PN+F+L++V+ +C + GK H +K ++ V V AL++MY++ + ++A V
Sbjct: 8 PNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHV 67
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EAL 201
F+ M R+ +WN+MI + +A++LF +M + E+L
Sbjct: 68 FDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESL 127
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
+F Q+++ GM D VL ACA L H+ + + GF D V+ +AL+ Y
Sbjct: 128 NVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMY 187
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
A+ GS+ + QVFDKM + VSWNSI+ A HG+ +A+ LF M ++P+ +FV
Sbjct: 188 AKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFV 247
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+LSACSH GLV EG F+ M +N+G+VP + HY CM+DLLGR G + EAE I MP+
Sbjct: 248 GVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPV 307
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
EPD +W LLG+CR HG T LA+ A L +E + +V +SNIY +G ++ A +
Sbjct: 308 EPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKV 367
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
RK MK V K PG SWIE++ +H F +G HPQ + I + LE L ++K GYVP
Sbjct: 368 RKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNK 427
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
+ L D+E++ KE L HHSEKLA+ F I+N + IR+ KN+R+C DCH +K
Sbjct: 428 NFVLQDVEDDEKELSLSHHSEKLAIAFGIIN----TNPGTTIRVAKNLRVCGDCHTVIKF 483
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++IVVRD+NRFHHFKD CSC DYW
Sbjct: 484 ISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 183/385 (47%), Gaps = 63/385 (16%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD- 66
+T+ ACA +++Q Q H ++I F + D+ V L++MYA+ G L+DA H+FD
Sbjct: 14 STVVKACASIASLEQGKQAHNYIIKMGFES---DVVVQTALVHMYARCGSLEDAGHVFDK 70
Query: 67 ------------------------------EMPKRNVVSWTALISGYAQHGNAEECFRLF 96
EM +R+VVSWTA+I+GYAQ+G +E +F
Sbjct: 71 MSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVF 130
Query: 97 CSLLQYFFPNE-FSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKS 151
+ + ++ F + SVL +C L G+ HA ++ + V +AL++MY+KS
Sbjct: 131 NQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKS 190
Query: 152 CA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ ++A +VF+ M RN +SWNS+I C A+ +A+ LF Q+ +
Sbjct: 191 GSMEDACQVFDKMPQRNEVSWNSIIT---GC----------AQHGRGNDAVLLFEQMLQA 237
Query: 211 GMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G+ P+ +F VL AC+ GLV E + + YG D +I R G +
Sbjct: 238 GIKPNEISFVGVLSACSHTGLVNEGRGY-FNLMTQNYGIVPDVSHYTCMIDLLGRAGCLD 296
Query: 269 LSKQVFDKMTYH-DLVSWNSILKAYALHGQ---AKEALQLFSNMNVQPDSATFVSLLSAC 324
++ + M D+ W ++L A +HG AK + M VQ + +V L +
Sbjct: 297 EAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQI-AGIYVLLSNIY 355
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQ 349
+ AG + KV ++++ GV+ Q
Sbjct: 356 AAAGQWDDAAKV-RKLMKDRGVMKQ 379
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 39/263 (14%)
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+G+ P+ T S V+KACA + + H+ I K GFE D V+ AL+H YARCGS+
Sbjct: 4 KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63
Query: 270 SKQVFDKM------------TYH-------------------DLVSWNSILKAYALHGQA 298
+ VFDKM T H D+VSW +++ YA +G
Sbjct: 64 AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
E+L +F+ M ++ D S+LSAC+ ++ G + FH+ + G + +
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVVGSA 182
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEP 413
+VD+ + G + +A ++ +MP + + V W+ ++ C +HG A L ++ Q ++P
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKP 241
Query: 414 GDSLGFVQMSNIYCLSGSFNKAR 436
+ + FV + + +G N+ R
Sbjct: 242 -NEISFVGVLSACSHTGLVNEGR 263
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I ++ ACA ++ Q H +++ + D+ V + L++MYAK G ++DA +FD
Sbjct: 144 IMGSVLSACADLAALELGRQFHAYVVQS--GFALDIVVGSALVDMYAKSGSMEDACQVFD 201
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV 125
+MP+RN VSW ++I+G AQHG + LF +LQ PNE S VL +C H LV
Sbjct: 202 KMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACS--HTGLV 259
Query: 126 HALALKFSLDAHVYVANALINMYS--------KSCADEAWKVFENMEFRNVIS-WNSMIA 176
+ F+L Y ++ Y+ C DEA M +S W +++
Sbjct: 260 NEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLG 319
Query: 177 AFR 179
A R
Sbjct: 320 ACR 322
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 320/558 (57%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV +++ Y+K G+L DA +FD+M +NVVSWT +I G + G E LF LL
Sbjct: 138 DVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLL 197
Query: 101 QYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
+ P+ F + VL +C D G+ + + L +V+VA +L++MY+K + +
Sbjct: 198 ESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSME 257
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA VF+ M ++++ W++MI + + L +AIELF +M+ + + P
Sbjct: 258 EARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR-------------KVNVRP 304
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D L +CA L + L+ F + V+ +LI YA+CGS+ + V+
Sbjct: 305 DCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVY 364
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQ 331
M D V +N+++ A++GQ A +F M + P+ TFV LL C+HAGLV
Sbjct: 365 KMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVD 424
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G F+SM + V P ++HY CMVDLL R G + EA LI+ MPM+ + ++W LLG
Sbjct: 425 DGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGG 484
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR H ET+LAE +L +LEP +S +V +SNIY S +++A IR + ++K P
Sbjct: 485 CRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLP 544
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+E++ VHEF G HP + I++KLE L LK GY P T L D+EEE KE
Sbjct: 545 GYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKE 604
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L HSEKLA+ FA+++ G+ + VIR++KN+R+C DCH +K S + G+EIV+RD
Sbjct: 605 HFLGCHSEKLAVAFALISTGA----KYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRD 660
Query: 572 SNRFHHFKDRICSCNDYW 589
+NRFH F D CSC DYW
Sbjct: 661 NNRFHCFSDGACSCRDYW 678
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 5/205 (2%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A+ L+ + + + PD TFS VLKACA L +HSL+ K GF+ D + ++
Sbjct: 88 AVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVC 147
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
Y++CG + + +VFD M ++VSW ++ G+ +EA+ LF + ++PD
Sbjct: 148 FYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFV 207
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
V +L AC+ G ++ G + M E G+ + +VD+ + G + EA + + +
Sbjct: 208 IVRVLRACARLGDLESGRWIDRCMREC-GLSRNVFVATSLVDMYTKCGSMEEA-RFVFDG 265
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLA 401
+E D V WS ++ +G R A
Sbjct: 266 MVEKDIVCWSAMIQGYASNGLPREA 290
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 149/334 (44%), Gaps = 42/334 (12%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ + ACA G+++ + M +++FV L++MY K G +++AR +FD
Sbjct: 207 VIVRVLRACARLGDLESGRWIDRCMRE--CGLSRNVFVATSLVDMYTKCGSMEEARFVFD 264
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH---- 121
M ++++V W+A+I GYA +G E LF + + P+ +++ L SC L
Sbjct: 265 GMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALEL 324
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
G L ++ + +LI+ Y+K + +EA V++ M+ ++ + +N++I+
Sbjct: 325 GNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISG--- 381
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE------ 232
A A +F Q+ + G+ P+ TF +L C AGLV +
Sbjct: 382 ----------LAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFN 431
Query: 233 --RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSIL 289
H +V I YG ++ AR G + + + M +++ W S+L
Sbjct: 432 SMSHDFSVTPTIEHYG---------CMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLL 482
Query: 290 KAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
LH + + A + + ++P ++ LLS
Sbjct: 483 GGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLS 516
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/646 (34%), Positives = 356/646 (55%), Gaps = 73/646 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ +CA G + + ++H+ M D++V+NHL+ MY K G L++AR +F+ P
Sbjct: 40 VIQSCARLGALAEGRRIHQLM--RRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLH-GKL 124
+NV SWT LI+ AQHG ++E LF +L Q P+ S + + +C ++L G+
Sbjct: 98 KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF----- 178
+HAL ++ V +L++MYSK + +E+ + FE+M N +SWN+MIAAF
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRR 217
Query: 179 ----------------RACK---LEAQAIELFAK-----------MKNEE---------- 198
RAC + + ++AK +K +E
Sbjct: 218 GLEALRTLQKMFLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLI 277
Query: 199 ----------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
EA+ LFR++ G+ D TF +L AC V A+H+ + ++
Sbjct: 278 SAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLA 337
Query: 249 DD-TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ + N +++ Y +CGS+ ++ +F M+ D+++WN+++ AY HG EAL+ +
Sbjct: 338 SNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYEL 397
Query: 308 M---NVQPDSATFVSLLSA-CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M V PD T+VS++ A C++AGL +E + F SM ++HGV P HY CMV+ LG+
Sbjct: 398 MQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKA 457
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
GR+ +AE LI+ MP EPD + W+ L +CR HG+ + +LAA +++P S G+V ++
Sbjct: 458 GRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALA 517
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
I+ +G F +A IRK M +RK G S I++ V+EF +G + +P+ + IF +L+
Sbjct: 518 RIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELK 577
Query: 484 ELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIM 543
L ++K GY P+ + HD+E KE L+ HSE+LA+ F I++ + +RIM
Sbjct: 578 RLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSP----GTPLRIM 633
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+R+C DCH KL S + +EI+VRDSNRFHHFK+ CSC D+W
Sbjct: 634 KNLRVCGDCHTMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 679
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/576 (38%), Positives = 329/576 (57%), Gaps = 31/576 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D F+ + LI MYA G + DAR LFD+M R+VV+W +I GY+Q+ + + +L+ +
Sbjct: 150 DPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMK 209
Query: 100 LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
P+ L +VL +C + +GK +H ++ +L+NMY+ A
Sbjct: 210 TSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMH 269
Query: 156 -AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---------------- 198
A +V++ + ++++ +M++ + + A +F +M ++
Sbjct: 270 LAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQ 329
Query: 199 --EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
EAL LF ++QR + PD T V+ ACA + A +H+ K GF I NA
Sbjct: 330 PLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNA 389
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
LI YA+CG++ +++VF+ M +++SW+S++ A+A+HG A A+ LF M N++P+
Sbjct: 390 LIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPN 449
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
TF+ +L ACSHAGLV+EG K F SM+ H + PQ +HY CMVDL R + +A +LI
Sbjct: 450 GVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELI 509
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
MP P+ +IW L+ +C+ HGE L E AAT+L +LEP V +SNIY ++
Sbjct: 510 ETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWD 569
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
L+RK MK V K S IE+ N VH F + H Q + I+KKL+ ++ QLK +G
Sbjct: 570 DVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVG 629
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
Y P TS L D+EEE K+E + HSEKLAL + ++ + R+ S IRI+KN+RIC DCH
Sbjct: 630 YTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGE----RKESCIRIVKNLRICEDCH 685
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+FMKL S + EIV+RD RFHHF ICSC DYW
Sbjct: 686 SFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 158/330 (47%), Gaps = 54/330 (16%)
Query: 7 IYATLFHACALHGNIKQAMQLHE---------------HMINNFPN-------------- 37
I T+ ACA GN+ +H+ ++N + N
Sbjct: 219 ILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQL 278
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
+ + V+ +++ YAK G + DAR +FD M ++++V W+A+ISGYA+ E +LF
Sbjct: 279 PSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFN 338
Query: 98 SL-LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+ + P++ ++ SV+ +C + K +H A K + + NALI+MY+K C
Sbjct: 339 EMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAK-C 397
Query: 153 AD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ +A +VFENM +NVISW+SMI A FA + + A+ LF +++ +
Sbjct: 398 GNLVKAREVFENMPRKNVISWSSMINA-------------FAMHGDADSAIALFHRMKEQ 444
Query: 211 GMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ P+ TF VL AC AGLV E S+I ++ ++ Y R +
Sbjct: 445 NIEPNGVTFIGVLYACSHAGLVEEGQ-KFFSSMINEHRISPQREHYGCMVDLYCRANHLR 503
Query: 269 LSKQVFDKMTY-HDLVSWNSILKAYALHGQ 297
+ ++ + M + +++ W S++ A HG+
Sbjct: 504 KAMELIETMPFPPNVIIWGSLMSACQNHGE 533
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 5/213 (2%)
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ Q + F++ E L L+ L+R G D +F +LKA + L +H L
Sbjct: 81 RFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGL 140
Query: 242 IAKYGF-EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+K+GF D I +ALI YA CG I ++ +FDKM++ D+V+WN ++ Y+ +
Sbjct: 141 ASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDH 200
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
L+L+ M +PD+ ++LSAC+HAG + G K H ++++G +V
Sbjct: 201 VLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYG-KAIHQFIKDNGFRVGSHIQTSLV 259
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++ G + A ++ ++P + V ++L G
Sbjct: 260 NMYANCGAMHLAREVYDQLPSKHMVVSTAMLSG 292
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/608 (36%), Positives = 331/608 (54%), Gaps = 41/608 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ ACA ++K LH ++ DL N LI+MYAK G LD A+ +F
Sbjct: 281 YGSVLSACASTSDLKWGAHLHARILR--MEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKS 338
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC---DYLH-G 122
+ + + +SW +LI+G G E+ LF + + +EF L ++L C DY G
Sbjct: 339 LREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG 398
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+L+H +K + + V NA+I MY+K D+A VF M RN ISW +MI AF
Sbjct: 399 ELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRS 458
Query: 182 KLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVL 223
+A F M EE L L+ ++ G+ PDW TF+ +
Sbjct: 459 GDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSI 518
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
+ACA L + V + K+G + +AN+++ Y+RCG I +K FD + DL+
Sbjct: 519 RACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLI 578
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
SWN++L A+A +G + + F +M +P+ ++VS+LS CSH GLV EG F SM
Sbjct: 579 SWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSM 638
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
G+ P +H++CMVDLLGR G + +A+ LI MP +P++ +WS LLGSCR H + RL
Sbjct: 639 TRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRL 698
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
AE AA KL +L+ S G+V +SN+Y SG + +RK MK +R G SWIE++N
Sbjct: 699 AETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDN 758
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEK 520
RVH F HPQ + ++ KLEE++ ++ G ++H ++ +HSEK
Sbjct: 759 RVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSVHRSKK--------YHSEK 810
Query: 521 LALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
LA F ++N S I +MKN+R+C DCH +KL S + +E+++RD RFHHFKD
Sbjct: 811 LAFAFGLLNLPSWMP----IHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFKD 866
Query: 581 RICSCNDY 588
ICSC DY
Sbjct: 867 GICSCKDY 874
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 191/421 (45%), Gaps = 46/421 (10%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
++ C L + Q Q H +++F N +I + DA LFDEMP
Sbjct: 52 MYSNCGLTHDAFQVFQETHH---------RNIFTWNTMIRALVSSSRMSDAEKLFDEMPV 102
Query: 71 R--NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-----NEFSLASVLISCDYLHGK 123
R + VSWT +ISGY+Q+G F F +++ + FS SV+ +C L
Sbjct: 103 RVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDS 162
Query: 124 LV----HALALKFSLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAA 177
+ HAL K + N+++ MY K C D A VF ++E ++ WNSMI
Sbjct: 163 RLAIQLHALVSKLGFGMETCIQNSVVGMYVK-CGDVDLAETVFFDIERPSLFCWNSMIYG 221
Query: 178 FRACKLEAQAIELFAKMKNEEEA------------------LFLFRQLQREGMAPDWCTF 219
+ +A+++F +M +E L +F ++ +G +P++ T+
Sbjct: 222 YSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTY 281
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
VL ACA + + +H+ I + D V N LI YA+CG + L+K+VF +
Sbjct: 282 GSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLRE 341
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
HD +SWNS++ G ++AL LF+ M +V D ++L CS G ++
Sbjct: 342 HDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG-EL 400
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H G+ ++ + + G +A+ + R MP+ +++ W+ ++ + + G
Sbjct: 401 LHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFSRSG 459
Query: 397 E 397
+
Sbjct: 460 D 460
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/603 (36%), Positives = 340/603 (56%), Gaps = 46/603 (7%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHE-------HMINNFPNEPQDLFVTNHLINMYAKFG 56
+ YAT+ CA + A QLH H+ N V L + Y+K G
Sbjct: 301 TQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGN---------VMTALADAYSKCG 351
Query: 57 YLDDARHLFD-EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVL 114
L DA ++F RNVVSWTA+ISG Q+G+ LF + + PNEF+ +++L
Sbjct: 352 ELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML 411
Query: 115 ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
+ + +HA +K + V AL+ YSK ++A +F+ +E ++V++W++
Sbjct: 412 KASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA----GL 229
M++ A+ + E A +LF ++ +G+ P+ T S V+ ACA G+
Sbjct: 472 MLSCH-------------AQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGV 518
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
R H++ KY + D +++AL+ Y+R G+I ++ VF++ T DLVSWNS++
Sbjct: 519 DQGRQ---FHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMI 575
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA HG + +A++ F M +Q D TF++++ C+H GLV EG + F SM+ +H +
Sbjct: 576 SGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKI 635
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
P ++HYACMVDL R G++ E LIR+MP +++W LLG+CR H L + +A
Sbjct: 636 NPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSAD 695
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
KL LEP DS +V +SNIY +G + + +RK M +V+K G SWI+I+N+VH F
Sbjct: 696 KLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFI 755
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
+ K HP + I+KKL+ +I +LK GY P TS LHDI E+ KE L HSE+LAL F
Sbjct: 756 AFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFG 815
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
++ + ++I+KN+R+C DCH MK+ S + +EI++RD +RFHHF CSC
Sbjct: 816 LIAT----PPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCG 871
Query: 587 DYW 589
D+W
Sbjct: 872 DFW 874
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 154/286 (53%), Gaps = 23/286 (8%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPN 106
L++MY K G + + +F+ MPK+NVV+WT+L++G A E LF + + +PN
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPN 200
Query: 107 EFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
F+ ASVL + G+ VHA ++KF + V+V N+L+NMY+K ++A VF
Sbjct: 201 PFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFN 260
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
ME R+++SWN+++A + + E +A++LF E + + Q T++
Sbjct: 261 WMETRDMVSWNTLMAGLQLNECELEALQLF-----HESRATMGKMTQS--------TYAT 307
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YH 280
V+K CA L A +HS + K+GF + AL AY++CG ++ + +F T
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
++VSW +I+ +G A+ LFS M V P+ T+ ++L A
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 169/365 (46%), Gaps = 33/365 (9%)
Query: 61 ARHLFDEMPKRNV-VSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC- 117
AR+ DE+P+R+ V ++ YA+ G E F + + +L+ VL +C
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 118 ---DYLHGKLVHALALKFSLD-AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISW 171
D + G+ +H L +K D V +L++MY K C E +VFE M +NV++W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMK-CGSVCEGIEVFEGMPKKNVVTW 169
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
S++ ++ ++ + LF +M+ E G+ P+ TF+ VL A A
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAE-------------GIWPNPFTFASVLSAVASQGA 216
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
VH+ K+G + N+L++ YA+CG + +K VF+ M D+VSWN+++
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276
Query: 292 YALHGQAKEALQLF----SNMN--VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
L+ EALQLF + M Q AT + L + L ++ HS + HG
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQ----LHSCVLKHG 332
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ + D + G + +A + + V W+ ++ C ++G+ LA +
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 406 TKLKQ 410
+++++
Sbjct: 393 SRMRE 397
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 193/400 (48%), Gaps = 32/400 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ A A G + ++H + F +FV N L+NMYAK G ++DA+ +F+
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVK-FGCR-SSVFVCNSLMNMYAKCGLVEDAKSVFNW 261
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----G 122
M R++VSW L++G + E +LF S + + A+V+ C L
Sbjct: 262 METRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALA 321
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFE-NMEFRNVISWNSMIAAFR 179
+ +H+ LK V AL + YSK C + +A +F RNV+SW ++I+
Sbjct: 322 RQLHSCVLKHGFHLTGNVMTALADAYSK-CGELADALNIFSMTTGSRNVVSWTAIISGC- 379
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
++ I L A+ LF +++ + + P+ T+S +LKA ++ + +H
Sbjct: 380 ---IQNGDIPL---------AVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQ----IH 423
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K ++ + AL+ +Y++ GS + +F + D+V+W+++L +A G +
Sbjct: 424 AQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483
Query: 300 EALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
A LF+ M +Q P+ T S++ AC+ + + FH++ + + + +
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSAL 543
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
V + R G I ++ +++ E + D V W+ ++ +HG
Sbjct: 544 VSMYSRKGNI-DSAQIVFERQTDRDLVSWNSMISGYAQHG 582
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/590 (36%), Positives = 340/590 (57%), Gaps = 30/590 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ A A GN MQ+H + + N + DL V N L++MYAKF + +FD+MP
Sbjct: 424 SIIAASARSGNTLNGMQIHAYAMKNGLD--SDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 481
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GKL 124
++VVSWT +I+G+AQ+G+ LF + L+ + ++S+L++C L K
Sbjct: 482 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 541
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H+ ++ L + + + N ++++Y + D A ++FE +EF++V+SW SMI+ + L
Sbjct: 542 IHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 600
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+A+ELF MK G+ PD + +L A A L + +H +
Sbjct: 601 ANEALELFHLMK-------------ETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 647
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ GF + +A+ L+ YARCG++ S+ VF+ + DLV W S++ AY +HG + A+
Sbjct: 648 RKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAID 707
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M ++ PD FV++L ACSH+GL+ EG + SM + + P +HY C+VDLL
Sbjct: 708 LFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLL 767
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR + EA + ++ M +EP + +W LLG+C+ H L E+AA KL +++P + +V
Sbjct: 768 GRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYV 827
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SN+Y + +R MK S ++K PG SWIE+ N+VH F + K HPQ I+
Sbjct: 828 LVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYS 887
Query: 481 KLEELIGQL-KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
KL ++ +L K GYV +T LH+ +EE K + LY HSE+LA+ + ++ E +
Sbjct: 888 KLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTT----PEGAS 943
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+R+C DCHNF KL S +E+V+RD+NRFHHFK +CSC D W
Sbjct: 944 LRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/471 (29%), Positives = 234/471 (49%), Gaps = 39/471 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMI--NNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ Y+++ C + + Q+H HMI N N +F++ L+ MY K G L DA
Sbjct: 115 EAYSSVLELCGSKKALSEGQQVHAHMITSNALFN---SVFLSTRLVFMYGKCGCLVDAEK 171
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH- 121
LFD MP + + +W A+I Y +G L+ + P + + +L +C L
Sbjct: 172 LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKD 231
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENM-EFRNVISWNSMI 175
G VH LA+K + V+VAN+++ MY+K C D A ++F+ M E +V+SWNSMI
Sbjct: 232 RRCGAEVHGLAIKEGYVSIVFVANSIVGMYTK-CNDLNGARQLFDRMPEKEDVVSWNSMI 290
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+A+ + Q+IE AL LF ++Q+ +AP+ TF L+AC +
Sbjct: 291 SAYSS---NGQSIE----------ALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 337
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H+ + K + + +ANALI YAR G + + +F M D +SWNS+L + +
Sbjct: 338 MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQN 397
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G EALQ + M +PD +S+++A + +G G ++ H+ +G+ L
Sbjct: 398 GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQI-HAYAMKNGLDSDLQV 456
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE-TRLAELAATKLKQL 411
+VD+ + + + + +MP + D V W+ ++ ++G +R EL + QL
Sbjct: 457 GNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAGHAQNGSHSRALEL--FREVQL 513
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
E G L + +S+I L+ S K KE+ +RK GLS + ++N +
Sbjct: 514 E-GIDLDVMMISSIL-LACSGLKLISSVKEIHSYIIRK--GLSDLVLQNGI 560
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/594 (35%), Positives = 326/594 (54%), Gaps = 31/594 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YAT+ +C L ++ QLH ++ D + L+++YA G + AR LFDE
Sbjct: 66 YATILRSCVLSRAVRPGRQLHARLL--VSGLGLDAVLATRLVDLYASCGLVSVARRLFDE 123
Query: 68 MPKR-NVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISC----DYL 120
MP + NV W LI YA+ G E L+ +L P+ F+ VL +C D
Sbjct: 124 MPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLG 183
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ VH ++ S A V+V LI+MY+K C DEAW VF++ R+ + WNSMIAA
Sbjct: 184 AGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAAC- 242
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ EAL L R + EG+AP T + A A +H
Sbjct: 243 ------------GQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELH 290
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ GF + +L+ YA+ G +++++ +FD++ + +L+SWN+++ + +HG A
Sbjct: 291 GYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHAD 350
Query: 300 EALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
A +LF M V PD TFV +LSAC+H G+VQE +VF M+ + + P + HY C
Sbjct: 351 HACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTC 410
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VD+LG GR EA +I+ M ++PDS IW LL C+ H LAELA KL +LEP D
Sbjct: 411 LVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPED 470
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +V +SNIY SG + +A +RK M ++K SWIE++ + H F G HP+
Sbjct: 471 AGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRS 530
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+++LE L G + GYVP+T+ H++E++ K + HSE+LA+ F +++ +
Sbjct: 531 DEIYEELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTK 590
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + KN+R+C DCH +KL S + +EI++RD NR+HHF + CSC D+W
Sbjct: 591 ----LLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/549 (38%), Positives = 309/549 (56%), Gaps = 28/549 (5%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFS 109
MY F +D A +F+++P W +I G+A G L+ +++ P++F+
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 110 LASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENM 163
L SC D GK++H + ++V AL++MY+K C D A VF+ M
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAK-CGDIEAARLVFDKM 879
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
R+++SW SMI+ + A E L F ++ G+ P+ + VL
Sbjct: 880 AVRDLVSWTSMISGY-------------AHNGYNSETLGFFDLMRSSGVIPNRVSILSVL 926
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
AC L R HS + + GFE D ++A A++ Y++CGS+ L++ +FD+ DLV
Sbjct: 927 LACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLV 986
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
W++++ +Y +HG ++A+ LF M V+P TF +LSACSH+GL++EG F M
Sbjct: 987 CWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLM 1046
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
E + +L +YACMVDLLGR G++ EA LI MP+EPD+ IW LLG+CR H L
Sbjct: 1047 TEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDL 1106
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
AE A L L+P + V +SNIY +N+ +RK M K G S +E +N
Sbjct: 1107 AEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDN 1166
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEK 520
+VH+F G + HPQ E ++ KLEEL +K +GYVP T LHDIEEE KE L +HSE+
Sbjct: 1167 QVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSER 1226
Query: 521 LALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
LA+ F ++N + +RI KN+RIC DCHN +KL S ++ + I+VRD +RFH F+D
Sbjct: 1227 LAIAFGLINTSP----GTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFED 1282
Query: 581 RICSCNDYW 589
+CSC DYW
Sbjct: 1283 GVCSCGDYW 1291
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 281/505 (55%), Gaps = 25/505 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA N+K +H +I DL + N L+N+YAK G A +LF +MP
Sbjct: 211 SVVSACAQLLNVKAGSCVHGLVIRR--EFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP 268
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKL 124
+++V+SW+ +I+ YA + A E LF +++ F PN ++ S L +C + GK
Sbjct: 269 EKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK 328
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H +A+ + V+ ALI+MY K SC DEA +F+ + ++V+SW ++++ +
Sbjct: 329 IHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGY----- 383
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
A+ +++ +FR + +G+ PD +L A + L + A +H +
Sbjct: 384 --------AQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV 435
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ GF + + +LI Y++CGS+ + ++F M D+V W+S++ AY +HG+ EAL+
Sbjct: 436 RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALE 495
Query: 304 LFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F M V+P++ TF+S+LSACSHAGLV+EG K+F M+ ++ + P +H+ MVDL
Sbjct: 496 IFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDL 555
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR+G++ +A +I MP+ +W LLG+CR H + E AA L L+P + +
Sbjct: 556 LGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYY 615
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
+ +SNIY + G ++ +R +K ++K G S +E+ VH F + + HP + I+
Sbjct: 616 ILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIY 675
Query: 480 KKLEELIGQLKGMGYVPETSLALHD 504
+ L +L Q+ Y+P+ LHD
Sbjct: 676 ELLRKLEAQMGKEVYIPDLDFLLHD 700
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 197/410 (48%), Gaps = 38/410 (9%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
+ S Q+ LF AC N + QLH + D F L ++YAK L A
Sbjct: 1 MRSRQVLVDLFQAC---NNGRSVSQLHSQVFKT--GILHDTFFATKLNSLYAKCASLQAA 55
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF----CSLLQYFFPNEFSLASVLISC 117
R +FDE P NV W + + Y + EE RLF C+ + P+ F++ L +C
Sbjct: 56 RKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEA--PDNFTIPIALKAC 113
Query: 118 DYLH----GKLVHALALKFS-LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVIS 170
L GK++H A K + + ++V +AL+ +YSK C EA KVFE + + +
Sbjct: 114 AGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSK-CGQMGEALKVFEEFQRPDTVL 172
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL-QREGMAPDWCTFSIVLKACAGL 229
W SM+ ++ + + EEAL LF Q+ + + D T V+ ACA L
Sbjct: 173 WTSMVTGYQ-------------QNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQL 219
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+ + S VH L+ + F+ D + N+L++ YA+ G ++ +F KM D++SW++++
Sbjct: 220 LNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMI 279
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA + A EAL LF M +P+S T VS L AC+ + ++EG K+ H + G
Sbjct: 280 ACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKI-HKIAVWKGF 338
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + EA L + +P + D V W LL ++G
Sbjct: 339 ELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVALLSGYAQNG 387
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 155/323 (47%), Gaps = 63/323 (19%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
+CA ++++ +H+H++ DLFV L++MYAK G ++ AR +FD+M R++
Sbjct: 827 SCAGLSDLQRGKVIHQHLV--CCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL----HGKLVHA 127
VSWT++ISGYA +G E F L++ PN S+ SVL++C L G+ H+
Sbjct: 885 VSWTSMISGYAHNGYNSETLGFF-DLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHS 943
Query: 128 LALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
++ + + VA A+++MYSK + D A +F+ ++++ W++MIA++ +
Sbjct: 944 YVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRK 1003
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
AI+ LF Q+ + G+ P TF+ VL AC+ HS
Sbjct: 1004 AID-------------LFDQMVKAGVRPSHVTFTCVLSACS-----------HS------ 1033
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMT-----YHDLVSWNSILKAYALHGQAKEA 301
G + K F MT L ++ ++ GQ EA
Sbjct: 1034 ------------------GLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEA 1075
Query: 302 LQLFSNMNVQPDSATFVSLLSAC 324
+ L NM V+PD++ + SLL AC
Sbjct: 1076 VDLIENMPVEPDASIWGSLLGAC 1098
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H+ I YG + D+ I Y I + VF+ + WN +++ +A G+
Sbjct: 739 THAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGR 798
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+L+L+S M ++PD F L +C+ +Q G KV H L G L A
Sbjct: 799 FLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRG-KVIHQHLVCCGCSNDLFVDA 857
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+VD+ + G I EA +L+ + D V W+ ++ +G
Sbjct: 858 ALVDMYAKCGDI-EAARLVFDKMAVRDLVSWTSMISGYAHNG 898
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 325/556 (58%), Gaps = 56/556 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV + L++MYAKFG + DAR + D++ ++VV +TALI GY+ HG E ++F ++
Sbjct: 212 NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMT 271
Query: 101 QYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
+ NE++L+SVL+ C D G+L+H L +K L++
Sbjct: 272 KKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLES------------------- 312
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
++W S+I + EE AL FRQ+ R + P+
Sbjct: 313 ------------AVTWTSVIVGL-------------VQNGREEIALLKFRQMLRSSITPN 347
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T S VL+AC+ L +H+++ K+G + D + ALI Y +CGS +++ VF+
Sbjct: 348 SFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFN 407
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+ D+VS NS++ +YA +G EALQLFS M ++P++ T++ +LSAC++AGL++E
Sbjct: 408 GLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEE 467
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G +F S + + DHYACMVDLLGR GR+ EAE LI ++ + D VIW LL +C
Sbjct: 468 GCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWRTLLSAC 526
Query: 393 RKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPG 452
R HG+ +A+ ++ L P D V +SN+Y +G+++K ++ M+ R++K P
Sbjct: 527 RIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPA 586
Query: 453 LSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE 512
+SW+++E +H F +G HP I +KLEELI ++K +GYVP+T L D++EE K
Sbjct: 587 MSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIR 646
Query: 513 QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
LY+HSEKLA+ FA+ + + IRI+KN+R+C DCH +MK S ++G++I+ RD
Sbjct: 647 SLYYHSEKLAVAFALWRSN---YKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDV 703
Query: 573 NRFHHFKDRICSCNDY 588
RFHHF++ +CSC DY
Sbjct: 704 KRFHHFRNGLCSCGDY 719
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 194/442 (43%), Gaps = 98/442 (22%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F S Q+Y++L C +I ++ H + + + N LI+ Y K G +
Sbjct: 74 FSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS----LGNKLIDAYLKCGSVVY 129
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDY 119
AR +FDE+P R++V+W ++I+ Y ++G ++E ++ ++ P+EF+ +SV +
Sbjct: 130 ARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSD 189
Query: 120 L----HGKLVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
L G+ H ++ + ++V+V +AL++MY+K +A V + + ++V+ + +
Sbjct: 190 LGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTA 249
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I ++ + E+L +FR + ++G+ + T S VL C L
Sbjct: 250 LIVG-------------YSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 296
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H LI K G E V+W S++
Sbjct: 297 SGRLIHGLIVKAGLE--------------------------------SAVTWTSVIVGLV 324
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G+ + AL F M ++ P+S T S+L ACS ++++G ++ H+++ G+ +
Sbjct: 325 QNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQI-HAIVMKFGL--DI 381
Query: 351 DHY--ACMVDLLGRVGR----------ILEAEKL------------------------IR 374
D Y A ++D G+ G +LE + + ++
Sbjct: 382 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 441
Query: 375 EMPMEPDSVIWSVLLGSCRKHG 396
+ +EP++V W +L +C G
Sbjct: 442 DTGLEPNNVTWLGVLSACNNAG 463
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+S +++ C G+ + + + S K GF + N LI AY +CGS+ +++VFD++
Sbjct: 81 YSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVP 138
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
+ +V+WNS++ +Y +G++KEA+ ++ M + PD TF S+ A S GLV EG +
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 198
Query: 336 VFHSMLENHGV-VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
H GV V + + +VD+ + G++ +A +L+ + + D V+++ L+
Sbjct: 199 A-HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA-RLVSDQVVGKDVVLFTALIVGYSH 256
Query: 395 HGE 397
HGE
Sbjct: 257 HGE 259
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/594 (37%), Positives = 338/594 (56%), Gaps = 27/594 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S +A++ CA ++ QLH ++ Q+ + L+ Y+K + DA
Sbjct: 298 SESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN--IRTALMVAYSKCMAMLDALR 355
Query: 64 LFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH 121
LF E NVVSWTA+ISG+ Q+ EE LF + + PNEF+ + +L + +
Sbjct: 356 LFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVIS 415
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
VHA +K + + V AL++ Y K DEA KVF ++ +++++W++M+A +
Sbjct: 416 PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGY-- 473
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER-HASAVH 239
AQA E E A+ +F +L + G+ P+ TFS +L CA H
Sbjct: 474 ----AQAGE-------TEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFH 522
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
K + +++AL+ YA+ G I +++VF + DLVSWNS++ YA HGQA
Sbjct: 523 GFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 582
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL +F M V+ DS TF+ + +AC+HAGLV+EG K F M+ + + P +H +CM
Sbjct: 583 KALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 642
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDL R G++ +A K+I MP S IW +L +CR H +T L LAA K+ + P DS
Sbjct: 643 VDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDS 702
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SN+Y SG + + +RK M V+K PG SWIE++N+ + F +G + HP ++
Sbjct: 703 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKD 762
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ KLE+L +LK +GY P+TS L DI++EHKE L HSE+LA+ F ++ +
Sbjct: 763 QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLI----ATPK 818
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF-KDRICSCNDYW 589
S + I+KN+R+C DCH +KL + + +EIVVRDSNRFHHF D +CSC D+W
Sbjct: 819 GSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 193/372 (51%), Gaps = 31/372 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V L++ Y K D R++FDEM +RNVV+WT LISGYA++ EE LF +
Sbjct: 131 DVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQ 190
Query: 101 -QYFFPNEFSLASVL--ISCDYLHGK--LVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ PN F+ A+ L ++ + + G+ VH + +K LD + V+N+LIN+Y K C +
Sbjct: 191 DEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK-CGNV 249
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A +F+ E ++V++WNSMI+ + A L+ +A+ +F M+ L
Sbjct: 250 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRL------------ 297
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+F+ ++K CA L R +H + KYGF D I AL+ AY++C ++ + ++
Sbjct: 298 -SESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRL 356
Query: 274 FDKMTY-HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
F + + ++VSW +++ + + +EA+ LFS M V+P+ T+ +L+A
Sbjct: 357 FKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISP 416
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ +V + E V ++D ++G++ EA K+ + D V WS +L
Sbjct: 417 SEVHAQVVKTNYERSSTVG-----TALLDAYVKLGKVDEAAKVFSGID-NKDIVAWSAML 470
Query: 390 GSCRKHGETRLA 401
+ GET A
Sbjct: 471 AGYAQAGETEAA 482
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 197/390 (50%), Gaps = 25/390 (6%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS---- 116
A +LFD+ P R+ S+T+L+ G+++ G +E RLF ++ + S+ S ++
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 117 -CDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
CD L G+ +H +KF V V +L++ Y K S + VF+ M+ RNV++W ++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ + A+ EE L LF ++Q EG P+ TF+ L A
Sbjct: 170 ISGY-------------ARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGR 216
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH+++ K G + ++N+LI+ Y +CG++ ++ +FDK +V+WNS++ YA
Sbjct: 217 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 276
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+G EAL +F +M +V+ ++F S++ C++ ++ ++ S+++ V Q
Sbjct: 277 NGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNI 336
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-GSCRKHG-ETRLAELAATKLK 409
A MV + +L+A +L +E + V W+ ++ G + G E + + K K
Sbjct: 337 RTALMV-AYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRK 395
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
+ P + V ++ + +S S A++++
Sbjct: 396 GVRPNEFTYSVILTALPVISPSEVHAQVVK 425
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 342/659 (51%), Gaps = 79/659 (11%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F + T F +C + A LH + +D FV + L++ Y + G +
Sbjct: 16 FPPDPHLLPTAFKSCP---TLPLARALHA--VAEVSGLARDPFVASSLLHAYLRLGTTGN 70
Query: 61 ARHLFDEMPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVL-- 114
AR LFD MP+ R VV W+AL++ +A G+AE +RL + + PN + ++
Sbjct: 71 ARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSG 130
Query: 115 -----------------------------ISCDYLH---------GKLVHALALKFSLDA 136
+SC G+ +H A+K A
Sbjct: 131 LNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRA 190
Query: 137 HVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
V ALI+MY K A E +VF+ +V S N++IA +A+ LF +
Sbjct: 191 DACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFV 250
Query: 196 N----------------------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+ + EA+ FR++Q +G P+ T VL A A +
Sbjct: 251 DRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALM 310
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
H + H + GF D +++AL+ YA+CG + ++ +FD M ++VSWN+++ YA
Sbjct: 311 HGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYA 370
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
++G+A A+ +F +M +PD TF LL+AC+ AGL +EG F M +GV P++
Sbjct: 371 MYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRM 430
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HYACMV LLGR G++ EA LI +MP EPD+ IW LLGSCR HG LAE+AA KL
Sbjct: 431 EHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFH 490
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
LEP ++ +V +SNIY +++ +R+ MK ++K G SWIEI+N+VH +G
Sbjct: 491 LEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDD 550
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP AI +K+ +L Q++ +G+VP T LHD+EE+ K++ L HSEKLA+ +++
Sbjct: 551 SHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLIST 610
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R++KN+RIC DCH MK S G+EI VRD+NRFHHF CSC D+W
Sbjct: 611 SP----GTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
L+ PD K+C L R A+H++ G D +A++L+HAY R G+
Sbjct: 11 LRHVSFPPDPHLLPTAFKSCPTLPLAR---ALHAVAEVSGLARDPFVASSLLHAYLRLGT 67
Query: 267 ISLSKQVFDKM--TYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSL 320
++ +FD M +V W++++ A+A G A+ A +L M V+P+ T+ L
Sbjct: 68 TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+S + +G ++ +M + P +C + +G VG + ++L
Sbjct: 128 VSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL 179
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/542 (39%), Positives = 321/542 (59%), Gaps = 31/542 (5%)
Query: 61 ARHLFDEMPKR-NVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PN----EFSLASV 113
A +F ++ K NV W LI GYA+ GN+ L+ + F P+ F L +V
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131
Query: 114 LISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISW 171
D G+ +H++ ++ + +YV N+L+++Y+ +C D A+KVF+ M +++++W
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEKDLVAW 190
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
NS+I F A+ EEAL L+ ++ +G+ PD T +L ACA +
Sbjct: 191 NSVINGF-------------AENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGA 237
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
H + K G + +N L+ YARCG + +K +FD+M + VSW S++
Sbjct: 238 LTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 297
Query: 292 YALHGQAKEALQLFSNMNVQ----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
A++G KEA++LF NM + P TFV +L ACSH G+V+EG + F M E + +
Sbjct: 298 LAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIE 357
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
P+++H+ CMVDLL R G++ +A + I +MPM+P+ VIW LLG+C HG++ LAELA K
Sbjct: 358 PRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMK 417
Query: 408 LKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFAS 467
+ QLEP S +V +SN+Y ++ + IRK+M VRK PG S +E+ NRVHEF
Sbjct: 418 ILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLM 477
Query: 468 GGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAI 527
G K HPQ + I+ KL+E+ +L+ GYVP+ S D+EEE KE L +HSEK+A+ F +
Sbjct: 478 GDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFML 537
Query: 528 MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCND 587
++ ER IR++KN+++C DCH +KL S + +EIVVRD +RFHHFK+ CSC D
Sbjct: 538 ISTP----ERWPIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQD 593
Query: 588 YW 589
YW
Sbjct: 594 YW 595
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 162/328 (49%), Gaps = 25/328 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T Y L A +++ +H +I + ++V N L+++YA G + A +
Sbjct: 121 THTYPFLLKAVGKMADVRLGETIHSVVIRS--GFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH-- 121
FD+MP++++V+W ++I+G+A++G EE L+ + L+ P+ F++ S+L +C +
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGAL 238
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK H +K L +++ +N L+++Y++ +EA +F+ M +N +SW S+I
Sbjct: 239 TLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
L +AIELF M++ +EG+ P TF +L AC+ G+V E
Sbjct: 299 AVNGLGKEAIELFKNMES------------KEGLLPCEITFVGILYACSHCGMVKEGF-E 345
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALH 295
+ +Y E ++ AR G + + + KM ++V W ++L A +H
Sbjct: 346 YFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVH 405
Query: 296 GQAKEA-LQLFSNMNVQPDSATFVSLLS 322
G + A L + ++P+ + LLS
Sbjct: 406 GDSDLAELARMKILQLEPNHSGDYVLLS 433
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 313/545 (57%), Gaps = 34/545 (6%)
Query: 74 VSWTALISGYAQHGN-AEECFRLFCSLLQYFFPNEFSLASVLISC-----DYLHGKLVHA 127
V+W ALISG+ + G E C P + SVL +C D L G VH
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 128 LALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ + + V NAL++MY++ CAD AWKVF+ M+ R+V+SW S+++
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAE-CADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVD 206
Query: 186 QAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACA 227
+A +LF +M + EAL +FR++Q ++ D T V+ ACA
Sbjct: 207 EARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACA 266
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
L V +++ G + D + NALI Y++CGSI + VF M + D +W +
Sbjct: 267 QLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTA 326
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
I+ A++G +EA+++F M + PD TF+ +L+AC+HAGLV +G + F SM+E +
Sbjct: 327 IILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAY 386
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
+ P + HY C++DLLGR G+I EA I +MPM P+S IW LL +CR HG + + EL
Sbjct: 387 NIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELV 446
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
A +L +L+P +S+ ++ +SNIY + R +R + ++K PG S IE++ +HE
Sbjct: 447 AERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHE 506
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F +G + HP + I+ KLE +I L +GY P+ + ++ E+ K++ LY HSEKLA+
Sbjct: 507 FVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIA 566
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
FA+++ + +VIRI+KN+R+C+DCHN +KL S L G+E+VVRD RFHHF+ CS
Sbjct: 567 FALLSS----KPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCS 622
Query: 585 CNDYW 589
C DYW
Sbjct: 623 CKDYW 627
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 15/258 (5%)
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACA----GLVTERHASAVHSLIAKYGFEDDTVI 253
E+A+ + ++ G PD TF +LKA A G + A AVH+ + + G + +
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
A++L+ AY G + ++ + + V+WN+++ + G+ E+ F +M
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 311 QPDSATFVSLLSACSHAGL-VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
P T+VS+LSAC V G +V H + GV+P L +VD+ + A
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQV-HGRVVGSGVLPDLRVENALVDMYAECADMGSA 177
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
K+ M + V W+ LL + G+ + A ++ D++ + M + Y +
Sbjct: 178 WKVFDGMQVR-SVVSWTSLLSGLARLGQV---DEARDLFDRMPERDTVSWTAMIDGYVWA 233
Query: 430 GSFNKARLIRKEMKGSRV 447
F +A + +EM+ S V
Sbjct: 234 ARFREALEMFREMQYSNV 251
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/575 (38%), Positives = 329/575 (57%), Gaps = 30/575 (5%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
Q+H I F P D FV+ ++MY K G L ARHLF EMP RNVV+W A+++
Sbjct: 32 QIHSLAIR-FGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 90
Query: 86 HGNAEECFRLFCSLLQYF-FPNEFSLASVLISCD---YLH-GKLVHALALKFSLDAHVYV 140
G E + L + PN S + +C YL G+ H +K + V V
Sbjct: 91 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 150
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
N++++ Y K CA +A VF+ M RN +SW SM+AA+ A+ EEE
Sbjct: 151 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAY-------------AQNGAEEE 197
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A + +R G P S L CAGL+ A+H++ + + + +A+AL+
Sbjct: 198 AFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVD 257
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSA 315
Y +CG + ++Q+F + +LV+WN+++ YA G A+ AL +F +M P+
Sbjct: 258 MYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYI 317
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T V+++++CS GL ++G ++F +M E G+ P+ +HYAC+VDLLGR G +A ++I+
Sbjct: 318 TLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQG 377
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MPM P +W LLG+C+ HG+T L +AA KL +L+P DS V +SN++ +G + +A
Sbjct: 378 MPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEA 437
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
IRKEMK ++K PG SW+ +N VH F + +H I L +L Q++ GY+
Sbjct: 438 TDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYM 497
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHN 554
P+T +L+D+EEE KE +++ HSEKLAL F G +C V IRIMKN+RICVDCH
Sbjct: 498 PDTQYSLYDLEEEEKESEVFQHSEKLALAF-----GLICIPPGVPIRIMKNLRICVDCHR 552
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S ++G+EI+VRD+NRFHHFK CSC DYW
Sbjct: 553 AFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/575 (38%), Positives = 329/575 (57%), Gaps = 30/575 (5%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
Q+H I F P D FV+ ++MY K G L ARHLF EMP RNVV+W A+++
Sbjct: 139 QIHSLAIR-FGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197
Query: 86 HGNAEECFRLFCSLLQYF-FPNEFSLASVLISCD---YLH-GKLVHALALKFSLDAHVYV 140
G E + L + PN S + +C YL G+ H +K + V V
Sbjct: 198 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 257
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
N++++ Y K CA +A VF+ M RN +SW SM+AA+ A+ EEE
Sbjct: 258 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAY-------------AQNGAEEE 304
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A + +R G P S L CAGL+ A+H++ + + + +A+AL+
Sbjct: 305 AFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVD 364
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSA 315
Y +CG + ++Q+F + +LV+WN+++ YA G A+ AL +F +M P+
Sbjct: 365 MYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYI 424
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T V+++++CS GL ++G ++F +M E G+ P+ +HYAC+VDLLGR G +A ++I+
Sbjct: 425 TLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQG 484
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MPM P +W LLG+C+ HG+T L +AA KL +L+P DS V +SN++ +G + +A
Sbjct: 485 MPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEA 544
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
IRKEMK ++K PG SW+ +N VH F + +H I L +L Q++ GY+
Sbjct: 545 TDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYM 604
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHN 554
P+T +L+D+EEE KE +++ HSEKLAL F G +C V IRIMKN+RICVDCH
Sbjct: 605 PDTQYSLYDLEEEEKESEVFQHSEKLALAF-----GLICIPPGVPIRIMKNLRICVDCHR 659
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S ++G+EI+VRD+NRFHHFK CSC DYW
Sbjct: 660 AFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 171/373 (45%), Gaps = 28/373 (7%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
F+ HL+N+Y+K A P VVS+TA ISG AQHG F +L+
Sbjct: 52 FICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRL 111
Query: 103 FF-PNEFSLASVLISCDYLH-----GKLVHALALKFS-LDAHVYVANALINMYSKSCADE 155
PN+F+ S + G +H+LA++F L +V+ A ++MY K+ +
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171
Query: 156 -AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A +F M RNV++WN+++ L+ + +E EA F R+ G P
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMT---NAVLDGRPLETI-------EAYFGLRE---AGGLP 218
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ + ACAG + H + K GFE D + N+++ Y +C ++ VF
Sbjct: 219 NVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVF 278
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQ 331
D M + VSW S++ AYA +G +EA + +P S L+ C AGL+
Sbjct: 279 DGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTC--AGLLG 336
Query: 332 -EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ H++ + + + +VD+ G+ G + +AE++ E P + V W+ ++G
Sbjct: 337 LHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQR-NLVTWNAMIG 395
Query: 391 SCRKHGETRLAEL 403
G+ + A L
Sbjct: 396 GYAHIGDAQNALL 408
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/594 (36%), Positives = 345/594 (58%), Gaps = 29/594 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
++ Y L AC +I+ ++ +MIN+ + D ++ N ++ M+ K G + DAR L
Sbjct: 131 SETYDALVSACIGLKSIRGVKKVFNYMINSGLDP--DEYLRNRVLLMHVKCGMMIDARRL 188
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCD-----Y 119
FDEMP++N++SW +I G G+ E FRLF + Q F + +I
Sbjct: 189 FDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLI 248
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H+ +LK + V+VA ALI+MYSK ++A VF+ M + + WNS+IA +
Sbjct: 249 FAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGY 308
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A EEAL ++ +++ G+ D TFSI+++ CA L + HA
Sbjct: 309 -------------ALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQA 355
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + ++GF D V AL+ Y++ G I +K VFD M + +++SWN+++ Y HG+
Sbjct: 356 HAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRG 415
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
EA+++F M + P+ TF+++LSACS++GL G ++F SM +H + P+ HYAC
Sbjct: 416 VEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYAC 475
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
M++LLGR G + EA LI++ P +P +W+ LL +CR H L + AA KL + P
Sbjct: 476 MIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEK 535
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+V + NIY SG +A + + +K +R P SWIEI+ + + F SG K H Q
Sbjct: 536 LSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQS 595
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I++KL+EL+ ++ GYVP+ L D++E+ +E L +HSEKLA+ F ++N
Sbjct: 596 KEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQ-EERVLLYHSEKLAIAFGLINTS---- 650
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + ++I+++ RIC DCH+ +KL + + +EIVVRD++RFHHFKD CSC DYW
Sbjct: 651 DWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 300 EALQLFS----NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
EAL+LF N DS T+ +L+SAC ++ KVF+ M+ N G+ P D Y
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMI-NSGLDP--DEYLR 169
Query: 356 MVDLLGRV--GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
LL V G +++A +L EMP E + + W+ ++G G+
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMP-EKNILSWNTIIGGLVDAGD 212
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/575 (37%), Positives = 328/575 (57%), Gaps = 36/575 (6%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
+ N L++MY K G +D A+ LFDE RN+V + ++S YA+ G A E + +LQ
Sbjct: 269 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQG 328
Query: 104 -FPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AW 157
P+ ++ S + + D +GK+ H ++ L+ + N +I+MY K E A
Sbjct: 329 PRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMAC 388
Query: 158 KVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNE------------------E 198
+VF+ M + V+SWNS+ A F R +E+ A E+F ++ E
Sbjct: 389 RVFDLMSNKTVVSWNSLTAGFIRNGDVES-AWEVFNQIPERNAVFWNTMISGLVQKSLFE 447
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+A+ LFR++Q EG+ D T + AC L A VH+ I K G D + AL+
Sbjct: 448 DAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALV 507
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
+ARCG + QVF+KMT D+ +W + + A+ G + A LF+ M V+PD
Sbjct: 508 DMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVV 567
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
FV +L+ACSH G V++G +F S++E+HG+ PQ++HY CMVDLLGR G + EA LI+
Sbjct: 568 LFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKS 626
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MPMEP+ V+W LL +CR H +A AA ++ +L P + V +SNIY +G +
Sbjct: 627 MPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDV 686
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
+R ++ VRK PG S +++ +HEF SG + HP+ I L+E+ + G++
Sbjct: 687 ARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHI 746
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHN 554
P+ S L D++E+ KE L HSEKLA+ F ++ G RS+ IR++KN+R+C DCH+
Sbjct: 747 PDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATG-----RSMPIRVVKNLRMCSDCHS 801
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
F K+AS + +EI+VRD+NRFH F+ +CSC DYW
Sbjct: 802 FAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 155/327 (47%), Gaps = 38/327 (11%)
Query: 20 NIKQAMQLHEHMINNFPNE-PQDLFVTNHLINMYAKFGY---LDDARHLFDEMPKRNVVS 75
+ Q QLH + N ++ P L L+N A+ LD AR F E+ K +V S
Sbjct: 37 TLNQLKQLHCQITKNGLDQIPSTL---TKLVNAGAEIASPESLDYARKAF-ELFKEDVRS 92
Query: 76 ------WTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCD----YLHGKL 124
+LI GY+ G E L+ +L PN ++ VL C + G
Sbjct: 93 DDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQ 152
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACK 182
VH +K L+ V++ N LI+ Y++ C D KVFE M RNV+SW S+I +
Sbjct: 153 VHGSVVKMGLEEDVFIQNCLIHFYAE-CGHMDHGHKVFEGMSERNVVSWTSLICGY---- 207
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A+ +EA+ LF ++ G+ P T V+ ACA L V + I
Sbjct: 208 ---------ARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYI 258
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ G + + V+ NAL+ Y +CG+I +K++FD+ +LV +N+IL YA G A+EAL
Sbjct: 259 GELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREAL 318
Query: 303 QLFSNM---NVQPDSATFVSLLSACSH 326
+ M +PD T +S +SA +
Sbjct: 319 AILDEMLQQGPRPDRVTMLSAISASAQ 345
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 27/303 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALIN----MYSKSCADEAWKVFE--NMEFRN---VISWNS 173
K +H K LD L+N + S D A K FE + R+ + NS
Sbjct: 42 KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNS 101
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I + + L +AI L+ +M L L G+ P+ TF VL C +
Sbjct: 102 LIRGYSSAGLGREAILLYVRM------LVL-------GVTPNHYTFPFVLSGCTKIAAFC 148
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH + K G E+D I N LIH YA CG + +VF+ M+ ++VSW S++ YA
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYA 208
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+ KEA+ LF M ++P S T V ++SAC+ + G +V + E G+
Sbjct: 209 RGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE-LGLKLNK 267
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+VD+ + G I A++L E ++ + V+++ +L + + G R A ++ Q
Sbjct: 268 VMVNALVDMYMKCGAIDAAKRLFDEC-VDRNLVLYNTILSNYARQGLAREALAILDEMLQ 326
Query: 411 LEP 413
P
Sbjct: 327 QGP 329
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
AC G + A +H ++ N P D+ + L++M+A+ G A +F++M +R+V
Sbjct: 474 ACGYLGAPELAKWVHTYIEKN--GIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDV 531
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHALALKF 132
+WTA I A GN E LF +L Q P+ VL +C HG V F
Sbjct: 532 SAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACS--HGGQVEQGLHIF 589
Query: 133 SL------DAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFRACK 182
SL + ++++ ++ EA+ + ++M N + W S++AA R K
Sbjct: 590 SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHK 647
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/586 (36%), Positives = 330/586 (56%), Gaps = 31/586 (5%)
Query: 14 ACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRN 72
ACA G++ LH + F E + N L++MY+K G L+DA F++M ++
Sbjct: 663 ACANVGSLSLGRALHGQGVKACFSRE---VMFNNTLLDMYSKCGNLNDAIQAFEKMGQKT 719
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKLVHA 127
VVSWT+LI+ Y + G ++ RLF + + P+ +S+ SVL +C G+ VH
Sbjct: 720 VVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHN 779
Query: 128 LALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
K ++ + V+NAL++MY+K + +EA+ VF + ++++SWN+MI + L +
Sbjct: 780 YIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNE 839
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
A++LFA+M+ E PD T + +L AC L +H I + G
Sbjct: 840 ALKLFAEMQKESR--------------PDGITMACLLPACGSLAALEIGRGIHGCILRNG 885
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
+ + +ANALI Y +CGS+ ++ +FD + DL++W ++ +HG EA+ F
Sbjct: 886 YSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQ 945
Query: 307 NM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M ++PD TF S+L ACSH+GL+ EG F+SM+ + P+L+HYACMVDLL R
Sbjct: 946 KMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLART 1005
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
G + +A LI MP++PD+ IW LL CR H + LAE A + +LEP ++ +V ++
Sbjct: 1006 GNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLA 1065
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
NIY + + + + +R+ + ++K PG SWIE++ + F S HPQ ++IF L
Sbjct: 1066 NIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLN 1125
Query: 484 ELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIM 543
L ++K G+ P+ AL + + KE L HSEKLA+ F I+N S IR+
Sbjct: 1126 NLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPS----GRTIRVA 1181
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+R+C DCH K S +EI++RDSNRFHHFKD CSC D+W
Sbjct: 1182 KNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 186/398 (46%), Gaps = 27/398 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+++ CA H +++ +H + +N P + + L+ MY G L + R +FD
Sbjct: 454 YSSILQLCAEHKCLQEGKMVHSVISSN--GIPIEGVLGAKLVFMYVSCGALREGRRIFDH 511
Query: 68 MPKRN-VVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL-- 124
+ N V W ++S YA+ G+ E LF + + S ++ C G++
Sbjct: 512 ILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGE 571
Query: 125 ---VHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRA 180
+H K ++ V N+LI Y KS D A K+F+ + R+V+SWNSMI+
Sbjct: 572 CKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVM 631
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+E F +M + R + D T + ACA + + A+H
Sbjct: 632 NGFSHSALEFFVQM-------LILR------VGVDLATLVNSVAACANVGSLSLGRALHG 678
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K F + + N L+ Y++CG+++ + Q F+KM +VSW S++ AY G +
Sbjct: 679 QGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDD 738
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A++LF M V PD + S+L AC+ + +G V H+ + + + L ++
Sbjct: 739 AIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDV-HNYIRKNNMALCLPVSNALM 797
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
D+ + G + EA + ++P++ D V W+ ++G K+
Sbjct: 798 DMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGGYSKN 834
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRN-VISWNSMIAAF 178
GK+VH++ + + L+ MY SC E ++F+++ N V WN M++ +
Sbjct: 470 GKMVHSVISSNGIPIEGVLGAKLVFMYV-SCGALREGRRIFDHILSDNKVFLWNLMMSEY 528
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
AK+ + E+++LF+++Q+ G+ + TFS +LK A L +
Sbjct: 529 -------------AKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI 575
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + K GF + N+LI Y + G + + ++FD++ D+VSWNS++ ++G +
Sbjct: 576 HGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFS 635
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
AL+ F M V D AT V+ ++AC++ G + G + H ++
Sbjct: 636 HSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLG-RALHGQGVKACFSREVMFNNT 694
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + G + +A + +M + V W+ L+ + + G
Sbjct: 695 LLDMYSKCGNLNDAIQAFEKMG-QKTVVSWTSLIAAYVREG 734
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
E I F ++ + A+ L R Q+ + D +S +L+ CA + VHS+I+
Sbjct: 421 ENTKICKFCEVGDLRNAVELLRMSQKSEL--DLNAYSSILQLCAEHKCLQEGKMVHSVIS 478
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDK-MTYHDLVSWNSILKAYALHGQAKEAL 302
G + V+ L+ Y CG++ +++FD ++ + + WN ++ YA G +E++
Sbjct: 479 SNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESI 538
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL--DHYACMV 357
LF M + +S TF +L + G V E ++ HG V +L Y +V
Sbjct: 539 YLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI-------HGCVYKLGFGSYNTVV 591
Query: 358 DLL----GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ L + G + A KL E+ + D V W+ ++ C +G
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELG-DRDVVSWNSMISGCVMNG 633
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/561 (36%), Positives = 332/561 (59%), Gaps = 32/561 (5%)
Query: 35 FPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F P+ DLF N ++ Y + L AR LF+ MP+R++VSW A++SGYAQ+G +E
Sbjct: 18 FDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAR 77
Query: 94 RLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVHALAL-KFSLDAHVYVANALINMYSKS 151
+F Y P + ++ + L++ +G++ A L + +D + N L+ + +
Sbjct: 78 EIF-----YKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRK 132
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+ +F+NM R+ ISW++MIA + ++ EEAL F ++QR+
Sbjct: 133 RRN----LFDNMPQRDSISWSAMIAGY-------------SQNGCSEEALHFFVEMQRDC 175
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ +F+ L C+ + +H + K G++ + NAL+ Y +CGSI ++
Sbjct: 176 ERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEAR 235
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
F ++ D+VSWN+++ YA HG +EAL +F M ++PD AT VS+L+ACSHAG
Sbjct: 236 DAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAG 295
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV +G++ F+SM ++G+ +L HY CMVDLLGR G++ EA+ L++ MP EPD+ W L
Sbjct: 296 LVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGAL 355
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
LG+ R HG T L E AA + ++EP +S ++ +S +Y SG ++ A +R EM+ V+
Sbjct: 356 LGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVK 415
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PG SW+E++N++H F G HP + I+ LEE+ +LK GY+ T+L HD+EEE
Sbjct: 416 KVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEE 475
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K L +HSEKLA+ + I+ IR++KN+R+C DCHN +K S ++G+ I+
Sbjct: 476 EKVHMLKYHSEKLAVAYGIL----YIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLII 531
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
+RD++RFH+F+ CSC D+W
Sbjct: 532 LRDNHRFHYFEGGSCSCRDFW 552
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSAT 316
+I Y R L++ +FDKM DL SWN +L Y + K A LF M + D +
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERM-PERDIVS 59
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
+ ++LS + G V E ++F+ M +G+ + ++ + GRI +A++L E
Sbjct: 60 WNAMLSGYAQNGFVDEAREIFYKMPLKNGI-----SWNGLLAAYVQNGRIEDAKRLF-ES 113
Query: 377 PMEPDSVIWSVLLGS 391
M+ V W+ L+G
Sbjct: 114 KMDWTLVSWNCLMGG 128
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/624 (34%), Positives = 339/624 (54%), Gaps = 48/624 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
++ +F AC+ N + ++++M++ F V +++M+ K G +D AR F
Sbjct: 113 VFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNS---CVKGSILDMFIKCGRMDIARRFF 169
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL---- 120
+E+ ++V W ++SGY G ++ +F + L+ PN ++AS + +C L
Sbjct: 170 EEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLR 229
Query: 121 HGKLVHALALKFS-LDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIA-- 176
HG+ +H +K LD+ + V N+L++ Y+K + E A + F ++ +++SWN+M+A
Sbjct: 230 HGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVT 289
Query: 177 AFRACKLEAQAIELFAKM----------------------------KNEEEALFLFRQLQ 208
F A+E F +M AL L R++
Sbjct: 290 GFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 349
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ + T L AC+ L R +H I + G + I N+LI Y RCGSI
Sbjct: 350 LSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQ 409
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACS 325
S+++FD M DLVSWN ++ Y +HG +A+ LF M ++P+ TF +LLSACS
Sbjct: 410 KSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS 469
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H+GL++EG K F M + + P ++ YACMVDLL R G+ E + I +MP EP++ +W
Sbjct: 470 HSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVW 529
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG+CR H LAE AA L +LEP S +V M+NIY +G + A IR MK
Sbjct: 530 GSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKER 589
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V K PG SWIE++ ++H F G HP E I K+E L +K +GYVP+T+ L D+
Sbjct: 590 GVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDV 649
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+E+ KE L HSEK+AL F +++ + + +RI+KN+R+C DCH+ K S + +
Sbjct: 650 DEDEKEFSLCGHSEKIALAFGLISTTA----GTPLRIIKNLRVCGDCHSATKFISKVEKR 705
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
+I++RD+ RFHHF D +CSC DYW
Sbjct: 706 DIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 211/446 (47%), Gaps = 74/446 (16%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+IYA++ C N++ Q+H ++ N + + F+ + L+ +Y + G ++DAR +F
Sbjct: 11 EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE--FLGSRLLEVYCQTGCVEDARRMF 68
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYL 120
D+M +RNV SWTA++ Y G+ EE +LF ++ + P+ F V +C +Y
Sbjct: 69 DKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYR 128
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAF 178
GK V+ L + + V ++++M+ K C D A + FE +EF++V WN M++ +
Sbjct: 129 VGKDVYDYMLSIGFEGNSCVKGSILDMFIK-CGRMDIARRFFEEIEFKDVFMWNIMVSGY 187
Query: 179 RACKLEAQAIELFAKMKNE-EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ K E ++AL +FR++ EG+ P+ T + + AC L RH
Sbjct: 188 TS--------------KGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 233
Query: 238 VHSLIAKY-GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL--KAYAL 294
+H K + D ++ N+L+ YA+C S+ ++++ F + DLVSWN++L +
Sbjct: 234 IHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQ 293
Query: 295 HGQAKEALQLFSNM--------------------------------------------NV 310
+G K AL+ F M NV
Sbjct: 294 YGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 353
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+ ++ T VS L ACS +++G ++ H + G+ ++D+ GR G I ++
Sbjct: 354 EVNTVTMVSALPACSKLAALRQGKEI-HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSR 412
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHG 396
++ MP + D V W+V++ HG
Sbjct: 413 RIFDLMP-QRDLVSWNVMISVYGMHG 437
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 151/311 (48%), Gaps = 36/311 (11%)
Query: 88 NAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANA 143
N +EC ++ S+LQ C L+ G VHA + +D ++ +
Sbjct: 5 NPDECIEIYASILQ--------------KCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSR 50
Query: 144 LINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
L+ +Y ++ C ++A ++F+ M RNV SW +++ E++ + + EE +
Sbjct: 51 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIM-------------EMYCGLGDYEETIK 97
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
LF + EG+ PD F V KAC+ L R V+ + GFE ++ + +++ +
Sbjct: 98 LFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFI 157
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
+CG + ++++ F+++ + D+ WN ++ Y G+ K+AL +F M V+P+S T S
Sbjct: 158 KCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIAS 217
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+SAC++ L++ G ++ ++ + L +VD + R +E + M +
Sbjct: 218 AVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKC-RSVEVARRKFGMIKQ 276
Query: 380 PDSVIWSVLLG 390
D V W+ +L
Sbjct: 277 TDLVSWNAMLA 287
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 331/560 (59%), Gaps = 32/560 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+++ ++ YAK L+ AR FD MP+R+VVSW A++SGYAQ+G AEE RLF +
Sbjct: 192 RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM 251
Query: 100 LQYFF-PNEFSLASVLISCDY-----LHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
+ P+E + +V+ +C L LV L K + + +V AL++MY+K
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK-RIQLNCFVRTALLDMYAKFGD 310
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A K+F M RNV++WNSMIA + A AIELF +M + + +
Sbjct: 311 LDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEM------------ITAKKL 358
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD T V+ AC L + V + + + NA+I Y+RCGS+ +K+
Sbjct: 359 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 418
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VF +M D+VS+N+++ +A HG EA+ L S M ++PD TF+ +L+ACSHAGL
Sbjct: 419 VFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 478
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++EG KVF S+ + P +DHYACMVDLLGRVG + +A++ + MPMEP + ++ LL
Sbjct: 479 LEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 533
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+ R H + L ELAA KL +LEP +S F+ +SNIY +G + IR+ MK V+K
Sbjct: 534 NASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKK 593
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SW+E ++H+F + H + + I++ L EL +++ GY+ + S L D+EEE
Sbjct: 594 TTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEE 653
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KEE + HSEKLA+ +A++ + +VIR++KN+R+C DCH +K+ S L G+ I+V
Sbjct: 654 KEEIVGTHSEKLAICYALL----VSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIV 709
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFH F D +CSC DYW
Sbjct: 710 RDNNRFHCFNDGLCSCKDYW 729
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 173/350 (49%), Gaps = 43/350 (12%)
Query: 8 YATLFHACALHGNIKQAMQL----HEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ T+ AC+ G+ A L H+ I + FV L++MYAKFG LD AR
Sbjct: 263 WVTVISACSSRGDPCLAASLVRTLHQKRIQ------LNCFVRTALLDMYAKFGDLDSARK 316
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCDYLH 121
LF+ MP RNVV+W ++I+GYAQ+G + LF ++ + P+E ++ SV+ +C +L
Sbjct: 317 LFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 376
Query: 122 GKLVHALALKFSLDAHVYVA----NALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
+ ++F + + ++ NA+I MYS+ ++A +VF+ M R+V+S+N++I+
Sbjct: 377 ALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLIS 436
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERH 234
F A +AI L + MK G+ PD TF VL AC AGL+ E
Sbjct: 437 GFAAHGHGVEAINLMSTMK-------------EGGIEPDRVTFIGVLTACSHAGLLEE-- 481
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYA 293
V I + + + L R G + +K+ ++M + S+L A
Sbjct: 482 GRKVFESIKDPAIDHYACMVDLL----GRVGELEDAKRTMERMPMEPHAGVYGSLLNASR 537
Query: 294 LHGQAKEALQLFSN--MNVQPD-SATFVSLLSACSHAGLVQEGNKVFHSM 340
+H Q E +L +N ++PD S F+ L + + AG ++ ++ +M
Sbjct: 538 IHKQV-ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAM 586
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 69/393 (17%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDL--FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSW 76
GN QLH +I+N + + NH + A Y LF+ NV +
Sbjct: 12 GNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHY---THLLFNSTLNPNVFVF 68
Query: 77 TALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDA 136
T+++ Y+ + + ++ + + + +LI G HA LK +
Sbjct: 69 TSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLKLGHGS 128
Query: 137 HVYVANALINMYSK-SCADEAWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAK 193
+V NA+I+MY++ A KVF+ + R V WN+M++ + + E QA LF
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
M E + +
Sbjct: 189 MP----------------------------------------------------ERNVIT 196
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
A++ YA+ + +++ FD M +VSWN++L YA +G A+EAL+LF M +
Sbjct: 197 WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGI 256
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILE 368
+PD T+V+++SACS G + ++ H QL+ + ++D+ + G +
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTL---HQKRIQLNCFVRTALLDMYAKFGDLDS 313
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
A KL MP + V W+ ++ ++G++ +A
Sbjct: 314 ARKLFNTMPGR-NVVTWNSMIAGYAQNGQSAMA 345
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 146/339 (43%), Gaps = 34/339 (10%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMI 175
++ H + +HA + SL H Y LIN ++ A + +F + NV + SM+
Sbjct: 13 NFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSML 72
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
++ +++ + + ++ Q+Q G+ PD + I++K+
Sbjct: 73 -------------RFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGG 114
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD--LVSWNSILKAYA 293
H+ + K G D + NA+I YAR G I +++VFD++ ++ + WN+++ Y
Sbjct: 115 IGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYW 174
Query: 294 LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+A LF M + + T+ ++++ + ++ + F M E V +
Sbjct: 175 KWESEGQAQWLFDVMP-ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVV-----SW 228
Query: 354 ACMVDLLGRVGRILEAEKLIREM---PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
M+ + G EA +L EM +EPD W ++ +C G+ LA L Q
Sbjct: 229 NAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQ 288
Query: 411 LEPGDSLGFVQMS--NIYCLSGSFNKARLIRKEMKGSRV 447
+ FV+ + ++Y G + AR + M G V
Sbjct: 289 KRIQLNC-FVRTALLDMYAKFGDLDSARKLFNTMPGRNV 326
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/560 (38%), Positives = 327/560 (58%), Gaps = 28/560 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++FV N L++ Y+K LD+ + LF EM +R+ VS+ +I+GYA + A RLF +
Sbjct: 273 SNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREM 332
Query: 100 LQYFFPNEF----SLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
F + SL SV S ++ GK +HA + L + V NALI+MYSK C
Sbjct: 333 QSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSK-CGM 391
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A F N + +SW +MI C Q +EEAL LF ++R G+
Sbjct: 392 LDAAKTNFINKNDKTGVSWTAMITG---CVQNGQ----------QEEALQLFCGMRRAGL 438
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+PD TFS +KA + L +HS + + G +AL+ Y +CG + + Q
Sbjct: 439 SPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQ 498
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
FD+M + +SWN+++ AYA +GQAK A+++F M +PDS TF+S+LSACSH GL
Sbjct: 499 TFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGL 558
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+E K F M +G+ P +HY+C++D LGRVGR + ++++ EMP E D +IWS +L
Sbjct: 559 AEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSIL 618
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
SCR HG LA +AA KL + D+ +V +SNI+ +G + A ++K M+ +RK
Sbjct: 619 HSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRK 678
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SW+E++++V+ F+S + +P I +LE L ++ GY P+TS L ++++
Sbjct: 679 ETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDI 738
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K E L +HSE+LA+ FA++N + IR+MKN+ CVDCH+ +K+ S ++ ++I+V
Sbjct: 739 KLESLKYHSERLAIAFALINT----PPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIV 794
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RDS+RFHHFKD CSC DYW
Sbjct: 795 RDSSRFHHFKDGFCSCGDYW 814
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 31/374 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++ V N L++ Y K G L AR +F EMP R+ V++ A++ G ++ G+ E LF ++
Sbjct: 173 SNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAM 232
Query: 100 LQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ F+ ++VL D G+ VH L + + ++V+V N+L++ YSK C
Sbjct: 233 RRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCL 291
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN---EEEALFLFRQLQRE 210
DE K+F M R+ +S+N MIA + + + + LF +M++ + +AL L
Sbjct: 292 DEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVA 351
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G P G+ +H+ + G + ++ NALI Y++CG + +
Sbjct: 352 GSVPH-----------IGI-----GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAA 395
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
K F VSW +++ +GQ +EALQLF M + PD ATF S + A S+
Sbjct: 396 KTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNL 455
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
++ G ++ HS L G + + + ++D+ + G + EA + EMP E +S+ W+
Sbjct: 456 AMIGLGRQL-HSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP-ERNSISWNA 513
Query: 388 LLGSCRKHGETRLA 401
++ + +G+ + A
Sbjct: 514 VISAYAHYGQAKNA 527
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 31/237 (13%)
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
R+ ++W MI AF + A +A+ LFR + REG+APD T + VL
Sbjct: 96 LRDAVTWTVMIGAFAS-----------APGARASDAVSLFRDMLREGVAPDRVTVATVLN 144
Query: 225 ---ACAGLVTERHASAVHSLIAKYGF-EDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
A G +++H K G + V+ N L+ AY + G ++ +++VF +M +
Sbjct: 145 LPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHR 204
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA---TFVSLLSACSHAGLVQEGNKVF 337
D V++N+++ + G EAL LF+ M + +A TF ++L+ + G + G +V
Sbjct: 205 DSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQV- 263
Query: 338 HSMLENHGVVPQLDHYACMV-----DLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
HG+V + V D + + E +KL EM +E D+V ++V++
Sbjct: 264 ------HGLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM-IERDNVSYNVMI 313
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKAYALHGQAKE 300
+ K GF+ T N L+H+ G ++ ++ +FD+M + ++ S N +L Y+ GQ
Sbjct: 25 MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSA 84
Query: 301 ALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKV--FHSMLENHGVVPQLDHYAC 355
A LF ++ P D+ T+ ++ A + A + + V F ML GV P A
Sbjct: 85 AHHLF--LSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLR-EGVAPDRVTVAT 141
Query: 356 MVDLLGRVGRILEAEKLIREMP-------MEPDSVIWSVLLGSCRKHG 396
+++L G A + P + + V+ + LL + KHG
Sbjct: 142 VLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHG 189
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 326/561 (58%), Gaps = 31/561 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
V N L+ Y K G LDDA+ +F M R+ VSW ++I Y QH + LF +++
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR 234
Query: 103 FFP-NEFSLASVL--ISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DE 155
+ F+LASVL +C D G H +K + +V + LI++YSK +
Sbjct: 235 GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSD 294
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
KVFE + +++ WN+M++ + +Q E E+AL FRQ+Q G P+
Sbjct: 295 CRKVFEEITEPDLVLWNTMVSGY------SQNEEFL------EDALECFRQMQGIGYRPN 342
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQVF 274
C+F V+ AC+ L + +HSL K + + + NALI Y++CG++ ++++F
Sbjct: 343 DCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLF 402
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D+M H+ VS NS++ YA HG E+L LF M + P S TF+S+LSAC+H G V+
Sbjct: 403 DRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVE 462
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F+ M E + P+ +HY+CM+DLLGR G++ EAE LI MP P S+ W+ LLG+
Sbjct: 463 EGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGA 522
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR HG LA AA ++ QLEP ++ +V +SN+Y +G + + +RK M+ V+K P
Sbjct: 523 CRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKP 582
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL---HDIEEE 508
G SWIE++ R+H F + HP + I++ LEE+ G++K GYVP+ AL
Sbjct: 583 GCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGG 642
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE +L HHSEKLA+ F +++ ++ + ++KN+RIC DCHN +K S + G+EI
Sbjct: 643 EKEIRLGHHSEKLAVAFGLIST----KDGEPVLVVKNLRICGDCHNAIKFISAIAGREIT 698
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD++RFH FK+ CSC DYW
Sbjct: 699 VRDAHRFHCFKEGQCSCGDYW 719
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 205/435 (47%), Gaps = 59/435 (13%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR- 62
+ Q + L C ++ LH I +F P + +NH I +Y+K G L AR
Sbjct: 7 TLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFI--PPSTYFSNHFILLYSKCGRLAWARK 64
Query: 63 ------------------------------HLFDEMPKRNVVSWTALISGYAQHGNAEEC 92
LFD++P+ ++VS+ LIS YA G
Sbjct: 65 AFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124
Query: 93 FRLFCSLLQYFFP-NEFSLASVLISC---DYLHGKLVHALALKFSLDAHVYVANALINMY 148
LF + + + F+L++V+ +C L G+L H++A+ D++V V NAL+ Y
Sbjct: 125 LGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQL-HSVAVSSGFDSYVSVNNALLTYY 183
Query: 149 SKSCA-DEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
K+ D+A +VF M R+ +SWNSMI A + + + +AL LF++
Sbjct: 184 GKNGDLDDAKRVFYGMGGIRDEVSWNSMIVA-------------YGQHQEGSKALGLFQE 230
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC-G 265
+ R G+ D T + VL A L H + K GF ++ + + LI Y++C G
Sbjct: 231 MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGG 290
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQ-AKEALQLFSNM---NVQPDSATFVSLL 321
+S ++VF+++T DLV WN+++ Y+ + + ++AL+ F M +P+ +FV ++
Sbjct: 291 GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVI 350
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
SACS+ +G ++ L++ ++ ++ + + G + +A +L M E +
Sbjct: 351 SACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHN 409
Query: 382 SVIWSVLLGSCRKHG 396
+V + ++ +HG
Sbjct: 410 TVSLNSMIAGYAQHG 424
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQ 311
NA+I AYA+ ++ Q+FD++ DLVS+N+++ AYA G+ AL LFS M +
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137
Query: 312 PDSATFVSLLSA-CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
D T ++++A C GL+ + HS+ + G + ++ G+ G + +A+
Sbjct: 138 MDGFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAK 193
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGE 397
++ M D V W+ ++ + +H E
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQE 220
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 326/561 (58%), Gaps = 31/561 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
V N L+ Y K G LDDA+ +F M R+ VSW ++I Y QH + LF +++
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR 234
Query: 103 FFP-NEFSLASVLI--SC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DE 155
+ F+LASVL +C D G H +K + +V + LI++YSK +
Sbjct: 235 GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSD 294
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
KVFE + +++ WN+M++ + +Q E E+AL FRQ+Q G P+
Sbjct: 295 CRKVFEEITEPDLVLWNTMVSGY------SQNEEFL------EDALECFRQMQGIGYRPN 342
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQVF 274
C+F V+ AC+ L + +HSL K + + + NALI Y++CG++ ++++F
Sbjct: 343 DCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLF 402
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D+M H+ VS NS++ YA HG E+L LF M + P S TF+S+LSAC+H G V+
Sbjct: 403 DRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVE 462
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F+ M E + P+ +HY+CM+DLLGR G++ EAE LI MP P S+ W+ LLG+
Sbjct: 463 EGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGA 522
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR HG LA AA ++ QLEP ++ +V +SN+Y +G + + +RK M+ V+K P
Sbjct: 523 CRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKP 582
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL---HDIEEE 508
G SWIE++ R+H F + HP + I++ LEE+ G++K GYVP+ AL
Sbjct: 583 GCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGG 642
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE +L HHSEKLA+ F +++ ++ + ++KN+RIC DCHN +K S + G+EI
Sbjct: 643 EKEIRLGHHSEKLAVAFGLIST----KDGEPVLVVKNLRICGDCHNAIKFISAIAGREIT 698
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD++RFH FK+ CSC DYW
Sbjct: 699 VRDAHRFHCFKEGQCSCGDYW 719
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 205/435 (47%), Gaps = 59/435 (13%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR- 62
+ Q + L C ++ LH I +F P + +NH I +Y+K G L AR
Sbjct: 7 TLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFI--PPSTYFSNHFILLYSKCGRLAWARK 64
Query: 63 ------------------------------HLFDEMPKRNVVSWTALISGYAQHGNAEEC 92
LFD++P+ ++VS+ LIS YA G
Sbjct: 65 AFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124
Query: 93 FRLFCSLLQYFFP-NEFSLASVLISC---DYLHGKLVHALALKFSLDAHVYVANALINMY 148
LF + + + F+L++V+ +C L G+L H++A+ D++V V NAL+ Y
Sbjct: 125 LGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQL-HSVAVSSGFDSYVSVNNALLTYY 183
Query: 149 SKSCA-DEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
K+ D+A +VF M R+ +SWNSMI A + + + +AL LF++
Sbjct: 184 GKNGDLDDAKRVFYGMGGIRDEVSWNSMIVA-------------YGQHQEGSKALGLFQE 230
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC-G 265
+ R G+ D T + VL A L H + K GF ++ + + LI Y++C G
Sbjct: 231 MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGG 290
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQ-AKEALQLFSNM---NVQPDSATFVSLL 321
+S ++VF+++T DLV WN+++ Y+ + + ++AL+ F M +P+ +FV ++
Sbjct: 291 GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVI 350
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
SACS+ +G ++ L++ ++ ++ + + G + +A +L M E +
Sbjct: 351 SACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHN 409
Query: 382 SVIWSVLLGSCRKHG 396
+V + ++ +HG
Sbjct: 410 TVSLNSMIAGYAQHG 424
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQ 311
NA+I AYA+ ++ Q+FD++ DLVS+N+++ AYA G+ AL LFS M +
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137
Query: 312 PDSATFVSLLSA-CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
D T ++++A C GL+ + HS+ + G + ++ G+ G + +A+
Sbjct: 138 MDXFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAK 193
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGE 397
++ M D V W+ ++ + +H E
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQE 220
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 329/562 (58%), Gaps = 32/562 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
V N L+ Y+K G L++A +F+ M + R+ VSW ++I Y QH + L+ ++
Sbjct: 175 VKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVH 234
Query: 102 YFFP-NEFSLASVL--ISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
F + F+LASVL SC D G HA A+K + + +V + LI+MY+K A
Sbjct: 235 RGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMS 294
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
E+ KVFE + +++ WN+MI+ + +Q EL EAL FRQ+QR G P
Sbjct: 295 ESRKVFEEICGSDLVVWNTMISGY------SQNKEL------SVEALECFRQMQRAGYWP 342
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQV 273
D C+F + AC+ L + H+L K + + + NAL+ Y++CG++ ++++
Sbjct: 343 DDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKL 402
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F +M H+ V+ NSI+ YA HG E+L LF M ++ P S T VS+LSAC+H G V
Sbjct: 403 FQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRV 462
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG K F+ M + G+ P+ +HY+CM+DLLGR G++ EAE+LI MP P S W+ LLG
Sbjct: 463 EEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLG 522
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CRK+G LAE AA + QLEP +++ ++ ++++Y + + +A IRK M+ +RK
Sbjct: 523 ACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKK 582
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL---HDIEE 507
PG SWIE+ RVH F + HP+ + I L+E+ ++K GYVP+ A + E
Sbjct: 583 PGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGE 642
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
+ KE L HHSEKLA+ F ++ + + ++KN+RIC DCHN +K S + ++I
Sbjct: 643 QEKEIMLAHHSEKLAVAFGLL----FTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKI 698
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
VRD+ RFH F+D CSC DYW
Sbjct: 699 TVRDAYRFHCFEDGRCSCGDYW 720
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 197/379 (51%), Gaps = 28/379 (7%)
Query: 30 HMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNA 89
H N +EP ++F N LI YAK + A HLFD++P+ ++VS+ LI+ YA G+
Sbjct: 63 HHAFNQTHEP-NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDT 121
Query: 90 EECFRLFCSLLQY-FFPNEFSLASVLISCDYLHG--KLVHALALKFSLDAHVYVANALIN 146
LF + + + F+ + V+ +C G + +H+LA D++V V N+L+
Sbjct: 122 LSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLT 181
Query: 147 MYSKS-CADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFL 203
YSK+ +EA VF M E R+ +SWNSMI A+ K +A+ L+ M + + +
Sbjct: 182 YYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM 241
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
F +A TFS V GL + HA A+ K GF + + + LI YA+
Sbjct: 242 FT------LASVLTTFSCVEDLSGGL--QFHAKAI-----KTGFNKNRHVGSGLIDMYAK 288
Query: 264 CGS-ISLSKQVFDKMTYHDLVSWNSILKAYALHGQ-AKEALQLFSNM---NVQPDSATFV 318
CG+ +S S++VF+++ DLV WN+++ Y+ + + + EAL+ F M PD +FV
Sbjct: 289 CGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFV 348
Query: 319 SLLSACSHAGLVQEGNKVFHSM-LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
+SACS+ +G K FH++ +++ Q+ +V + + G + +A KL + MP
Sbjct: 349 CAISACSNLSSPSQG-KQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407
Query: 378 MEPDSVIWSVLLGSCRKHG 396
+ S++ G +HG
Sbjct: 408 QHNTVTLNSIIAGYA-QHG 425
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 37/326 (11%)
Query: 109 SLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENM 163
S +L SC D L GK +H + LK + + Y++N I +YSK + A F
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFR 205
NV S+N++IAA+ L A LF ++ + AL LF
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 206 QLQREGMAPDWCTFSIVLKAC---AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+++ G+ D TFS V+ AC GL+ + +HSL GF+ + N+L+ Y+
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQ-----LHSLAFSSGFDSYVSVKNSLLTYYS 184
Query: 263 RCGSISLSKQVFDKMT--YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
+ G + ++ VF+ M D VSWNS++ AY H + +AL L+ +M + D T
Sbjct: 185 KNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTL 244
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
S+L+ S + G + FH+ G + ++D+ + G + + + E
Sbjct: 245 ASVLTTFSCVEDLSGGLQ-FHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEI 303
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAEL 403
D V+W+ ++ ++ E + L
Sbjct: 304 CGSDLVVWNTMISGYSQNKELSVEAL 329
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 339/594 (57%), Gaps = 34/594 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC + K + LH ++ N D+ L+++Y+ G L+DA LFDE
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFN--HDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHG 122
+P R+VV+WTAL SGY G E LF +++ P+ + + VL +C D G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ + + + + +V L+N+Y+K C ++A VF++M +++++W++MI + +
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAK-CGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV--LKACAGLVTERHASAV 238
+ IELF Q+ +E + PD FSIV L +CA L
Sbjct: 291 NSFPKEGIELFL-------------QMLQENLKPD--QFSIVGFLSSCASLGALDLGEWG 335
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
SLI ++ F + +ANALI YA+CG+++ +VF +M D+V N+ + A +G
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 299 KEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
K + +F + + PD +TF+ LL C HAGL+Q+G + F+++ + + ++HY C
Sbjct: 396 KLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGC 455
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDL GR G + +A +LI +MPM P++++W LL CR +T+LAE +L LEP +
Sbjct: 456 MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWN 515
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +VQ+SNIY + G +++A +R M ++K PG SWIE+E +VHEF + K HP
Sbjct: 516 AGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLS 575
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+ KLE+L +++ MG+VP T D+EEE KE L +HSEKLA+ +++
Sbjct: 576 DKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIST----D 631
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
VIR++KN+R+C DCH MKL S + +EIVVRD+NRFH F + CSCNDYW
Sbjct: 632 HGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 189/405 (46%), Gaps = 30/405 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
QI + AC + Q+H +IN+ + D F+ N L+ F + LF
Sbjct: 15 QIKTLISVACT----VNHLKQIHVSLINHHLH--HDTFLVNLLLKRTLFFRQTKYSYLLF 68
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH--- 121
N+ + +LI+G+ + E LF S+ ++ + + F+ VL +C
Sbjct: 69 SHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRK 128
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFR 179
G +H+L +K + V +L+++YS S ++A K+F+ + R+V++W ++ + +
Sbjct: 129 LGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT 188
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+AI+LF KM G+ PD VL AC + +
Sbjct: 189 TSGRHREAIDLFKKM-------------VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + + ++ + L++ YA+CG + ++ VFD M D+V+W+++++ YA + K
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
E ++LF M N++PD + V LS+C+ G + G S+++ H + L +
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANAL 354
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+D+ + G + ++ +EM E D VI + + K+G +L+
Sbjct: 355 IDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLS 398
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/597 (34%), Positives = 324/597 (54%), Gaps = 29/597 (4%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
H+ + ++ +C G+++ QLH ++ D ++ L+++YA G + AR
Sbjct: 60 HAYHHHTSILQSCVASGSLRAGRQLHGRLL--VSGLGPDTVLSTKLVDLYAACGQVGHAR 117
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC---- 117
LFD MPKRNV W LI YA+ G E RL+ ++++ P+ F+ VL +C
Sbjct: 118 RLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALL 177
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
D G+ VH V+V +++MY+K C D+A VF+ + R+ + WNSMIA
Sbjct: 178 DLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIA 237
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A+ + EAL L R + G+ P T + A A
Sbjct: 238 AY-------------GQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGR 284
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H + GF + +L+ YA+ G + +++ +F+++ +LVSWN+++ Y +HG
Sbjct: 285 ELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHG 344
Query: 297 QAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
A EAL LF+ M V PD+ TFV +LSAC+H G+V+E + F+ M+ + + P + H
Sbjct: 345 HADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQH 404
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y C++D+LG GR EA LI+ M +EPDS IW LL C+ H L ELA KL +LE
Sbjct: 405 YTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELE 464
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
P D+ +V +SNIY SG + KA +RK M ++K SWIE++ + H F G H
Sbjct: 465 PEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASH 524
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+ + I+ +LE L G + GYVP+ H+++++ K + HSE+LA+ F +++
Sbjct: 525 PRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPP 584
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + + KN+R+C DCH +KL S ++ +EI++RD NR+HHF + CSC DYW
Sbjct: 585 GTK----LLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/567 (37%), Positives = 326/567 (57%), Gaps = 35/567 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS- 98
+D + L+ YA+ L AR FD + +VVSW A+ + Y QH E LF
Sbjct: 253 RDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERM 312
Query: 99 LLQYFFPNEFSLASVLISCDYLH-------GKLVHALALKFSLDAHVYVANALINMYSK- 150
LL+ P+ + + L +C GK + +L + L+ VANA +NMY+K
Sbjct: 313 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 372
Query: 151 -SCADEAWKVFENME--FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
S AD A VFE + R+ I+WNSM+AA+ L +A ELF M+ E+
Sbjct: 373 GSLAD-ARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKL-------- 423
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ P+ TF VL A + +H+ + GFE DTVI NAL++ YA+CGS+
Sbjct: 424 ----VKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSL 479
Query: 268 SLSKQVFDKMTYH--DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
++ +FDK + + D+++W S++ YA +GQA+ AL+LF M V+P+ TF+S L+
Sbjct: 480 DDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALT 539
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC+H G +++G ++ M +HG+VP H++C+VDLLGR GR+ EAEKL+ E + D
Sbjct: 540 ACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADV 598
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ W LL +C+ E E A ++ QL+P + ++ ++++Y +G +N+A IRK M
Sbjct: 599 ITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTM 658
Query: 443 KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL 502
+R PG S +E+ +H F++G K HP+ E I+ +LE L +K GYV +T L L
Sbjct: 659 LDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVL 718
Query: 503 HDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDL 562
HD+ +EHKE L HSEKLA+ F +M+ S S +R++KN+R+C DCH KL S +
Sbjct: 719 HDVSQEHKERLLMRHSEKLAIAFGLMSTPS----GSPLRVIKNLRVCSDCHTATKLISKV 774
Query: 563 LGKEIVVRDSNRFHHFKDRICSCNDYW 589
G++I++RDS+R+HHF CSC DYW
Sbjct: 775 TGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 195/414 (47%), Gaps = 48/414 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP- 69
L +AC+ GN+ ++H + + + ++ + N LI+MY+K G L DA+ FD +P
Sbjct: 13 LVNACSCLGNLAAGRRIHSQISDR--DFEENSVLGNALISMYSKCGSLIDAKQAFDRLPR 70
Query: 70 --KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP--NEFSLASVLISC-------- 117
KR+VV+W A+IS + ++G+A E +LF + P N + SVL SC
Sbjct: 71 ASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSL 130
Query: 118 ---DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF----ENMEFRNVI 169
+HG++V A ++ +V AL++ Y K D+AW+VF + +++
Sbjct: 131 EDVRAIHGRIVGA-----GIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLV 185
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
+ ++MI+A C +E+L LF + EG P T VL AC+ L
Sbjct: 186 TCSAMISA---CWQNGW----------PQESLRLFYAMNLEGTKPSGVTLVSVLNACSML 232
Query: 230 -VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
V A + + D V+ L+ YAR +S ++ FD + D+VSWN++
Sbjct: 233 PVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAM 292
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS--HAGLVQEGNKVFHSMLEN 343
AY H + +EAL LF M V+P ATF++ L+AC+ K S+LE
Sbjct: 293 AAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEE 352
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLI-REMPMEPDSVIWSVLLGSCRKHG 396
G+ +++ + G + +A + R P D + W+ +L + HG
Sbjct: 353 AGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG 406
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 18/186 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + A +I Q ++H +++N D + N L+NMYAK G LDDA+ +FD+
Sbjct: 431 FVAVLDASTSRTSIAQGREIHARVVSN--GFESDTVIQNALLNMYAKCGSLDDAQAIFDK 488
Query: 68 MP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKL 124
+ +V++WT+L++GYAQ+G AE +LF ++ Q PN + S L +C++ GKL
Sbjct: 489 SSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNH-GGKL 547
Query: 125 VHALAL--KFSLDAHVYVA----NALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
L + D + A + ++++ + C DEA K+ E +VI+W +A
Sbjct: 548 EQGCELLSGMTPDHGIVPASKHFSCIVDLLGR-CGRLDEAEKLLERTSQADVITW---MA 603
Query: 177 AFRACK 182
ACK
Sbjct: 604 LLDACK 609
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 340/594 (57%), Gaps = 34/594 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC N K + LH ++ N D+ L+++Y+ G L+DA +F+E
Sbjct: 114 FPLVLKACTRASNRKLGIDLHSLVVKCGFN--HDVAAMTSLLSIYSGSGRLNDAHKVFEE 171
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHG 122
+P+R+VV+WTAL SGY G E LF +++ P+ + + VL +C D G
Sbjct: 172 IPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSG 231
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ + + + + +V L+N+Y+K C ++A VF++M +++++W++MI + +
Sbjct: 232 EWIVKHMEEMEMQKNSFVRTTLVNLYAK-CGKMEKARSVFDSMGEKDIVTWSTMIQGYAS 290
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV--LKACAGLVTERHASAV 238
+ IE F Q+ +E + PD FSIV L +CA L
Sbjct: 291 NSFPKEGIEFFL-------------QMLQENLKPD--QFSIVGFLSSCASLGALDLGEWG 335
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
SLI ++ F + +ANALI YA+CG+++ +VF +M D+V N+ + A +G
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 299 KEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
K + +F + + PD +TF+ LL C HAGL+Q+G + F+++ + + ++HY C
Sbjct: 396 KLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGC 455
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDL GR G + +A +LI +MPM P++++W LL CR +T+LAE +L LEP +
Sbjct: 456 MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWN 515
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +VQ+SNIY +SG +++A +R M ++K PG SWIE+E VHEF + K HP
Sbjct: 516 AGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLS 575
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+ KLE+L +++ MG+VP T D+E+E KE L HHSEKLA+ F +++
Sbjct: 576 DKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLIST----D 631
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
VIR++KN+R+C DCH MKL S + +EIVVRD+NRFH F + CSCNDYW
Sbjct: 632 HGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 172/370 (46%), Gaps = 24/370 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D F+ N L+ F + LF N+ + LI+G+ + E LF S+
Sbjct: 44 DTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIR 103
Query: 101 QYFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC-AD 154
++ + F+ VL +C G +H+L +K + V +L+++YS S +
Sbjct: 104 KHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A KVFE + R+V++W ++ + + +AI+LF KM G+ P
Sbjct: 164 DAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKM-------------VEMGVRP 210
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D VL AC + + + + + ++ + L++ YA+CG + ++ VF
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF 270
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M D+V+W+++++ YA + KE ++ F M N++PD + V LS+C+ G +
Sbjct: 271 DSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALD 330
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G S+++ H + L ++D+ + G + ++ +EM E D VI + +
Sbjct: 331 LGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISG 388
Query: 392 CRKHGETRLA 401
K+G +L+
Sbjct: 389 LAKNGHVKLS 398
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 336/589 (57%), Gaps = 30/589 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ A N+ M++H + I + + ++ + N LI+MY K + F+ MP+
Sbjct: 358 MIAASGRSANLLAGMEVHAYAIKHGID--SNMHIGNSLIDMYGKCCCVKYMGSAFEYMPE 415
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHG----KLV 125
++++SWT +I+GYAQ+ + L + L+ + + S+L++C L K +
Sbjct: 416 KDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEI 475
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H LK L A + + NA++N+Y + + D A VFE++ ++++SW SMI C
Sbjct: 476 HGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITC---CVHN 531
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
AIE AL LF L + PD T VL A A L + + +H + +
Sbjct: 532 GLAIE----------ALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIR 581
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GF + +IAN+L+ YARCG++ ++ +F+ + DL+ W S++ A +HG K+A+ L
Sbjct: 582 KGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDL 641
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
FS M NV PD TF++LL ACSH+GLV EG + F M + + P +HYAC+VDLL
Sbjct: 642 FSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLA 701
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R + EA +R MP+EP + +W LLG+CR H L E+AA KL QL +S +V
Sbjct: 702 RSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVL 761
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SN + G +N +R MKG++++K PG SWIE+EN++H F + K HPQ I+ K
Sbjct: 762 VSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLK 821
Query: 482 LEELIGQLKGM-GYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
L + LK GY +T L HD+ EE K + LY HSE+LAL + ++ + + + +
Sbjct: 822 LAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLL----VTSKGTCL 877
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RI KN+RIC DCH F K+AS++ + +VVRD++RFHHF+ +CSC D+W
Sbjct: 878 RITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 220/469 (46%), Gaps = 34/469 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q Y+ CA H + Q QLH H + N +F+ ++MY K G DA +F
Sbjct: 47 QAYSQALELCASHKALPQGQQLHAHFLKT-QNYLDSVFLDTKFVHMYGKCGSFYDAVKVF 105
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH--- 121
D+M +R + +W A+I G E L+ + + F+ VL +C
Sbjct: 106 DKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERR 165
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFEN--MEFRNVISWNSMIA 176
G +H +A+K V+V NALI MY+K C D A +F++ ME + +SWNS+I+
Sbjct: 166 LGCEIHGVAVKCGYGGFVFVCNALIAMYAK-CGDLGGARVLFDSGLMEKDDPVSWNSIIS 224
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A E +++E AL LFR++Q G+ + TF L+AC G +
Sbjct: 225 AHVG---EGESLE----------ALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGR 271
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H++I K D ++NALI YA CG + +++VF M + D VSWN++L +
Sbjct: 272 GIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQND 331
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+A+ F +M +PD + +++++A + + G +V H+ HG+ +
Sbjct: 332 MYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEV-HAYAIKHGIDSNMHIG 390
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
++D+ G+ + MP E D + W+ ++ ++ E L L + QLE
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMP-EKDLISWTTIIAGYAQN-ECHLDALNLLRKVQLEK 448
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
D + S + SG K+ + KE+ G ++ GL+ I I+N +
Sbjct: 449 MDVDPMMIGSILLACSGL--KSEKLIKEIHGYVLKG--GLADILIQNAI 493
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/578 (37%), Positives = 327/578 (56%), Gaps = 36/578 (6%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G +K+A +L + + EP + L+ +G + A F++MP +++ SW
Sbjct: 119 GKVKEAHELFDKI-----PEPDSVSYNIMLVCYLRSYG-VKAALAFFNKMPVKDIASWNT 172
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVHALALKFSLD-A 136
LISG+AQ+G ++ F LF + P + ++ S +IS HG L A L ++
Sbjct: 173 LISGFAQNGQMQKAFDLFSVM-----PEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMK 227
Query: 137 HVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKM 194
V V A++ Y K E A ++F+ M +N+++WNSMIA + C+
Sbjct: 228 SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCR------------ 275
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
E+ L +F+ + + P+ + S VL C+ L +H L++K DT
Sbjct: 276 --AEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTAC 333
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
+LI Y +CG + + ++F +M D+++WN+++ YA HG ++AL LF M ++
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
PD TFV+++ AC+HAG V G + F SM + G+ + HY C++DLLGR GR+ EA
Sbjct: 394 PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVS 453
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
LI+EMP P + I+ LLG+CR H LAE AA L L+P + G+VQ++NIY +
Sbjct: 454 LIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNK 513
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG 491
+++ +RK MK V K PG SWIEI++ HEF S + HP+ +I KKL EL G++K
Sbjct: 514 WDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKL 573
Query: 492 MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GYVP+ ALHD+EEEHKE+ L HSEKLA+ F +M + IR+ KN+R+C D
Sbjct: 574 AGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAP----GTPIRVFKNLRVCGD 629
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH +K S + +EI+VRD+ RFHHF++ CSC DYW
Sbjct: 630 CHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA-LHGQAKEALQLFSNM 308
D V N I ++ R + ++ VF+KM+ V+WN++L Y + G+ KEA +LF +
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+PDS ++ +L + V+ F+ M V + + ++ + G++ +
Sbjct: 132 P-EPDSVSYNIMLVCYLRSYGVKAALAFFNKM-----PVKDIASWNTLISGFAQNGQMQK 185
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
A L MP E + V WS ++ +HG+ AE
Sbjct: 186 AFDLFSVMP-EKNGVSWSAMISGYVEHGDLEAAE 218
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/600 (34%), Positives = 335/600 (55%), Gaps = 24/600 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+ AC+ + ++H ++ + + + FV + L++MYA + AR +FD
Sbjct: 285 FASALPACSRLEMLALGREMHAVVLKD-ADLAANSFVASALVDMYAGNEKVASARRVFDM 343
Query: 68 MPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQYF--FPNEFSLASVLISCDYLHG- 122
+P+ R + W A+I GYAQ G EE LF + P+E +++ VL +C G
Sbjct: 344 VPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGF 403
Query: 123 ---KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ +H +K + + +V NAL++MY++ D A ++F ++ R+V+SWN++I
Sbjct: 404 AGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGC 463
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA----PDWCTFSIVLKACAGLVTERH 234
A+A +L +M+ + + EG A P+ T +L CA L
Sbjct: 464 VVQGHAAEAFQLVTEMQLPSPSPSSSSTTE-EGEAHRCMPNNITLMTLLPGCAALAAPAR 522
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H ++ E D + +AL+ YA+CG ++ S+ VFD++ ++++WN ++ AY +
Sbjct: 523 GKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGM 582
Query: 295 HGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG EA+ LF M P+ TF++ L+ACSH+GLV G ++FH M +HGV P
Sbjct: 583 HGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTP 642
Query: 351 DHYACMVDLLGRVGRILEAEKLIREM-PMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
D +AC+VD+LGR GR+ EA +I M P E WS LLG+CR H L E+AA +L
Sbjct: 643 DLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLF 702
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
+LEPG++ +V + NIY +G ++K+ +R M+ V K PG SWIE++ +H F +G
Sbjct: 703 ELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGE 762
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
HP + ++ L +++ GY P+TS LHD++E+ K L +HSEKLA+ F ++
Sbjct: 763 SSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLR 822
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+R+C DCH K S ++G++IV+RD RFHHF+D CSC DYW
Sbjct: 823 ----APPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 188/397 (47%), Gaps = 48/397 (12%)
Query: 34 NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR------NVVSWTALISGYAQHG 87
F +E ++ F N L++MYA+ G +DDA+ LF +VV+W +IS Q G
Sbjct: 202 GFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGG 261
Query: 88 NAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFS-LDAHVYVA 141
E + ++ P+ + AS L +C L G+ +HA+ LK + L A+ +VA
Sbjct: 262 RCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVA 321
Query: 142 NALINMYSKS-CADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
+AL++MY+ + A +VF+ + R + WN+MI + ++ +A+ELF++M+ E
Sbjct: 322 SALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAE- 380
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
G AP T S VL ACA A+H + K G + + NAL+
Sbjct: 381 -----------AGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALM 429
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV-------- 310
YAR G + +++++F + D+VSWN+++ + G A EA QL + M +
Sbjct: 430 DMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSS 489
Query: 311 -----------QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
P++ T ++LL C+ G ++ H H + + + +VD+
Sbjct: 490 STTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEI-HGYAVRHALESDIAVGSALVDM 548
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ G + + + +P + + W+VL+ + HG
Sbjct: 549 YAKCGCLAASRAVFDRLPRR-NVITWNVLIMAYGMHG 584
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 47/383 (12%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK--RNVVSWTALISG---YAQHGNAEECFRLFCS 98
V N L+ YA+ G LD A LF R+ VS+ +LIS + Q A + R +
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161
Query: 99 LLQYFFPNEFSLASVLISCDYLH-------GKLVHALALKFS-LDA--HVYVANALINMY 148
++ + F+L SVL++C +L G+ HA ALK LD + NAL++MY
Sbjct: 162 EGRHDV-SSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMY 220
Query: 149 SK-SCADEAWKVFENMEFR------NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEAL 201
++ D+A +F +V++WN+MI+ A+A+E+ M +
Sbjct: 221 ARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVS----- 275
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG-FEDDTVIANALIHA 260
G+ PD TF+ L AC+ L +H+++ K ++ +A+AL+
Sbjct: 276 --------LGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDM 327
Query: 261 YARCGSISLSKQVFDKM--TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ----PDS 314
YA ++ +++VFD + L WN+++ YA G +EAL+LFS M + P
Sbjct: 328 YAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSE 387
Query: 315 ATFVSLLSACSHA-GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T +L AC+ + G G + H + G+ ++D+ R+G ++ + I
Sbjct: 388 TTMSGVLPACARSEGFA--GKEAMHGYVVKRGMAGNRFVQNALMDMYARLGE-MDVARRI 444
Query: 374 REMPMEPDSVIWSVLLGSCRKHG 396
M D V W+ L+ C G
Sbjct: 445 FAMIDPRDVVSWNTLITGCVVQG 467
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 39/289 (13%)
Query: 125 VHALALKFSL--DAHVYVANALINMYSK---SCADEAWKVFENMEFRNVISWNSMIAAFR 179
+HA AL+ +L V NAL+ Y++ A A E R+ +S+NS+I+A
Sbjct: 85 LHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL- 143
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV--LKACAGLVTE---RH 234
C LF + E AL R + EG D +F++V L AC+ L + R
Sbjct: 144 -C--------LF---RQWERALDALRDMLAEGRH-DVSSFTLVSVLLACSHLPGDDGRRL 190
Query: 235 ASAVHSLIAKYGFEDDT---VIANALIHAYARCGSISLSKQVFDKMTY------HDLVSW 285
H+ K GF D+ NAL+ YAR G + ++ +F D+V+W
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250
Query: 286 NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
N+++ G+ EA+++ +M V+PD TF S L ACS ++ G ++ +L+
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI--WSVLL 389
+ + + +VD+ ++ A ++ +P EP + W+ ++
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVP-EPSRQLGMWNAMI 358
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/558 (37%), Positives = 332/558 (59%), Gaps = 27/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D ++ N ++ M+ K G + DAR LFDEMP+RN+VSW +ISG G+ E FRLF ++
Sbjct: 9 DQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMW 68
Query: 101 QYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ F F+ A ++ + L G+ +HA LK + ++V+ ALI+MYSK +
Sbjct: 69 EEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIE 128
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A VFE M + + WN++IA + A EEAL ++ +++ G+
Sbjct: 129 DARFVFEEMPEKTTVGWNTIIAGY-------------ALHGYSEEALDMYYEMRDSGVKM 175
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D TFS++++ CA L + HA H+ + ++GF D V AL+ Y++ G I ++ VF
Sbjct: 176 DHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVF 235
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
DKM +++SWN+++ Y HG+ EA++LF M + P+ TF+++LSACSH+GL +
Sbjct: 236 DKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSE 295
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G ++F SM ++ + P+ HYACM++L+GR G + EA LIR P +P + +W+ LL +
Sbjct: 296 RGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTA 355
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR + L + AA KL +EP ++ + NIY +G+ +A + +K +R P
Sbjct: 356 CRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRP 415
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
SWIE++ R H F SG RHPQR+ I++K+++L+ ++ GYVP L D++E+ +
Sbjct: 416 VCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEER 475
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+LY HSEKLA+ F +++ + ++I++ RIC DCH +KL + + G+EIV+RD
Sbjct: 476 VRLY-HSEKLAIAFGLISTPYW----APLQIVQGHRICGDCHEAIKLIARVTGREIVIRD 530
Query: 572 SNRFHHFKDRICSCNDYW 589
+ RFHHFK CSC DYW
Sbjct: 531 AGRFHHFKHGHCSCEDYW 548
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
GFE D + N ++ + +CG + ++++FD+M +LVSWN+I+ G EA +LF
Sbjct: 5 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 64
Query: 306 SNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
NM + S TF ++ A + L+ G ++ H+ G+ + ++D+ +
Sbjct: 65 LNMWEEFSDAGSFTFAVMIRASAGLELISIGRQL-HACTLKMGIGDDIFVSCALIDMYSK 123
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G I +A + EMP E +V W+ ++ HG
Sbjct: 124 CGSIEDARFVFEEMP-EKTTVGWNTIIAGYALHG 156
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 331/561 (59%), Gaps = 32/561 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH----GNAEECFRLFCSL 99
V+N L+ +YA+ GYL++ R +F MP+ + VSW ++I A+ A CF
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 100 LQYFFPNEFSLASVLISCDYLH--GKLVHALALKFSLDAHVYVANALINMYSKSCA--DE 155
Q FS +S GK +H LALK ++ NALI Y K C D
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGK-CGEMDG 570
Query: 156 AWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
K+F M E R+ ++WNSMI+ + +L A+A++L F+ + QR
Sbjct: 571 CEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL---------VWFMLQTGQR----L 617
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D ++ VL A A + T VH+ + E D V+ +AL+ Y++CG + + + F
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ----PDSATFVSLLSACSHAGLV 330
+ M + SWNS++ YA HGQ +EAL+LF M + PD TFV +LSACSHAGL+
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG K F SM +++G+ P+++H++CM D+LGR G + + E I +MPM+P+ +IW +LG
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 391 SC-RKHG-ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
+C R +G + L + AA L QLEP +++ +V + N+Y G + RK+MK + V+
Sbjct: 798 ACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVK 857
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K G SW+ +++ VH F +G K HP + I+KKL+EL +++ GYVP+T AL+D+E+E
Sbjct: 858 KEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQE 917
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
+KEE L +HSEKLA+ F + Q S IRIMKN+R+C DCH+ K S + G++I+
Sbjct: 918 NKEEILSYHSEKLAVAFVLAAQRS---STLPIRIMKNLRVCGDCHSAFKYISKIEGRQII 974
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
+RDSNRFHHF+D CSC+D+W
Sbjct: 975 LRDSNRFHHFQDGACSCSDFW 995
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 190/379 (50%), Gaps = 40/379 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+++ N+LIN Y + G AR +FDEMP RN VSW ++SGY+++G +E +
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 100 L-QYFFPNEFSLASVLISCD------YLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+ + F N+++ SVL +C L G+ +H L K S V+N LI+MY K
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 153 ADEAWKV--FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ + F ++E +N +SWNS+I+ ++++ ++ A +F +Q +
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIIS-------------VYSQAGDQRSAFRIFSSMQYD 200
Query: 211 GMAPDWCTF-SIVLKACAGLVTE---RHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
G P TF S+V AC+ +TE R + I K G D + + L+ A+A+ GS
Sbjct: 201 GSRPTEYTFGSLVTTACS--LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLS 322
+S +++VF++M + V+ N ++ +EA +LF +MN V P+S +V LLS
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES--YVILLS 316
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-----MVDLLGRVGRILEAEKLIREMP 377
+ L +E + H + L + +V++ + G I +A ++ M
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 378 MEPDSVIWSVLLGSCRKHG 396
+ DSV W+ ++ ++G
Sbjct: 377 -DKDSVSWNSMITGLDQNG 394
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 169/369 (45%), Gaps = 39/369 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
DLFV + L++ +AK G L AR +F++M RN V+ L+ G + EE +LF +
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 100 ------------LQYFFPNEFSLASVLISCDYLHGKLVHALALKFSL-DAHVYVANALIN 146
L FP E+SLA G+ VH + L D V + N L+N
Sbjct: 302 SMIDVSPESYVILLSSFP-EYSLAE---EVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 147 MYSK--SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
MY+K S AD A +VF M ++ +SWNSMI +A+E + M+
Sbjct: 358 MYAKCGSIAD-ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR--------- 407
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
R + P T L +CA L + +H K G + + ++NAL+ YA
Sbjct: 408 ----RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA-KEALQLFSN---MNVQPDSATFVSL 320
G ++ +++F M HD VSWNSI+ A A ++ EA+ F N + + TF S+
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
LSA S + G ++ H + + + + ++ G+ G + EK+ M
Sbjct: 524 LSAVSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 381 DSVIWSVLL 389
D+V W+ ++
Sbjct: 583 DNVTWNSMI 591
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 34/298 (11%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRAC 181
+ H+ K LD VY+ N LIN Y ++ A KVF+ M RN +SW +++
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSG---- 76
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVH 239
+++ +EAL R + +EG+ + F VL+AC G V +H
Sbjct: 77 ---------YSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Query: 240 SLIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
L+ K + D V++N LI Y +C GS+ + F + + VSWNSI+ Y+ G
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 299 KEALQLFSNM---NVQPDSATFVSLL-SACSHAGLVQEGNKVFHSML---ENHGVVPQLD 351
+ A ++FS+M +P TF SL+ +ACS L + ++ ++ + G++ L
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR-KHGETRLAELAATKL 408
+ +V + G + A K+ +M + +++G R K GE ATKL
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE------ATKL 296
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+YAT+ A A +++ M++H + D+ V + L++MY+K G LD A F+
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVR--ACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF--CSLLQYFFPNEFSLASVLISCDYLHGKL 124
MP RN SW ++ISGYA+HG EE +LF L P+ + VL +C H L
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS--HAGL 736
Query: 125 V-------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMI 175
+ +++ + L + + + ++ ++ D+ E M + NV+ W +++
Sbjct: 737 LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Query: 176 AAFRACKLEAQAIELFAK 193
A C+ + EL K
Sbjct: 797 GA--CCRANGRKAELGKK 812
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/586 (37%), Positives = 332/586 (56%), Gaps = 28/586 (4%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
ACA Q+H + F P D FV+ ++MY K G L AR LF+EMP RNV
Sbjct: 122 ACAPPRCSTVGPQIHALALR-FGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNV 180
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCD---YLH-GKLVHAL 128
++W A+++ G E F+ + L + PN S+ + +C +L G+ H
Sbjct: 181 IAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGF 240
Query: 129 ALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
+ D V V+NA+++ Y K CA +A VF+ M RN +SW SMI A+
Sbjct: 241 VVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAY--------- 291
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
A+ EE+AL ++ + G P S VL CAGL+ A+H++ +
Sbjct: 292 ----AQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCI 347
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ + +A+AL+ Y +CG + ++QVF M +LV+WN+++ YA G A+ AL +F
Sbjct: 348 DANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDA 407
Query: 308 M----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M P+ T V++++ACS GL ++G ++F +M E GV P+ +HYAC+VDLLGR
Sbjct: 408 MIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRA 467
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
G A ++I+ MPM P +W LLG+C+ HG+T L +A+ KL +L+P DS V +S
Sbjct: 468 GMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLS 527
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
N+ +G + +A +RKEMK ++K PG SWI +N VH F + +H + I L
Sbjct: 528 NMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLA 587
Query: 484 ELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIM 543
+L Q++ GY+P+T +L+D+EEE KE +++ HSEKLAL F +++ IRI
Sbjct: 588 KLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIH----IPPSVPIRIT 643
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+RICVDCH K S ++G+EI+VRD+NRFH+FK CSC DYW
Sbjct: 644 KNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 192/414 (46%), Gaps = 34/414 (8%)
Query: 36 PNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL 95
P P F+ HL+N+Y+K A P VVS+TA ISG AQH
Sbjct: 41 PGLPP--FICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSA 98
Query: 96 FCSLLQ-------YFFPNEFSLASVLISCDYLHGKLVHALALKFS-LDAHVYVANALINM 147
F ++L+ + FP+ F A+ G +HALAL+F L +V+ A ++M
Sbjct: 99 FAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDM 158
Query: 148 YSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
Y K+ C A ++FE M RNVI+WN+++ ++ + +E F +A F R+
Sbjct: 159 YFKTGCLGLARRLFEEMPNRNVIAWNAVMT---NAVIDGRPLETF-------KAYFGLRE 208
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
G P+ + ACAG + H + GF+ D ++NA++ Y +C
Sbjct: 209 ---AGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRC 265
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSA 323
++ VFD M + VSW S++ AYA HG ++AL ++ N +P S+L+
Sbjct: 266 AGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTT 325
Query: 324 CSHAGLVQEG-NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
C AGL+ + H++ + + + +VD+ G+ G + +AE++ +MP E +
Sbjct: 326 C--AGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMP-ERNL 382
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY--CLSGSFNK 434
V W+ ++G G+ + A LA G S + + N+ C G K
Sbjct: 383 VTWNAMIGGYAHIGDAQNA-LAVFDAMIRSGGTSPNHITLVNVITACSRGGLTK 435
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 327/567 (57%), Gaps = 35/567 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS- 98
+D + L+ YA+ L AR FD + +VVSW A+ + Y QH + E LF
Sbjct: 387 RDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERM 446
Query: 99 LLQYFFPNEFSLASVLISCDYLH-------GKLVHALALKFSLDAHVYVANALINMYSK- 150
LL+ P+ + + L +C GK + +L + L+ VANA +NMY+K
Sbjct: 447 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 506
Query: 151 -SCADEAWKVFENME--FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
S AD A VFE + R+ I+WNSM+AA+ L +A ELF M+ E+
Sbjct: 507 GSLAD-ARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKL-------- 557
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ P+ TF VL A + +H+ + GFE DTVI NAL++ YA+CGS+
Sbjct: 558 ----VKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSL 613
Query: 268 SLSKQVFDKMTYH--DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
++ +FDK + + D+++W S++ YA +GQA+ AL+LF M V+P+ TF+S L+
Sbjct: 614 DDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALT 673
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC+H G +++G ++ M +HG++P H++C+VDLLGR GR+ EAEKL+ E + D
Sbjct: 674 ACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADV 732
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ W LL +C+ E E A ++ QL+P + ++ ++++Y +G +N+A IRK M
Sbjct: 733 ITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTM 792
Query: 443 KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL 502
+R PG S +E+ +H F++G K HP+ E I+ +LE L +K GYV +T L L
Sbjct: 793 LDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVL 852
Query: 503 HDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDL 562
HD+ +EHKE L HSEKLA+ F +M+ S S +R++KN+R+C DCH KL S +
Sbjct: 853 HDVSQEHKERLLMRHSEKLAIAFGLMSTPS----GSPLRVIKNLRVCSDCHTATKLISKV 908
Query: 563 LGKEIVVRDSNRFHHFKDRICSCNDYW 589
G++I++RDS+R+HHF CSC DYW
Sbjct: 909 TGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 196/414 (47%), Gaps = 48/414 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP- 69
L +AC+ GN+ ++H + + + ++ + N LI+MY+K G L DA+ FD +P
Sbjct: 147 LVNACSCLGNLAAGRRIHSQISDR--DFEENSVLGNALISMYSKCGSLIDAKQAFDRLPR 204
Query: 70 --KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP--NEFSLASVLISC-------- 117
KR+VV+W A+IS + ++G+A E +LF + + P N + SVL SC
Sbjct: 205 ASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSL 264
Query: 118 ---DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF----ENMEFRNVI 169
+HG++V A ++ +V AL++ Y K D+AW+VF + +++
Sbjct: 265 EDVRAIHGRIVGA-----GIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLV 319
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
+ ++MI+A C +E+L LF + EG P T VL AC+ L
Sbjct: 320 TCSAMISA---CWQNGW----------PQESLRLFFAMNLEGTKPSGVTLVSVLNACSML 366
Query: 230 -VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
V A + + D V+ L+ YAR + ++ FD + D+VSWN++
Sbjct: 367 QVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAM 426
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS--HAGLVQEGNKVFHSMLEN 343
AY H +++EAL LF M V+P ATF++ L+AC+ K S+LE
Sbjct: 427 AAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEE 486
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLI-REMPMEPDSVIWSVLLGSCRKHG 396
G+ +++ + G + +A + R P D + W+ +L + HG
Sbjct: 487 AGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHG 540
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 197/418 (47%), Gaps = 40/418 (9%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ Y L AC +KQ +LH H+++ + F+ + LI M+AK G L +A
Sbjct: 42 APSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEA 101
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-- 121
L D +V S TA+I + +HG ++ LF + PN +L +++ +C L
Sbjct: 102 LADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRM--EVRPNCHALIALVNACSCLGNL 157
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSC----ADEAWKVFENMEFRNVISWNSMI 175
G+ +H+ + + + NALI+MYSK A +A+ R+V++WN+MI
Sbjct: 158 AAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMI 217
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM-APDWCTFSIVLKAC--AGLVTE 232
+A F + + EAL LFR + R+G P+ TF VL +C AGL++
Sbjct: 218 SA-------------FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSL 264
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF----DKMTYHDLVSWNSI 288
A+H I G E + + AL+ +Y + GS+ + +VF D+ LV+ +++
Sbjct: 265 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAM 324
Query: 289 LKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ A +G +E+L+LF MN++ P T VS+L+ACS ++Q G+ + +
Sbjct: 325 ISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS---MLQVGSATAFVLEQAME 381
Query: 346 VVPQLDHYACMVDLLGRVGRI--LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
VV LL R L + + PD V W+ + + +H +R A
Sbjct: 382 VVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREA 439
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 18/186 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + A +I Q ++H +++N D + N L+NMYAK G LDDA+ +FD+
Sbjct: 565 FVAVLDASTSRTSIAQGREIHARVVSN--GFESDTVIQNALLNMYAKCGSLDDAQAIFDK 622
Query: 68 MP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKL 124
+ +V++WT+LI+GYAQ+G AE +LF ++ Q PN + S L +C++ GKL
Sbjct: 623 SSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNH-GGKL 681
Query: 125 VHALAL--KFSLDAHVYVA----NALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
L + D + A + ++++ + C DEA K+ E +VI+W +A
Sbjct: 682 EQGCELLSGMTPDHGILPASKHFSCIVDLLGR-CGRLDEAEKLLERTSQADVITW---MA 737
Query: 177 AFRACK 182
ACK
Sbjct: 738 LLDACK 743
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 335/601 (55%), Gaps = 32/601 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ + Y +L A A + A +H + + P D F++ LI YA L AR
Sbjct: 247 TQRTYESLLLAAARARDTALAAAVHRRLEAD-PVFRSDPFLSTRLIEAYAALSALPAARQ 305
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----- 117
+FDE P +N+ W A++ A + EE + + P + +S A L +C
Sbjct: 306 VFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASA 365
Query: 118 DYLHG----KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWN 172
+L + +HA A++ H +VA LI+ Y+K A +VF +M RN++SW+
Sbjct: 366 SHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWS 425
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+MI + + AI++F +M + L P+ T VL ACAG+
Sbjct: 426 AMIGCYAKNERPGDAIQIFQEMMASDADLV-----------PNSITIVSVLHACAGVNAL 474
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKA 291
+H+ I + GF+ + NAL+ Y +CG + + +F+ + ++VSWNS++
Sbjct: 475 GQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISG 534
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
Y +HG +E+LQ+F M + P+ TFVS+L ACSH GLV++G K+F SM+E + V P
Sbjct: 535 YGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVE-YNVTP 593
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
+ +HYACMVDLLGR GR+ EA +LI+ M ++P +W LLG+CR HG AE+A + L
Sbjct: 594 RAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHL 653
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
LEP ++ +V +++IY + N+ ++++ ++ + K PG SWIE++ +++ F S
Sbjct: 654 FDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSV 713
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
++PQ E + + E + Q+K GYVP+T L+DIEEE KE L HSEKLA+ F ++
Sbjct: 714 DNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLI 773
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
GS IRI KN+R+C DCH+ K S +EIVVRD NRFHHF++ +CSC DY
Sbjct: 774 KTGS----GEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDY 829
Query: 589 W 589
W
Sbjct: 830 W 830
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/592 (35%), Positives = 333/592 (56%), Gaps = 35/592 (5%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
QLH H++ N P + + ++ A A+ +F + V W + +A+
Sbjct: 33 QLHAHLLKT--NSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAE 90
Query: 86 HGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYV 140
+ + LF L ++ P+ ++ + VL +C D +GK+VH K L +++++
Sbjct: 91 GDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFL 150
Query: 141 ANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK--- 195
N ++++Y+ C + A KVF+ M R+VI+WN MIA A +LFA+M
Sbjct: 151 QNMIVHLYAL-CGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERN 209
Query: 196 ---------------NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+EA+ LF +++ G+ P+ T VL ACA + +H
Sbjct: 210 VRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHD 269
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ G+E + + N LI Y +CG + + ++FD M +VSW++++ A HG+A++
Sbjct: 270 FSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAED 329
Query: 301 ALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL LF+ N V+P++ TF+ +L ACSH G+V++G K F SM ++G+VP+++HY CMV
Sbjct: 330 ALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMV 389
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DL R G + EA + I MP+ P+ V+W LLG C+ H +LAE A L +L+P +
Sbjct: 390 DLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDG 449
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SNIY +G + +RK M+ V+K PG S I +E V+ F +G HPQ E
Sbjct: 450 YYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEE 509
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
IF+ E+L+ ++K GYVP TS+ L D+EE+ KE+ LY HSEKLA+VF ++
Sbjct: 510 IFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKT----TPG 565
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+VIRIMKN+R+C DCH +K+ S + +EIVVRD NRFH FK+ CSC DYW
Sbjct: 566 TVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 343/592 (57%), Gaps = 31/592 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A L AC G K M H +++ D+FV L++MY+ G A +FD M
Sbjct: 250 ANLLKACGQSGLKKVGMCAHSYVLA--LGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSM 307
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGK 123
R+++SW A+ISGY Q+G E + LF L+Q + +L S++ C D +G+
Sbjct: 308 CSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGR 367
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACK 182
++H+ ++ L++H+ ++ A+++MYSK A +A VF M +NVI+W +M+
Sbjct: 368 ILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGL---- 423
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
++ E+AL LF Q+Q E +A + T ++ CA L + VH+
Sbjct: 424 ---------SQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHF 474
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH--DLVSWNSILKAYALHGQAKE 300
++G+ D VI +ALI YA+CG I ++++F+ +H D++ NS++ Y +HG +
Sbjct: 475 IRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNN-EFHLKDVILCNSMIMGYGMHGHGRY 533
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL ++S M ++P+ TFVSLL+ACSH+GLV+EG +FHSM +H V PQ HYAC+V
Sbjct: 534 ALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLV 593
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DL R GR+ EA++L+++MP +P + + LL CR H T + A +L L+ +S
Sbjct: 594 DLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSG 653
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SNIY + + IR M+ ++K PG S IE+ N+V+ F + HP
Sbjct: 654 IYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWAD 713
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++ LE L +++ GY+P+TS L D+ E K + L+ HSE+LA+ F +++
Sbjct: 714 IYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPC----G 769
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S+I+I KN+R+CVDCHN K S ++ +EI+VRD+NRFHHF + CSCND+W
Sbjct: 770 SLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 200/452 (44%), Gaps = 37/452 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F + ++++L H + +H +I N+ + F+ LI +Y+ G+L
Sbjct: 42 FNQAPSVFSSLLHQ--FSNTLIHVKSIHAQIIKNWVSTES--FLAAKLIRVYSDLGFLGH 97
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-----CSLLQYFFPNEFSLASVLI 115
AR++FD+ A+I+G+ ++ E RLF C + + F+L +
Sbjct: 98 ARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTD 157
Query: 116 SCDYLHGKLVHALALKFSLDAHVYVANALIN-MYSKSCADEAWKVFENMEFRNVISWNSM 174
D G + A++ H+YV ++++N + + +A KVF+ M ++V+ WNS+
Sbjct: 158 LLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSI 217
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I + L ++I++F +M G+ P T + +LKAC ++
Sbjct: 218 IGGYVQKGLFWESIQMFLEMIGG-------------GLRPSPVTMANLLKACGQSGLKKV 264
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
HS + G +D + +L+ Y+ G + VFD M L+SWN+++ Y
Sbjct: 265 GMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQ 324
Query: 295 HGQAKEALQLFSNMNVQP----DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G E+ LF + VQ DS T VSL+ CS ++ G ++ HS + + L
Sbjct: 325 NGMIPESYALFRRL-VQSGSGFDSGTLVSLIRGCSQTSDLENG-RILHSCIIRKELESHL 382
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+VD+ + G I +A + M + + + W+ +L ++G AE A Q
Sbjct: 383 VLSTAIVDMYSKCGAIKQATIVFGRMG-KKNVITWTAMLVGLSQNG---YAEDALKLFCQ 438
Query: 411 LE----PGDSLGFVQMSNIYCLSGSFNKARLI 438
++ +S+ V + + GS K R +
Sbjct: 439 MQEEKVAANSVTLVSLVHCCAHLGSLTKGRTV 470
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/639 (35%), Positives = 334/639 (52%), Gaps = 77/639 (12%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA + Q ++H + I N D FV N LI+ YAK G + DA ++F+ M
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRN--GTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL----------------------------LQY 102
++VVSW A+++GY Q G F LF ++ L
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382
Query: 103 FF--------PNEFSLASVLISCDYL----HGKLVHALALKFSL------------DAHV 138
F PN ++ S+L +C L G HA +LK L +
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDL 442
Query: 139 YVANALINMYSKSCADEAWKVFEN---MEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
V NALI+MYSK + +A + N RNV++W MI + A++LF++M
Sbjct: 443 VVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMI 502
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV--I 253
++ A+ AP+ T S +L ACA L + R +H+ + ++ + +V +
Sbjct: 503 SKPYAV-----------APNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFV 551
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
AN LI Y++CG + ++ VFD M + VSW S++ Y +HG+ KEAL +F M
Sbjct: 552 ANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGF 611
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
PD +F+ LL ACSH+G+V +G F M ++GV+ HYAC++DLL R GR+ +A
Sbjct: 612 VPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAW 671
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
K I+EMPMEP + IW LL +CR H LAE A KL ++ + + +SNIY +
Sbjct: 672 KTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATAR 731
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ IR+ MK S ++K PG SW++ + F G + HP I+ LE LIG++K
Sbjct: 732 RWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK 791
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
MGYVPET+ ALHD+++E K L HSEKLAL + ++ C IRI KN+R+C
Sbjct: 792 VMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCP----IRITKNLRVCG 847
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH+ S ++ EI+VRDS+RFHHFK+ CSC YW
Sbjct: 848 DCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 198/419 (47%), Gaps = 58/419 (13%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKR---NVVSWTALISGYAQHGNAEECFRLF 96
++FV N L+ MY++ G L+DA +FDE+ ++ +V+SW ++++ + + N LF
Sbjct: 182 SNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLF 241
Query: 97 ---CSLLQYFFPNE----FSLASVLISCDYLHG----KLVHALALKFSLDAHVYVANALI 145
+++ NE S+ ++L +C L K +H+ A++ A +V NALI
Sbjct: 242 SEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALI 301
Query: 146 NMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------- 197
+ Y+K +A VF MEF++V+SWN+M+ + A ELF M+ E
Sbjct: 302 DTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVI 361
Query: 198 ---------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT-----ERHASA 237
+EAL F+Q+ G P+ T +L ACA L E HA +
Sbjct: 362 TWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYS 421
Query: 238 VHSLIAKYGFEDDT-------VIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSI 288
+ + + V+ NALI Y++C S ++ +F+ + ++V+W +
Sbjct: 422 LKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVM 481
Query: 289 LKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
+ YA +G + +AL+LFS M V P++ T +L AC+H ++ G ++ + +
Sbjct: 482 IGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRH 541
Query: 344 HGVVPQLDHYA-CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
H + A C++D+ + G + A + MP + V W+ ++ HG + A
Sbjct: 542 HEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMHGRGKEA 599
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 195/468 (41%), Gaps = 87/468 (18%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-------------NFPNEPQDLFVT-----NHLI 49
+A+L C ++ Q+H+ +I + P P +V+ ++
Sbjct: 34 FASLLKECR---SVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVV 90
Query: 50 NMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEF 108
Y G DA + + + V W L+ + + G + + C +L+ P+ F
Sbjct: 91 ASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHF 150
Query: 109 SLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENM 163
+L L +C Y G H L +++V+V NAL+ MYS+S + ++A VF+ +
Sbjct: 151 TLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEI 210
Query: 164 EFR---NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+ +VISWNS++AA A++LF++M + + E D +
Sbjct: 211 TRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTT-----IVHEKATNE--RSDIISIV 263
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+L ACA L +HS + G D + NALI YA+CGS+ + VF+ M +
Sbjct: 264 NILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK 323
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM-------------------------------- 308
D+VSWN+++ Y G+ A +LF NM
Sbjct: 324 DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTF 383
Query: 309 ------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN-----------HGVVPQLD 351
+P+S T +SLLSAC+ G + +G + L+ G L
Sbjct: 384 QQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLV 443
Query: 352 HYACMVDLLGRVGRILEAEKLIREMP-MEPDSVIWSVLLGSCRKHGET 398
+ ++D+ + A + +P E + V W+V++G ++G++
Sbjct: 444 VHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDS 491
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 29/208 (13%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYG--------------------FEDDTVIANALI 258
F+ +LK C + T R +H I YG + + ++
Sbjct: 34 FASLLKECRSVNTVRQ---IHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVV 90
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
+Y CG+ S + V +++ V WN +++A+ G+ A+ + M +PD
Sbjct: 91 ASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHF 150
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T L AC + G+ FH ++ +G + +V + R G + +A + E
Sbjct: 151 TLPYALKACGELPSYRSGS-AFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDE 209
Query: 376 MPME--PDSVIWSVLLGSCRKHGETRLA 401
+ + D + W+ ++ + K R A
Sbjct: 210 ITRKGIDDVISWNSIVAAHVKGSNPRTA 237
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/591 (35%), Positives = 336/591 (56%), Gaps = 28/591 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T A++ CA ++ + +H H++ + + D+FV+N LINMY+KFG L DA+ +
Sbjct: 222 TITVASILPVCAQSDDVINGVLIHLHVLKHGLDS--DVFVSNALINMYSKFGRLQDAQMV 279
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGK 123
FD+M R++VSW ++I+ Y Q+ + R F + L P+ ++ S+ L +
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQ 339
Query: 124 LVHALALKFS-----LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
+ L F LD V + NAL+NMY+K + A VF+ + ++ ISWN+++
Sbjct: 340 RISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTG 399
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L ++AI+ + M+ + + P+ T+ ++ A + + +
Sbjct: 400 YTQNGLASEAIDAYNMMEECRDTI------------PNQGTWVSIIPAYSHVGALQQGMK 447
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+ + K D +A LI Y +CG + + +F ++ V WN+I+ + +HG+
Sbjct: 448 IHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGR 507
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+EALQLF +M V+ D TFVSLLSACSH+GLV EG K F M + +G+ P L HY
Sbjct: 508 GEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYG 567
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLLGR G + +A +L+R MP++PD+ IW LL +C+ +G L LA+ +L +++
Sbjct: 568 CMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSE 627
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ +V +SNIY + + +R + +RK PG S + + ++ F +G + HP+
Sbjct: 628 NVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPK 687
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I+K+L+ L ++K +GYVP+ S DIEE+ KE+ L HSE+LA+ F I++
Sbjct: 688 YTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIIST---- 743
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
RS IRI KN+R+C DCHN K S + +EIVVRDSNRFHHFKD ICSC
Sbjct: 744 PPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSC 794
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 218/397 (54%), Gaps = 31/397 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV L+++Y+++G LD A +F +MP ++V SW A+ISG+ Q+GNA + +
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213
Query: 100 L-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ + ++AS+L C D ++G L+H LK LD+ V+V+NALINMYSK
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRL 273
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A VF+ ME R+++SWNS+IAA+ + + AL F+ +Q G+
Sbjct: 274 QDAQMVFDQMEVRDLVSWNSIIAAYE-------------QNNDPSTALRFFKGMQLGGIR 320
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED-DTVIANALIHAYARCGSISLSKQ 272
PD T + + L +R + ++ + + + D D VI NAL++ YA+ G ++ +
Sbjct: 321 PDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHT 380
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAG 328
VFD++ D +SWN+++ Y +G A EA+ ++ M + P+ T+VS++ A SH G
Sbjct: 381 VFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVG 440
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+Q+G K+ +++N LD + C++DL G+ GR+ +A L E+P + SV W+
Sbjct: 441 ALQQGMKIHAKLIKNS---LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVPWN 496
Query: 387 VLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQM 422
++ S HG A +L L + D + FV +
Sbjct: 497 AIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSL 533
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 197/405 (48%), Gaps = 29/405 (7%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
LH + LF++C N+ +LH ++ + Q++ ++ LIN+Y G + +
Sbjct: 19 LHKDADFNALFNSCV---NVNATKKLHALLL--VFGKSQNIVLSTKLINLYVTHGDISLS 73
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-----YFFPNEFSLASVLIS 116
R FD + K+N+ SW ++IS Y + G E L + P+ ++ +L +
Sbjct: 74 RSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKA 133
Query: 117 C-DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
C + GK VH K + V+VA +L+++YS+ D A KVF +M ++V SWN+M
Sbjct: 134 CVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAM 193
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ F + N AL + +++ EG+ D T + +L CA +
Sbjct: 194 ISG-------------FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H + K+G + D ++NALI+ Y++ G + ++ VFD+M DLVSWNSI+ AY
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+ AL+ F M ++PD T VSL S S + + ++ + +
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+V++ ++G + A + ++P + D++ W+ L+ ++G
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVTGYTQNG 404
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 155/310 (50%), Gaps = 21/310 (6%)
Query: 123 KLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +HAL L F ++ ++ LIN+Y + + F+ + +N+ SWNS+I+A+
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+A+ + LF + PD+ TF +LKAC LV + VH
Sbjct: 99 GKYHEAMNCVNQ---------LFSMCGGGHLRPDFYTFPPILKACVSLVDGKK---VHCC 146
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GFEDD +A +L+H Y+R G + ++ +VF M D+ SWN+++ + +G A A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L + + M V+ D+ T S+L C+ + V G + H + HG+ + +++
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVING-VLIHLHVLKHGLDSDVFVSNALIN 265
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE--TRLAELAATKLKQLEPGDS 416
+ + GR+ +A+ + +M + D V W+ ++ + ++ + T L +L + P D
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP-DL 323
Query: 417 LGFVQMSNIY 426
L V +++I+
Sbjct: 324 LTVVSLTSIF 333
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/575 (38%), Positives = 322/575 (56%), Gaps = 30/575 (5%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
QLH + F P D FV+ ++MY K G L AR LFDEMP RNVV+W A+++
Sbjct: 141 QLHALALR-FGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVL 199
Query: 86 HGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYV 140
G E + L PN S+ + +C + G+ + K V V
Sbjct: 200 DGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSV 259
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
+N++++ Y K C +A VF+ M RN +SW SM+ A+ A+ EEE
Sbjct: 260 SNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAY-------------AQNGAEEE 306
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A F++ +R G P S VL CAGL+ A+H++ + + + +A+AL+
Sbjct: 307 AFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVD 366
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSA 315
Y +CG I ++QVF +M +LV+WN+++ YA G A AL +F M P+
Sbjct: 367 MYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYI 426
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T V++L+ACS GL +EG ++F +M G+ P+++HYAC+VDLL R G A K+I+
Sbjct: 427 TLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQG 486
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MPM P +W LLG C+ HG+T L +AA KL +L+P DS V +SN+ +G + +A
Sbjct: 487 MPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEA 546
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
+RKEMK ++K PG SWI +N VH F + H I L +L GQ++ GY+
Sbjct: 547 TDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYM 606
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHN 554
P+T AL+D+EEE KE +++ HSEKLAL F G +C + IRIMKN+RICVDCH
Sbjct: 607 PDTQYALYDLEEEEKESEVFQHSEKLALAF-----GLICIPPGIPIRIMKNLRICVDCHR 661
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S + G+EI+VRD+N FHHFK+ CSC DYW
Sbjct: 662 AFKFISGIAGREIIVRDNNMFHHFKNYECSCKDYW 696
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 175/361 (48%), Gaps = 28/361 (7%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
F+ HL+N+Y+K A P VVS+TA ISG AQH + F ++L+
Sbjct: 54 FLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRL 113
Query: 103 FF-PNEFSLASVL-----ISCDYLHGKLVHALALKFS-LDAHVYVANALINMYSKS-CAD 154
PN+F+ S G +HALAL+F L +V+ A ++MY K+ C
Sbjct: 114 GLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLA 173
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A ++F+ M RNV++WN+++ L+ + +E EA F L+ G P
Sbjct: 174 LARRLFDEMPNRNVVAWNAVMT---NAVLDGRPLETV-------EAYF---GLRGAGGMP 220
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ + ACAG+ + +AK GF D ++N+++ Y +C + ++ VF
Sbjct: 221 NVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVF 280
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQ 331
D M + VSW S++ AYA +G +EA ++ +P S+L+ C AGL+
Sbjct: 281 DGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTC--AGLLG 338
Query: 332 -EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ + H++ + + + +VD+ G+ G I +AE++ EMP + + V W+ ++G
Sbjct: 339 LDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMP-QRNLVTWNAMIG 397
Query: 391 S 391
Sbjct: 398 G 398
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/622 (34%), Positives = 331/622 (53%), Gaps = 64/622 (10%)
Query: 10 TLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
T+ + +G++ Q+H +I F + L V + L++MY+K G + DA+ +F +
Sbjct: 141 TMLKLSSSNGHVSLGKQIHGQVIKLGFESY---LLVGSPLLDMYSKVGCISDAKKVFYGL 197
Query: 69 PKRNVV------------------------------SWTALISGYAQHG---NAEECFRL 95
RN V SW+A+I G AQ+G A ECFR
Sbjct: 198 DDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFRE 257
Query: 96 FCSLLQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK- 150
++ +++ SVL +C L G+ +HA ++ +L H+YV +ALI+MY K
Sbjct: 258 M--KIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKC 315
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
C A VF+ M+ +NV+SW +M+ + +A+++F M QR
Sbjct: 316 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDM-------------QRS 362
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ PD T + ACA + + S H G ++N+L+ Y +CG I S
Sbjct: 363 GIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDS 422
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
++F++M D VSW +++ AYA G+A EA+QLF M ++PD T ++SACS A
Sbjct: 423 TRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRA 482
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV++G + F M+ +G+VP HY+CM+DL R GRI EA I MP PD++ W+
Sbjct: 483 GLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTT 542
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL +CR G + + AA L +L+P G+ +S+IY G ++ +R+ MK V
Sbjct: 543 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNV 602
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
RK PG SWI+ + ++H F++ + P + I+ KLEEL ++ GY P+TS HD+EE
Sbjct: 603 RKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEE 662
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
K + L HSE+LA+ F ++ IR+ KN+R+CVDCHN K S + G+EI
Sbjct: 663 AVKIKMLNCHSERLAIAFGLI----FVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREI 718
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
+VRD+ RFH FKD CSC D+W
Sbjct: 719 LVRDAVRFHRFKDGTCSCGDFW 740
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 215/426 (50%), Gaps = 33/426 (7%)
Query: 17 LHGNIKQAMQLHEHMI---NNFPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMPKRN 72
LH NI A L I F PQ +LF N+L+ Y+K G+L + F+++P R+
Sbjct: 40 LHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRD 99
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN--EFSLASVL-ISCDYLH---GKLVH 126
V+W LI GY+ G + + ++++ F N +L ++L +S H GK +H
Sbjct: 100 GVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIH 159
Query: 127 ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+K ++++ V + L++MYSK C +A KVF ++ RN + +N+++ AC +
Sbjct: 160 GQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIE 219
Query: 186 QAIELFAKMKN-----------------EEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
A++LF M+ E+EA+ FR+++ EG+ D F VL AC G
Sbjct: 220 DALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGG 279
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
L +H+ I + +D + +ALI Y +C + +K VFD+M ++VSW ++
Sbjct: 280 LGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAM 339
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ Y G+A EA+++F +M + PD T +SAC++ ++EG++ FH G
Sbjct: 340 VVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQ-FHGKAITAG 398
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
++ + +V L G+ G I ++ +L EM + D V W+ ++ + + G A
Sbjct: 399 LIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DEVSWTAMVSAYAQFGRAVEAIQLF 457
Query: 406 TKLKQL 411
K+ QL
Sbjct: 458 DKMVQL 463
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 139/352 (39%), Gaps = 90/352 (25%)
Query: 119 YLHGKLVHALALKFS-----------LDAHVYVANALINMYSKSC-ADEAWKVFENMEFR 166
+LH +VHA AL S +++ N L+ YSKS E + FE + R
Sbjct: 39 FLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDR 98
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+ ++WN +I + L A++ + M + + L R T +LK
Sbjct: 99 DGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS-----NLTR-------VTLMTMLKLS 146
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF----DKMTY--- 279
+ +H + K GFE ++ + L+ Y++ G IS +K+VF D+ T
Sbjct: 147 SSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYN 206
Query: 280 -----------------------HDLVSWNSILKAYALHGQAKEALQLFSNMNVQP---D 313
D VSW++++K A +G KEA++ F M ++ D
Sbjct: 207 TLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMD 266
Query: 314 SATFVSLLSACSHAGLVQEGNK----VFHSMLENHGVVPQ--LD--------HYA----- 354
F S+L AC G + +G + + + L++H V +D HYA
Sbjct: 267 QYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFD 326
Query: 355 -----------CMVDLLGRVGRILEAEKLIREMP---MEPDSVIWSVLLGSC 392
MV G+ GR EA K+ +M ++PD + +C
Sbjct: 327 RMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISAC 378
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 43/270 (15%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+S +K C GL RH +H I + +T + N ++HAYA S +++VFD +
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+L SWN++L AY+ G E + F + + D T+ L+ S +GLV K ++
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDR-DGVTWNVLIEGYSLSGLVGAAVKAYN 124
Query: 339 SMLEN-----------------------------HGVVPQL--DHY----ACMVDLLGRV 363
+M+++ HG V +L + Y + ++D+ +V
Sbjct: 125 TMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKV 184
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
G I +A+K+ + + ++V+++ L+G G + E A + +E DS+ + M
Sbjct: 185 GCISDAKKVFYGLD-DRNTVMYNTLMGGLLACG---MIEDALQLFRGMEK-DSVSWSAMI 239
Query: 424 NIYCLSGSFNKARLIRKEMK--GSRVRKYP 451
+G +A +EMK G ++ +YP
Sbjct: 240 KGLAQNGMEKEAIECFREMKIEGLKMDQYP 269
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/544 (37%), Positives = 314/544 (57%), Gaps = 29/544 (5%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ----YFFPNEFSLASV 113
L AR LFD MP+R+ SW+A++S + +HG ++ +L+ NEF+ +S
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168
Query: 114 LISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNV 168
L + G+ +H ++ +DA V +AL +MY+K D+A VF+ M R+V
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SW +M+ + + + LF +M R G+ P+ T++ VL+ACA
Sbjct: 229 VSWTAMLDRYFDAGRDGEGFRLFVRM-------------MRSGILPNEFTYAGVLRACAE 275
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+E+ VH +AK D +AL+H Y++ G + + +VF M DLVSW ++
Sbjct: 276 FTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAM 335
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ YA +GQ EAL F + +PD TFV +LSAC+HAGLV +G +FHS+ + +G
Sbjct: 336 ISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYG 395
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ DHYAC++DLL R G AE +I MP++P+ +W+ LLG CR H RLA AA
Sbjct: 396 IEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAA 455
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
L ++EP + +V ++NIY G F++ +R+ M+ + K P SWIE+ RVH F
Sbjct: 456 EALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVF 515
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
G K HPQ E I+ L++L +++ GYV +T LHD+E+E K++ + +HSE+LA+ F
Sbjct: 516 LVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAF 575
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
I+ + S I++ KN+RIC DCH +KL S ++ +EI+VRDSNRFHHFK+ CSC
Sbjct: 576 GIIATP----KGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSC 631
Query: 586 NDYW 589
DYW
Sbjct: 632 RDYW 635
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 157/326 (48%), Gaps = 27/326 (8%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
+LH H++ + D V + L +MYAKFG LDDAR +FD MP R+VVSWTA++ Y
Sbjct: 183 ELHCHVVRRGID--ADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240
Query: 86 HGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYV 140
G E FRLF +++ PNEF+ A VL +C GK VH K +
Sbjct: 241 AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFA 300
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
+AL++MYSK A +VF M +++SW +MI+ +A+ +E
Sbjct: 301 GSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISG-------------YAQNGQPDE 347
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
AL F L G PD TF VL AC AGLV ++ HS+ KYG E +
Sbjct: 348 ALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLV-DKGLGIFHSIKDKYGIEHTADHYACV 406
Query: 258 IHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM-NVQPDS- 314
I +R G ++ + + M + W S+L +H + A + ++P++
Sbjct: 407 IDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENP 466
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSM 340
AT+V+L + + GL E + +M
Sbjct: 467 ATYVTLANIYASVGLFDEVENMRRTM 492
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/608 (36%), Positives = 351/608 (57%), Gaps = 41/608 (6%)
Query: 2 LHSTQIYATLF------HACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF 55
+ T++Y + F +CA G I QLH + D+ V+N L+ +Y +
Sbjct: 481 MRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLK--LGLDLDVSVSNALLALYGEC 538
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQ-HGNAEECFRLFCSLLQYFF-PNEFSLASV 113
GY+ + + F M + VSW +LI A + E F +++ + PN + ++
Sbjct: 539 GYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITI 598
Query: 114 L--ISCDYLH--GKLVHALALKFSLDAHVYVANALINMYSKSCADEAW--KVFENMEFR- 166
L +S LH GK +HAL LK ++ A + NAL+ Y K C D + +F M R
Sbjct: 599 LAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGK-CGDMGYCENIFSRMSDRQ 657
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+ +SWNSMI+ + +L +A+++ F+ ++ QR D TF+ VL AC
Sbjct: 658 DEVSWNSMISGYIHNELLPKAMDM---------VWFMMQKGQR----LDGFTFATVLSAC 704
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
A + T VH + E D VI +AL+ YA+CG I + + F+ M +L SWN
Sbjct: 705 ATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWN 764
Query: 287 SILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
S++ YA HG ++L LF+ M +Q PD TFV +LSACSHAGLV EG F SM E
Sbjct: 765 SMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEI 824
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC-RKHGE-TRLA 401
+G+ P+++H++CMVDLLGRVG + + E + +MP++P+ +IW +LG+C R +G T L
Sbjct: 825 YGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALG 884
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
AA L ++EP +++ ++ +SN+Y G ++ R M+ + V+K G SW+ +++
Sbjct: 885 RRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDG 944
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
VH F +G K HP+++ I++KL+EL G+++ GY+PET AL+D+E E KEE L +HSEK+
Sbjct: 945 VHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKI 1004
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
A+ F + + IRI+KN+R+C DCH+ K S ++ ++IV+RDSNRFHHF++
Sbjct: 1005 AVAFVLTRPSKM-----PIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENG 1059
Query: 582 ICSCNDYW 589
CSC D+W
Sbjct: 1060 KCSCGDFW 1067
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 196/386 (50%), Gaps = 31/386 (8%)
Query: 22 KQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
K A +LH + N F N DLF+ N LIN+YA+ G L R +FDEMP RN+VSW+ LI
Sbjct: 90 KDAEELHLQLFKNGFVN---DLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLI 146
Query: 81 SGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD------YLHGKLVHALALKFS 133
SGY ++ E LF ++ F PN ++ SV+ +C G +H L K
Sbjct: 147 SGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQ 206
Query: 134 LDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
V +N LI+MY + D A + F+++ RN++S NSMI+ + A ++F
Sbjct: 207 YVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIF 266
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA--SAVHSLIAKYGFED 249
+ M+ E + +G+ P+ TF ++ A L + + + K GF
Sbjct: 267 STMQKE---------VMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLH 317
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
D + +AL+ +A+ GSI +K +F KM+Y ++VS N ++ + +EA++LF M
Sbjct: 318 DLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK 377
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKV---FHSMLENHGVV-PQLDHYACMVDLLGRV 363
+V+ + +++ +L+A +++ G + H+ L G++ Q+ ++++ +
Sbjct: 378 DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC 437
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLL 389
G I +A + R M DSV W+ ++
Sbjct: 438 GAINDACVVFRLMD-NKDSVTWNSMI 462
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 166/363 (45%), Gaps = 28/363 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL+V + L++ +AK G + A+++F +M RNVVS LI G + EE LF +
Sbjct: 318 DLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK 377
Query: 101 QYFFPNEFSLASVLISCDYLH--------GKLVHALALKFSL-DAHVYVANALINMYSKS 151
N S +L + H G VHA ++ L +A + + N LINMY+K
Sbjct: 378 DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC 437
Query: 152 CA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A ++A VF M+ ++ ++WNSMI K +A++ F +M+ E
Sbjct: 438 GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTE------------ 485
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ P T L +CA L +H K G + D ++NAL+ Y CG +
Sbjct: 486 -LYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKEC 544
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHG----QAKEALQLFSNMNVQPDSATFVSLLSACSH 326
++ F M +D VSWNS++ A A +A E+ + P+ TF+++L+A S
Sbjct: 545 QKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSS 604
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
L + G ++ H+++ V ++ G+ G + E + M D V W+
Sbjct: 605 LSLHELGKQI-HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWN 663
Query: 387 VLL 389
++
Sbjct: 664 SMI 666
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 32/298 (10%)
Query: 116 SCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
SC + +H K +++ N LIN+Y++ KVF+ M RN++SW+ +
Sbjct: 86 SCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCL 145
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE 232
I+ + ++ +A ELF KM + +G P+ F V++AC G
Sbjct: 146 ISGYTRNRMPNEACELFRKMVS-------------DGFMPNHYAFGSVIRACQECGEYGL 192
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTYHDLVSWNSILKA 291
+ +H L++K + +D +N LI Y G + +++ FD + +LVS NS++
Sbjct: 193 KFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISV 252
Query: 292 YALHGQAKEALQLFSNM-------NVQPDSATFVSLLSA-CSHAGLVQEGNKVFHSML-- 341
Y G A A +FS M ++P+ TF SL+SA CS L G + +L
Sbjct: 253 YCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCS---LANSGLVLLEQLLTR 309
Query: 342 -ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR-KHGE 397
E G + L + +V + G I A+ + ++M + +++G R K GE
Sbjct: 310 VEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGE 367
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/593 (36%), Positives = 333/593 (56%), Gaps = 31/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +L CAL K LH ++ + DL++ L+NMYA G L AR LF+
Sbjct: 82 FPSLLKGCALLLEFKVGKVLHGQVVKYMLH--SDLYIETTLLNMYAACGDLKSARFLFER 139
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----G 122
M RN V WT++ISGY ++ E L+ + + F P+E ++A+++ +C L G
Sbjct: 140 MGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVG 199
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
+H+ + + + +AL+NMY+K C D A +VF+ + ++V +W+++I +
Sbjct: 200 MKLHSHIREMDMKICAVLGSALVNMYAK-CGDLKTARQVFDKLSDKDVYAWSALIFGY-- 256
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQR-EGMAPDWCTFSIVLKACAGLVTERHASAVH 239
K EAL LFR++ M P+ T V+ ACA L VH
Sbjct: 257 -----------VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVH 305
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I + + N+LI +++CG I +K++FD M+Y DL+SWNS++ +ALHG +
Sbjct: 306 DYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGR 365
Query: 300 EAL---QLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL +L ++QPD TF+ +L+ACSHAGLVQEG K+F+ + +GV + +HY CM
Sbjct: 366 EALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCM 425
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLL R G + EA + IR MP++PD IW +LG+CR + L E AA L +LEP +
Sbjct: 426 VDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTND 485
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ +SNIY +N+ + +R+ M ++K PG S + I+N H F +G HP+
Sbjct: 486 GVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIA 545
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I L ++ +LK GYV +TS L +I++ KEE + HSEKLAL + ++ R
Sbjct: 546 EISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGR- 604
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I I+KN+R+C DCH +KL S + ++I +RD NRFHHFKD CSC DYW
Sbjct: 605 ---IVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 29/243 (11%)
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A+ VF + +V++WNSM+ AF + +A++ + +M L+R PD
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEM------------LERSRNVPD 78
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
TF +LK CA L+ + +H + KY D I L++ YA CG + ++ +F+
Sbjct: 79 RFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFE 138
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+M + + V W S++ Y + EAL L+ M PD T +L+SAC+ +
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198
Query: 333 GNKVFHSMLENHGVVPQLDHYAC------MVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G K+ H + ++D C +V++ + G + A ++ ++ + D WS
Sbjct: 199 GMKL-------HSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS-DKDVYAWS 250
Query: 387 VLL 389
L+
Sbjct: 251 ALI 253
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 255 NALIHAYARCGSISL--SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---- 308
N LI GS+ + + VF D+++WNS+L+A+ + ALQ ++ M
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
NV PD TF SLL C+ + G KV H + + + L ++++ G +
Sbjct: 74 RNV-PDRFTFPSLLKGCALLLEFKVG-KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKH 395
A L M + V+W+ ++ K+
Sbjct: 132 SARFLFERMG-HRNKVVWTSMISGYMKN 158
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 322/582 (55%), Gaps = 46/582 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ G I ++H LFV N L++MY K G+L +AR + DE
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATK--VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE 200
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
M +R+VVSW +L+ GYAQ+ ++ + C ++ K+ H
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEV-CREMESV-------------------KISHD 240
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
SL V MY K +F M ++++SWN MI + + +A
Sbjct: 241 AGTMASLLPAVSNTTTENVMYVKD-------MFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+EL+++M + +G PD + + VL AC +H I +
Sbjct: 294 VELYSRM-------------EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL 340
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ ++ NALI YA+CG + ++ VF+ M D+VSW +++ AY G+ +A+ LFS
Sbjct: 341 IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 400
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
+ + PDS FV+ L+ACSHAGL++EG F M +++ + P+L+H ACMVDLLGR G
Sbjct: 401 LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
++ EA + I++M MEP+ +W LLG+CR H +T + LAA KL QL P S +V +SN
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
IY +G + + IR MK ++K PG S +E+ +H F G + HPQ + I+++L+
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE-RSVIRIM 543
L+ ++K +GYVP++ ALHD+EEE KE L HSEKLA+VFA+MN + + IRI
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
KN+RIC DCH KL S + +EI++RD+NRFH F+ +CSC
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 152/354 (42%), Gaps = 47/354 (13%)
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A KVF+ + RNVI N MI ++ + +++F M + PD
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGC-------------NVRPD 139
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
TF VLKAC+ T +H K G + N L+ Y +CG +S ++ V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+M+ D+VSWNS++ YA + + +AL++ M + D+ T SLL A S+ E
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTE 257
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP---MEPDSVIWSVLL 389
M G L + M+ + + +EA +L M EPD+V + +L
Sbjct: 258 NVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 390 GSCRKHGETRLAELAAT-----KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
+C G+T L + K+L P + L + ++Y G KAR + + MK
Sbjct: 317 PAC---GDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
V +SW + + + G R A+F KL++ G VP++
Sbjct: 373 RDV-----VSWTAM---ISAYGFSG-RGCDAVALFSKLQD-------SGLVPDS 410
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F++ K+ + +L K+ +E +FL Q VL + T R
Sbjct: 19 FQSRKVSSSLPKLELDQKSPQETVFLLGQ---------------VLDTYPDIRTLR---T 60
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VHS I ++ + L+ AYA ++ +++VFD++ +++ N ++++Y +G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
E +++F M NV+PD TF +L ACS +G + G K+ H G+ L
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI-HGSATKVGLSSTLFVGN 179
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+V + G+ G + EA ++ EM D V W+ L+
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLV 213
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 320/563 (56%), Gaps = 33/563 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
DLFV L++MYAK G + DA +FD M R+VV WTA+I+ Y Q + LF +
Sbjct: 165 SDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKM 224
Query: 100 LQY-FFPNEFSLASVLISCDYL-HGKL---VHALALKFSLDAHVYVANALINMYSK-SCA 153
+ F +E + SV + L G++ VH A+ V V N+++ MY+K
Sbjct: 225 QEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNV 284
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ A VF+ ME RN ISWNSM++ + + +AL LF Q+Q
Sbjct: 285 ERARLVFDRMEERNGISWNSMLSGY-------------TQNGRPTDALSLFNQMQASECD 331
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T I++ AC+ L ++ +H+ + + DT + NA++ Y +CG + + ++
Sbjct: 332 PNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEM 391
Query: 274 FD--KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
F+ ++ D+ SWN ++ Y +HG KEAL+LFS M V+P+ TF S+LSACSHAG
Sbjct: 392 FNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAG 451
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
L+ EG K F M + V P++ HYACMVD+LGR G + EA +LI+++P P +W L
Sbjct: 452 LIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGAL 510
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +CR HG T L E+AA L QLEP + +V MSNIY S + + ++R+ MK ++
Sbjct: 511 LLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLK 570
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K S IE VH F + + P +++K+E L ++K +GYVP+ S LHD+E E
Sbjct: 571 KPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPE 630
Query: 509 HKEEQLYHHSEKLALVFAI--MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
KE L +HSEKLA+ F I M+QG I++ KN+R+C DCH K S + G++
Sbjct: 631 DKEHLLNYHSEKLAVAFGIMKMDQG------MPIQVTKNLRVCSDCHWAFKFISSIYGRK 684
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+VRD NRFHHF+ CSC DYW
Sbjct: 685 IIVRDGNRFHHFQGGRCSCGDYW 707
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 197/422 (46%), Gaps = 37/422 (8%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKR--------NVVSWTALISGYAQHGNAEECFRLFCSL 99
LI +Y+K G L AR LFD N ++ YA G + E L+ +
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 100 LQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
+ N F+ VL C + G++VH ++ + ++V AL++MY+K C +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAK-CGE 182
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+A +VF+ M R+V+ W +MI L+ + + +AL LFR++Q EG
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMIT-------------LYEQAERPLKALMLFRKMQEEGF 229
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D T V A L R A +VH GF D + N+++ YA+CG++ ++
Sbjct: 230 LGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARL 289
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGL 329
VFD+M + +SWNS+L Y +G+ +AL LF+ M P+ T + ++SACS+ G
Sbjct: 290 VFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGS 349
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM-EPDSVIWSVL 388
G K+ + ++ + + A M D+ + G + A ++ + E D W+VL
Sbjct: 350 KHLGRKLHNFVISSKMDIDTTLRNAIM-DMYMKCGDLDTAVEMFNNCELGERDVSSWNVL 408
Query: 389 LG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
+ HG+ L + +++ +EP D + F + + +G ++ R +M
Sbjct: 409 ISGYGVHGHGKEALELFSRMQVEGVEPND-ITFTSILSACSHAGLIDEGRKCFADMTKLS 467
Query: 447 VR 448
VR
Sbjct: 468 VR 469
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 324/554 (58%), Gaps = 30/554 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PN 106
LI YA GY+++AR LFDE+ ++VVSW A+ISGY + N +E L+ +++ P+
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPD 196
Query: 107 EFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVF 160
E ++ +V+ +C G+ +H+ +++ + N LI++YSK C + A +F
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSK-CGEVETACGLF 255
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+ + ++VISWN++I M +EAL LF+++ R G +P+ T
Sbjct: 256 QGLAKKDVISWNTLIGGH-------------THMNLYKEALLLFQEMLRSGESPNDVTML 302
Query: 221 IVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
VL ACA L +H I K G + + + +LI YA+CG I +KQVFD M
Sbjct: 303 SVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSML 362
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
L SWN+++ +A+HG+A A LFS M + PD TFV LLSACSH+G++ G
Sbjct: 363 TRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRH 422
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+F SM +++ + P+L+HY CM+DLLG G EA+++IR MPMEPD VIW LL +C+ H
Sbjct: 423 IFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMH 482
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
L E A L ++EP + +V +SNIY +G +++ IR + ++K PG S
Sbjct: 483 NNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSS 542
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
IEI++ VHEF G K HP+ I++ LEE+ ++ G+VP+TS L ++EEE KE L
Sbjct: 543 IEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALR 602
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S + +EI+ RD R
Sbjct: 603 HHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRL 658
Query: 576 HHFKDRICSCNDYW 589
H KD + SC+DYW
Sbjct: 659 HLLKDGVWSCHDYW 672
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 196/419 (46%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F+ + + N++ W + G+A + ++ +L+ C + PN +S +
Sbjct: 12 FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71
Query: 114 LISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D +YV +LI+MY+++ ++A KVF+ R+V
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMK------------------NEEEALFLFRQLQRE 210
+S+ ++I + + A +LF ++ N +EAL L++ + +
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ ACA + +HS I +GF + I N LI Y++CG + +
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F + D++SWN+++ + KEAL LF M P+ T +S+L AC+H
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H + GV ++D+ + G I A+++ M S W
Sbjct: 312 GAIDIG-RWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS-W 369
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG+ A +K+++ ++P D + FV + + SG + R I + M
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGIDP-DDITFVGLLSACSHSGMLDLGRHIFRSM 427
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G I +H ++ + LI+MYAK G ++ A+ +FD M
Sbjct: 303 SVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSML 362
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
R++ SW A+I G+A HG A F LF + + P++ + +L +C +
Sbjct: 363 TRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSH 413
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/568 (36%), Positives = 331/568 (58%), Gaps = 37/568 (6%)
Query: 34 NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
N P+ + L T ++++ A Y A ++F + NV +W +I GYA+ N F
Sbjct: 49 NNPDMGKHLIFT--IVSLSAPMSY---AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAF 103
Query: 94 RLFCSLL-------QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALIN 146
+ ++ + +P F L ++ S + G+ +H++ ++ ++ V+V N+L++
Sbjct: 104 LFYRQMVVSCVEPDTHTYP--FLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLH 161
Query: 147 MYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
+Y+ +C D A+KVFE M+ R++++WNSMI F A EAL LF
Sbjct: 162 IYA-ACGDTESAYKVFELMKERDLVAWNSMINGF-------------ALNGRPNEALTLF 207
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
R++ EG+ PD T +L A A L VH + K G ++ + N+L+ YA+C
Sbjct: 208 REMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKC 267
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLL 321
G+I +++VF +M+ + VSW S++ A++G +EAL+LF M Q P TFV +L
Sbjct: 268 GAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVL 327
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
ACSH G++ EG + F M E G++P+++HY CMVDLL R G + +A + I+ MP++P+
Sbjct: 328 YACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 387
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
+VIW LLG+C HG L E+A + L LEP S +V +SN+Y ++ ++IR+
Sbjct: 388 AVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRS 447
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
M V+K PG S +E+ NRV+EF G + HPQ + ++ LE++ LK GYVP T+
Sbjct: 448 MLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANV 507
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
L DIEEE KE+ L +HSEK+A+ F ++N + IR+MKN+R+C DCH +KL +
Sbjct: 508 LADIEEEEKEQALSYHSEKVAIAFMLLNTPP----GTPIRVMKNLRVCADCHMAIKLIAK 563
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +EIV+RD +RFHHF+ CSC DYW
Sbjct: 564 IYDREIVIRDRSRFHHFRGGSCSCKDYW 591
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/603 (36%), Positives = 334/603 (55%), Gaps = 39/603 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD--ARHLFDEMPKRNVVSWT 77
N+ Q Q+H H++ + Q ++ LI K G D AR + + + RN WT
Sbjct: 61 NLNQIKQIHGHVLRKGLD--QSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWT 118
Query: 78 ALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKF 132
A+I GYA G +E ++ C + P F+ +++L +C + G+ HA +
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 133 SLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQA--- 187
VYV N +I+MY K D A KVF+ M R+VISW +IAA+ R +E A
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 188 --------------IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+ FA+ +EAL F ++++ G+ D T + + ACA L +
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 234 HASAVHSLIAKYGFE--DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+A + K G+ D VI +ALI Y++CG++ + VF M ++ +++S++
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 292 YALHGQAKEALQLF----SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
A HG+A+EAL LF + ++P++ TFV L ACSH+GLV +G +VF SM + GV
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
P DHY CMVDLLGR GR+ EA +LI+ M +EP +W LLG+CR H +AE+AA
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478
Query: 408 LKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN-RVHEFA 466
L +LEP ++ +SN+Y +G + +RK +K ++K P +SW+ +N ++H+F
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 538
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
G HP I KLEEL+ +L +GY P+ S +D+ + K L H+EKLAL F+
Sbjct: 539 PGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFS 598
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
++ S I IMKN+R+C+DCH FM+LAS++ GK I++RD+ RFHHF+ CSC
Sbjct: 599 LLTT----NRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCG 654
Query: 587 DYW 589
D+W
Sbjct: 655 DFW 657
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/593 (36%), Positives = 324/593 (54%), Gaps = 30/593 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I L A L ++ QLH + P+ +T+ L+++YAK G L A+ +FD
Sbjct: 73 IPIALKSASRLPHPLRAGEQLHARSLK-LPSHTNPHVLTS-LLSLYAKCGLLHRAQRVFD 130
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISC----DYLH 121
EMP + V WTALI+ Y G+ E + + P+ F+ VL +C D
Sbjct: 131 EMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLAT 190
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ V A + + V+VA A +++Y K C + +A +VF+ M ++ ++W +M+ +
Sbjct: 191 GETVWRAAEQEGVAQSVFVATAAVDLYVK-CGEMAKAREVFDKMRHKDAVAWGAMVGGY- 248
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A + EAL LF +Q EGM PD + L AC L
Sbjct: 249 ------------ASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAI 296
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
++ F D+ V+ ALI YA+CGS + VF +M D++ WN+++ + G K
Sbjct: 297 RMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEK 356
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
A L M V+ + TF+ LL +C+H GL+Q+G + FH+M + + + P+++HY CM
Sbjct: 357 IAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCM 416
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLL R G + EA +L+ +MPM ++VI LLG C+ H T LAE +L LEP +S
Sbjct: 417 VDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNS 476
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SNIY G + A +R +MK V K P SW+E E +VHEF G K HP +
Sbjct: 477 GNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSD 536
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+KKL+EL ++K MGY P T + + D+E+E KE L HHSEKLA+ F ++ G
Sbjct: 537 QIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGP---- 592
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH +KL S + +EI+VRD+NRFH F+D CSCNDYW
Sbjct: 593 GETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 314/561 (55%), Gaps = 30/561 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV +MY K DDAR LFDE+P+RN+ +W A IS G E F
Sbjct: 92 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 151
Query: 101 QY-FFPNEFSLASVLISC-DYLH---GKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
+ PN + + L +C D+LH G +H L L+ D V V N LI+ Y K
Sbjct: 152 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 211
Query: 156 AWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ ++ F M +N +SW S++AA+ + +E+A L+ + +++ +
Sbjct: 212 SSEIIFTEMGTKNAVSWCSLVAAY-------------VQNHEDEKASVLYLRSRKDIVET 258
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
S VL ACAG+ ++H+ K E + +AL+ Y +CG I S+Q F
Sbjct: 259 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 318
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGL 329
D+M +LV+ NS++ YA GQ AL LF M P+ TFVSLLSACS AG
Sbjct: 319 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 378
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+ G K+F SM +G+ P +HY+C+VD+LGR G + A + I++MP++P +W L
Sbjct: 379 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 438
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+CR HG+ +L LAA L +L+P DS V +SN + +G + +A +R+E+KG ++K
Sbjct: 439 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 498
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWI ++N+VH F + + H + I L +L +++ GY P+ L+L+D+EEE
Sbjct: 499 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 558
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K ++ HHSEKLAL F G L SV IRI KN+RIC DCH+F K S + +EI+
Sbjct: 559 KAAEVSHHSEKLALAF-----GLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREII 613
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+NRFH FKD ICSC DYW
Sbjct: 614 VRDNNRFHRFKDGICSCKDYW 634
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 179/367 (48%), Gaps = 38/367 (10%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF------ 104
MY+K + + AR + P RNVVSWT+LISG AQ+G+ F + L FF
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGH-------FSTALVEFFEMRREG 53
Query: 105 --PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAW 157
PN+F+ + L GK +HALA+K V+V + +MY K+ D+A
Sbjct: 54 VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 113
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
K+F+ + RN+ +WN+ I+ +AIE F + FR++ P+
Sbjct: 114 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE----------FRRIDGH---PNSI 160
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
TF L AC+ + +H L+ + GF+ D + N LI Y +C I S+ +F +M
Sbjct: 161 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 220
Query: 278 TYHDLVSWNSILKAYALHGQAKEA--LQLFSNMNVQPDSATFV-SLLSACSHAGLVQEGN 334
+ VSW S++ AY + + ++A L L S ++ S + S+LSAC+ ++ G
Sbjct: 221 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 280
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ H+ V + + +VD+ G+ G I ++E+ EMP E + V + L+G
Sbjct: 281 SI-HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAH 338
Query: 395 HGETRLA 401
G+ +A
Sbjct: 339 QGQVDMA 345
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 332/594 (55%), Gaps = 29/594 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ + ACA G+++ + + + D+FV + L+++YA++G + DA +
Sbjct: 108 STTFTLALSACARLGDLRGGESVRDRAFD--AGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DY 119
F MP+R+ V+W+ +++G+ G + +++ + + +E + V+ +C +
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAF 178
G VH L+ + V A +L++MY+K+ D A +VF M RN +SW++MI+ F
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ +EAL LFR +Q G+ PD L AC+ + + +V
Sbjct: 286 -------------AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSV 332
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H I + F+ + ++ A I Y++CGS++ ++ +F+ ++ DL+ WN+++ HG+
Sbjct: 333 HGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRG 391
Query: 299 KEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++AL LF MN ++PD ATF SLLSA SH+GLV+EG F M+ + + P HY C
Sbjct: 392 QDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVC 451
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VDLL R G + EA L+ M EP IW LL C + + L E A + +L+P D
Sbjct: 452 LVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDD 511
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+SN+Y + ++K R +RK MK S +K PG S IEI H F + HPQR
Sbjct: 512 VGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQR 571
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
E I K+ +L +++ MGY+P T HD+EEE KE+QL +HSE+LA+ F ++N G R
Sbjct: 572 EEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTR 631
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+KN+R+C DCH+ +K S + +EIVVRD+ RFHHFKD +CSC DYW
Sbjct: 632 ----LVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 182/368 (49%), Gaps = 35/368 (9%)
Query: 44 VTNHLINMYAKFGYLDDARH-LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+ + L YA+ G L A L ++ +W A+I+ +++ G+ R+F +L
Sbjct: 44 LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALPPA 103
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAW 157
P+ + L +C D G+ V A V+V ++L+++Y++ A +A
Sbjct: 104 ARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAV 163
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
KVF M R+ ++W++M+A F + AI+ ++R+++ +G+ D
Sbjct: 164 KVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQ-------------MYRRMREDGVKGDEV 210
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
V++AC R ++VH + ++G D V A +L+ YA+ G + ++ +VF M
Sbjct: 211 VMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLM 270
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ + VSW++++ +A +GQ+ EAL+LF NM +QPDS VS L ACS+ G ++ G
Sbjct: 271 VHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR 330
Query: 335 KVFHSMLENHGVVPQLDHYACM-----VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V HG + + + C+ +D+ + G + A+ L M + D ++W+ ++
Sbjct: 331 SV-------HGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLF-NMISDRDLILWNAMI 382
Query: 390 GSCRKHGE 397
C HG
Sbjct: 383 ACCGAHGR 390
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 6/210 (2%)
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
++ + AL +FR L PD TF++ L ACA L R +V G++DD
Sbjct: 85 SRRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ ++L+H YAR G++ + +VF +M D V+W++++ + GQ +A+Q++ M
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
V+ D + ++ AC+ A V+ G V H L HG+ + +VD+ + G +L+
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASV-HGHLLRHGMRMDVVTATSLVDMYAKNG-LLD 261
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+ + + + V WS ++ ++G++
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQS 291
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/579 (36%), Positives = 322/579 (55%), Gaps = 30/579 (5%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
++ QLH + P+ +T+ L+ +YA+ G L A+ +FDEMP + VSWTALI
Sbjct: 87 LRAGEQLHARSLK-LPSHTNPHVLTS-LLTLYARCGLLHRAQRVFDEMPHPSTVSWTALI 144
Query: 81 SGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLD 135
+ Y G+ E + + P+ F+ VL +C D G+ V A + +
Sbjct: 145 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIA 204
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V+VA A +++Y K C + +A +VF+ M ++ ++W +M+ + A
Sbjct: 205 QSVFVATAAVDLYVK-CGEMAKAREVFDKMRDKDAVAWGAMVGGY-------------AS 250
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+ EAL LF +Q EG+ PD + L AC L ++ F D+ V+
Sbjct: 251 NGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVL 310
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
ALI YA+CGS + + VF +M D++ WN+++ + G K A L M V
Sbjct: 311 GTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGV 370
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+ + TF+ LL +C+H GL+Q+G + FH+M + + + P+++HY C+VDLL R G + EA
Sbjct: 371 KLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAH 430
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+LI +MPM ++VI LLG C+ H LAE T+L +LEP +S +V +SNIY G
Sbjct: 431 QLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRG 490
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ A +R +MK V K P SW+E E +VHEF G K HP + I+KKL+EL ++K
Sbjct: 491 RWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 550
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
MGY P T + + D+E+E KE L HHSEKLA+ F ++ G IR+ KN+R+C
Sbjct: 551 TMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGP----GETIRVTKNLRVCS 606
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +KL S + +EI+VRD+NRFH F+D CSCNDYW
Sbjct: 607 DCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/591 (36%), Positives = 341/591 (57%), Gaps = 29/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L AC +I+ ++ +MIN+ EP DL+V N ++ M+ K G + DAR LFDE
Sbjct: 121 YDALVSACVGLRSIRGVKRVFNYMINS-GFEP-DLYVMNRVLFMHVKCGLMLDARKLFDE 178
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCD-----YLHG 122
MP+++V SW ++ G GN E FRLF + + F + +I G
Sbjct: 179 MPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVG 238
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +H+ ALK + +V+ ALI+MYSK + ++A VF+ M + + WNS+IA++
Sbjct: 239 KQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASY--- 295
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A EEAL L+ +++ G D T SIV++ CA L + HA H+
Sbjct: 296 ----------ALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAA 345
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ ++GF D V AL+ Y++ G + ++ VF++M + +++SWN+++ Y HGQ +EA
Sbjct: 346 LVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEA 405
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+++F M V P TF+++LSACS++GL Q G ++F+SM +H V P+ HYACM++
Sbjct: 406 VEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIE 465
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR + EA LIR P +P + +W+ LL +CR H L +LAA KL +EP
Sbjct: 466 LLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCN 525
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ + N+Y SG +A I + +K +R P SW+E++ + + F G K H Q + I
Sbjct: 526 YIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEI 585
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
++K++ L+ ++ GY E L D++EE ++ L +HSEKLA+ F ++N +
Sbjct: 586 YQKVDNLMVEICKHGYAEENETLLPDVDEE-EQRILKYHSEKLAIAFGLINTPHW----T 640
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++I + R+C DCH+ +KL + + G+EIVVRD++RFHHF++ CSC DYW
Sbjct: 641 PLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 20/268 (7%)
Query: 144 LINMYSKSCADEAW--------KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
L N +S+ C + K E ME + ++ I L +Q IE
Sbjct: 37 LCNPFSRICCSSSMDQKLKPKPKKVEYMERNVPVLEDTQIRKTSPSGLCSQ-IEKLVVCN 95
Query: 196 NEEEALFLFR--QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
EA+ LF +L+ +G T+ ++ AC GL + R V + + GFE D +
Sbjct: 96 RHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYV 155
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
N ++ + +CG + ++++FD+M D+ SW +++ G EA +LF M + +
Sbjct: 156 MNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFN 215
Query: 314 ---SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILE 368
S TF +++ A + GLVQ G ++ HS GV DH+ ++D+ + G I +
Sbjct: 216 DGRSRTFATMIRASAGLGLVQVGKQI-HSCALKRGVGD--DHFVSCALIDMYSKCGSIED 272
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHG 396
A + +MP E +V W+ ++ S HG
Sbjct: 273 AHCVFDQMP-EKTTVGWNSIIASYALHG 299
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/595 (35%), Positives = 339/595 (56%), Gaps = 27/595 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + + ++ AC+ G + Q ++H +I++ E DL + N L+ MYA+ LDDA
Sbjct: 220 SVRTFTSVLSACSNLGLLDQGRKIHA-LISSRGTE-LDLSLQNALLTMYARCKCLDDAAK 277
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----D 118
+F +P+R+VVSW+A+I+ +A+ +E + + L+ PN ++ ASVL++C D
Sbjct: 278 IFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGD 337
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAA 177
G+ VH L + AL+++Y S DEA +F+ +E R+ W +I
Sbjct: 338 LRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGG 397
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ +EL+ +MKN + + +S V+ ACA L A
Sbjct: 398 YSKQGHRTGVLELYREMKNTTK------------VPATKIIYSCVISACASLGAFADARQ 445
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
HS I G D V+A +L++ Y+R G++ ++QVFDKM+ D ++W +++ YA HG+
Sbjct: 446 AHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGE 505
Query: 298 AKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
AL L+ M ++ P TF+ +L ACSHAGL ++G ++F S+ ++ + P + HY+
Sbjct: 506 HGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYS 565
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C++DLL R GR+ +AE+LI MP+EP+ V WS LLG+ R H + + A AA ++ +L+P
Sbjct: 566 CIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPV 625
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D +V +SN++ ++G+ +R M V+K G SWIE+ +++HEF G HP+
Sbjct: 626 DPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPR 685
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ IF +L+ L ++K GYVPE+ LHD+ E+ KE L HSEKLA+ F ++
Sbjct: 686 FQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAP-- 743
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +RI +RIC DCH+ +K S + +EI+VRDS+RFH F+D CSC DYW
Sbjct: 744 --GTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 200/388 (51%), Gaps = 35/388 (9%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
+++ Q+H+ + ++F+ N ++ Y K G + AR FD + ++N SW ++
Sbjct: 39 DLESVRQIHDRISGA---ASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSM 95
Query: 80 ISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GKLVHA-LALKFS 133
++ YAQ+G+ L+ + LQ PN +VL +C + GK +H+ ++
Sbjct: 96 LTAYAQNGHYRAALDLYKRMDLQ---PNPVVYTTVLGACASIEALEEGKAIHSRISGTKG 152
Query: 134 LDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAAFRACKLEAQAIELF 191
L V + N+L+ MY+K + ++A ++FE M R +V SWN+MIAA+
Sbjct: 153 LKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAY------------- 199
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
A+ + EEA+ L+ + E P TF+ VL AC+ L +H+LI+ G E D
Sbjct: 200 AQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDL 256
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ NAL+ YARC + + ++F ++ D+VSW++++ A+A EA++ +S M
Sbjct: 257 SLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLE 316
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
V+P+ TF S+L AC+ G ++ G V +L N G L + +VDL G + E
Sbjct: 317 GVRPNYYTFASVLLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDE 375
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHG 396
A L ++ D +W+VL+G K G
Sbjct: 376 ARSLFDQIE-NRDEGLWTVLIGGYSKQG 402
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/554 (36%), Positives = 317/554 (57%), Gaps = 28/554 (5%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF- 104
N LI Y K G L+ AR LFDEMP RNV +W A+++G G EE F ++ +
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWK 158
P+E+ L S+ C D + G+ VHA ++ LD + V ++L +MY + C +
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMR-CGFLRDGEA 122
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+ N++S N+ I+ + + E AL F ++ G+ + T
Sbjct: 123 ALRALPSLNIVSCNTTISGR-------------TQNGDAEGALEFFCLMRGAGVEANAVT 169
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F + +C+ L +H+L K G + + +L+H Y+RCG + S++V + +
Sbjct: 170 FVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYS 229
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
DLV ++++ AY HG ++A+ LF M +P+ TF++LL ACSH+GL EG
Sbjct: 230 GTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMN 289
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F M + +G+ P + HY C+VDLLGR G + EAE LI MP++PD VIW LL +C+
Sbjct: 290 CFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQ 349
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
+ +AE A ++ +L+P DS +V +SNI S + +R+ M+ VRK PG+SW
Sbjct: 350 KKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSW 409
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
+E++ ++H+F +G + H ++ I + LEE++ +++ GY P+ S+ HD+E+E KE L
Sbjct: 410 VELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLA 469
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HHSEKLA+ FA ++ E IR+MKN+R+C DCH +KL S ++G+EIVVRD +RF
Sbjct: 470 HHSEKLAIAFAFLSL----PEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRF 525
Query: 576 HHFKDRICSCNDYW 589
HHFKD CSC DYW
Sbjct: 526 HHFKDGKCSCGDYW 539
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 25/346 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+LF CA ++ Q+H +++ + + +D+ V + L +MY + G+L D +
Sbjct: 70 GSLFRCCAGLRDVVSGRQVHAYVVRSGLD--RDMCVGSSLAHMYMRCGFLRDGEAALRAL 127
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HGK 123
P N+VS ISG Q+G+AE FC + N + S + SC L G+
Sbjct: 128 PSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQ 187
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HALA+K +D V V +L++MYS+ C ++ +V +++ ++MI+A
Sbjct: 188 QIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA----- 242
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ + ++A+ LF+Q+ G P+ TF +L AC+ + L+
Sbjct: 243 --------YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELM 294
Query: 243 AK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKE 300
K YG + ++ R G ++ ++ + M D V W ++L A +
Sbjct: 295 TKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDM 354
Query: 301 ALQLFSN-MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
A ++ + + P DSA++V L + + + ++ +KV +M E +
Sbjct: 355 AERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQN 400
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/595 (35%), Positives = 339/595 (56%), Gaps = 27/595 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + + ++ AC+ G + Q ++H +I++ E DL + N L+ MYA+ LDDA
Sbjct: 219 SVRTFTSVLSACSNLGLLDQGRKIHA-LISSRGTE-LDLSLQNALLTMYARCKCLDDAAK 276
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----D 118
+F +P+R+VVSW+A+I+ +A+ +E + + L+ PN ++ ASVL++C D
Sbjct: 277 IFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGD 336
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAA 177
G+ VH L + AL+++Y S DEA +F+ +E R+ W +I
Sbjct: 337 LRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGG 396
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ +EL+ +MKN + + +S V+ ACA L A
Sbjct: 397 YSKQGHRTGVLELYREMKNTTK------------VPATKIIYSCVISACASLGAFADARQ 444
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
HS I G D V+A +L++ Y+R G++ ++QVFDKM+ D ++W +++ YA HG+
Sbjct: 445 AHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGE 504
Query: 298 AKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
AL L+ M ++ P TF+ +L ACSHAGL ++G ++F S+ ++ + P + HY+
Sbjct: 505 HGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYS 564
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C++DLL R GR+ +AE+LI MP+EP+ V WS LLG+ R H + + A AA ++ +L+P
Sbjct: 565 CIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPV 624
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D +V +SN++ ++G+ +R M V+K G SWIE+ +++HEF G HP+
Sbjct: 625 DPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPR 684
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ IF +L+ L ++K GYVPE+ LHD+ E+ KE L HSEKLA+ F ++
Sbjct: 685 FQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAP-- 742
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +RI +RIC DCH+ +K S + +EI+VRDS+RFH F+D CSC DYW
Sbjct: 743 --GTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 200/387 (51%), Gaps = 34/387 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
+++ Q+H+ + ++F+ N ++ Y K G + AR FD + ++N SW ++
Sbjct: 39 DLESVRQIHDRISGA---ASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSM 95
Query: 80 ISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHA-LALKFS 133
++ YAQ+G+ L+ + LQ PN +VL +C + GK +H+ ++
Sbjct: 96 LTAYAQNGHYRAALDLYKRMDLQ---PNPVVYTTVLGACASIKALEEGKAIHSRISGTKG 152
Query: 134 LDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
L V + N+L+ MY+K + ++A ++FE M R+V SWN+MIAA+ A
Sbjct: 153 LKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAY-------------A 199
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ + EEA+ L+ + E P TF+ VL AC+ L +H+LI+ G E D
Sbjct: 200 QSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLS 256
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ NAL+ YARC + + ++F ++ D+VSW++++ A+A EA++ +S M
Sbjct: 257 LQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG 316
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
V+P+ TF S+L AC+ G ++ G V +L N G L + +VDL G + EA
Sbjct: 317 VRPNYYTFASVLLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDEA 375
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHG 396
L ++ D +W+VL+G K G
Sbjct: 376 RSLFDQIE-NRDEGLWTVLIGGYSKQG 401
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/593 (36%), Positives = 346/593 (58%), Gaps = 31/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A + A +I+ Q+H ++ N ++FV N L++ Y+K + +A LF E
Sbjct: 302 FAAILTAGIQLDDIEFGQQVHGFVVK--CNFVWNVFVANALLDFYSKHDRVVEASKLFYE 359
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVL----ISCDYLHG 122
MP+ + +S+ L++ YA +G +E LF L F F A++L IS + G
Sbjct: 360 MPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIG 419
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
+ +H+ + + + V N+L++MY+K C + EA ++F ++ ++ + W +MI+++
Sbjct: 420 RQIHSQTIVTDAISEILVGNSLVDMYAK-CGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L E+ L LF ++QR + D T++ +++ACA L + +HS
Sbjct: 479 KGLH-------------EDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHS 525
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I G+ + +AL+ YA+CGSI + Q+F +M + VSWN+++ AYA +G
Sbjct: 526 HIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDC 585
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
L+LF M +QPDS + +S+L ACSH GLV+EG + F SM + +VP+ +HYA +
Sbjct: 586 TLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTI 645
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDS 416
D+L R GR EAEKL+ +MP EPD ++WS +L SC H LA+ AA +L ++ D+
Sbjct: 646 DMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDA 705
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V MSNIY +G ++ ++K M+ V+K P SW+EI+++ H F + K HPQ
Sbjct: 706 APYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMR 765
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I KKL+EL ++ GY P++S ALH+++EE K E L +HSE++A+ FA+++ E
Sbjct: 766 EIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTP----E 821
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I +MKN+R C DCH +K+ S ++ +EI VRDS+RFHHF+D C+C DYW
Sbjct: 822 GSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 192/387 (49%), Gaps = 30/387 (7%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A +L + M + +++F TN +I Y K G L +AR LFD M +R V+WT
Sbjct: 115 GDLNGARKLFDEMPH------KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTM 168
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHG----KLVHALALKFS 133
LI GYAQ+ E F LF + ++ P+ SLA++L + VH+ +K
Sbjct: 169 LIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLG 228
Query: 134 LDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
D+ + V+N+L++ Y K+ + A+++F ++ R+ +++N+++ + +AI LF
Sbjct: 229 YDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFF 288
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
KM Q G P TF+ +L A L VH + K F +
Sbjct: 289 KM-------------QEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVF 335
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ANAL+ Y++ + + ++F +M D +S+N ++ YA +G+ KE+L+LF +
Sbjct: 336 VANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTG 395
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ F +LLS + + + G ++ HS + ++ +VD+ + G EA
Sbjct: 396 FDRRNFPFATLLSIAAISLNLDIGRQI-HSQTIVTDAISEILVGNSLVDMYAKCGEFGEA 454
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ ++ ++ SV W+ ++ S + G
Sbjct: 455 NRIFSDLAIQ-SSVPWTAMISSYVQKG 480
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 139/287 (48%), Gaps = 24/287 (8%)
Query: 125 VHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
V A +K + + Y +N L+ + + + A K+F+ M +N+ S N+MI +
Sbjct: 88 VDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGN 147
Query: 184 EAQAIELFAKM----------------KNEE--EALFLFRQLQREGMAPDWCTFSIVLKA 225
++A LF M +N + EA LF ++ R G+ PD + + +L
Sbjct: 148 LSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSG 207
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
+ VHS + K G++ V++N+L+ +Y + S+ L+ Q+F+ + D V++
Sbjct: 208 FTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTF 267
Query: 286 NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
N++L Y+ G +EA+ LF M +P TF ++L+A ++ G +V H +
Sbjct: 268 NALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQV-HGFVV 326
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V + ++D + R++EA KL EMP E D + ++VL+
Sbjct: 327 KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMP-EVDGISYNVLV 372
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/593 (36%), Positives = 332/593 (55%), Gaps = 31/593 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +L CAL K LH ++ + DL++ L+NMYA G L AR LF+
Sbjct: 82 FPSLLKGCALLLEFKVGKVLHGQVVKYMLH--SDLYIETTLLNMYAACGDLKSARFLFER 139
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----G 122
M RN V WT++ISGY ++ E L+ + + F P+E ++A+++ +C L G
Sbjct: 140 MGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVG 199
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
+H+ + + + +AL+NMY+K C D A +VF+ + ++V +W+++I +
Sbjct: 200 MKLHSHIREMDMKICAVLGSALVNMYAK-CGDLKTARQVFDQLSDKDVYAWSALIFGY-- 256
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQR-EGMAPDWCTFSIVLKACAGLVTERHASAVH 239
K EAL LFR++ M P+ T V+ ACA L VH
Sbjct: 257 -----------VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVH 305
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I + + N+LI +++CG I +K++FD M+Y DL+SWNS++ ALHG +
Sbjct: 306 DYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGR 365
Query: 300 EAL---QLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL L ++QPD TF+ +L+ACSHAGLVQEG K+F+ + +GV + +HY CM
Sbjct: 366 EALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCM 425
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLL R G + EA + IR MP++PD IW +LG+CR + L E AA L +LEP +
Sbjct: 426 VDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTND 485
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ +SNIY +N+ + +R+ M ++K PG S + I+N H F +G HP+
Sbjct: 486 GVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIA 545
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I L ++ +LK +GYV +TS L +I++ KEE + HSEKLAL + ++ R
Sbjct: 546 EISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGR- 604
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I I+KN+R+C DCH +KL S + ++I +RD NRFHHFKD CSC DYW
Sbjct: 605 ---IVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 29/243 (11%)
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A+ VF + +V++WNSM+ AF + +A++ + +M L+R PD
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEM------------LERSRNVPD 78
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
TF +LK CA L+ + +H + KY D I L++ YA CG + ++ +F+
Sbjct: 79 RFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFE 138
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+M + + V W S++ Y + EAL L+ M PD T +L+SAC+ +
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198
Query: 333 GNKVFHSMLENHGVVPQLDHYAC------MVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G K+ H + ++D C +V++ + G + A ++ ++ + D WS
Sbjct: 199 GMKL-------HSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLS-DKDVYAWS 250
Query: 387 VLL 389
L+
Sbjct: 251 ALI 253
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 255 NALIHAYARCGSISL--SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---- 308
N LI GS+ + + VF D+++WNS+L+A+ + ALQ ++ M
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
NV PD TF SLL C+ + G KV H + + + L ++++ G +
Sbjct: 74 RNV-PDRFTFPSLLKGCALLLEFKVG-KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKH 395
A L M + V+W+ ++ K+
Sbjct: 132 SARFLFERMG-HRNKVVWTSMISGYMKN 158
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/560 (36%), Positives = 330/560 (58%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFD--EMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N LI +YAK L AR +F+ +P+R +VSWTA++S YAQ+G E +F
Sbjct: 153 DVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQ 212
Query: 99 LLQY-FFPNEFSLASVL--ISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ + P+ +L SVL +C D G+ +HA +K L+ + +L MY+K
Sbjct: 213 MRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQ 272
Query: 154 DEAWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
K+ F+ M+ N+I WN+MI+ + AI+LF +M N++ +
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKD-------------V 319
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD + + + ACA + + A + +++ + DD I++ALI +A+CGS+ ++
Sbjct: 320 RPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARS 379
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD+ D+V W++++ Y LHGQA+EA+ L+ M V P+ TF+ LL AC+H+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGM 439
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+EG F+ M +H + PQ HYAC++DLLGR G + +A ++I+ MP++P +W LL
Sbjct: 440 VREGWWFFNRM-ADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+C+KH L + AA +L ++P ++ +VQ+SN+Y + +++ +R MK + K
Sbjct: 499 SACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SW+E+ R+ F G K HP+ E I +++E + +LK G+V +LHD+ +E
Sbjct: 559 DVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEE 618
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
EE L HSE++ + + +++ + + +RI KN+R CV+CH KL S L+G+EIVV
Sbjct: 619 AEETLCSHSERITIAYGLISTP----QGTTLRITKNLRACVNCHAATKLISKLVGREIVV 674
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFKD +CSC DYW
Sbjct: 675 RDTNRFHHFKDGVCSCGDYW 694
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 205/417 (49%), Gaps = 43/417 (10%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFGYL 58
+HS YA+L + ++Q +H ++ F F+ LI+ + +G +
Sbjct: 18 IHSDSFYASLIDSSTHKAQLRQ---IHARLLVLGLQFSG-----FLITKLIHASSSYGDI 69
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC 117
AR +FD++P+ V W A+I GY+++ + ++ ++ + L P+ F+ +L +C
Sbjct: 70 TFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKAC 129
Query: 118 DYLH----GKLVHALALKFSLDAHVYVANALINMYSK----SCADEAWKVFENMEF--RN 167
L G+ VHA + +A V+V N LI +Y+K CA VFE + R
Sbjct: 130 GGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCAR---TVFEGLPLPERT 186
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
++SW ++++A +A+ EAL +F Q+++ + PD VL A
Sbjct: 187 IVSWTAIVSA-------------YAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFT 233
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
L ++H+ + K G E + + +L YA+CG ++ +K +FDKM +L+ WN+
Sbjct: 234 CLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++ YA +G AK+A+ LF M +V+PD+ + S +SAC+ G +++ + +
Sbjct: 294 MISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQA-RWMDEYVSRS 352
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + ++D+ + G + E + + + ++ D V+WS ++ HG+ R A
Sbjct: 353 DYRDDVFISSALIDMFAKCGSV-ECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREA 408
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/579 (36%), Positives = 322/579 (55%), Gaps = 30/579 (5%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
++ QLH + P+ +T+ L+ +YA+ G L A+ +FDEMP + VSWTALI
Sbjct: 134 LRAGEQLHARSLK-LPSHTNPHVLTS-LLTLYARCGLLHRAQRVFDEMPHPSTVSWTALI 191
Query: 81 SGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLD 135
+ Y G+ E + + P+ F+ VL +C D G+ V A + +
Sbjct: 192 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIA 251
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V+VA A +++Y K C + +A +VF+ M ++ ++W +M+ + A
Sbjct: 252 QSVFVATAAVDLYVK-CGEMAKAREVFDKMRDKDAVAWGAMVGGY-------------AS 297
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+ EAL LF +Q EG+ PD + L AC L ++ F D+ V+
Sbjct: 298 NGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVL 357
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
ALI YA+CGS + + VF +M D++ WN+++ + G K A L M V
Sbjct: 358 GTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGV 417
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+ + TF+ LL +C+H GL+Q+G + FH+M + + + P+++HY C+VDLL R G + EA
Sbjct: 418 KLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAH 477
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+LI +MPM ++VI LLG C+ H LAE T+L +LEP +S +V +SNIY G
Sbjct: 478 QLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRG 537
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ A +R +MK V K P SW+E E +VHEF G K HP + I+KKL+EL ++K
Sbjct: 538 RWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 597
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
MGY P T + + D+E+E KE L HHSEKLA+ F ++ G IR+ KN+R+C
Sbjct: 598 TMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGP----GETIRVTKNLRVCS 653
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +KL S + +EI+VRD+NRFH F+D CSCNDYW
Sbjct: 654 DCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/625 (35%), Positives = 332/625 (53%), Gaps = 62/625 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A+ AC ++ ++H + I DL V N L++ YAK ++ AR F +
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIK-VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 424
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-------------------LQY------- 102
+ ++VSW A+++GYA G+ EE L + QY
Sbjct: 425 KQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAAL 484
Query: 103 -FF---------PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMY 148
FF PN +++ L +C + GK +H L+ ++ V +ALI+MY
Sbjct: 485 EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMY 544
Query: 149 SKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
S + E A VF + R+V+ WNS+I+A C +++ AL L R++
Sbjct: 545 SGCDSLEVACSVFSELSTRDVVVWNSIISA---CAQSGRSVN----------ALDLLREM 591
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ + T L AC+ L R +H I + G + I N+LI Y RCGSI
Sbjct: 592 NLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSI 651
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSAC 324
S+++FD M DLVSWN ++ Y +HG +A+ LF M ++P+ TF +LLSAC
Sbjct: 652 QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSAC 711
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH+GL++EG K F M + + P ++ YACMVDLL R G+ E + I +MP EP++ +
Sbjct: 712 SHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAV 771
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LLG+CR H LAE AA L +LEP S +V M+NIY +G + A IR MK
Sbjct: 772 WGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKE 831
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
V K PG SWIE++ ++H F G HP E I K+E L +K +GYVP+T+ L D
Sbjct: 832 RGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQD 891
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
++E+ KE L HSEK+AL F +++ + + +RI+KN+R+C DCH+ K S +
Sbjct: 892 VDEDEKEFSLCGHSEKIALAFGLISTTA----GTPLRIIKNLRVCGDCHSATKFISKVEK 947
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
++I++RD+ RFHHF D +CSC DYW
Sbjct: 948 RDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 197/442 (44%), Gaps = 75/442 (16%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+IYA++ C N++ Q+H ++ N + + F+ + L+ +Y + G ++DAR +F
Sbjct: 90 EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE--FLGSRLLEVYCQTGCVEDARRMF 147
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYL 120
D+M +RNV SWTA++ Y G+ EE +LF ++ + P+ F V +C +Y
Sbjct: 148 DKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYR 207
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAF 178
GK V+ L + + V ++++M+ K C D A + FE +EF++V WN M++ +
Sbjct: 208 VGKDVYDYMLSIGFEGNSCVKGSILDMFIK-CGRMDIARRFFEEIEFKDVFMWNIMVSGY 266
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ +A++ + MK G+ PD T+
Sbjct: 267 TSKGEFKKALKCISDMK-------------LSGVKPDQVTW------------------- 294
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-----YHDLVSWNSILKAYA 293
NA+I YA+ G + + F +M ++VSW +++
Sbjct: 295 ----------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSE 338
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G EAL +F M V+P+S T S +SAC++ L++ G ++ ++ + L
Sbjct: 339 QNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDL 398
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKL 408
+VD + R +E + M + D V W+ +L + R E + L+ K
Sbjct: 399 LVGNSLVDYYAKC-RSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKF 457
Query: 409 KQLEP------GDSLGFVQMSN 424
+ +EP G GF Q +
Sbjct: 458 QGIEPDIITWNGLVTGFTQYGD 479
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 187/418 (44%), Gaps = 71/418 (16%)
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH----GKLV 125
+ V++ A++ N +EC ++ S+LQ C L+ G V
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQ--------------KCRKLYNLRLGFQV 111
Query: 126 HALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
HA + +D ++ + L+ +Y ++ C ++A ++F+ M RNV SW +++
Sbjct: 112 HAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIM--------- 162
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
E++ + + EE + LF + EG+ PD F V KAC+ L R V+ +
Sbjct: 163 ----EMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLS 218
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GFE ++ + +++ + +CG + ++++ F+++ + D+ WN ++ Y G+ K+AL+
Sbjct: 219 IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKC 278
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
S+M V+PD T+ +++S + +G +E +K F M P + + ++
Sbjct: 279 ISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSE 338
Query: 362 RVGRILEAEKLIREMPME---PDSVIWSVLLGSCR-----KHG----------------- 396
+ G EA + R+M +E P+S+ + + +C +HG
Sbjct: 339 QNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDL 398
Query: 397 -----------ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ R E+A K ++ D + + M Y L GS +A + EMK
Sbjct: 399 LVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 332/594 (55%), Gaps = 29/594 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ + ACA G+++ + + + D+FV + L+++YA++G + DA +
Sbjct: 108 STTFTLALSACARLGDLRGGESVRDRAFDA--GYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DY 119
F MP+R+ V+W+ +++G+ G + +++ + + +E + V+ +C +
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAF 178
G VH L+ + V A +L++MY+K+ D A +VF M RN +SW++MI+ F
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ +EAL LFR +Q G+ PD L AC+ + + +V
Sbjct: 286 -------------AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSV 332
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H I + F+ + ++ A I Y++CGS++ ++ +F+ ++ DL+ WN+++ HG+
Sbjct: 333 HGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRG 391
Query: 299 KEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++AL LF MN ++PD ATF SLLSA SH+GLV+EG F M+ + + P HY C
Sbjct: 392 QDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVC 451
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VDLL R G + EA L+ M EP IW LL C + + L E A + +L+P D
Sbjct: 452 LVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDD 511
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+SN+Y + ++K R +RK MK S +K PG S IEI H F + HPQR
Sbjct: 512 VGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQR 571
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
E I K+ +L +++ MGY+P T HD+EEE KE+QL +HSE+LA+ F ++N G R
Sbjct: 572 EEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTR 631
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+KN+R+C DCH+ +K S + +EIVVRD+ RFHHFKD +CSC DYW
Sbjct: 632 ----LVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 181/366 (49%), Gaps = 35/366 (9%)
Query: 46 NHLINMYAKFGYLDDARH-LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF 104
+ L YA+ G L A L ++ +W A+I+ +++ G+ R+F +L
Sbjct: 46 SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALPPAAR 105
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKV 159
P+ + L +C D G+ V A V+V ++L+++Y++ A +A KV
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F M R+ ++W++M+A F + AI+ ++R+++ +G+ D
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQ-------------MYRRMREDGVKGDEVVM 212
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
V++AC R ++VH + ++G D V A +L+ YA+ G + ++ +VF M +
Sbjct: 213 IGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVH 272
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
+ VSW++++ +A +GQ+ EAL+LF NM +QPDS VS L ACS+ G ++ G V
Sbjct: 273 RNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSV 332
Query: 337 FHSMLENHGVVPQLDHYACM-----VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
HG + + + C+ +D+ + G + A+ L M + D ++W+ ++
Sbjct: 333 -------HGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLF-NMISDRDLILWNAMIAC 384
Query: 392 CRKHGE 397
C HG
Sbjct: 385 CGAHGR 390
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 6/210 (2%)
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
++ + AL +FR L PD TF++ L ACA L R +V G++DD
Sbjct: 85 SRRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ ++L+H YAR G++ + +VF +M D V+W++++ + GQ +A+Q++ M
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
V+ D + ++ AC+ A V+ G V H L HG+ + +VD+ + G +L+
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASV-HGHLLRHGMRMDVVTATSLVDMYAKNG-LLD 261
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+ + + + V WS ++ ++G++
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQS 291
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 314/561 (55%), Gaps = 30/561 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV +MY K DDAR LFDE+P+RN+ +W A IS G E F
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 101 QY-FFPNEFSLASVLISC-DYLH---GKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
+ PN + + L +C D+LH G +H L L+ D V V N LI+ Y K
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 156 AWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ ++ F M +N +SW S++AA+ + +E+A L+ + +++ +
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAY-------------VQNHEDEKASVLYLRSRKDIVET 308
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
S VL ACAG+ ++H+ K E + +AL+ Y +CG I S+Q F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGL 329
D+M +LV+ NS++ YA GQ AL LF M P+ TFVSLLSACS AG
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+ G K+F SM +G+ P +HY+C+VD+LGR G + A + I++MP++P +W L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+CR HG+ +L LAA L +L+P DS V +SN + +G + +A +R+E+KG ++K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWI ++N+VH F + + H + I L +L +++ GY P+ L+L+D+EEE
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 608
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K ++ HHSEKLAL F G L SV IRI KN+RIC DCH+F K S + +EI+
Sbjct: 609 KAAEVSHHSEKLALAF-----GLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREII 663
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+NRFH FKD ICSC DYW
Sbjct: 664 VRDNNRFHRFKDGICSCKDYW 684
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 192/391 (49%), Gaps = 39/391 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H ++ + P F+ N+LINMY+K + + AR + P RNVVSWT+LISG AQ+
Sbjct: 28 VHARIVKTL-DSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQN 86
Query: 87 GNAEECFRLFCSLLQYFF--------PNEFSLASVLISCDYLH----GKLVHALALKFSL 134
G+ F + L FF PN+F+ + L GK +HALA+K
Sbjct: 87 GH-------FSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 135 DAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V+V + +MY K+ D+A K+F+ + RN+ +WN+ I+ +AIE F +
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
FR++ P+ TF L AC+ + +H L+ + GF+ D +
Sbjct: 200 ----------FRRIDGH---PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA--LQLFSNMNVQ 311
N LI Y +C I S+ +F +M + VSW S++ AY + + ++A L L S ++
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 312 PDSATFV-SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
S + S+LSAC+ ++ G + H+ V + + +VD+ G+ G I ++E
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSI-HAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ EMP E + V + L+G G+ +A
Sbjct: 366 QAFDEMP-EKNLVTRNSLIGGYAHQGQVDMA 395
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/626 (34%), Positives = 334/626 (53%), Gaps = 68/626 (10%)
Query: 7 IYATLFHACALHGNIKQAMQL--HEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+++ +F AC QA+ L H D F NHL+ YA G AR L
Sbjct: 47 LFSHIFRAC-------QALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGL 99
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL------------------------L 100
F+ +PKRNV+SW LI GY ++G+ E +LF + L
Sbjct: 100 FERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESL 159
Query: 101 QYFF--------PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMY 148
+FF P+E+ L S+ C D + G+ VHA ++ LD + V ++L +MY
Sbjct: 160 GFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMY 219
Query: 149 SKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
+ C + + N++S N+ I+ A+E F M+
Sbjct: 220 MR-CGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGA--------- 269
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
G+ + TF + +C+ L +H+L K G + + +L+H Y+RCG
Sbjct: 270 ----GVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGC 325
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ S++V + + DLV ++++ AY HG ++A+ LF M +P+ TF++LL A
Sbjct: 326 LGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYA 385
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
CSH+GL EG F M + +G+ P + HY C+VDLLGR G + EAE LI MP++PD V
Sbjct: 386 CSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGV 445
Query: 384 IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
IW LL +C+ + +AE A ++ +L+P DS +V +SNI S + +R+ M+
Sbjct: 446 IWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMR 505
Query: 444 GSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH 503
VRK PG+SW+E++ ++H+F +G + H ++ I + LEE++ +++ GY P+ S+ H
Sbjct: 506 EQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFH 565
Query: 504 DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
D+E+E KE L HHSEKLA+ FA ++ E IR+MKN+R+C DCH +KL S ++
Sbjct: 566 DMEDEEKEVSLAHHSEKLAIAFAFLS----LPEGVPIRVMKNLRVCDDCHVAIKLMSKVI 621
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
G+EIVVRD +RFHHFKD CSC DYW
Sbjct: 622 GREIVVRDVSRFHHFKDGKCSCGDYW 647
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/607 (36%), Positives = 337/607 (55%), Gaps = 71/607 (11%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPN 106
L+ +YA G ARH+FDE+ +NVV + +I Y + ++ ++ ++ Q F P+
Sbjct: 60 LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119
Query: 107 EFSLASVLIS---CDYLH-GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFE 161
++ VL + D L G +H LK LD ++YV N LI MY K EA +V +
Sbjct: 120 MYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD 179
Query: 162 NMEFRNVISWNSMIA----------AFRACKLEAQAI----------------------- 188
+ R+V+SWNSM++ A C+ E +A+
Sbjct: 180 EIPCRDVVSWNSMVSVYAQNGRFNDALELCR-EMEALNLKPNDCTMASLLPAVTNTTSDN 238
Query: 189 -----ELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKA 225
E+F K+ + +EA+ L+ Q++ G+ PD + VL A
Sbjct: 239 VLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPA 298
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
L VH + + ++ NALI YA+CG + ++ VF++M + D+VSW
Sbjct: 299 YGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSW 358
Query: 286 NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
SI+ AY GQ ++A+ +F+ M + PDS FVS+L+ACSHAGL+ +G F+ M E
Sbjct: 359 TSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE 418
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
G+ P+L+H+AC+VDLLGR G+I EA IR+MP+EPD +W LL +CR + +
Sbjct: 419 -CGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGI 477
Query: 403 LAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
LAA KL L P S +V +SNIY +G + IR M+ ++K PG+S +E+ + V
Sbjct: 478 LAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGV 537
Query: 463 HEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLA 522
H F +G HPQ + I+++L+ L+G++K +GY+PET ALHD+EEE KE L HSEKLA
Sbjct: 538 HTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLA 597
Query: 523 LVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRI 582
+ FAI+N + + IR+ KN+R+C DCH KL S + +EI++RD++RFHHF++
Sbjct: 598 VAFAIINT----KPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGC 653
Query: 583 CSCNDYW 589
CSC DYW
Sbjct: 654 CSCGDYW 660
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAA 177
LHGK+++ L+++ V L+ +Y+ +C + A +F+ + +NV+ +N MI +
Sbjct: 40 LHGKVLNDQYLRWNPS----VGIKLMRVYA-ACGEPGLARHIFDEITDKNVVFFNVMIRS 94
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L ++AL +++ + +G PD T+ VLKA + +
Sbjct: 95 YVNNHLY-------------KDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQ 141
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + K G + + + N LI Y +C S+ ++QV D++ D+VSWNS++ YA +G+
Sbjct: 142 IHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGR 201
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+AL+L M N++P+ T SLL A ++
Sbjct: 202 FNDALELCREMEALNLKPNDCTMASLLPAVTNT 234
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+L + N LI+MYAK G L DAR +F++M R+VVSWT++IS Y + G + +F +
Sbjct: 323 NLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMR 382
Query: 101 QYFF-PNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANAL------INMYSKSCA 153
P+ + SVL +C H L+ F+L A + L +++ ++
Sbjct: 383 NSGLNPDSIAFVSVLAACS--HAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGK 440
Query: 154 -DEAWKVFENMEFR-NVISWNSMIAAFR 179
DEA+ M + W +++A R
Sbjct: 441 IDEAYGFIRQMPLEPDERVWGPLLSACR 468
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/555 (38%), Positives = 313/555 (56%), Gaps = 29/555 (5%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V N L+ MY K G + +A+ + MP+ + V+W ALI G+A++ E + + + +
Sbjct: 534 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 593
Query: 102 YFFP-NEFSLASVLISC----DYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
P N ++ SVL +C D L HG +HA + ++ YV N+LI MY+K C D
Sbjct: 594 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK-CGDL 652
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ +F+ + ++ I+WN+M+AA A EEAL +F +++ G+
Sbjct: 653 NSSNYIFDGLGNKSPITWNAMVAAN-------------AHHGCGEEALKIFGEMRNVGVN 699
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D +FS L A A L +H L+ K GFE D + NA + Y +CG + ++
Sbjct: 700 LDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 759
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
+ +SWN ++ A+A HG ++A + F M +PD TFVSLLSAC+H GLV
Sbjct: 760 LPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLV 819
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG + SM GV P ++H C++DLLGR GR+ AE I+EMP+ P+ + W LL
Sbjct: 820 DEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLA 879
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR HG LA A L +L+P D +V SN+ SG + +RKEM + ++K
Sbjct: 880 ACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQ 939
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
P SW++++++VH F G K HPQ I KL EL+ K GYVP+TS ALHD++EE K
Sbjct: 940 PACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQK 999
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E L++HSE+LAL F ++N E S +RI KN+R+C DCH+ K S ++G++IV+R
Sbjct: 1000 EYNLWNHSERLALAFGLINT----PESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLR 1055
Query: 571 DSNRFHHFKDRICSC 585
D RFHHF CSC
Sbjct: 1056 DPYRFHHFSGGKCSC 1070
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 196/372 (52%), Gaps = 37/372 (9%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
+F TN LINMY+KFG ++ AR++FDEM RN SW+ ++SGY + G EE LFC +
Sbjct: 129 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 188
Query: 102 YFF-PNEFSLASVLISCD---YL--HGKLVHALALKFSLDAHVYVANALINMY-SKSCAD 154
PN F +AS++ +C Y+ G VH +K + VYV AL++ Y S
Sbjct: 189 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 248
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A K+FE M NV+SW S++ + + N E L +++++++EG++
Sbjct: 249 NAQKLFEEMPDHNVVSWTSLMVGY-------------SDSGNPGEVLNVYQRMRQEGVSG 295
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ TF+ V +C L + V I +YGFED +AN+LI ++ S+ + VF
Sbjct: 296 NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVF 355
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQ 331
D M D++SWN+++ AYA HG +E+L+ F +++ + +S T SLLS CS ++
Sbjct: 356 DHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLK 415
Query: 332 EGNKVFHSMLENHGVVPQ--LDHYACMVDLL----GRVGRILEAEKLIREMPMEPDSVIW 385
G + HG+V + LD C+ + L GR +AE + + M E D + W
Sbjct: 416 WGRGI-------HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM-TERDLISW 467
Query: 386 SVLLGSCRKHGE 397
+ ++ + G+
Sbjct: 468 NSMMACYVQDGK 479
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 218/430 (50%), Gaps = 31/430 (7%)
Query: 7 IYATLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ A+L AC+ G + + Q+H ++ D++V L++ Y G + +A+ LF
Sbjct: 197 MVASLITACSRSGYMADEGFQVHGFVVKT--GILGDVYVGTALVHFYGSIGLVYNAQKLF 254
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYL 120
+EMP NVVSWT+L+ GY+ GN E ++ + Q N+ + A+V SC D +
Sbjct: 255 EEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQV 314
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G V +++ + V VAN+LI+M+S S +EA VF++M ++ISWN+MI+A+
Sbjct: 315 LGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYA 374
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L +++ F M R L E + T S +L C+ + + +H
Sbjct: 375 HHGLCRESLRCFHWM----------RHLHNE---TNSTTLSSLLSVCSSVDNLKWGRGIH 421
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
L+ K G + + I N L+ Y+ G ++ VF MT DL+SWNS++ Y G+
Sbjct: 422 GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCL 481
Query: 300 EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+ L++ + M + TF S L+ACS+ + E +K+ H+++ G L +
Sbjct: 482 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIE-SKIVHALIIVAGFHDFLIVGNAL 540
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL-EPGD 415
V + G++G ++EA+K+++ MP +PD V W+ L+G H E A K + E G
Sbjct: 541 VTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG---HAENEEPNEAVKAYKLIREKGI 596
Query: 416 SLGFVQMSNI 425
++ M ++
Sbjct: 597 PANYITMVSV 606
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 169/330 (51%), Gaps = 30/330 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+AT+ +C L + Q+ H+I F + + V N LI+M++ F +++A ++FD
Sbjct: 300 FATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS---VSVANSLISMFSSFSSVEEACYVFD 356
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC------DYL 120
M + +++SW A+IS YA HG E R F + NE + ++ D L
Sbjct: 357 HMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH--LHNETNSTTLSSLLSVCSSVDNL 414
Query: 121 H-GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF 178
G+ +H L +K LD++V + N L+ +YS++ +++A VF+ M R++ISWNSM+A +
Sbjct: 415 KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACY 474
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ + ++ L + +L + G + TF+ L AC+ + V
Sbjct: 475 VQ---DGKCLD----------GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIV 521
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+LI GF D ++ NAL+ Y + G + +K+V M D V+WN+++ +A + +
Sbjct: 522 HALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEP 581
Query: 299 KEAL---QLFSNMNVQPDSATFVSLLSACS 325
EA+ +L + + T VS+L ACS
Sbjct: 582 NEAVKAYKLIREKGIPANYITMVSVLGACS 611
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 33/322 (10%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
+K M +H H++ D +V N LI MYAK G L+ + ++FD + ++ ++W A++
Sbjct: 617 LKHGMPIHAHIV--LTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMV 674
Query: 81 SGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYL----HGKLVHALALKFSLD 135
+ A HG EE ++F + ++FS + L + L G+ +H L +K +
Sbjct: 675 AANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFE 734
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+ ++V NA ++MY K C + + K+ R+ +SWN +I+A FA+
Sbjct: 735 SDLHVTNAAMDMYGK-CGEMHDVLKMLPQPINRSRLSWNILISA-------------FAR 780
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDT 251
++A F ++ + G PD TF +L AC GLV E A S+ ++G
Sbjct: 781 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA-YYDSMTREFGVFPGI 839
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYALHGQ---AKEALQLFS 306
+I R G +S ++ +M +DL +W S+L A +HG A++ +
Sbjct: 840 EHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDL-AWRSLLAACRIHGNLELARKTAEHLL 898
Query: 307 NMNVQPDSATFVSLLSACSHAG 328
++ DSA +V + C+ +G
Sbjct: 899 ELDPSDDSA-YVLYSNVCATSG 919
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 139/289 (48%), Gaps = 28/289 (9%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ GK +HA + S++ ++ N LINMYSK + A VF+ M RN SW++M++ +
Sbjct: 111 MAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 170
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHAS 236
L EEA+ LF Q+ G+ P+ + ++ AC +G + +
Sbjct: 171 VRVGL-------------YEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE-GF 216
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH + K G D + AL+H Y G + ++++F++M H++VSW S++ Y+ G
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE---GNKVFHSMLENHGVVPQL 350
E L ++ M V + TF ++ S+C GL+++ G +V +++ +G +
Sbjct: 277 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQ-YGFEDSV 332
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
++ + + EA + M E D + W+ ++ + HG R
Sbjct: 333 SVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHHGLCR 380
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/573 (37%), Positives = 333/573 (58%), Gaps = 28/573 (4%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ CA +G + +A H +I + D+ + N LIN Y+K G+++ AR +FD M +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIR--IDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE 116
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVL----ISCDYLHGKLV 125
R++VSW +I Y ++ E +F + F +EF+++SVL ++CD L K +
Sbjct: 117 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 176
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H L++K +D ++YV AL+++Y+K +A +VFE+M+ ++ ++W+SM+A +
Sbjct: 177 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY------ 230
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ KN EEAL L+R+ QR + + T S V+ AC+ L +H++I K
Sbjct: 231 -------VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 283
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GF + +A++ + YA+CGS+ S +F ++ +L WN+I+ +A H + KE + L
Sbjct: 284 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 343
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M + P+ TF SLLS C H GLV+EG + F M +G+ P + HY+CMVD+LG
Sbjct: 344 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 403
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G + EA +LI+ +P +P + IW LL SCR + LAE+AA KL +LEP ++ V
Sbjct: 404 RAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVL 463
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY + + + RK ++ V+K G SWI+I+++VH F+ G HP+ I
Sbjct: 464 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 523
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L+ L+ + + GY P LHD+E KEE L HSEKLALVF +M E S +R
Sbjct: 524 LDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLM----CLPESSPVR 579
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
IMKN+RICVDCH FMK AS + I+VRD NR
Sbjct: 580 IMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 612
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/589 (38%), Positives = 339/589 (57%), Gaps = 33/589 (5%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
+CA G I Q H I D+ V+N L+ +YA+ L + + +F M +R+
Sbjct: 213 SCASLGCILLGQQTHGEGIK--LGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQ 270
Query: 74 VSWTALISGYAQHG-NAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH-GKL---VHA 127
VSW +I A G + E +F +++ + PN + ++L + L KL +HA
Sbjct: 271 VSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHA 330
Query: 128 LALKFSLDAHVYVANALINMYSKSCADE-AWKVFENM-EFRNVISWNSMIAAFRACKLEA 185
L LK+++ + NAL+ Y KS E ++F M E R+ +SWNSMI+ + +L
Sbjct: 331 LILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLC 390
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+A++L M +QR G D TF+ VL ACA + T VH+ +
Sbjct: 391 KAMDLVWLM------------MQR-GQRLDCFTFATVLSACATVATLECGMEVHACAIRA 437
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
E D VI +AL+ Y++CG I + + F+ M +L SWNS++ YA HG AL+LF
Sbjct: 438 CLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLF 497
Query: 306 SNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
+ M + PD TFV +LSACSH GLV EG + F SM E +G+VP+++HY+CMVDLLGR
Sbjct: 498 TRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGR 557
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSC-RKHG-ETRLAELAATKLKQLEPGDSLGFV 420
G + + E I +MP++P+ +IW +LG+C R +G +T L AA L ++P +++ +V
Sbjct: 558 AGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYV 617
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SN+Y G + R+ M+ + V+K G SW+ +++ VH F +G HP++ I+
Sbjct: 618 LLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYA 677
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
KL+EL +++ GYVP+ AL+D+E E+KEE L +HSEKLA+ F + L I
Sbjct: 678 KLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAFVLTRNSGL-----PI 732
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RIMKN+R+C DCH+ K S ++ + IV+RDSNRFHHF+D CSC DYW
Sbjct: 733 RIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 175/363 (48%), Gaps = 28/363 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEE-CFRLFCS 98
DLF+ N LIN+Y + G AR LFDEMP RN V+W LISGY Q+G E+ C L
Sbjct: 33 SDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEM 92
Query: 99 LLQYFFPNEFSLASVLISCD-----YLHGKLVHALALKFSL-DAHVYVANALINMYSKSC 152
+ + F PN F+ S + +C G+ VH A++ L DA V V N LINMY+K C
Sbjct: 93 IFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAK-C 151
Query: 153 A--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D A VF M ++ +SWNSMI + K E+A+ + +++
Sbjct: 152 GDIDHARSVFGLMVDKDSVSWNSMITGLD-------------QNKCFEDAVKSYNSMRKT 198
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ P L +CA L H K G + D ++N L+ YA ++
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAEC 258
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQA-KEALQLFSNM---NVQPDSATFVSLLSACSH 326
++VF M D VSWN+++ A A G + EA+++F M P+ TF++LL+ S
Sbjct: 259 QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSS 318
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+ +++ H+++ + V ++ G+ G + E++ M D V W+
Sbjct: 319 LSTSKLSHQI-HALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWN 377
Query: 387 VLL 389
++
Sbjct: 378 SMI 380
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 148/321 (46%), Gaps = 24/321 (7%)
Query: 124 LVHALALKFSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
L H LK D+ +++ N LIN+Y + C A K+F+ M RN ++W +I+ +
Sbjct: 21 LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCV-SARKLFDEMPDRNGVTWACLISGYTQN 79
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA-GLVTERHASAVHS 240
+ E+A + +++ EG P+ F ++AC ++ R VH
Sbjct: 80 GM-------------PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHG 126
Query: 241 LIAKYGFEDDTV-IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ G D V + N LI+ YA+CG I ++ VF M D VSWNS++ + +
Sbjct: 127 YAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFE 186
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+A++ +++M + P + +S LS+C+ G + G + H G+ + +
Sbjct: 187 DAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQT-HGEGIKLGLDMDVSVSNTL 245
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
+ L R+ E +K+ M +E D V W+ ++G+ G + ++E L+ + G S
Sbjct: 246 LALYAETSRLAECQKVFSWM-LERDQVSWNTVIGALADSGAS-VSEAIEVFLEMMRAGWS 303
Query: 417 LGFVQMSNIYCLSGSFNKARL 437
V N+ S + ++L
Sbjct: 304 PNRVTFINLLATVSSLSTSKL 324
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+AT+ ACA ++ M++H I D+ + + L++MY+K G +D A F+
Sbjct: 411 FATVLSACATVATLECGMEVHACAIR--ACLESDVVIGSALVDMYSKCGRIDYASRFFNL 468
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL 120
MP RN+ SW ++ISGYA+HG+ + RLF + L P+ + VL +C ++
Sbjct: 469 MPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHI 522
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
A+ H + K+GF+ D + N LI+ Y R G ++++FD+M + V+W ++ Y
Sbjct: 19 ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78
Query: 295 HGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV-VPQL 350
+G ++A + M + P+ F S + AC + L + + H G+ ++
Sbjct: 79 NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++++ + G I A + M ++ DSV W+ ++
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLM-VDKDSVSWNSMI 176
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/630 (36%), Positives = 349/630 (55%), Gaps = 67/630 (10%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L + + L +CA K+ Q+H H++ D++V LI+MYA+ G L+D
Sbjct: 85 LLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLK--LGFDLDIYVHTSLISMYAQNGRLED 142
Query: 61 ARH-------------------------------LFDEMPKRNVVSWTALISGYAQHGNA 89
AR LFDE+P ++VVSW A+ISGY + GN
Sbjct: 143 ARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNY 202
Query: 90 EECFRLFCSLLQY--FFPNEFSLASVLISC---DYLH-GKLVHALALKFSLDAHVYVANA 143
+E LF ++ P+E ++ +V+ +C D + G+ VH+ +++ + NA
Sbjct: 203 KEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNA 262
Query: 144 LINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
LI++YSK + A ++F+ + ++VISWN++I + M +EAL
Sbjct: 263 LIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGY-------------THMNLYKEALL 309
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY---GFEDDTVIANALIH 259
LF+++ R G P+ T +L ACA L +H I K + + + +LI
Sbjct: 310 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLID 369
Query: 260 AYARCGSISLSKQVFDK-MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
YA+CG I ++QVFD M+ L +WN+++ +A+HG+A A +FS M ++PD
Sbjct: 370 MYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDI 429
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TFV LLSACSH+G++ G +F SM + + P+L+HY CM+DLLG G EAE++I
Sbjct: 430 TFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINT 489
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MPMEPD VIW LL +C+ HG L E A KL ++EPG+S +V +SNIY +G +N+
Sbjct: 490 MPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEV 549
Query: 436 RLIRKEM--KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
IR + KG + +K PG S IEI++ VHEF G K HPQ I+ LEE+ L+ G
Sbjct: 550 AKIRALLNDKGMK-KKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAG 608
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
+VP+TS L ++EEE +E L HHSEKLA+ F +++ + + + IMKN+R+C +CH
Sbjct: 609 FVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLIS----TKPGTKLTIMKNLRVCKNCH 664
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRIC 583
KL S + +EI+ RD RF HF+D +C
Sbjct: 665 EATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 191/415 (46%), Gaps = 35/415 (8%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCD- 118
A +FD + + N++ W + G+A + +L+ ++ P+ ++ +L SC
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 119 ---YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
G+ +H LK D +YV +LI+MY+++ ++A KVF+ R+V+S+ ++
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 175 IAAFRACKLEAQAIELFAKMK------------------NEEEALFLFRQ-LQREGMAPD 215
IA + + A +LF ++ N +EAL LF++ + + PD
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T V+ ACA + VHS I +GF + I NALI Y++ G + + ++FD
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+ D++SWN+++ Y KEAL LF M P+ T +S+L AC+H G +
Sbjct: 282 GLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 341
Query: 333 GNKVFHSMLEN--HGVVPQLDHY-ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
G + H + GVV + ++D+ + G I A+++ W+ ++
Sbjct: 342 G-RWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMI 400
Query: 390 GSCRKHGETRLA--ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
HG A + ++ +EP D + FV + + SG + R I + M
Sbjct: 401 SGFAMHGRANAAFDIFSRMRMNGIEP-DDITFVGLLSACSHSGMLDLGRNIFRSM 454
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/593 (36%), Positives = 324/593 (54%), Gaps = 30/593 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I L A L ++ QLH + P+ +T+ L+++YAK G L A+ +FD
Sbjct: 528 IPIALKSASRLPHPLRAGEQLHARSLK-LPSHTNPHVLTS-LLSLYAKCGLLHRAQRVFD 585
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISC----DYLH 121
EMP + V WTALI+ Y G+ E + + P+ F+ VL +C D
Sbjct: 586 EMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLAT 645
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ V A + + V+VA A +++Y K C + +A +VF+ M ++ ++W +M+ +
Sbjct: 646 GETVWRAAEQEGVAQSVFVATAAVDLYVK-CGEMAKAREVFDKMRHKDAVAWGAMVGGY- 703
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A + EAL LF +Q EGM PD + L AC L
Sbjct: 704 ------------ASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAI 751
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
++ F D+ V+ ALI YA+CGS + VF +M D++ WN+++ + G K
Sbjct: 752 RMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEK 811
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
A L M V+ + TF+ LL +C+H GL+Q+G + FH+M + + + P+++HY CM
Sbjct: 812 IAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCM 871
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLL R G + EA +L+ +MPM ++VI LLG C+ H T LAE +L LEP +S
Sbjct: 872 VDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNS 931
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SNIY G + A +R +MK V K P SW+E E +VHEF G K HP +
Sbjct: 932 GNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSD 991
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+KKL+EL ++K MGY P T + + D+E+E KE L HHSEKLA+ F ++ G
Sbjct: 992 QIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGP---- 1047
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH +KL S + +EI+VRD+NRFH F+D CSCNDYW
Sbjct: 1048 GETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 332/560 (59%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFD--EMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N LI +YAK L AR +F+ +P+R +VSWTA++S YAQ+G E +F
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 99 LLQY-FFPNEFSLASVL--ISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ + P+ +L SVL +C D G+ +HA +K L+ + +L MY+K
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 154 DEAWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
K+ F+ M+ N+I WN+MI+ + +AI++F +M N++ +
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-------------V 319
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD + + + ACA + + A +++ + + + DD I++ALI +A+CGS+ ++
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD+ D+V W++++ Y LHG+A+EA+ L+ M V P+ TF+ LL AC+H+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+EG F+ M +H + PQ HYAC++DLLGR G + +A ++I+ MP++P +W LL
Sbjct: 440 VREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+C+KH L E AA +L ++P ++ +VQ+SN+Y + +++ +R MK + K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SW+E+ R+ F G K HP+ E I +++E + +LK G+V +LHD+ +E
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEE 618
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
EE L HSE++A+ + +++ + + +RI KN+R CV+CH KL S L+ +EIVV
Sbjct: 619 AEETLCSHSERIAIAYGLISTP----QGTPLRITKNLRACVNCHAATKLISKLVDREIVV 674
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFKD +CSC DYW
Sbjct: 675 RDTNRFHHFKDGVCSCGDYW 694
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 210/418 (50%), Gaps = 45/418 (10%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFGYL 58
+HS YA+L + +KQ +H ++ F F+ LI+ + FG +
Sbjct: 18 IHSDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSG-----FLITKLIHASSSFGDI 69
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC 117
AR +FD++P+ + W A+I GY+++ + ++ ++ ++ L P+ F+ +L +C
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 118 DYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEF--RNVI 169
L G+ VHA + DA V+V N LI +Y+K C A VFE + R ++
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIV 188
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SW ++++A +A+ EAL +F Q+++ + PDW VL A L
Sbjct: 189 SWTAIVSA-------------YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+ ++H+ + K G E + + +L YA+CG ++ +K +FDKM +L+ WN+++
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA +G A+EA+ +F M +V+PD+ + S +SAC+ G +++ SM E G
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA----RSMYEYVGR 351
Query: 347 VPQLDHY---ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D + ++D+ + G + E +L+ + ++ D V+WS ++ HG R A
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/617 (36%), Positives = 344/617 (55%), Gaps = 50/617 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL--FDE 67
++ H C L IKQ +H H+I N Q +V LI M K + L F +
Sbjct: 47 SILHDCTLFSQIKQ---VHAHIIRN--GLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQ 101
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----DYLHG 122
+ N WTA+I GYA G E + + + P F+ +++ +C + G
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 123 KLVHALALKFS-LDAHVYVANALINMYSK----SCADEAWKVFENMEFRNVISWNSMIAA 177
K VHA + + +YV N++I++Y K CA KVF+ M R+V+SW +I A
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCAR---KVFDEMSERDVVSWTELIVA 218
Query: 178 FRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTF 219
+ A LF + +++ EAL F+++Q GM D T
Sbjct: 219 YAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTL 278
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGF--EDDTVIANALIHAYARCGSISLSKQVFDKM 277
+ V+ ACA L +HA+ + + + GF + V+ +ALI Y++CGS + +VF+ M
Sbjct: 279 AGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
++ S++S++ YA+HG+A ALQLF +M ++P+ TF+ +LSACSHAGLV++G
Sbjct: 339 KERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR 398
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F M + GV P DHYACMVDLLGR G + EA L++ MPMEP+ +W LLG+CR
Sbjct: 399 QLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRI 458
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG +A++AA +L +LEP ++ +SNIY +G + + +RK ++ +K PG S
Sbjct: 459 HGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCS 518
Query: 455 WIEIEN-RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
W E +N +H+F +G HP+ I + L++LI +L+ GY P A +D+ ++ KE
Sbjct: 519 WFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERI 578
Query: 514 LYHHSEKLALVFAIMNQGSLCRERS-VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
L HSEKLAL + G LC E I+IMKNIRIC DCHN M AS++ G+EI+VRD+
Sbjct: 579 LMSHSEKLALAY-----GLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDN 633
Query: 573 NRFHHFKDRICSCNDYW 589
RFHHF + CSC ++W
Sbjct: 634 MRFHHFHNGTCSCGNFW 650
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 320/579 (55%), Gaps = 30/579 (5%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
++ QLH + P+ +T+ L+++YAK G L A+ +FDEMP + V WTALI
Sbjct: 566 LRAGEQLHARSLK-LPSHTNPHVLTS-LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALI 623
Query: 81 SGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLD 135
+ Y G+ E + + P+ F+ VL +C D G+ V A + +
Sbjct: 624 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 683
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V+VA A +++Y K C + +A +VF+ M ++ ++W +M+ + A
Sbjct: 684 QSVFVATAAVDLYVK-CGEMAKAREVFDKMRHKDAVAWGAMVGGY-------------AS 729
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+ EAL LF +Q EGM PD + L AC L ++ F D+ V+
Sbjct: 730 NGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVL 789
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
ALI YA+CGS + VF +M D++ WN+++ + G K A L M V
Sbjct: 790 GTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGV 849
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+ + TF+ LL +C+H GL+Q+G + FH+M + + + P+++HY CMVDLL R G + EA
Sbjct: 850 KLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAH 909
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+L+ +MPM ++VI LLG C+ H T LAE +L LEP +S +V +SNIY G
Sbjct: 910 QLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRG 969
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ A +R +MK V K P SW+E E +VHEF G K HP + I+KKL+EL ++K
Sbjct: 970 RWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMK 1029
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
MGY P T + + D+E+E KE L HHSEKLA+ F ++ G IR+ KN+R+C
Sbjct: 1030 TMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGP----GETIRVTKNLRVCS 1085
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +KL S + +EI+VRD+NRFH F+D CSCNDYW
Sbjct: 1086 DCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/566 (37%), Positives = 326/566 (57%), Gaps = 34/566 (6%)
Query: 41 DLFVTNHLINMYAKFG-YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+ N LI+ ++ +L AR LFD MP+R+ +W+AL+SGY +HG E L+ +
Sbjct: 93 DICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRM 152
Query: 100 LQY----FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDA---HVYVANALINMY 148
+ NEF+ +S L + G+ +H ++ +DA + +AL +MY
Sbjct: 153 QEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMY 212
Query: 149 SKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
+K C D+A +VF+ M R+ +SW +M+ + + LF M
Sbjct: 213 AK-CGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHM------------ 259
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
L+ G+ P+ T++ VL+ACA E VH +AK G D +AL+ Y++CG
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ---LFSNMNVQPDSATFVSLLSA 323
+ + +VF+ M DLVSW +++ YA +GQ +EAL+ +F ++PD TFV +LSA
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSA 379
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C+HAGLV +G ++FHS+ E + + DHYAC++DLL R G+ AEK+I M ++P+
Sbjct: 380 CAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKF 439
Query: 384 IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+W+ LLG CR H LA AA L ++EP + +V ++NIY G F++ +R+ M+
Sbjct: 440 LWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIME 499
Query: 444 GSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH 503
+ K P SWIE+ RVH F G K HP+ + I+ L++L ++ GYV + LH
Sbjct: 500 SKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLH 559
Query: 504 DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
D+E+E KE+ + +HSE+LA+ F I+ E S I++ KN+RIC DCH +KL S ++
Sbjct: 560 DVEDEQKEQDIGYHSERLAVAFGIIATP----EGSPIKVFKNLRICGDCHAAIKLISQIV 615
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
++I+VRDSNRFHHFKD ICSC DYW
Sbjct: 616 QRDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 163/342 (47%), Gaps = 34/342 (9%)
Query: 22 KQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
+ +LH H++ D + + L +MYAK G +DDAR +FD MP R+ VSWTA++
Sbjct: 181 RAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMV 240
Query: 81 SGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL----HGKLVHALALKFSL 134
Y G E FRLF +L+ PNEF+ A VL +C G+ VH K
Sbjct: 241 ERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGT 300
Query: 135 DAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ +AL+ MYSK C D A +VFE M +++SW ++I+ +A
Sbjct: 301 GDSCFAESALLRMYSK-CGDMGSAVRVFEAMAKPDLVSWTAVISG-------------YA 346
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDD 250
+ EEAL F R G+ PD TF VL AC AGLV ++ HS+ +Y E
Sbjct: 347 QNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLV-DKGLEIFHSIKEQYCIEHT 405
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALH---GQAKEALQLFS 306
+I +R G ++++ M + W S+L +H G A+ A +
Sbjct: 406 ADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEAL- 464
Query: 307 NMNVQPDS-ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
++P++ AT+V+L + + GL E V ++E+ G+
Sbjct: 465 -FEIEPENPATYVTLANIYASVGLFDEVEDV-RRIMESKGIT 504
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 330/598 (55%), Gaps = 39/598 (6%)
Query: 24 AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
AM + + P + + T +I Y + L+ AR +F+ M + +W A+ISGY
Sbjct: 207 AMVSARKLFDEMPKRDELTWTT--MITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264
Query: 84 AQHGNAEECFRLFCSLLQYFFP--NEFSLASVLISC----DYLHGKLVHALALKFSLDAH 137
G +E L C +++ ++ + +++ +C + GK VHA LK L+ +
Sbjct: 265 VHCGCFQEALTL-CRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPN 323
Query: 138 ----VYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ V+NALI +Y K+ DEA K+F M RN+I+WN++++ + +A F
Sbjct: 324 HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFE 383
Query: 193 KM--KN----------------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+M KN +E L LF+Q++ +G P F+ L AC+ L +
Sbjct: 384 EMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALEN 443
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ + G+E + NA+I YA+CG + ++ VF M DLVSWNS++ A
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG +A++LF M V PD TF+++L+ACSHAGLV++G F+SMLE++G+ P D
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCED 563
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYA MVDL R G A +I MP +P + +W LL CR HG L AA +L +L
Sbjct: 564 HYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKL 623
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
P + +V +SNIY G +N+ +RK M+ VRK P SWIE+EN+VH F
Sbjct: 624 MPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDV 683
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP+ ++++ LE+L ++K +GY+P+T LHD+E E KE L HSEKLA+ F IM
Sbjct: 684 HPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMK-- 741
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R+ KNIRIC DCHN K S + +EI+VRD RFHHFK+ CSC DYW
Sbjct: 742 --LPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 173/375 (46%), Gaps = 62/375 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y T+ ACA G+ + Q+H +++ N PN L V+N LI +Y K +D+AR +F
Sbjct: 292 YTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351
Query: 66 DEMPKRNVVSWTALISGY-------------------------------AQHGNAEECFR 94
MP RN+++W A++SGY AQ+G +E +
Sbjct: 352 YAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLK 411
Query: 95 LFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYS 149
LF + L F P +F+ A L +C L +G+ +HA + ++ + V NA+I+MY+
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471
Query: 150 KSCADEAWK-VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
K EA + VF M +++SWNSMIAA +AIE LF Q+
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIE-------------LFDQML 518
Query: 209 REGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+EG+ PD TF VL AC AGLV E+ +S++ YG ++ + R G
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLV-EKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGM 577
Query: 267 ISLSKQVFDKMTYHDLVS-WNSILKAYALHGQA----KEALQLFSNMNVQPDSATFVSLL 321
S ++ V D M W ++L +HG + A QLF M + T+V L
Sbjct: 578 FSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM--PQNDGTYVLLS 635
Query: 322 SACSHAGLVQEGNKV 336
+ + G E KV
Sbjct: 636 NIYADVGRWNEVAKV 650
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 205/492 (41%), Gaps = 83/492 (16%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWT 77
N+ A QL E + N D LI Y G L+ R +F+ P R+ V +
Sbjct: 63 NLVYARQLFEEIPN------PDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYN 116
Query: 78 ALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHGK-----LVHALALK 131
A+I+GYA +G+ LF ++ + F P++F+ SVL + G +H +K
Sbjct: 117 AMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVK 176
Query: 132 FSLD-AHVYVANALINMYSK-------SCAD--EAWKVFENMEFRNVISWNSMIAAFRAC 181
+ V NAL+++Y K SC+ A K+F+ M R+ ++W +MI +
Sbjct: 177 TGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRN 236
Query: 182 KLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVL 223
A E+F M +EAL L R+++ G+ D T++ ++
Sbjct: 237 DDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTII 296
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDD----TVIANALIHAYARCGSISLSKQVFDKMTY 279
ACA + + + VH+ I K + ++NALI Y + + ++++F M
Sbjct: 297 SACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPV 356
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMNV----------------------------- 310
++++WN+IL Y G+ +EA F M V
Sbjct: 357 RNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQM 416
Query: 311 -----QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
+P F L+ACS G ++ G ++ H+ L + G L M+ + + G
Sbjct: 417 RLDGFEPCDFAFAGALTACSVLGALENGRQL-HAQLVHLGYESSLSVGNAMISMYAKCGV 475
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE-TRLAELAATKLKQLEPGDSLGFVQMSN 424
+ AE + MP D V W+ ++ + +HG + EL LK+ D + F+ +
Sbjct: 476 VEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534
Query: 425 IYCLSGSFNKAR 436
+G K R
Sbjct: 535 ACSHAGLVEKGR 546
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 86/356 (24%)
Query: 105 PNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENM 163
P FSLA + VHA + + N L+ MY KS A ++FE +
Sbjct: 26 PASFSLA-----------RAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEI 74
Query: 164 EFRNVISWNSMIAAF--------------------RACKLEAQAIELFAKMKNEEEALFL 203
+ I+ ++I A+ R I +A + AL L
Sbjct: 75 PNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALEL 134
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLV-TERHASAVHSLIAKYGFE-DDTVIANALIHAY 261
FR ++R+ PD TF+ VL A V E+ +H + K G + + NAL+ Y
Sbjct: 135 FRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVY 194
Query: 262 AR--------CGSISLSKQVFDKMTYHDLVSWNSILKAYALH------------------ 295
+ C ++ ++++FD+M D ++W +++ Y +
Sbjct: 195 VKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLG 254
Query: 296 -------------GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
G +EAL L M +Q D T+ +++SAC++ G Q G +V
Sbjct: 255 AAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAY 314
Query: 340 MLENHGVVPQLDHYAC------MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+L+N + P +H C ++ L + ++ EA K+ MP+ + + W+ +L
Sbjct: 315 ILKNE-LNP--NHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAIL 366
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/600 (36%), Positives = 351/600 (58%), Gaps = 31/600 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F S +A + A +I+ Q+H ++ N ++FV N L++ Y+K + +
Sbjct: 236 FRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVK--CNFVWNVFVANALLDFYSKHDRIVE 293
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVL-ISCD 118
AR LF EMP+ + +S+ LI+ A +G EE LF L F +F A++L I+ +
Sbjct: 294 ARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAAN 353
Query: 119 YLH---GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
L+ G+ +H+ A+ + V V N+L++MY+K C EA ++F ++ ++ + W +
Sbjct: 354 SLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAK-CDKFGEANRIFADLAHQSSVPWTA 412
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I+ + L E+ L LF ++ R + D T++ +L+ACA L +
Sbjct: 413 LISGYVQKGLH-------------EDGLKLFVEMHRAKIGADSATYASILRACANLASLT 459
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+HS I + G + +AL+ YA+CGSI + Q+F +M + VSWN+++ AYA
Sbjct: 460 LGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYA 519
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G AL+ F M +QP+S +F+S+L ACSH GLV+EG + F+SM + + + P+
Sbjct: 520 QNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRR 579
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HYA MVD+L R GR EAEKL+ MP EPD ++WS +L SCR H LA AA +L
Sbjct: 580 EHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFN 639
Query: 411 LEP-GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
++ D+ +V MSNIY +G ++ ++K ++ +RK P SW+EI+ + H F++
Sbjct: 640 MKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSAND 699
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
HPQ + I +KL+EL Q++ GY P+++ ALH+++EE K E L +HSE++A+ FA+++
Sbjct: 700 TSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALIS 759
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ S I +MKN+R C DCH +K+ S ++ +EI VRDS+RFHHF D CSC DYW
Sbjct: 760 TP----KGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 187/387 (48%), Gaps = 30/387 (7%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A +L + M + +++ TN +I Y K G L AR LFD M +R+VV+WT
Sbjct: 56 GDLGAARKLFDEMPH------KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTM 109
Query: 79 LISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHG----KLVHALALKFS 133
LI GYAQH E F LF + ++ P+ +LA++L VH +K
Sbjct: 110 LIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVG 169
Query: 134 LDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
D+ + V N+L++ Y K+ + A +F++M ++ +++N+++ + AI LF
Sbjct: 170 YDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFF 229
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
KM Q G P TF+ VL A + VHS + K F +
Sbjct: 230 KM-------------QDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVF 276
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN--- 309
+ANAL+ Y++ I ++++F +M D +S+N ++ A +G+ +E+L+LF +
Sbjct: 277 VANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTR 336
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
F +LLS +++ ++ G ++ HS + ++ +VD+ + + EA
Sbjct: 337 FDRRQFPFATLLSIAANSLNLEMGRQI-HSQAIVTDAISEVLVGNSLVDMYAKCDKFGEA 395
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ ++ + SV W+ L+ + G
Sbjct: 396 NRIFADLAHQ-SSVPWTALISGYVQKG 421
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+RH V + + K GF+ +T N + + + G + ++++FD+M + +++S N+++
Sbjct: 23 KRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMG 82
Query: 292 YALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
Y G A LF +M VQ T+ L+ + E +F M HG+VP D
Sbjct: 83 YLKSGNLSTARSLFDSM-VQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCR-HGMVP--D 138
Query: 352 HYACMVDLLG-----RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
H L G V + + + ++ + ++ + LL S + +TR LA
Sbjct: 139 HITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDS---YCKTRSLGLACH 195
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFN 433
K + D++ F + Y G FN
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEG-FN 221
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/631 (35%), Positives = 334/631 (52%), Gaps = 75/631 (11%)
Query: 15 CALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVV 74
CA G Q H + + Q++FV N L++MYAKFG +D+A +F MP ++VV
Sbjct: 239 CASVGTRSLGKQFHGFAVTS--EMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVV 296
Query: 75 SWTALISGYAQHGNAEECFRLFCSL-----------------------LQY--------- 102
SW A+++GY+Q G E+ RLF + L Y
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 103 ----FFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHV-------YVANALINM 147
PNE +L SVL C +HGK +H A+K+ +D V N LI+M
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDM 416
Query: 148 YSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
Y+K D A +F+++ + R+V++W MI + +A+EL ++M E+
Sbjct: 417 YAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ---- 472
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV---IANALIHAY 261
P+ T S L ACA L +H+ + + + V ++N LI Y
Sbjct: 473 -------TRPNAFTISCALVACASLAALSIGKQIHAYALRN--QQNAVPLFVSNCLIDMY 523
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
A+CG I ++ VFD M + V+W S++ Y +HG +EAL +F M + D T +
Sbjct: 524 AKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLL 583
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+L ACSH+G++ +G + F+ M + GV P +HYAC+VDLLGR GR+ A +LI EMPM
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
EP V+W LL CR HG+ L E AA K+ +L + + +SN+Y +G + I
Sbjct: 644 EPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRI 703
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
R M+ ++K PG SW+E F G K HP + I++ L + + ++K +GYVPET
Sbjct: 704 RSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPET 763
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
ALHD+++E K++ L+ HSEKLAL + I+ + + IRI KN+R+C DCH
Sbjct: 764 GFALHDVDDEEKDDLLFEHSEKLALAYGILTT----PQGAAIRITKNLRVCGDCHTAFTY 819
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++ EI++RDS+RFHHFK+ +CSC YW
Sbjct: 820 MSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 208/432 (48%), Gaps = 46/432 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +F AC +++ H ++ ++FV N L+ MY++ G L DAR +FDE
Sbjct: 130 FPFVFKACGEISSVRCGDS--SHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDE 187
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYLH---- 121
MP +VVSW ++I YA+ G + +F + F P++ +L +VL C +
Sbjct: 188 MPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSL 247
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK H A+ + +++V N L++MY+K DEA VF NM ++V+SWN+M+A +
Sbjct: 248 GKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQ 307
Query: 181 CKLEAQAIELFAKMKNEE----------------------EALFLFRQLQREGMAPDWCT 218
A+ LF +M+ E+ EAL + RQ+ G+ P+ T
Sbjct: 308 IGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKY-------GFEDDTVIANALIHAYARCGSISLSK 271
VL CA + H +H KY G D+ ++ N LI YA+C + +++
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIAR 427
Query: 272 QVFDKMTY--HDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSAC 324
+FD ++ D+V+W ++ Y+ HG A +AL+L S M +P++ T L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ + G ++ L N L C++D+ + G I +A +L+ + ME + V
Sbjct: 488 ASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDA-RLVFDNMMEKNEVT 546
Query: 385 WSVLLGSCRKHG 396
W+ L+ HG
Sbjct: 547 WTSLMTGYGMHG 558
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 194/455 (42%), Gaps = 83/455 (18%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+I H C I Q +H+ +++ L +T+HLI+ Y G L A L
Sbjct: 29 EITPPFIHKCK---TISQVKLIHQKLLSF---GILTLNLTSHLISTYISLGCLSHAVSLL 82
Query: 66 DEMPKRN--VVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH- 121
P + V W +LI Y +G A +C FC + + P+ ++ V +C +
Sbjct: 83 RRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISS 142
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAA 177
G HAL+ ++V+V NAL+ MYS+ + +A KVF+ M +V+SWNS+I +
Sbjct: 143 VRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIES 202
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ A+E+F+KM NE F FR PD T VL CA + T
Sbjct: 203 YAKLGKPKMALEMFSKMTNE----FGFR--------PDDITLVNVLPPCASVGTRSLGKQ 250
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H + + N L+ YA+ G + + VF M D+VSWN+++ Y+ G+
Sbjct: 251 FHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGR 310
Query: 298 AKEALQLFSNM--------------------------------------NVQPDSATFVS 319
++A++LF M ++P+ T +S
Sbjct: 311 FEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 320 LLSACSHAGLVQEGNKVFHSMLE--------NHG----VVPQLDHYACMVDLLGRVGRIL 367
+LS C+ G + G ++ ++ HG V+ QL +D+ + ++
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQL------IDMYAKCKKVD 424
Query: 368 EAEKLIREM-PMEPDSVIWSVLLGSCRKHGETRLA 401
A + + P E D V W+V++G +HG+ A
Sbjct: 425 IARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 108 FSLASVLISCDYLHG-------KLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKV 159
FS +++ I+ ++H KL+H L F + + + + LI+ Y S C A +
Sbjct: 23 FSTSALEITPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSL 81
Query: 160 FENMEFRN--VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+ V WNS+I ++ + L F + PD
Sbjct: 82 LRRFPPSDAGVYHWNSLIRSY-------------GNNGRANKCLSSFCLMHSLSWTPDNY 128
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
TF V KAC + + R + H+L GF + + NAL+ Y+RCGS+S +++VFD+M
Sbjct: 129 TFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEM 188
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEG 333
D+VSWNSI+++YA G+ K AL++FS M +PD T V++L C+ G G
Sbjct: 189 PVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLG 248
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K FH ++ + C+VD+ + G + EA + MP++ D V W+ ++
Sbjct: 249 -KQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSWNAMVAGYS 306
Query: 394 KHGE 397
+ G
Sbjct: 307 QIGR 310
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 326/558 (58%), Gaps = 27/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV N L++MYAKFG + AR +FD++ R VVSWT++ISGY Q+G+ E +F +
Sbjct: 119 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 178
Query: 101 Q-YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
Q P+ +L SV+ + D GK +H L K L+ + +L MY+K E
Sbjct: 179 QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 238
Query: 156 AWKVFEN-MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ F N ME N+I WN+MI+ + A EEA+ LFR++ + +
Sbjct: 239 VARFFFNRMEKPNLILWNAMISGY-------------ANNGYGEEAIKLFREMITKNIRV 285
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T + A A + + A + I+K + DDT + LI YA+CGSI L++ VF
Sbjct: 286 DSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVF 345
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D++ D+V W+ ++ Y LHG +EA+ L++ M V P+ TF+ LL+AC ++GLV+
Sbjct: 346 DRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVK 405
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG ++FH ++ +HG+ P HY+C+VDLLGR G + +A I MP++P +W LL +
Sbjct: 406 EGWELFH-LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 464
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ H + RL E+AA +L L+P ++ +VQ+SN+Y + + + +R M + K
Sbjct: 465 CKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDL 524
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S IEI + F G + HP+ + IF++L+ L +LK GYVP LHD+ E E
Sbjct: 525 GHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIE 584
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E L HHSE+LA+ + I++ + +RI KN+R C++CH+ +KL S L+ +EI++RD
Sbjct: 585 ETLCHHSERLAVAYGIISTAP----GTTLRITKNLRACINCHSAIKLISKLVDREIIIRD 640
Query: 572 SNRFHHFKDRICSCNDYW 589
+ RFHHFKD +CSC D+W
Sbjct: 641 AKRFHHFKDGVCSCGDFW 658
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 179/377 (47%), Gaps = 24/377 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
F+ IN FG ++ A F E+ + +++ W A+I GY Q + R++ + +
Sbjct: 20 FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 79
Query: 102 YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
PN F+ VL +C GK +H K+ ++V+V N+L++MY+K A
Sbjct: 80 QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 139
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
VF+ + R V+SW S+I+ + + + EAL +F+++++ + PDW
Sbjct: 140 RIVFDKLHDRTVVSWTSIISG-------------YVQNGDPMEALNVFKEMRQCNVKPDW 186
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
V+ A + ++H L+ K G E + I +L YA+ G + +++ F++
Sbjct: 187 IALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNR 246
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M +L+ WN+++ YA +G +EA++LF M N++ DS T S + A + G + E
Sbjct: 247 MEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL-EL 305
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ + ++D+ + G I A + + + + D V+WSV++
Sbjct: 306 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA-RCVFDRVADKDVVLWSVMIMGYG 364
Query: 394 KHGETRLAELAATKLKQ 410
HG + A ++KQ
Sbjct: 365 LHGHGQEAICLYNEMKQ 381
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+H V+ + G + I+A G ++ + + F +++ D++ WN+I+K Y
Sbjct: 1 KHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 60
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG-NKVFHSMLENHGVVP 348
++++ +M V P+ TF+ +L AC G EG K H +G
Sbjct: 61 TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKAC--GGTSVEGIGKQIHGQTFKYGFGS 118
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ +V + + G+I A +++ + + V W+ ++ ++G+
Sbjct: 119 NVFVQNSLVSMYAKFGQISYA-RIVFDKLHDRTVVSWTSIISGYVQNGD 166
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/617 (36%), Positives = 347/617 (56%), Gaps = 50/617 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL--FDE 67
++ H C L IKQ +H H+I N Q +V LI M K + L F +
Sbjct: 47 SILHDCTLFSQIKQ---VHAHIIRN--GLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQ 101
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----DYLHG 122
+ N WTA+I GYA G E + + + P F+ +++ +C + G
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 123 KLVHALALKFS-LDAHVYVANALINMYSK----SCADEAWKVFENMEFRNVISWNSMIAA 177
K VHA + + +YV N++I++Y K CA KVF+ M R+V+SW +I A
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCAR---KVFDEMSERDVVSWTELIVA 218
Query: 178 F-RACKLEAQA-----------------IELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
+ + +E+ + + +A+ +EAL F+++Q GM D T
Sbjct: 219 YAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTL 278
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGF--EDDTVIANALIHAYARCGSISLSKQVFDKM 277
+ V+ ACA L +HA+ + + + GF + V+ +ALI Y++CGS + +VF+ M
Sbjct: 279 AGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
++ S++S++ YA+HG+A ALQLF +M ++P+ TF+ +LSACSHAGLV++G
Sbjct: 339 KERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR 398
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F M + GV P DHYACMVDLLGR G + EA L++ MPMEP+ +W LLG+CR
Sbjct: 399 QLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRI 458
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG +A++AA +L +LEP ++ +SNIY +G + + +RK ++ +K PG S
Sbjct: 459 HGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCS 518
Query: 455 WIEIEN-RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
W E +N +H+F +G HP+ I + L++LI +L+ GY P A +D+ ++ KE
Sbjct: 519 WFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERI 578
Query: 514 LYHHSEKLALVFAIMNQGSLCRERS-VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
L HSEKLAL + G LC E I+IMKNIRIC DCHN M AS++ G+EI+VRD+
Sbjct: 579 LMSHSEKLALAY-----GLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDN 633
Query: 573 NRFHHFKDRICSCNDYW 589
RFHHF + CSC ++W
Sbjct: 634 MRFHHFHNGTCSCGNFW 650
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 329/559 (58%), Gaps = 29/559 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV N L+ +YAK G ++ AR +F+ + RN+VSWT++ISGY Q+G E R+F +
Sbjct: 203 DVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMR 262
Query: 101 QYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
Q P+ +L SVL + D GK +H +K L+ + +L MY+K C
Sbjct: 263 QRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAK-CGQV 321
Query: 156 --AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A F+ ME NV+ WN+MI+ + AK EA+ LF+++ + +
Sbjct: 322 MVARSFFDQMEIPNVMMWNAMISGY-------------AKNGYTNEAVGLFQEMISKNIR 368
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D T + ACA + + A + I K + +D + ALI +A+CGS+ L+++V
Sbjct: 369 TDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREV 428
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD+ D+V W++++ Y LHG+ ++A+ LF M V P+ TFV LL+AC+H+GLV
Sbjct: 429 FDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLV 488
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG ++FHSM + +G+ + HYAC+VDLLGR G + EA I MP+EP +W LLG
Sbjct: 489 EEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLG 547
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+C+ + L E AA +L L+P ++ +VQ+SN+Y S ++ +R M+ + K
Sbjct: 548 ACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKD 607
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G S IEI ++ F G K HP+ + IF++LE L +LK G++P LHD+ +E K
Sbjct: 608 LGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEK 667
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE L +HSE+LA+ + +++ + +RI KN+R C++CH+ KL S L+ +EIVVR
Sbjct: 668 EETLCNHSERLAIAYGLISTAP----GTTLRITKNLRACINCHSATKLISKLVNREIVVR 723
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFHHFK+ +CSC DYW
Sbjct: 724 DANRFHHFKNGVCSCRDYW 742
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 184/375 (49%), Gaps = 38/375 (10%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH---GNAEECF-RLFCS 98
F+ +N G + AR +FDE P+ +V W A+I GY+ H G+A E + R+ S
Sbjct: 104 FLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163
Query: 99 LLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ P+ F+L VL +C + GK VH + ++ V+V N L+ +Y+K
Sbjct: 164 GVN---PDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRV 220
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
++A VFE ++ RN++SW SMI+ + L +A+ +F +M+ QR +
Sbjct: 221 EQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMR------------QRN-VK 267
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PDW VL+A + ++H + K G E + + +L YA+CG + +++
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSF 327
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD+M +++ WN+++ YA +G EA+ LF M N++ DS T S + AC+ G +
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387
Query: 331 Q----EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G+ + + N V ++D+ + G + A ++ + ++ D V+WS
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVN-----TALIDMFAKCGSVDLAREVF-DRTLDKDVVVWS 441
Query: 387 VLLGSCRKHGETRLA 401
++ HG + A
Sbjct: 442 AMIVGYGLHGRGQDA 456
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
V +RH + +H+ + G + + ++A G I +++VFD+ + WN+I+
Sbjct: 82 VHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAII 141
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
+ Y+ H +A++++S M V PD T +L ACS +++ G +V H + G
Sbjct: 142 RGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRV-HGQIFRLGF 200
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ +V L + GR+ E +++ E + + V W+ ++ ++G
Sbjct: 201 ESDVFVQNGLVALYAKCGRV-EQARIVFEGLDDRNIVSWTSMISGYGQNG 249
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 323/592 (54%), Gaps = 29/592 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ +C ++ QLH ++ D + L+++YA G + AR LFD
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLL--VSGLGPDTVLATKLVDLYAACGLVGHARRLFDG 122
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
MPKRNV W LI YA+ G E +L+ ++ Y P+ F+ L +C L G
Sbjct: 123 MPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETG 182
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ VH L ++V L++MY+K C D+A VF+ + R+ + WNSMIAA+
Sbjct: 183 REVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAY--- 239
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ EAL L R + G+ P T + A A +H
Sbjct: 240 ----------GQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGF 289
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ GF+ + +L+ YA+ G + +++ +F+++ +LVSWN+++ Y +HG EA
Sbjct: 290 GWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEA 349
Query: 302 LQLFSNMNVQ----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
L+LF+ M V+ PD+ TFV +LSAC+H G+V+E + F M++ + + P + H+ C+V
Sbjct: 350 LKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLV 409
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LG GR EA LI+ MPM+PDS IW LL C+ H L ELA KL +LEP D+
Sbjct: 410 DVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAG 469
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SNIY SG + KA +RK M ++K G SWIE++ + H F G HP+
Sbjct: 470 NYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAE 529
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+++LE L G + GY+P+T HD+ ++ K + HSE+LA+ F +++ S +
Sbjct: 530 IYEELERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTK-- 587
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + KN+R+C DCH +KL S ++ +EI++RD NR+HHF + CSC DYW
Sbjct: 588 --LLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 326/558 (58%), Gaps = 27/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV N L++MYAKFG + AR +FD++ R VVSWT++ISGY Q+G+ E +F +
Sbjct: 134 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 193
Query: 101 Q-YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
Q P+ +L SV+ + D GK +H L K L+ + +L MY+K E
Sbjct: 194 QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 253
Query: 156 AWKVFEN-MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ F N ME N+I WN+MI+ + A EEA+ LFR++ + +
Sbjct: 254 VARFFFNRMEKPNLILWNAMISGY-------------ANNGYGEEAIKLFREMITKNIRV 300
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T + A A + + A + I+K + DDT + LI YA+CGSI L++ VF
Sbjct: 301 DSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVF 360
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D++ D+V W+ ++ Y LHG +EA+ L++ M V P+ TF+ LL+AC ++GLV+
Sbjct: 361 DRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVK 420
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG ++FH ++ +HG+ P HY+C+VDLLGR G + +A I MP++P +W LL +
Sbjct: 421 EGWELFH-LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 479
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ H + RL E+AA +L L+P ++ +VQ+SN+Y + + + +R M + K
Sbjct: 480 CKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDL 539
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S IEI + F G + HP+ + IF++L+ L +LK GYVP LHD+ E E
Sbjct: 540 GHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIE 599
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E L HHSE+LA+ + I++ + +RI KN+R C++CH+ +KL S L+ +EI++RD
Sbjct: 600 ETLCHHSERLAVAYGIISTAP----GTTLRITKNLRACINCHSAIKLISKLVDREIIIRD 655
Query: 572 SNRFHHFKDRICSCNDYW 589
+ RFHHFKD +CSC D+W
Sbjct: 656 AKRFHHFKDGVCSCGDFW 673
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 179/377 (47%), Gaps = 24/377 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
F+ IN FG ++ A F E+ + +++ W A+I GY Q + R++ + +
Sbjct: 35 FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 94
Query: 102 YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
PN F+ VL +C GK +H K+ ++V+V N+L++MY+K A
Sbjct: 95 QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 154
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
VF+ + R V+SW S+I+ + + + EAL +F+++++ + PDW
Sbjct: 155 RIVFDKLHDRTVVSWTSIISG-------------YVQNGDPMEALNVFKEMRQCNVKPDW 201
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
V+ A + ++H L+ K G E + I +L YA+ G + +++ F++
Sbjct: 202 IALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNR 261
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M +L+ WN+++ YA +G +EA++LF M N++ DS T S + A + G + E
Sbjct: 262 MEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL-EL 320
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ + ++D+ + G I A + + + + D V+WSV++
Sbjct: 321 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA-RCVFDRVADKDVVLWSVMIMGYG 379
Query: 394 KHGETRLAELAATKLKQ 410
HG + A ++KQ
Sbjct: 380 LHGHGQEAICLYNEMKQ 396
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+H V+ + G + I+A G ++ + + F +++ D++ WN+I+K Y
Sbjct: 16 KHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 75
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG-NKVFHSMLENHGVVP 348
++++ +M V P+ TF+ +L AC G EG K H +G
Sbjct: 76 TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKAC--GGTSVEGIGKQIHGQTFKYGFGS 133
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
+ +V + + G+I A +++ + + V W+ ++ ++G+ A ++
Sbjct: 134 NVFVQNSLVSMYAKFGQISYA-RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM 192
Query: 409 KQ--LEPGDSLGFVQMSNIY 426
+Q ++P D + V + Y
Sbjct: 193 RQCNVKP-DWIALVSVMTAY 211
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/591 (35%), Positives = 334/591 (56%), Gaps = 28/591 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQD-LFVTNHLINMYAKFGYLDDARHLFDEM 68
+L A HG + Q +H + + + ++ ++ + + L++MYAK +L A +F M
Sbjct: 206 SLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGM 265
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYLHG 122
RN V+W+ALI G+ E F LF +L F + S+AS L C D G
Sbjct: 266 TVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMG 325
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HAL K + A + N+L++MY+K+ +EA +F+ + ++ IS+ ++++ +
Sbjct: 326 TQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGY--- 382
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ EEA +F+++Q + PD T ++ AC+ L +H H
Sbjct: 383 ----------VQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGS 432
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ G +T I N+LI YA+CG I LS+QVFDKM D+VSWN+++ Y +HG KEA
Sbjct: 433 VIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEA 492
Query: 302 LQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LF N +PD TF+ L++ACSH+GLV EG F +M +G++P+++HY CMVD
Sbjct: 493 TTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVD 552
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LL R G + EA + I+ MP++ D +W LLG+CR H L + + +++L P +
Sbjct: 553 LLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGN 612
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
FV +SNI+ +G F++A +R K +K PG SWIEI +H F G + HP I
Sbjct: 613 FVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDI 672
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +L+ ++ +K +GY +TS L D+EEE KE+ L +HSEKLA+ F +++ E
Sbjct: 673 YHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLS----LNEDK 728
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I + KN+R+C DCH +K + + + I+VRD+NRFHHFK+ CSC D+W
Sbjct: 729 TIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 191/392 (48%), Gaps = 33/392 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV+ LI++Y + A ++F +MP R+VV+W A+++GYA HG +
Sbjct: 133 DLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQ 192
Query: 101 QY--FFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAH---VYVANALINMYSKS 151
PN +L S+L G VHA L+ LD + V + AL++MY+K
Sbjct: 193 DRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAK- 251
Query: 152 CAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C A +VF M RN ++W+++I F C EA LF+ +
Sbjct: 252 CKHLVYACRVFHGMTVRNEVTWSALIGGFVLC-------------DRMTEAFNLFKDMLV 298
Query: 210 EGMA-PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
EGM + + L+ CA L R + +H+L+AK G D N+L+ YA+ G I+
Sbjct: 299 EGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLIN 358
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
+ +FD++ D +S+ ++L Y +G+A+EA +F M NVQPD AT VSL+ ACS
Sbjct: 359 EATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACS 418
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H +Q G + H + G+ + ++D+ + GRI + ++ +MP D V W
Sbjct: 419 HLAALQHG-RCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSW 476
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGD 415
+ ++ HG + A +K EP D
Sbjct: 477 NTMIAGYGIHGLGKEATTLFLSMKNQGFEPDD 508
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 174/368 (47%), Gaps = 29/368 (7%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVL 114
G L AR +FD +P + ++ ALI Y+ G L+ S+L + PN+++ VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 115 ISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNV 168
+C D G+ +HA A L ++V+ ALI++Y + CA A VF M R+V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIR-CARFGPAANVFAKMPMRDV 165
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
++WN+M+A + + AI M++ R G+ P+ T +L A
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQD------------RGGLRPNASTLVSLLPLLAQ 213
Query: 229 LVTERHASAVHSLIAKYGF---EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
++VH+ + E+ +I AL+ YA+C + + +VF MT + V+W
Sbjct: 214 HGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTW 273
Query: 286 NSILKAYALHGQAKEALQLFSNMNVQP----DSATFVSLLSACSHAGLVQEGNKVFHSML 341
++++ + L + EA LF +M V+ + + S L C+ ++ G ++ H++L
Sbjct: 274 SALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQL-HALL 332
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G+ L ++ + + G I EA L E+ ++ D++ + LL ++G+ A
Sbjct: 333 AKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGALLSGYVQNGKAEEA 391
Query: 402 ELAATKLK 409
L K++
Sbjct: 392 FLVFKKMQ 399
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/560 (36%), Positives = 333/560 (59%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFD--EMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N LI +YAK L AR +F+ +P+R +VSWTA++S YAQ+G E +F
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSH 212
Query: 99 LLQY-FFPNEFSLASVL--ISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ + P+ +L SVL +C D G+ +HA +K L+ + +L MY+K
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 154 DEAWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
K+ F+ M+ N+I WN+MI+ + +AI++F +M N++ +
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-------------V 319
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD + + + ACA + + A +++ + + + DD I++ALI +A+CGS+ ++
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD+ D+V W++++ Y LHG+A+EA+ L+ M V P+ TF+ LL AC+H+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+EG F +++ +H + PQ HYAC++DLLGR G + +A ++I+ MP++P +W LL
Sbjct: 440 VREG-WWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+C+KH L E AA +L ++P ++ +VQ+SN+Y + +++ +R MK + K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SW+E+ R+ F G K HP+ E I +++E + +LK G+V +LHD+ +E
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEE 618
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
EE L HSE++A+ + +++ + + +RI KN+R CV+CH KL S L+ +EIVV
Sbjct: 619 AEETLCSHSERIAIAYGLISTP----QGTPLRITKNLRACVNCHAATKLISKLVDREIVV 674
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFKD +CSC DYW
Sbjct: 675 RDTNRFHHFKDGVCSCGDYW 694
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 209/418 (50%), Gaps = 45/418 (10%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFGYL 58
+HS YA+L + +KQ +H ++ F F+ LI+ + FG +
Sbjct: 18 IHSDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSG-----FLITKLIHASSSFGDI 69
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC 117
AR +FD++P+ + W A+I GY+++ + ++ ++ ++ L P+ F+ +L +C
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 118 DYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEF--RNVI 169
L G+ VHA + DA V+V N LI +Y+K C A VFE + R ++
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIV 188
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SW ++++A +A+ EAL +F +++ + PDW VL A L
Sbjct: 189 SWTAIVSA-------------YAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCL 235
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+ ++H+ + K G E + + +L YA+CG ++ +K +FDKM +L+ WN+++
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA +G A+EA+ +F M +V+PD+ + S +SAC+ G +++ SM E G
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA----RSMYEYVGR 351
Query: 347 VPQLDHY---ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D + ++D+ + G + E +L+ + ++ D V+WS ++ HG R A
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 319/559 (57%), Gaps = 26/559 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D V N + YAK LD A +F M + V SW ALI +AQ+G + LF +
Sbjct: 434 KDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVM 493
Query: 100 LQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
+ P+ F++ S+L++C L GK +H L+ L+ ++ +L+++Y + +
Sbjct: 494 MDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSM 553
Query: 155 EAWK-VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
K +F+ ME ++++ WN MI F +L EAL FRQ+ G+
Sbjct: 554 LLGKLIFDKMENKSLVCWNVMITGFSQNELPC-------------EALDTFRQMLSGGIK 600
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P + VL AC+ + R VHS K +D + ALI YA+CG + S+ +
Sbjct: 601 PQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNI 660
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLV 330
FD++ D WN I+ Y +HG +A++LF N +PDS TF+ +L AC+HAGLV
Sbjct: 661 FDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLV 720
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG K M +GV P+L+HYAC+VD+LGR G++ EA KL+ EMP EPDS IWS LL
Sbjct: 721 TEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLS 780
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
SCR +G+ + E + KL +LEP + +V +SN+Y G +++ R +R+ MK + + K
Sbjct: 781 SCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKD 840
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G SWIEI V+ F + + I + +L ++ +GY P+TS LH++EEE K
Sbjct: 841 AGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGK 900
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
+ L HSEKLA+ F ++N + + +R+ KN+RICVDCHN +KL S ++ ++I+VR
Sbjct: 901 IKILKSHSEKLAISFGLLNTA----KGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVR 956
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+ RFHHFK+ +C+C D+W
Sbjct: 957 DNKRFHHFKNGLCTCGDFW 975
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 22/333 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + L AC H NI ++H +++ D+ ++ +I MY+ G D+R
Sbjct: 91 SKEAIGILLRACGHHKNIHVGRKVHA-LVSASHKLRNDVVLSTRIIAMYSACGSPSDSRG 149
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC---- 117
+FD ++++ + AL+SGY+++ + LF LL P+ F+L V +C
Sbjct: 150 VFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVA 209
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
D G+ VHALALK + +V NALI MY K + A KVFE M RN++SWNS++
Sbjct: 210 DVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMY 269
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A + +F ++ EE EG+ PD T V+ ACA + R
Sbjct: 270 ACSENGGFGECCGVFKRLLISEE----------EGLVPDVATMVTVIPACAAVGEVRMGM 319
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH L K G ++ + N+L+ Y++CG + ++ +FD ++VSWN+I+ Y+ G
Sbjct: 320 VVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEG 379
Query: 297 QAKEALQLFSNMN----VQPDSATFVSLLSACS 325
+ +L M V+ + T +++L ACS
Sbjct: 380 DFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 163/317 (51%), Gaps = 26/317 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D FV N LI MY K G+++ A +F+ M RN+VSW +++ +++G EC +F L
Sbjct: 228 SDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRL 287
Query: 100 L----QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS 151
L + P+ ++ +V+ +C + G +VH LA K + V V N+L++MYSK
Sbjct: 288 LISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSK- 346
Query: 152 CA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C EA +F+ +NV+SWN++I + EL +M+ EE+
Sbjct: 347 CGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEK---------- 396
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ + T VL AC+G +H ++GF D ++ANA + AYA+C S+
Sbjct: 397 --VRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDC 454
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+++VF M + SWN+++ A+A +G ++L LF M + PD T SLL AC+
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR 514
Query: 327 AGLVQEGNKVFHSMLEN 343
++ G ++ ML N
Sbjct: 515 LKFLRCGKEIHGFMLRN 531
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 138/286 (48%), Gaps = 22/286 (7%)
Query: 122 GKLVHAL-ALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ VHAL + L V ++ +I MYS ++ VF+ + +++ +N++++ +
Sbjct: 111 GRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYS 170
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L AI LF ++ L +APD T V KACAG+ AVH
Sbjct: 171 RNALFRDAISLFLEL------------LSATDLAPDNFTLPCVAKACAGVADVELGEAVH 218
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+L K G D + NALI Y +CG + + +VF+ M +LVSWNS++ A + +G
Sbjct: 219 ALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFG 278
Query: 300 EALQLFSNMNVQ------PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
E +F + + PD AT V+++ AC+ G V+ G V H + G+ ++
Sbjct: 279 ECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMG-MVVHGLAFKLGITEEVTVN 337
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
+VD+ + G + EA L +M + V W+ ++ K G+ R
Sbjct: 338 NSLVDMYSKCGYLGEARALF-DMNGGKNVVSWNTIIWGYSKEGDFR 382
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/597 (35%), Positives = 336/597 (56%), Gaps = 30/597 (5%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T +++ C L G+ A+ +H + + + + ++LFV N LI++Y K G L++A+ +
Sbjct: 169 TVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLD--KELFVCNALIDVYGKLGMLEEAQCV 226
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLAS----VLISCDY 119
F M R++V+W ++ISG Q G ++F + P+ +L S + D
Sbjct: 227 FHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDG 286
Query: 120 LHGKLVHALALKFSLDAHVYVA-NALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
K +H ++ D +A NA+++MY+K S + A ++F++M ++ +SWN++I
Sbjct: 287 RSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITG 346
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L +A+E + M+ + EG+ TF VL A + L +
Sbjct: 347 YMQNGLANEAVERYGHMQ------------KHEGLKAIQGTFVSVLPAYSHLGALQQGMR 394
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+L K G D + LI YA+CG ++ + +F+KM WN+I+ +HG
Sbjct: 395 MHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGH 454
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EAL LFS M ++PD TFVSLL+ACSHAGLV +G F M + +VP HYA
Sbjct: 455 GAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYA 514
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CM D+LGR G++ EA I+ MP++PDS +W LLG+CR HG + ++A+ L +L+P
Sbjct: 515 CMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPE 574
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR--H 472
+ +V MSN+Y G ++ +R ++ ++K PG S IE++ V+ F SG + H
Sbjct: 575 NVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPH 634
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
PQ E I +L L+ +++ +GYV + S L D+E++ KE L +HSE+LA+ F I+N S
Sbjct: 635 PQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPS 694
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ + I KN+R+C DCHN K S + +EI+VRDSNRFHHFKD CSC D+W
Sbjct: 695 ----RTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 216/408 (52%), Gaps = 29/408 (7%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL- 100
+F + L++ Y +FG + +A +FDEM +R+V +W A++SG ++ A E LF ++
Sbjct: 103 VFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
+ + +++SVL C D + ++H A+K LD ++V NALI++Y K +E
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A VF ME R++++WNS+I+ C+ Q AL +F+ ++ G++PD
Sbjct: 223 AQCVFHGMECRDLVTWNSIIS---GCEQRGQT----------AAALKMFQGMRGSGVSPD 269
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFE-DDTVIANALIHAYARCGSISLSKQVF 274
T + A A R A ++H + + G++ DD + NA++ YA+ +I ++++F
Sbjct: 270 VLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMF 329
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLV 330
D M D VSWN+++ Y +G A EA++ + +M ++ TFVS+L A SH G +
Sbjct: 330 DSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGAL 389
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
Q+G ++ H++ G+ + C++DL + G++ EA L +MP W+ ++
Sbjct: 390 QQGMRM-HALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGP-WNAIIS 447
Query: 391 SCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKAR 436
HG A ++++Q ++P D + FV + +G ++ R
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKP-DHVTFVSLLAACSHAGLVDQGR 494
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 213/480 (44%), Gaps = 40/480 (8%)
Query: 103 FFPNEFSLASVLISC-DYLHGKLVHALALKFSL-DAHVYVANALINMYSK-SCADEAWKV 159
F P+ F+ S++ + +HA AL+ L V+ + +L++ Y + EA+KV
Sbjct: 66 FRPDGFTFPSLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKV 125
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ M R+V +WN+M++ A+A+ LF +M E G+A D T
Sbjct: 126 FDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGE-------------GVAGDTVTV 172
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
S VL C L + A +H K+G + + + NALI Y + G + ++ VF M
Sbjct: 173 SSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMEC 232
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
DLV+WNSI+ GQ AL++F M V PD T VSL SA + G + +
Sbjct: 233 RDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSL 292
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ V + +VD+ ++ I A+++ MP++ DSV W+ L+ ++G
Sbjct: 293 HCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQ-DSVSWNTLITGYMQNG 351
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK--------GSRVR 448
LA A + ++ + L +Q + + L +++ +++ M+ G V
Sbjct: 352 ---LANEAVERYGHMQKHEGLKAIQGTFVSVLP-AYSHLGALQQGMRMHALSIKIGLNVD 407
Query: 449 KYPGLSWIEIENRVHEFASGG---KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
Y G I++ + + A ++ P+R +I L G+ E +
Sbjct: 408 VYVGTCLIDLYAKCGKLAEAMLLFEKMPRRST--GPWNAIISGLGVHGHGAEALTLFSRM 465
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
++E + H ++L+ A + G + + RS +M+ V +D+LG+
Sbjct: 466 QQEGIKPD---HVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGR 522
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/598 (37%), Positives = 328/598 (54%), Gaps = 37/598 (6%)
Query: 23 QAMQLHEHM---INNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
Q +QL E + I E L V N L++MY K G +D AR +FDE +N+V + +
Sbjct: 254 QDLQLGEQVCTCIGELELEVNALMV-NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTI 312
Query: 80 ISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
+S Y + G A E + +L++ P+ ++ S + +C L GK H L+ L
Sbjct: 313 MSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGL 372
Query: 135 DAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFA 192
+ V NA+INMY K E A +VF+ M + +SWNS+IA F R +E+ A ++F+
Sbjct: 373 EGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMES-AWKIFS 431
Query: 193 KMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
M + + EA+ LFR +Q EG+ D T V AC L
Sbjct: 432 AMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDL 491
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
A +H I K D + AL+ +ARCG + QVF+KM D+ +W + + A A+
Sbjct: 492 AKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAM 551
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G A++LF M ++PD FV+LL+A SH GLV++G +F SM + +G+ PQ
Sbjct: 552 EGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAV 611
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY CMVDLLGR G + EA LI M MEP+ VIW LL +CR H +A AA ++ +L
Sbjct: 612 HYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISEL 671
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+P + V +SNIY +G ++ +R +K K PG S IEI ++ EF +G +
Sbjct: 672 DPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDES 731
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP+ I L+E+ +L+ +GYVP+ + L D+ E+ KE L HSEKLA+ FA+++ G
Sbjct: 732 HPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTG 791
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+RIC DCH+F KL S +EI+VRD+NRFH F+ CSC DYW
Sbjct: 792 ----QGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 18/232 (7%)
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
++S+I F AC L +AI +FRQL G PD TF VL AC
Sbjct: 107 FSSLIRGFSACGLGYKAI-------------VVFRQLMCMGAVPDNFTFPFVLSACTKSA 153
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
VH I K GFE D + N+LIH Y CG I ++VFDKM+ ++VSW S++
Sbjct: 154 ALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIG 213
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
YA G KEA+ LF M ++P+S T V ++SAC+ +Q G +V + E V
Sbjct: 214 GYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEV 273
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
L A +VD+ + G I +A K+ E ++ + V+++ ++ + + G R
Sbjct: 274 NALMVNA-LVDMYMKCGAIDKARKIFDEC-VDKNLVLYNTIMSNYVRQGLAR 323
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 183/403 (45%), Gaps = 29/403 (7%)
Query: 12 FHACALHGNIKQA-MQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF--DEM 68
F C +KQ Q+ ++ +N+ P +L + + + Y A LF D
Sbjct: 40 FKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNG 99
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHGK 123
+++LI G++ G + +F L+ P+ F+ VL +C G
Sbjct: 100 IMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGF 159
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH +K + ++V N+LI+ Y + C D +VF+ M RNV+SW S+I +
Sbjct: 160 QVHGAIVKMGFERDMFVENSLIHFYGE-CGEIDCMRRVFDKMSERNVVSWTSLIGGY--- 215
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
AK +EA+ LF ++ G+ P+ T V+ ACA L + V +
Sbjct: 216 ----------AKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTC 265
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I + E + ++ NAL+ Y +CG+I ++++FD+ +LV +N+I+ Y G A+E
Sbjct: 266 IGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREV 325
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L + M +PD T +S +SACS V G K H + +G+ + +++
Sbjct: 326 LAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCG-KWCHGYVLRNGLEGWDNVCNAIIN 384
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + G+ A ++ M + V W+ L+ ++G+ A
Sbjct: 385 MYMKCGKQEMACRVFDRM-LNKTRVSWNSLIAGFVRNGDMESA 426
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 37/194 (19%)
Query: 285 WNSILKAYALHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVF---- 337
++S+++ ++ G +A+ +F M PD+ TF +LSAC+ + + EG +V
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 338 -----------HSMLENHGVVPQLD---------------HYACMVDLLGRVGRILEAEK 371
+S++ +G ++D + ++ + G EA
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 372 LIREM---PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFVQMSNIYC 427
L EM + P+SV ++ +C K + +L E T + +LE ++L + ++Y
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 428 LSGSFNKARLIRKE 441
G+ +KAR I E
Sbjct: 287 KCGAIDKARKIFDE 300
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/627 (35%), Positives = 349/627 (55%), Gaps = 62/627 (9%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ ACA G + Q+H ++++ ++ ++N L+NMY K + A +FD
Sbjct: 12 VFVIALDACAASGELDHGRQIHSSVVDS--GLTSNIIISNSLVNMYGKCQDVPCAEKVFD 69
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--------------------------- 99
M R+VVSWTA+++ YAQ+G + +F ++
Sbjct: 70 GMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALEL 129
Query: 100 -----LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAH-VYVANALINMYS 149
L+ NEF+L S+L +C L + +HA A + V N+++NMY+
Sbjct: 130 FHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYA 189
Query: 150 KSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
+ C + K F+++E + +++W+ M+AA+ AQ+ K + A F+++
Sbjct: 190 R-CGSLLDTKKAFDSLEEKGLVAWSIMLAAY------AQS-----KDGSGRRAFKFFQEM 237
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF-EDDTVIANALIHAYARCGS 266
+ EG+ P TF L ACA + T H ++H A GF E V+ N +I+ Y +CGS
Sbjct: 238 EAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGS 297
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSA 323
S +K VFD+M L+SWNS++ AYA +G A EAL M +Q PDS T VS+L
Sbjct: 298 PSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYG 357
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM-EPDS 382
SHAGL++ G + F S +++HG+ P C+VDLL R G + AE+LI P + D+
Sbjct: 358 LSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADT 417
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ W LL +C+ +G+ + A ++ +LEP S FV ++N+Y G ++ A IRK M
Sbjct: 418 IAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMM 477
Query: 443 KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL 502
+ V+K PG SWIE+ VHEF SG +HP+ I ++LE+L +++ GYVP+T+ +
Sbjct: 478 ERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVV 537
Query: 503 HDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDL 562
HD+EE KEE L HSE+LA+VF +M+ R IR++KN+R+C DCH K+ S +
Sbjct: 538 HDVEEGDKEEILSRHSERLAIVFGLMST----RPGETIRVVKNLRVCSDCHAATKIISSV 593
Query: 563 LGKEIVVRDSNRFHHFKDRICSCNDYW 589
+G+EIVVRDS+RFHHFK CSC D+W
Sbjct: 594 VGREIVVRDSSRFHHFKHGQCSCGDFW 620
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+Q EG PD F I L ACA H +HS + G + +I+N+L++ Y +C
Sbjct: 1 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSH 326
+ +++VFD M D+VSW ++L YA +G +AL +F M + D ++ ++++A
Sbjct: 61 VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMP-RKDDVSWNAVINASVG 119
Query: 327 AGLVQEGNKVFHSM 340
Q+ ++FH M
Sbjct: 120 NSKFQDALELFHGM 133
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 336/599 (56%), Gaps = 31/599 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ + Y L HAC ++ +++ ++NN P+ + + + LI +++ LD AR
Sbjct: 137 TPEAYTDLLHACISAKSLHHGIKICSLILNN-PSLRHNPKLLSKLITLFSVCRRLDLARK 195
Query: 64 LFDEMPKRNVVS---WTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC-- 117
+FD++ ++++ W A+ GY+++G+ + ++ +L F P FS++ L +C
Sbjct: 196 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 255
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
D G+ +HA +K V N L+ +Y +S D+A KVF+ M RNV++WNS+
Sbjct: 256 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 315
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ + +K E LFR++Q E + W T + +L AC+ +
Sbjct: 316 IS-------------VLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLT 362
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ I K + D + N+L+ Y +CG + S++VFD M DL SWN +L YA+
Sbjct: 363 GKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAI 422
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+G +E + LF M V PD TFV+LLS CS GL + G +F M V P L+
Sbjct: 423 NGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE 482
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYAC+VD+LGR G+I EA K+I MP +P + IW LL SCR HG + E+AA +L L
Sbjct: 483 HYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVL 542
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP + +V +SNIY + ++ IR+ MK V+K G SW+++++++ F +GG
Sbjct: 543 EPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGY 602
Query: 472 HPQREAIFKKL-EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+ +KK+ EL ++ GY P TS+ LHD++EE K + HSE+LA +++++
Sbjct: 603 EFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHT 662
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
G E IRI KN+R+C DCH++MK+ S + + IV+RD+ RFHHF D ICSC DYW
Sbjct: 663 G----EGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 717
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 313/553 (56%), Gaps = 47/553 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV LI+MY++FG+ AR LFD+MP R++ SW A+ISG Q+GNA + +
Sbjct: 149 NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL---- 204
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
+E L + K + V + ++MY+K D A KV
Sbjct: 205 -----DEMRLEGI-----------------KMNFVTVVSILPVFVDMYAKLGLLDSAHKV 242
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
FE + ++VISWN++I + L ++AIE++ M+ +E + P+ T+
Sbjct: 243 FEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEII------------PNQGTW 290
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+L A A + + +H + K D +A LI Y +CG + + +F ++
Sbjct: 291 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 350
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
V+WN+I+ + +HG A++ L+LF M V+PD TFVSLLSACSH+G V+EG
Sbjct: 351 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 410
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F +++ +G+ P L HY CMVDLLGR G + A I++MP++PD+ IW LLG+CR HG
Sbjct: 411 FR-LMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 469
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
L + A+ +L +++ + +V +SNIY G + +R + ++K PG S I
Sbjct: 470 NIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 529
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
E+ +V F +G + HP+ + I+++L L ++K +GY+P+ S L D+EE+ KE L
Sbjct: 530 EVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTS 589
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSE+LA+ F I++ +S IRI KN+R+C DCHN K S + +EIVVRDSNRFH
Sbjct: 590 HSERLAIAFGIIST----PPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFH 645
Query: 577 HFKDRICSCNDYW 589
HFKD ICSC DYW
Sbjct: 646 HFKDGICSCGDYW 658
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 195/394 (49%), Gaps = 59/394 (14%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q +F++ L+N+YA G + +R FD++P+++V +W ++IS Y +G+ E F L
Sbjct: 49 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQL 108
Query: 100 L--QYFFPNEFSLASVLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
L P+ ++ VL +C L G+ +H A K +V+VA +LI+MYS+
Sbjct: 109 LLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 168
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A +F++M FR++ SWN+MI+ AQA+++ +M+ EG+ +
Sbjct: 169 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR-------------LEGIKMN 215
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+ T +L + YA+ G + + +VF+
Sbjct: 216 FVTVVSILP-------------------------------VFVDMYAKLGLLDSAHKVFE 244
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQ 331
+ D++SWN+++ YA +G A EA++++ M + P+ T+VS+L A +H G +Q
Sbjct: 245 IIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQ 304
Query: 332 EGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+G K+ +++ + LD + C++D+ G+ GR+++A L ++P E SV W+ ++
Sbjct: 305 QGMKIHGRVIKTN---LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAII 360
Query: 390 GSCRKHGET-RLAELAATKLKQLEPGDSLGFVQM 422
HG + +L L + D + FV +
Sbjct: 361 SCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSL 394
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 51/292 (17%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAFRA 180
K +HAL + ++++ L+N+Y+ + D + F+ + ++V +WNSMI+A+
Sbjct: 36 KCLHALLVVAGKVQSIFISTRLVNLYA-NLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+AI F + L L +++ PD+ TF VLKAC LV R +H
Sbjct: 95 NGHFHEAIGCFYQ-------LLLVSEIR-----PDFYTFPPVLKACGTLVDGR---KIHC 139
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K GF+ + +A +LIH Y+R G +++ +FD M + D+ SWN+++ +G A +
Sbjct: 140 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 199
Query: 301 ALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
AL + M ++ FV+++S ++P VD+
Sbjct: 200 ALDVLDEMRLEGIKMNFVTVVS-----------------------ILP------VFVDMY 230
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
++G + A K+ +P++ D + W+ L+ ++G LA A K +E
Sbjct: 231 AKLGLLDSAHKVFEIIPVK-DVISWNTLITGYAQNG---LASEAIEVYKMME 278
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
A +H+L+ G I+ L++ YA G +SLS+ FD++ D+ +WNS++ AY
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 295 HGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G EA+ F + ++PD TF +L AC G + +G K+ H G +
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKI-HCWAFKLGFQWNV 150
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
A ++ + R G A L +MP D W+ ++ ++G A L +
Sbjct: 151 FVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQA-LDVLDEMR 208
Query: 411 LEPGDSLGFVQMSNI 425
LE G + FV + +I
Sbjct: 209 LE-GIKMNFVTVVSI 222
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/632 (34%), Positives = 338/632 (53%), Gaps = 74/632 (11%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR---- 62
+ A + CA G+++ ++H M+ N + D+ + N +++MYAK G + AR
Sbjct: 114 VLAAVVRCCAGMGDVESGKRVHGWMLRNGVH--LDVVLCNAVLDMYAKCGQFERARRVFG 171
Query: 63 ---------------------------HLFDEMPKRNVVSWTALISGYAQHGNAEECFRL 95
LFDE P R+ SW +ISG + G+A +
Sbjct: 172 AMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSH 231
Query: 96 FCSLLQ-------YFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMY 148
+ Q Y + F LA +L+ D G+ +H L +L+ +V ++L++MY
Sbjct: 232 LRRMAQAGVVFNHYTYSTAFVLAGMLLLPDL--GRQLHGRVLIAALEGDAFVRSSLMDMY 289
Query: 149 SK-SCADEAWKVFE-------NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
K + A VF+ +M F +W++M+A + + EEEA
Sbjct: 290 CKCGLLEAAASVFDHWSPLTRDMNF----AWSTMVAGY-------------VQNGREEEA 332
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LFR++ REG+A D T + V ACA + VH + K ++ D +A+A++
Sbjct: 333 LDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDM 392
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATF 317
YA+CG++ ++ +FD+ ++ W S+L +YA HGQ + A++LF M + P+ T
Sbjct: 393 YAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITL 452
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
V +LSACSH GLV EG F M E +G+VP ++HY C+VDL GR G + +A+ I E
Sbjct: 453 VGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENN 512
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
+ ++++W LL +CR H A+LA+ KL QLE D+ +V +SNIY + ++
Sbjct: 513 INHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFE 572
Query: 438 IRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPE 497
+R M+ +VRK PG SWI ++N VH F +G HPQ I+ LE+L+ +LK +GY
Sbjct: 573 LRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSR 632
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T L +HD+E+E +E L HSEKLA+ F I++ S + +RI KN+R+C DCH +K
Sbjct: 633 TDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPS----GTPLRIFKNLRVCEDCHEAIK 688
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S G+EIVVRD RFHHFKD CSC D+W
Sbjct: 689 YISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 171/380 (45%), Gaps = 47/380 (12%)
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISC 117
DAR +FDE P R WT ISG A+ G + R F +L PN F LA+V+ C
Sbjct: 63 DARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCC 122
Query: 118 ----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISW 171
D GK VH L+ + V + NA+++MY+K C + A +VF M R+ +SW
Sbjct: 123 AGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAK-CGQFERARRVFGAMAERDAVSW 181
Query: 172 NSMIAA------------------FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
N I A R I + + +AL R++ + G+
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVV 241
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+ T+S L+ +H + E D + ++L+ Y +CG + + V
Sbjct: 242 FNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASV 301
Query: 274 FD---KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
FD +T +W++++ Y +G+ +EAL LF M V D T S+ +AC++
Sbjct: 302 FDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANV 361
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDH------YACMVDLLGRVGRILEAEKLIREMPMEPD 381
G+V++G +V HG V +L + + +VD+ + G LE + I + +
Sbjct: 362 GMVEQGRQV-------HGCVEKLWYKLDAPLASAIVDMYAKCGN-LEDARSIFDRACTKN 413
Query: 382 SVIWSVLLGSCRKHGETRLA 401
+W+ +L S HG+ R+A
Sbjct: 414 IAVWTSMLCSYASHGQGRIA 433
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 30/267 (11%)
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A VF+ R W I+ A + FA+M E EA P
Sbjct: 63 DARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA------------TP 110
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ + V++ CAG+ VH + + G D V+ NA++ YA+CG +++VF
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGN 334
M D VSWN + A G ++QLF ++ D+ ++ +++S +G +
Sbjct: 171 GAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLR-DTTSWNTIISGLMRSGHAADAL 229
Query: 335 KVFHSMLENHGVVPQLDHY--------ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
M + GVV +HY A M+ LL +GR L LI +E D+ + S
Sbjct: 230 SHLRRMAQA-GVV--FNHYTYSTAFVLAGML-LLPDLGRQLHGRVLI--AALEGDAFVRS 283
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEP 413
L+ K G L E AA+ P
Sbjct: 284 SLMDMYCKCG---LLEAAASVFDHWSP 307
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 336/599 (56%), Gaps = 31/599 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ + Y L HAC ++ +++ ++NN P+ + + + LI +++ LD AR
Sbjct: 130 TPEAYTDLLHACISAKSLHHGIKICSLILNN-PSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 64 LFDEMPKRNVVS---WTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC-- 117
+FD++ ++++ W A+ GY+++G+ + ++ +L F P FS++ L +C
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
D G+ +HA +K V N L+ +Y +S D+A KVF+ M RNV++WNS+
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 308
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ + +K E LFR++Q E + W T + +L AC+ +
Sbjct: 309 IS-------------VLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLT 355
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ I K + D + N+L+ Y +CG + S++VFD M DL SWN +L YA+
Sbjct: 356 GKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+G +E + LF M V PD TFV+LLS CS GL + G +F M V P L+
Sbjct: 416 NGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE 475
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYAC+VD+LGR G+I EA K+I MP +P + IW LL SCR HG + E+AA +L L
Sbjct: 476 HYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVL 535
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP + +V +SNIY + ++ IR+ MK V+K G SW+++++++ F +GG
Sbjct: 536 EPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGY 595
Query: 472 HPQREAIFKKL-EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+ +KK+ EL ++ GY P TS+ LHD++EE K + HSE+LA +++++
Sbjct: 596 EFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHT 655
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
G E IRI KN+R+C DCH++MK+ S + + IV+RD+ RFHHF D ICSC DYW
Sbjct: 656 G----EGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 305/520 (58%), Gaps = 28/520 (5%)
Query: 81 SGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC--DYL--HGKLVHALALKFSLD 135
SGY + A C ++ +L + PN+F+ ++ +C DY GK +HA LKF
Sbjct: 67 SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 136 AHVYVANALINMYSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQAIELFA 192
A + N LI+MY ++A +VF+NM RN +SWN+MIAA+ Q+ L
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAY------VQSNRL-- 178
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
EA LF +++ E + D + +L AC GL +H I K G E D+
Sbjct: 179 -----HEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSK 233
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN--- 309
+A +I Y +CG + + +VF+++ + SWN ++ A+HG+ + A++LF M
Sbjct: 234 LATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREM 293
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
V PD TFV++LSAC+H+GLV+EG F M E G+ P ++H+ CMVDLLGR G + EA
Sbjct: 294 VAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEA 353
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
KLI EMP+ PD+ + L+G+CR HG T L E K+ +LEP +S +V ++N+Y +
Sbjct: 354 RKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASA 413
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
G + +RK M V+K PG S IE E+ V EF +GG+ HPQ + I+ KL+E++ +
Sbjct: 414 GRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETI 473
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRIC 549
+ +GYVP+T LHDI+EE KE LY+HSEKLA+ F ++ + +RI KN+RIC
Sbjct: 474 RSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKT----KPGETLRISKNLRIC 529
Query: 550 VDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH KL S + +EI++RD NRFHHF+ CSC DYW
Sbjct: 530 RDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 196/440 (44%), Gaps = 84/440 (19%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
Y L AC + I++ Q+H H++ F D F N+LI+MY F L+ AR +FD
Sbjct: 97 YPPLIRACCIDYAIEEGKQIHAHVLKFGFG---ADGFSLNNLIHMYVNFQSLEQARRVFD 153
Query: 67 EMPK--RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL--- 120
MP+ RN VSW A+I+ Y Q E F LF + L+ ++F AS+L +C L
Sbjct: 154 NMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGAL 213
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK +H K ++ +A +I+MY K C ++A +VF + + + SWN MI
Sbjct: 214 EQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGG- 272
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
A E A+ LF++++RE +APD TF VL ACA GLV E
Sbjct: 273 ------------LAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEE---- 316
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
K+ F+ T + + + F M DL+ +L
Sbjct: 317 ------GKHYFQYMTEVLG-----------LKPGMEHFGCMV--DLLGRAGLL------- 350
Query: 297 QAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE----NHGVVPQLDH 352
+EA +L + M V PD+ +L+ AC G + G ++ ++E N G
Sbjct: 351 --EEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSG------R 402
Query: 353 YACMVDLLGRVGRILEAEKL--------IREMP----MEPDSVIWSVLLGSCRKHGETRL 400
Y + +L GR + K+ +++ P +E +S + + G R H + +
Sbjct: 403 YVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGG-RAHPQAK- 460
Query: 401 AELAATKLKQLEPGDSLGFV 420
E+ A + LE S+G+V
Sbjct: 461 -EIYAKLDEILETIRSIGYV 479
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ A++ AC G ++Q +H ++ + L T +I+MY K G L+ A +F+
Sbjct: 199 VAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATT--VIDMYCKCGCLEKASEVFN 256
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC 117
E+P++ + SW +I G A HG E LF + + P+ + +VL +C
Sbjct: 257 ELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSAC 308
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 329/598 (55%), Gaps = 39/598 (6%)
Query: 24 AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
AM + + P + + T +I Y + L+ AR +F+ M + +W A+ISGY
Sbjct: 207 AMVSARKLFDEMPKRDELTWTT--MITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264
Query: 84 AQHGNAEECFRLFCSLLQYFFP--NEFSLASVLISC----DYLHGKLVHALALKFSLDAH 137
G +E L C +++ ++ + +++ +C + GK +HA LK L+ +
Sbjct: 265 VHCGCFQEALTL-CRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPN 323
Query: 138 ----VYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ V+NALI +Y K+ DEA K+F M RN+I+WN++++ + +A F
Sbjct: 324 HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFE 383
Query: 193 KM--KN----------------EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+M KN +E L LF+Q++ +G P F+ L AC+ L +
Sbjct: 384 EMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALEN 443
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ + G+E + NA+I YA+CG + ++ VF M DLVSWNS++ A
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG +A++LF M V PD TF+++L+ACSHAGLV++G F+SMLE++G+ P D
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCED 563
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYA MVDL R G A +I MP +P + +W LL CR HG L AA +L +L
Sbjct: 564 HYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKL 623
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
P + +V +SNIY G +N +RK M+ VRK P SWIE+EN+VH F
Sbjct: 624 MPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDV 683
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP+ ++++ LE+L ++K +GY+P+T LHD+E E KE L HSEKLA+ F IM
Sbjct: 684 HPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMK-- 741
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R+ KNIRIC DCHN K S + +EI+VRD RFHHFK+ CSC DYW
Sbjct: 742 --LPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 173/375 (46%), Gaps = 62/375 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y T+ ACA G+ + Q+H +++ N PN L V+N LI +Y K +D+AR +F
Sbjct: 292 YTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351
Query: 66 DEMPKRNVVSWTALISGY-------------------------------AQHGNAEECFR 94
MP RN+++W A++SGY AQ+G +E +
Sbjct: 352 YAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLK 411
Query: 95 LFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYS 149
LF + L F P +F+ A L +C L +G+ +HA + ++ + V NA+I+MY+
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471
Query: 150 KSCADEAWK-VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
K EA + VF M +++SWNSMIAA +AIE LF Q+
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIE-------------LFDQML 518
Query: 209 REGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+EG+ PD TF VL AC AGLV E+ +S++ YG ++ + R G
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLV-EKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGM 577
Query: 267 ISLSKQVFDKMTYHDLVS-WNSILKAYALHGQA----KEALQLFSNMNVQPDSATFVSLL 321
S ++ V D M W ++L +HG + A QLF M + T+V L
Sbjct: 578 FSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM--PQNDGTYVLLS 635
Query: 322 SACSHAGLVQEGNKV 336
+ + G + KV
Sbjct: 636 NIYADVGRWNDVAKV 650
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 204/492 (41%), Gaps = 83/492 (16%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWT 77
N+ A QL E + N D LI Y G L+ R +F+ P R+ V +
Sbjct: 63 NVVYARQLFEEIPN------PDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYN 116
Query: 78 ALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHGK-----LVHALALK 131
A+I+GYA +G+ LF ++ + F P++F+ SVL + G +H +K
Sbjct: 117 AMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVK 176
Query: 132 FSLD-AHVYVANALINMYSKSCAD---------EAWKVFENMEFRNVISWNSMIAAFRAC 181
+ V NAL+++Y K ++ A K+F+ M R+ ++W +MI +
Sbjct: 177 TGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRN 236
Query: 182 KLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVL 223
A E+F M +EAL L R+++ G+ D T++ ++
Sbjct: 237 DDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTII 296
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDD----TVIANALIHAYARCGSISLSKQVFDKMTY 279
ACA + + + +H+ I K + ++NALI Y + + ++++F M
Sbjct: 297 SACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPV 356
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMNV----------------------------- 310
++++WN+IL Y G+ +EA F M V
Sbjct: 357 RNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQM 416
Query: 311 -----QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
+P F L+ACS G ++ G ++ H+ L + G L M+ + + G
Sbjct: 417 RLDGFEPCDFAFAGALTACSVLGALENGRQL-HAQLVHLGYESSLSVGNAMISMYAKCGV 475
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE-TRLAELAATKLKQLEPGDSLGFVQMSN 424
+ AE + MP D V W+ ++ + +HG + EL LK+ D + F+ +
Sbjct: 476 VEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534
Query: 425 IYCLSGSFNKAR 436
+G K R
Sbjct: 535 ACSHAGLVEKGR 546
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 143/356 (40%), Gaps = 86/356 (24%)
Query: 105 PNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENM 163
P FSLA + VHA + + N L+ MY KS A ++FE +
Sbjct: 26 PASFSLA-----------RAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEI 74
Query: 164 EFRNVISWNSMIAAF--------------------RACKLEAQAIELFAKMKNEEEALFL 203
+ I+ ++I A+ R I +A + AL L
Sbjct: 75 PNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALEL 134
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLV-TERHASAVHSLIAKYGFE-DDTVIANALIHAY 261
FR ++R+ PD TF+ VL A V E+ +H + K G + + NAL+ Y
Sbjct: 135 FRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVY 194
Query: 262 AR--------CGSISLSKQVFDKMTYHDLVSWNSILKAYALH------------------ 295
+ C ++ ++++FD+M D ++W +++ Y +
Sbjct: 195 VKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLG 254
Query: 296 -------------GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
G +EAL L M +Q D T+ +++SAC++ G Q G ++
Sbjct: 255 AAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAY 314
Query: 340 MLENHGVVPQLDHYAC------MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+L+N + P +H C ++ L + ++ EA K+ MP+ + + W+ +L
Sbjct: 315 ILKNE-LNP--NHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAIL 366
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/574 (35%), Positives = 318/574 (55%), Gaps = 53/574 (9%)
Query: 52 YAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSL 110
YA G LD + +F+ + NV S++A+I + Q + F + +L PN F+
Sbjct: 89 YAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTF 148
Query: 111 ASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKS----CA------------- 153
+SVL SC GK++H A+K L + +YV L+++Y++ CA
Sbjct: 149 SSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLV 208
Query: 154 ---------------DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
D+A +FE M+ R+V+ WN MI + A+
Sbjct: 209 SLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGY-------------AQSGVPN 255
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
E+L LFR++ P+ T VL AC L +HS I G + + + ALI
Sbjct: 256 ESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALI 315
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSA 315
Y++CGS+ ++ VFD++ D+V+WNS++ YA+HG ++ ALQLF M +P
Sbjct: 316 DMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDI 375
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF+ +LSAC H GLV+EG F M + +G+ P+++HY CMV+LLGR G + EA L++
Sbjct: 376 TFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKN 435
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
M + D V+W LLG CR H +L E A L + +S +V +SN+Y +G++
Sbjct: 436 MTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGV 495
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
+R MK + K G S IE++N+VHEF +G ++HP+ + I+ L E+ LK GY
Sbjct: 496 AKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYT 555
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNF 555
P+T + LHD+ EE KE+ L HSEKLA+ F +++ + + ++I+KN+R+C DCH
Sbjct: 556 PQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLIST----KPGTTVKIVKNLRVCSDCHTV 611
Query: 556 MKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
MK+ S++ G++IV+RD NRFHHF+D +CSC DYW
Sbjct: 612 MKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
H +H+ + + G + ++ L +YA G + S VF+ ++ S+++I+ ++
Sbjct: 62 HLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHV 121
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
A +S M V+P++ TF S+L +CS E KV H G+ L
Sbjct: 122 QSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS-----LESGKVLHCQAIKLGLGSDL 176
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+VD+ R G ++ A +L +MP E V + +L K GE + A + +
Sbjct: 177 YVRTGLVDVYARGGDVVCARQLFDKMP-ERSLVSLTTMLTCYSKMGEL---DKARSLFEG 232
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKA-RLIRK 440
++ D + + M Y SG N++ +L R+
Sbjct: 233 MKERDVVCWNVMIGGYAQSGVPNESLKLFRR 263
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/600 (35%), Positives = 338/600 (56%), Gaps = 31/600 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLD 59
F+ + + T A G A +H ++ + +P+ V L+ +Y + G +
Sbjct: 243 FMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPR---VGVGLLQLYTQLGDMS 299
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD 118
DA +F+EMPK +VV W+ +I+ + Q+G + +F + + F PNEF+L+S+L C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCA 359
Query: 119 YLH----GKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWN 172
G+ +H L +K D VYV+NALI++Y+K C D A K+F + +NV+SWN
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAK-CEKMDTAVKLFAELSSKNVVSWN 418
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
++I + + +AL +FR+ R ++ TFS L ACA L +
Sbjct: 419 TVIVGYE-------------NLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH L K ++N+LI YA+CG I +++ VF++M D+ SWN+++ Y
Sbjct: 466 ELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGY 525
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ HG ++AL++F M + +P+ TF+ +LS CS+AGL+ +G F SM+ +HG+ P
Sbjct: 526 STHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPC 585
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
L+HY CMV L GR G++ +A LI +P EP +IW +L + A +A ++
Sbjct: 586 LEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEIL 645
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
++ P D +V +SN+Y + + IRK MK V+K PGLSWIE + VH F+ G
Sbjct: 646 KINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGS 705
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
HP + I LE L + GYVP+ + L D+++E K+++L+ HSE+LAL + ++
Sbjct: 706 SDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVR 765
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S R+ I IMKN+RIC DCH+ MK+ S ++ +++V+RD NRFHHF +CSC+D+W
Sbjct: 766 MPS---SRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 184/407 (45%), Gaps = 46/407 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y T+ C + A +H ++ DLF TN L+N Y K G+ DA +LFDE
Sbjct: 52 YGTMLRRCIRKNDSVSAKAIHCDILKK--GSCLDLFATNILLNAYVKAGFDKDALNLFDE 109
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRL-----------FCSLLQYFFPNEFSLASVLIS 116
MP+RN VS+ L GYA RL F S L+ F SL I
Sbjct: 110 MPERNNVSYVTLTQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFV----SLDKAEI- 164
Query: 117 CDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
C +LH +V K D++ +V ALIN YS D A VFE + ++++ W
Sbjct: 165 CWWLHSPIV-----KLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVW---- 215
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A +C +E E ++L L ++ +G P+ TF LKA GL A
Sbjct: 216 AGIVSCYVENGCFE---------DSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFA 266
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+VH I K +E D + L+ Y + G +S + +VF++M +D+V W+ ++ + +
Sbjct: 267 KSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 296 GQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G +A+ +F M V P+ T S+L+ C+ G ++ H ++ G LD
Sbjct: 327 GFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQL-HGLVVKVGF--DLDV 383
Query: 353 YA--CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
Y ++D+ + ++ A KL E+ + V W+ ++ GE
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELS-SKNVVSWNTVIVGYENLGE 429
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/587 (34%), Positives = 333/587 (56%), Gaps = 33/587 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +F G I A +L++ M +D+ + ++I + G +D+AR +FDE
Sbjct: 144 WTVMFGGLIDGGRIDDARKLYDMMPG------KDVVASTNMIGGLCREGRVDEAREIFDE 197
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
M +RNV++WT +I+GY Q+ + +LF + + E S S+L+ L G++ A
Sbjct: 198 MRERNVITWTTMITGYGQNKRVDVARKLFEVMPE---KTEVSWTSMLLGYT-LSGRIEDA 253
Query: 128 LALKFSLDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ +A NA+I + +A +VF+ ME R+ +W MI A+ E
Sbjct: 254 EEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFEL 313
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+A+ELFA Q+QR+G+ P + + +L CA L + ++ VH+ + +
Sbjct: 314 EALELFA-------------QMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
F+ D +A+ L+ Y +CG + +K VFD+ D++ WNSI+ YA HG +EAL++F
Sbjct: 361 QFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVF 420
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M P+ T +++L+ACS+ G ++EG ++F SM V P ++HY+C VD+LGR
Sbjct: 421 HEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGR 480
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G++ +A +LI M ++PD+ +W LLG+C+ H LAE+AA KL ++EP ++ ++ +
Sbjct: 481 AGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILL 540
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR-HPQREAIFKK 481
S+I + +RK M+ V K+PG SWIE+ +VH F GG R HP++ I
Sbjct: 541 SSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMM 600
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
LE+ G L+ GY P+ S LHD++EE K + L HSE+LA+ + ++ E IR
Sbjct: 601 LEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLK----LPEGVPIR 656
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+MKN+R+C DCH +KL S + +EI++RD+NRFHHF + CSC DY
Sbjct: 657 VMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 178/391 (45%), Gaps = 61/391 (15%)
Query: 30 HMINNFPNEPQDLFVT---------NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
+ N P E + +F N L++ Y K +++AR++F+ MP+RNVVSWTA++
Sbjct: 58 YFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMV 117
Query: 81 SGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYV 140
GY Q G E LF + + NE S +V+ G++ A L + V
Sbjct: 118 KGYVQEGMVVEAELLFWRMPER---NEVSW-TVMFGGLIDGGRIDDARKLYDMMPGKDVV 173
Query: 141 ANALINMYSKSC----ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
A+ NM C DEA ++F+ M RNVI+W +MI + K A +LF M
Sbjct: 174 AST--NMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPE 231
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE----DDTV 252
+ E W + ++ +G + + A+ FE +
Sbjct: 232 KTEV--------------SWTSM-LLGYTLSGRIED----------AEEFFEVMPMKPVI 266
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
NA+I A G I +++VFD+M D +W ++KAY G EAL+LF+ M
Sbjct: 267 ACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQG 326
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH----YACMVDLLGRVGR 365
V+P + +S+LS C+ +Q G +V H+ H V Q D + ++ + + G
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQV-HA----HLVRCQFDGDVYVASVLMTMYVKCGE 381
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+++A+ + P + D ++W+ ++ HG
Sbjct: 382 LVKAKLVFDRFPSK-DIIMWNSIISGYASHG 411
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 158/367 (43%), Gaps = 70/367 (19%)
Query: 49 INMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF 108
I+ ++ G +++AR FD + + + SW +++SGY +G E ++F +E
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMF---------DEM 74
Query: 109 SLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNV 168
+++ + G Y+ N +I +EA VFE M RNV
Sbjct: 75 PERNIVSWNGLVSG----------------YIKNRMI--------EEARNVFEIMPERNV 110
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKM--KNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+SW +M+ + + +A LF +M +NE +F L G D
Sbjct: 111 VSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDD----------- 159
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
A ++ ++ D V + +I R G + ++++FD+M ++++W
Sbjct: 160 --------ARKLYDMMPG----KDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWT 207
Query: 287 SILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
+++ Y + + A +LF M + ++ S+L + +G +++ + F V
Sbjct: 208 TMITGYGQNKRVDVARKLFEVMP-EKTEVSWTSMLLGYTLSGRIEDAEEFFE-------V 259
Query: 347 VPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG-ETRLAEL 403
+P AC M+ LG VG I++A ++ +M + D+ W ++ + + G E EL
Sbjct: 260 MPMKPVIACNAMIVALGEVGEIVKARRVFDQME-DRDNATWRGMIKAYERKGFELEALEL 318
Query: 404 AATKLKQ 410
A +Q
Sbjct: 319 FAQMQRQ 325
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 241 LIAKYGFEDDTVIANAL-IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
LI + T + N+ I +R G I+ +++ FD + Y + SWNSI+ Y +G +
Sbjct: 6 LILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPR 65
Query: 300 EALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
EA Q+F M + + ++ L+S +++E VF M E + V + MV
Sbjct: 66 EARQMFDEMP-ERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVV-----SWTAMVKG 119
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG-DSLG 418
+ G ++EAE L MP E + V W+V+ G G R+ + A KL + PG D +
Sbjct: 120 YVQEGMVVEAELLFWRMP-ERNEVSWTVMFGGLIDGG--RIDD--ARKLYDMMPGKDVVA 174
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMK 443
M C G ++AR I EM+
Sbjct: 175 STNMIGGLCREGRVDEAREIFDEMR 199
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 325/562 (57%), Gaps = 32/562 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
V N LI Y+K G+L +AR +F + + R+ VSW +++ Y QH + L+ + ++
Sbjct: 175 VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVR 234
Query: 102 YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK--SCADE 155
+ F+LASVL + D L G HA +K + +V + LI++YSK C +
Sbjct: 235 GLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD 294
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
KVF+ + +++ WN+MI+ + L+ + +EAL FRQLQ G PD
Sbjct: 295 CRKVFDEISNPDLVLWNTMISGY----------SLYEDL--SDEALECFRQLQVVGHRPD 342
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQVF 274
C+ V+ AC+ + + VH L K + + + NALI Y++CG++ +K +F
Sbjct: 343 DCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLF 402
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M H+ VS+NS++ YA HG ++L LF M P + TF+S+L+AC+H G V+
Sbjct: 403 DTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVE 462
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G F+ M + G+ P+ H++CM+DLLGR G++ EAE+LI +P +P WS LLG+
Sbjct: 463 DGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGA 522
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR HG LA AA +L QL+P ++ +V ++NIY +G A +RK M+ V+K P
Sbjct: 523 CRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKP 582
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL----HDIEE 507
G SWIE+ R+H F + HP + I + LEE++ ++K +GY PE AL + +
Sbjct: 583 GCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQ 642
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
+E +L HHSEKLA+ F +M+ RE I + KN+RICVDCHN +K S+++ +EI
Sbjct: 643 REEELRLGHHSEKLAVSFGLMST----REGEPILVFKNLRICVDCHNAIKYISEVVKREI 698
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
VRDS+RFH FKD CSC YW
Sbjct: 699 TVRDSHRFHCFKDGQCSCGGYW 720
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 201/373 (53%), Gaps = 38/373 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++F N LI+ YAK Y++ A LFDEMP+ + VS+ LI+ YA+ G+ + F+LF +
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 101 QYFFP-NEFSLASVLISCDYLHG--KLVHALALKFSLDAHVYVANALINMYSKSC-ADEA 156
+ F + F+L+ ++ +C G + +HAL++ LD++V V NALI YSK+ EA
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 157 WKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
++F + E R+ +SWNSM+ A+ + ++A+EL+ +M G+ D
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMT-------------VRGLIVD 239
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS-KQVF 274
T + VL A + H+ + K G+ ++ + + LI Y++CG L ++VF
Sbjct: 240 IFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVF 299
Query: 275 DKMTYHDLVSWNSILKAYALHGQ-AKEALQLFSNMNV---QPDSATFVSLLSACSHAGLV 330
D+++ DLV WN+++ Y+L+ + EAL+ F + V +PD + V ++SACS+
Sbjct: 300 DEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSP 359
Query: 331 QEGNKVFHSMLENHGVVPQLDHYA-------CMVDLLGRVGRILEAEKLIREMPMEPDSV 383
+G +V HG+ +LD + ++ + + G + +A+ L MP E ++V
Sbjct: 360 SQGRQV-------HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTV 411
Query: 384 IWSVLLGSCRKHG 396
++ ++ +HG
Sbjct: 412 SYNSMIAGYAQHG 424
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 159/324 (49%), Gaps = 43/324 (13%)
Query: 96 FCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
F SLL F +F L + + D GK +HAL +K + Y++N + +YSK C
Sbjct: 4 FSSLLHNF--RQF-LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSK-CRRL 59
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK------------------ 195
A +VF++ NV S+N++I+A+ A +LF +M
Sbjct: 60 SAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRG 119
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACA---GLVTERHASAVHSLIAKYGFEDDTV 252
+ + A LF +++ + D T S ++ AC GL+ + HA +V + G +
Sbjct: 120 DTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVT-----GLDSYVS 174
Query: 253 IANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKAYALHGQAKEALQLFSNMNVQ 311
+ NALI +Y++ G + ++++F ++ D VSWNS++ AY H + +AL+L+ M V+
Sbjct: 175 VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVR 234
Query: 312 P---DSATFVSLLSACSHAGLVQE--GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR- 365
D T S+L+A ++ VQ+ G FH+ L G + ++DL + G
Sbjct: 235 GLIVDIFTLASVLTAFTN---VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGC 291
Query: 366 ILEAEKLIREMPMEPDSVIWSVLL 389
+L+ K+ E+ PD V+W+ ++
Sbjct: 292 MLDCRKVFDEIS-NPDLVLWNTMI 314
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F LK C R ++H+L K T ++N + Y++C +S +++VFD
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
++ S+N+++ AYA + A QLF M QPDS ++ +L++A + G Q ++F
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMP-QPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 339 SMLE-------------------NHGVVPQ---------LDHYACMVDLL----GRVGRI 366
M E N G++ Q LD Y + + L + G +
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFL 189
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
EA ++ + + D V W+ ++ + +H E
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHRE 220
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/588 (35%), Positives = 325/588 (55%), Gaps = 54/588 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y +C+ ++ +Q+H + + ++++V + I+MY++ G +DA +FD
Sbjct: 126 YPLALKSCSASKDLLLGLQIHSAVAKLRLD--RNVYVAHSAISMYSRCGRPEDAYRVFDG 183
Query: 68 MPKRNVVSWTALISGYAQHG---NAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL 124
MP R+VVSW A+I+G+A+ G A E F+ F +LQ P+ ++A +L +
Sbjct: 184 MPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFV-VLQGSMPDAGTMAGILPA-------- 234
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
+ NA +VF+NM+F+ +ISWN+M+A + +
Sbjct: 235 ---------------MGNA-----KPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFH 274
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+A+ELF M+ +E + PD T + VL C L +H +I +
Sbjct: 275 VKAVELFMLMEKDE-------------VEPDSITLATVLPPCGELSAFSVGKRIHEIIKR 321
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
+ ++ NAL+ YA CG + ++++FD M+ D++SW SI+ AY HG +EA+ L
Sbjct: 322 KNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDL 381
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M ++PDS FV++L+ACSHAGL+ +G F SM + ++P+ +HY CMVDLLG
Sbjct: 382 FEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLG 441
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G I EA I M +EP+ +W LL +CR H + +AA L L P + +V
Sbjct: 442 RAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVL 501
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SN+Y +G + +R M ++K+PG S +E+ ++VH F G + HPQ E I+ K
Sbjct: 502 LSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHK 561
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L+EL+G+++GMGY PE LHD+EEE KE+ L HSEKLA+ F ++N ++IR
Sbjct: 562 LDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTS----PGTIIR 617
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ N+R C DCH KL S + +EIV++D+NR HH +CSC DYW
Sbjct: 618 VTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/593 (35%), Positives = 342/593 (57%), Gaps = 28/593 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHM-INNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
T+ AC+ ++ +H + ++ F +E L V N ++ MY + G +++AR +FD M
Sbjct: 165 TILSACSSPALVQDGRMIHSCIALSGFESE---LLVANAVMTMYGRCGAVEEARKVFDAM 221
Query: 69 PK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC----DYLHG 122
+ R+VVSW ++S Y + ++ +L+ + P++ + S+L +C D G
Sbjct: 222 DEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM--QLRPDKVTYVSLLSACSSAEDVGLG 279
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+++H + L+ +V V NAL++MY+K + EA VF+ ME R++ISW ++I+A+
Sbjct: 280 RVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRR 339
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+L A+A LF +M L L + + + PD F +L ACA + V
Sbjct: 340 RLVAEACHLFQQM------LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ 393
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKE 300
A G D + A+++ Y +CG I ++++FD + + D+ WN+++ YA GQ+ E
Sbjct: 394 AASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHE 453
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML-ENHGVVPQLDHYACM 356
AL+LF M V+PDS +FVS+L ACSH GL +G F SM E V + H+ C+
Sbjct: 454 ALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCV 513
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
DLLGR GR+ EAE+ + ++P++PD+V W+ LL +CR H + + A+ A KL +LEP +
Sbjct: 514 ADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCA 573
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
G+V +SNIY ++ +RK M V+K G+S IEI +H+FA+G HP+
Sbjct: 574 TGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNR 633
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I ++L +L Q+K GYVP+T + LH ++E+ KE L+ HSE+LA+ +++
Sbjct: 634 EIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPL---- 689
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R+ KN+R+C DCH KL S + G++IVVRD RFH FKD CSC DYW
Sbjct: 690 GTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 217/437 (49%), Gaps = 43/437 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ T +C +++ +++H+ ++++ +P+ V+N L+NMY K G L A+ +F
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPK---VSNALLNMYKKCGSLSHAKRVFA 117
Query: 67 EMPK-RNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCD----YL 120
+M + RNV+SW+ + +A HGN E R F LL + ++ ++L +C
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENME--FRNVISWNSMIAA 177
G+++H+ ++ + VANA++ MY + A +EA KVF+ M+ R+V+SWN M++
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ AI+L+ +M+ + PD T+ +L AC+
Sbjct: 238 YVHNDRGKDAIQLYQRMQ----------------LRPDKVTYVSLLSACSSAEDVGLGRV 281
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H I E + ++ NAL+ YA+CGS + ++ VFDKM ++SW +I+ AY
Sbjct: 282 LHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRL 341
Query: 298 AKEALQLFSNM----------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
EA LF M V+PD+ FV++L+AC+ +++G K+ + G+
Sbjct: 342 VAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLS 400
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR--LAELAA 405
+V+L G+ G I EA ++ + PD +W+ ++ + G++ L
Sbjct: 401 SDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWR 460
Query: 406 TKLKQLEPGDSLGFVQM 422
+++ + P DS FV +
Sbjct: 461 MEMEGVRP-DSFSFVSI 476
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 196/409 (47%), Gaps = 34/409 (8%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFS 109
MYA DA+ FD + +RN+ SWT L++ +A G ++E R + Q P+ +
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 110 LASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENME 164
+ L SC G +H + + L+ V+NAL+NMY K + A +VF ME
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 165 -FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
RNVISW+ M A A N EAL FR + G+ +L
Sbjct: 121 RTRNVISWSIMAGA-------------HALHGNVWEALRHFRFMLLLGIKATKSAMVTIL 167
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM--TYHD 281
AC+ + +HS IA GFE + ++ANA++ Y RCG++ +++VFD M D
Sbjct: 168 SACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRD 227
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
+VSWN +L Y + + K+A+QL+ M ++PD T+VSLLSACS A V G +V H +
Sbjct: 228 VVSWNIMLSTYVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLG-RVLHKQI 286
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRK------ 394
N + + +V + + G EA + + ME S+I W+ ++ + +
Sbjct: 287 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDK--MEQRSIISWTTIISAYVRRRLVAE 344
Query: 395 --HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
H ++ EL Q D+L FV + N + + +++ ++
Sbjct: 345 ACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ 393
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 162/335 (48%), Gaps = 26/335 (7%)
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A F+ +E RN+ SW ++AAF A +E L +++++G+ P
Sbjct: 10 DAKAAFDALEQRNLYSWTGLVAAF-------------AISGQSKETLRALERMRQDGVRP 56
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D TF L +C + R +H ++ E D ++NAL++ Y +CGS+S +K+VF
Sbjct: 57 DAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVF 116
Query: 275 DKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
KM +++SW+ + A+ALHG EAL+ F M ++ + V++LSACS LV
Sbjct: 117 AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALV 176
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME-PDSVIWSVLL 389
Q+G ++ HS + G +L ++ + GR G + EA K+ M D V W+++L
Sbjct: 177 QDG-RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML 235
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
S H + + + QL P D + +V + + + R++ K++ + K
Sbjct: 236 -STYVHNDRGKDAIQLYQRMQLRP-DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEK 293
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
+ + N + + H + A+F K+E+
Sbjct: 294 N-----VIVGNALVSMYAKCGSHTEARAVFDKMEQ 323
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/575 (38%), Positives = 321/575 (55%), Gaps = 33/575 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+ N L++MY K G + AR +FDE +N+V + ++S Y H A + + +LQ
Sbjct: 267 IMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQK 326
Query: 103 F-FPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEA- 156
P++ ++ S + +C D GK HA L+ L+ ++NA+I+MY K EA
Sbjct: 327 GPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAA 386
Query: 157 WKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNE------------------ 197
KVFE+M + V++WNS+IA R +E A +F +M
Sbjct: 387 CKVFEHMPNKTVVTWNSLIAGLVRDGDMEL-AWRIFDEMLERDLVSWNTMIGALVQVSMF 445
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
EEA+ LFR++Q +G+ D T + AC L A V + I K D + AL
Sbjct: 446 EEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTAL 505
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
+ ++RCG S + VF +M D+ +W + + A+ G + A++LF+ M V+PD
Sbjct: 506 VDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDD 565
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
FV+LL+ACSH G V +G ++F SM + HG+ P + HY CMVDLLGR G + EA LI+
Sbjct: 566 VVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQ 625
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
MP+EP+ V+W LL +CRKH LA AA KL QL P V +SNIY +G +
Sbjct: 626 SMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTD 685
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
+R +MK V+K PG S IE++ +HEF SG + H + I LEE+ +L GY
Sbjct: 686 VARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGY 745
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
VP+T+ L D++E+ KE L HSEKLA+ + ++ G + IR++KN+R+C DCH+
Sbjct: 746 VPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTG----QGIPIRVVKNLRMCSDCHS 801
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
F KL S L +EI VRD+NR+H FK+ CSC DYW
Sbjct: 802 FAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 190/399 (47%), Gaps = 35/399 (8%)
Query: 20 NIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYL---DDARHLF--DEMPKRN 72
+K+ QLH M+ ++P N LI + G L D AR+ F D+ +
Sbjct: 37 TLKELKQLHCDMMKKGLLCHKPASNL--NKLIASSVQIGTLESLDYARNAFGDDDGNMAS 94
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HGKLVHA 127
+ + LI GYA G ++ L+ +L P++++ +L +C + G VH
Sbjct: 95 LFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHG 154
Query: 128 LALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
LK L+ ++V+N+LI+ Y++ C D K+F+ M RNV+SW S+I + L
Sbjct: 155 AVLKMGLEGDIFVSNSLIHFYAE-CGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLS- 212
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+EA+ LF Q+ G+ P+ T V+ ACA L V S I++
Sbjct: 213 ------------KEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISEL 260
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G E T++ NAL+ Y +CG I ++Q+FD+ +LV +N+I+ Y H A + L +
Sbjct: 261 GMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVIL 320
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M +PD T +S ++AC+ G + G K H+ + +G+ + ++D+ +
Sbjct: 321 DEMLQKGPRPDKVTMLSTIAACAQLGDLSVG-KSSHAYVLRNGLEGWDNISNAIIDMYMK 379
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G+ A K+ MP V W+ L+ + G+ LA
Sbjct: 380 CGKREAACKVFEHMP-NKTVVTWNSLIAGLVRDGDMELA 417
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL + L++M+++ G A H+F M KR+V +WTA I A GN E LF +L
Sbjct: 498 DLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEML 557
Query: 101 -QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLD------AHVYVANALINMYSKS-C 152
Q P++ ++L +C + G + L +S++ H+ ++++ ++
Sbjct: 558 EQKVKPDDVVFVALLTACSH-GGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGL 616
Query: 153 ADEAWKVFENMEFR-NVISWNSMIAAFR 179
+EA + ++M N + W S++AA R
Sbjct: 617 LEEAVDLIQSMPIEPNDVVWGSLLAACR 644
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/542 (38%), Positives = 325/542 (59%), Gaps = 32/542 (5%)
Query: 57 YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVL- 114
YL R +F+ MPKR++VSW +ISG AQ+G E+ + + P+ F+L+SVL
Sbjct: 145 YLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLP 204
Query: 115 ISCDY---LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVIS 170
I +Y L GK +H A++ DA V++ ++LI+MY+K + D++ +VF + + IS
Sbjct: 205 IFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS 264
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
WNS+IA C +F +E L F+Q+ + P+ +FS ++ ACA L
Sbjct: 265 WNSIIAG---CVQNG----MF------DEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLT 311
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
T +H I + F+ + IA+AL+ YA+CG+I ++ +FDKM +D+VSW +++
Sbjct: 312 TLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIM 371
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
YALHG A +A+ LF M V+P+ F+++L+ACSHAGLV E K F+SM +++ ++
Sbjct: 372 GYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRII 431
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
P L+HYA + DLLGRVGR+ EA + I +M +EP +WS LL +CR H LAE + K
Sbjct: 432 PGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKK 491
Query: 408 LKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFAS 467
L ++P + +V +SNIY +G + AR +R M+ ++K P SWIEI+N+VH F +
Sbjct: 492 LFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVA 551
Query: 468 GGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAI 527
G K HP + I + L+ L+ Q++ GYV +T+ LHD+EEE K L HSE+LA+ F I
Sbjct: 552 GDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGI 611
Query: 528 MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCND 587
++ + + IR+ KN+R+CVDCH K S ++G+EIV F+ F D + N
Sbjct: 612 ISTPA----GTTIRVTKNLRVCVDCHTATKFISKIVGREIV------FYFFLDEVGVLNV 661
Query: 588 YW 589
W
Sbjct: 662 KW 663
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 176/363 (48%), Gaps = 61/363 (16%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ + ++H + I N D+F+ + LI+MYAK +DD+ +F +P+ + +SW ++
Sbjct: 211 NLLKGKEIHGYAIRN--GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 268
Query: 80 ISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
I+G Q+G +E + F +L PN S +S++ +C +L GK +H ++
Sbjct: 269 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 328
Query: 135 DAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
D +V++A+AL++MY+K C + A +F+ ME +++SW +MI + L A
Sbjct: 329 DGNVFIASALVDMYAK-CGNIRTARWIFDKMELYDMVSWTAMIMGY---ALHGHAY---- 380
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDD 250
+A+ LF++++ EG+ P++ F VL AC AGLV E
Sbjct: 381 ------DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDE------------------ 416
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
A+ S++ ++ + ++ V+ G+ +EA + S+M++
Sbjct: 417 ---------AWKYFNSMTQDYRIIPGLEHYAAVA-----DLLGRVGRLEEAYEFISDMHI 462
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ-LDHYACMVDLLGRVGRILEA 369
+P + + +LL+AC ++ KV + V PQ + Y + ++ GR +A
Sbjct: 463 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFT---VDPQNIGAYVLLSNIYSAAGRWKDA 519
Query: 370 EKL 372
KL
Sbjct: 520 RKL 522
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 50/223 (22%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ ACA + QLH ++I + + ++F+ + L++MYAK G + AR +FD+
Sbjct: 300 FSSIMPACAHLTTLHLGKQLHGYIIRSRFD--GNVFIASALVDMYAKCGNIRTARWIFDK 357
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLVH 126
M ++VSWTA+I GYA HG+A + LF + ++ PN + +VL +C H LV
Sbjct: 358 MELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS--HAGLV- 414
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACK-LE- 184
DEAWK F NSM +R LE
Sbjct: 415 ---------------------------DEAWKYF-----------NSMTQDYRIIPGLEH 436
Query: 185 -AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
A +L ++ EEA + E W T +L AC
Sbjct: 437 YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWST---LLAAC 476
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/600 (35%), Positives = 336/600 (56%), Gaps = 31/600 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLD 59
F+ + + T A G A +H ++ + +P+ V L+ +Y + G +
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR---VGVGLLQLYTQLGDMS 299
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD 118
DA +F+EMPK +VV W+ +I+ + Q+G E LF + + F PNEF+L+S+L C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 119 YLH----GKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWN 172
G+ +H L +K D +YV+NALI++Y+K C D A K+F + +N +SWN
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAK-CEKMDTAVKLFAELSSKNEVSWN 418
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
++I + + +A +FR+ R ++ TFS L ACA L +
Sbjct: 419 TVIVGYE-------------NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH L K ++N+LI YA+CG I ++ VF++M D+ SWN+++ Y
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ HG ++AL++ M + +P+ TF+ +LS CS+AGL+ +G + F SM+ +HG+ P
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
L+HY CMV LLGR G++ +A KLI +P EP +IW +L + A +A ++
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
++ P D +V +SN+Y + + IRK MK V+K PGLSWIE + VH F+ G
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGL 705
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
HP + I LE L + GYVP+ + L D+++E K+++L+ HSE+LAL + ++
Sbjct: 706 SDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVR 765
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S R+ I IMKN+RIC DCH+ MK+ S ++ +++V+RD NRFHHF +CSC D+W
Sbjct: 766 MPS---SRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 44/374 (11%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL----- 95
DLF TN L+N Y K G+ DA +LFDEMP+RN VS+ L GYA RL
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 96 ------FCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYS 149
F S L+ F SL I C +LH +V K D++ +V ALIN YS
Sbjct: 143 ELNPHVFTSFLKLFV----SLDKAEI-CPWLHSPIV-----KLGYDSNAFVGAALINAYS 192
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
D A VFE + ++++ W A +C +E E ++L L ++
Sbjct: 193 VCGSVDSARTVFEGILCKDIVVW----AGIVSCYVENGYFE---------DSLKLLSCMR 239
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G P+ TF LKA GL A VH I K + D + L+ Y + G +S
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACS 325
+ +VF++M +D+V W+ ++ + +G EA+ LF M V P+ T S+L+ C+
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEAEKLIREMPMEPDSV 383
G ++ H ++ G LD Y ++D+ + ++ A KL E+ + V
Sbjct: 360 IGKCSGLGEQL-HGLVVKVGF--DLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEV 415
Query: 384 IWSVLLGSCRKHGE 397
W+ ++ GE
Sbjct: 416 SWNTVIVGYENLGE 429
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIA 176
D + K +H LK ++ N L+N Y K+ D +A +F+ M RN +S+ ++
Sbjct: 64 DPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQ 123
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ AC ++ + L+ +L REG + F+ LK L
Sbjct: 124 GY-AC----------------QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+HS I K G++ + + ALI+AY+ CGS+ ++ VF+ + D+V W I+ Y +G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 297 QAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV-PQLDH 352
+++L+L S M + P++ TF + L A G V +L+ V+ P++
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG- 285
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ L ++G + +A K+ EMP + D V WS ++ ++G
Sbjct: 286 -VGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQNG 327
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 331/591 (56%), Gaps = 28/591 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+L A HG + Q +H + + + + + L++MYAK L A +F M
Sbjct: 207 SLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGM 266
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYLHG 122
P RN V+W+ALI G+ E F LF +L F + S+AS L C D G
Sbjct: 267 PVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMG 326
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HAL K + A + +N+L++MY+K+ +EA F+ + ++ IS+ ++++ C
Sbjct: 327 TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSG---C 383
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+A EEA +F+++Q M PD T ++ AC+ L +H H
Sbjct: 384 VQNGKA----------EEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGS 433
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ G +T I N+LI YA+CG I LS+QVFDKM D+VSWN+++ Y +HG KEA
Sbjct: 434 VIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LF M Q PD TF+ L++ACSH+GLV EG F +M +G++P+++HY CMVD
Sbjct: 494 TTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVD 553
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LL R G + EA + I+ MP++ D +W LLG+CR H L + + +++L P +
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGN 613
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
FV +SNI+ +G F++A +R K +K PG SWIEI +H F G + HP I
Sbjct: 614 FVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDI 673
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +L+ ++ +K +GY +TS L D+EEE KE+ L +HSEKLA+ F +++ E
Sbjct: 674 YHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLS----LNEDK 729
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I + KN+R+C DCH +K + + + I+VRD+NRFHHFK+ CSC ++W
Sbjct: 730 TIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 181/370 (48%), Gaps = 29/370 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV+ LI++Y + AR++F +MP R+VV+W A+++GYA HG +
Sbjct: 134 DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQ 193
Query: 101 QY--FFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAH---VYVANALINMYSKS 151
+ PN +L S+L G +HA L+ L+ + V + AL++MY+K
Sbjct: 194 DHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAK- 252
Query: 152 CAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C A +VF M RN ++W+++I F C +A LF M E
Sbjct: 253 CKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFL------- 305
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ + L+ CA L + +H+LIAK G D +N+L+ YA+ G I+
Sbjct: 306 -----SATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINE 360
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ FD++ D +S+ ++L +G+A+EA +F M N++PD AT VSL+ ACSH
Sbjct: 361 ATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSH 420
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+Q G K H + G+ + ++D+ + G+I + ++ +MP D V W+
Sbjct: 421 LAALQHG-KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWN 478
Query: 387 VLLGSCRKHG 396
++ HG
Sbjct: 479 TMIAGYGIHG 488
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 24 AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
A +LH + E +D + + G L AR +FD +P + ++ ALI Y
Sbjct: 16 AARLHRPPSGSISYEVKDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAY 75
Query: 84 AQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHV 138
+ G L+ S+L++ PN+++ VL +C D G+ +HA A L +
Sbjct: 76 SWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDL 135
Query: 139 YVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
+V+ ALI++Y + CA A VF M R+V++WN+M+A + + AI M++
Sbjct: 136 FVSTALIDLYIR-CARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQD 194
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF---EDDTVI 253
G+ P+ T +L A +++H+ + E+ +I
Sbjct: 195 H------------GGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLI 242
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP- 312
AL+ YA+C + + +VF M + V+W++++ + L + EA LF +M V+
Sbjct: 243 GTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGL 302
Query: 313 ---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ + S L C+ + G ++ H+++ G+ L ++ + + G I EA
Sbjct: 303 CFLSATSVASALRVCASLADLHMGTQL-HALIAKSGIHADLTASNSLLSMYAKAGLINEA 361
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK--QLEP 413
E+ ++ D++ + LL C ++G+ A L K++ +EP
Sbjct: 362 TMFFDEIAVK-DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 331/591 (56%), Gaps = 28/591 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+L A HG + Q +H + + + + + L++MYAK L A +F M
Sbjct: 207 SLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGM 266
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYLHG 122
P RN V+W+ALI G+ E F LF +L F + S+AS L C D G
Sbjct: 267 PVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMG 326
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HAL K + A + +N+L++MY+K+ +EA F+ + ++ IS+ ++++ C
Sbjct: 327 TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSG---C 383
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+A EEA +F+++Q M PD T ++ AC+ L +H H
Sbjct: 384 VQNGKA----------EEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGS 433
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ G +T I N+LI YA+CG I LS+QVFDKM D+VSWN+++ Y +HG KEA
Sbjct: 434 VIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LF M Q PD TF+ L++ACSH+GLV EG F +M +G++P+++HY CMVD
Sbjct: 494 TTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVD 553
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LL R G + EA + I+ MP++ D +W LLG+CR H L + + +++L P +
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGN 613
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
FV +SNI+ +G F++A +R K +K PG SWIEI +H F G + HP I
Sbjct: 614 FVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDI 673
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ +L+ ++ +K +GY +TS L D+EEE KE+ L +HSEKLA+ F +++ E
Sbjct: 674 YHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLS----LNEDK 729
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I + KN+R+C DCH +K + + + I+VRD+NRFHHFK+ CSC ++W
Sbjct: 730 TIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 181/370 (48%), Gaps = 29/370 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV+ LI++Y + AR++F +MP R+VV+W A+++GYA HG +
Sbjct: 134 DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQ 193
Query: 101 QY--FFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAH---VYVANALINMYSKS 151
+ PN +L S+L G +HA L+ L+ + V + AL++MY+K
Sbjct: 194 DHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAK- 252
Query: 152 CAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C A +VF M RN ++W+++I F C +A LF M E
Sbjct: 253 CKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFL------- 305
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ + L+ CA L + +H+LIAK G D +N+L+ YA+ G I+
Sbjct: 306 -----SATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINE 360
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ FD++ D +S+ ++L +G+A+EA +F M N++PD AT VSL+ ACSH
Sbjct: 361 ATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSH 420
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+Q G K H + G+ + ++D+ + G+I + ++ +MP D V W+
Sbjct: 421 LAALQHG-KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWN 478
Query: 387 VLLGSCRKHG 396
++ HG
Sbjct: 479 TMIAGYGIHG 488
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 24 AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
A +LH + E +D + + G L AR +FD +P + ++ ALI Y
Sbjct: 16 AARLHRPPSGSISYEVKDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAY 75
Query: 84 AQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHV 138
+ G L+ S+L++ PN+++ VL +C D G+ +HA A L +
Sbjct: 76 SWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDL 135
Query: 139 YVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
+V+ ALI++Y + CA A VF M R+V++WN+M+A + + AI M++
Sbjct: 136 FVSTALIDLYIR-CARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQD 194
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF---EDDTVI 253
G+ P+ T +L A +++H+ + E+ +I
Sbjct: 195 H------------GGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLI 242
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP- 312
AL+ YA+C + + +VF M + V+W++++ + L + EA LF +M V+
Sbjct: 243 GTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGL 302
Query: 313 ---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ + S L C+ + G ++ H+++ G+ L ++ + + G I EA
Sbjct: 303 CFLSATSVASALRVCASLADLHMGTQL-HALIAKSGIHADLTASNSLLSMYAKAGLINEA 361
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK--QLEP 413
E+ ++ D++ + LL C ++G+ A L K++ +EP
Sbjct: 362 TMFFDEIAVK-DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 316/546 (57%), Gaps = 39/546 (7%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFP--------NEF 108
L AR++F +P + +++ +I ++ R F S L YFF + F
Sbjct: 38 LSYARYVFSRIPSPDTIAYNTIIRSHS---------RFFPSHSLSYFFSMRSNGIPLDNF 88
Query: 109 SLASVLISCDYLHGKL-VHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFR 166
+ VL +C L L +H+L +K+ L + ++V NALI +Y + E A KVF+ M R
Sbjct: 89 TFPFVLKACSRLQINLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSER 148
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+ +SW+++IA+F ++A++LF KM+ E++ + PD T V+ A
Sbjct: 149 DSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVV------------PDEVTMLSVISAI 196
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
+ L V + I + GF + ALI ++RCGSI S VF+KM ++++W
Sbjct: 197 SHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWT 256
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
+++ +HG++ EAL +F +M VQPD TF +L ACSH GLV+EG +F S+ +
Sbjct: 257 ALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKV 316
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL 403
+G+ P LDHY CMVD+LGR G + EA + MPM+P+S+IW LLG+C H LAE
Sbjct: 317 YGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEK 376
Query: 404 AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVH 463
K+ ++ + V +SN+Y +G + + IR +M+ R+ K PG S I ++ +H
Sbjct: 377 VKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIH 436
Query: 464 EFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLAL 523
EF SG HPQ E I K L +IG L+ GY+ +T LHDIEEE +E L +HSEKLA+
Sbjct: 437 EFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAV 496
Query: 524 VFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRIC 583
FAI++ +++ IRIMKN+RIC DCH+FMK S ++I++RD NRFHHF+ +C
Sbjct: 497 AFAILSM----KDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLC 552
Query: 584 SCNDYW 589
SC+DYW
Sbjct: 553 SCHDYW 558
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 24/281 (8%)
Query: 25 MQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYA 84
+ LH H + D+FV N LI +Y G L+ A +FDEM +R+ VSW+ +I+ +
Sbjct: 102 INLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFL 161
Query: 85 QHGNAEECFRLF--CSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHV 138
+G A E LF L P+E ++ SV+ + +L G+ V A + V
Sbjct: 162 NNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSV 221
Query: 139 YVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
+ ALI+M+S+ DE+ VFE M RNV++W ++I + +++
Sbjct: 222 ALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGL---GIHGRSM--------- 269
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL +F +++ G+ PD+ TFS VL AC+ GLV E S+ YG +
Sbjct: 270 -EALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKE-GWDIFESIRKVYGMDPLLDHYG 327
Query: 256 ALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALH 295
++ R G ++ + ++M + + W ++L A H
Sbjct: 328 CMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNH 368
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/670 (34%), Positives = 358/670 (53%), Gaps = 112/670 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ C+++ +++ Q+H H I + FV L++MYAK + +A +LF+
Sbjct: 141 WGSVLRVCSMYVLLEKGKQIHAHAIKT--QFDSNAFVVTGLVDMYAKCKCILEAEYLFEL 198
Query: 68 MP-KRNVVSWTALISGYAQHGN---AEECFR------LFCSLLQYFFPNEFSLASVLISC 117
P KRN V WTA+++GY+Q+G+ A ECFR + C+ Q+ FP+ + + +C
Sbjct: 199 APDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECN--QFTFPSILTACGSISAC 256
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
+ G VH ++ A+V+V +AL++MYSK C D A ++ E ME + +SWNSMI
Sbjct: 257 GF--GAQVHGCIVRSGFGANVFVGSALVDMYSK-CGDLSNARRMLETMEVDDPVSWNSMI 313
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
C + EEAL LFR + M D T+ VL + ++ R+A
Sbjct: 314 VG---CVRQGLG----------EEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNA 360
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+VHSLI K GFE ++ NAL+ YA+ G + VF+KMT D++SW S++ +
Sbjct: 361 MSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN 420
Query: 296 GQAKEALQLFSN---MNVQPDSATFVSLLSACS-----------HA-------------- 327
G +EAL+LF M + PD ++LSAC+ HA
Sbjct: 421 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVD 480
Query: 328 ----------GLVQEGNKVFHSM--------------------------LENHG------ 345
G +++ NKVF SM L HG
Sbjct: 481 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQS 540
Query: 346 ------VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
+ P +HYACM+DLLGR G+++EA++L+ +M ++PD+ +W LL +CR HG
Sbjct: 541 MEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVE 600
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
L E AA L +LEP +++ +V +SN+Y +G + +A R+ MK V K PG SWIE+
Sbjct: 601 LGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMS 660
Query: 460 NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSE 519
++VH F S + HP+ I+ K++E++ +K GYVP+ + ALHD++EE KE L +HSE
Sbjct: 661 SKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSE 720
Query: 520 KLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
KLA+ F ++ + IRI KN+RIC DCH MK S + + +++RDSN FHHF+
Sbjct: 721 KLAVAFGLLTM----PPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFR 776
Query: 580 DRICSCNDYW 589
+ CSC+DYW
Sbjct: 777 EGACSCSDYW 786
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 192/389 (49%), Gaps = 33/389 (8%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G + A +L + M + +D N +I YA G L++AR LF E P R+ ++W++
Sbjct: 55 GRVDDARKLFDVMPD------RDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSS 108
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYL----HGKLVHALALKF 132
LISGY ++G E LF +QY PN+F+ SVL C GK +HA A+K
Sbjct: 109 LISGYCRYGCDVEALELFWE-MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKT 167
Query: 133 SLDAHVYVANALINMYSK-SCADEAWKVFE-NMEFRNVISWNSMIAAFRACKLEAQAIEL 190
D++ +V L++MY+K C EA +FE + RN + W +M+
Sbjct: 168 QFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG------------- 214
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
+++ + +A+ FR ++ EG+ + TF +L AC + + VH I + GF +
Sbjct: 215 YSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGAN 274
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
+ +AL+ Y++CG +S ++++ + M D VSWNS++ G +EAL LF M++
Sbjct: 275 VFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHL 334
Query: 311 ---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
+ D T+ S+L+ S ++ V HS++ G +VD+ + G
Sbjct: 335 RHMKIDEFTYPSVLNCFSFVMDMRNAMSV-HSLIVKTGFEAYKLVNNALVDMYAKRGYFD 393
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
A + +M + D + W+ L+ C +G
Sbjct: 394 YAFDVFEKMT-DKDVISWTSLVTGCVHNG 421
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 30/278 (10%)
Query: 144 LINMYSKSCADEAWKVFENMEFRNVISWNSMIAAF------------------RACKLEA 185
L N+ D+A K+F+ M R+ SWN+MI A+ R+C +
Sbjct: 48 LSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWS 107
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
I + + + EAL LF ++Q EG P+ T+ VL+ C+ V +H+ K
Sbjct: 108 SLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKT 167
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVF----DKMTYHDLVSWNSILKAYALHGQAKEA 301
F+ + + L+ YA+C I ++ +F DK + V W +++ Y+ +G +A
Sbjct: 168 QFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNH---VLWTAMVTGYSQNGDGHKA 224
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++ F +M ++ + TF S+L+AC G +V H + G + + +VD
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQV-HGCIVRSGFGANVFVGSALVD 283
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + G + A +++ M ++ D V W+ ++ C + G
Sbjct: 284 MYSKCGDLSNARRMLETMEVD-DPVSWNSMIVGCVRQG 320
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 2 LHSTQIY-ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+H QI A + ACA ++ Q+H + + + L V N L++MYAK G ++D
Sbjct: 438 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS--GLGSSLSVDNSLVSMYAKCGCIED 495
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEE 91
A +FD M ++V++WTALI GYAQ+G +
Sbjct: 496 ANKVFDSMEIQDVITWTALIVGYAQNGRGRD 526
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 43/182 (23%)
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV--- 310
+N ++ ++CG + ++++FD M D SWN+++ AYA G+ EA +LF +
Sbjct: 44 SNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSC 103
Query: 311 -------------------------------QPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+P+ T+ S+L CS L+++G ++
Sbjct: 104 ITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQI--- 160
Query: 340 MLENHGVVPQLDHYA----CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
H + Q D A +VD+ + ILEAE L P + + V+W+ ++ ++
Sbjct: 161 --HAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQN 218
Query: 396 GE 397
G+
Sbjct: 219 GD 220
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/653 (34%), Positives = 341/653 (52%), Gaps = 87/653 (13%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T + AC G + A Q+H ++ + D+ + N LI+MY+K G L+ AR +
Sbjct: 775 TATIVRVLQACGKMGALNAAKQIHGYVFRFGLD--SDVSLCNPLISMYSKNGKLELARRV 832
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLF----------------CSLLQYFF---- 104
FD M RN SW ++IS YA G + + LF C L +F
Sbjct: 833 FDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYK 892
Query: 105 ----------------PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANAL 144
PN S+ SVL + L GK H L+ D VYV +L
Sbjct: 893 EEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 952
Query: 145 INMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFL 203
I+MY K+ A VF+NM+ RN+ +WNS+++ + F M E+AL L
Sbjct: 953 IDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYS-----------FKGM--FEDALRL 999
Query: 204 FRQLQREGMAPDWCTF------------------------SIVLKACAGLVTERHASAVH 239
Q+++EG+ PD T+ + +L+ACA L + +H
Sbjct: 1000 LNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIH 1059
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
L + GF +D +A ALI Y++ S+ + +VF ++ L SWN ++ +A+ G K
Sbjct: 1060 CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGK 1119
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ +F+ M V PD+ TF +LLSAC ++GL+ EG K F SM+ ++ +VP+L+HY CM
Sbjct: 1120 EAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCM 1179
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + EA LI MP++PD+ IW LLGSCR H AE AA L +LEP +S
Sbjct: 1180 VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNS 1239
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ M N+Y + + +R+ M + VR SWI+I RVH F+S K HP
Sbjct: 1240 ANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAG 1299
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ +L +L+ ++K +GYVP+ + +++E K++ L H+EKLA+ + ++ +
Sbjct: 1300 KIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKM----KA 1355
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN RIC DCH+ K S + +E+ +RD RFHHF++ CSCND+W
Sbjct: 1356 GEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 192/427 (44%), Gaps = 58/427 (13%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+++Y+ C +I M++H +I D+++ L+N Y + L+ A +
Sbjct: 674 SEVYSVALKTCTRVMDIWLGMEIHGCLIKR--GFDLDVYLRCALMNFYGRCWGLEKANQV 731
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF-SLASVLISCDYLH-- 121
F EMP + W I Q ++ LF + F E ++ VL +C +
Sbjct: 732 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF 178
K +H +F LD+ V + N LI+MYSK+ E A +VF++ME RN SWNSMI+++
Sbjct: 792 NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 851
Query: 179 RACKLEAQAIELFAKMKN----------------------EEEALFLFRQLQREGMAPDW 216
A A LF ++++ +EE L + +++Q EG P+
Sbjct: 852 AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 911
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
+ + VL+A + L H + + GF+ D + +LI Y + S+ ++ VFD
Sbjct: 912 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN 971
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ------------------------- 311
M ++ +WNS++ Y+ G ++AL+L + M +
Sbjct: 972 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031
Query: 312 --PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
P+SA+ LL AC+ L+Q+G ++ H + +G + + ++D+ + + A
Sbjct: 1032 FMPNSASITCLLRACASLSLLQKGKEI-HCLSIRNGFIEDVFVATALIDMYSKSSSLKNA 1090
Query: 370 EKLIREM 376
K+ R +
Sbjct: 1091 HKVFRRI 1097
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 158/360 (43%), Gaps = 51/360 (14%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F ++ ++ A + G + + H +++ N D++V LI+MY K L
Sbjct: 907 FKPNSSSMTSVLQAISELGFLNMGKETHGYVLRN--GFDCDVYVGTSLIDMYVKNHSLXS 964
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--------------------- 99
A+ +FD M RN+ +W +L+SGY+ G E+ RL +
Sbjct: 965 AQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAM 1024
Query: 100 ----LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS 151
+ F PN S+ +L +C L GK +H L+++ V+VA ALI+MYSKS
Sbjct: 1025 WGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKS 1084
Query: 152 CA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ A KVF ++ + + SWN MI F L +AI +F +M Q+
Sbjct: 1085 SSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEM-------------QKV 1131
Query: 211 GMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G+ PD TF+ +L AC +GL+ E S+I Y ++ R G +
Sbjct: 1132 GVGPDAITFTALLSACKNSGLIGE-GWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLD 1190
Query: 269 LSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM-NVQP-DSATFVSLLSACS 325
+ + M D W ++L + +H A N+ ++P +SA ++ +++ S
Sbjct: 1191 EAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYS 1250
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 144/330 (43%), Gaps = 28/330 (8%)
Query: 47 HLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE----ECFRLFCSLLQY 102
+LI+ Y FG A +F RN + W + + + + E F+
Sbjct: 612 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 671
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAW 157
F +S+A L +C D G +H +K D VY+ AL+N Y + ++A
Sbjct: 672 FDSEVYSVA--LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 729
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+VF M + WN +AI L + + ++ + LFR++Q + +
Sbjct: 730 QVFHEMPNPEALLWN-------------EAIILNLQSEKLQKGVELFRKMQFSFLKAETA 776
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T VL+AC + A +H + ++G + D + N LI Y++ G + L+++VFD M
Sbjct: 777 TIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 836
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+ SWNS++ +YA G +A LF + +++PD T+ LLS G +E
Sbjct: 837 ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVL 896
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
+ M + G P ++ + +G
Sbjct: 897 NILQRM-QGEGFKPNSSSMTSVLQAISELG 925
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 334/578 (57%), Gaps = 33/578 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+FV N LI+ Y G LD A +F + +++VVSW ++I+G+ Q G+ ++ LF +
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 100 LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
+ + ++ VL +C + G+ V + + ++ ++ +ANA+++MY+K + +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---------------- 198
+A ++F+ ME ++ ++W +M+ + + A E+ M ++
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 199 --EALFLFRQLQ-REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL +F +LQ ++ M + T L ACA + +HS I K+G + + +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALIH Y++CG + S++VF+ + D+ W++++ A+HG EA+ +F M NV+P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ TF ++ ACSH GLV E +FH M N+G+VP+ HYAC+VD+LGR G + +A K
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
I MP+ P + +W LLG+C+ H LAE+A T+L +LEP + V +SNIY G +
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
+RK M+ + ++K PG S IEI+ +HEF SG HP E ++ KL E++ +LK
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN 644
Query: 493 GYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GY PE S L IEEE KE+ L HSEKLA+ + +++ VIR++KN+R+C D
Sbjct: 645 GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIST----EAPKVIRVIKNLRVCGD 700
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH+ KL S L +EI+VRD RFHHF++ CSCND+W
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 213/455 (46%), Gaps = 69/455 (15%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSWT 77
+++Q Q H HMI D + + L M A F L+ AR +FDE+PK N +W
Sbjct: 42 SLRQLKQTHGHMIRT--GTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWN 99
Query: 78 ALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCDYLH----GKLVHALALK 131
LI YA + F ++ +PN+++ ++ + + G+ +H +A+K
Sbjct: 100 TLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
Query: 132 FSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
++ + V+VAN+LI+ Y SC D A KVF ++ ++V+SWNSMI
Sbjct: 160 SAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVVSWNSMING------------ 206
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
F + + ++AL LF++++ E + T VL ACA + V S I +
Sbjct: 207 -FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 250 DTVIANALIHAYARCGSISLSKQVFD-------------------------------KMT 278
+ +ANA++ Y +CGSI +K++FD M
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP----DSATFVSLLSACSHAGLVQEGN 334
D+V+WN+++ AY +G+ EAL +F + +Q + T VS LSAC+ G ++ G
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG- 384
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ HS ++ HG+ + ++ + + G + ++ ++ + + D +WS ++G
Sbjct: 385 RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAM 443
Query: 395 HGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYC 427
HG A K+++ ++P V +N++C
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNG----VTFTNVFC 474
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 23/327 (7%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC---ADEAWKVFENMEFRNVISWNSMIAAFR 179
K H ++ + Y A+ L M + S + A KVF+ + N +WN++I A+
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ +I F M +E + P+ TF ++KA A + + ++H
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCY------------PNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K D +AN+LIH Y CG + + +VF + D+VSWNS++ + G
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL+LF M +V+ T V +LSAC+ ++ G +V S +E + V L M
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEENRVNVNLTLANAM 273
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
+D+ + G I +A++L M E D+V W+ +L + + E A L + D
Sbjct: 274 LDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG---YAISEDYEAAREVLNSMPQKDI 329
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ + + + Y +G N+A ++ E++
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQ 356
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 147/329 (44%), Gaps = 59/329 (17%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD---- 66
+ ACA N++ Q+ ++ N N +L + N +++MY K G ++DA+ LFD
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVN--VNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 67 ---------------------------EMPKRNVVSWTALISGYAQHGNAEECFRLF--C 97
MP++++V+W ALIS Y Q+G E +F
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 98 SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L + N+ +L S L +C + G+ +H+ K + + +V +ALI+MYSK C
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK-CG 414
Query: 154 D--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D ++ +VF ++E R+V W++MI +A+++F KM Q
Sbjct: 415 DLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM-------------QEAN 461
Query: 212 MAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ P+ TF+ V AC+ GLV E S H + + YG + ++ R G +
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAE-SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 270 SKQVFDKMTYHDLVS-WNSILKAYALHGQ 297
+ + + M S W ++L A +H
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHAN 549
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 317/545 (58%), Gaps = 31/545 (5%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ----YFFPNEFSLASV 113
L AR LFD MP+R+ SW+A++S +A+HG ++ +L+ NEF+ +S
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSA 168
Query: 114 LISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRN 167
L + G+ +H ++ +DA V +AL +MY+K C D+A VF+ M R+
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAK-CGRVDDARSVFDRMPVRD 227
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
V+SW +M+ E + + + E LF ++ R G+ P+ T++ VL+ACA
Sbjct: 228 VVSWTAMV-------------ERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACA 274
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
+E+ VH + K D +AL+H Y++ G + + +VF M DLVSW +
Sbjct: 275 EFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTA 334
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++ YA +GQ EAL+ F + +PD TFV +LSAC+HAGLV +G +FHS+ + +
Sbjct: 335 MISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEY 394
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
G+ DHYAC++DLL R G AE++I M ++P+ +W+ LLG CR H RLA A
Sbjct: 395 GIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWA 454
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
A L ++EP + +V ++NIY G F++ R+ M+ + K P SWIE+ R+H
Sbjct: 455 AEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHV 514
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F G K HPQ E ++ L++L +++ GYV +T LHD+E+E K++ + +HSE+LA+
Sbjct: 515 FLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVA 574
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
F I+ + + I++ KN+RIC DCH +KL S ++ +EI+VRDSNRFHHFK+ CS
Sbjct: 575 FGIIATP----KGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCS 630
Query: 585 CNDYW 589
C DYW
Sbjct: 631 CRDYW 635
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 27/318 (8%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
+LH H++ + D V + L +MYAK G +DDAR +FD MP R+VVSWTA++ Y
Sbjct: 183 ELHCHVVRRGID--ADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFD 240
Query: 86 HGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYV 140
E FRLF +L+ PNEF+ A VL +C GK VH K +
Sbjct: 241 ARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFA 300
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
+AL++MYSK A +VF M +++SW +MI+ +A+ +E
Sbjct: 301 ESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISG-------------YAQNGQPDE 347
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
AL F L R G PD TF VL AC AGLV ++ S HS+ +YG E +
Sbjct: 348 ALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLV-DKGLSIFHSIKDEYGIEHTADHYACV 406
Query: 258 IHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM-NVQPDS- 314
I +R G ++++ + M+ + W S+L +H + A + ++P++
Sbjct: 407 IDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENP 466
Query: 315 ATFVSLLSACSHAGLVQE 332
AT+V+L + + GL E
Sbjct: 467 ATYVTLANIYASVGLFDE 484
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA + ACA + K Q+H M + + F + L++MY+K+G + A +F
Sbjct: 266 YAGVLRACAEFTSEKLGKQVHGRMTKSRAGD--SCFAESALVHMYSKYGDMGTAVRVFRG 323
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLHGKLV- 125
MPK ++VSWTA+ISGYAQ+G +E R F LL+ P+ + VL +C H LV
Sbjct: 324 MPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSAC--AHAGLVD 381
Query: 126 ------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAA 177
H++ ++ ++ +I++ S+S + A ++ M + N W S++
Sbjct: 382 KGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGG 441
Query: 178 FRA---CKLEAQAIELFAKMKNEEEALFL 203
R +L A E +++ E A ++
Sbjct: 442 CRIHKNVRLARWAAEALFEIEPENPATYV 470
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 332/595 (55%), Gaps = 28/595 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T +++ CA ++ + +H ++I + D+FV+N LINMY+KFG L DA+ +
Sbjct: 248 TVTVSSMLPICAQSNDVVGGVLVHLYVIKH--GLESDVFVSNALINMYSKFGRLQDAQRV 305
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF----SLASVLIS-CDY 119
FD M R++VSW ++I+ Y Q+ + F +L + SLAS+ D
Sbjct: 306 FDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDR 365
Query: 120 LHGKLVHALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
G+ VH ++ L+ + + NAL+NMY+K D A VFE + R+VISWN++I
Sbjct: 366 RIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITG 425
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L ++AI+ + M+ + + P+ T+ +L A + + +
Sbjct: 426 YAQNGLASEAIDAYNMME------------EGRTIVPNQGTWVSILPAYSHVGALQQGMK 473
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + K D +A LI Y +CG + + +F ++ V WN+I+ + +HG
Sbjct: 474 IHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGH 533
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
++ALQLF +M V+ D TFVSLLSACSH+GLV E F +M + + + P L HY
Sbjct: 534 GEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYG 593
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDL GR G + +A L+ MP++ D+ IW LL +CR HG L A+ +L +++
Sbjct: 594 CMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSE 653
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ +V +SNIY G + A +R + +RK PG S + + + V F +G + HPQ
Sbjct: 654 NVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQ 713
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I+++L L ++K +GYVP+ S L D+EE+ KEE L HSE+LA+VF I++
Sbjct: 714 CAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIIST---- 769
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+S IRI KN+R+C DCHN K S + +EI+VRDSNRFHHFKD ICSC DYW
Sbjct: 770 PPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 209/369 (56%), Gaps = 30/369 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D++V LI++Y++FG ++ A +F +MP R+V SW A+ISG+ Q+GN E R+ +
Sbjct: 181 DVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMK 240
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ + +++S+L C D + G LVH +K L++ V+V+NALINMYSK
Sbjct: 241 TEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQ 300
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A +VF+ ME R+++SWNS+IAA+ + + AL F+++ GM P
Sbjct: 301 DAQRVFDGMEVRDLVSWNSIIAAYE-------------QNDDPVTALGFFKEMLFVGMRP 347
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAK-YGFEDDTVIANALIHAYARCGSISLSKQV 273
D T + L R AVH + + E D VI NAL++ YA+ GSI ++ V
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGL 329
F+++ D++SWN+++ YA +G A EA+ ++ M + P+ T+VS+L A SH G
Sbjct: 408 FEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGA 467
Query: 330 VQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
+Q+G K+ +++N LD + C++D+ G+ GR+ +A L E+P E SV W+
Sbjct: 468 LQQGMKIHGRLIKN---CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET-SVPWNA 523
Query: 388 LLGSCRKHG 396
++ S HG
Sbjct: 524 IISSLGIHG 532
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 198/417 (47%), Gaps = 29/417 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +F +C NI A QLH ++ + QD+ + L+ +YA G L + F
Sbjct: 54 FNLVFRSCT---NINVAKQLHALLL--VLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKH 108
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL-HGKL 124
+ ++N+ SW +++S Y + G + LL P+ ++ VL +C L G+
Sbjct: 109 IQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEK 168
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKL 183
+H LK + VYVA +LI++YS+ A E A KVF +M R+V SWN+MI+ F
Sbjct: 169 MHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGN 228
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
A+A+ + +MK EE + D T S +L CA VH +
Sbjct: 229 VAEALRVLDRMKTEEVKM-------------DTVTVSSMLPICAQSNDVVGGVLVHLYVI 275
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
K+G E D ++NALI+ Y++ G + +++VFD M DLVSWNSI+ AY + AL
Sbjct: 276 KHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALG 335
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F M ++PD T VSL S + G V ++ + + +V++
Sbjct: 336 FFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMY 395
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
++G I A + ++P D + W+ L+ ++G LA A +E G ++
Sbjct: 396 AKLGSIDCARAVFEQLPSR-DVISWNTLITGYAQNG---LASEAIDAYNMMEEGRTI 448
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 171/355 (48%), Gaps = 35/355 (9%)
Query: 113 VLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVI 169
V SC ++ K +HAL L V + L+ +Y+ + D + F++++ +N+
Sbjct: 57 VFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYA-TLGDLSLSSTTFKHIQRKNIF 115
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SWNSM++A+ +++ ++ L G+ PD+ TF VLKAC L
Sbjct: 116 SWNSMVSAYVRRGRYRDSMDCVTEL------------LSLSGVRPDFYTFPPVLKACLSL 163
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+H + K GFE D +A +LIH Y+R G++ ++ +VF M D+ SWN+++
Sbjct: 164 AD---GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMI 220
Query: 290 KAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
+ +G EAL++ M V+ D+ T S+L C+ + V G + H + HG+
Sbjct: 221 SGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVV-GGVLVHLYVIKHGL 279
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE--TRLAELA 404
+ ++++ + GR+ +A+++ M + D V W+ ++ + ++ + T L
Sbjct: 280 ESDVFVSNALINMYSKFGRLQDAQRVFDGMEVR-DLVSWNSIIAAYEQNDDPVTALGFFK 338
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
+ P D L V +++I+ G + R I + + G VR W+E++
Sbjct: 339 EMLFVGMRP-DLLTVVSLASIF---GQLSDRR-IGRAVHGFVVR----CRWLEVD 384
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 327/562 (58%), Gaps = 32/562 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
V N LI Y+K G+L +AR +F + + R+ VSW +++ Y QH + L+ + ++
Sbjct: 175 VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVR 234
Query: 102 YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK--SCADE 155
+ F+LASVL + D L G HA +K + +V + LI++YSK C +
Sbjct: 235 GLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD 294
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
KVF+ + +++ WN+MI+ + L+ + +EAL FRQLQ G PD
Sbjct: 295 CRKVFDEISNPDLVLWNTMISGY----------SLYEDL--SDEALECFRQLQGVGHRPD 342
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQVF 274
C+ V+ AC+ + + VH L K + + + NALI Y++CG++ +K +F
Sbjct: 343 DCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLF 402
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M H+ VS+NS++ YA HG ++L LF M + P + TF+S+L+AC+H G V+
Sbjct: 403 DTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVE 462
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G F+ M + G+ P+ H++CM+DLLGR G++ EAE+LI +P +P WS LLG+
Sbjct: 463 DGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGA 522
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR HG LA AA +L QL+P ++ +V ++NIY +G A +RK M+ V+K P
Sbjct: 523 CRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKP 582
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET---SLALHD-IEE 507
G SWIE+ R+H F + HP + I + LEE++ ++K +GY PE S+ D + +
Sbjct: 583 GCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQ 642
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
+E +L HHSEKLA+ F +M+ RE I + KN+RICVDCHN +K S+++ +EI
Sbjct: 643 REEELRLGHHSEKLAVSFGLMST----REGEPILVFKNLRICVDCHNAIKYISEVVKREI 698
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
VRDS+RFH FKD CSC YW
Sbjct: 699 TVRDSHRFHCFKDGQCSCGGYW 720
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 200/373 (53%), Gaps = 38/373 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++F N LI+ YAK Y++ A LFDEMP+ + VS+ LI+ YA+ G+ + F+LF +
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 101 QYFFP-NEFSLASVLISCDYLHG--KLVHALALKFSLDAHVYVANALINMYSKSC-ADEA 156
+ F + F+L+ ++ +C G + +HAL++ LD++V V NALI YSK+ EA
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 157 WKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
++F + E R+ +SWNSM+ A+ + ++A+EL+ +M G+ D
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMT-------------VRGLIVD 239
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS-KQVF 274
T + VL A + H+ + K G+ ++ + + LI Y++CG L ++VF
Sbjct: 240 IFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVF 299
Query: 275 DKMTYHDLVSWNSILKAYALHGQ-AKEALQLFSNMNV---QPDSATFVSLLSACSHAGLV 330
D+++ DLV WN+++ Y+L+ + EAL+ F + +PD + V ++SACS+
Sbjct: 300 DEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSP 359
Query: 331 QEGNKVFHSMLENHGVVPQLDHYA-------CMVDLLGRVGRILEAEKLIREMPMEPDSV 383
+G +V HG+ +LD + ++ + + G + +A+ L MP E ++V
Sbjct: 360 SQGRQV-------HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTV 411
Query: 384 IWSVLLGSCRKHG 396
++ ++ +HG
Sbjct: 412 SYNSMIAGYAQHG 424
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 159/324 (49%), Gaps = 43/324 (13%)
Query: 96 FCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
F SLL F +F L + + D GK +HAL +K + Y++N + +YSK C
Sbjct: 4 FSSLLHSF--RQF-LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSK-CRRL 59
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK------------------ 195
A +VF++ NV S+N++I+A+ A +LF +M
Sbjct: 60 SAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRG 119
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACA---GLVTERHASAVHSLIAKYGFEDDTV 252
+ + A LF +++ + D T S ++ AC GL+ + HA +V + G +
Sbjct: 120 DTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVT-----GLDSYVS 174
Query: 253 IANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSILKAYALHGQAKEALQLFSNMNVQ 311
+ NALI +Y++ G + ++++F ++ D VSWNS++ AY H + +AL+L+ M V+
Sbjct: 175 VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVR 234
Query: 312 P---DSATFVSLLSACSHAGLVQE--GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR- 365
D T S+L+A ++ VQ+ G FH+ L G + ++DL + G
Sbjct: 235 GLIVDIFTLASVLTAFTN---VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGC 291
Query: 366 ILEAEKLIREMPMEPDSVIWSVLL 389
+L+ K+ E+ PD V+W+ ++
Sbjct: 292 MLDCRKVFDEIS-NPDLVLWNTMI 314
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 33/212 (15%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+F LK C R ++H+L K T ++N + Y++C +S +++VFD
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
++ S+N+++ AYA + A QLF M QPDS ++ +L++A + G Q ++F
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMP-QPDSVSYNTLIAAYARRGDTQPAFQLF 128
Query: 338 HSMLE-------------------NHGVVPQ---------LDHYACMVDLL----GRVGR 365
M E N G++ Q LD Y + + L + G
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ EA ++ + + D V W+ ++ + +H E
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHRE 220
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 341/590 (57%), Gaps = 29/590 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ C+ G + LH + I + ++L + N L++MY+K G L+ A +F+ M
Sbjct: 255 VSVVAGCSNTGMLLLGRALHGYAIK--ASFGKELTLNNCLLDMYSKSGNLNSAIQVFETM 312
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGK 123
+R+VVSWT++I+GYA+ G ++ RLF + + P+ F++ ++L +C +GK
Sbjct: 313 GERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGK 372
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
VH + + + ++V+NAL++MY+K +A VF M+ ++++SWN+MI +
Sbjct: 373 DVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNS 432
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
L +A+ LF +M+ + P+ T + +L ACA L +H I
Sbjct: 433 LPNEALNLFVEMQYNSK--------------PNSITMACILPACASLAALERGQEIHGHI 478
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ GF D +ANAL+ Y +CG++ L++ +FD + DLVSW ++ Y +HG EA+
Sbjct: 479 LRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAI 538
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
F+ M ++PD +F+S+L ACSH+GL+ EG F+ M N + P+ +HYAC+VDL
Sbjct: 539 AAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDL 598
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
L R G + +A K I+ MP+EPD+ IW LL CR + + +LAE A + +LEP ++ +
Sbjct: 599 LARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYY 658
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V ++NIY + + + + +R+ + +RK PG SWIEI+ +VH F +G HP I
Sbjct: 659 VLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIE 718
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
L++ ++K G+ P+ AL ++ KE L HSEK+A+ F I+ SL ++V
Sbjct: 719 LLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGIL---SLPPGKTV 775
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ KN+R+C DCH K S ++ ++I++RDSNRFHHFKD CSC +W
Sbjct: 776 -RVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 221/433 (51%), Gaps = 52/433 (12%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFG------------------YLDD 60
G++++ ++ + + N + +F+ N L+N YAK G ++
Sbjct: 150 GDLREGRRIFDKVAN------EKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF-SLASVLISCD- 118
AR LFDE+ R+V+SW ++ISGY +G +E+ LF +L + ++ SV+ C
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 119 ---YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSM 174
L G+ +H A+K S + + N L++MYSKS + A +VFE M R+V+SW SM
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 323
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
IA + L ++ LF +M ++EG++PD T + +L ACA +
Sbjct: 324 IAGYAREGLSDMSVRLFHEM-------------EKEGISPDIFTITTILHACACTGLLEN 370
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
VH+ I + + D ++NAL+ YA+CGS+ + VF +M D+VSWN+++ Y+
Sbjct: 371 GKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSK 430
Query: 295 HGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
+ EAL LF M N +P+S T +L AC+ ++ G ++ +L N + + H
Sbjct: 431 NSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDR--H 488
Query: 353 YA-CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ- 410
A +VD+ + G L +L+ +M E D V W+V++ HG A A +++
Sbjct: 489 VANALVDMYLKCG-ALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNS 547
Query: 411 -LEPGDSLGFVQM 422
+EP D + F+ +
Sbjct: 548 GIEP-DEVSFISI 559
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 112/275 (40%), Gaps = 58/275 (21%)
Query: 181 CKLEAQAIEL--FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
CK+ IE+ F ++ N A+ L Q + + + T+ VL+ CA L + + +
Sbjct: 66 CKITDYNIEICRFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKSIQDGRRI 123
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY------------------- 279
HS+I E D V+ + L+ Y CG + +++FDK+
Sbjct: 124 HSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNF 183
Query: 280 ------------------------------HDLVSWNSILKAYALHGQAKEALQLFSNM- 308
D++SWNS++ Y +G +++ L LF M
Sbjct: 184 RESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQML 243
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ D AT VS+++ CS+ G++ G + H +L C++D+ + G +
Sbjct: 244 LLGINTDLATMVSVVAGCSNTGMLLLG-RALHGYAIKASFGKELTLNNCLLDMYSKSGNL 302
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
A ++ M E V W+ ++ + G + ++
Sbjct: 303 NSAIQVFETMG-ERSVVSWTSMIAGYAREGLSDMS 336
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 329/579 (56%), Gaps = 34/579 (5%)
Query: 26 QLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
QLH I + FP++P F + L++MY DAR FDE+P N V TA+ SGY
Sbjct: 110 QLHLLAIRSGLFPSDP---FSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGY 166
Query: 84 AQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS-------CDYLHGKLVHALALKFSLDA 136
++ LF L+ A+ L++ D +HAL +K LD
Sbjct: 167 VRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDG 226
Query: 137 HVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V N +++ Y+K + A KVF+ ME ++V+SWNSMIA + + A A+ L+ K
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRK 285
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
M N ++ + T S +L ACA T + +H+ + + G E++ +
Sbjct: 286 MLNVSGSIKC-----------NAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYV 334
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
+++ Y++CG + ++++ F K+ +++SW++++ Y +HG +EAL +F+ M
Sbjct: 335 GTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQ 394
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
P+ TF+S+L+ACSHAGL+ +G +++M + G+ P ++HY CMVDLLGR G + EA
Sbjct: 395 NPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAY 454
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
LI+EM ++PD+ IW LL +CR H LAE++A +L +L+ + +V +SNIY +G
Sbjct: 455 GLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAG 514
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
+ +R +K + K PG S +E++ R H F G K HPQ + I+ L +L+ +++
Sbjct: 515 MWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQ 574
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GYVP T LHD++EE K L+ HSEKLA+ FA+MN SVI ++KN+R+C
Sbjct: 575 EAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNS----VPGSVIHVIKNLRVCT 630
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +KL + + +EI+VRD RFHHFKD CSC DYW
Sbjct: 631 DCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/625 (36%), Positives = 345/625 (55%), Gaps = 55/625 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
FLH Q+ CA + A +LH +I ++ ++N L+++Y K G +
Sbjct: 6 FLHQLQL-------CARRQSASAAGELHSQIIKAGFDKSS--LLSNTLLDVYGKCGLIPQ 56
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF------PNEFSLASVL 114
A LFDEMP R+ VSW ++++ + N R S+L F P+ F A ++
Sbjct: 57 ALQLFDEMPNRDHVSWASILTAH----NKALIPRRTLSMLNTMFTHDGLQPDHFVFACIV 112
Query: 115 ISCDYLH----GKLVHA-LALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRN 167
+C L GK VHA L F D V V ++LI+MY+K C D+A VF+++ F+N
Sbjct: 113 RACSSLGYLRLGKQVHARFMLSFFCDDEV-VKSSLIDMYTK-CGQPDDARAVFDSILFKN 170
Query: 168 VISWNSMIAAFRACKLEAQAIELF--AKMKN--EEEALF--------------LFRQLQR 209
+SW SMI+ + + +A++LF A ++N AL LF +++R
Sbjct: 171 SVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRR 230
Query: 210 EGM-APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
EG+ D S V+ CA L +H L+ GFE I+NAL+ YA+C I
Sbjct: 231 EGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDIL 290
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
+K +F +M D++SW SI+ A HG+A+EAL L+ M ++P+ TFV LL ACS
Sbjct: 291 AAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACS 350
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
HAGLV G ++F SM ++ + P L HY C++DLL R G + EAE L+ ++P +PD W
Sbjct: 351 HAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTW 410
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
+ LL +C +H + A ++ L+P D ++ +SN+Y + + +RK M
Sbjct: 411 ASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSM 470
Query: 446 RVRKYPGLSWIEIENRVHEFASGGK-RHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
VRK PG S I+ F +G HP + I L++L +++ GYVP TS L+D
Sbjct: 471 EVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYD 530
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
IE++ KE+QL+ HSE+LA+ + ++ ++IRI+KN+RIC DCHN +K SD++
Sbjct: 531 IEQQEKEKQLFWHSERLAVAYGLLK----AVPGTIIRIVKNLRICGDCHNVLKFISDIVK 586
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD+ R+HHFK+ CSCND+W
Sbjct: 587 REIMVRDATRYHHFKEGKCSCNDFW 611
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/537 (37%), Positives = 312/537 (58%), Gaps = 21/537 (3%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC 117
L AR++F +P + +++ +I +++ + F F + F+ VL +C
Sbjct: 38 LSYARYVFSRIPSPDTIAYNTIIRSHSRFFPSHSLFYFFSMRSNGIPLDNFTFPFVLKAC 97
Query: 118 DYLHGKL-VHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMI 175
L L +H+L +K+ LD+ ++V NALI +Y + E A KVF+ M R+ +SW+++I
Sbjct: 98 SRLQINLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVI 157
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A+F ++A++LF KM+ E++ + PD T V+ A + L
Sbjct: 158 ASFLNNGYASEALDLFEKMQLEDKVV------------PDEVTMLSVISAISHLGDLELG 205
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
V + I + G + ALI ++RCGSI S VF+KM ++++W +++ +H
Sbjct: 206 RWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVH 265
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G++ EAL +F +M VQPD TF +L ACSH GLV+EG +F S+ + + + P LDH
Sbjct: 266 GRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDH 325
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y CMVD+LGR G + EA + MPM+P+S+IW LLG+C H LAE K+ ++
Sbjct: 326 YGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKIS 385
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
+ V +SN+Y +G + + IR +M+ R+ K PG S I ++ +HEF SG H
Sbjct: 386 SSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSH 445
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
PQ E I K L +IG L+ GY+ +T LHDIEEE +E L +HSEKLA+ FAI++
Sbjct: 446 PQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSM-- 503
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+++ IRIMKN+RIC DCH+FMK S ++I++RD NRFHHF+ +CSC+DYW
Sbjct: 504 --KDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 109/217 (50%), Gaps = 22/217 (10%)
Query: 25 MQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYA 84
+ LH H + D+FV N LI +Y G L+ A +FDEM +R+ VSW+ +I+ +
Sbjct: 102 INLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFL 161
Query: 85 QHGNAEECFRLF--CSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHV 138
+G A E LF L P+E ++ SV+ + +L G+ V A + L V
Sbjct: 162 NNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSV 221
Query: 139 YVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
+ ALI+M+S+ DE+ VFE M RNV++W ++I
Sbjct: 222 ALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALING-------------LGVHGRS 268
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE 232
EAL +F +++ G+ PD+ TFS VL AC+ GLV E
Sbjct: 269 TEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKE 305
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PN 106
LI+M+++ G +D++ +F++M RNV++WTALI+G HG + E +F S+ + P+
Sbjct: 227 LIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPD 286
Query: 107 EFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYS--------KSCADEAWK 158
+ + VL++C HG LV F VY + L++ Y +EA+
Sbjct: 287 YVTFSGVLVACS--HGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYD 344
Query: 159 VFENMEFR-NVISWNSMIAA 177
E M + N I W +++ A
Sbjct: 345 FVERMPMKPNSIIWRTLLGA 364
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/585 (37%), Positives = 340/585 (58%), Gaps = 38/585 (6%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
I Q + +H +I N QD F+ L+ +K +D A +F NV +TALI
Sbjct: 45 INQVLPIHAQLIRN--GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 102
Query: 81 SGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLD 135
G+ GN + +L+ +L P+ + +AS+L +C G+ VH+ ALK L
Sbjct: 103 DGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLS 162
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENME----FRNVISWNSMIAAFRACKLEAQAIE 189
++ V ++ +Y K C + +A +VFE M ++ + W +MI F
Sbjct: 163 SNRLVRLRIMELYGK-CGELGDARRVFEEMPEDVVAKDTVCWTAMIDGF----------- 210
Query: 190 LFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
++NEE AL FR +Q E + P+ T VL AC+ L VHS + K+
Sbjct: 211 ----VRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 266
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E + + NALI+ Y+RCGSI ++ VFD+M D++++N+++ +++G++++A++LF
Sbjct: 267 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 326
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M ++P + TFV +L+ACSH GLV G K+FHSM ++GV PQ++HY CMVDLLGRVG
Sbjct: 327 MIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVG 386
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
R+ EA LIR M M PD ++ LL +C+ H L E A L+ DS +V +S+
Sbjct: 387 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSH 446
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
+Y SG + +A +R +MK + ++K PG S IE+ N +HEF G RHP++E I++KLEE
Sbjct: 447 VYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEE 506
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
L L+ GY PE + L DIE+ KE L HSE+LA+ + +++ +VIR+MK
Sbjct: 507 LNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPC----TVIRVMK 562
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N+R+C DCH+ +KL + + +++VVRD NRFH+F++ CSC DYW
Sbjct: 563 NLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 607
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 18/279 (6%)
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+ Q I L + K+ + L + QL R G + D +L++C ++ HA S I
Sbjct: 32 QKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSC----SKCHAIDYASRIF 87
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN----SILKAYALHGQAK 299
+Y + + ALI + G+ + Q++ +M + ++ N SILKA +
Sbjct: 88 QYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALR 147
Query: 300 EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
E ++ S + + + + ++ G + + +VF M E+ V + M
Sbjct: 148 EGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDV-VAKDTVCWTAM 206
Query: 357 VDLLGR---VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+D R + R LEA + ++ + P+ +L +C + G + + +++ E
Sbjct: 207 IDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 266
Query: 414 GDSLGFV--QMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+L FV + N+Y GS ++A+ + EMK V Y
Sbjct: 267 ELNL-FVGNALINMYSRCGSIDEAQTVFDEMKDRDVITY 304
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/561 (38%), Positives = 314/561 (55%), Gaps = 30/561 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV +MY K DDAR LFDE+P+RN+ +W A IS G +E F
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFR 201
Query: 101 QYFF-PNEFSLASVLISC-DYLH---GKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
+ PN + L +C D L G +H L + D V V N LI+ Y K
Sbjct: 202 RIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261
Query: 156 AWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ ++ F M +N +SW S++AA+ + +E+A L+ + ++E +
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAY-------------VQNHEDEKASVLYLRSRKEIVET 308
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
S VL ACAG+ ++H+ K E + + +AL+ Y +CG I S+Q F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ-----PDSATFVSLLSACSHAGL 329
D+M +LV+ NS++ YA GQ AL LF +M + P+ TFVSLLSACS AG
Sbjct: 369 DEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGA 428
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+ G K+F SM +G+ P +HY+C+VD+LGR G + +A + I++MP++P +W L
Sbjct: 429 VENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQ 488
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+CR HG+ L LAA L +L+P DS V +SN + +G + +A +R+EMKG ++K
Sbjct: 489 NACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKK 548
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWI ++N+VH F + + H + I L +L +++ GY P+ L+L+D+EEE
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEE 608
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K ++ HHSEKLAL F G + SV IRI KN+RIC DCH+F K S + +EI+
Sbjct: 609 KAAEVSHHSEKLALAF-----GLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREII 663
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+NRFH FKD ICSC DYW
Sbjct: 664 VRDNNRFHRFKDGICSCKDYW 684
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 188/384 (48%), Gaps = 25/384 (6%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H ++ + P F+ N+LINMY+K + + AR + P RNVVSWT+L+SG AQ+
Sbjct: 28 VHARIVKTL-DSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQN 86
Query: 87 GN-AEECFRLFCSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVA 141
G+ + F F + PN+F+ V + L GK +HALA+K V+V
Sbjct: 87 GHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVG 146
Query: 142 NALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
+ +MY K+ D+A K+F+ + RN+ +WN+ I+ +AIE F
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFI-------- 198
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
+ +R G P+ TF L AC+ + +H L+ + GF+ D + N LI
Sbjct: 199 -----EFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDF 253
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATF 317
Y +C I S+ +F +M + VSW S++ AY + + ++A L+ V+
Sbjct: 254 YGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMI 313
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
S+LSAC+ ++ G + H+ V + + +VD+ G+ G I ++E+ EMP
Sbjct: 314 SSVLSACAGMAGLELGRSI-HAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 378 MEPDSVIWSVLLGSCRKHGETRLA 401
E + V + L+G G+ +A
Sbjct: 373 -EKNLVTLNSLIGGYAHQGQVDMA 395
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 139/276 (50%), Gaps = 22/276 (7%)
Query: 122 GKLVHALALKFSLDAHV--YVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAF 178
G++VHA +K +LD+ ++AN LINMYSK E+ + V RNV+SW S+++
Sbjct: 25 GRVVHARIVK-TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGL 83
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ + ALF F +++REG+AP+ TF V KA A L +
Sbjct: 84 -------------AQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQI 130
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+L K G D + + Y + ++++FD++ +L +WN+ + G+
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRP 190
Query: 299 KEALQL---FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
KEA++ F + QP+S TF L+ACS L+ G ++ H ++ G + Y
Sbjct: 191 KEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQM-HGLVFRSGFDTDVSVYNG 249
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
++D G+ +I +E + EM M+ ++V W L+ +
Sbjct: 250 LIDFYGKCKQIRSSEIIFAEMGMK-NAVSWCSLVAA 284
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +++ ACA ++ +H H + +++FV + L++MY K G ++D+ FD
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVE--RNIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF---FPNEFSLASVLISCDYLHG- 122
EMP++N+V+ +LI GYA G + LF + PN + S+L +C
Sbjct: 370 EMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAV 429
Query: 123 ----KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVIS-WNSMIA 176
K+ ++ + ++ + +++M ++ ++A++ + M + IS W ++
Sbjct: 430 ENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQN 489
Query: 177 AFR 179
A R
Sbjct: 490 ACR 492
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/608 (35%), Positives = 339/608 (55%), Gaps = 39/608 (6%)
Query: 15 CALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE-MPKRNV 73
CA +++Q ++ +I + + I + + G L + +F+ + N+
Sbjct: 31 CATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNI 90
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFFPN-----EFSLASVLISC----DYLHGKL 124
++ AL+ ++QH F + Q PN E++ SVL +C L G+
Sbjct: 91 FAYNALLKAFSQHNAWHTTISYFNN--QLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
VH K+ +++++V N+L+++Y K C A K+F+ M R+V+SWN++I+ + +
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208
Query: 184 EAQAIELFAKM----------------KNEE--EALFLFRQLQREG-MAPDWCTFSIVLK 224
+A +F M +NE+ +A+ LFRQ+Q EG +AP+ T VL
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLS 268
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA L +H I + E + NAL YA+CG + +K VF +M D++S
Sbjct: 269 ACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVIS 328
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W+ I+ A++G A EA F+ M ++P+ +F+ LL+AC+HAGLV +G + F M
Sbjct: 329 WSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMP 388
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ +G+ P+++HY C+VDLL R GR+ +AE LI MPM+P+ ++W LLG CR + +
Sbjct: 389 QVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERG 448
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
E ++ +L+ S V ++N+Y G + A R M+ ++ K PG SWIEI N
Sbjct: 449 ERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNS 508
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
V+EF G HPQ I+ + EL ++K GY P+T L +H+I+EE KE+ L HSEKL
Sbjct: 509 VYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKL 568
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
AL F ++N E + IRI+KN+R+C DCH+ +K+ S ++ +EIVVRD +RFHHFKD
Sbjct: 569 ALAFGLINTS----EGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDG 624
Query: 582 ICSCNDYW 589
CSCNDYW
Sbjct: 625 KCSCNDYW 632
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 332/596 (55%), Gaps = 29/596 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+ AC+ + ++H ++I + + FV + L++MYA + AR +FD
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKD-DELAANSFVASALVDMYATHEQVGKARQVFDM 332
Query: 68 MPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC---DYL 120
+P + + W A+I GYAQ G EE RLF + F P E ++ASVL +C +
Sbjct: 333 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 392
Query: 121 HGK-LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH +K + + +V NAL++MY++ D A ++F ++ +V+SWN++I
Sbjct: 393 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG- 451
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C ++ + F ++ E +QL+ G+ P+ T +L CA L +
Sbjct: 452 --CVVQGHVADAF-QLARE------MQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 502
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H ++ + D + +AL+ YA+CG ++LS+ VFD++ + ++WN ++ AY +HG
Sbjct: 503 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 562
Query: 299 KEALQLFSNMNV----QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EA LF M +P+ TF++ L+ACSH+G+V G ++FH+M +HGV P D A
Sbjct: 563 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 622
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C+VD+LGR GR+ EA ++ M V WS +LG+CR H L E+A +L +LEP
Sbjct: 623 CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 682
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
++ +V + NIY +G + +A +R M+ V K PG SWIE++ +H F +G HP
Sbjct: 683 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 742
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
E + +E L G++ GY P+TS LHD+++ K L HSEKLA+ F ++
Sbjct: 743 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAA-- 800
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+R+C DCH K S ++G+EIV+RD RFHHF++ CSC DYW
Sbjct: 801 --PGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 31/401 (7%)
Query: 13 HACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF-DEMPKR 71
H A ++ + H + N F N L++MYA+ G + DA+ LF P R
Sbjct: 174 HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGR 233
Query: 72 -NVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLV 125
+VV+W ++S Q G +E + ++ P+ + AS L +C L G+ +
Sbjct: 234 GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 293
Query: 126 HALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRAC 181
HA +K L A+ +VA+AL++MY+ +A +VF+ + + + WN+MI +
Sbjct: 294 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 353
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ +A+ LFA+M+ E G P T + VL ACA AVH
Sbjct: 354 GMDEEALRLFARMEAE------------AGFVPCETTMASVLPACARSEAFAGKEAVHGY 401
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G + + NAL+ YAR G +++++F + D+VSWN+++ + G +A
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461
Query: 302 LQLFSNM------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
QL M V P++ T ++LL C+ G ++ H H + + +
Sbjct: 462 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI-HGYAVRHALDTDVAVGSA 520
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+VD+ + G + + + +P +++ W+VL+ + HG
Sbjct: 521 LVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMHG 560
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 40/245 (16%)
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEE----------EALFLFRQ---------LQREGM 212
N+++ A+ C A A+E+F + + AL LFR+ G
Sbjct: 98 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157
Query: 213 APDWCTFSIV--------LKACAGLVTERHASAVHSLIAKYGF--EDDTVIANALIHAYA 262
P +F++V L A A V R H+ K G NAL+ YA
Sbjct: 158 HP-LTSFTLVSVLRAVSHLPAAAAAV--RLGREAHAFALKNGLLHGHQRFAFNALLSMYA 214
Query: 263 RCGSISLSKQVFDKMT--YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
R G ++ ++++F T D+V+WN+++ G EA+Q +M V+PD TF
Sbjct: 215 RLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTF 274
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
S L ACS L+ G ++ ++++ + + +VD+ ++ +A ++
Sbjct: 275 ASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF---D 331
Query: 378 MEPDS 382
M PDS
Sbjct: 332 MVPDS 336
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/576 (37%), Positives = 317/576 (55%), Gaps = 69/576 (11%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH---GNAEECF-RLF 96
D ++ + LI++YA L A+ LF+ R+VVSW A+I GY +H G+A F R+
Sbjct: 229 DSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMV 288
Query: 97 CSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYS-KSCADE 155
C V N +IN Y+ DE
Sbjct: 289 CR--------------------------------------DVISWNTMINGYAIVGKIDE 310
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK------------------NE 197
A ++F+ M RN++SWNSM+A F C A LF++M
Sbjct: 311 AKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKP 370
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
EAL LF Q++ G+ P T +L ACA L +H+ I E ++++ AL
Sbjct: 371 NEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTAL 430
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
+ YA+CG ISL+ QVF+ M D+++WN+I+ A+HG KEA QLF M V+P+
Sbjct: 431 VDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPND 490
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
TFV++LSACSHAG+V EG K+ M ++G+ P+++HY C++DLL R G + EA +LI
Sbjct: 491 ITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIG 550
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
MPMEP+ LLG CR HG L E+ +L L+P S ++ +SNIY + ++
Sbjct: 551 TMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDD 610
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK-GMG 493
AR +R MK + + K PG+S IE++ VH F +G HP+ I++KL E+ +LK +G
Sbjct: 611 ARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIG 670
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
Y +T L D+EEE KE L HSEKLA+ + +++ S + IRI+KN+R+C DCH
Sbjct: 671 YSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDS----KEAIRIVKNLRVCRDCH 726
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +KL S + G+EI+VRD NRFHHF+D CSC D+W
Sbjct: 727 HVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 10/213 (4%)
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I + K EAL L+ + + G+ PD T+ V+KAC VH+ + K GF
Sbjct: 167 IRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGF 226
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E D+ I ++LIH YA + +KQ+F+ + D+VSWN+++ Y H + A +F
Sbjct: 227 ECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDR 286
Query: 308 MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
M V D ++ ++++ + G + E ++F M E + L + M+ + G +
Sbjct: 287 M-VCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERN-----LVSWNSMLAGFVKCGNVE 340
Query: 368 EAEKLIREMPMEPDSVIWSVLL---GSCRKHGE 397
+A L EMP D V W+ +L C K E
Sbjct: 341 DAFGLFSEMPCR-DVVSWNSMLACYAQCGKPNE 372
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L ACA G + + + LH ++ +N + V L++MYAK G + A +F+ M
Sbjct: 394 SLLSACAHLGALDKGLHLHTYINDN--RIEVNSIVGTALVDMYAKCGKISLATQVFNAME 451
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
++V++W +I+G A HGN +E +LF + + PN+ + ++L +C +
Sbjct: 452 SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSH 502
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 332/596 (55%), Gaps = 29/596 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+ AC+ + ++H ++I + + FV + L++MYA + AR +FD
Sbjct: 276 FASALPACSRLELLDVGREMHAYVIKD-DELAANSFVASALVDMYATHEQVGKARQVFDM 334
Query: 68 MPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC---DYL 120
+P + + W A+I GYAQ G EE RLF + F P E ++ASVL +C +
Sbjct: 335 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 394
Query: 121 HGK-LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH +K + + +V NAL++MY++ D A ++F ++ +V+SWN++I
Sbjct: 395 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG- 453
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C ++ + F ++ E +QL+ G+ P+ T +L CA L +
Sbjct: 454 --CVVQGHVADAF-QLARE------MQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 504
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H ++ + D + +AL+ YA+CG ++LS+ VFD++ + ++WN ++ AY +HG
Sbjct: 505 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 564
Query: 299 KEALQLFSNMNV----QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EA LF M +P+ TF++ L+ACSH+G+V G ++FH+M +HGV P D A
Sbjct: 565 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 624
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C+VD+LGR GR+ EA ++ M V WS +LG+CR H L E+A +L +LEP
Sbjct: 625 CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 684
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
++ +V + NIY +G + +A +R M+ V K PG SWIE++ +H F +G HP
Sbjct: 685 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 744
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
E + +E L G++ GY P+TS LHD+++ K L HSEKLA+ F ++
Sbjct: 745 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAA-- 802
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+R+C DCH K S ++G+EIV+RD RFHHF++ CSC DYW
Sbjct: 803 --PGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 31/401 (7%)
Query: 13 HACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF-DEMPKR 71
H A ++ + H + N F N L++MYA+ G + DA+ LF P R
Sbjct: 176 HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGR 235
Query: 72 -NVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLV 125
+VV+W ++S Q G +E + ++ P+ + AS L +C L G+ +
Sbjct: 236 GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 295
Query: 126 HALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRAC 181
HA +K L A+ +VA+AL++MY+ +A +VF+ + + + WN+MI +
Sbjct: 296 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 355
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ +A+ LFA+M+ E G P T + VL ACA AVH
Sbjct: 356 GMDEEALRLFARMEAE------------AGFVPCETTMASVLPACARSEAFAGKEAVHGY 403
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G + + NAL+ YAR G +++++F + D+VSWN+++ + G +A
Sbjct: 404 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 463
Query: 302 LQLFSNM------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
QL M V P++ T ++LL C+ G ++ H H + + +
Sbjct: 464 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI-HGYAVRHALDTDVAVGSA 522
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+VD+ + G + + + +P +++ W+VL+ + HG
Sbjct: 523 LVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMHG 562
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 40/245 (16%)
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEE----------EALFLFRQ---------LQREGM 212
N+++ A+ C A A+E+F + + AL LFR+ G
Sbjct: 100 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 159
Query: 213 APDWCTFSIV--------LKACAGLVTERHASAVHSLIAKYGF--EDDTVIANALIHAYA 262
P +F++V L A A V R H+ K G NAL+ YA
Sbjct: 160 HP-LTSFTLVSVLRAVSHLPAAAAAV--RLGREAHAFALKNGLLHGHQRFAFNALLSMYA 216
Query: 263 RCGSISLSKQVFDKMT--YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
R G ++ ++++F T D+V+WN+++ G EA+Q +M V+PD TF
Sbjct: 217 RLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTF 276
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
S L ACS L+ G ++ ++++ + + +VD+ ++ +A ++
Sbjct: 277 ASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF---D 333
Query: 378 MEPDS 382
M PDS
Sbjct: 334 MVPDS 338
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 326/564 (57%), Gaps = 29/564 (5%)
Query: 39 PQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
P D + + L++MY DAR FDE+P N V TA+ SGY ++ LF +
Sbjct: 126 PSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRA 185
Query: 99 LLQYFFPNEFSLASVLIS-------CDYLHGKLVHALALKFSLDAHVYVANALINMYSKS 151
++ + A+ L++ D +HAL K + + V N +++ Y+K
Sbjct: 186 MIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKG 245
Query: 152 CADE---AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
+ + A KVF+ ME R+V+SWNSMIA + + A+AI L++KM N
Sbjct: 246 GSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLN-----------V 293
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G+ + S VL ACA + +H+ + + G E++ + +++ Y++CG +
Sbjct: 294 GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 353
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
++ + F K+ +++SW++++ Y +HG+ +EAL++F+ M ++P+ TF+S+L+ACS
Sbjct: 354 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS 413
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
HAGL+ EG +++M + G+ ++HY CMVDLLGR G + EA LI+EM ++PD+ IW
Sbjct: 414 HAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIW 473
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LL +CR H LAE++ +L +L+ +S +V +SNIY + + IR +K
Sbjct: 474 GALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTR 533
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
R+ K PG S E++ +++ F G K HPQ I+ LE+L+ +++ GYVP T LHD+
Sbjct: 534 RIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDL 593
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+EE KE L HSEKLA+ FA+MN RSVI I+KN+R+C DCH MK + + +
Sbjct: 594 DEEEKESALRIHSEKLAVAFALMNS----VPRSVIHIIKNLRVCSDCHTAMKFITKITER 649
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI++RD RFHHFKD +CSC DYW
Sbjct: 650 EIIIRDLQRFHHFKDGLCSCRDYW 673
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 332/596 (55%), Gaps = 29/596 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+ AC+ + ++H ++I + + FV + L++MYA + AR +FD
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKD-DELAANSFVASALVDMYATHEQVGKARQVFDM 332
Query: 68 MPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC---DYL 120
+P + + W A+I GYAQ G EE RLF + F P E ++ASVL +C +
Sbjct: 333 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 392
Query: 121 HGK-LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH +K + + +V NAL++MY++ D A ++F ++ +V+SWN++I
Sbjct: 393 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG- 451
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C ++ + F ++ E +QL+ G+ P+ T +L CA L +
Sbjct: 452 --CVVQGHVADAF-QLARE------MQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 502
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H ++ + D + +AL+ YA+CG ++LS+ VFD++ + ++WN ++ AY +HG
Sbjct: 503 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 562
Query: 299 KEALQLFSNMNV----QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EA LF M +P+ TF++ L+ACSH+G+V G ++FH+M +HGV P D A
Sbjct: 563 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 622
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C+VD+LGR GR+ EA ++ M V WS +LG+CR H L E+A +L +LEP
Sbjct: 623 CVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 682
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
++ +V + NIY +G + +A +R M+ V K PG SWIE++ +H F +G HP
Sbjct: 683 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 742
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
E + +E L G++ GY P+TS LHD+++ K L HSEKLA+ F ++
Sbjct: 743 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAA-- 800
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+R+C DCH K S ++G+EIV+RD RFHHF++ CSC DYW
Sbjct: 801 --PGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 31/401 (7%)
Query: 13 HACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF-DEMPKR 71
H A ++ + H + N F N L++MYA+ G + DA+ LF P R
Sbjct: 174 HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGR 233
Query: 72 -NVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLV 125
+VV+W ++S Q G +E + ++ P+ + AS L +C L G+ +
Sbjct: 234 GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 293
Query: 126 HALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRAC 181
HA +K L A+ +VA+AL++MY+ +A +VF+ + + + WN+MI +
Sbjct: 294 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 353
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ +A+ LFA+M+ E G P T + VL ACA AVH
Sbjct: 354 GMDEEALRLFARMEAE------------AGFVPCETTMASVLPACARSEAFAGKEAVHGY 401
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G + + NAL+ YAR G +++++F + D+VSWN+++ + G +A
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461
Query: 302 LQLFSNM------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
QL M V P++ T ++LL C+ G ++ H H + + +
Sbjct: 462 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI-HGYAVRHALDTDVAVGSA 520
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+VD+ + G + + + +P +++ W+VL+ + HG
Sbjct: 521 LVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMHG 560
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 40/245 (16%)
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEE----------EALFLFRQ---------LQREGM 212
N+++ A+ C A A+E+F + + AL LFR+ G
Sbjct: 98 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157
Query: 213 APDWCTFSIV--------LKACAGLVTERHASAVHSLIAKYGF--EDDTVIANALIHAYA 262
P +F++V L A A V R H+ K G NAL+ YA
Sbjct: 158 HP-LTSFTLVSVLRAVSHLPAAAAAV--RLGREAHAFALKNGLLHGHQRFAFNALLSMYA 214
Query: 263 RCGSISLSKQVFDKMT--YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
R G ++ ++++F T D+V+WN+++ G EA+Q +M V+PD TF
Sbjct: 215 RLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTF 274
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
S L ACS L+ G ++ ++++ + + +VD+ ++ +A ++
Sbjct: 275 ASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF---D 331
Query: 378 MEPDS 382
M PDS
Sbjct: 332 MVPDS 336
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 348/597 (58%), Gaps = 36/597 (6%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
I Q + +H +I N QD F+ L+ +K +D A +F NV +TALI
Sbjct: 62 INQVLPIHAQLIRN--GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 119
Query: 81 SGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLD 135
G+ GN + +L+ +L P+ + +AS+L +C G+ VH+ ALK L
Sbjct: 120 DGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLS 179
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
++ V ++ +Y K C + +A +VFE M +V++ MI+++ L +A +F++
Sbjct: 180 SNRLVRLRIMELYGK-CGELGDARRVFEEMP-EDVVASTVMISSYSDQGLVEEAGAVFSR 237
Query: 194 MK----------------NEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
++ NEE AL FR +Q E + P+ T VL AC+ L
Sbjct: 238 VRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 297
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VHS + K+ E + + NALI+ Y+RCGSI ++ VFD+M D++++N+++ +++
Sbjct: 298 RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMN 357
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G++++A++LF M ++P + TFV +L+ACSH GLV G K+FHSM ++GV PQ++H
Sbjct: 358 GKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEH 417
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y CMVDLLGRVGR+ EA LIR M M PD ++ LL +C+ H L E A L+
Sbjct: 418 YGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRG 477
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
DS +V +S++Y SG + +A +R +MK + ++K PG S IE+ N +HEF G RH
Sbjct: 478 QADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRH 537
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P++E I++KLEEL L+ GY PE + L DIE+ KE L HSE+LA+ + +++
Sbjct: 538 PRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEP 597
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+VIR+MKN+R+C DCH+ +KL + + +++VVRD NRFH+F++ CSC DYW
Sbjct: 598 C----TVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/603 (36%), Positives = 335/603 (55%), Gaps = 41/603 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A CA + +H+ ++ + PQD + + L+NMY K + +AR +F+
Sbjct: 114 FACALGGCASVAGLADGRAIHQRILAS--KVPQDDVLQDSLLNMYLKCDEMVEARKVFEG 171
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFC--SLLQYFFPNEFSLASVLISCDYL----H 121
M RNV S+TA+IS Y Q G E LF S ++ PN ++ A++L + + L
Sbjct: 172 MKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK 231
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRA 180
G+ VH D +V V NAL+ MY K + EA KVF++M RNVISW SMIAA+
Sbjct: 232 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAY-- 289
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ N +EAL LF+++ E P +FS L ACA L +H
Sbjct: 290 -----------AQHGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHH 335
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ + + +L+ YARCGS+ +++VF++M D S N+++ A+ HG+ K+
Sbjct: 336 RVVEAHLASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQ 394
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+++ M + D TFVS+L ACSH LV + F S++ +HGVVP ++HY CMV
Sbjct: 395 ALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMV 454
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR GR+ +AE+L+ MP + D+V W LL C++HG+ E AA K+ +L P ++L
Sbjct: 455 DVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETL 514
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR-- 475
+V +SN+Y + F+ AR +RKEM+ V +S+IEI+N +H F SGG+ Q
Sbjct: 515 PYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGH 574
Query: 476 -----EAIFKKLEELIGQLKGMGYVPETSLALHD----IEEEHKEEQLYHHSEKLALVFA 526
E + L EL+ +K GYVP+T + EE K+ L HSE+LA+ +
Sbjct: 575 DGRTMERVRSLLLELLEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYG 634
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
++ R +R++ + R+C DCH+ +KL SD++ K I VRD NRFHHF+ CSC
Sbjct: 635 LIAAKDPDDSRP-LRVVNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCG 693
Query: 587 DYW 589
D+W
Sbjct: 694 DHW 696
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 226/424 (53%), Gaps = 26/424 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I +L AC +++ +LHEH+I D+ + L+ MYAK G LDDA+ +F+
Sbjct: 12 IVTSLVAACTKLQALEEGRRLHEHLI--ITGFRTDIPLETALLQMYAKCGSLDDAKRVFE 69
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----H 121
M +++ +W+++IS YA+ G E L+ ++ + PN + A L C +
Sbjct: 70 GMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLAD 129
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H L + + ++L+NMY K C + EA KVFE M+ RNV S+ +MI+A+
Sbjct: 130 GRAIHQRILASKVPQDDVLQDSLLNMYLK-CDEMVEARKVFEGMKARNVRSYTAMISAYV 188
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+A+ELF++M + E + P+ TF+ +L A GL VH
Sbjct: 189 QAGEHAEALELFSRMS------------KVEAIEPNAYTFATILGAVEGLGNLEKGRKVH 236
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+A GF+ + V+ NAL+ Y +CGS +++VFD MT +++SW S++ AYA HG +
Sbjct: 237 RHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQ 296
Query: 300 EALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
EAL LF M+V+P +F S L+AC+ G + EG ++ H ++E H PQ++ ++ +
Sbjct: 297 EALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSM 354
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLG 418
R G + +A ++ M D+ + ++ + +HG + A +++Q P D +
Sbjct: 355 YARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGIT 413
Query: 419 FVQM 422
FV +
Sbjct: 414 FVSV 417
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 173/342 (50%), Gaps = 26/342 (7%)
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVF 160
++F + S++ +C L G+ +H + + + AL+ MY+K + D+A +VF
Sbjct: 9 DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E ME +++ +W+S+I+A+ A+ E A+ L+R++ EG+ P+ TF+
Sbjct: 69 EGMEIKDLFAWSSIISAY-------------ARAGRGEMAVVLYRRMIAEGVEPNVVTFA 115
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
L CA + A+H I D V+ ++L++ Y +C + +++VF+ M
Sbjct: 116 CALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKAR 175
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKV 336
++ S+ +++ AY G+ EAL+LFS M+ ++P++ TF ++L A G +++G KV
Sbjct: 176 NVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKV 235
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H L + G + +V + G+ G +EA K+ M + + W+ ++ + +HG
Sbjct: 236 -HRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR-NVISWTSMIAAYAQHG 293
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
+ A L K +EP + F N L G+ ++ R I
Sbjct: 294 NPQEA-LNLFKRMDVEP-SGVSFSSALNACALLGALDEGREI 333
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
++ G+ D + ++ AC L +H + GF D + AL+ YA+CGS
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ +K+VF+ M DL +W+SI+ AYA G+ + A+ L+ M V+P+ TF L
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLD 351
C+ + +G + +L + VPQ D
Sbjct: 121 CASVAGLADGRAIHQRILASK--VPQDD 146
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/593 (34%), Positives = 336/593 (56%), Gaps = 33/593 (5%)
Query: 9 ATLFHACA-LHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A++ AC+ L G A Q+H + D FV+ LI++Y+K G +++A LF
Sbjct: 1011 ASVLRACSSLGGGCHLATQIHACAMK--AGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVN 1068
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYL----H 121
++ SW A++ GY G+ + RL+ L+Q N+ +LA+ + L
Sbjct: 1069 QDGFDLASWNAMMHGYIVSGDFPKALRLYI-LMQESGERANQITLANAAKAAGGLVGLKQ 1127
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
GK + A+ +K + ++V + +++MY K C + A ++F + + ++W +MI+
Sbjct: 1128 GKQIQAVVVKRGFNLDLFVISGVLDMYLK-CGEMESARRIFNEIPSPDDVAWTTMISG-- 1184
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C Q EE ALF + ++ + PD TF+ ++KAC+ L +H
Sbjct: 1185 -CVENGQ----------EEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIH 1233
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K D + +L+ YA+CG+I ++ +F + + SWN+++ A HG A+
Sbjct: 1234 ANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAE 1293
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EALQ F M V PD TF+ +LSACSH+GLV E + F+SM + +G+ P+++HY+C+
Sbjct: 1294 EALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCL 1353
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VD L R GRI EAEK+I MP E + ++ LL +CR + + A KL LEP DS
Sbjct: 1354 VDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDS 1413
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SN+Y + + R M+ + V+K PG SW++++N+VH F +G + H + +
Sbjct: 1414 AAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETD 1473
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ K+E ++ +++ GY+P+T AL D+EEE KE LY+HSEKLA+ + +M
Sbjct: 1474 VIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMK----TPP 1529
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R++KN+R+C DCHN +K S + +E+V+RD+NRFHHF+ +CSC DYW
Sbjct: 1530 STTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 185/368 (50%), Gaps = 27/368 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q + V N LINMY K G + AR +F +M + ++VSW +ISG A G E +F L
Sbjct: 939 QVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDL 998
Query: 100 LQ-YFFPNEFSLASVLISCDYLHG-----KLVHALALKFSLDAHVYVANALINMYSKSCA 153
L+ P++F++ASVL +C L G +HA A+K + +V+ LI++YSKS
Sbjct: 999 LRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGK 1058
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+EA +F N + ++ SWN+M+ + +A+ L+ M Q G
Sbjct: 1059 MEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILM-------------QESGE 1105
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ T + KA GLV + + +++ K GF D + + ++ Y +CG + +++
Sbjct: 1106 RANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARR 1165
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
+F+++ D V+W +++ +GQ + AL + +M VQPD TF +L+ ACS
Sbjct: 1166 IFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTA 1225
Query: 330 VQEGNKVFHSMLE-NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+++G ++ + ++ N P + +VD+ + G I +A L + + W+ +
Sbjct: 1226 LEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTSRIAS-WNAM 1282
Query: 389 LGSCRKHG 396
+ +HG
Sbjct: 1283 IVGLAQHG 1290
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 186/411 (45%), Gaps = 61/411 (14%)
Query: 1 FLHS-TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLD 59
+HS Q ++ L HA A ++ + H ++ + D F+TN+LI MY+K G L
Sbjct: 622 LIHSIPQWFSILRHAIAA-SDLPLGKRAHARILTS--GHHPDRFLTNNLITMYSKCGSLS 678
Query: 60 DARHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASV--- 113
AR LFD P R++V+W A++S +A A + F LF L + F +LA V
Sbjct: 679 SARKLFDTTPDTSRDLVTWNAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKM 736
Query: 114 -LISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
L+S + +H A+K L V+VA AL+N+Y+K EA +F+ M R+V+ W
Sbjct: 737 CLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLW 796
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD---WCTFSIVLKACAG 228
N M+ A+ LE EAL LF + R G+ PD CT + V+K+
Sbjct: 797 NVMMKAYVDTGLEY-------------EALLLFSEFNRTGLRPDDVTLCTLARVVKSKQN 843
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
++ + + YG ++ GS D+++WN
Sbjct: 844 VLEWQLKQ-----LKAYG-------TKLFMYDDDDDGS--------------DVIAWNKT 877
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
L + G+ EA+ F +M V D TFV +LS + ++ G ++ H ++ G
Sbjct: 878 LSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQI-HGIVVRSG 936
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + C++++ + G + A + +M E D V W+ ++ C G
Sbjct: 937 LDQVVSVGNCLINMYVKTGSVSRARTVFWQM-NEVDLVSWNTMISGCALSG 986
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 171/379 (45%), Gaps = 42/379 (11%)
Query: 1 FLHSTQ-IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLD 59
F+ +T+ A +F C L + A LH + + D+FV L+N+YAKFG +
Sbjct: 722 FVSATRHTLAPVFKMCLLSASPSAAESLHGYAVK--IGLQWDVFVAGALVNIYAKFGRIR 779
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD 118
+AR LFD M R+VV W ++ Y G E LF + P++ +L ++
Sbjct: 780 EARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTL----- 834
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAF 178
A +K + + L K+ + + ++ + +VI+WN ++ F
Sbjct: 835 --------ARVVKSKQNVLEWQLKQL-----KAYGTKLFMYDDDDDGSDVIAWNKTLSWF 881
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+A++ F M N +A D TF ++L AGL +
Sbjct: 882 LQRGETWEAVDCFVDMINSR-------------VACDGLTFVVMLSVVAGLNCLELGKQI 928
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H ++ + G + + N LI+ Y + GS+S ++ VF +M DLVSWN+++ AL G
Sbjct: 929 HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLE 988
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY-- 353
+ ++ +F ++ + PD T S+L ACS G H+ GVV LD +
Sbjct: 989 ECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVV--LDSFVS 1046
Query: 354 ACMVDLLGRVGRILEAEKL 372
++D+ + G++ EAE L
Sbjct: 1047 TTLIDVYSKSGKMEEAEFL 1065
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ATL AC+L ++Q Q+H + + N D FV L++MYAK G ++DAR LF
Sbjct: 1213 FATLVKACSLLTALEQGRQIHANTVK--LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKR 1270
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLV- 125
+ SW A+I G AQHGNAEE + F + + P+ + VL +C H LV
Sbjct: 1271 TNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACS--HSGLVS 1328
Query: 126 ------HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF 178
+++ + ++ + + L++ S++ EA KV +M F S +
Sbjct: 1329 EAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTL--L 1386
Query: 179 RACKLE 184
AC+++
Sbjct: 1387 NACRVQ 1392
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 337/562 (59%), Gaps = 31/562 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH-GNAEECFRLFCSL 99
D+ V+N L+ +YA+ +++ + +F +MP+ + VSW + I A++ + + + F +
Sbjct: 591 DVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEM 650
Query: 100 LQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+Q + PN + ++L + G +HAL LK+S+ + NAL+ Y K
Sbjct: 651 MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQM 710
Query: 154 DEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
++ +F M E R+ +SWNSMI+ + + +A++L M +QR G
Sbjct: 711 EDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPM------------MQR-GQ 757
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D TF+ VL ACA + T VH+ + E D V+ +AL+ YA+CG I + +
Sbjct: 758 KLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASR 817
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
F+ M ++ SWNS++ YA HG ++AL++F+ M PD TFV +LSACSH GL
Sbjct: 818 FFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGL 877
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V EG K F SM E +G+ P+++H++CMVDLLGR G + + E I+ MPM+P+ +IW +L
Sbjct: 878 VDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVL 937
Query: 390 GSC-RKHGE-TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
G+C R +G T L + AA L +LEP +++ +V +SN++ G++ R M+ + V
Sbjct: 938 GACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAV 997
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K G SW+ +++ VH F +G + HP++E I++KL+EL+ +++ GYVPET AL+D+E
Sbjct: 998 KKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLEL 1057
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E+KEE L +HSEKLA+ F + + L IRIMKN+R+C DCH K S ++G++I
Sbjct: 1058 ENKEELLSYHSEKLAIAFVLTRKSEL-----PIRIMKNLRVCGDCHTAFKYISKIVGRQI 1112
Query: 568 VVRDSNRFHHFKDRICSCNDYW 589
++RDSNRFHHF +CSC DYW
Sbjct: 1113 ILRDSNRFHHFGGGMCSCGDYW 1134
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 190/369 (51%), Gaps = 33/369 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+F N LIN+Y + G L AR LFDEMP++N+VSW+ LISGY Q+ +E LF ++
Sbjct: 174 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVI 233
Query: 101 QY-FFPNEFSLASVLISCDYLH------GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
PN F++ S L +C G +HA K + + ++N L++MYS
Sbjct: 234 SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSG 293
Query: 154 --DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D+A +VF+ ++FRN ++WNS+I+ + A +LF+ M+ E L
Sbjct: 294 SIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVEL---------N 344
Query: 212 MAPDWCTF-SIVLKACA----GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+ P+ T S+V AC+ GLV + + I K GF D + +AL++ +AR G
Sbjct: 345 LRPNEYTLCSLVTAACSLADCGLVLLEQ---MLTRIEKSGFLRDLYVGSALVNGFARYGL 401
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN--VQPDSATFVSLLSAC 324
+ +K +F +M + V+ N ++ A Q +EA ++F M V+ +S + V LLS
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTF 461
Query: 325 SHAGLVQEGNKV---FHSMLENHGVV-PQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
+ ++EG + H+ L G+V ++ +V++ G+ I A + + MP
Sbjct: 462 TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP-SK 520
Query: 381 DSVIWSVLL 389
D+V W+ ++
Sbjct: 521 DTVSWNSMI 529
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 182/368 (49%), Gaps = 36/368 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+DL+V + L+N +A++G +D A+ +F +M RN V+ L+ G A+ EE ++F +
Sbjct: 384 RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 443
Query: 100 LQYFFPNEFSLASVLISCDYL--------HGKLVHALALKFSL-DAHVYVANALINMYSK 150
N SL +L + G+ VHA + L DA + + NAL+NMY K
Sbjct: 444 KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGK 503
Query: 151 SCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQL 207
A D A VF+ M ++ +SWNSMI+ NE EEA+ F +
Sbjct: 504 CTAIDNACSVFQLMPSKDTVSWNSMISGLD---------------HNERFEEAVSCFHTM 548
Query: 208 QREGMAPDWCTFSIV--LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+R GM P FS++ L +C+ L +H K+G + D ++NAL+ YA
Sbjct: 549 KRNGMVPS--NFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETD 606
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALH-GQAKEALQLFSNM---NVQPDSATFVSLL 321
SI+ ++VF +M +D VSWNS + A A + +AL+ F M +P+ TF+++L
Sbjct: 607 SINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINIL 666
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
+A S ++ G+++ H+++ + V ++ G+ ++ + E + M D
Sbjct: 667 AAVSSFSVLGLGHQI-HALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRD 725
Query: 382 SVIWSVLL 389
V W+ ++
Sbjct: 726 EVSWNSMI 733
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+AT+ ACA +++ M++H + D+ V + L++MYAK G +D A F+
Sbjct: 764 FATVLSACASVATLERGMEVHACAVR--ACLESDVVVGSALVDMYAKCGKIDYASRFFEL 821
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYL 120
MP RN+ SW ++ISGYA+HG+ ++ ++F + Q+ P+ + VL +C ++
Sbjct: 822 MPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHV 875
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
A+ +H + K GF DD N LI+ Y R G++ ++++FD+M +LVSW+ ++ Y
Sbjct: 159 ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ 218
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+ EA LF + + P+ S L AC G
Sbjct: 219 NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/596 (34%), Positives = 330/596 (55%), Gaps = 29/596 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+ AC+ + ++H ++I + + FV + L++MYA + AR +FD
Sbjct: 122 FASALPACSRLELLDVGREMHAYVIKD-DELAANSFVASALVDMYATHEQVGKARQVFDM 180
Query: 68 MPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC---DYL 120
+P + + W A+I GYAQ G EE RLF + F P E ++ASVL +C +
Sbjct: 181 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 240
Query: 121 HGK-LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH +K + + +V NAL++MY++ D A ++F ++ +V+SWN++I
Sbjct: 241 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG- 299
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
C ++ + F + +QL+ G+ P+ T +L CA L +
Sbjct: 300 --CVVQGHVADAFQLARE-------MQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 350
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H ++ + D + +AL+ YA+CG ++LS+ VFD++ + ++WN ++ AY +HG
Sbjct: 351 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 410
Query: 299 KEALQLFSNMNV----QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EA LF M +P+ TF++ L+ACSH+G+V G ++FH+M +HGV P D A
Sbjct: 411 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 470
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C+VD+LGR GR+ EA ++ M V WS +LG+CR H L E+A +L +LEP
Sbjct: 471 CVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 530
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
++ +V + NIY +G + +A +R M+ V K PG SWIE++ +H F +G HP
Sbjct: 531 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 590
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
E + +E L G++ GY P+TS LHD+++ K L HSEKLA+ F ++
Sbjct: 591 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAP- 649
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR+ KN+R+C DCH K S ++G+EIV+RD RFHHF++ CSC DYW
Sbjct: 650 ---GATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 31/401 (7%)
Query: 13 HACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF-DEMPKR 71
H A ++ + H + N F N L++MYA+ G + DA+ LF P R
Sbjct: 22 HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGR 81
Query: 72 -NVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLV 125
+VV+W ++S Q G +E + ++ P+ + AS L +C L G+ +
Sbjct: 82 GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 141
Query: 126 HALALKFS-LDAHVYVANALINMYSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRAC 181
HA +K L A+ +VA+AL++MY+ +A +VF+ + + + WN+MI +
Sbjct: 142 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 201
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ +A+ LFA+M+ E G P T + VL ACA AVH
Sbjct: 202 GMDEEALRLFARMEAE------------AGFVPCETTMASVLPACARSEAFAGKEAVHGY 249
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K G + + NAL+ YAR G +++++F + D+VSWN+++ + G +A
Sbjct: 250 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 309
Query: 302 LQLFSNM------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
QL M V P++ T ++LL C+ G ++ H H + + +
Sbjct: 310 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI-HGYAVRHALDTDVAVGSA 368
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+VD+ + G + + + +P +++ W+VL+ + HG
Sbjct: 369 LVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMHG 408
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/595 (35%), Positives = 334/595 (56%), Gaps = 30/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++T AC G ++ MQ+H + + V N I+MY+K G + A +F++
Sbjct: 108 FSTSLKACGALGVVENGMQIHGMCVKSGFEWVS--VVGNATIDMYSKCGRIGMAEQVFNK 165
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----G 122
MP RN+VSW A+I+G+ GN + LF + Q P+EF+ S L +C L G
Sbjct: 166 MPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGG 225
Query: 123 KLVHA--LALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
+HA + F + +A+A++++Y+K C EA KVF+ +E +N+ISW+++I F
Sbjct: 226 TQIHASLITRGFPISIRNIIASAIVDLYAK-CGYLFEAQKVFDRIEQKNLISWSALIQGF 284
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ N EA+ LFRQL+ D SI++ A L +
Sbjct: 285 -------------AQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQM 331
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H I K D +AN++I Y +CG ++++F +M ++VSW ++ Y HG
Sbjct: 332 HCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLG 391
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++A+ LF+ M ++ D +++LLSACSH+GL++E + F + NH + P ++HYAC
Sbjct: 392 EKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYAC 451
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVD+LGR G++ EA+ LI M ++P+ IW LL +CR HG + L +++ +
Sbjct: 452 MVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDN 511
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +V MSNIY +G + + +RK +K ++K G SW+EI +H F G HP
Sbjct: 512 PVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLT 571
Query: 476 EAIFKKLEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
E I + L+E+ ++K +GY ALHD+EEE KEE L HSEKLA+ A++ G +
Sbjct: 572 EKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDG-ME 630
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ VIR+ KN+R+C DCH F+K S +L K VVRD+NRFH F+D +CSC DYW
Sbjct: 631 KKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 209/405 (51%), Gaps = 34/405 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q A L C+ +G Q +Q+H +N DL + N LI+MY K +D A +F
Sbjct: 5 QRLAKLLRNCSKNGLFDQGLQVHAAAVN--MGFGFDLIMNNDLIDMYGKCSRVDLACSVF 62
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL---- 120
D M +RNVVSWTAL+ GY Q GNA+ L C + PNEF+ ++ L +C L
Sbjct: 63 DRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVE 122
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAF 178
+G +H + +K + V NA I+MYSK C A +VF M FRN++SWN+MIA
Sbjct: 123 NGMQIHGMCVKSGFEWVSVVGNATIDMYSK-CGRIGMAEQVFNKMPFRNLVSWNAMIAG- 180
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
N ++L LF+++Q +G PD TF+ LKAC L R + +
Sbjct: 181 ------------HTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQI 228
Query: 239 HSLIAKYGFEDD--TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
H+ + GF +IA+A++ YA+CG + +++VFD++ +L+SW+++++ +A G
Sbjct: 229 HASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEG 288
Query: 297 QAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
EA+ LF + D ++ + LV++G ++ +L+ V LD
Sbjct: 289 NLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILK---VPSGLDIS 345
Query: 354 AC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + G EAE+L EM + + V W+V++ KHG
Sbjct: 346 VANSIIDMYLKCGLTEEAERLFSEMQVR-NVVSWTVMITGYGKHG 389
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 324/564 (57%), Gaps = 36/564 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV +MY K G+ DA ++FDEMP+RN+ +W A IS Q + + F L
Sbjct: 142 DVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFL 201
Query: 101 -QYFFPNEFSLASVLISC-DYLH---GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ PN + + L +C D + G+ +HA ++ V VAN LI+ Y K C D
Sbjct: 202 CVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGK-CGDI 260
Query: 155 -EAWKVFENMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A VF + R NV+SW SM+AA + EE A +F Q ++E
Sbjct: 261 VSAEMVFNRIGNRKNVVSWCSMLAAL-------------VQNHEEERACMVFLQARKEVE 307
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D+ S VL ACA L +VH+L K ED+ + +AL+ Y +CGSI ++Q
Sbjct: 308 PTDF-MISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQ 366
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN-----VQPDSATFVSLLSACSHA 327
VF ++ +LV+WN+++ YA G AL+LF M ++P T +S+LS CS
Sbjct: 367 VFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRV 426
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G V+ G ++F SM N+G+ P +H+AC+VDLLGR G + A + I+ M ++P +W
Sbjct: 427 GAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGA 486
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LLG+CR HG+T L ++AA KL +L+ DS V +SN+ +G + +A ++RKEMK +
Sbjct: 487 LLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGI 546
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K G SWI ++NR+H F + H + I L +L G +K GYVP+T+L+L D+E+
Sbjct: 547 KKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLED 606
Query: 508 EHKEEQLYHHSEKLALVFAI--MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
E K ++++HSEK+AL F + + QG IRI KN+RIC DCH+ +K S ++G+
Sbjct: 607 EEKASEVWYHSEKIALAFGLIALPQG------VPIRITKNLRICGDCHSAIKFISRIVGR 660
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI+VRD++RFH FKD CSC DYW
Sbjct: 661 EIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 193/391 (49%), Gaps = 39/391 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H+I P F++NHL+NMY+K L+ A+H+ R VV+WT+LISG +
Sbjct: 28 IHAHIIRTHVT-PLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHN 86
Query: 87 GNAEECFRLFCSLLQYFF--------PNEFSLASVLISCDYLH----GKLVHALALKFSL 134
R F L +F PN+F+ V + ++ GK +H LALK +
Sbjct: 87 -------RRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGM 139
Query: 135 DAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V+V + +MY K+ +A +F+ M RN+ +WN+ I + A++
Sbjct: 140 IYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYI---------SNAVQ---- 186
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+ +A+ F++ P+ TF L AC +V +H+ I + G+++D +
Sbjct: 187 DRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSV 246
Query: 254 ANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKEALQLF--SNMNV 310
AN LI Y +CG I ++ VF+++ ++VSW S+L A + + + A +F + V
Sbjct: 247 ANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEV 306
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+P S+LSAC+ G ++ G V H++ V + + +VD+ G+ G I AE
Sbjct: 307 EPTDFMISSVLSACAELGGLELGRSV-HALAVKACVEDNIFVGSALVDMYGKCGSIENAE 365
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
++ E+P E + V W+ ++G G+ +A
Sbjct: 366 QVFSELP-ERNLVTWNAMIGGYAHQGDIDMA 395
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 323/558 (57%), Gaps = 32/558 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V+ +++ Y K G ++ AR +FD MP RN VSW A+I GYA +GNA E LF ++Q
Sbjct: 156 VSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEG 215
Query: 104 FP-NEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
+ S+ + L +C L + VH L ++ L ++V V NALI Y+K AD A
Sbjct: 216 VDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAA 275
Query: 158 KVFENMEFRNV-ISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGMAP 214
+VF + + ISWN+MI F +NE E+A LF ++Q E + P
Sbjct: 276 QVFNELGNKKTRISWNAMILGF---------------TQNECPEDAERLFARMQLENVRP 320
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T V+ A A + A +H ++ + D + ALI Y++CG +S+++++F
Sbjct: 321 DSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLF 380
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQ 331
D +++WN+++ Y HG + A++LF M P+ TF+S+L+ACSHAGLV
Sbjct: 381 DSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVD 440
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG K F SM +++G+ P ++HY MVDLLGR G++ EA I+ MP+EP ++ +LG+
Sbjct: 441 EGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGA 500
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ H LAE +A + +L P + + V ++NIY + + +R M+ ++K P
Sbjct: 501 CKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTP 560
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S I+++N VH F SG H + I+ +L +LI ++K MGYVP+T ++HD+E++ K
Sbjct: 561 GWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTD-SIHDVEDDVKA 619
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L HSEKLA+ + ++ + I+I KN+R+C DCHN KL S L G+EI++RD
Sbjct: 620 QLLNTHSEKLAIAYGLIRTAP----GTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRD 675
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHFKD CSC DYW
Sbjct: 676 IQRFHHFKDGKCSCGDYW 693
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 193/408 (47%), Gaps = 39/408 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHM-INNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ + L CA ++ +H + +E + L NMY K DAR +
Sbjct: 17 RTFTALLKLCAARADLATGRAVHAQLEARGLASES---IASTALANMYFKCRRPADARRV 73
Query: 65 FDEMPKRNVVSWTALISGYAQHG---NAEECFRLFCSLLQYFFPNEFSLASVLISC---D 118
FD MP R+ V+W A+++GYA++G +A E P+ +L SVL +C
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 119 YLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIA 176
LH + VHA AL+ LD V V+ A+++ Y K A EA + VF+ M RN +SWN+M
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAM-- 191
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
I+ +A N EA+ LF ++ +EG+ + L+AC L
Sbjct: 192 -----------IDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVR 240
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL-VSWNSILKAYALH 295
VH L+ + G + + NALI YA+C L+ QVF+++ +SWN+++ + +
Sbjct: 241 RVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQN 300
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
++A +LF+ M NV+PDS T VS++ A + + + + + + QLD
Sbjct: 301 ECPEDAERLFARMQLENVRPDSFTLVSVIPAVADI-----SDPLQARWIHGYSIRHQLDQ 355
Query: 353 ----YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + GR+ A +L + + + W+ ++ HG
Sbjct: 356 DVYVLTALIDMYSKCGRVSIARRLF-DSARDRHVITWNAMIHGYGSHG 402
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 145/315 (46%), Gaps = 27/315 (8%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMI 175
D G+ VHA L + + AL NMY K C +A +VF+ M R+ ++WN+++
Sbjct: 31 DLATGRAVHAQLEARGLASESIASTALANMYFK-CRRPADARRVFDRMPSRDRVAWNAVV 89
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A + L + A+E +M+ EE G PD T VL ACA
Sbjct: 90 AGYARNGLPSSAMEAVVRMQGEEG-----------GERPDSVTLVSVLPACADARALHAC 138
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VH+ + G ++ ++ A++ AY +CG++ ++ VFD M + VSWN+++ YA +
Sbjct: 139 REVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADN 198
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G A EA+ LF M V A+ ++ L AC G + E +V H +L G+ +
Sbjct: 199 GNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRV-HELLVRVGLSSNVSV 257
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-----GSCRKHGETRLAELAATK 407
++ + R A ++ E+ + + W+ ++ C + E A + +
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM---Q 314
Query: 408 LKQLEPGDSLGFVQM 422
L+ + P DS V +
Sbjct: 315 LENVRP-DSFTLVSV 328
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 23 QAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISG 82
QA +H + I + + QD++V LI+MY+K G + AR LFD R+V++W A+I G
Sbjct: 340 QARWIHGYSIRHQLD--QDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397
Query: 83 YAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVH-------ALALKFSL 134
Y HG + LF + PNE + SVL +C H LV ++ + L
Sbjct: 398 YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACS--HAGLVDEGQKYFASMKKDYGL 455
Query: 135 DAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVIS-WNSMIAAFRACKLEAQAIELFA 192
+ + ++++ ++ DEAW +NM IS + +M+ ACKL + +EL
Sbjct: 456 EPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLG---ACKLH-KNVEL-- 509
Query: 193 KMKNEEEALFLFRQLQREGM 212
EE A +F EG+
Sbjct: 510 ---AEESAQIIFELGPEEGV 526
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/535 (39%), Positives = 312/535 (58%), Gaps = 31/535 (5%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY---FFPNEFSLASVLISC----DYL 120
MP+R++V+W +LISGYA G +CF + +++ F PNE + S++ +C +
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G +H L +K + V V NAL+N+Y K+ D + K+FE++ +N++SWN+MI
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKT-GDLISSCKLFEDLSVKNLVSWNTMIVIH 119
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
L EE L F + G+ PD TF VL+ C + R + +
Sbjct: 120 LQNGLA-------------EEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGI 166
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H LI GF +T I AL+ YA+ G + S VF ++T D ++W ++L AYA HG
Sbjct: 167 HGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYG 226
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++A++ F M + PD TF LL+ACSH+GLV+EG F +M + + + P+LDHY+C
Sbjct: 227 RDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSC 286
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDL+GR G + +A LI+EMPMEP S +W LLG+CR + +T+L AA +L +LEP D
Sbjct: 287 MVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRD 346
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
++ +SNIY SG + A IR MK + + G S+IE N++H+F G HP+
Sbjct: 347 GRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPES 406
Query: 476 EAIFKKLEELIGQLKG-MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
E I KKL+E+ ++K +G+ T LHD++E+ KEE + HSEK+A+ F ++ +
Sbjct: 407 EKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPM- 465
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E +IR KN+RIC DCH K S + + I++RDS RFHHF + CSC DYW
Sbjct: 466 -EPIIIR--KNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 517
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 154/343 (44%), Gaps = 55/343 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC GN ++ + +H ++ + +++ V N L+N+Y K G L + LF++
Sbjct: 46 FLSMISACVHGGNKEEGVCIHGLVMKS--GVLEEVKVVNALMNLYGKTGDLISSCKLFED 103
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----G 122
+ +N+VSW +I + Q+G AEE F S P++ + +VL C+ +
Sbjct: 104 LSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLS 163
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H L + +A+ + AL+++Y+K +++ VF + + ++W +M+AA+
Sbjct: 164 QGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATH 223
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
AI+ F M + G++PD TF+ +L AC +GLV E
Sbjct: 224 GYGRDAIKHFELMVH-------------YGLSPDHVTFTHLLNACSHSGLVEE------- 263
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+Y FE ++S ++ ++ + ++ ++ G +
Sbjct: 264 ---GRYYFE-----------------TMSKRYRIEPRLDH-----YSCMVDLMGRSGLLQ 298
Query: 300 EALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
+A L M ++P S + +LL AC Q G K + E
Sbjct: 299 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFE 341
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/556 (38%), Positives = 332/556 (59%), Gaps = 26/556 (4%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+V + +++MY + ++D+A +FD + NV ++ ++I+G+ G + + S+++
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRN 208
Query: 103 FFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
+ S +VL C + + G VH ALK L+ +VYV +AL++MY K EA
Sbjct: 209 VGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEA 268
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+VFE + +N++SW +++ A+ ELF E+AL LF ++ EG+ P+
Sbjct: 269 NRVFEVLPEKNIVSWTAIMTAY-------TQNELF------EDALQLFLDMEMEGVRPNE 315
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T+++ L +CAGL T ++ +A+ + K G + NAL++ Y++ GS+ +++VF
Sbjct: 316 FTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLS 375
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M D+VSWNSI+ YA HG+A+EA++ F +M P TF+ +LSAC+ GLV EG
Sbjct: 376 MPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEG 435
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ M++ GV P +HY CMV LL RVGR+ EAE+ I + D V W LL SC+
Sbjct: 436 FYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQ 495
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
+ L A ++ QL+P D +V +SN+Y + ++ +R+ M+ VRK PG+
Sbjct: 496 VYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGV 555
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWI++ + VH F S K+HP E I KKL+ELI ++K +GYVP ++ALHD+E+E KEE
Sbjct: 556 SWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEH 615
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L +HSEKLAL F ++ + IRIMKN+RIC DCH +KL S G+ IVVRD+
Sbjct: 616 LMYHSEKLALAFGLIRT----PKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTV 671
Query: 574 RFHHFKDRICSCNDYW 589
RFH +D +CSC+DYW
Sbjct: 672 RFHCIEDGVCSCDDYW 687
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 181/372 (48%), Gaps = 31/372 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ N+LI +Y K G L AR +FD MP RN VS L+SGYA G + L +
Sbjct: 49 DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALL--RV 106
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
F NE+ L+S + + Y G+ H A+K L H YV +A+++MY + CA D
Sbjct: 107 ADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQ-CAHMD 165
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA KVF+N+ NV ++NSMI F + + + R + R
Sbjct: 166 EAVKVFDNVSSFNVFAFNSMING-------------FLDRGQMDGSTSIVRSMVRNVGQW 212
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D ++ VL CA S VH+ K E + + +AL+ Y +C + +VF
Sbjct: 213 DHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVF 272
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+ + ++VSW +I+ AY + ++ALQLF +M V+P+ T+ L++C+ ++
Sbjct: 273 EVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLK 332
Query: 332 EGNKVFH-SMLENH-GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
GN + +M H G++P + ++++ + G + +A ++ MP D V W+ ++
Sbjct: 333 NGNALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSII 388
Query: 390 GSCRKHGETRLA 401
HG R A
Sbjct: 389 IGYAHHGRAREA 400
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 160/327 (48%), Gaps = 33/327 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + CA + Q+H + +++V + L++MY K + +A +F+
Sbjct: 217 YVAVLGHCASTKEVVLGSQVHTQALKR--RLELNVYVGSALVDMYGKCDFPHEANRVFEV 274
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HG 122
+P++N+VSWTA+++ Y Q+ E+ +LF + ++ PNEF+ A L SC L +G
Sbjct: 275 LPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNG 334
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ A +K + V NAL+NMYSKS ++A +VF +M R+V+SWNS+I +
Sbjct: 335 NALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHH 394
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVH 239
+A+E F M EE P + TF VL ACA GLV E ++
Sbjct: 395 GRAREAMEAFHDMLFAEE-------------VPSYVTFIGVLSACAQLGLVDEGF-YYLN 440
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSIL---KAYALH 295
++ + G + ++ R G + +++ + D+V+W S+L + Y +
Sbjct: 441 IMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNY 500
Query: 296 GQA-KEALQLFSNMNVQP-DSATFVSL 320
G + A Q+F ++P D T+V L
Sbjct: 501 GLGHRVAEQIF---QLKPKDVGTYVLL 524
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
AVH+ + + D V N LI Y +CG + L++QVFD M + VS N ++ YA
Sbjct: 35 GKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93
Query: 295 HGQAKEALQLFSNMNVQPDSATFVSLLSACSH 326
G+ ++AL L + + S ++A +H
Sbjct: 94 SGRHRDALALLRVADFGLNEYVLSSAVAATAH 125
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/581 (37%), Positives = 332/581 (57%), Gaps = 35/581 (6%)
Query: 16 ALHGNIKQAMQLHEHMINN--FPNE------PQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A G + Q +H + I PN + + L++MYAK G L AR +FD
Sbjct: 124 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 183
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISC---DYLH- 121
MP RN V+W+ALI G+ + F LF ++L F + S+AS L +C D+L
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 243
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +HAL K + A + N+L++MY+K+ D+A +F+ M ++ +S++++++ +
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY-- 301
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ EEA +F+++Q + PD T ++ AC+ L +H H
Sbjct: 302 -----------VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ G +T I NALI YA+CG I LS+QVF+ M D+VSWN+++ Y +HG KE
Sbjct: 351 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 410
Query: 301 ALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A LF +N+ PD TF+ LLSACSH+GLV EG FH M +G+ P+++HY CMV
Sbjct: 411 ATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMV 470
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLL R G + EA + I+ MP+ D +W LLG+CR + L + + +++L P +
Sbjct: 471 DLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG 530
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
FV +SNIY +G F++A +R K +K PG SWIEI +H F G + HPQ
Sbjct: 531 NFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPE 590
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+++L+ ++ +K +GY P+TS L D+EEE KE+ L HSEKLA+ + I+ SL ++
Sbjct: 591 IYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGIL---SLSEDK 647
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
++ + KN+R+C DCH +K S + + I+VRD+NRFHHF
Sbjct: 648 TIF-VTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 201/417 (48%), Gaps = 40/417 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H I+ DLFV+ L++MY K L DA H+F MP R++V+W A+++GYA H
Sbjct: 32 IHRHAIH--AGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 89
Query: 87 GNAEECFRLFCSL---LQYFFPNEFSLASVLI----SCDYLHGKLVHALAL--------- 130
G S+ + PN +L ++L G VHA +
Sbjct: 90 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRN 149
Query: 131 -KFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
K L V + AL++MY+K C A +VF+ M RN ++W+++I F C QA
Sbjct: 150 SKSKLTDGVLLGTALLDMYAK-CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
LF M + ++P + + L+ACA L R +H+L+AK G
Sbjct: 209 FLLFKAMLAQGLCF----------LSPT--SIASALRACASLDHLRMGEQLHALLAKSGV 256
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D N+L+ YA+ G I + +FD+M D VS+++++ Y +G+A+EA +F
Sbjct: 257 HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 316
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M NV+PD+AT VSL+ ACSH +Q G + H + G+ + ++D+ + G
Sbjct: 317 MQACNVEPDAATMVSLIPACSHLAALQHG-RCSHGSVIIRGLASETSICNALIDMYAKCG 375
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFV 420
RI + ++ MP D V W+ ++ HG + A ++ L P D + F+
Sbjct: 376 RIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 431
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 154/330 (46%), Gaps = 34/330 (10%)
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
PN ++ L +C D+ G+ +H A+ L A ++V+ AL++MY K +C +A +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F M R++++WN+M+A + M + A L Q+Q + P+ T
Sbjct: 68 FATMPARDLVAWNAMLAGYA-----------HHGMYHHAVAHLLSMQMQMHRLRPNASTL 116
Query: 220 SIVLKACAGLVTERHASAVHSLI----------AKYGFEDDTVIANALIHAYARCGSISL 269
+L A ++VH+ +K D ++ AL+ YA+CGS+
Sbjct: 117 VALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY 176
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP----DSATFVSLLSACS 325
+++VFD M + V+W++++ + L + +A LF M Q + S L AC+
Sbjct: 177 ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA 236
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
++ G ++ H++L GV L ++ + + G I +A L EM ++ D+V +
Sbjct: 237 SLDHLRMGEQL-HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSY 294
Query: 386 SVLLGSCRKHGETRLAELAATKLK--QLEP 413
S L+ ++G A L K++ +EP
Sbjct: 295 SALVSGYVQNGRAEEAFLVFKKMQACNVEP 324
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R +AP+ TF LKAC+ L A+H G + D ++ AL+ Y +C +
Sbjct: 3 RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 62
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ-----PDSATFVSLLSA 323
+ +F M DLV+WN++L YA HG A+ +M +Q P+++T V+LL
Sbjct: 63 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 122
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYA----------CMVDLLGRVGRILEAEKLI 373
+ G + +G V H+ + P + + ++D+ + G +L A ++
Sbjct: 123 LAQQGALAQGTSV-HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVF 181
Query: 374 REMPMEPDSVIWSVLLGS 391
MP + V WS L+G
Sbjct: 182 DAMPAR-NEVTWSALIGG 198
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/585 (37%), Positives = 340/585 (58%), Gaps = 38/585 (6%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
I Q + +H +I N QD F+ L+ +K +D A +F NV +TALI
Sbjct: 52 INQVLPIHAQLIRN--GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 109
Query: 81 SGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLD 135
G+ GN E +L+ +L + P+ + +AS+L +C G+ VH+ ALK
Sbjct: 110 DGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFS 169
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENME----FRNVISWNSMIAAFRACKLEAQAIE 189
++ V ++ +Y K C + +A +VFE M ++ + W +MI F
Sbjct: 170 SNRLVRLRIMELYGK-CGELGDARRVFEEMPEDVVAKDTVCWTAMIDGF----------- 217
Query: 190 LFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
++NEE AL FR +Q E + P+ T VL AC+ L VHS + K+
Sbjct: 218 ----VRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 273
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E + + NALI+ Y+RCGSI ++ VFD+M D++++N+++ +++G++++A++LF
Sbjct: 274 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 333
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M ++P + TFV +L+ACSH GLV G ++FHSM ++ V PQ++HY CMVDLLGRVG
Sbjct: 334 MVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVG 393
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
R+ EA LIR M M PD ++ LL +C+ H L E A +L+ DS +V +S+
Sbjct: 394 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSH 453
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
+Y SG + +A +R +MK + ++K PG S IE+ N +HEF G RHPQ+E I++KLEE
Sbjct: 454 VYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEE 513
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
L L+ GY PE + L DIE+ KE L HSE+LA+ + +++ ++IR+MK
Sbjct: 514 LNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPC----TMIRVMK 569
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N+R+C DCH+ +KL + + ++IVVRD NRFH+F++ CSC DYW
Sbjct: 570 NLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 614
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 118/279 (42%), Gaps = 18/279 (6%)
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+ Q I L + ++ + L + QL R G + D +L++C+ HA S I
Sbjct: 39 QKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC----HAIDYASRIF 94
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN----SILKAYALHGQAK 299
+Y + + ALI + G+ + Q++ +M + ++ N SILKA +
Sbjct: 95 QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALR 154
Query: 300 EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
E ++ S + + + ++ G + + +VF M E+ V + M
Sbjct: 155 EGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPED-VVAKDTVCWTAM 213
Query: 357 VDLLGR---VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+D R R LEA + ++ + P+ +L +C + G + + +++ E
Sbjct: 214 IDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 273
Query: 414 GDSLGFV--QMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+L FV + N+Y GS ++A+ + EMK V Y
Sbjct: 274 ELNL-FVGNALINMYSRCGSIDEAQTVFDEMKDRDVITY 311
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/595 (37%), Positives = 344/595 (57%), Gaps = 30/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ ACA + Q ++H ++ + +++ V N +I MY K G + A +F+
Sbjct: 364 YLSVLEACANLEALSQGREIHARVLLCGLLQ-REVAVGNSVITMYGKCGQTEAAMSVFEA 422
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----G 122
MP+++ VSW A+I+ + ++ LF + L+ NEF+L S+L +C L
Sbjct: 423 MPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLA 482
Query: 123 KLVHALALKFSLDAH-VYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
+ +HA A + V N+++NMY++ C +A K F+++E + +++W+ ++AA+
Sbjct: 483 RQIHARAAAGGFGGNSTAVGNSVVNMYAR-CGSLLDAKKAFDSLEEKGLVAWSIILAAY- 540
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
AQ+ K A F++++ EG+ P TF L ACA + T H ++H
Sbjct: 541 -----AQS-----KDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMH 590
Query: 240 SLIAKYGF-EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
A GF E V+ N +I+ Y +CGS S +K VFD+M L+SWNS++ AYA +G A
Sbjct: 591 RRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHA 650
Query: 299 KEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
EAL M +Q PDS T VS+L SHAGL++ G + F S +++HG+ P C
Sbjct: 651 LEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKC 710
Query: 356 MVDLLGRVGRILEAEKLIREMPM-EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
+VDLL R G + AE+LI P + D++ W LL +C+ +G+ + A ++ +LEP
Sbjct: 711 LVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQ 770
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
S FV ++N+Y G ++ A IRK M+ V+K PG SWIE+ VHEF SG +HP+
Sbjct: 771 HSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPK 830
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I + LE+L +++ GYVP+T+ +HD+EE KEE L HSE+LA+VF +M+
Sbjct: 831 IREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMST---- 886
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R IR++KN+R+C DCH K+ S ++G+EIVVRDS+RFHHFK CSC D+W
Sbjct: 887 RPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 183/357 (51%), Gaps = 26/357 (7%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFS 109
MY K + DA +FD + +NV SWT +++ Y+Q+G+ E LF + + P++
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 110 LASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE--AWKVFENM 163
L +C + HG+ +H+ + L +++ ++N+L+NMY K C D A KVF+ M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGK-CQDVPCAEKVFDGM 119
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
R+V+SW +M+A + +QA+E ++M EG+ P+ TF ++
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRM-------------DAEGVKPNQVTFVTIV 166
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
CA L +H I G E D ++ NAL+H Y CGS K VF +M ++
Sbjct: 167 DVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVL 226
Query: 284 SWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
W +++ + +GQ +E L +F M+ V+ + T++S++ C + V+EG + +
Sbjct: 227 LWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARI 286
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
LE+ L + ++ L G+ G IL+ K + E + D V W+ ++ +C ++G+
Sbjct: 287 LESPFCSSTLLATS-LISLYGQCG-ILDRAKGLLEHMYQRDVVAWNAMVTACAQNGD 341
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 193/395 (48%), Gaps = 31/395 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ ACA G + Q+H ++ + ++ ++N L+NMY K + A +FD
Sbjct: 60 VFVIALDACAASGELDHGRQIHSSVVGS--GLTSNIIISNSLVNMYGKCQDVPCAEKVFD 117
Query: 67 EMPKRNVVSWTALISGYAQHG---NAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH-- 121
M R+VVSWTA+++ YAQ+G A EC + + PN+ + +++ C L
Sbjct: 118 GMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDA--EGVKPNQVTFVTIVDVCAKLRLL 175
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAA 177
G+ +H + L+ + NAL++MY SC D+ VF M +V+ W +MIA
Sbjct: 176 DLGRKIHHRIINEGLEPDGILGNALVHMYG-SCGSFDDMKSVFSRMGQSSVLLWTTMIAG 234
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
C Q EE L +FR++ EG+ + T+ +++ C L +
Sbjct: 235 ---CSQNGQY----------EEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEM 281
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+ + I + F T++A +LI Y +CG + +K + + M D+V+WN+++ A A +G
Sbjct: 282 IDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGD 341
Query: 298 AKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EA+ L M+++ + T++S+L AC++ + +G ++ +L + ++
Sbjct: 342 NWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGN 401
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++ + G+ G+ A + MP D V W+ ++
Sbjct: 402 SVITMYGKCGQTEAAMSVFEAMP-RKDDVSWNAVI 435
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/625 (36%), Positives = 344/625 (55%), Gaps = 55/625 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
FLH Q+ CA + A +LH +I ++ ++N L+++Y K G +
Sbjct: 6 FLHQLQL-------CARRQSASAAGELHSQIIKAGFDKSS--LLSNTLLDVYGKCGLIPQ 56
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF------PNEFSLASVL 114
A LFDEMP R+ VSW ++++ + N R S+L F P+ F A ++
Sbjct: 57 ALQLFDEMPNRDHVSWASILTAH----NKALIPRRTLSMLNTMFTHDGLQPDHFVFACIV 112
Query: 115 ISCDYLH----GKLVHA-LALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRN 167
+C L GK VHA L D V V ++LI+MY+K C DEA VF+++ F+N
Sbjct: 113 RACSSLGYLRLGKQVHARFMLSXFCDDEV-VKSSLIDMYTK-CGQPDEARAVFDSILFKN 170
Query: 168 VISWNSMIAAFRACKLEAQAIELF--AKMKN--EEEALF--------------LFRQLQR 209
+SW SMI+ + + +A++LF A ++N AL LF +++R
Sbjct: 171 SVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRR 230
Query: 210 EGM-APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
EG+ D S V+ CA L +H L+ GFE I+NAL+ YA+C I
Sbjct: 231 EGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDIL 290
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
+K +F +M D++SW SI+ A HG+A+EAL L+ M ++P+ TFV LL ACS
Sbjct: 291 AAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACS 350
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
HAGLV G ++F SM ++ + P L HY C++DLL R G + EAE L+ ++P +PD W
Sbjct: 351 HAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTW 410
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
+ LL +C +H + A ++ L+P D ++ +SN+Y + + +RK M
Sbjct: 411 ASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSM 470
Query: 446 RVRKYPGLSWIEIENRVHEFASGGK-RHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
VRK PG S I+ F +G HP + I L++L +++ GYVP TS L+D
Sbjct: 471 EVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYD 530
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
IE++ KE+QL+ HSE+LA+ + ++ ++IRI+KN+RIC DCHN +K SD++
Sbjct: 531 IEQQEKEKQLFWHSERLAVAYGLLK----AVPGTIIRIVKNLRICGDCHNVLKFISDIVK 586
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD+ R+HHFK+ CSCND+W
Sbjct: 587 REIMVRDATRYHHFKEGKCSCNDFW 611
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/595 (35%), Positives = 341/595 (57%), Gaps = 36/595 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G + Q+H H+I +++V + LI+MYAK+G L A +
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKT--GFQLNVYVCSVLIDMYAKYGQLALALRILRR 523
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL----LQYFFPNEFSLASVLISCDYL--- 120
+P+ +VVSWTA+I+GY QH E +LF + +Q+ + AS + +C +
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF---DNIGFASAISACAGIRAL 580
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAA 177
G+ +HA + A + + NALI++Y++ C EA+ FE + +N ISWNS+++
Sbjct: 581 RQGQQIHAQSYAAGFGADLSINNALISLYAR-CGRIQEAYLAFEKIGDKNNISWNSLVSG 639
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+A+++F +M E + +F T+ + A A L +
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEVNMF-------------TYGSAISAAASLANIKQGQQ 686
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+HS++ K G++ + ++N+LI YA+ GSIS + + F+ M+ +++SWN+++ Y+ HG
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGC 746
Query: 298 AKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EAL+LF M V P+ TFV +LSACSH GLV+EG F SM + H +VP+ +HY
Sbjct: 747 GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYV 806
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VDLLGR G++ A + I+EMP+ D++IW LL +C H + E AA L +LEP
Sbjct: 807 CVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPE 866
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
DS +V +SNIY +S + RK MK V+K PG SWIE++N VH F +G K HP
Sbjct: 867 DSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPL 926
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I++ + L + +GYV ++ L++ E+ K+ + HSEKLA+ F +++ G+
Sbjct: 927 TNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGN-- 984
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+R+C DCHN++K S + + I+VRD++RFHHF +CSC D+W
Sbjct: 985 --NIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 187/366 (51%), Gaps = 26/366 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+ +V N L+ +Y++ L A +F M R+ VS+ +LISG Q G ++ LF +
Sbjct: 295 ETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQ 354
Query: 101 QYFF-PNEFSLASVLISC---DYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ P+ ++AS+L +C LH G +H+ A+K + A + + +L+++YSK CAD
Sbjct: 355 RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK-CADV 413
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A K F E N++ WN M+ A+ ++ N ++ +FRQ+Q EGM
Sbjct: 414 ETAHKFFLTTETENIVLWNVMLVAY-------------GQLDNLSDSFEIFRQMQMEGMI 460
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T+ +L+ C L +H+ + K GF+ + + + LI YA+ G ++L+ ++
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
++ D+VSW +++ Y H EALQLF M +Q D+ F S +SAC+ +
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++G ++ H+ G L ++ L R GRI EA L E + +++ W+ L+
Sbjct: 581 RQGQQI-HAQSYAAGFGADLSINNALISLYARCGRIQEA-YLAFEKIGDKNNISWNSLVS 638
Query: 391 SCRKHG 396
+ G
Sbjct: 639 GLAQSG 644
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 29/395 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
Q Y L C G++ + M+LH + + F EP + + L++ Y + G A +
Sbjct: 59 QNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEP---LLIDSLVDNYFRHGDQHGAVKV 115
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC-----D 118
FDE R+V SW +I + + + F LF +L + PN ++ A VL +C
Sbjct: 116 FDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIA 175
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
+ + K VH+ + D+ VAN LI++YSK+ + A KVF + +++++W +MI+
Sbjct: 176 FNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISG 235
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
LE +AI LF M E + P S VL A +
Sbjct: 236 LSQNGLEEEAILLFCDMHASE-------------IFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H L+ K+GF +T + N L+ Y+R + ++++F M D VS+NS++ G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 298 AKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+ AL+LF+ M ++PD T SLLSAC+ G + +G ++ HS G+ +
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQL-HSHAIKAGMSADIILEG 401
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++DL + + A K E + V+W+V+L
Sbjct: 402 SLLDLYSKCADVETAHKFFLTTETE-NIVLWNVML 435
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/595 (35%), Positives = 341/595 (57%), Gaps = 36/595 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G + Q+H H+I +++V + LI+MYAK+G L A +
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKT--GFQLNVYVCSVLIDMYAKYGQLALALRILRR 523
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL----LQYFFPNEFSLASVLISCDYL--- 120
+P+ +VVSWTA+I+GY QH E +LF + +Q+ + AS + +C +
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF---DNIGFASAISACAGIRAL 580
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAA 177
G+ +HA + A + + NALI++Y++ C EA+ FE + +N ISWNS+++
Sbjct: 581 RQGQQIHAQSYAAGFGADLSINNALISLYAR-CGRIQEAYLAFEKIGDKNNISWNSLVSG 639
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+A+++F +M E + +F T+ + A A L +
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEVNMF-------------TYGSAISAAASLANIKQGQQ 686
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+HS++ K G++ + ++N+LI YA+ GSIS + + F+ M+ +++SWN+++ Y+ HG
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGC 746
Query: 298 AKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EAL+LF M V P+ TFV +LSACSH GLV+EG F SM + H +VP+ +HY
Sbjct: 747 GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYV 806
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VDLLGR G++ A + I+EMP+ D++IW LL +C H + E AA L +LEP
Sbjct: 807 CVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPE 866
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
DS +V +SNIY +S + RK MK V+K PG SWIE++N VH F +G K HP
Sbjct: 867 DSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPL 926
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I++ + L + +GYV ++ L++ E+ K+ + HSEKLA+ F +++ G+
Sbjct: 927 TNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGN-- 984
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+MKN+R+C DCHN++K S + + I+VRD++RFHHF +CSC D+W
Sbjct: 985 --NIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 187/366 (51%), Gaps = 26/366 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+ +V N L+ +Y++ L A +F M R+ VS+ +LISG Q G ++ LF +
Sbjct: 295 ETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQ 354
Query: 101 QYFF-PNEFSLASVLISC---DYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ P+ ++AS+L +C LH G +H+ A+K + A + + +L+++YSK CAD
Sbjct: 355 RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK-CADV 413
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A K F E N++ WN M+ A+ ++ N ++ +FRQ+Q EGM
Sbjct: 414 ETAHKFFLXTETENIVLWNVMLVAY-------------GQLDNLSDSFEIFRQMQMEGMI 460
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T+ +L+ C L +H+ + K GF+ + + + LI YA+ G ++L+ ++
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
++ D+VSW +++ Y H EALQLF M +Q D+ F S +SAC+ +
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++G ++ H+ G L ++ L R GRI EA L E + +++ W+ L+
Sbjct: 581 RQGQQI-HAQSYAAGFGADLSINNALISLYARCGRIQEA-YLAFEKIGDKNNISWNSLVS 638
Query: 391 SCRKHG 396
+ G
Sbjct: 639 GLAQSG 644
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 29/395 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
Q Y L C G++ + M+LH + + F EP + + L++ Y + G A +
Sbjct: 59 QNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEP---LLIDSLVDNYFRHGDQHGAVKV 115
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC-----D 118
FDE R+V SW +I + + + F LF +L + PN ++ A VL +C
Sbjct: 116 FDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIA 175
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
+ + K VH+ + D+ VAN LI++YSK+ + A KVF + +++++W +MI+
Sbjct: 176 FNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISG 235
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
LE +AI LF M E + P S VL A +
Sbjct: 236 LSQNGLEEEAILLFCDMHASE-------------IFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H L+ K+GF +T + N L+ Y+R + ++++F M D VS+NS++ G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 298 AKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+ AL+LF+ M ++PD T SLLSAC+ G + +G ++ HS G+ +
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQL-HSHAIKAGMSADIILEG 401
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++DL + + A K E + V+W+V+L
Sbjct: 402 SLLDLYSKCADVETAHKFFLXTETE-NIVLWNVML 435
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 316/558 (56%), Gaps = 29/558 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
+ N L++MY K G + ++R + +MP+R+VV+W ALI GYA+ + ++ F ++ ++
Sbjct: 398 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 457
Query: 102 YFFPNEFSLASVLISC----DYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD-- 154
N ++ SVL +C D L GK +HA + ++ +V N+LI MY+K C D
Sbjct: 458 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK-CGDLS 516
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ +F ++ RN+I+WN+M+AA A + EE L L +++ G++
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAAN-------------AHHGHGEEVLKLVSKMRSFGVSL 563
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D +FS L A A L +H L K GFE D+ I NA Y++CG I ++
Sbjct: 564 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
L SWN ++ A HG +E F M ++P TFVSLL+ACSH GLV
Sbjct: 624 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 683
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + + + G+ P ++H C++DLLGR GR+ EAE I +MPM+P+ ++W LL S
Sbjct: 684 KGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 743
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ HG AA L +LEP D +V SN++ +G + +RK+M ++K
Sbjct: 744 CKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 803
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
SW++++++V F G + HPQ I+ KLE++ +K GYV +TS AL D +EE KE
Sbjct: 804 ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKE 863
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L++HSE+LAL +A+M+ E S +RI KN+RIC DCH+ K S ++G+ IV+RD
Sbjct: 864 HNLWNHSERLALAYALMST----PEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRD 919
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHF+ +CSC DYW
Sbjct: 920 QYRFHHFERGLCSCKDYW 937
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 204/398 (51%), Gaps = 27/398 (6%)
Query: 4 STQIYATLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
S+ + A+L AC G++ ++ +Q+H + + D++V+ ++++Y +G + +R
Sbjct: 57 SSFVIASLVTACGRSGSMFREGVQVHGFVAKS--GLLSDVYVSTAILHLYGVYGLVSCSR 114
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH 121
+F+EMP RNVVSWT+L+ GY+ G EE ++ + + NE S++ V+ SC L
Sbjct: 115 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 174
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIA 176
G+ + +K L++ + V N+LI+M S D A +F+ M R+ ISWNS+ A
Sbjct: 175 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 234
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A +A+ + EE+ +F ++R + T S +L + ++
Sbjct: 235 A-------------YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H L+ K GF+ + N L+ YA G + VF +M DL+SWNS++ ++ G
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 297 QAKEALQLFSNMNVQPDS---ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
++ +AL L +M S TF S L+AC ++G ++ H ++ G+
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIG 400
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+V + G++G + E+ +++ +MP D V W+ L+G
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGG 437
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 52/412 (12%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG---NAEECFRLFCSLLQYFFPNE 107
MY KFG + ARHLFD MP RN VSW ++SG + G E FR C L P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL--GIKPSS 58
Query: 108 FSLASVLISCD-----YLHGKLVHALALKFSLDAHVYVANALINMYSK----SCADEAWK 158
F +AS++ +C + G VH K L + VYV+ A++++Y SC+ K
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR---K 115
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
VFE M RNV+SW S++ + + EE + +++ ++ EG+ + +
Sbjct: 116 VFEEMPDRNVVSWTSLMVGY-------------SDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
S+V+ +C L E + + K G E + N+LI G++ + +FD+M+
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 222
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNK 335
D +SWNSI AYA +G +E+ ++FS M + +S T +LLS H + G
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 336 VFHSMLENHGVVPQL--DHYACMVDLLGRV----GRILEAEKLIREMPMEPDSVIWSVLL 389
+ HG+V ++ D C+ + L R+ GR +EA + ++MP + D + W+ L+
Sbjct: 283 I-------HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM 334
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY--CLSGS-FNKARLI 438
S G R + + G S+ +V ++ C + F K R++
Sbjct: 335 ASFVNDG--RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 25/365 (6%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V N LI+M G +D A ++FD+M +R+ +SW ++ + YAQ+G+ EE FR+F SL++
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF-SLMR 253
Query: 102 YFFPNEFS-----LASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
F S L SVL D+ G+ +H L +K D+ V V N L+ MY+ +
Sbjct: 254 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA VF+ M +++ISWNS++A+F A+ L M + G +
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-------------SGKSV 360
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
++ TF+ L AC +H L+ G + +I NAL+ Y + G +S S++V
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA---TFVSLLSACSHAGLVQ 331
+M D+V+WN+++ YA +AL F M V+ S+ T VS+LSAC G +
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
E K H+ + + G ++ + + G + ++ L + + + W+ +L +
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 539
Query: 392 CRKHG 396
HG
Sbjct: 540 NAHHG 544
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 39/328 (11%)
Query: 10 TLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ AC L G++ ++ LH ++++ D V N LI MYAK G L ++ LF+ +
Sbjct: 468 SVLSACLLPGDLLERGKPLHAYIVS--AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 525
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLF-------CSLLQYFFPNEFSLASVLISCDYLH 121
RN+++W A+++ A HG+ EE +L SL Q+ F S A+ L +
Sbjct: 526 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE--E 583
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H LA+K + ++ NA +MYSK C + E K+ R++ SWN +I+A
Sbjct: 584 GQQLHGLAVKLGFEHDSFIFNAAADMYSK-CGEIGEVVKMLPPSVNRSLPSWNILISA-- 640
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASA 237
+ EE F ++ G+ P TF +L AC+ GLV + A
Sbjct: 641 -----------LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDK--GLA 687
Query: 238 VHSLIAK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYAL 294
+ +IA+ +G E +I R G ++ ++ KM +DLV W S+L + +
Sbjct: 688 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLASCKI 746
Query: 295 HG---QAKEALQLFSNMNVQPDSATFVS 319
HG + ++A + S + + DS +S
Sbjct: 747 HGNLDRGRKAAENLSKLEPEDDSVYVLS 774
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 316/558 (56%), Gaps = 29/558 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
+ N L++MY K G + ++R + +MP+R+VV+W ALI GYA+ + ++ F ++ ++
Sbjct: 488 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 547
Query: 102 YFFPNEFSLASVLISC----DYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD-- 154
N ++ SVL +C D L GK +HA + ++ +V N+LI MY+K C D
Sbjct: 548 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK-CGDLS 606
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ +F ++ RN+I+WN+M+AA A + EE L L +++ G++
Sbjct: 607 SSQDLFNGLDNRNIITWNAMLAAN-------------AHHGHGEEVLKLVSKMRSFGVSL 653
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D +FS L A A L +H L K GFE D+ I NA Y++CG I ++
Sbjct: 654 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 713
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
L SWN ++ A HG +E F M ++P TFVSLL+ACSH GLV
Sbjct: 714 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 773
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + + + G+ P ++H C++DLLGR GR+ EAE I +MPM+P+ ++W LL S
Sbjct: 774 KGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 833
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ HG AA L +LEP D +V SN++ +G + +RK+M ++K
Sbjct: 834 CKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 893
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
SW++++++V F G + HPQ I+ KLE++ +K GYV +TS AL D +EE KE
Sbjct: 894 ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKE 953
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L++HSE+LAL +A+M+ E S +RI KN+RIC DCH+ K S ++G+ IV+RD
Sbjct: 954 HNLWNHSERLALAYALMS----TPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRD 1009
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHF+ +CSC DYW
Sbjct: 1010 QYRFHHFERGLCSCKDYW 1027
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 193/393 (49%), Gaps = 42/393 (10%)
Query: 4 STQIYATLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
S+ + A+L AC G++ ++ +Q+H + + D++V+ ++++Y +G + +R
Sbjct: 172 SSFVIASLVTACGRSGSMFREGVQVHGFVAKS--GLLSDVYVSTAILHLYGVYGLVSCSR 229
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG 122
+F+EMP RNVVSWT+L+ GY+ G EE ++ D G
Sbjct: 230 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK--------------------DESLG 269
Query: 123 KLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ + +K L++ + V N+LI+M S D A +F+ M R+ ISWNS+ AA+
Sbjct: 270 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY--- 326
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ + EE+ +F ++R + T S +L + ++ +H L
Sbjct: 327 ----------AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 376
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GF+ + N L+ YA G + VF +M DL+SWNS++ ++ G++ +A
Sbjct: 377 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 436
Query: 302 LQLFSNMNVQPDS---ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L L +M S TF S L+AC ++G ++ H ++ G+ +V
Sbjct: 437 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVS 495
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ G++G + E+ +++ +MP D V W+ L+G
Sbjct: 496 MYGKIGEMSESRRVLLQMPRR-DVVAWNALIGG 527
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 25/365 (6%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V N LI+M G +D A ++FD+M +R+ +SW ++ + YAQ+G+ EE FR+F SL++
Sbjct: 285 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF-SLMR 343
Query: 102 YFFPNEFS-----LASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
F S L SVL D+ G+ +H L +K D+ V V N L+ MY+ +
Sbjct: 344 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 403
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA VF+ M +++ISWNS++A+F A+ L M + G +
Sbjct: 404 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS-------------GKSV 450
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
++ TF+ L AC +H L+ G + +I NAL+ Y + G +S S++V
Sbjct: 451 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 510
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA---TFVSLLSACSHAGLVQ 331
+M D+V+WN+++ YA +AL F M V+ S+ T VS+LSAC G +
Sbjct: 511 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 570
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
E K H+ + + G ++ + + G + ++ L + + + W+ +L +
Sbjct: 571 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 629
Query: 392 CRKHG 396
HG
Sbjct: 630 NAHHG 634
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 39/328 (11%)
Query: 10 TLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ AC L G++ ++ LH ++++ D V N LI MYAK G L ++ LF+ +
Sbjct: 558 SVLSACLLPGDLLERGKPLHAYIVS--AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 615
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLF-------CSLLQYFFPNEFSLASVLISCDYLH 121
RN+++W A+++ A HG+ EE +L SL Q+ F S A+ L +
Sbjct: 616 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE--E 673
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H LA+K + ++ NA +MYSK C + E K+ R++ SWN +I+A
Sbjct: 674 GQQLHGLAVKLGFEHDSFIFNAAADMYSK-CGEIGEVVKMLPPSVNRSLPSWNILISA-- 730
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASA 237
+ EE F ++ G+ P TF +L AC+ GLV + A
Sbjct: 731 -----------LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDK--GLA 777
Query: 238 VHSLIAK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYAL 294
+ +IA+ +G E +I R G ++ ++ KM +DLV W S+L + +
Sbjct: 778 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLASCKI 836
Query: 295 HG---QAKEALQLFSNMNVQPDSATFVS 319
HG + ++A + S + + DS +S
Sbjct: 837 HGNLDRGRKAAENLSKLEPEDDSVYVLS 864
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 39/277 (14%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ VHAL +K + V N LINMY+K A +F+ M RN +SWN+M++
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE-RHASAVH 239
L + +E F KM + G+ P + ++ AC + R VH
Sbjct: 151 VGLYLEGMEFFRKMCD-------------LGIKPSSFVIASLVTACGRSGSMFREGVQVH 197
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+AK G D ++ A++H Y G +S S++VF++M ++VSW S++ Y+ G+ +
Sbjct: 198 GFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 257
Query: 300 EALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
E + ++ + ++ G ++ ++++ G+ +L ++ +
Sbjct: 258 EVIDIYKDESL----------------------GRQIIGQVVKS-GLESKLAVENSLISM 294
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
LG +G + A + +M E D++ W+ + + ++G
Sbjct: 295 LGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNG 330
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ E AVH+L K + N LI+ Y + G + ++ +FD M + VSWN++
Sbjct: 85 ITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTM 144
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG-LVQEGNKVFHSMLENH 344
+ G E ++ F M ++P S SL++AC +G + +EG +V H +
Sbjct: 145 MSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV-HGFVAKS 203
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
G++ + ++ L G G + + K+ EMP + + V W+ L+ GE
Sbjct: 204 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYSDKGE 255
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/686 (32%), Positives = 345/686 (50%), Gaps = 107/686 (15%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T + AC G + A Q+H ++ D+ + N LI+MY+K G L+ AR +
Sbjct: 234 TATIVRVLQACGKMGALNAAKQIHGYVFRF--GLDSDVSLCNPLISMYSKNGKLELARRV 291
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLF----------------CSLLQYFF---- 104
FD M RN SW ++IS YA G + + LF C L +F
Sbjct: 292 FDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYK 351
Query: 105 ----------------PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANAL 144
PN S+ SVL + L GK H L+ D VYV +L
Sbjct: 352 EEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 411
Query: 145 INMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFR------------------------ 179
I+MY K+ A VF+NM+ RN+ +WNS+++ +
Sbjct: 412 IDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDL 471
Query: 180 -------------ACKLEAQA--------------------IELFAKMKNEEEALFLFRQ 206
C EA A I ++ N ++L F Q
Sbjct: 472 VTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQ 531
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+Q+EG+ P+ + + +L+ACA L + +H L + GF +D +A ALI Y++ S
Sbjct: 532 MQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSS 591
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ + +VF ++ L SWN ++ +A+ G KEA+ +F+ M V PD+ TF +LLSA
Sbjct: 592 LKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSA 651
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C ++GL+ EG K F SM+ ++ +VP+L+HY CMVDLLGR G + EA LI MP++PD+
Sbjct: 652 CKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDAT 711
Query: 384 IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
IW LLGSCR H + AE AA L +LEP +S ++ M N+Y + + +R+ M
Sbjct: 712 IWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMG 771
Query: 444 GSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH 503
+ VR SWI+I RVH F+S K HP I+ +L +L+ ++K +GYVP+ +
Sbjct: 772 AAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQ 831
Query: 504 DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
+++E K++ L H+EKLA+ + ++ + IR++KN RIC DCH+ K S +
Sbjct: 832 NMDEVEKQKILLSHTEKLAITYGLIKM----KAGEPIRVIKNTRICSDCHSAAKYISLVK 887
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
+E+ +RD RFHHF++ CSCND+W
Sbjct: 888 ARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 150/350 (42%), Gaps = 29/350 (8%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H MI P + +LI+ Y FG A +F RN + W + + +
Sbjct: 52 MHAQMIK-LPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSS 110
Query: 87 GNAE----ECFRLFCSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHV 138
+ E F+ F +S+A L +C D G +H +K D V
Sbjct: 111 AGSLHIVLEVFKELHGKGVVFDSEVYSVA--LKTCTRVMDIWLGMEIHGCLIKRGFDLDV 168
Query: 139 YVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
Y+ AL+N Y + ++A +VF M + WN +AI L + +
Sbjct: 169 YLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWN-------------EAIILNLQSEKL 215
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
++ + LFR++Q + + T VL+AC + A +H + ++G + D + N L
Sbjct: 216 QKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 275
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
I Y++ G + L+++VFD M + SWNS++ +YA G +A LF + +++PD
Sbjct: 276 ISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDI 335
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
T+ LLS G +E + M + G P ++ + +G
Sbjct: 336 VTWNCLLSGHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVLQAISELG 384
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 330/557 (59%), Gaps = 29/557 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V N LI++YAK G + AR +F+ M ++ VSW ++ISGY Q G+ E +LF ++
Sbjct: 344 VKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 104 FPNEFSLASVLIS-----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EA 156
+ +LIS D GK +H+ +K + + V+NALI+MY+K C + ++
Sbjct: 404 EQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAK-CGEVGDS 462
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
K+F +M + ++WN++I+A C + + L + Q+++ + PD
Sbjct: 463 LKIFNSMGTLDTVTWNTVISA---C----------VRFGDFATGLQVTTQMRKNKVVPDM 509
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
TF + L CA L +R +H + ++G+E + I NALI Y++CG + S +VF++
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFER 569
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M+ D+V+W ++ AY ++G+ ++AL+ F +M + PDS F++L+ ACSH+GLV++G
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKG 629
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
F M ++ + P ++HYAC+VDLL R +I +AE+ I+ MP+EPD+ IW+ +L +CR
Sbjct: 630 LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACR 689
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
G+ AE + ++ +L P D + SN Y ++K LIRK ++ ++K PG
Sbjct: 690 TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGY 749
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWIEI +VH F SG PQ EAI K LE L + GY+P++ ++EEE ++ +
Sbjct: 750 SWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRR 809
Query: 514 LY-HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
L HSE+LA+ F ++N + +++MKN+R+C DCH KL S ++G+EI+VRD+
Sbjct: 810 LICGHSERLAIAFGLLNT----EPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDA 865
Query: 573 NRFHHFKDRICSCNDYW 589
NRFH FKD ICSC D W
Sbjct: 866 NRFHLFKDGICSCKDRW 882
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 200/380 (52%), Gaps = 25/380 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
DL+V N L++MY++ G L AR +FDEMP R++VSW +LISGY+ HG EE ++ L
Sbjct: 139 SDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 100 LQ-YFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ P+ F+++SVL + L G+ +H LK +++ V N L+ MY K S
Sbjct: 199 RNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRP 258
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A +VF+ M R+ +++N+MI + ++ +++++F E L F+
Sbjct: 259 TDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFL------ENLDQFK-------- 304
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T + VL AC L A +++ + + GF ++ + N LI YA+CG + ++ V
Sbjct: 305 PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDV 364
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLV 330
F+ M D VSWNSI+ Y G EA++LF M + Q D T++ L+S + +
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADL 424
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ G K HS G+ L ++D+ + G + ++ K+ M D+V W+ ++
Sbjct: 425 KFG-KGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG-TLDTVTWNTVIS 482
Query: 391 SCRKHGETRLAELAATKLKQ 410
+C + G+ T++++
Sbjct: 483 ACVRFGDFATGLQVTTQMRK 502
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 196/398 (49%), Gaps = 26/398 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A + A + N+ + ++H +I+ + D F + LI+ Y+ F + +F +
Sbjct: 8 AFISRALSSSSNLNELRRIHALVIS-LGLDGSDFF-SGKLIDKYSHFRAPASSLSVFRRV 65
Query: 69 -PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
P +NV W ++I ++++G + + L + P++++ SV+ +C D G
Sbjct: 66 SPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
LV+ L+ ++ +YV NAL++MYS+ A +VF+ M R+++SWNS+I+
Sbjct: 126 DLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISG---- 181
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ EEAL ++ +L+ + PD T S VL A A L+ + +H
Sbjct: 182 ---------YSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGF 232
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G +V+ N L+ Y + + +++VFD+M D V++N+++ Y +E+
Sbjct: 233 TLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEES 292
Query: 302 LQLF-SNMN-VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+++F N++ +PD T S+L AC H + +++ ML G V + ++D+
Sbjct: 293 VKMFLENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLR-AGFVLESTVKNILIDV 351
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ G ++ A + M + D+V W+ ++ + G+
Sbjct: 352 YAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGD 388
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+L + N LI MY+K G L+ + +F+ M +R+VV+WT +I Y +G E+ F +
Sbjct: 542 SELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDM 601
Query: 100 LQY-FFPNEFSLASVLISCDYLHGKLVH 126
+ P+ +++ +C H LV
Sbjct: 602 EKSGIVPDSVVFIALIYACS--HSGLVE 627
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/604 (36%), Positives = 333/604 (55%), Gaps = 41/604 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA--RHLFDEMPKRNVVSWT 77
N+ Q Q+H H++ + Q ++ LI K G D R + + + RN WT
Sbjct: 62 NLNQIKQIHGHVLRKGLD--QSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWT 119
Query: 78 ALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKF 132
A+I GY G +E ++ C + P F+ +++L +C D G+ HA +
Sbjct: 120 AVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRL 179
Query: 133 SLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSMIAAF-RACKLEAQA-- 187
VYV N +I+MY K C A KVF+ M R+VISW +IAA+ R +E+ A
Sbjct: 180 RGFCFVYVGNTMIDMYVK-CGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADL 238
Query: 188 ---------------IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+ FA+ +EAL F ++++ G+ D T + + ACA L
Sbjct: 239 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGAS 298
Query: 233 RHASAVHSLIAKYGFE--DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
++A + K G+ D VI +ALI Y++CG++ + VF M ++ S++S++
Sbjct: 299 KYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMIL 358
Query: 291 AYALHGQAKEALQLFSNMNVQ----PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
A HG+A+EAL LF M Q P++ TFV L+ACSH+GLV +G +VF SM + GV
Sbjct: 359 GLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGV 418
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
P DHY CMVDLLGR GR+ EA +LI+ M +EP +W LLG+CR H +AE+AA
Sbjct: 419 EPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAE 478
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN-RVHEF 465
L +LEP ++ +SN+Y +G + +RK +K ++K P +SW+ +N ++H+F
Sbjct: 479 HLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKF 538
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
G HP + I KLEEL+ +L +GY P+ S +D+ + K L H+EKLAL F
Sbjct: 539 FPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAF 598
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
+++ I+IMKN+R+C DCH FM+LAS++ G+ I++RD+ RFHHF+ CSC
Sbjct: 599 SLLTT----NRDYTIKIMKNLRMCQDCHMFMRLASEVTGRVIIMRDNMRFHHFRSGACSC 654
Query: 586 NDYW 589
D+W
Sbjct: 655 GDFW 658
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/593 (35%), Positives = 343/593 (57%), Gaps = 33/593 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ AC ++ A ++ +M+ F E V N LI++YAK G + AR +F+
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST---VRNILIDVYAKCGDMITARDVFNS 367
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS-----CDYLHG 122
M ++ VSW ++ISGY Q G+ E +LF ++ + +LIS D G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K +H+ +K + + V+NALI+MY+K C + ++ K+F +M + ++WN++I+A
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAK-CGEVGDSLKIFSSMGTGDTVTWNTVISA--- 483
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
C + + L + Q+++ + PD TF + L CA L +R +H
Sbjct: 484 C----------VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ ++G+E + I NALI Y++CG + S +VF++M+ D+V+W ++ AY ++G+ ++
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+ F++M + PDS F++++ ACSH+GLV EG F M ++ + P ++HYAC+V
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLL R +I +AE+ I+ MP++PD+ IW+ +L +CR G+ AE + ++ +L P D
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+ SN Y ++K LIRK +K + K PG SWIE+ VH F+SG PQ EA
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY-HHSEKLALVFAIMNQGSLCRE 536
I+K LE L + GY+P+ ++EEE ++ +L HSE+LA+ F ++N
Sbjct: 774 IYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNT----EP 829
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +++MKN+R+C DCH KL S ++G+EI+VRD+NRFH FKD CSC D W
Sbjct: 830 GTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 217/414 (52%), Gaps = 27/414 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ ACA + + ++E +++ DLFV N L++MY++ G L AR +FDE
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDM--GFESDLFVGNALVDMYSRMGLLTRARQVFDE 166
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYL----HG 122
MP R++VSW +LISGY+ HG EE ++ L + P+ F+++SVL + L G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H ALK +++ V V N L+ MY K +A +VF+ M+ R+ +S+N+MI +
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ +++ +F E L F+ PD T S VL+AC L A +++
Sbjct: 287 EMVEESVRMFL------ENLDQFK--------PDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GF ++ + N LI YA+CG + ++ VF+ M D VSWNSI+ Y G EA
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 302 LQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M + Q D T++ L+S + ++ G K HS G+ L ++D
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALID 451
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
+ + G + ++ K+ M D+V W+ ++ +C + G+ T++++ E
Sbjct: 452 MYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 139/270 (51%), Gaps = 20/270 (7%)
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENME-FRNVISWNSMIAAFRACK 182
+HAL + LD+ + + LI+ YS + VF + +NV WNS+I AF
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
L +A+E + K++ + ++PD TF V+KACAGL V+ I
Sbjct: 86 LFPEALEFYGKLRESK-------------VSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
GFE D + NAL+ Y+R G ++ ++QVFD+M DLVSWNS++ Y+ HG +EAL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 303 QLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+++ N + PDS T S+L A + +V++G + H GV + +V +
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL-HGFALKSGVNSVVVVNNGLVAM 251
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ R +A ++ EM + DSV ++ ++
Sbjct: 252 YLKFRRPTDARRVFDEMDVR-DSVSYNTMI 280
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 180/364 (49%), Gaps = 24/364 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
F + LI+ Y+ F + +F + P +NV W ++I ++++G E + L +
Sbjct: 40 FFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE 99
Query: 102 Y-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
P++++ SV+ +C D G LV+ L ++ ++V NAL++MYS+
Sbjct: 100 SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A +VF+ M R+++SWNS+I+ + + +A+E++ ++KN + PD
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN-------------SWIVPD 206
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T S VL A L+ + +H K G V+ N L+ Y + + +++VFD
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLF-SNMN-VQPDSATFVSLLSACSHAGLVQEG 333
+M D VS+N+++ Y +E++++F N++ +PD T S+L AC H +
Sbjct: 267 EMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLA 326
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+++ ML+ G V + ++D+ + G ++ A + M + D+V W+ ++
Sbjct: 327 KYIYNYMLK-AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYI 384
Query: 394 KHGE 397
+ G+
Sbjct: 385 QSGD 388
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/596 (35%), Positives = 329/596 (55%), Gaps = 35/596 (5%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARH 63
Q Y T+ + C K+ ++H H I P +++ LI Y K L DARH
Sbjct: 27 QDYNTVLNECVSKRAFKEGQRVHAHTIKTHYLPC----VYLWTRLIVFYTKCDSLGDARH 82
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHG 122
+ +EMP+RNVVSWTA+IS Y+Q G A + + +L+ NEF+ A++ G
Sbjct: 83 VLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPYFMYRFLG 142
Query: 123 ----KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAA 177
+ +H+L +K + AHVYV ++L++MY+K EA +FE + R+V+S ++I+
Sbjct: 143 FCLREAIHSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 202
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L+ E L LF +LQREGM ++ T++ VL A +GL H
Sbjct: 203 YAQLDLD--------------EELELFLRLQREGMXSNYVTYTSVLTALSGLAALDHGKQ 248
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH+ + ++ N+LI Y++CG+++ ++++FD M ++SWN++L Y+ HG+
Sbjct: 249 VHNHLLCSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMRERTVISWNAMLVGYSKHGE 308
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH-GVVPQLDH 352
+E L+LF+ M V+PDS T +++LS CSH G +G +F+ M V P
Sbjct: 309 RREVLELFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGKISVQPDTKR 368
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y C+VDLLGR GR+ EA + I+++P EP + I LLG+C H + E +L + E
Sbjct: 369 YGCVVDLLGRAGRVEEAFEFIKKIPFEPSAAICGCLLGACSVHSNLGIGEFVGHRLLEFE 428
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
P ++ +V +SN+Y +G + +R M V K PG S IE++ + F H
Sbjct: 429 PENAGNYVILSNLYASAGRWEDVTSLRNLMLKKAVTKEPGRSLIEVDQVLQTFHPSDCSH 488
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P+RE + K +EL+ + K GY P+ S LHD++EE KE+ L HSEKLAL F ++
Sbjct: 489 PRREEVSAKXQELLVRFKEAGYFPDLSCVLHDVDEEQKEKILLSHSEKLALSFGLIATP- 547
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
E +I ++KN+RICVDCHNF K S + +E+ +RD N FH CSC DY
Sbjct: 548 ---ESVLICVIKNLRICVDCHNFAKYISKIYSREVSLRDKNWFHGIVGEKCSCGDY 600
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 82/194 (42%), Gaps = 19/194 (9%)
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
Q+ G+ + ++ VL C + VH+ K + + LI Y +C
Sbjct: 16 QMTLXGLDMNLQDYNTVLNECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCD 75
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSL-- 320
S+ ++ V ++M ++VSW +++ AY+ G A +AL + + + + TF ++
Sbjct: 76 SLGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPY 135
Query: 321 -----LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
L C + HS++ + + ++D+ + G+I EA +
Sbjct: 136 FMYRFLGFCLREAI--------HSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFEC 187
Query: 376 MPMEPDSVIWSVLL 389
+P E D V + ++
Sbjct: 188 LP-ERDVVSCTAII 200
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/597 (37%), Positives = 348/597 (58%), Gaps = 36/597 (6%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
I Q + +H +I N QD F+ L+ +K +D A +F NV +TALI
Sbjct: 62 INQVLPIHAQLIRN--GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 119
Query: 81 SGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLD 135
G+ GN E +L+ +L + P+ + +AS+L +C G+ VH+ ALK
Sbjct: 120 DGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFS 179
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
++ V ++ +Y K C + +A +VFE M +V++ MI+++ L +A +F++
Sbjct: 180 SNRLVRLRIMELYGK-CGELGDARRVFEEMP-EDVVASTVMISSYSDQGLVEEAGAVFSR 237
Query: 194 MK----------------NEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
++ NEE AL FR +Q E + P+ T VL AC+ L
Sbjct: 238 VRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 297
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VHS + K+ E + + NALI+ Y+RCGSI ++ VFD+M D++++N+++ +++
Sbjct: 298 RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMN 357
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G++++A++LF M ++P + TFV +L+ACSH GLV G ++FHSM ++ V PQ++H
Sbjct: 358 GKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEH 417
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y CMVDLLGRVGR+ EA LIR M M PD ++ LL +C+ H L E A +L+
Sbjct: 418 YGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRG 477
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
DS +V +S++Y SG + +A +R +MK + ++K PG S IE+ N +HEF G RH
Sbjct: 478 QADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRH 537
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
PQ+E I++KLEEL L+ GY PE + L DIE+ KE L HSE+LA+ + +++
Sbjct: 538 PQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEP 597
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++IR+MKN+R+C DCH+ +KL + + ++IVVRD NRFH+F++ CSC DYW
Sbjct: 598 C----TMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 44/268 (16%)
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+ Q I L + ++ + L + QL R G + D +L++C
Sbjct: 49 QKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSC----------------- 91
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
++C +I + ++F ++ + +++ + G EA+Q
Sbjct: 92 ------------------SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQ 133
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
L+S M ++ PD+ S+L AC ++EG +V HS G +++L
Sbjct: 134 LYSRMLHESILPDNYLMASILKACGSQLALREGREV-HSRALKLGFSSNRLVRLRIMELY 192
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
G+ G + +A ++ EMP D V +V++ S G L E A ++ D++ +
Sbjct: 193 GKCGELGDARRVFEEMP--EDVVASTVMISSYSDQG---LVEEAGAVFSRVRRKDTVCWT 247
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVR 448
M + + + N+A + M+G VR
Sbjct: 248 AMIDGFVRNEETNRALEAFRGMQGENVR 275
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 308/554 (55%), Gaps = 55/554 (9%)
Query: 41 DLFVTNHLINMYAKF--GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
DLFV L+ MYAK G + AR FDE P+R+V +++ Y G E ++F
Sbjct: 82 DLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVF-- 139
Query: 99 LLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWK 158
D + G+ + + ++ H Y + M A +
Sbjct: 140 -------------------DGMSGRDL----VSWNTMIHGYAVRGDVGM--------ARE 168
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F+ R+ SW+SMI+A+ AK + +EAL L+R+++ G+APD +
Sbjct: 169 IFDGTRDRDAFSWSSMISAY-------------AKGRCSKEALELWREMRVAGVAPDCIS 215
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
VL AC+ + + VH + E D + AL+ YA+CG I S +VF M
Sbjct: 216 MVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMP 275
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D+++W+S++ A HG +AL LFS M +QP+ TF+ +L AC+H GLV +G K
Sbjct: 276 VKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKK 335
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F SM + HGVVP+++HY CMVDLLGR G + EA +LIR M +PD +IW LLG+CR H
Sbjct: 336 YFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIH 395
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
+AE A KLK L+P +V +SNIY + S+ +RK ++ +++ PG S
Sbjct: 396 KNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSS 455
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
IE EN VHEF SG + HP+ E I+K LEE++ +L+ GY P TSL L DI+E+ K+ L
Sbjct: 456 IEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQSKKRALA 515
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HSEKLA+ F ++ + RS +RI KN+R C DCH+ +KL S ++++VRD NRF
Sbjct: 516 EHSEKLAIAFGLL----VTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIVRDRNRF 571
Query: 576 HHFKDRICSCNDYW 589
HHF + CSC DYW
Sbjct: 572 HHFSEGQCSCKDYW 585
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ AC+ G + ++H + +N D+ + L++MYAK G ++++ +F MP
Sbjct: 218 SVLSACSAMGALAIGAEVHRFVESN--RVEVDMKLGTALVDMYAKCGDIENSLKVFHAMP 275
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHAL 128
++V++W+++I G A HG + LF ++ Q PNE + VLI+C H LV+
Sbjct: 276 VKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIAC--THVGLVNDG 333
Query: 129 ALKFS--LDAHVYVA-----NALINMYSKSC-ADEAWKVFENMEFR-NVISWNSMIAAFR 179
FS D H V ++++ ++ +EA ++ +M F+ + I W +++ A R
Sbjct: 334 KKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACR 393
Query: 180 ACKLEAQAIELFAKMK 195
K A E AK+K
Sbjct: 394 IHKNVEIAEEAMAKLK 409
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 73/236 (30%)
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR--CGSISLS--------------- 270
GL HA A+ S A D + AL+ YA+ G I+L+
Sbjct: 64 GLGASLHARALRSGFAAA----DLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLC 119
Query: 271 ----------------KQVFDKMTYHDLVSWNSILKAYALHGQ----------------- 297
++VFD M+ DLVSWN+++ YA+ G
Sbjct: 120 NVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAF 179
Query: 298 --------------AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+KEAL+L+ M V PD + VS+LSACS G + G +V H
Sbjct: 180 SWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEV-HRF 238
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+E++ V + +VD+ + G I + K+ MP++ D + WS ++ HG
Sbjct: 239 VESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVK-DVLTWSSMIIGLANHG 293
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/564 (37%), Positives = 325/564 (57%), Gaps = 18/564 (3%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
QD FV L+ + + + A +F NV +TALI G + L+ +
Sbjct: 62 QDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQM 121
Query: 100 LQY-FFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
+ P+ +++ SVL +C G+ VH+ LK L ++ + LI +Y K A
Sbjct: 122 INSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAF 181
Query: 154 DEAWKVFENMEFRNVISWNSMIAAF-----RACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
++A +VF+ M R+V++ MI + + I+ + AL +FR +Q
Sbjct: 182 EDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQ 241
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
RE + P+ T VL AC+ L + V S + K+ E + + ALI+ Y+RCG I
Sbjct: 242 REDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDID 301
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACS 325
+++VF++M +++++NS++ +ALHG++ EA++LF + Q P S TFV +L+ACS
Sbjct: 302 EAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACS 361
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H GL + G ++FHSM +++G+ PQ++HY CMVDLLGR+GR+ EA IR M + PD V+
Sbjct: 362 HGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVML 421
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LL +C+ HG LAE A L + DS ++ +SN Y SG + +A +R M+
Sbjct: 422 GALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREE 481
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
+ K PG S IE+ N +HEF G RHPQ+E I+KKLEEL L+ GY P T + LHDI
Sbjct: 482 GIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDI 541
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
E+ KE L HSE+LA+ + +++ L + +R++KN+R+C DCH +KL S++ +
Sbjct: 542 EKSEKEWALAIHSERLAICYGLISTKPL----TTLRVVKNLRVCNDCHLTIKLISNITRR 597
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
+IVVRD NRFHHF++ +CSC DYW
Sbjct: 598 KIVVRDRNRFHHFENGVCSCGDYW 621
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/596 (35%), Positives = 336/596 (56%), Gaps = 30/596 (5%)
Query: 20 NIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
++ + +Q+H ++ +N P+ + L YA G + + LF + ++ +TA
Sbjct: 39 SVDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 98
Query: 79 LISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH 137
I+ + +G ++ F L+ LL PNEF+ +S+L SC GKL+H LKF L
Sbjct: 99 AINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKSGKLIHTHVLKFGLGLD 158
Query: 138 VYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF--------------RACK 182
YVA L+++Y+K A KVF+ M R+++S +MI + R C+
Sbjct: 159 PYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCE 218
Query: 183 LEAQA----IELFAKMKNEEEALFLFRQLQREGMA-PDWCTFSIVLKACAGLVTERHASA 237
+ + I+ +++ +AL LF++L +G PD T L AC+ +
Sbjct: 219 RDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRW 278
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + + + ALI Y++CGS+ + VF+ D+V+WN+++ YA+HG
Sbjct: 279 IHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGY 338
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+++AL+LF M +QP TF+ L AC+HAGLV EG ++F SM + +G+ P+++HY
Sbjct: 339 SQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHY 398
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C+V LLGR G++ A ++I+ M ME DSV+WS +LGSC+ HGE L + A L
Sbjct: 399 GCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNI 458
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+S +V +SNIY L G + +R MK + K PG+S IEI+N+VHEF +G + H
Sbjct: 459 SNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHL 518
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ + I+ L ++ ++K GYVP T+ LHD+EE KE L HSE+LA+ + +++
Sbjct: 519 KSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLIS---- 574
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ S ++I KN+R+C DCH KL S + G++IV+RD NRFHHF D CSC+D+W
Sbjct: 575 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/564 (38%), Positives = 321/564 (56%), Gaps = 35/564 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV +MY+K G +AR++FDEMP RN+ +W A +S Q G + F L
Sbjct: 143 DVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFL 202
Query: 101 QYFF-PNEFSLASVLISC-DYLH---GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
PN + + L +C D + G+ +H ++ V V N LI+ Y K C D
Sbjct: 203 CVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGK-CGDI 261
Query: 155 -EAWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+ VF + RNV+SW S++AA + EE A +F Q ++E
Sbjct: 262 VSSELVFSRIGSGRRNVVSWCSLLAAL-------------VQNHEEERACMVFLQARKEV 308
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
D+ S VL ACA L +VH+L K E++ + +AL+ Y +CGSI ++
Sbjct: 309 EPTDF-MISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAE 367
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN-----VQPDSATFVSLLSACSH 326
QVF +M +LV+WN+++ YA G AL LF M + T VS+LSACS
Sbjct: 368 QVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSR 427
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
AG V+ G ++F SM +G+ P +HYAC+VDLLGR G + A + I+ MP+ P +W
Sbjct: 428 AGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWG 487
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LLG+C+ HG+T+L ++AA KL +L+P DS V SN+ +G + +A ++RKEM+
Sbjct: 488 ALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIG 547
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
++K G SW+ ++NRVH F + H + I L +L G++K GYVP+ +L+L D+E
Sbjct: 548 IKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLE 607
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHNFMKLASDLLGK 565
EE K ++++HSEK+AL F ++ R V IRI KN+RIC+DCH+ +K S ++G+
Sbjct: 608 EEEKASEVWYHSEKIALAFGLITL-----PRGVPIRITKNLRICIDCHSAIKFISKIVGR 662
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI+VRD+NRFH FKD CSC DYW
Sbjct: 663 EIIVRDNNRFHRFKDGWCSCKDYW 686
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 210/446 (47%), Gaps = 44/446 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H++ + P F+ NHL+NMY+K + A+ + R VV+WT+LISG +
Sbjct: 29 VHAHILRTH-DTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHN 87
Query: 87 GNAEECFRLFCSLLQYF--------FPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
R F S L +F PN+F+ V + LH GK +HALALK
Sbjct: 88 -------RRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGN 140
Query: 135 DAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V+V + +MYSK+ EA +F+ M RN+ +WN+ ++ AI F K
Sbjct: 141 ILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKK 200
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
F + E P+ TF L ACA +V+ +H I + + +D +
Sbjct: 201 ----------FLCVDGE---PNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSV 247
Query: 254 ANALIHAYARCGSISLSKQVFDKM--TYHDLVSWNSILKAYALHGQAKEALQLF--SNMN 309
N LI Y +CG I S+ VF ++ ++VSW S+L A + + + A +F +
Sbjct: 248 FNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE 307
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
V+P S+LSAC+ G ++ G V H++ V + + +VDL G+ G I A
Sbjct: 308 VEPTDFMISSVLSACAELGGLELGRSV-HALALKACVEENIFVGSALVDLYGKCGSIEYA 366
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL- 428
E++ REMP E + V W+ ++G G+ +A ++ G +L +V + ++
Sbjct: 367 EQVFREMP-ERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSAC 425
Query: 429 --SGSFNKARLIRKEMKGSRVRKYPG 452
+G+ + I + M+G R PG
Sbjct: 426 SRAGAVERGLQIFESMRG-RYGIEPG 450
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 21/313 (6%)
Query: 110 LASVLISCDYLHGKLVHALALKF-SLDAHVYVANALINMYSK-SCADEAWKVFENMEFRN 167
L S ++S L G+ VHA L+ ++ N L+NMYSK + A V R
Sbjct: 14 LESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRT 73
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
V++W S+I+ C + AL F ++RE + P+ TF V KA A
Sbjct: 74 VVTWTSLISG---C----------VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASA 120
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
L +H+L K G D + + Y++ G ++ +FD+M + +L +WN+
Sbjct: 121 SLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNA 180
Query: 288 ILKAYALHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
+ G+ +A+ F ++ +P++ TF + L+AC+ ++ G ++ H +
Sbjct: 181 YMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQL-HGFIVRS 239
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGS-CRKHGETRLAE 402
+ + ++D G+ G I+ +E + + +V+ W LL + + H E R
Sbjct: 240 RYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACM 299
Query: 403 LAATKLKQLEPGD 415
+ K++EP D
Sbjct: 300 VFLQARKEVEPTD 312
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 25/196 (12%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +++ ACA G ++ +H + E ++FV + L+++Y K G ++ A +F
Sbjct: 314 MISSVLSACAELGGLELGRSVHALALKACVEE--NIFVGSALVDLYGKCGSIEYAEQVFR 371
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF-------CSL-LQYFFPNEFSLASVLISCD 118
EMP+RN+V+W A+I GYA G+ + LF C + L Y +L SVL +C
Sbjct: 372 EMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSY-----VTLVSVLSACS 426
Query: 119 YLHG-----KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVIS-W 171
++ ++ ++ ++ ++++ +S D A++ + M IS W
Sbjct: 427 RAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVW 486
Query: 172 NSMIAAFRACKLEAQA 187
+++ ACK+ +
Sbjct: 487 GALLG---ACKMHGKT 499
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/592 (37%), Positives = 317/592 (53%), Gaps = 79/592 (13%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
H QI+A LF HG L H I NF L YA G LD +
Sbjct: 45 HLLQIHAVLFR----HG-------LDHHPILNFK-----------LQRSYASLGRLDYSV 82
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASV--LISCDYL 120
LF +V WTA+I G+A G+ +LF ++ E SL S+ +++C
Sbjct: 83 ALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTM------PEKSLVSLTAMLTCYAK 136
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRA 180
HG+L D A +F+ ME R+ + WN MI +
Sbjct: 137 HGEL-----------------------------DAARVLFDGMEERDGVCWNVMIDGYTQ 167
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ EAL LFR++ + P+ T VL AC L VHS
Sbjct: 168 NGMP-------------NEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHS 214
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
I G + + + AL+ Y++CGS+ ++ VFDK+ D+V+WNS++ YA+HG ++E
Sbjct: 215 YIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQE 274
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
ALQLF +M + P + TF+ +LSAC H+G V EG +F+ M + +G+ P+++HY CMV
Sbjct: 275 ALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMV 334
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
+LLGR G + +A +L++ M +EPD V+W LLG+CR HG+ L E L +S
Sbjct: 335 NLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSG 394
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
++ +SNIY G+++ +R MK S V+K PG S IE+ N+VHEF +GG HP+R+
Sbjct: 395 TYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKE 454
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I+ LEE+ G LK GY P+T + LHDI E KE L HSEKLA+ F ++N +
Sbjct: 455 IYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINT----QPG 510
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+I+KN+R+C DCH KL S + G++IVVRD NRFHHF + CSC DYW
Sbjct: 511 TTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%), Gaps = 18/216 (8%)
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
T H +H+++ ++G + ++ L +YA G + S +F + + W +I+
Sbjct: 42 TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101
Query: 291 AYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+AL G A QLF M + + ++L+ + G + +F M E GV
Sbjct: 102 GHALRGDVVSAQQLFDTMP-EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC--- 157
Query: 351 DHYACMVDLLGRVGRILEAEKLIREM---PMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
+ M+D + G EA L R M +P+ V +L +C + G +
Sbjct: 158 --WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 215
Query: 408 LKQLEPGDSLGF-----VQMSNIYCLSGSFNKARLI 438
++ + + F + ++Y GS ARL+
Sbjct: 216 IEN----NGIQFNVHVGTALVDMYSKCGSLEDARLV 247
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/565 (36%), Positives = 323/565 (57%), Gaps = 35/565 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNA------EECFR 94
DLF+ + +I+MYAK G L +A LF +P NV+ + A+I+G+ + A E
Sbjct: 240 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALS 299
Query: 95 LFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYS 149
L+ + P+EF+ +S+L +C ++ GK +H LK S Y+ +ALI++YS
Sbjct: 300 LYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYS 359
Query: 150 KS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
S C ++ ++ F ++ +++++W SMI+ C ELF E+AL LF++
Sbjct: 360 DSGCMEDGYRCFRSLPKQDIVTWTSMISG---CVQN----ELF------EKALRLFQESI 406
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G+ PD T S V+ ACA L R + L KYGF T + N+ IH AR G +
Sbjct: 407 CYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVD 466
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
+ F +M D+VSW++++ ++A HG A++AL++F+ M V P+ TF+++L+ACS
Sbjct: 467 AVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACS 526
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H GLV +G + + M +G+ P + H C+VDLLGR GR+ +AE IR+ D+V+W
Sbjct: 527 HGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVW 586
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LL SCR HG+ +L A ++ LEP S +V + N+Y +G + A R MK
Sbjct: 587 RSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKER 646
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K PGLSWIE+ + VH F +G K HP+ AI+KKL E++ +++ + S I
Sbjct: 647 GVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGI 706
Query: 506 EEEHKEEQLYH-HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
E+ L HSEK+A+ F +++ + + IR+MKN+R+C DCH+ MKL S
Sbjct: 707 SS--SEQNLVGCHSEKIAVAFGMIH----LPQSAPIRVMKNLRVCRDCHSTMKLISGSEN 760
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI++RD RFHHF+ CSC DYW
Sbjct: 761 REIILRDGIRFHHFRGGSCSCGDYW 785
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 189/383 (49%), Gaps = 20/383 (5%)
Query: 30 HMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNA 89
H + +F++N L +MYA G + +AR +FD + + VSW +L+SGY + G
Sbjct: 126 HAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAR 185
Query: 90 EECFRLFCSLLQYFFP-NEFSLASVLISCDYLH------GKLVHALALKFSLDAHVYVAN 142
EE ++F + + N F+L S++ C + VH +K LDA +++A+
Sbjct: 186 EETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLAS 245
Query: 143 ALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEAL 201
A+I+MY+K A A +F+++ NVI +N+MIA F C+ EA + ++ EAL
Sbjct: 246 AMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGF--CRDEAAVGKEVSR-----EAL 298
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
L+ ++Q GM P TFS +L+AC +H + K+ F DD I +ALI Y
Sbjct: 299 SLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLY 358
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQPDSATFV 318
+ G + + F + D+V+W S++ + ++AL+LF ++PD T
Sbjct: 359 SDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMS 418
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
S+++AC+ + + G ++ + +G + + R G + + +EM
Sbjct: 419 SVMNACASLAVARTGEQI-QCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMES 477
Query: 379 EPDSVIWSVLLGSCRKHGETRLA 401
D V WS ++ S +HG R A
Sbjct: 478 R-DVVSWSAVISSHAQHGCARDA 499
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 199/411 (48%), Gaps = 52/411 (12%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGY---LDDARHL 64
Y L +C + +H H+ P LF+ N L+ Y + G L AR L
Sbjct: 5 YLDLLRSCTA---LPHVAAVHAHIARAHPT--ASLFLRNSLLAAYCRLGVGAPLHAAR-L 58
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----D 118
DEMP+RN VS+ LIS Y++ G F + F+ A+ L +C D
Sbjct: 59 IDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALD 118
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIA 176
GK VHA+ + L V+++N+L +MY+ SC + EA +VF+ E + +SWNS+++
Sbjct: 119 LRTGKAVHAMTVLDGLGNGVFLSNSLASMYA-SCGEMGEARRVFDAAEEHDDVSWNSLLS 177
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI--VLKACA-GLVTER 233
+ + EE L +F + G+ W +F++ ++K CA G R
Sbjct: 178 G-------------YVRAGAREETLKVFSLMCHHGLG--WNSFALGSIIKCCASGSDVGR 222
Query: 234 H-ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
H A AVH + K G + D +A+A+I YA+ G+++ + +F + +++ +N+++ +
Sbjct: 223 HIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGF 282
Query: 293 ----ALHGQ--AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
A G+ ++EAL L+S M +QP TF S+L AC+ AG G ++ H +
Sbjct: 283 CRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQI-HGQVLK 341
Query: 344 HGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
H D Y + ++DL G + + + R +P + D V W+ ++ C
Sbjct: 342 HSF--HDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQ-DIVTWTSMISGC 389
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%), Gaps = 22/290 (7%)
Query: 113 VLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSK---SCADEAWKVFENMEFRNV 168
+L SC L H VHA + A +++ N+L+ Y + A ++ + M RN
Sbjct: 8 LLRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNA 67
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+S+N +I+++ L +A+E FA+ + G+ D T++ L AC+
Sbjct: 68 VSYNLLISSYSRAGLPGRALETFARAR------------AAAGLRVDRFTYAAALAACSR 115
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ R AVH++ G + ++N+L YA CG + +++VFD HD VSWNS+
Sbjct: 116 ALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSL 175
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV-QEGNKVFHSMLENH 344
L Y G +E L++FS M + +S S++ C+ V + + H +
Sbjct: 176 LSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKA 235
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-GSCR 393
G+ L + M+D+ + G + A L + +P +P+ ++++ ++ G CR
Sbjct: 236 GLDADLFLASAMIDMYAKRGALTNAVALFKSVP-DPNVIVFNAMIAGFCR 284
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/594 (34%), Positives = 328/594 (55%), Gaps = 59/594 (9%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F + Y + AC+ G + + +Q+H H++ + D + + I MYA FG L +
Sbjct: 133 FRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKH--GLGGDGHILSSAIRMYASFGRLVE 190
Query: 61 ARHLFDEMPKR-NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY 119
AR + D+ + V W A+I GY + G E LF + P+ +++
Sbjct: 191 ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM-----PDRSMIST------- 238
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
NA+I+ +S+ + A + F+ M+ R+ ISW++MI +
Sbjct: 239 ---------------------WNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGY 277
Query: 179 --RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
C + EAL +F Q+Q+E + P VL ACA L
Sbjct: 278 IQEGCFM---------------EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR 322
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H+ + + D V+ +L+ YA+CG I L+ +VF+KM+ ++ SWN+++ A+HG
Sbjct: 323 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHG 382
Query: 297 QAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+A++A+ LFS M++ P+ TFV +L+AC+H GLVQ+G +F+SM + +GV PQ++HY C+
Sbjct: 383 RAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCI 442
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + EAEK++ +P EP +W LLG+CRKHG L E L +LEP +S
Sbjct: 443 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNS 502
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI-ENRVHEFASGGKRHPQR 475
+ +SNIY +G + + +RK MK ++ PG S I++ VH+F G HPQ
Sbjct: 503 GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQV 562
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I++ L+++ +L+ GY P+ S L DI+EE KE ++ HSEKLA+ F ++N
Sbjct: 563 KDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSP--- 619
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI+KN+R+C DCH+ KL S + +EI+VRD R+HHF++ CSC D+W
Sbjct: 620 -GTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCADE------AWKVFENMEFRNVISWNSM 174
H K HAL L+ Y+A +L+ Y+ + + +VF+ + NV WN M
Sbjct: 49 HLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCM 108
Query: 175 IAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKAC--AGLV 230
I + C ++N E +A+ L+ ++ P+ T+ VLKAC AG+V
Sbjct: 109 I---KVC------------IENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVV 153
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF-DKMTYHDLVSWNSIL 289
E VH+ + K+G D I ++ I YA G + ++++ DK D V WN+++
Sbjct: 154 AE--GVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMI 211
Query: 290 KAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
Y G+ + A +LF M + +T+ +++S S G+V+ + F M E +
Sbjct: 212 DGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEI--- 268
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPME---PDSVIWSVLLGSCRKHG 396
++ M+D + G +EA ++ +M E P + +L +C G
Sbjct: 269 --SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLG 316
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/575 (39%), Positives = 328/575 (57%), Gaps = 38/575 (6%)
Query: 25 MQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYA 84
M+ H+ + + P EP D F N +++ Y + + A+ FD MP ++ SW +I+GYA
Sbjct: 110 MEAHQ-LFDEIP-EP-DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 85 QHGNAEECFRLFCSLLQYFFPNEFS---LASVLISCDYLHGKLVHALALKFSLDAHVYVA 141
+ G E+ LF S+++ NE S + S I C L K H K + V
Sbjct: 167 RRGEMEKARELFYSMME---KNEVSWNAMISGYIECGDLE-KASHFF--KVAPVRGVVAW 220
Query: 142 NALINMYSKSCADE-AWKVFENMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
A+I Y K+ E A +F++M +N+++WN+MI+ + + E+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY-------------VENSRPED 267
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
L LFR + EG+ P+ S L C+ L + +H +++K +D +LI
Sbjct: 268 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
Y +CG + + ++F+ M D+V+WN+++ YA HG A +AL LF M ++PD T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
FV++L AC+HAGLV G F SM+ ++ V PQ DHY CMVDLLGR G++ EA KLIR M
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
P P + ++ LLG+CR H LAE AA KL QL ++ G+VQ++NIY +
Sbjct: 448 PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVA 507
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
+RK MK S V K PG SWIEI N+VH F S + HP+ ++I KKL+EL ++K GY P
Sbjct: 508 RVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKP 567
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN--QGSLCRERSVIRIMKNIRICVDCHN 554
E ALH++EEE KE+ L HSEKLA+ F + QGS I++ KN+RIC DCH
Sbjct: 568 ELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQ------IQVFKNLRICGDCHK 621
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K S++ +EI+VRD+ RFHHFKD CSC DYW
Sbjct: 622 AIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 133/346 (38%), Gaps = 90/346 (26%)
Query: 114 LISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWN 172
L+ DYL K S ++ N +I +S D A +VF M +N I+WN
Sbjct: 46 LVRSDYL---------TKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWN 96
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT- 231
S++ + + + QL E PD +++I+L V
Sbjct: 97 SLLIG----------------ISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNF 140
Query: 232 -----------ERHASAVHSLIAKYG---------------FEDDTVIANALIHAYARCG 265
+ A++ +++I Y E + V NA+I Y CG
Sbjct: 141 EKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECG 200
Query: 266 S-------------------------------ISLSKQVFDKMTYH-DLVSWNSILKAYA 293
+ L++ +F MT + +LV+WN+++ Y
Sbjct: 201 DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+ + ++ L+LF M ++P+S+ S L CS +Q G ++ H ++ + +
Sbjct: 261 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDV 319
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ + + G + +A KL E+ + D V W+ ++ +HG
Sbjct: 320 TALTSLISMYCKCGELGDAWKLF-EVMKKKDVVAWNAMISGYAQHG 364
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/559 (36%), Positives = 314/559 (56%), Gaps = 27/559 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +++ + G ++DA LF++MP RNV+SWT++I G +G + E +F +
Sbjct: 172 KDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKM 231
Query: 100 LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
L F +LA L +C + G +H L +K + Y++ +LI+ Y+ D
Sbjct: 232 LASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLID 291
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRA-CKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A +F + RNV+ W +++ + C+ +AL +F+ + R +
Sbjct: 292 NASSIFNDNVSRNVVVWTALLTGYGLNCR--------------HTDALQVFKGMMRMSVL 337
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ + + L +C GL VH++ K G E D ++N+L+ Y +CG I+ V
Sbjct: 338 PNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAV 397
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F +M+ ++VSWNSI+ A HG + AL LF+ M V PD T LLSAC H+G++
Sbjct: 398 FTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGML 457
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+G F +N G+ +HY+ MVDLLGR G++ EAE LI MP + + ++W LL
Sbjct: 458 TKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLS 517
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
S H +AE AA + L+P S + +SN+Y +G + + IRK+MK + K
Sbjct: 518 SSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQ 577
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG SWI I+ H F SG + HP I++KLE L G+LK +GYVP+ + HD+E E K
Sbjct: 578 PGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQK 637
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE L +HSE+LA+ F +++ E S I +MKN+RIC DCHN +KL S ++G+EIVVR
Sbjct: 638 EEMLSYHSERLAIGFGLIST----VEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVR 693
Query: 571 DSNRFHHFKDRICSCNDYW 589
D +RFHHF + CSC DYW
Sbjct: 694 DPSRFHHFHNGTCSCGDYW 712
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 189/423 (44%), Gaps = 37/423 (8%)
Query: 45 TNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF 104
+N+L++ + + G +D+AR LF++M V +T +I GYA G E+ +LF Y
Sbjct: 53 SNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLF-----YEM 107
Query: 105 P--NEFSLASVLISCDYLHGKLVHALAL--KFSLDAHVYVANALIN-MYSKSCADEAWKV 159
P + S S+L C G L A + K S + +V +IN + + A +
Sbjct: 108 PVKDLISWNSMLKGC-LKCGDLTMACNMFDKMS-ERNVVSWTTIINGLLEFGRVEVAECL 165
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EAL 201
F M ++V +WNSM+ F + AIELF KM N EAL
Sbjct: 166 FRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEAL 225
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
+F ++ A T + L ACA + T +H LI K G+ + I+ +LI Y
Sbjct: 226 VVFHKMLASFKATS-STLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFY 284
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQPDSATFV 318
A C I + +F+ ++V W ++L Y L+ + +ALQ+F M+V P+ ++
Sbjct: 285 ANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLT 344
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
S L++C V G +V H++ G+ + +V + + G I + + M
Sbjct: 345 SALNSCCGLEAVDRGREV-HAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSR 403
Query: 379 EPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
+ + V W+ ++ C +HG R A L A ++ D + + + SG K R
Sbjct: 404 K-NVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRC 462
Query: 438 IRK 440
K
Sbjct: 463 FFK 465
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/552 (37%), Positives = 305/552 (55%), Gaps = 53/552 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV L+ YAK G D AR FDE P+R+V +++ Y G E R+F +
Sbjct: 74 DLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMR 133
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVF 160
+ + ++ H Y N +++ A +VF
Sbjct: 134 ERDM-------------------------VSWNTMIHGYAVNGEVDL--------AREVF 160
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
M+ R+ SW+SM++A+ K + ++AL L+R+++ + PD T
Sbjct: 161 NGMDDRDAFSWSSMMSAY-------------TKGRRSKDALELWREMRAACVNPDCTTMV 207
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
VL AC+ + + VH + G E D + ALI YA+CG I S +VF M
Sbjct: 208 SVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVK 267
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+++W+S++ A HG +AL LFS M +QP+ TF+ +L +C+H GLV +G K F
Sbjct: 268 DVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYF 327
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
SM HGV P++ HY CMVDLLGR G I EA++LIR+MP EPD+VIW LLG+CR +
Sbjct: 328 SSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKN 387
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
+AE A KL+ L+P +V +SNIY + S+ +R+ ++ R+++ PG S IE
Sbjct: 388 VEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIE 447
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHH 517
+N +HEF SG + HP+ + I+K L E++ +L+ GY P T L L DI+E+ KE L H
Sbjct: 448 WQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALAEH 507
Query: 518 SEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHH 577
SEKLA+ F ++ + S +RI KN+R C DCH+ +KL + L +++++RD NRFHH
Sbjct: 508 SEKLAVAFGLLTTPA----GSTLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHH 563
Query: 578 FKDRICSCNDYW 589
F + CSC DYW
Sbjct: 564 FSEGRCSCKDYW 575
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 47/319 (14%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+ A G + +A ++ + M +D+ N +I+ YA G +D AR +F+ M
Sbjct: 111 VMLAAYVTRGEVAEARRVFDGM------RERDMVSWNTMIHGYAVNGEVDLAREVFNGMD 164
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKL 124
R+ SW++++S Y + +++ L+ + P+ ++ SVL +C + G
Sbjct: 165 DRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAE 224
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACK 182
VH ++ V + ALI+MY+K C D + +VF +M ++V++W+SMI
Sbjct: 225 VHQFVESNGVELDVKLGTALIDMYAK-CGDIENSVRVFHSMPVKDVLTWSSMIIG----- 278
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE-----RHA 235
A +AL LF ++ EG+ P+ TF VL +C GLV++
Sbjct: 279 --------LANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSM 330
Query: 236 SAVHSLIAK---YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKA 291
S VH + K YG ++ R G I +KQ+ M + D V W ++L A
Sbjct: 331 SVVHGVTPKVQHYG---------CMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGA 381
Query: 292 YALHGQAKEALQLFSNMNV 310
++ + A + + + V
Sbjct: 382 CRIYKNVEVAEEAMAKLRV 400
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 68/228 (29%)
Query: 235 ASAVHSLIAKYGFED-DTVIANALIHAYARCGSISL------------------------ 269
A+++H+ K GF D + AL+ AYA+ G L
Sbjct: 58 AASLHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYV 117
Query: 270 -------SKQVFDKMTYHDLVSWNSILKAYALHGQ------------------------- 297
+++VFD M D+VSWN+++ YA++G+
Sbjct: 118 TRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSA 177
Query: 298 ------AKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+K+AL+L+ M V PD T VS+LSACS G + G +V H +E++GV
Sbjct: 178 YTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEV-HQFVESNGVEL 236
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ ++D+ + G I + ++ MP++ D + WS ++ HG
Sbjct: 237 DVKLGTALIDMYAKCGDIENSVRVFHSMPVK-DVLTWSSMIIGLANHG 283
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 329/563 (58%), Gaps = 34/563 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+++FV N ++ Y+K +++ R LF+EMP+ + VS+ +I+ YA G +E LF L
Sbjct: 274 RNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQEL 333
Query: 100 L-------QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+ FP S+A+ S D G+ +HA + D V+N+L++MY+K C
Sbjct: 334 QFTTFDRKNFPFPTMLSIAAS--SLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAK-C 390
Query: 153 A--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+EA ++F + R+ + W +MI+A L E L LF +++R
Sbjct: 391 GKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH-------------ENGLKLFYEMRRA 437
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
++ D TF+ VLKA A L + +HS + + GF + AL+ YA C SI +
Sbjct: 438 NVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMN-VYSGCALLDMYANCASIKDA 496
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+ F++M+ ++V+WN++L AYA +G K L+ F M QPDS +F+ +L+ACSH
Sbjct: 497 IKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHC 556
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
LV+EG K F+ M + + P+ +HY MVD L R GR EAEKL+ +MP EPD ++W+
Sbjct: 557 RLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTS 616
Query: 388 LLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
+L SCR H LA AA +L ++ D+ +V MSNI+ +G ++ ++K M+
Sbjct: 617 VLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRG 676
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
VRK P SW+EI+++VH F++ +HPQ+ I +K+E L Q++ GY P+ S A +++
Sbjct: 677 VRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVD 736
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
+E K + L +HSE+LA+ FA++N E S I +MKN+R C DCH +K+ S ++G+E
Sbjct: 737 KESKIDSLKYHSERLAIAFALINTP----EGSPILVMKNLRACTDCHAAIKVISKIVGRE 792
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I VRDSNRFHHF+D CSC DYW
Sbjct: 793 ITVRDSNRFHHFRDGSCSCGDYW 815
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 184/388 (47%), Gaps = 30/388 (7%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
G + QA QL + M N ++ F + +I+ Y K G L AR +FD+ +R VV+WT
Sbjct: 56 RGQLCQARQLLDQMPN------RNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWT 109
Query: 78 ALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH--GKLVHALALKFSL 134
+I Y++ + F+LF + + P+ + ++L C+ L +L A A L
Sbjct: 110 TMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKL 169
Query: 135 DAHV--YVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
H+ V N L++ Y K+ D A ++F M + +S+N MI + L +AIELF
Sbjct: 170 GHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELF 229
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+M+N G P TF+ V+ A GL +H + K F +
Sbjct: 230 VEMQNL-------------GFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNV 276
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ 311
+ NA + Y++ ++ +++F++M D VS+N I+ AYA G+ KE++ LF +
Sbjct: 277 FVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFT 336
Query: 312 P---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+ F ++LS + + +Q G ++ H+ + P +VD+ + G+ E
Sbjct: 337 TFDRKNFPFPTMLSIAASSLDLQMGRQL-HAQVVVSMADPDFRVSNSLVDMYAKCGKFEE 395
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHG 396
A+++ + +V W+ ++ + + G
Sbjct: 396 ADRIFLRLSSR-STVPWTAMISANVQRG 422
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/588 (35%), Positives = 333/588 (56%), Gaps = 28/588 (4%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T A++ CA ++ + +H H++ + + D+FV+N LINMY+KFG L DA+ +
Sbjct: 222 TITVASILPVCAQSDDVINGVLIHLHVLKHGLD--SDVFVSNALINMYSKFGRLQDAQMV 279
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGK 123
FD+M R++VSW ++I+ Y Q+ + R F + L P+ ++ S+ L +
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQ 339
Query: 124 LVHALALKFS-----LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
+ L F LD V + NAL+NMY+K + A VF+ + ++ ISWN+++
Sbjct: 340 RISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTG 399
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L ++AI+ + M+ + + P+ T+ ++ A + + +
Sbjct: 400 YTQNGLASEAIDAYNMMEECRDTI------------PNQGTWVSIIPAYSHVGALQQGMK 447
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+ + K D +A LI Y +CG + + +F ++ V WN+I+ + +HG+
Sbjct: 448 IHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGR 507
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+EALQLF +M V+ D TFVSLLSACSH+GLV EG K F M + +G+ P L HY
Sbjct: 508 GEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYG 567
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLLGR G + +A +L+R MP++PD+ IW LL +C+ +G L LA+ +L +++
Sbjct: 568 CMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSE 627
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ +V +SNIY + + +R + +RK PG S + + ++ F +G + HP+
Sbjct: 628 NVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPK 687
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
I+K+L+ L ++K +GYVP+ S DIEE+ KE+ L HSE+LA+ F I++
Sbjct: 688 YTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIIST---- 743
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRI 582
RS IRI KN+R+C DCHN K S + +EIVVRDSNRFHHFKD I
Sbjct: 744 PPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 218/397 (54%), Gaps = 31/397 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV L+++Y+++G LD A +F +MP ++V SW A+ISG+ Q+GNA + +
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213
Query: 100 L-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ + ++AS+L C D ++G L+H LK LD+ V+V+NALINMYSK
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRL 273
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A VF+ ME R+++SWNS+IAA+ + + AL F+ +Q G+
Sbjct: 274 QDAQMVFDQMEVRDLVSWNSIIAAYE-------------QNNDPSTALRFFKGMQLGGIR 320
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED-DTVIANALIHAYARCGSISLSKQ 272
PD T + + L +R + ++ + + + D D VI NAL++ YA+ G ++ +
Sbjct: 321 PDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHT 380
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAG 328
VFD++ D +SWN+++ Y +G A EA+ ++ M + P+ T+VS++ A SH G
Sbjct: 381 VFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVG 440
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+Q+G K+ +++N LD + C++DL G+ GR+ +A L E+P + SV W+
Sbjct: 441 ALQQGMKIHAKLIKNS---LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVPWN 496
Query: 387 VLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQM 422
++ S HG A +L L + D + FV +
Sbjct: 497 AIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSL 533
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 197/405 (48%), Gaps = 29/405 (7%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
LH + LF++C N+ +LH ++ + Q++ ++ LIN+Y G + +
Sbjct: 19 LHKDADFNALFNSCV---NVNATKKLHALLL--VFGKSQNIVLSTKLINLYVTHGDISLS 73
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-----YFFPNEFSLASVLIS 116
R FD + K+N+ SW ++IS Y + G E L + P+ ++ +L +
Sbjct: 74 RSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKA 133
Query: 117 C-DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
C + GK VH K + V+VA +L+++YS+ D A KVF +M ++V SWN+M
Sbjct: 134 CVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAM 193
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ F + N AL + +++ EG+ D T + +L CA +
Sbjct: 194 ISG-------------FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H + K+G + D ++NALI+ Y++ G + ++ VFD+M DLVSWNSI+ AY
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+ AL+ F M ++PD T VSL S S + + ++ + +
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+V++ ++G + A + ++P + D++ W+ L+ ++G
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVTGYTQNG 404
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 155/310 (50%), Gaps = 21/310 (6%)
Query: 123 KLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +HAL L F ++ ++ LIN+Y + + F+ + +N+ SWNS+I+A+
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+A+ + LF + PD+ TF +LKAC LV + VH
Sbjct: 99 GKYHEAMNCVNQ---------LFSMCGGGHLRPDFYTFPPILKACVSLVDGKK---VHCC 146
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GFEDD +A +L+H Y+R G + ++ +VF M D+ SWN+++ + +G A A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L + + M V+ D+ T S+L C+ + V G + H + HG+ + +++
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVING-VLIHLHVLKHGLDSDVFVSNALIN 265
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE--TRLAELAATKLKQLEPGDS 416
+ + GR+ +A+ + +M + D V W+ ++ + ++ + T L +L + P D
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP-DL 323
Query: 417 LGFVQMSNIY 426
L V +++I+
Sbjct: 324 LTVVSLTSIF 333
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/524 (37%), Positives = 306/524 (58%), Gaps = 49/524 (9%)
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALA 129
+RN V++ ++SG+ G+ EE G+ VH+
Sbjct: 7 ERNKVTYVTVLSGFTTPGSLEE------------------------------GRRVHSRV 36
Query: 130 LKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
L+ V V AL+NMY K +EA FE + NV+SW++M+AA+ A+
Sbjct: 37 AGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMAL 96
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
EL+ +M + R+GMAP+ TF +L AC+ L +H+ +A+ GF+
Sbjct: 97 ELYREMGS-----------ARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFD 145
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
D V+ NAL++ Y RCGS+ +K VFD M D++SW+S++ A+A G+ EA++L+ M
Sbjct: 146 TDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRM 205
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
PD F+S+L ACS++G+V+ F S++ + V P L+HYACMVD+LGR G+
Sbjct: 206 LSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGK 265
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNI 425
+ +AE L+R MP P +++ +L +C+ + + E AA + +L+P +S ++ ++NI
Sbjct: 266 LRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANI 325
Query: 426 YCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEEL 485
Y + A IRK M+ ++K PG SWIE+ +RVHEF +G K HPQR+ I+ +++ L
Sbjct: 326 YSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRL 385
Query: 486 IGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKN 545
Q+K GY +T + L D+EE+ KE L++HSEKLA+ F +++ + +RI+KN
Sbjct: 386 GRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPP----GAPLRIVKN 441
Query: 546 IRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R+C DCH K+ S + G+EI+VRD+NRFHHF D +CSCNDYW
Sbjct: 442 LRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 179/378 (47%), Gaps = 32/378 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y T+ G++++ ++H + D+ V L+NMY K +++AR F++
Sbjct: 13 YVTVLSGFTTPGSLEEGRRVHSRVAG--AGLEVDVIVGTALVNMYGKCQSVEEARAAFEK 70
Query: 68 MPKRNVVSWTALISGYAQHGNAE---ECFRLFCSLLQYFFPNEFSLASVLISCDYL---- 120
+ + NVVSW+A+++ YAQ+G+A E +R S + PN + ++L +C +L
Sbjct: 71 ISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALA 130
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +HA + D + V NAL+N Y + + +A VF+ M R+VISW+SMI+A
Sbjct: 131 EGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISA-- 188
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL-VTERHASAV 238
FA+ +EA+ L+ ++ EG PD F VL AC+ V E
Sbjct: 189 -----------FAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFF 237
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD----LVSWNSILKAYAL 294
S++ E ++ R G + ++ + M +H ++ S K Y
Sbjct: 238 RSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTD 297
Query: 295 HGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+ + A ++ ++ + +S+ +++L + S A ++ ++ ++E G+ +
Sbjct: 298 VERGEAAAEVVFELDPE-NSSPYITLANIYSAAKRPKDAARI-RKLMEERGIKKKPG--C 353
Query: 355 CMVDLLGRVGRILEAEKL 372
+++L RV + +K+
Sbjct: 354 SWIEVLDRVHEFIAGDKM 371
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 7/195 (3%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
++ G+ + T+ VL + VHS +A G E D ++ AL++ Y +C S
Sbjct: 1 MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLL 321
+ ++ F+K++ ++VSW+++L AYA +G A+ AL+L+ M + P+ TF++LL
Sbjct: 61 VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
ACS G + EG K+ H+ + G L +V+ GR G + +A K++ + D
Sbjct: 121 DACSFLGALAEGRKI-HAAVAERGFDTDLVVCNALVNFYGRCGSLGDA-KIVFDGMRRRD 178
Query: 382 SVIWSVLLGSCRKHG 396
+ WS ++ + + G
Sbjct: 179 VISWSSMISAFAQRG 193
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/596 (36%), Positives = 333/596 (55%), Gaps = 40/596 (6%)
Query: 8 YATLFHACALHGNIKQAMQLH----EHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
Y+T+ + CA ++ A QLH +H +++ N V L++ Y K G LD A
Sbjct: 261 YSTVINLCANLKHLGLARQLHSSVLKHGFHSYGN------VMTALMDAYNKAGQLDKALD 314
Query: 64 LFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH 121
+F M +NVVSWTA+I G Q+G+ LF + + PN+ + +++L +
Sbjct: 315 VFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASF 374
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
+HA +K + + V AL+ YSK C+ +EA +F+ ++ ++V+SW++M+ +
Sbjct: 375 PPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCY-- 432
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA----GLVTERHAS 236
A+ + A F ++ G+ P+ T S + ACA G+ R
Sbjct: 433 -----------AQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQ-- 479
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
H++ K+ D +++AL+ YAR GSI ++ VF++ T DL+SWNS+L YA HG
Sbjct: 480 -FHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHG 538
Query: 297 QAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+++AL +F M V+ D TF+S++ C+HAGLV+EG + F M+ ++G+ P +DHY
Sbjct: 539 YSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHY 598
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
ACMVDL R G++ E LI MP IW LLG+CR H L +LAA KL LEP
Sbjct: 599 ACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEP 658
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
DS +V +SNIY +G + + +RK M +VRK G SWI+I+N+VH F + K HP
Sbjct: 659 LDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHP 718
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
E I+ KL + +LK GY P+TS HD+ E+ KE L HSE+LAL F ++
Sbjct: 719 LSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIAT--- 775
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + I KN+R+ D H MK+ S++ +EIV+RD RFHHFK +CSC D+W
Sbjct: 776 -PPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 35/389 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V L++MY + + D R +F+ M KRNVV+WT+L++GY Q G + LF +
Sbjct: 90 DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149
Query: 100 LQYFFPNEFSLASVL--ISCDYL--HGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ +PN F+ +SVL ++ + G+ VHA ++KF + V+V N+L+NMY+K +
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVE 209
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA VF ME R+++SWN+++A + +A++LF + ++ + +
Sbjct: 210 EARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLF---HDSRSSITMLTE-------- 258
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T+S V+ CA L A +HS + K+GF + AL+ AY + G + + VF
Sbjct: 259 --STYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVF 316
Query: 275 DKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
M+ ++VSW +++ +G A LFS M V P+ T+ ++L+ +
Sbjct: 317 LLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPP 376
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL--IREMPMEPDSVIWSVL 388
Q +V + N+ P + L+ ++ E+ I +M + D V WS +
Sbjct: 377 QIHAQVIKT---NYECTPTVG-----TALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAM 428
Query: 389 LGSCRKHGETRLAELAATKLKQ--LEPGD 415
L + G+ A A K+ L+P +
Sbjct: 429 LTCYAQAGDCNGATNAFIKMTMHGLKPNE 457
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 179/371 (48%), Gaps = 30/371 (8%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLL 100
+FV N L+NMYAK G +++AR +F M R++VSW L++G +G E +LF S
Sbjct: 192 VFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRS 251
Query: 101 QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DE 155
E + ++V+ C L + +H+ LK ++ V AL++ Y+K+ D+
Sbjct: 252 SITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDK 311
Query: 156 AWKVFENME-FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A VF M +NV+SW +MI C ++ I L A LF +++ +G+AP
Sbjct: 312 ALDVFLLMSGSQNVVSWTAMI---DGC-IQNGDIPLAAA---------LFSRMREDGVAP 358
Query: 215 DWCTFSIVLKACAGLVTE-RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+ T+S +L V+E +H+ + K +E + AL+ +Y++ S + +
Sbjct: 359 NDLTYSTILT-----VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSI 413
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLV 330
F + D+VSW+++L YA G A F M ++P+ T S + AC+
Sbjct: 414 FKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAG 473
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ + FH++ H L + +V + R G I E + + E + D + W+ +L
Sbjct: 474 VDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSI-ENAQCVFERQTDRDLLSWNSMLS 532
Query: 391 SCRKHGETRLA 401
+HG ++ A
Sbjct: 533 GYAQHGYSQKA 543
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 27/308 (8%)
Query: 118 DYLHGKLVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
D + GK +HAL ++ D + V +L++MY + KVFE M RNV++W S++
Sbjct: 70 DRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLL 129
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ QA L + + LF +++ EG+ P+ TFS VL A
Sbjct: 130 TGY------IQAGVLL-------DVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLG 176
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VH+ K+G + N+L++ YA+CG + ++ VF +M D+VSWN+++ L+
Sbjct: 177 QHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLN 236
Query: 296 GQAKEALQLFSN------MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
G+ EALQLF + M + +T ++L + H GL ++ HS + HG
Sbjct: 237 GRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQ----LHSSVLKHGFHSY 292
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
+ ++D + G++ +A + M + V W+ ++ C ++G+ LA ++++
Sbjct: 293 GNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMR 352
Query: 410 Q--LEPGD 415
+ + P D
Sbjct: 353 EDGVAPND 360
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 340/593 (57%), Gaps = 28/593 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHM-INNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
T+ AC+ ++ +H + ++ F +E L V N ++ MY + G +++AR +FD M
Sbjct: 252 TILSACSSPALVQDGRLIHSCIALSGFESE---LLVANAVMTMYGRCGAVEEARKVFDAM 308
Query: 69 PK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC----DYLHG 122
+ R+VVSW ++S Y + ++ +L+ + ++ + S+L +C D G
Sbjct: 309 DEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM--QLRADKVTYVSLLSACSSAEDVGLG 366
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+++H + L+ +V V NAL++MY+K + EA VF+ ME R++ISW ++I+A+
Sbjct: 367 RVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRR 426
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+L A+A LF +M L L + + + PD F +L ACA + V
Sbjct: 427 RLVAEACHLFQQM------LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ 480
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKE 300
A G D + A+++ Y +CG I +++FD + + D+ WN+++ YA GQ+ E
Sbjct: 481 AASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHE 540
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML-ENHGVVPQLDHYACM 356
AL+LF M V+PDS +FVS+L ACSH GL +G F SM E V + H+ C+
Sbjct: 541 ALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCV 600
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
DLLGR GR+ EAE+ + ++P++PD+V W+ LL +CR H + + A+ A KL +LEP +
Sbjct: 601 ADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCA 660
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
G+V +SNIY ++ +RK M V+K G+S IEI +H+FA+G HP+
Sbjct: 661 TGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNR 720
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I ++L +L Q+K GYVP+T + LH ++E+ KE L+ HSE+LA+ +++
Sbjct: 721 EIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPL---- 776
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R+ KN+R+C DCH KL S + G++IVVRD RFH FKD CSC DYW
Sbjct: 777 GTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 226/482 (46%), Gaps = 39/482 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
YA L CA + + ++H + N P +L + NH+++MYA DA+ FD
Sbjct: 46 YARLLQRCARAQALPEGRKIHSLAVKHNLL--PGNLILGNHIVSMYAHCDSPGDAKAAFD 103
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC----DYLH 121
+ +RN+ SWT L++ +A G ++E R + Q P+ + + L SC
Sbjct: 104 ALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRD 163
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENME-FRNVISWNSMIAAFR 179
G +H + + L+ V+NAL+NMY K + A +VF ME RNVISW+ M A
Sbjct: 164 GIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGA-- 221
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A N EAL FR + G+ +L AC+ + +H
Sbjct: 222 -----------HALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIH 270
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM--TYHDLVSWNSILKAYALHGQ 297
S IA GFE + ++ANA++ Y RCG++ +++VFD M D+VSWN +L AY + +
Sbjct: 271 SCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDR 330
Query: 298 AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
K+A+QL+ M ++ D T+VSLLSACS A V G +V H + N + + +V
Sbjct: 331 GKDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLG-RVLHKQIVNDELEKNVIVGNALV 389
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRK--------HGETRLAELAATKL 408
+ + G EA + + ME S+I W+ ++ + + H ++ EL
Sbjct: 390 SMYAKCGSHTEARAVFDK--MEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGS 447
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK--GSRVRKYPGLSWIEIENRVHEFA 466
Q D+L FV + N + + +++ ++ G K G + + + + E
Sbjct: 448 SQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIE 507
Query: 467 SG 468
G
Sbjct: 508 EG 509
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 182/370 (49%), Gaps = 28/370 (7%)
Query: 122 GKLVHALALKFSL-DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H+LA+K +L ++ + N +++MY+ +A F+ +E RN+ SW ++AAF
Sbjct: 62 GRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAF- 120
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A +E L +++++G+ PD TF L +C + R +H
Sbjct: 121 ------------AISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIH 168
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQA 298
++ E D ++NAL++ Y +CGS+S +K+VF KM +++SW+ + A+ALHG
Sbjct: 169 QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNV 228
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
EAL+ F M ++ + V++LSACS LVQ+G ++ HS + G +L
Sbjct: 229 WEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG-RLIHSCIALSGFESELLVANA 287
Query: 356 MVDLLGRVGRILEAEKLIREMPME-PDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
++ + GR G + EA K+ M D V W+++L S H + + + QL
Sbjct: 288 VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML-SAYVHNDRGKDAIQLYQRMQLR-A 345
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D + +V + + + R++ K++ + K + + N + + H +
Sbjct: 346 DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN-----VIVGNALVSMYAKCGSHTE 400
Query: 475 REAIFKKLEE 484
A+F K+E+
Sbjct: 401 ARAVFDKMEQ 410
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 103/195 (52%), Gaps = 7/195 (3%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG-FEDDTVIANALIHAYARCG 265
L+++ + + T++ +L+ CA +HSL K+ + ++ N ++ YA C
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
S +K FD + +L SW ++ A+A+ GQ+KE L+ M V+PD+ TF++ L
Sbjct: 94 SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 323 ACSHAGLVQEGNKVFHSMLENH-GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
+C +++G ++ ++++ + P++ + ++++ + G + A+++ +M +
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERTRN 211
Query: 382 SVIWSVLLGSCRKHG 396
+ WS++ G+ HG
Sbjct: 212 VISWSIMAGAHALHG 226
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 329/594 (55%), Gaps = 39/594 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + + C G + QA +L M +D N +++ Y +FG +DDA LF +
Sbjct: 131 WTAMVNGCFRSGKVDQAERLFYQM------PVKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN-EFSLASVLISCD----YLHG 122
MP +NV+SWT +I G Q+ + E LF ++L+ + V+ +C + G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 123 KLVHALALKFSLDAHVYVANALINMYS--KSCADEAWKVFENMEFRNVISWNSMIAAFRA 180
VH L +K YV+ +LI Y+ K D KVF+ V W ++++ +
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR-KVFDEKVHEQVAVWTALLSGY-- 301
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ K E+AL +F + R + P+ TF+ L +C+ L T +H
Sbjct: 302 -----------SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G E D + N+L+ Y+ G+++ + VF K+ +VSWNSI+ A HG+ K
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKW 410
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE--NHGVVPQLDHYAC 355
A +F M N +PD TF LLSACSH G +++G K+F+ M NH + ++ HY C
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH-IDRKIQHYTC 469
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVD+LGR G++ EAE+LI M ++P+ ++W LL +CR H + E AA + L+
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S +V +SNIY +G ++ +R +MK + + K PG SW+ I + HEF SG + H R
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSR 589
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
I++KLE L +LK +GY P+ ALHD+E+E KEE L++HSE+LA+ F ++N
Sbjct: 590 --IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINT----V 643
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E S + +MKN+R+C DCH +KL S ++G+EIV+RD RFHHFK+ CSC DYW
Sbjct: 644 EGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 202/419 (48%), Gaps = 41/419 (9%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
+ N P+ L+ +I Y + L DA +LFDEMP R+VVSW ++ISG + G+
Sbjct: 57 VFNQVPSPHVSLY--TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMN 114
Query: 91 ECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMYS 149
+LF + + + S +++ C + GK+ A L + + A N++++ Y
Sbjct: 115 TAVKLFDEMPE---RSVVSWTAMVNGC-FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
+ D+A K+F+ M +NVISW +MI C L+ + EAL LF+ +
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMI-----CGLDQN--------ERSGEALDLFKNML 217
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R + F+ V+ ACA VH LI K GF + ++ +LI YA C I
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
S++VFD+ + + W ++L Y+L+ + ++AL +FS M ++ P+ +TF S L++CS
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQL----DHYA--CMVDLLGRVGRILEAEKLIREMPME 379
G + G E HGV +L D + +V + G + +A + ++ +
Sbjct: 338 ALGTLDWGK-------EMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FK 389
Query: 380 PDSVIWSVLLGSCRKHGETRLAELAATKLKQL--EPGDSLGFVQMSNIYCLSGSFNKAR 436
V W+ ++ C +HG + A + ++ +L EP D + F + + G K R
Sbjct: 390 KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP-DEITFTGLLSACSHCGFLEKGR 447
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/525 (38%), Positives = 300/525 (57%), Gaps = 26/525 (4%)
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYL----HGKLVHAL 128
VSW +LI G + G E+ F + +E++L SVL S + + VH L
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 129 ALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
+K +A+ V NALI+MY+K D A VF M ++V+SW S++ + +A
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I+LF KM+ G+ PD + VL ACA L +H+ + K G
Sbjct: 127 IKLFCKMR-------------ISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGL 173
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E + N+L+ YA+CGSI + + FD M D++SW +++ YA +G+ K +LQ +
Sbjct: 174 ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQ 233
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M +PD TF+ LL ACSH GL+ G F +M + +G+ P +HYACM+DLLGR G
Sbjct: 234 MIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSG 293
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
++ EA+ L+ +M + PD+V+W LL +CR H E L E+AA L +LEP +S+ +V +SN
Sbjct: 294 KLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSN 353
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
+Y +G + A IR+ M+ + K PG SWIE ++V F S + HP R I+ K++E
Sbjct: 354 MYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDE 413
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
+I +K GYVP+ S ALHD ++E KE L +HSEKLA+ F ++ + + IRI K
Sbjct: 414 IIMLIKEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLT----VPQGAPIRIFK 469
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N+R+C DCH MK S + + I++RDSN FHHF + CSC DYW
Sbjct: 470 NLRVCGDCHTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 167/316 (52%), Gaps = 28/316 (8%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
V N LI+MYAK G LD A +F +M ++VVSWT+L++GY+ +G+ EE +LFC + +
Sbjct: 77 LVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRIS 136
Query: 102 YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--E 155
+P++ ++ASVL +C L G+ +HA +K L++ + V N+L+ MY+K C +
Sbjct: 137 GVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAK-CGSIVD 195
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A + F+NM R+VISW ++I +A+ + +L + Q+ G PD
Sbjct: 196 ANRAFDNMPTRDVISWTALIVG-------------YAQNGRGKHSLQFYDQMIATGTKPD 242
Query: 216 WCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+ TF +L AC+ GL+ A ++ YG + +I R G ++ +K +
Sbjct: 243 YITFIGLLFACSHNGLLGSGRAY-FEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGL 301
Query: 274 FDKMTY-HDLVSWNSILKAYALHGQAKEALQLFSNM-NVQP-DSATFVSLLSACSHAGLV 330
++M D V W ++L A +H + + N+ ++P +S +V L + S AG
Sbjct: 302 LNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKW 361
Query: 331 QEGNKVFHSMLENHGV 346
++ ++ ++ + G+
Sbjct: 362 EDAARI-RRLMRSRGI 376
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
MEF + +SWNS+I C E EE+AL F++++ M D T V
Sbjct: 1 MEFDDEVSWNSLIL---GCVREG----------FEEDALSFFQKMRSRDMKIDEYTLPSV 47
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L + A + ++A +VH LI K GFE ++ NALI YA+ G + + VF KM D+
Sbjct: 48 LNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDV 107
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
VSW S++ Y+ +G +EA++LF M V PD S+LSAC+ ++ G ++ H+
Sbjct: 108 VSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQI-HA 166
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
L G+ L +V + + G I++A + MP D + W+ L+ ++G +
Sbjct: 167 TLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTR-DVISWTALIVGYAQNGRGK 225
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A++ ACA + Q+H ++ + L V N L+ MYAK G + DA FD M
Sbjct: 146 ASVLSACAELTVMDFGQQIHATLVKS--GLESSLSVDNSLVTMYAKCGSIVDANRAFDNM 203
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
P R+V+SWTALI GYAQ+G + + + ++ P+ + +L +C +
Sbjct: 204 PTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSH 255
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 329/579 (56%), Gaps = 52/579 (8%)
Query: 22 KQAMQLHEHMINN---FPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSW 76
KQ Q+H M+ F D F + LI A F LD A+ +FD++P N+ +W
Sbjct: 49 KQLKQIHAQMLRTGLFF-----DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTW 103
Query: 77 TALISGYAQHGNAEECFRLFCSLLQYF--FPNEFSLASVLISCDYLH----GKLVHALAL 130
LI YA N + +F +L FP++F+ ++ + L GK H + +
Sbjct: 104 NTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVI 163
Query: 131 KFSLDAHVYVANALINMYSKSCADEA--WKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
K L + V++ N+LI+ Y+K C + ++VF N R+V+SWNSMI AF
Sbjct: 164 KVLLGSDVFILNSLIHFYAK-CGELGLGYRVFVNXPRRDVVSWNSMITAF---------- 212
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
+ EEAL LF++++ + + P+ T VL ACA VHS I +
Sbjct: 213 ---VQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIX 269
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA------------LHG 296
+ ++NA++ Y +CGS+ +K++FDKM D+VSW ++L YA +HG
Sbjct: 270 ESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHG 329
Query: 297 QAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
K+A+ LFS M V+P++ TF ++L ACSH GLV+EG F+ M +GV+P + HY
Sbjct: 330 HGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHY 389
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
ACMVD+LGR G + EA +LI +MPM P + +W LLG+C H LAE A ++L +LEP
Sbjct: 390 ACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEP 449
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
G+ +V +SNIY +G +++ +RK M+ ++K PG S IE++ VHEF G HP
Sbjct: 450 GNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 509
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGS 532
+ I+ KL+E++ +L+ +GYVP S L +EEE KE+ L+ HSEKLA+ F +++ G
Sbjct: 510 SAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTG- 568
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ IRI+KN+R+C DCH+ KL S L +EI++RD
Sbjct: 569 ---QSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRD 604
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 59/587 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + AC+ G + + +Q+H H++ + D + + I MYA FG L +AR + D+
Sbjct: 141 YPAVLKACSDSGVVAEGVQVHAHLVKH--GLGGDGHILSSAIRMYASFGRLVEARRILDD 198
Query: 68 MPKR-NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVH 126
+ V W A+I GY + G E LF + P+ +++
Sbjct: 199 KGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM-----PDRSMIST-------------- 239
Query: 127 ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF--RACKL 183
NA+I+ +S+ + A + F+ M+ R+ ISW++MI + C +
Sbjct: 240 --------------WNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFM 285
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
EAL +F Q+Q+E + P VL ACA L +H+
Sbjct: 286 ---------------EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 330
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ + D V+ +L+ YA+CG I L+ +VF+KM+ ++ SWN+++ A+HG+A++A+
Sbjct: 331 RNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAID 390
Query: 304 LFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
LFS M++ P+ TFV +L+AC+H GLVQ+G +F+SM + +GV PQ++HY C+VDLLGR
Sbjct: 391 LFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRA 450
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
G + EAEK++ +P EP +W LLG+CRKHG L E L +LEP +S + +S
Sbjct: 451 GLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLS 510
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI-ENRVHEFASGGKRHPQREAIFKKL 482
NIY +G + + +RK MK ++ PG S I++ VH+F G HPQ + I++ L
Sbjct: 511 NIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQML 570
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
+++ +L+ GY P+ S L DI+EE KE ++ HSEKLA+ F ++N + IRI
Sbjct: 571 DKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSP----GTTIRI 626
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+KN+R+C DCH+ KL S + +EI+VRD R+HHF++ CSC D+W
Sbjct: 627 VKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA------DEAWKVFENMEFRNVISWNSM 174
H K HAL L+ Y+A +L+ Y+ + + +VF+ + NV WN M
Sbjct: 50 HLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCM 109
Query: 175 IAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKAC--AGLV 230
I + C ++N E +A+ L+ ++ P+ T+ VLKAC +G+V
Sbjct: 110 I---KVC------------IENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVV 154
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF-DKMTYHDLVSWNSIL 289
E VH+ + K+G D I ++ I YA G + ++++ DK D V WN+++
Sbjct: 155 AE--GVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMI 212
Query: 290 KAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
Y G+ + A +LF M + +T+ +++S S G+V+ + F M E +
Sbjct: 213 DGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEI--- 269
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPME---PDSVIWSVLLGSCRKHG 396
++ M+D + G +EA ++ +M E P + +L +C G
Sbjct: 270 --SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLG 317
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ ++ ACA G + Q +H + N + D + L++MYAK G +D A +F+
Sbjct: 305 VLPSVLSACANLGALDQGRWIHTYAKRN--SIQLDGVLGTSLVDMYAKCGRIDLAWEVFE 362
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLV- 125
+M + V SW A+I G A HG AE+ LF + +PNE + VL +C HG LV
Sbjct: 363 KMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM--DIYPNEITFVGVLNAC--AHGGLVQ 418
Query: 126 ------HALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVIS-WNSMIAA 177
+++ ++ ++ + ++++ ++ EA KV ++ + W +++ A
Sbjct: 419 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 478
Query: 178 FR 179
R
Sbjct: 479 CR 480
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 314/561 (55%), Gaps = 38/561 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
FV LI+MY K +D+AR LFDE P ++ V + +L+SGYA + ++ LFC +
Sbjct: 46 FVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMR 105
Query: 101 QYFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
+ N ++ ++ C G VH +KF LD V N L+ MY KS D
Sbjct: 106 ELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEID 165
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
K+F+ M + +I+WN+MI + L +EL+ ++++ +G P
Sbjct: 166 CGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELY-------------KEMESKGFCP 212
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T VL +CA L V + +GF + + NAL++ YARCG++ ++ +F
Sbjct: 213 DPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIF 272
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M +VSW +I+ Y +HGQ + A+ LF M ++PD FVS+LSACSHAGL
Sbjct: 273 DGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTN 332
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G F M +G+ P +HY+CMVDLLGR GR+ EA +LI M + D +W LLG+
Sbjct: 333 KGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGA 392
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ H LAELA ++ +LEP ++ +V +SN+Y +G+ +R M+ +++K P
Sbjct: 393 CKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDP 452
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S++E + RVH F +G + HPQ I+KKL EL +K + + + E +E
Sbjct: 453 GCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELENLVKDLDGCKKN-------DHERRE 505
Query: 512 EQLYH---HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
E L HSEKLA+ FA++N R+ + I I+KN+RIC DCH F+KL S ++ ++ V
Sbjct: 506 EYLNSMGVHSEKLAVAFALLNT----RKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFV 561
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+ RFHHFK+ CSC +YW
Sbjct: 562 VRDATRFHHFKNGFCSCKEYW 582
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 28/323 (8%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
L C + GN+ M +H + + D V N L+ MY K G +D R LFDEMP+
Sbjct: 119 LVQPCGIPGNLGLGMCVHGFCVKFGLD--MDSSVGNCLLTMYVKSGEIDCGRKLFDEMPR 176
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GKLV 125
+ +++W A+I+GYAQ+G A L+ + + F P+ +L VL SC +L GK V
Sbjct: 177 KGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEV 236
Query: 126 HALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKL 183
F ++ ++ NAL+NMY++ C + +A +F+ M ++V+SW ++I + +
Sbjct: 237 ERKMEGFGFSSNPFLNNALVNMYAR-CGNLKKARDIFDGMPVKSVVSWTAIIGGY---GM 292
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSL 241
Q E A+ LF ++ R G+ PD F VL AC AGL T + +
Sbjct: 293 HGQG----------EVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGL-TNKGLDYFGVM 341
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKE 300
KYG + ++ R G ++ ++++ + M D W ++L A +H +
Sbjct: 342 ERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVEL 401
Query: 301 ALQLFSN-MNVQPDSATFVSLLS 322
A F + ++P + + LLS
Sbjct: 402 AELAFEQVIELEPTNTGYYVLLS 424
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R G +P+ TF +K+CA L +H + K G + + +LI Y +C I
Sbjct: 3 RSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLID 62
Query: 269 LSKQVFDK--MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
++++FD+ + V +NS+L YAL+ + K+ + LF M V+ + T + L+
Sbjct: 63 NARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQP 122
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C G + G V H G+ C++ + + G I KL EMP + +
Sbjct: 123 CGIPGNLGLGMCV-HGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRK-GLI 180
Query: 384 IWSVLLGSCRKHG 396
W+ ++ ++G
Sbjct: 181 TWNAMINGYAQNG 193
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/591 (35%), Positives = 338/591 (57%), Gaps = 29/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ ++ ++H + + D+FV N L+ +YAK G + A +F
Sbjct: 176 FPCVLKACSALPALEMGRRVHGQIFRH--GFESDVFVQNGLVALYAKCGEIVRANAVFGR 233
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
+ R +VSWT++ISGYAQ+G E R+F + + P+ +L SVL + D HG
Sbjct: 234 LVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHG 293
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFEN-MEFRNVISWNSMIAAFRAC 181
K +H +K L+ + +L ++Y+K ++F N +E ++I WN+MI+ +
Sbjct: 294 KSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGY--- 350
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
K EEA+ LFR ++ + + PD T + + ACA + + A +
Sbjct: 351 ----------VKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEY 400
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I+ F +D ++ +LI YA+CGS+ +++ VFD++ D+V W++++ Y LHGQ +E+
Sbjct: 401 ISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRES 460
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ LF M V P+ TFV LL+AC ++GLV+EG +FH M ++G+ P+ HYAC+VD
Sbjct: 461 IILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVD 519
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G + A + MP+EP +W LL +C+ H L E AA +L L+P ++
Sbjct: 520 LLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGH 579
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+VQ+SN+Y S ++ +R M+ + K+ G S IEI ++ F +G K HP+ + I
Sbjct: 580 YVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEI 639
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
F+++E+L +LK G+VP T LHD+ E EE L +HSE+LA+ + +++ +
Sbjct: 640 FEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPP----GT 695
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+R C +CH +KL S L+ +EIVVRD+ RFHHFKD CSC DYW
Sbjct: 696 TLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 187/389 (48%), Gaps = 36/389 (9%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
F+ L+N + G + AR LFD+ P +V W A++ Y++HG ++ + +
Sbjct: 108 FLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167
Query: 102 YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--E 155
P+ FS VL +C L G+ VH + ++ V+V N L+ +Y+K C +
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAK-CGEIVR 226
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A VF + R ++SW S+I+ +A+ EAL +F ++++ + PD
Sbjct: 227 ANAVFGRLVDRTIVSWTSIISG-------------YAQNGQPIEALRIFSEMRKTNVRPD 273
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
W VL+A + H ++H + K G E + + +L YA+CG + +++ F+
Sbjct: 274 WIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFN 333
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
++ L+ WN+++ Y +G A+EA++LF M N++PDS T S ++AC+ G ++
Sbjct: 334 QVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLEL 393
Query: 333 GN----KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+ S N +V ++D + G + A + +P + D V+WS +
Sbjct: 394 ARWMDEYISMSEFRNDVIV-----NTSLIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAM 447
Query: 389 LGSCRKHGETRLAELAATKLKQ--LEPGD 415
+ HG+ R + + ++Q + P D
Sbjct: 448 MVGYGLHGQGRESIILFHAMRQAGVSPND 476
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 158/355 (44%), Gaps = 28/355 (7%)
Query: 103 FFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK----SCADEAWK 158
F P++F + + S H ++A L L ++ L+N S SCA K
Sbjct: 72 FKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCAR---K 128
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F+ +V WN+++ + AIE++A+M Q ++PD +
Sbjct: 129 LFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARM-------------QVACVSPDGFS 175
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F VLKAC+ L VH I ++GFE D + N L+ YA+CG I + VF ++
Sbjct: 176 FPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLV 235
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
+VSW SI+ YA +GQ EAL++FS M NV+PD VS+L A + ++ G K
Sbjct: 236 DRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHG-K 294
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
H + G+ + D + L + G ++ A ++ P + W+ ++ K+
Sbjct: 295 SIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVE-NPSLIFWNAMISGYVKN 353
Query: 396 G--ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
G E + K K + P DS+ GS AR + + + S R
Sbjct: 354 GYAEEAIELFRLMKSKNIRP-DSITVTSSIAACAQIGSLELARWMDEYISMSEFR 407
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/543 (37%), Positives = 318/543 (58%), Gaps = 29/543 (5%)
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS--- 116
DAR FDE+P N V TA+ SGY ++ LF +++ + A+ L++
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 117 ----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVI 169
D +HAL K + + V N +++ Y+K + + A KVF+ ME R+V+
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVV 120
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SWNSMIA + + A+AI L++KM N G+ + S VL ACA
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLN-----------VGGGIKCNAVALSAVLLACAHA 169
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+ +H+ + + G E++ + +++ Y++CG + ++ + F K+ +++SW++++
Sbjct: 170 GAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMI 229
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
Y +HG+ +EAL++F+ M ++P+ TF+S+L+ACSHAGL+ EG +++M + G+
Sbjct: 230 TGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGI 289
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
++HY CMVDLLGR G + EA LI+EM ++PD+ IW LL +CR H LAE++
Sbjct: 290 EAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVK 349
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
+L +L+ +S +V +SNIY +G + IR +K R+ K PG S E++ +++ F
Sbjct: 350 RLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFY 409
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
G K HPQ I+ LE+L+ +++ GYVP T LHD++EE KE L HSEKLA+ FA
Sbjct: 410 VGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFA 469
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
+MN RSVI I+KN+R+C DCH MK + + +EI++RD RFHHFKD +CSC
Sbjct: 470 LMNS----VPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCR 525
Query: 587 DYW 589
DYW
Sbjct: 526 DYW 528
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 95/176 (53%), Gaps = 14/176 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
ACA G I+ +H ++ E +++V +++MY+K G ++ A F ++ ++N+
Sbjct: 165 ACAHAGAIQTGKHIHNQVVRMGLEE--NVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNI 222
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV------- 125
+SW+A+I+GY HG +E +F + + PN + SVL +C H L+
Sbjct: 223 LSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS--HAGLLDEGRYWY 280
Query: 126 HALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFR 179
+A+ +F ++A V ++++ ++ C DEA+ + + M+ + + W ++++A R
Sbjct: 281 NAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACR 336
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/601 (35%), Positives = 324/601 (53%), Gaps = 66/601 (10%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINN----FPNEP-QDLFVTNHLINMYAKF 55
F ++ Q++ + + NI A H +++ F + P +D+ N +I+ A+
Sbjct: 89 FEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQV 148
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGN---AEECFRLFCSLLQYFFPNEFSLAS 112
G + +AR LF MP++N VSW+A++SGY G+ A ECF Y P
Sbjct: 149 GLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECF--------YAAPMR----- 195
Query: 113 VLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISW 171
V A+I Y K E A ++F+ M R +++W
Sbjct: 196 ------------------------SVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTW 231
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
N+MIA + + E+ L LFR + G+ P+ + + VL C+ L
Sbjct: 232 NAMIAGY-------------VENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSA 278
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+ VH L+ K DT +L+ Y++CG + + ++F ++ D+V WN+++
Sbjct: 279 LQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISG 338
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
YA HG K+AL+LF M ++PD TFV++L AC+HAGLV G + F++M + G+
Sbjct: 339 YAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIET 398
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
+ +HYACMVDLLGR G++ EA LI+ MP +P I+ LLG+CR H LAE AA L
Sbjct: 399 KPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNL 458
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
+L+P + G+VQ++N+Y ++ IR+ MK + V K PG SWIEI + VH F S
Sbjct: 459 LELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSS 518
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+ HP+ +I +KL++L ++K GYVP+ LHD+ EE KE+ L HSEKLA+ F ++
Sbjct: 519 DRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLL 578
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
IR+ KN+R+C DCH+ K S + G+EI+VRD+ RFHHFKD CSC DY
Sbjct: 579 K----VPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDY 634
Query: 589 W 589
W
Sbjct: 635 W 635
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 157/338 (46%), Gaps = 59/338 (17%)
Query: 137 HVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF--RACKLEAQAIELFA 192
+V +N LI Y + C D A +VFE+M+ ++ ++WNS++AAF + E A +LF
Sbjct: 40 NVIASNKLIASYVR-CGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFE-YARQLFE 97
Query: 193 KMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGL----- 229
K+ +A F + + +A W T L A GL
Sbjct: 98 KIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVA-SWNTMISAL-AQVGLMGEAR 155
Query: 230 -----VTERHASAVHSLIAKYGFEDD---------------TVIANALIHAYARCGSISL 269
+ E++ + ++++ Y D + A+I Y + G + L
Sbjct: 156 RLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVEL 215
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++++F +M+ LV+WN+++ Y +G+A++ L+LF M V+P++ + S+L CS+
Sbjct: 216 AERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSN 275
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+Q G +V H ++ + +V + + G + +A +L ++P + D V W+
Sbjct: 276 LSALQLGKQV-HQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK-DVVCWN 333
Query: 387 VLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQM 422
++ +HG + A ++K+ L+P D + FV +
Sbjct: 334 AMISGYAQHGAGKKALRLFDEMKKEGLKP-DWITFVAV 370
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA-NALIH 259
++ R L+R+ +P + + L T +H F ++ VIA N LI
Sbjct: 1 MYCLRLLRRKKRSPLLTSSFVTLSKYVSSHTHQHE-----------FNNNNVIASNKLIA 49
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH-GQAKEALQLFSNMNVQPDSATFV 318
+Y RCG I + +VF+ M V+WNSIL A+A G + A QLF + QP++ ++
Sbjct: 50 SYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP-QPNTVSYN 108
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+L+ H V + F SM + + + M+ L +VG + EA +L MP
Sbjct: 109 IMLACHWHHLGVHDARGFFDSM-----PLKDVASWNTMISALAQVGLMGEARRLFSAMP- 162
Query: 379 EPDSVIWSVLL 389
E + V WS ++
Sbjct: 163 EKNCVSWSAMV 173
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/579 (35%), Positives = 330/579 (56%), Gaps = 33/579 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
DLF++N LI+ Y+ G LD A +F ++ ++++VSW ++ISG+ Q G+ EE +LF +
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM 223
Query: 100 -LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
++ PN ++ VL +C D G+ + +D ++ ++NA+++MY K +
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSL 283
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--------------- 198
++A ++F+ ME ++++SW +MI + A +F M E+
Sbjct: 284 EDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNG 343
Query: 199 ---EALFLFRQLQ-REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
EAL +FR+LQ + P+ T + L ACA L +H I K G + + I
Sbjct: 344 KPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHIT 403
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQ 311
+LI Y++CG + + +VF + D+ W++++ A+HG + A+ LFS M V+
Sbjct: 404 TSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVK 463
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P++ TF +LL ACSH+GLV EG F+ M +GVVP HYACMVD+LGR G + EA +
Sbjct: 464 PNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVE 523
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
LI +MP+ P + +W LLG+CR +G LAE+A ++L + + + +V +SNIY +G
Sbjct: 524 LIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGK 583
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG 491
++ +R+ MK S + K PG S IE+ +HEF G HP I+ KL+E++ ++K
Sbjct: 584 WDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKS 643
Query: 492 MGYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GYV + S L +EEE+ KE L HSEKLA+ + ++ IRI+KN+R+C
Sbjct: 644 TGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRM----EPSQPIRIVKNLRVCG 699
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH+ KL S L ++I++RD RFHHF CSC DYW
Sbjct: 700 DCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 218/482 (45%), Gaps = 73/482 (15%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNF----PNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
L CA N K QLH HM+ P LF L + LD A +FD
Sbjct: 36 LIDKCA---NKKHLKQLHAHMLRTGLFFDPPSATKLFTACAL----SSPSSLDYACKVFD 88
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYL 120
++P+ N+ +W LI +A + +F +L FPN ++ V+ + L
Sbjct: 89 QIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLL 148
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H + +K S + ++++N+LI+ YS D A+ VF + ++++SWNSMI+
Sbjct: 149 AGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISG-- 206
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
F + + EEAL LF++++ E P+ T VL ACA +
Sbjct: 207 -----------FVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWAC 255
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS--------------- 284
I + G + + +++NA++ Y +CGS+ ++++FDKM D+VS
Sbjct: 256 DYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYD 315
Query: 285 ----------------WNSILKAYALHGQAKEALQLFS----NMNVQPDSATFVSLLSAC 324
WN+++ +Y +G+ KEAL +F N N +P+ T S L+AC
Sbjct: 316 AARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ G + G + H ++ G+ ++D+ + G + +A ++ + D +
Sbjct: 376 AQLGAMDLGGWI-HVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR-DVFV 433
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL---SGSFNKARLIRKE 441
WS ++ HG R A +K+++ + + V +N+ C SG ++ RL +
Sbjct: 434 WSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNA--VTFTNLLCACSHSGLVDEGRLFFNQ 491
Query: 442 MK 443
M+
Sbjct: 492 MR 493
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 32/294 (10%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G+++ A +L + M E +D+ +I+ YAK G D AR +FD MP+ ++ +W A
Sbjct: 281 GSLEDARRLFDKM------EEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNA 334
Query: 79 LISGYAQHGNAEECFRLF--CSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKF 132
LIS Y Q+G +E +F L + PNE +LAS L +C L G +H K
Sbjct: 335 LISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQ 394
Query: 133 SLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+ + ++ +LI+MYSK C ++A +VF ++E R+V W++MIA AI+L
Sbjct: 395 GIKLNFHITTSLIDMYSK-CGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDL 453
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFE 248
F+KM Q + P+ TF+ +L AC +GLV E + + YG
Sbjct: 454 FSKM-------------QETKVKPNAVTFTNLLCACSHSGLVDEGRL-FFNQMRPVYGVV 499
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQAKEA 301
+ ++ R G + + ++ +KM S W ++L A ++G + A
Sbjct: 500 PGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELA 553
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/569 (35%), Positives = 320/569 (56%), Gaps = 26/569 (4%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPK--RNVVSWTALISGYAQHGNA-EECFRLFCSL 99
FV + L++MYA + AR +FD +P+ R + W A+I GYAQHG EE LF +
Sbjct: 297 FVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRM 356
Query: 100 LQYF--FPNEFSLASVLISC---DYLHGK-LVHALALKFSLDAHVYVANALINMYSK-SC 152
P+E ++A VL +C + GK VH +K + ++ +V NAL++MY++
Sbjct: 357 EAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGR 416
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
DEA +F ++ R+++SWN++I L ++A +L +M+ A L+ +
Sbjct: 417 MDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDT 476
Query: 213 A-------PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ P+ T +L CA L +H ++ E D + +AL+ YA+CG
Sbjct: 477 SVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCG 536
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLL 321
++L++ VFD++ ++++WN ++ AY +HG EAL LF M P+ TF++ L
Sbjct: 537 CLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAAL 596
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM-PMEP 380
+ACSH+GLV G ++F M ++G P +AC+VD+LGR GR+ EA +I M P E
Sbjct: 597 AACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEH 656
Query: 381 DSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRK 440
WS +LG+CR H +L +AA +L +LEP ++ +V + NIY +G + + +R
Sbjct: 657 QVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRG 716
Query: 441 EMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSL 500
M+ V K PG SWIE++ +H F +G HP+ + ++ L +++ GYVP+TS
Sbjct: 717 MMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSC 776
Query: 501 ALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLAS 560
LHD++E K L +HSEKLA+ F ++ + IR+ KN+R+C DCH K S
Sbjct: 777 VLHDVDEAEKAAMLRYHSEKLAIAFGLLR----APPGATIRVAKNLRVCNDCHEAAKFIS 832
Query: 561 DLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++G+EIV+RD RFHHF+D CSC DYW
Sbjct: 833 RMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 183/399 (45%), Gaps = 49/399 (12%)
Query: 33 NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF--DEMPKRNVVSWTALISGYAQHGNAE 90
+ F ++ ++ F N L++MYA+ G +DDA+ LF ++V+W +IS Q G E
Sbjct: 183 HGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCE 242
Query: 91 ECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALK-FSLDAHVYVANAL 144
E ++ ++ P+ + AS L +C L G+ VHA LK L A+ +VA+AL
Sbjct: 243 EAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASAL 302
Query: 145 INMY-SKSCADEAWKVFENME--FRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEEEA 200
++MY S A +VF+ + R + WN+MI + + ++ +AIELF++M+ E
Sbjct: 303 VDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAE--- 359
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
G AP T + VL ACA AVH + K + + NAL+
Sbjct: 360 ---------AGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDM 410
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ--------- 311
YAR G + + +F + D+VSWN+++ + G EA QL M +
Sbjct: 411 YARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETM 470
Query: 312 --------------PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
P++ T ++LL C+ G ++ H H + L + +V
Sbjct: 471 LEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEI-HGYAVRHALESDLAVGSALV 529
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
D+ + G + A + +P + + W+VL+ + HG
Sbjct: 530 DMYAKCGCLALARAVFDRLPRR-NVITWNVLIMAYGMHG 567
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 196/417 (47%), Gaps = 71/417 (17%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK--RNVVSWTALISG---YAQHGNAEECFRLFCS 98
V+N L+ YA+ G LD A LF P R+ VS+ +LIS + + G+A + R
Sbjct: 87 VSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALR---D 143
Query: 99 LLQYFFPNEFSLASVLISCDYLH------GKLVHALALKFS-LDA--HVYVANALINMYS 149
+L + F+L SVL++C +L G+ HA ALK LD + NAL++MY+
Sbjct: 144 MLADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYA 203
Query: 150 K-SCADEAWKVF--ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
+ D+A ++F ++++WN+MI+ L + EEA+ +
Sbjct: 204 RLGLVDDAQRLFFSSGAGVGDLVTWNTMIS-------------LLVQGGRCEEAVQVLYD 250
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD----TVIANALIHAYA 262
+ G+ PD TF+ L AC+ L VH+ + K +DD + +A+AL+ YA
Sbjct: 251 MVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLK---DDDLAANSFVASALVDMYA 307
Query: 263 RCGSISLSKQVFDKMTYH--DLVSWNSILKAYALH-GQAKEALQLFSNMNVQ----PDSA 315
+S +++VFD + H L WN+++ YA H G +EA++LFS M + P
Sbjct: 308 SNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSET 367
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA------CMVDLLGRVGRILEA 369
T +L AC+ ++VF HG V + D + ++D+ R+GR+ EA
Sbjct: 368 TMAGVLPACAR-------SEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEA 420
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHG----------ETRLAELAATKLKQLEPGDS 416
+ + + D V W+ L+ C G E +L AA+ LE D+
Sbjct: 421 HTIFAMIDLR-DIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDT 476
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/564 (37%), Positives = 320/564 (56%), Gaps = 32/564 (5%)
Query: 39 PQDLFVTNHLI-NMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
PQ+ HLI + + + A +F+++ N+ +W +I G+A+ N LF
Sbjct: 65 PQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFS 124
Query: 98 ------SLL--QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYS 149
S+L + FP F + L+ D G+ +H++ ++ D+ +V N+L++MYS
Sbjct: 125 QMHAASSILPDTHTFPFLFKAVAKLM--DVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS 182
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
A+ A++VFE M +R+ ++WNS+I F M NE AL L+R++
Sbjct: 183 VFGFAESAYQVFEIMSYRDRVAWNSVINGFA-----------LNGMPNE--ALTLYREMG 229
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
EG+ PD T +L AC L VH + K G + +NAL+ Y++CG+
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACS 325
+++VFD+M +VSW S++ A++G EAL+LF + Q P TFV +L ACS
Sbjct: 290 DAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H G++ EG F M E +G++P+++H+ CMVDLL R G++ +A IR MP+ P++VIW
Sbjct: 350 HCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIW 409
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG+C HG L E+A ++++LE S FV +SN+Y + + +RK M
Sbjct: 410 RTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMK 469
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K PG S +E++NRV+EF G + HPQ E + L ++ LK GYVP T L DI
Sbjct: 470 GVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADI 529
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
EEE KE L HH+EK+A+ F ++N + IRIMKN+R+C DCH +KL S + +
Sbjct: 530 EEEEKETALSHHTEKVAIAFMLVNTPP----GTPIRIMKNLRVCADCHLAIKLISKVFER 585
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI+VRD +RFHHFKD CSC DYW
Sbjct: 586 EIIVRDRSRFHHFKDGSCSCKDYW 609
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 321/580 (55%), Gaps = 35/580 (6%)
Query: 41 DLFVTNHLI----NMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
D+F + LI + + +D A +F ++ N+ + A+I G++ N ++ F +
Sbjct: 48 DVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFY 107
Query: 97 C-SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKS 151
S Q P+ + ++ SC LH G H +K + VYV N+L++MY+
Sbjct: 108 VQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATF 167
Query: 152 CADEAWK-VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------- 197
EA +F+ M + +V+SW SMI F C A +LF +M +
Sbjct: 168 GDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYA 227
Query: 198 -----EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
++A+ LF+ LQ +G+ + V+ +CA L H + K G + +
Sbjct: 228 QNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLI 287
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ AL+ YARCGSI + VF+ + D +SW +++ A+HG ++ +L+ F+ M
Sbjct: 288 LGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAG 347
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ P TF ++LSACSH GLV+ G ++F SM +H V P+L+HY CMVDLLGR G++ EA
Sbjct: 348 LTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEA 407
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
E+ + +MP++P++ +W LLG+CR H + E L QL P S +V +SNIY +
Sbjct: 408 ERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANA 467
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
+ K +R+ MK ++K PG S IE++ RVH+F G HP+ + I + EE++ ++
Sbjct: 468 KEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRI 527
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRIC 549
+ GY T+ AL DI+EE KE L+ HSEKLA+ F +M + + IRI+KN+R+C
Sbjct: 528 RAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEA----GTPIRIVKNLRVC 583
Query: 550 VDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH KL S + G+E++VRD NRFHHF+ +CSC DYW
Sbjct: 584 EDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 324/571 (56%), Gaps = 33/571 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFP 105
L++ YAK L DA HLFDE P+R++ +++L++ + + E + +L P
Sbjct: 44 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 103
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ F ++SV L G+ +HA + + V ++L++MY K D+ KVF
Sbjct: 104 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVF 163
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EALF 202
++M +N + W ++++ + + +A++LF M A+
Sbjct: 164 DSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVE 223
Query: 203 LFRQLQREGM-APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
LF +++R+G+ D SIV+ A L +H + GF + ++ NALI Y
Sbjct: 224 LFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMY 283
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
++C I +++VF+ +T+ D++SW +++ A HG+A+EAL L+ M +P+ TFV
Sbjct: 284 SKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 343
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
L+ ACSHAGLVQ+G ++F SM +G+ P+L HY C +DLL R G +LEAE+L+ MP
Sbjct: 344 GLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPY 403
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
EPD W LL +C K+ + + + KL +L P DS ++ +SN+Y ++G ++ +
Sbjct: 404 EPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKV 463
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
RK M G +RK PG SWIE F +G RE I LEE++ +++ GYVP+T
Sbjct: 464 RKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDT 523
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
S +HD+EE KE L+ HSE+LA+ F ++ SVIR++KN+R+CVDCH MKL
Sbjct: 524 SSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPP----GSVIRVVKNLRVCVDCHTVMKL 579
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S++ ++IVVRDS+RFHHF+ CSC+++W
Sbjct: 580 ISEITHRKIVVRDSSRFHHFEGGKCSCSEFW 610
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 158/341 (46%), Gaps = 89/341 (26%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
QLH H + + N D V + L++MY K G DD R +FD M +N V WTAL+SGYA
Sbjct: 126 QLHAHFVVSPYN--GDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYAS 183
Query: 86 HGNAEECFRLFCSL------------------------LQYF---------FPNEFSLAS 112
+G +EE +LF S+ ++ F + F L+
Sbjct: 184 NGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSI 243
Query: 113 VL-ISCD---YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFR 166
V+ S D ++ G+ +H ++ +++ V NALI+MYSK C+D A +VFE + FR
Sbjct: 244 VIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSK-CSDILSAREVFEGITFR 302
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+VISW +M+ EAQ EEAL L+ ++ G P+ TF ++ AC
Sbjct: 303 DVISWTTMVVG------EAQ-------HGRAEEALALYDRMVLAGAKPNEVTFVGLIYAC 349
Query: 227 --AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
AGLV ++ S+ +YG ++ ++ Y DL+S
Sbjct: 350 SHAGLV-QKGRQLFESMKNEYG----------------------ITPRLQHYTCYLDLLS 386
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS 325
+ G EA +L + M +PD AT+ +LLSAC+
Sbjct: 387 RS---------GHLLEAEELMTTMPYEPDEATWGALLSACT 418
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 125 VHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+HA LK L H AL++ Y+KS +A +F+ R++ ++S++ A
Sbjct: 25 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTA------ 78
Query: 184 EAQAIELFAKMKNEEEALFLFR-QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ + E AL + R L + + PD S V A L + R +H+
Sbjct: 79 -------VSHSASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHF 131
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ D V+ ++L+ Y +CGS ++VFD M+ + V W +++ YA +G+++EAL
Sbjct: 132 VVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEAL 191
Query: 303 QLFSNMNVQPDSATF--VSLLSACSHAGLVQEGNKV 336
QLF +M P F +L+S GLV G V
Sbjct: 192 QLFRSM---PGRNLFAWTALIS-----GLVNTGESV 219
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/635 (35%), Positives = 337/635 (53%), Gaps = 75/635 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA ++ Q+H + N D+FV N L++MYAK +++A +F+ + K
Sbjct: 240 ILPACASVFALQHGKQVHGFSVRN--GLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKK 297
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL------------------------------- 99
++VVSW A+++GY+Q G+ + LF +
Sbjct: 298 KDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDV 357
Query: 100 -----LQYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAH-------VYVANA 143
L PN +LAS+L C L+GK HA +K L+ + + V N
Sbjct: 358 FRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNG 417
Query: 144 LINMYSKSCADE-AWKVFENMEFR--NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
LI+MY+K + A +F+++E + NV++W MI + A+ +A
Sbjct: 418 LIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGY-------------AQHGEANDA 464
Query: 201 LFLFRQL--QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANAL 257
L LF Q+ Q+ + P+ T S L ACA L R +H+ + E + + + N L
Sbjct: 465 LKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCL 524
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
I Y++ G I ++ VFD M ++VSW S++ Y +HG+ +EAL LF M D
Sbjct: 525 IDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDG 584
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
TF+ +L ACSH+G+V +G FH M++ G+ P +HYACMVDLLGR GR+ EA +LI+
Sbjct: 585 ITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIK 644
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
M MEP +V+W LL + R H L E AA+KL +L + + +SN+Y + +
Sbjct: 645 NMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKD 704
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
IR MK + +RK PG SWI+ + F G + HP+ E I+ L +LI ++K MGY
Sbjct: 705 VARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGY 764
Query: 495 VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHN 554
VP+TS ALHD+++E K + L+ HSEKLA+ + I+ IRI KN+RIC DCH+
Sbjct: 765 VPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTA----PGQPIRIHKNLRICGDCHS 820
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ S ++ EIV+RDS+RFHHFK CSC YW
Sbjct: 821 ALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 216/435 (49%), Gaps = 51/435 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ AC +++ +H + N ++F+ N ++ MY + G LDDA +FDE+ +
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCAN--GLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLE 190
Query: 71 R---NVVSWTALISGYAQHGNAEECFRLFCSLLQYFF----PNEFSLASVLISCDYL--- 120
R ++VSW ++++ Y Q G + R+ + ++ P+ +L ++L +C +
Sbjct: 191 RKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFAL 250
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
HGK VH +++ L V+V NAL++MY+K S +EA KVFE ++ ++V+SWN+M+ +
Sbjct: 251 QHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGY 310
Query: 179 RACKLEAQAIELFAKMKNEE----------------------EALFLFRQLQREGMAPDW 216
A+ LF M+ E+ EAL +FRQ+Q G+ P+
Sbjct: 311 SQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNV 370
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGF-------EDDTVIANALIHAYARCGSISL 269
T + +L CA + + H+ + K EDD ++ N LI YA+C S +
Sbjct: 371 VTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRV 430
Query: 270 SKQVFDKMTYHD--LVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLS 322
++ +FD + D +V+W ++ YA HG+A +AL+LF+ + +++P++ T L
Sbjct: 431 ARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALM 490
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC+ G ++ G ++ L N L C++D+ + G I A + M + +
Sbjct: 491 ACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR-NV 549
Query: 383 VIWSVLLGSCRKHGE 397
V W+ L+ HG
Sbjct: 550 VSWTSLMTGYGMHGR 564
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 161/333 (48%), Gaps = 63/333 (18%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPN-----EPQDLFVTNHLINMYAKFGYLDDARH 63
A+L CA G + Q H ++I N N + DL V N LI+MYAK AR
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433
Query: 64 LFD--EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY---FFPNEFSLASVLISCD 118
+FD E +NVV+WT +I GYAQHG A + +LF + + PN F+L+ L++C
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493
Query: 119 YLH----GKLVHALALKFSLDAHV-YVANALINMYSKSC-ADEAWKVFENMEFRNVISWN 172
L G+ +HA AL+ ++ V YV N LI+MYSKS D A VF+NM+ RNV+SW
Sbjct: 494 RLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWT 553
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLV 230
S++ + EEAL LF Q+Q+ G A D TF +VL AC +G+V
Sbjct: 554 SLMTG-------------YGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMV 600
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
++ H ++ +G ++ R G ++
Sbjct: 601 -DQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLN---------------------- 637
Query: 291 AYALHGQAKEALQLFSNMNVQPDSATFVSLLSA 323
EA++L NM+++P + +V+LLSA
Sbjct: 638 ---------EAMELIKNMSMEPTAVVWVALLSA 661
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 153/312 (49%), Gaps = 23/312 (7%)
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HGKLVH 126
V W ALI + G ++ +C + + + P+ ++ VL +C + HG VH
Sbjct: 91 TVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVH 150
Query: 127 ALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENM---EFRNVISWNSMIAAFRACK 182
A+ L ++V++ N+++ MY + A D+A ++F+ + + +++SWNS++AA+
Sbjct: 151 AIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGG 210
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A+ + +M N + PD T +L ACA + +H VH
Sbjct: 211 QSRTALRIAFRMGNHYSL----------KLRPDAITLVNILPACASVFALQHGKQVHGFS 260
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ G DD + NAL+ YA+C ++ + +VF+ + D+VSWN+++ Y+ G AL
Sbjct: 261 VRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSAL 320
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
LF M +++ D T+ ++++ + G E VF M + +G+ P + A ++
Sbjct: 321 SLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGLEPNVVTLASLLSG 379
Query: 360 LGRVGRILEAEK 371
VG +L ++
Sbjct: 380 CASVGALLYGKQ 391
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/597 (36%), Positives = 333/597 (55%), Gaps = 36/597 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+T AC N+ +L+E +I + E D V + LI MY + +++A FD
Sbjct: 137 STALLACTAARNLALGRKLNE-LIASEALEI-DSHVESSLITMYGRCREIEEAERAFDRS 194
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL----LQYFFPNEFSLASVLISC-DYLHGK 123
P+++VV WTA+IS YA + L + ++ P SL S D +G
Sbjct: 195 PEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGV 254
Query: 124 LVHALALKFSLD-AHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
H A LD + VA L+N+Y K C D+A +V + M R +SW +MIAA+
Sbjct: 255 AFHQRAAAIGLDRSSTVVAGTLVNLYGK-CGRVDDARRVLDAMPVRTSVSWTAMIAAY-- 311
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ N EA+ LF+ + EG P T V+ +CA L T +H+
Sbjct: 312 -----------AQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHA 360
Query: 241 LI-AKYGFEDDTVIANALIHAYARCGSISLSKQVFD--KMTYHDLVSWNSILKAYALHGQ 297
I + F ++ NA+I Y +CG++ L+++VF+ + +V+W ++++AYA +G
Sbjct: 361 RIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGV 420
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+EA++LF M +P+ TF+S+L ACSH G +++ + F SM + GV P DHY
Sbjct: 421 GEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHY 480
Query: 354 ACMVDLLGRVGRILEAEKLI-REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
C+VDLLGR GR+ EAEKL+ R E D V W L +C+ +G+ ++ AA ++ +LE
Sbjct: 481 CCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELE 540
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
P + G V +SN+Y G IR EMK S V+K+ G SWIEI NRVHEF H
Sbjct: 541 PENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSH 600
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
P++ I+ +LE L ++K GYVP+T + L D++EE K + L +HSE+LA+ I++
Sbjct: 601 PRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPP 660
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +R++KN+R+C DCH K S ++G++I+VRD++RFHHFKD +CSC DYW
Sbjct: 661 ----GTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 196/407 (48%), Gaps = 35/407 (8%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S YA+L C + + +LH + + ++ F+ N L++ Y+K G L A+
Sbjct: 34 SINDYASLLWQCR---GLDEVRKLHAQIAARKLD--RNTFLGNVLVDAYSKHGSLHGAQL 88
Query: 64 LFDEMPKRNVVSWTALISGYAQHG---NAEECFRLFCSLLQYFFPNEFSLASVLISCDYL 120
F + N SW L++ YAQ+G A F CS Q PN +L++ L++C
Sbjct: 89 AFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCS--QGVRPNAVTLSTALLACTAA 146
Query: 121 H----GKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSM 174
G+ ++ L +L+ +V ++LI MY + C +EA + F+ ++V+ W +M
Sbjct: 147 RNLALGRKLNELIASEALEIDSHVESSLITMYGR-CREIEEAERAFDRSPEKDVVCWTAM 205
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+A +A AL L R++ EG+ T+ +L ACA + R+
Sbjct: 206 ISA-------------YAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRN 252
Query: 235 ASAVHSLIAKYGFE-DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
A H A G + TV+A L++ Y +CG + +++V D M VSW +++ AYA
Sbjct: 253 GVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYA 312
Query: 294 LHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G A EA+ LF M++ +P T +S++ +C+ G + G ++ + + L
Sbjct: 313 QNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSL 372
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRKHG 396
++ + G+ G + A ++ +P+ SV+ W+ ++ + ++G
Sbjct: 373 MLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNG 419
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 29/352 (8%)
Query: 111 ASVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNV 168
AS+L C L + +HA LD + ++ N L++ YSK A F + N
Sbjct: 39 ASLLWQCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNA 98
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
SWN ++AA+ A+ + A LF + +G+ P+ T S L AC
Sbjct: 99 HSWNILMAAY-------------AQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTA 145
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
++ LIA E D+ + ++LI Y RC I +++ FD+ D+V W ++
Sbjct: 146 ARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAM 205
Query: 289 LKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ AYA + + AL+L M+ ++ T+VSLL AC+ ++ G FH G
Sbjct: 206 ISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNG-VAFHQRAAAIG 264
Query: 346 VVPQLDHYA-CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA--E 402
+ A +V+L G+ GR+ +A +++ MP+ SV W+ ++ + ++G A
Sbjct: 265 LDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRT-SVSWTAMIAAYAQNGNAAEAINL 323
Query: 403 LAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
L+ EP D + + + + + G+ + + I +R+R P S
Sbjct: 324 FQCMDLEGAEPSD-ITLISVVDSCAVLGTLSLGKRIH-----ARIRSSPSFS 369
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 312/564 (55%), Gaps = 32/564 (5%)
Query: 40 QDLFVTNHLIN---MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
DL V IN + + A HLFD++P+ ++V + + GYA+ F LF
Sbjct: 50 SDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLF 109
Query: 97 CSLL-QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS 151
+L FP++++ S+L +C G+ +H LA+K L +VYV LINMY+ +
Sbjct: 110 TQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYT-A 168
Query: 152 C--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C D A +VF+ + V+++N+MI + A+ EAL LFR+LQ
Sbjct: 169 CNEMDCARRVFDKIWEPCVVTYNAMITGY-------------ARGSRPNEALSLFRELQA 215
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ P T VL +CA L +H + K GF + ALI YA+CGS+
Sbjct: 216 RNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDD 275
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ VF+ M D +W++++ AYA+HG +A+ LF M +PD TF+ LL ACSH
Sbjct: 276 AVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSH 335
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
GLV+EG + F+ M + +GV+P + HY CMVDLLGR GR+ EA + I +P+ P ++W
Sbjct: 336 TGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWR 395
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL +C HG L + ++ +L+ ++ +SN+ +G + +RK M
Sbjct: 396 TLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERG 455
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH-DI 505
V K PG S +E+ N VHEF SG H + + L+EL+ +LK +GYVP TSL H D+
Sbjct: 456 VVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADM 515
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
E+E KE L +HSEKLA+ F ++N + IR++KN+R+C DCH+ KL S + +
Sbjct: 516 EDEEKEVTLRYHSEKLAITFGLLNTPP----GTTIRVVKNLRVCGDCHSAAKLISLIFDR 571
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
+I++RD RFHHFKD CSC DYW
Sbjct: 572 QIILRDVQRFHHFKDGKCSCEDYW 595
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 166/369 (44%), Gaps = 63/369 (17%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +L ACA +++ QLH I +E +++V LINMY +D AR +FD+
Sbjct: 124 FPSLLKACASCKALEEGRQLHCLAIKLGLSE--NVYVCPTLINMYTACNEMDCARRVFDK 181
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----G 122
+ + VV++ A+I+GYA+ E LF L + P + ++ SVL SC L G
Sbjct: 182 IWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLG 241
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +H K + V V ALI+MY+K + D+A VFENM R+ +W++MI A
Sbjct: 242 KWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMA---- 297
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVH 239
+A + +A+ LF+++++ G PD TF +L AC+ GLV E
Sbjct: 298 ---------YAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEE------- 341
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
YG D + + H + ++ G+ +
Sbjct: 342 GFEYFYGMRDKYGVIPGIKH-------------------------YGCMVDLLGRAGRLE 376
Query: 300 EALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE---NHGVVPQLDHYACM 356
EA + + ++P + +LLSAC G V+ G +V + E +HG Y +
Sbjct: 377 EAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHG-----GDYIIL 431
Query: 357 VDLLGRVGR 365
+L R GR
Sbjct: 432 SNLCARAGR 440
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/609 (34%), Positives = 335/609 (55%), Gaps = 64/609 (10%)
Query: 40 QDLFVTNHLINMYAK--FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
QD +V+ L+ YA F D A +F +P NV W +I G ++ + +
Sbjct: 63 QDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYG 122
Query: 98 SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SC 152
++ PN+F+ ++ +C G+ +H +K + + V++ +A I MY+
Sbjct: 123 RMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGR 182
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM------------------ 194
++A K+F + E +V+ WN+MI + C + A LFA+M
Sbjct: 183 LEDARKMFYSGE-SDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKG 241
Query: 195 ---------------KNE----------------EEALFLFRQLQREGMAPDWCTFSIVL 223
++E +EAL +F+Q+QRE P S VL
Sbjct: 242 GNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVL 301
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
AC+ + VH+ + + + D V+ AL+ YA+CG + + +VF++M ++
Sbjct: 302 AACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIF 361
Query: 284 SWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+WN+++ A+HG+A++AL+LFS + ++P+ T V +L+AC+HAG V +G ++F +M
Sbjct: 362 TWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM 421
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
E +GV P+L+HY CMVDLLGR G EAE LI MPM+P++ +W LLG+CR HG L
Sbjct: 422 REFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDL 481
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
AE L +LEP +S +V +SNIY G F+ IRK MK ++ PG+S +++
Sbjct: 482 AERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNG 541
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEK 520
VHEF G HPQ + I++KL+ + +L+ G+ P+TS L DI+EE KE + +HSEK
Sbjct: 542 TVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEK 601
Query: 521 LALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
LA+ F ++N +L +R I I+KN+R+C DCH+ KL S + +EI+VRD R+HHFK+
Sbjct: 602 LAIAFGLIN--TLPGKR--IHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKN 657
Query: 581 RICSCNDYW 589
CSC D+W
Sbjct: 658 GTCSCKDFW 666
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 184/432 (42%), Gaps = 99/432 (22%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH---- 63
Y TLF AC++ +++ Q+H H++ + D+ + + I MYA FG L+DAR
Sbjct: 135 YPTLFKACSVAQAVQEGRQIHGHVVKH--GIGSDVHIKSAGIQMYASFGRLEDARKMFYS 192
Query: 64 --------------------------LFDEMPKRNVVSWTALISGYAQHGNAEECFRLF- 96
LF +MP +N+ SW +I+G A+ GN + +LF
Sbjct: 193 GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFD 252
Query: 97 ----------CSLLQYFF---------------------PNEFSLASVLISCDYL----H 121
S++ + P F L+SVL +C +
Sbjct: 253 EMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQ 312
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFR 179
G+ VHA + S+ + AL++MY+K C D W+VFE M+ R + +WN+MI
Sbjct: 313 GRWVHAYLKRNSIKLDAVLGTALLDMYAK-CGRLDMGWEVFEEMKEREIFTWNAMIGG-- 369
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASA 237
A E+AL LF +LQ M P+ T VL AC AG V ++
Sbjct: 370 -----------LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV-DKGLRI 417
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHG 296
++ YG + + ++ R G S ++ + + M + W ++L A +HG
Sbjct: 418 FQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477
Query: 297 Q---AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV--VPQLD 351
A+ ++ + Q +S +V L + + G + +K+ +++N G+ VP +
Sbjct: 478 NFDLAERVGKILLELEPQ-NSGRYVLLSNIYAKVGRFDDVSKI-RKLMKNRGIKTVPGVS 535
Query: 352 HYACMVDLLGRV 363
+VDL G V
Sbjct: 536 ----IVDLNGTV 543
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 138/353 (39%), Gaps = 83/353 (23%)
Query: 125 VHALALKFSLDAHVYVANALINMYSK---SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+HAL L+ YV+ AL+ Y+ S D A KVF ++ NV WN +I
Sbjct: 52 LHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+AI + +M + P+ T+ + KAC+ + +H
Sbjct: 112 NKLFKAIYFYGRMVIDAR--------------PNKFTYPTLFKACSVAQAVQEGRQIHGH 157
Query: 242 IAKYGF------------------------------EDDTVIANALIHAYARCGSISLSK 271
+ K+G E D V N +I Y +CG + +K
Sbjct: 158 VVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAK 217
Query: 272 -------------------------------QVFDKMTYHDLVSWNSILKAYALHGQAKE 300
++FD+M+ D +SW+S++ Y G+ KE
Sbjct: 218 GLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKE 277
Query: 301 ALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL++F M +P S+L+ACS+ G + +G V H+ L+ + + ++
Sbjct: 278 ALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWV-HAYLKRNSIKLDAVLGTALL 336
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
D+ + GR+ ++ EM E + W+ ++G HG A +KL++
Sbjct: 337 DMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I +++ AC+ G I Q +H ++ N + D + L++MYAK G LD +F+
Sbjct: 296 ILSSVLAACSNIGAIDQGRWVHAYLKRN--SIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG--- 122
EM +R + +W A+I G A HG AE+ LF L + PN +L VL +C +
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413
Query: 123 --KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAAF 178
++ + + +D + ++++ +S EA + +M + N W +++ A
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGAC 473
Query: 179 R 179
R
Sbjct: 474 R 474
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 117/259 (45%), Gaps = 19/259 (7%)
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC--GSISLSKQVFDKMTYHDLVSWN 286
+ + ++ + +H+L+ + G D ++ AL+ YA + + +VF + ++ WN
Sbjct: 43 ITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWN 102
Query: 287 SILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++K + + +A+ + M + +P+ T+ +L ACS A VQEG ++ H + H
Sbjct: 103 IVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQI-HGHVVKH 161
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
G+ + + + + GR+ +A K+ E D V W+ ++ K G + E A
Sbjct: 162 GIGSDVHIKSAGIQMYASFGRLEDARKMF--YSGESDVVCWNTMIDGYLKCG---VLEAA 216
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
Q+ + + M N G+ AR + EM + +SW + V
Sbjct: 217 KGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMS-----ERDEISW---SSMVDG 268
Query: 465 FASGGKRHPQREAIFKKLE 483
+ S G R+ + IF++++
Sbjct: 269 YISAG-RYKEALEIFQQMQ 286
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 331/593 (55%), Gaps = 34/593 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L AC G+ + + +H + I + +LFV+N LI++YA+FG L D + +FD M
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKH--GLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLF----CSLLQYFFPNEFSLASVLISC-DYLHGKL 124
R+++SW ++I Y + LF S +Q SLAS+L D +
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRS 369
Query: 125 VHALALK---FSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
V L+ F D + + NA++ MY+K D A VF + +VISWN++I+ +
Sbjct: 370 VQGFTLRKGWFLED--ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
++AIE++ M+ E E +A + T+ VL AC+ R +H
Sbjct: 428 NGFASEAIEMYNIMEEEGE------------IAANQGTWVSVLPACSQAGALRQGMKLHG 475
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G D + +L Y +CG + + +F ++ + V WN+++ + HG ++
Sbjct: 476 RLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEK 535
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ LF M V+PD TFV+LLSACSH+GLV EG F M ++G+ P L HY CMV
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMV 595
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+ GR G++ A K I+ M ++PD+ IW LL +CR HG L ++A+ L ++EP + +
Sbjct: 596 DMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP-EHV 654
Query: 418 GF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
G+ V +SN+Y +G + IR G +RK PG S +E++N+V F +G + HP E
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
++++L L +LK +GYVP+ L D+E++ KE L HSE+LA+ FA++ +
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPA---- 770
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ IRI KN+R+C DCH+ K S + +EI+VRDSNRFHHFK+ +CSC DYW
Sbjct: 771 KTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 193/395 (48%), Gaps = 32/395 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TLF C N++ A LH ++ + Q++ ++ L+N+Y G + ARH FD +
Sbjct: 59 TLFRYCT---NLQSAKCLHARLV--VSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 70 KRNVVSWTALISGYAQHGNAEE---CFRLFCSLLQYFFPNEFSLASVLISC-DYLHGKLV 125
R+V +W +ISGY + GN+ E CF LF L P+ + SVL +C + G +
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFM-LSSGLTPDYRTFPSVLKACRTVIDGNKI 172
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H LALKF VYVA +LI++YS+ A +F+ M R++ SWN+MI+ +
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY------ 226
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ N +EAL L L+ A D T +L AC +HS K
Sbjct: 227 -------CQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
+G E + ++N LI YA G + ++VFD+M DL+SWNSI+KAY L+ Q A+ L
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M +QPD T +SL S S G ++ V L + + +V +
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++G + A + +P D + W+ ++ ++G
Sbjct: 396 KLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNG 429
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 14/182 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC+ G ++Q M+LH ++ N D+FV L +MY K G L+DA LF +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQ 511
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV- 125
+P+ N V W LI+ + HG+ E+ LF +L + P+ + ++L +C H LV
Sbjct: 512 IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS--HSGLVD 569
Query: 126 ------HALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVIS-WNSMIAA 177
+ + + + +++MY ++ E A K ++M + S W ++++A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 178 FR 179
R
Sbjct: 630 CR 631
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 317/558 (56%), Gaps = 29/558 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
+ N L++MY K G + +R + +MP+R+VV+W ALI GYA++ + ++ F +L ++
Sbjct: 499 IIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVE 558
Query: 102 YFFPNEFSLASVLISC----DYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD-- 154
N ++ SVL +C D L GK +HA + ++ +V N+LI MY+K C D
Sbjct: 559 GVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK-CGDLS 617
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ +F ++ R++I+WN+++AA A + EE L L +++ G++
Sbjct: 618 SSQDLFNGLDNRSIITWNAILAAN-------------AHHGHGEEVLKLVSKMRSFGLSL 664
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D +FS L A A L +H L K GFE D I NA Y++CG I ++
Sbjct: 665 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKML 724
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
L SWN ++ A HG +E + F M ++P TFVSLL+ACSH GLV
Sbjct: 725 PPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 784
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + + ++ G+ P ++H C++DLLGR GR+ EAE I +MPM+P+ ++W LL S
Sbjct: 785 QGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 844
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ H + AA L +LEP D FV SN++ +G + +RK+M ++K
Sbjct: 845 CKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 904
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
SW++++++V F G + HPQ I+ KLE++ +K GYV +TS AL D +EE KE
Sbjct: 905 ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKE 964
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L++HSE+LAL +A+M+ E S +RI KN+RIC DCH+ K S ++G+ IV+RD
Sbjct: 965 HNLWNHSERLALAYALMST----PEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRD 1020
Query: 572 SNRFHHFKDRICSCNDYW 589
RFHHF+ +CSC DYW
Sbjct: 1021 QYRFHHFESGLCSCKDYW 1038
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 206/418 (49%), Gaps = 52/418 (12%)
Query: 45 TNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG---NAEECFRLFCSLLQ 101
TN LINMY KFG + AR+LFD+MP RN VSW ++SG + G E F+ C L
Sbjct: 96 TNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDL-- 153
Query: 102 YFFPNEFSLASVLISCD-----YLHGKLVHALALKFSLDAHVYVANALINMYSK----SC 152
P+ F +AS++ +C + G VH K L + VYV+ A++++Y SC
Sbjct: 154 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 213
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+ KVFE M RNV+SW S++ + + EE + +++ ++ EG+
Sbjct: 214 SR---KVFEEMPDRNVVSWTSLMVGY-------------SDKGEPEEVIDIYKSMRGEGV 257
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ + S+V+ +C L E + + K G E + N+LI + G++ +
Sbjct: 258 ECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANY 317
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGL 329
+F++++ D +SWNSI+ AYA +G +E+ ++F+ M + +S T +LLS
Sbjct: 318 IFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDH 377
Query: 330 VQEGNKVFHSMLENHGVVPQL--DHYACMVDLLGRV----GRILEAEKLIREMPMEPDSV 383
+ G + HG+V ++ D C+ + L R+ GR EA+ + ++MP + D +
Sbjct: 378 QKWGRGI-------HGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTK-DLI 429
Query: 384 IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY--CLSGS-FNKARLI 438
W+ L+ S G R + + G S+ +V ++ C S F+K R++
Sbjct: 430 SWNSLMASFVNDG--RSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRIL 485
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 203/398 (51%), Gaps = 27/398 (6%)
Query: 4 STQIYATLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
S+ + A+L AC G++ ++ +Q+H + + D++V+ ++++Y +G + +R
Sbjct: 158 SSFVIASLVTACGRSGSMFREGVQVHGFVAKS--GLLSDVYVSTAILHLYGVYGLVSCSR 215
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH 121
+F+EMP RNVVSWT+L+ GY+ G EE ++ S+ + NE S++ V+ SC L
Sbjct: 216 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLK 275
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
G+ + +K L++ + V N+LI+M+ D A +F + R+ ISWNS++A
Sbjct: 276 DESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVA 335
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A +A+ + EE+ +F ++R + T S +L + ++
Sbjct: 336 A-------------YAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGR 382
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H L+ K GF+ + N L+ YA G + VF +M DL+SWNS++ ++ G
Sbjct: 383 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDG 442
Query: 297 QAKEALQLFSNMNVQPDS---ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
++ +AL + +M S TF S L+AC +G ++ H ++ G+
Sbjct: 443 RSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKG-RILHGLVVVSGLFDNQIIG 501
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+V + G++G + + +++ +MP D V W+ L+G
Sbjct: 502 NALVSMYGKIGGMSTSRRVLLQMPRR-DVVAWNALIGG 538
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 187/365 (51%), Gaps = 25/365 (6%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V N LI+M+ G +D A ++F+++ +R+ +SW ++++ YAQ+G+ EE R+F + +
Sbjct: 296 LAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRR 355
Query: 102 YFFPNEFSLASVLISC--DYLH---GKLVHALALKFSLDAHVYVANALINMYSKSC-ADE 155
+ + S L+S D H G+ +H L +K D+ V V N L+ MY+ + ++E
Sbjct: 356 FHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEE 415
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A VF+ M +++ISWNS++A+F +AL + + R G + +
Sbjct: 416 ADLVFKQMPTKDLISWNSLMASF-------------VNDGRSLDALGILCSMIRTGKSVN 462
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+ TF+ L AC +H L+ G D+ +I NAL+ Y + G +S S++V
Sbjct: 463 YVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLL 522
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA---TFVSLLSACSHAGLVQE 332
+M D+V+WN+++ YA + +AL F + V+ SA T VS+LSAC G + E
Sbjct: 523 QMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLE 582
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGS 391
K H+ + + G ++ + + G + ++ L ++ S+I W+ +L +
Sbjct: 583 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN--GLDNRSIITWNAILAA 640
Query: 392 CRKHG 396
HG
Sbjct: 641 NAHHG 645
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 143/283 (50%), Gaps = 26/283 (9%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +HAL +K + V N LINMY+K A +F+ M RN +SWN+M++
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE-RHASAVH 239
L + +E F KM + G+ P + ++ AC + R VH
Sbjct: 137 VGLYLEGMEFFQKMCD-------------LGIKPSSFVIASLVTACGRSGSMFREGVQVH 183
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+AK G D ++ A++H Y G +S S++VF++M ++VSW S++ Y+ G+ +
Sbjct: 184 GFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 243
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE---GNKVFHSMLENHGVVPQLDHY 353
E + ++ +M V+ + + ++S+C GL+++ G ++ ++++ G+ +L
Sbjct: 244 EVIDIYKSMRGEGVECNENSMSLVISSC---GLLKDESLGRQIIGQVIKS-GLESKLAVE 299
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ + G +G + A + ++ E D++ W+ ++ + ++G
Sbjct: 300 NSLISMFGNMGNVDYANYIFNQIS-ERDTISWNSIVAAYAQNG 341
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 156/329 (47%), Gaps = 39/329 (11%)
Query: 9 ATLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ AC + G++ ++ LH ++++ D V N LI MYAK G L ++ LF+
Sbjct: 568 VSVLSACLVPGDLLERGKPLHAYIVS--AGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 625
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFC-------SLLQYFFPNEFSLASVLISCDYL 120
+ R++++W A+++ A HG+ EE +L SL Q+ F S A+ L +
Sbjct: 626 LDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLE-- 683
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G+ +H LA+K + ++ NA +MYSK C + E K+ R++ SWN +I+A
Sbjct: 684 EGQQLHGLAVKLGFELDCFIFNAAADMYSK-CGEIGEVVKMLPPSVNRSLPSWNILISA- 741
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
+ EE F ++ G+ P TF +L AC+ GLV +
Sbjct: 742 ------------LGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQ--GL 787
Query: 237 AVHSLIAK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYA 293
A + +IAK +G E +I R G ++ ++ KM +DLV W S+L +
Sbjct: 788 AYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLASCK 846
Query: 294 LH---GQAKEALQLFSNMNVQPDSATFVS 319
+H + ++A + S + + DS +S
Sbjct: 847 IHRDLDRGRKAAENLSKLEPEDDSVFVLS 875
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 6/173 (3%)
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ E A+H+L K + N LI+ Y + G + ++ +FDKM + VSWN++
Sbjct: 71 ITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTM 130
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG-LVQEGNKVFHSMLENH 344
+ G E ++ F M ++P S SL++AC +G + +EG +V H +
Sbjct: 131 MSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV-HGFVAKS 189
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
G++ + ++ L G G + + K+ EMP + + V W+ L+ GE
Sbjct: 190 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYSDKGE 241
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/583 (36%), Positives = 330/583 (56%), Gaps = 43/583 (7%)
Query: 23 QAMQLHEHMINN----FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
+ Q+H H+I + P V ++LIN Y+K + +F+E +++ +W++
Sbjct: 72 KGQQIHAHIIKSGLQVIP------LVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSS 125
Query: 79 LISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLISCDYLHGKLVHALALK 131
+IS +AQ+ + FC ++ + FP+ ++L CD GK VH L +K
Sbjct: 126 VISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDV--GKSVHCLVIK 183
Query: 132 FSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
D V+V ++L++MY+K C D EA VF+ M RNV+SW+ MI +
Sbjct: 184 TGYDVDVFVGSSLVDMYAK-CGDIKEARNVFDEMPHRNVVSWSGMIYGY----------- 231
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
++ EEA+ LF++ EG+ + T S V++ C +H L K ++
Sbjct: 232 --TQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDL 289
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ ++LI Y++CG I + +VFD++ +L WN++L A A H KEA LF+ M
Sbjct: 290 SGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKME 349
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
++P+ TF+ +L ACSHAGLV+EG K F ++++ + + P HYA MVDLLGR G++
Sbjct: 350 NAGMRPNFITFLCVLYACSHAGLVEEGKKYF-ALMKKYEIEPGTQHYASMVDLLGRAGKL 408
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
EA +I+ MP EP +W + CR HG T LA AA K+ +L S V +SN Y
Sbjct: 409 QEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAY 468
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI 486
+G + A RK ++ V+K GLSWIE NRVH+FA+G + H + + I++KLE+L
Sbjct: 469 AAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLG 528
Query: 487 GQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNI 546
+++ GYV +TS L ++ E K + + +HSE+LA+ F +++ L R IRIMKN+
Sbjct: 529 EEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISI-PLGRP---IRIMKNL 584
Query: 547 RICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+C DCHN +K S L G+ I+VRD+NRFH F+D CSC DYW
Sbjct: 585 RVCGDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 159/322 (49%), Gaps = 28/322 (8%)
Query: 96 FCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CAD 154
FCS +Y + L+ S L G+ +HA +K L V + LIN YSK+
Sbjct: 48 FCSEKKYGHICDLLLSQTR-SRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPL 106
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ +VFE E ++ +W+S+I++F + AI+ F +M E + P
Sbjct: 107 LSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGEN-------------LCP 153
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D F KACA L +VH L+ K G++ D + ++L+ YA+CG I ++ VF
Sbjct: 154 DDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVF 213
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D+M + ++VSW+ ++ Y G+ +EA++LF + + T S++ C A L++
Sbjct: 214 DEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLE 273
Query: 332 EGNKV----FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G ++ F + + G V + ++ L + G I A ++ E+P++ + +W+
Sbjct: 274 LGKQIHGLCFKTSYDLSGFVG-----SSLISLYSKCGLIEGAYRVFDEVPIK-NLGMWNA 327
Query: 388 LLGSCRKHGETRLAELAATKLK 409
+L +C +H T+ A TK++
Sbjct: 328 MLIACAQHAHTKEAFDLFTKME 349
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 319/581 (54%), Gaps = 27/581 (4%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH-----LFDEMPKRN 72
H N+K LH +I N ++ L + ++ D AR+ L +P +
Sbjct: 6 HSNMKSVYNLHATLIKNAQHD-NPLSLRTFILRCANSSSPPDTARYAAAVLLRFPIPG-D 63
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKF 132
+ A+I A H LF + + P + +++ L+ +H L LK
Sbjct: 64 PFPYNAVIRHVALHA-PSLALALFSHMHRTNVPFDHFTFPLILKSSKLNPHCIHTLVLKL 122
Query: 133 SLDAHVYVANALINMYSKSCADEA-WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
+++YV NALIN Y S + A K+F+ M R++ISW+S+I+ F L +A+ LF
Sbjct: 123 GFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLF 182
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+M QL+ + PD V+ A + L VH+ I++ G
Sbjct: 183 QQM-----------QLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTV 231
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ +ALI Y+RCG I S +VFD+M + ++V+W +++ A+HG+ +EAL+ F +M
Sbjct: 232 SLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVES 291
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
++PD F+ +L ACSH GLV+EG +VF SM +G+ P L+HY CMVDLLGR G +LE
Sbjct: 292 GLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLE 351
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A + M + P+SVIW LLG+C H LAE A ++K+L+P +V +SN Y
Sbjct: 352 AFDFVEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGG 411
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
G++ K +R M+ S++ K PGLS + I+ HEF SG HPQ E I + L +I
Sbjct: 412 VGNWVKKEGVRNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDT 471
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
+K GY P T LHDI+EE KE L +HSEKLA+ F ++ R+R IR++KN+RI
Sbjct: 472 VKLGGYTPSTKNVLHDIQEEEKEHSLGYHSEKLAVAFVLLYH----RDRKTIRVIKNLRI 527
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH+FMK S ++IV+RD +RFHHF+ CSC D+W
Sbjct: 528 CYDCHSFMKHVSGFFDRDIVIRDRSRFHHFRKGSCSCRDFW 568
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/583 (37%), Positives = 329/583 (56%), Gaps = 31/583 (5%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++ A H +++ + D F TNHLIN Y + +D A+ LFDEMP RNVVSWT+L
Sbjct: 39 DLTSATSTHSNVVKS--GLSNDTFATNHLINCYLRLFTIDHAQKLFDEMPHRNVVSWTSL 96
Query: 80 ISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
++GY G LF + PNEF+ A+++ +C L G+ +HAL L
Sbjct: 97 MAGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIGRRIHALVEVSGL 156
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
+++ ++LI+MY K + DEA +F++M RNV+SW SMI + A++LF +
Sbjct: 157 GSNLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKE 216
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
F +L + P+ + ACA L + H ++ + G E VI
Sbjct: 217 --------FNHSRLDK----PNHFMLCSAVSACASLGSLGSGKITHGVVIRLGHEASDVI 264
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
A+AL+ YA+CG ++ S ++F ++ ++ + S++ A +G +LQLF M +
Sbjct: 265 ASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVRRI 324
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+P+ TFV +L ACSH+GLV +G ++ SM +GV P HY C+ D+LGRVGRI EA
Sbjct: 325 KPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAY 384
Query: 371 KLIREMPMEPD--SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
+L + + +E D +++W LL + R +G +A A+ +L + + +V +SN Y L
Sbjct: 385 QLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASNRLIESNQQVAGAYVTLSNAYAL 444
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG-KRHPQREAIFKKLEELIG 487
+G + A +R EMK + V K PG SWIEI+ + F +G ++ Q I L EL
Sbjct: 445 AGDWENAHNLRSEMKHTGVYKEPGSSWIEIKESTYLFHAGDISKYTQGREILSLLRELEE 504
Query: 488 QLKGMGYVPET-SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNI 546
++KG GYV T L D+EEE KEE + HSEKLAL F ++N + IRIMKN+
Sbjct: 505 RMKGRGYVGGTKGLVFVDVEEEAKEEIVSMHSEKLALAFGLINT----PKGVTIRIMKNL 560
Query: 547 RICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+C DCH KL SD++ +E+VVRD NRFHHFK+ +C+C D+W
Sbjct: 561 RMCRDCHGAFKLISDIVERELVVRDVNRFHHFKNGLCTCGDFW 603
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 166/335 (49%), Gaps = 30/335 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ATL +AC++ N++ ++H + +L + LI+MY K ++D+AR +FD
Sbjct: 128 FATLINACSILANLEIGRRIHA--LVEVSGLGSNLVACSSLIDMYGKCNHVDEARLIFDS 185
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYL----H 121
M RNVVSWT++I+ Y+Q+ +LF PN F L S + +C L
Sbjct: 186 MCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDKPNHFMLCSAVSACASLGSLGS 245
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK+ H + ++ +A +A+AL++MY+K C + + K+F ++ +VI + SMI
Sbjct: 246 GKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAK 305
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAV 238
L +++LF +M + R+++ P+ TF VL AC +GLV ++ +
Sbjct: 306 YGLGILSLQLFQEM--------VVRRIK-----PNDITFVGVLHACSHSGLV-DKGLELL 351
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD---LVSWNSILKAYALH 295
S+ KYG D + R G I + Q+ + + W ++L A L+
Sbjct: 352 DSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTLLSASRLY 411
Query: 296 GQAKEALQLFSNM--NVQPDSATFVSLLSACSHAG 328
G+ AL+ + + + Q + +V+L +A + AG
Sbjct: 412 GRVDIALEASNRLIESNQQVAGAYVTLSNAYALAG 446
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/592 (37%), Positives = 332/592 (56%), Gaps = 64/592 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+++ ++ YAK L+ AR FD MP+R+VVSW A++SGYAQ+G AEE RLF +
Sbjct: 192 RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEM 251
Query: 100 LQYFF-PNEFSLASVLISCDY-----LHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ P+E + +V+ +C L LV L K + + +V AL++MY+K +
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK-QIQLNCFVRTALLDMYAKCGS 310
Query: 154 ---------------------------------DEAWKVFENMEFRNVISWNSMIAAFRA 180
D A ++F M RNV++WNSMIA +
Sbjct: 311 IGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQ 370
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A AIELF +M + + + PD T V+ AC L + V
Sbjct: 371 NGQSAMAIELFKEM------------ITAKKLTPDEVTMVSVISACGHLGALELGNWVVR 418
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ + + NA+I Y+RCGS+ +K+VF +M D+VS+N+++ +A HG E
Sbjct: 419 FLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVE 478
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ L S M ++PD TF+ +L+ACSHAGL++EG KVF S+ + P +DHYACMV
Sbjct: 479 AINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMV 533
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGRVG + +A++ + MPMEP + ++ LL + R H + L ELAA KL +LEP +S
Sbjct: 534 DLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSG 593
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
F+ +SNIY +G + IR+ MK V+K G SW+E ++H+F + H + +
Sbjct: 594 NFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDD 653
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I++ L EL +++ GY+ + S L D+EEE KEE + HSEKLA+ +A++ +
Sbjct: 654 IYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALL----VSEAG 709
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+VIR++KN+R+C DCH +K+ S L G+ I+VRD+NRFH F D +CSC DYW
Sbjct: 710 AVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 178/436 (40%), Gaps = 75/436 (17%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDL--FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSW 76
GN QLH +I+N + + NH + A Y LF+ NV +
Sbjct: 12 GNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHY---THLLFNSTLNPNVFVF 68
Query: 77 TALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDA 136
T+++ Y+ + + +F + + + +LI G HA LK +
Sbjct: 69 TSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGHGS 128
Query: 137 HVYVANALINMYSK-SCADEAWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAK 193
+V NA+I+MY++ A KVF+ + R V WN+M++ + + E QA LF
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
M E + +
Sbjct: 189 MP----------------------------------------------------ERNVIT 196
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
A++ YA+ + +++ FD M +VSWN++L YA +G A+E L+LF M +
Sbjct: 197 WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGI 256
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILE 368
+PD T+V+++SACS G + ++ H QL+ + ++D+ + G I
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTL---HQKQIQLNCFVRTALLDMYAKCGSIGA 313
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL-AATKLKQLEPG-DSLGFVQMSNIY 426
A ++ E+ +SV W+ ++ + TR+ L +A +L PG + + + M Y
Sbjct: 314 ARRIFDELGAYRNSVTWNAMISA-----YTRVGNLDSARELFNTMPGRNVVTWNSMIAGY 368
Query: 427 CLSGSFNKARLIRKEM 442
+G A + KEM
Sbjct: 369 AQNGQSAMAIELFKEM 384
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 145/338 (42%), Gaps = 34/338 (10%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMI 175
++ H + +HA + SL H Y LIN ++ A + +F + NV + SM+
Sbjct: 13 NFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSML 72
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
++ +++ + + +F +Q G+ PD + I++K+
Sbjct: 73 -------------RFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG-----NGG 114
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD--LVSWNSILKAYA 293
H+ + K G D + NA+I YAR G I +++VFD++ ++ + WN+++ Y
Sbjct: 115 IGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYW 174
Query: 294 LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+A LF M + + T+ ++++ + ++ + F M E V +
Sbjct: 175 KWESEGQAQWLFDVMP-ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVV-----SW 228
Query: 354 ACMVDLLGRVGRILEAEKLIREM---PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
M+ + G E +L EM +EPD W ++ +C G+ LA L Q
Sbjct: 229 NAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQ 288
Query: 411 LEPGDSLGFVQMS--NIYCLSGSFNKARLIRKEMKGSR 446
+ + FV+ + ++Y GS AR I E+ R
Sbjct: 289 KQIQLNC-FVRTALLDMYAKCGSIGAARRIFDELGAYR 325
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/609 (34%), Positives = 336/609 (55%), Gaps = 64/609 (10%)
Query: 40 QDLFVTNHLINMYAK--FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
QD +V+ L+ YA F D A +F +P NV W +I G ++ + +
Sbjct: 63 QDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYG 122
Query: 98 SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SC 152
++ PN+F+ ++ +C G+ +H +K + + V++ +A I+MY+
Sbjct: 123 RMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGR 182
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM------------------ 194
++A K+F + E +V+ WN+MI + C + A LFA+M
Sbjct: 183 LEDARKMFYSGE-SDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKG 241
Query: 195 ---------------KNE----------------EEALFLFRQLQREGMAPDWCTFSIVL 223
++E +EAL +F+Q+QRE P S VL
Sbjct: 242 GNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVL 301
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
AC+ + VH+ + + + D V+ AL+ YA+CG + + +VF++M ++
Sbjct: 302 AACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIF 361
Query: 284 SWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+WN+++ A+HG+A++AL+LFS + ++P+ T V +L+AC+HAG V +G ++F +M
Sbjct: 362 TWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM 421
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
E +GV P+L+HY CMVDLLGR G EAE LI MPM+P++ +W LLG+CR HG L
Sbjct: 422 REFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDL 481
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
AE L +LEP +S +V +SNIY G F+ IRK MK ++ PG+S +++
Sbjct: 482 AERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNG 541
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEK 520
VHEF G HPQ + I++KL+ + +L+ G+ P+TS L DI+EE KE + +HSEK
Sbjct: 542 TVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEK 601
Query: 521 LALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
LA+ F ++N +L +R I I+KN+R+C DCH+ KL S + +EI+VRD R+HHFK+
Sbjct: 602 LAIAFGLIN--TLPGKR--IHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKN 657
Query: 581 RICSCNDYW 589
CSC D+W
Sbjct: 658 GTCSCKDFW 666
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 185/432 (42%), Gaps = 99/432 (22%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH---- 63
Y TLF AC++ +++ Q+H H++ + D+ + + I+MYA FG L+DAR
Sbjct: 135 YPTLFKACSVAQAVQEGRQIHGHVVKH--GIGSDVHIKSAGIHMYASFGRLEDARKMFYS 192
Query: 64 --------------------------LFDEMPKRNVVSWTALISGYAQHGNAEECFRLF- 96
LF +MP +N+ SW +I+G A+ GN + +LF
Sbjct: 193 GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFD 252
Query: 97 ----------CSLLQYFF---------------------PNEFSLASVLISCDYL----H 121
S++ + P F L+SVL +C +
Sbjct: 253 EMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQ 312
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFR 179
G+ VHA + S+ + AL++MY+K C D W+VFE M+ R + +WN+MI
Sbjct: 313 GRWVHAYLKRNSIKLDAVLGTALLDMYAK-CGRLDMGWEVFEEMKEREIFTWNAMIGG-- 369
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASA 237
A E+AL LF +LQ M P+ T VL AC AG V ++
Sbjct: 370 -----------LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV-DKGLRI 417
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHG 296
++ YG + + ++ R G S ++ + + M + W ++L A +HG
Sbjct: 418 FQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477
Query: 297 Q---AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV--VPQLD 351
A+ ++ + Q +S +V L + + G + +K+ ++++ G+ VP +
Sbjct: 478 NFDLAERVGKILLELEPQ-NSGRYVLLSNIYAKVGRFDDVSKI-RKLMKDRGIKTVPGVS 535
Query: 352 HYACMVDLLGRV 363
+VDL G V
Sbjct: 536 ----IVDLNGTV 543
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 125 VHALALKFSLDAHVYVANALINMYSK---SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H L L+ YV+ AL+ Y+ S D A KVF ++ NV WN +I
Sbjct: 52 LHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+AI + +M + P+ T+ + KAC+ + +H
Sbjct: 112 NKLFKAIYFYGRMVIDAR--------------PNKFTYPTLFKACSVAQAVQEGRQIHGH 157
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K+G D I +A IH YA G + ++++F D+V WN+++ Y G + A
Sbjct: 158 VVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAA 216
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
LF+ M V+ + ++ +++ + G + + K+F M E + ++ MVD
Sbjct: 217 KGLFAQMPVK-NIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI-----SWSSMVDGYI 270
Query: 362 RVGRILEAEKLIREMPME---PDSVIWSVLLGSCRKHG 396
GR EA ++ ++M E P I S +L +C G
Sbjct: 271 SAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIG 308
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I +++ AC+ G I Q +H ++ N + D + L++MYAK G LD +F+
Sbjct: 296 ILSSVLAACSNIGAIDQGRWVHAYLKRN--SIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG--- 122
EM +R + +W A+I G A HG AE+ LF L + PN +L VL +C +
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413
Query: 123 --KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAAF 178
++ + + +D + ++++ +S EA + +M + N W +++ A
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGAC 473
Query: 179 R 179
R
Sbjct: 474 R 474
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 116/259 (44%), Gaps = 19/259 (7%)
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC--GSISLSKQVFDKMTYHDLVSWN 286
+ + ++ + +H L+ + G D ++ AL+ YA + + +VF + ++ WN
Sbjct: 43 ITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWN 102
Query: 287 SILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++K + + +A+ + M + +P+ T+ +L ACS A VQEG ++ H + H
Sbjct: 103 IVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQI-HGHVVKH 161
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
G+ + + + + GR+ +A K+ E D V W+ ++ K G + E A
Sbjct: 162 GIGSDVHIKSAGIHMYASFGRLEDARKMF--YSGESDVVCWNTMIDGYLKCG---VLEAA 216
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
Q+ + + M N G+ AR + EM + +SW + V
Sbjct: 217 KGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMS-----ERDEISW---SSMVDG 268
Query: 465 FASGGKRHPQREAIFKKLE 483
+ S G R+ + IF++++
Sbjct: 269 YISAG-RYKEALEIFQQMQ 286
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 324/571 (56%), Gaps = 33/571 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFP 105
L++ YAK L DA HLFDE P+R++ +++L++ + + E + +L P
Sbjct: 126 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 185
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ F ++SV L G+ +HA + + V ++L++MY K D+ KVF
Sbjct: 186 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVF 245
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EALF 202
++M +N + W ++++ + + +A++LF M A+
Sbjct: 246 DSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVE 305
Query: 203 LFRQLQREGM-APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
LF +++R+G+ D SIV+ A L +H + GF + ++ NALI Y
Sbjct: 306 LFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMY 365
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
++C I +++VF+ +T+ D++SW +++ A HG+A+EAL L+ M +P+ TFV
Sbjct: 366 SKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 425
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
L+ ACSHAGLVQ+G ++F SM +G+ P+L HY C +DLL R G +LEAE+L+ MP
Sbjct: 426 GLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPY 485
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
EPD W LL +C K+ + + + KL +L P DS ++ +SN+Y ++G ++ +
Sbjct: 486 EPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKV 545
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
RK M G +RK PG SWIE F +G RE I LEE++ +++ GYVP+T
Sbjct: 546 RKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDT 605
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
S +HD+EE KE L+ HSE+LA+ F ++ SVIR++KN+R+CVDCH MKL
Sbjct: 606 SSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPP----GSVIRVVKNLRVCVDCHTVMKL 661
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S++ ++IVVRDS+RFHHF+ CSC+++W
Sbjct: 662 ISEITHRKIVVRDSSRFHHFEGGKCSCSEFW 692
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 158/341 (46%), Gaps = 89/341 (26%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
QLH H + + N D V + L++MY K G DD R +FD M +N V WTAL+SGYA
Sbjct: 208 QLHAHFVVSPYN--GDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYAS 265
Query: 86 HGNAEECFRLFCSL------------------------LQYF---------FPNEFSLAS 112
+G +EE +LF S+ ++ F + F L+
Sbjct: 266 NGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSI 325
Query: 113 VL-ISCD---YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFR 166
V+ S D ++ G+ +H ++ +++ V NALI+MYSK C+D A +VFE + FR
Sbjct: 326 VIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSK-CSDILSAREVFEGITFR 384
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+VISW +M+ EAQ EEAL L+ ++ G P+ TF ++ AC
Sbjct: 385 DVISWTTMVVG------EAQ-------HGRAEEALALYDRMVLAGAKPNEVTFVGLIYAC 431
Query: 227 --AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
AGLV ++ S+ +YG ++ ++ Y DL+S
Sbjct: 432 SHAGLV-QKGRQLFESMKNEYG----------------------ITPRLQHYTCYLDLLS 468
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS 325
+ G EA +L + M +PD AT+ +LLSAC+
Sbjct: 469 RS---------GHLLEAEELMTTMPYEPDEATWGALLSACT 500
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 125 VHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+HA LK L H AL++ Y+KS +A +F+ R++ ++S++ A
Sbjct: 107 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTA------ 160
Query: 184 EAQAIELFAKMKNEEEALFLFR-QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ + E AL + R L + + PD S V A L + R +H+
Sbjct: 161 -------VSHSASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHF 213
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ D V+ ++L+ Y +CGS ++VFD M+ + V W +++ YA +G+++EAL
Sbjct: 214 VVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEAL 273
Query: 303 QLFSNMNVQPDSATF--VSLLSACSHAGLVQEGNKV 336
QLF +M P F +L+S GLV G V
Sbjct: 274 QLFRSM---PGRNLFAWTALIS-----GLVNTGESV 301
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/577 (37%), Positives = 332/577 (57%), Gaps = 44/577 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D +TN LI Y+K + AR +F+ + R+++SW ++++GY Q+ CF +F +
Sbjct: 361 DTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMM 420
Query: 100 LQYFFPNEFSLASVLISCD--------YLHGKLVHALALKFSLDAHVY--VANALINMYS 149
L P+ SL + + + GK +H L+ V V+NA++ MY+
Sbjct: 421 LSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYA 480
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
K + +A K+F+ M+ R+ SWN+M+ + ++ E+ L +F +
Sbjct: 481 KFNRIADAEKIFKGMKNRDSYSWNAMMDGY-------------SRNAKFEDVLMIFLDIL 527
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK-YGFED----DTVIA--NALIHAY 261
++G D + SI+L +C LV+ + H+++AK + +D D++++ NALI Y
Sbjct: 528 KQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMY 587
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
++CGSI + QVF KM D+ SW +++ A HG A EALQLF M ++P+ TF+
Sbjct: 588 SKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFL 647
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE--- 375
+LL AC+H GLVQEG+ F SM ++G+ P ++HYACM+DL GR G+ A+ L+
Sbjct: 648 ALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGIT 707
Query: 376 --MPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
P D + +W VLLG+C + L AATK+ +LEP D ++ ++N+Y SG +
Sbjct: 708 LFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLW 767
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
A +RK M+ +RK G SWI+ NR H F +G HPQR+ I++KL +L + M
Sbjct: 768 EDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRM 827
Query: 493 GYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDC 552
GYVP T L LHD++E KE L HSEKLA+ F ++N G VIR+MKN+R+C DC
Sbjct: 828 GYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGV---GNGVIRVMKNLRVCEDC 884
Query: 553 HNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
H++MK AS L +EI++RDS RFH F+D CSC DYW
Sbjct: 885 HSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 194/401 (48%), Gaps = 38/401 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE- 67
A+L G I QLH I D + I MY++ G L+DA+ +FDE
Sbjct: 125 ASLLKVSCSTGEIGLCRQLHGWSIRT--GFGLDSGIRAAWITMYSRCGVLEDAQRVFDET 182
Query: 68 -MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYL 120
+ +++ W ++I+ Y HG E RLFC ++ P E + ASV+ +C +
Sbjct: 183 SLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEK 242
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
+G +VH +K L+A + N+L+ Y K C + A ++FE + ++V+SWN+MIAA
Sbjct: 243 YGAMVHGRIIKAGLEA-TNLWNSLVTFYGK-CGNLQHASQLFERISRKDVVSWNAMIAAN 300
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ LF +M E + P+ TF +L A +GL R +
Sbjct: 301 EQRGEGENALGLFRRMLKVEPPV-----------QPNRVTFLSLLSAVSGLSALRCGREI 349
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ I + E DT I N+LI Y++C + ++++F+++ D++SWNS+L Y + Q
Sbjct: 350 HAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQ 409
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSH--AGLV--QEGNKVFHSMLENHGVVP--- 348
+F M ++PDS + + +A S +GL+ + G ++ +L + P
Sbjct: 410 GRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR--ITPGGV 467
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
L ++ + + RI +AEK+ + M DS W+ ++
Sbjct: 468 SLSVSNAILKMYAKFNRIADAEKIFKGMK-NRDSYSWNAMM 507
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 223/455 (49%), Gaps = 64/455 (14%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVL-ISCD 118
A+ LFD P R+V+SW+ALI+ Y++ GN + F LF ++ + PN FSLAS+L +SC
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 119 Y--------LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEF--RN 167
LHG ++ F LD+ + A I MYS+ ++A +VF+ +
Sbjct: 134 TGEIGLCRQLHG---WSIRTGFGLDSGIRA--AWITMYSRCGVLEDAQRVFDETSLLALD 188
Query: 168 VISWNSMIAA--FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
++ WNS+IAA F C +E + LF KM + +AP T++ V+ A
Sbjct: 189 ILLWNSIIAAYIFHGCWVE--VLRLFCKM------------VSVGVVAPTELTYASVVNA 234
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
C E++ + VH I K G E T + N+L+ Y +CG++ + Q+F++++ D+VSW
Sbjct: 235 CGSSGEEKYGAMVHGRIIKAGLE-ATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSW 293
Query: 286 NSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNK----V 336
N+++ A G+ + AL LF M VQP+ TF+SLLSA S ++ G + +
Sbjct: 294 NAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHI 353
Query: 337 FHSMLE-NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW-SVLLGSCRK 394
F LE + + L + +G+ I E L+R D + W S+L G +
Sbjct: 354 FRLSLEVDTSITNSLITFYSKCREVGKAREIFE-RLLLR------DIISWNSMLAGYEQN 406
Query: 395 HGETRLAEL-AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI----RKEMKGSRVRK 449
+ R ++ L +EP DS + N + S + + LI KE+ G +R+
Sbjct: 407 EQQGRCFDIFKRMMLSGIEP-DSHSLTIIFN----AASRDSSGLIYFRRGKEIHGYILRR 461
Query: 450 Y-PGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
PG + + N + + + R E IFK ++
Sbjct: 462 ITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMK 496
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 195/414 (47%), Gaps = 44/414 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA++ +AC G K +H +I E +L+ N L+ Y K G L A LF+
Sbjct: 228 YASVVNACGSSGEEKYGAMVHGRIIKA-GLEATNLW--NSLVTFYGKCGNLQHASQLFER 284
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY---FFPNEFSLASVLISCDYLH--- 121
+ +++VVSW A+I+ Q G E LF +L+ PN + S+L + L
Sbjct: 285 ISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALR 344
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G+ +HA + SL+ + N+LI YSK C + +A ++FE + R++ISWNSM+A +
Sbjct: 345 CGREIHAHIFRLSLEVDTSITNSLITFYSK-CREVGKAREIFERLLLRDIISWNSMLAGY 403
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC----AGLVTERH 234
+ + + ++F +M G+ PD + +I+ A +GL+ R
Sbjct: 404 EQNEQQGRCFDIFKRM-------------MLSGIEPDSHSLTIIFNAASRDSSGLIYFRR 450
Query: 235 ASAVHSLIAKYGFEDDT--VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+H I + ++NA++ YA+ I+ ++++F M D SWN+++ Y
Sbjct: 451 GKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGY 510
Query: 293 ALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSM---LENHGV 346
+ + + ++ L +F ++ Q D + LL++C +Q G K FH++ L N
Sbjct: 511 SRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLG-KQFHAVVAKLFNGQD 569
Query: 347 VPQLDHYA----CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
P D ++ + + G I +A ++ +M D W+ ++ C HG
Sbjct: 570 CPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGCAHHG 622
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 38/343 (11%)
Query: 22 KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALIS 81
++ ++H +++ L V+N ++ MYAKF + DA +F M R+ SW A++
Sbjct: 449 RRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMD 508
Query: 82 GYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYL----HGKLVHALALKF---- 132
GY+++ E+ +F +L+ FP + SL+ +L SC L GK HA+ K
Sbjct: 509 GYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQ 568
Query: 133 ---SLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
D+ + + NALI+MYSK +A +VF ME ++V SW +MI L +A+
Sbjct: 569 DCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEAL 628
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYG 246
+LF +MK +G+ P+ TF +L ACA GLV E + S+ YG
Sbjct: 629 QLFERMKT-------------DGIKPNQVTFLALLMACAHGGLVQE-GSYYFDSMYNDYG 674
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFD-----KMTYHD--LVSWNSILKAYALHGQAK 299
+I + R G +K + + YHD L W +L A Q
Sbjct: 675 LSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLD 734
Query: 300 EALQLFSN-MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSM 340
++ + + ++P D AT++ L + + +GL ++ KV +M
Sbjct: 735 LGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAM 777
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/631 (35%), Positives = 332/631 (52%), Gaps = 75/631 (11%)
Query: 15 CALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVV 74
CA G QLH + + Q++FV N L++MYAK G +D+A +F M ++VV
Sbjct: 239 CASLGTHSLGKQLHCFAVTS--EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 75 SWTALISGYAQHGNAEECFRLFCSL-----------------------LQY--------- 102
SW A+++GY+Q G E+ RLF + L Y
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 103 ----FFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHV-------YVANALINM 147
PNE +L SVL C +HGK +H A+K+ +D V N LI+M
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 148 YSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
Y+K D A +F+++ + R+V++W MI + +A+EL ++M E+
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ---- 472
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV---IANALIHAY 261
P+ T S L ACA L R +H+ + + + V ++N LI Y
Sbjct: 473 -------TRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMY 523
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
A+CGSIS ++ VFD M + V+W S++ Y +HG +EAL +F M + D T +
Sbjct: 524 AKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+L ACSH+G++ +G + F+ M GV P +HYAC+VDLLGR GR+ A +LI EMPM
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
EP V+W L CR HG+ L E AA K+ +L + +SN+Y +G + I
Sbjct: 644 EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
R M+ V+K PG SW+E F G K HP + I++ L + + ++K +GYVPET
Sbjct: 704 RSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 763
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
ALHD+++E K++ L+ HSEKLAL + I+ + + IRI KN+R+C DCH
Sbjct: 764 GFALHDVDDEEKDDLLFEHSEKLALAYGILTT----PQGAAIRITKNLRVCGDCHTAFTY 819
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++ +I++RDS+RFHHFK+ CSC YW
Sbjct: 820 MSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 207/433 (47%), Gaps = 48/433 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHE-HMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +F AC +++ H ++ F + ++FV N L+ MY++ L DAR +FD
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFIS---NVFVGNALVAMYSRCRSLSDARKVFD 186
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYLH--- 121
EM +VVSW ++I YA+ G + +F + F P+ +L +VL C L
Sbjct: 187 EMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS 246
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
GK +H A+ + +++V N L++MY+K DEA VF NM ++V+SWN+M+A +
Sbjct: 247 LGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 180 ACKLEAQAIELFAKMKNEE----------------------EALFLFRQLQREGMAPDWC 217
A+ LF KM+ E+ EAL + RQ+ G+ P+
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKY-------GFEDDTVIANALIHAYARCGSISLS 270
T VL CA + H +H KY G D+ ++ N LI YA+C + +
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 271 KQVFDKMTY--HDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSA 323
+ +FD ++ D+V+W ++ Y+ HG A +AL+L S M +P++ T L A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C+ ++ G ++ L N L C++D+ + G I +A +L+ + M + V
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDNMMAKNEV 545
Query: 384 IWSVLLGSCRKHG 396
W+ L+ HG
Sbjct: 546 TWTSLMTGYGMHG 558
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 198/457 (43%), Gaps = 83/457 (18%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ +I H C I Q +H+ +++ L +T+HLI+ Y G L A
Sbjct: 27 APEITPPFIHKCK---TISQVKLIHQKLLSF---GILTLNLTSHLISTYISVGCLSHAVS 80
Query: 64 LFDEMPKRN--VVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL 120
L P + V W +LI Y +G A +C LF + + P+ ++ V +C +
Sbjct: 81 LLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI 140
Query: 121 H----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMI 175
G+ HAL+L ++V+V NAL+ MYS+ + +A KVF+ M +V+SWNS+I
Sbjct: 141 SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
++ A+E+F++M NE G PD T VL CA L T
Sbjct: 201 ESYAKLGKPKVALEMFSRMTNEF------------GCRPDNITLVNVLPPCASLGTHSLG 248
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H + + N L+ YA+CG + + VF M+ D+VSWN+++ Y+
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 296 GQAKEALQLFSNM--------------------------------------NVQPDSATF 317
G+ ++A++LF M ++P+ T
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLE--------NHG----VVPQLDHYACMVDLLGRVGR 365
+S+LS C+ G + G ++ ++ HG V+ QL +D+ + +
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL------IDMYAKCKK 422
Query: 366 ILEAEKLIREM-PMEPDSVIWSVLLGSCRKHGETRLA 401
+ A + + P E D V W+V++G +HG+ A
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 30/311 (9%)
Query: 101 QYFFPNEFSLASVLISCDYLHG-------KLVHALALKFSLDAHVYVANALINMY-SKSC 152
QY + FS ++ I+ ++H KL+H L F + + + + LI+ Y S C
Sbjct: 16 QYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGC 74
Query: 153 ADEAWKVFENMEFRN--VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A + + V WNS+I ++ + L+LF +
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSY-------------GDNGCANKCLYLFGLMHSL 121
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
PD TF V KAC + + R + H+L GF + + NAL+ Y+RC S+S +
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSH 326
++VFD+M+ D+VSWNSI+++YA G+ K AL++FS M +PD+ T V++L C+
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G G K H ++ + C+VD+ + G + EA + M ++ D V W+
Sbjct: 242 LGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWN 299
Query: 387 VLLGSCRKHGE 397
++ + G
Sbjct: 300 AMVAGYSQIGR 310
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 312/559 (55%), Gaps = 26/559 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV N LINMYAKFG L A +F++M R++VSW +L++ + Q+ ++ +
Sbjct: 274 DLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMH 333
Query: 101 QY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAH-VYVANALINMYSK-SCA 153
P+ +L S+ ++L + +H + H + + NA+I+MY+K
Sbjct: 334 SIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFI 393
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D A KVFE + ++VISWNS+I + L +AI++++ M+ G
Sbjct: 394 DSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMR------------YYSGAV 441
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ T+ +L A + L + H + K D ++ L+ Y +CG ++ + +
Sbjct: 442 PNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSL 501
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F ++ + VSWN+I+ + LHG +A++LF M V+PD TFVSLLSACSH+GLV
Sbjct: 502 FYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLV 561
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG F M E +G+ P L HY CMVDL GR G + +A ++ MP+ PD +W LLG
Sbjct: 562 DEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLG 621
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR H L + L ++E + +V +SNIY G + +R + ++K
Sbjct: 622 ACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKT 681
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IE++ ++ F +G + HP+ E I+ +L L ++K +GYVP+ + L D+E++ K
Sbjct: 682 PGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEK 741
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E L HSE+LA+ F I++ ++ ++I KN+R+C DCHN K S + +EI+VR
Sbjct: 742 ENILTSHSERLAMAFGIIST----PPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVR 797
Query: 571 DSNRFHHFKDRICSCNDYW 589
DSNRFHHFKD +CSC DYW
Sbjct: 798 DSNRFHHFKDGVCSCGDYW 816
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 196/367 (53%), Gaps = 26/367 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+++ I+ Y++FG++ A +LFD M R++ +W A+ISG+ +G E +F +
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ + +++S+L C D + G L+H A+K L+ ++V NALINMY+K
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A +F M+ R+++SWNS++AAF K A+ ++ KM G+ P
Sbjct: 293 SAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKM-------------HSIGVVP 339
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKY-GFEDDTVIANALIHAYARCGSISLSKQV 273
D T + A L + ++H + + F D + NA+I YA+ G I +++V
Sbjct: 340 DLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKV 399
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGL 329
F+ + D++SWNS++ Y+ +G A EA+ ++S+M P+ T+VS+L+A S G
Sbjct: 400 FEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGA 459
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+++G K +++N + + C+VD+ G+ G++ +A L E+P + SV W+ ++
Sbjct: 460 LKQGMKAHGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQ-SSVSWNAII 517
Query: 390 GSCRKHG 396
HG
Sbjct: 518 SCHGLHG 524
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 190/381 (49%), Gaps = 25/381 (6%)
Query: 24 AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
A QLH ++ + Q +F++ LIN YA G + AR FD++ ++V +W ++IS Y
Sbjct: 59 AKQLHALLV--VSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAY 116
Query: 84 AQHGN---AEECFRLFCSLLQYFFPNEFSLASVLISCDYL-HGKLVHALALKFSLDAHVY 139
A+ G+ A +CF F S + + ++ V+ +C L G+ VH L LK + VY
Sbjct: 117 ARIGHFHAAVDCFNEFLS-TSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFECDVY 175
Query: 140 VANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
+A + I+ YS+ A +F+NM R++ +WN+MI+ F A+A+E+F +M+ +
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKS 235
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
++ D T S +L C L +H K G E D + NALI
Sbjct: 236 VSM-------------DSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALI 282
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
+ YA+ G + ++ +F++M D+VSWNS+L A+ + + AL +++ M V PD
Sbjct: 283 NMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLL 342
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T VSL S + G + + + + ++D+ ++G I A K+
Sbjct: 343 TLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEG 402
Query: 376 MPMEPDSVIWSVLLGSCRKHG 396
+P++ D + W+ L+ ++G
Sbjct: 403 LPVK-DVISWNSLITGYSQNG 422
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 161/340 (47%), Gaps = 27/340 (7%)
Query: 107 EFSLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYS-KSCADEAWKVFENME 164
E + + C +H K +HAL + ++++ LIN Y+ A F+ ++
Sbjct: 43 EIDFNRIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ 102
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
++V +WNSMI+A+ A++ F + L + D TF V++
Sbjct: 103 TKDVYTWNSMISAYARIGHFHAAVDCFNEF------------LSTSFLQSDHYTFPPVIR 150
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
AC L R VH L+ K GFE D IA + IH Y+R G +SL+ +FD M D+ +
Sbjct: 151 ACGNLDDGRK---VHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGT 207
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
WN+++ + L+G+ EAL++F M +V DS T SLL C + G + H
Sbjct: 208 WNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISG-VLIHVYA 266
Query: 342 ENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
G+ + D + C ++++ + G + AE + +M + D V W+ LL + ++ +
Sbjct: 267 IKLGL--EFDLFVCNALINMYAKFGELRSAETIFNQMKVR-DIVSWNSLLAAFEQNKKPV 323
Query: 400 LAELAATKLKQLE-PGDSLGFVQMSNIYCLSGSFNKARLI 438
+A K+ + D L V ++++ G+F +R I
Sbjct: 324 IALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSI 363
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G +KQ M+ H +I NF D+FV+ L++MY K G L DA LF E+P ++ VSW A
Sbjct: 458 GALKQGMKAHGQLIKNFLY--FDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNA 515
Query: 79 LISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH 137
+IS + HG + +LF + + P+ + S+L +C H LV F L
Sbjct: 516 IISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACS--HSGLVDEGQWCFQLMQE 573
Query: 138 VYVA-------NALINMYSKSC-ADEAWKVFENMEFRNVIS-WNSMIAAFR 179
Y +++++ ++ ++A+ +NM R +S W +++ A R
Sbjct: 574 TYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACR 624
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/556 (38%), Positives = 326/556 (58%), Gaps = 26/556 (4%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+V N ++ MY + +++DA +F+ + + ++ ++I+GY G + + ++
Sbjct: 144 YVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGE 203
Query: 103 FFPNEF-SLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
++ S +VL C D + G VHA ALK L+ +VYV +AL++MY K +A
Sbjct: 204 AEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDA 263
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+ FE + +NV+SW +++ A+ +L E+AL LF ++ EG+ P+
Sbjct: 264 NRAFEVLPEKNVVSWTAVMTAYTQNELY-------------EDALQLFLDMEMEGVQPNE 310
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T+++ L +CAGL R +A+ + + K G D +++NAL++ Y++ GSI + +VF
Sbjct: 311 FTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFIS 370
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M D+VSWN I+ YA HG A+E ++ F +M V P TFV +LSAC+ GLV E
Sbjct: 371 MPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEA 430
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
++M++ G+ P +HY CMV LL RVGR+ EAE+ I + D V W LL SC+
Sbjct: 431 FYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQ 490
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
+ L A ++ QLEP D +V +SN+Y + ++ +RK M+ VRK PG+
Sbjct: 491 VYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGV 550
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWI + + VH F S K HPQ + I KKLEELI Q+K +GYVP ++ LHDI++E KEE
Sbjct: 551 SWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEH 610
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L +HSEKLAL F +++ + + I IMKN+RIC DCH +KL S + ++IVVRD+
Sbjct: 611 LMYHSEKLALAFGLIHT----PKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAV 666
Query: 574 RFHHFKDRICSCNDYW 589
RFH + ICSCNDYW
Sbjct: 667 RFHCIEGGICSCNDYW 682
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 193/390 (49%), Gaps = 30/390 (7%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ + LH +I D+ + N+LI+ YAK G + AR +FD MP RN VS
Sbjct: 25 GDLSKGKALHARLITA---AHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANL 81
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSL 134
L+SGYA G +E +L + F NE+ L++ + + Y G+ H A+K
Sbjct: 82 LMSGYASSGRHKESLQLL--RVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGF 139
Query: 135 DAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
YV NA++ MY + CA ++A KVFE++ + ++NSMI + L+ +
Sbjct: 140 AEQRYVFNAVLYMYCQ-CAHMEDASKVFESVSGFDAFAFNSMINGY----LDRGQL---- 190
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ +L + R + E D+ ++ VL CA + + VH+ K E +
Sbjct: 191 -----DGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVY 245
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ +AL+ Y +C + + + F+ + ++VSW +++ AY + ++ALQLF +M
Sbjct: 246 VGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEG 305
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
VQP+ T+ L++C+ ++ GN + +++ G L ++++ + G I +A
Sbjct: 306 VQPNEFTYAVALNSCAGLAALRTGNALGACVMKT-GHWDHLLVSNALMNMYSKSGSIEDA 364
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
++ MP+ D V W++++ HG R
Sbjct: 365 HRVFISMPLR-DVVSWNLIITGYAHHGLAR 393
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 153/297 (51%), Gaps = 37/297 (12%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
+++V + L++MY K ++ DA F+ +P++NVVSWTA+++ Y Q+ E+ +LF +
Sbjct: 243 NVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDME 302
Query: 100 LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
++ PNEF+ A L SC L G + A +K H+ V+NAL+NMYSKS + +
Sbjct: 303 MEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIE 362
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A +VF +M R+V+SWN +I + L + +E F M + + P
Sbjct: 363 DAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLS-------------AAVIP 409
Query: 215 DWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ TF VL ACA GLV E +++++ + G ++ R G + +++
Sbjct: 410 SYVTFVGVLSACAQLGLVDEAF-YYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAER 468
Query: 273 -VFDKMTYHDLVSWNSIL------KAYAL-HGQAKEALQLFSNMNVQP-DSATFVSL 320
+ + D+V+W S+L K Y L H A++ LQL +P D T+V L
Sbjct: 469 FIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQL------EPSDVGTYVLL 519
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/559 (36%), Positives = 317/559 (56%), Gaps = 27/559 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV + ++N+YAK G +DDA +FD M KR+ V+W+ +++G+ G + ++ +
Sbjct: 136 NDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRM 195
Query: 100 LQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
+ +E + V+ +C D G VH L+ ++ V ++ +L++MY+K+
Sbjct: 196 RRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLF 255
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+A +VFE M RN +SW+++I+ A+ N +EAL LFR +Q G+
Sbjct: 256 DQARRVFELMPHRNDVSWSALISQL-------------AQYGNADEALGLFRMMQVSGLH 302
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ L AC+ L + ++H I + E D ++ A+I Y++CGS+S ++ +
Sbjct: 303 PNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQML 361
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLV 330
FDK+ DL+SWN ++ HG+ ++AL LF M V+PD ATF SLLSA SH+GLV
Sbjct: 362 FDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLV 421
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG F+ M+ +G+ P H C+VDLL R G + EA L+ + +P I LL
Sbjct: 422 EEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLS 481
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
C + + L E A K+ +L+PGD +SN+Y + ++ K R +RK MK +K
Sbjct: 482 GCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKA 541
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
PG S IEI +H F + HPQ I + + +L +++ MGY+P+T HD+EE K
Sbjct: 542 PGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVK 601
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E+ L HSE+LA F ++N R + ++KN+R+C DCH+ +K S + +EIVVR
Sbjct: 602 EQLLSRHSERLATAFGLLNTSPGTR----LVVIKNLRVCGDCHDAIKYMSKIADREIVVR 657
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+ RFHHFKD CSC DYW
Sbjct: 658 DAKRFHHFKDGACSCGDYW 676
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 183/371 (49%), Gaps = 30/371 (8%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKR--NVVSWTALISGYAQHGNAEECFRLFCSLL 100
+++ L YA+ G L A P ++ +W AL++ +++ + E R+F +L
Sbjct: 37 ILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALP 96
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DE 155
P+ + L +C D G++V A ++V ++++N+Y+K A D+
Sbjct: 97 PAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDD 156
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A KVF+ M R+ ++W++M+ F QAIE++ +M+ R+G+ D
Sbjct: 157 AVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMR-------------RDGLEAD 203
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
V++ACA R ++VH + ++ + D VI+ +L+ YA+ G +++VF+
Sbjct: 204 EVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFE 263
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQE 332
M + + VSW++++ A +G A EAL LF M V P+S V L ACS GL++
Sbjct: 264 LMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKL 323
Query: 333 GNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G + +L +LD ++D+ + G + A+ L ++ + D + W+V++
Sbjct: 324 GKSIHGFILRTL----ELDRMVGTAVIDMYSKCGSLSSAQMLFDKV-VSRDLISWNVMIA 378
Query: 391 SCRKHGETRLA 401
C HG R A
Sbjct: 379 CCGAHGRGRDA 389
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 24/295 (8%)
Query: 110 LASVLISCDYLHG-KLVHALAL-KFSLDAHVYVANALINMYSKS---CADEAWKVFENME 164
L +L SC L +HAL + S H +++ L Y+++ A E+
Sbjct: 6 LRRLLSSCAALRTLTRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTS 65
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
++ +WN+++AA ++ + EAL +FR L PD TF++ L
Sbjct: 66 PSSIPAWNALLAAH-------------SRGASPHEALRVFRALP-PAARPDSTTFTLALS 111
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA L V + G+ +D + +++++ YA+CG++ + +VFD+M D V+
Sbjct: 112 ACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVT 171
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W++++ + GQ +A++++ M ++ D V ++ AC+ G + G V H L
Sbjct: 172 WSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASV-HGYL 230
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H + + +VD+ + G +A ++ MP D V WS L+ ++G
Sbjct: 231 LRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRND-VSWSALISQLAQYG 284
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 334/578 (57%), Gaps = 33/578 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+FV N LI+ Y G LD A +F + +++VVSW ++I+G+ Q G+ ++ LF +
Sbjct: 167 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 226
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
+ + ++ VL +C D G+ V + + ++ ++ +ANA+++MY+K + +
Sbjct: 227 SEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 286
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---------------- 198
+A ++F+ ME ++ ++W +M+ + + A E+ M ++
Sbjct: 287 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGK 346
Query: 199 --EALFLFRQLQ-REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL +F +LQ ++ + + T L ACA + +HS I K G + + + +
Sbjct: 347 PNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTS 406
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALIH Y++CG + +++VF+ + D+ W++++ A+HG EA+ +F M NV+P
Sbjct: 407 ALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKP 466
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ TF ++ ACSH GLV E +F+ M ++G+VP+ HYAC+VD+LGR G + +A K
Sbjct: 467 NGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKF 526
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
I MP+ P + +W LLG+C+ H LAE+A T+L +LEP + V +SNIY SG +
Sbjct: 527 IEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKW 586
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
+ +RK M+ + ++K PG S IEI+ +HEF SG HP E ++ KL E++ +LK
Sbjct: 587 DNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN 646
Query: 493 GYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GY PE S L IEEE KE+ L HSEKLA+ + +++ IR++KN+R+C D
Sbjct: 647 GYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLIST----EAPKAIRVIKNLRMCGD 702
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH KL S L +EI+VRD RFHHF++ CSCND+W
Sbjct: 703 CHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 210/462 (45%), Gaps = 82/462 (17%)
Query: 20 NIKQAMQLHEHMINNF----PNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVS 75
+++Q Q H HMI P LF I + F L+ AR +FDE+P+ N +
Sbjct: 43 SLRQLKQTHAHMIRTGMFSDPYSASKLFA----IAALSSFASLEYARKVFDEIPQPNSFT 98
Query: 76 WTALISGYAQHGNAEECFRLFCSLLQYF---------FPNEFSLASVLISCDYLH----G 122
W LI YA + CS+ + +PN+++ ++ + + G
Sbjct: 99 WNTLIRAYASGPDP------VCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLG 152
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +H +A+K ++ + V+VAN+LI+ Y SC D A KVF ++ ++V+SWNSMI
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVVSWNSMING--- 208
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
F + + ++AL LF++++ E + T VL ACA + V S
Sbjct: 209 ----------FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCS 258
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD------------------------- 275
I + + +ANA++ Y +CGSI +K++FD
Sbjct: 259 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 318
Query: 276 ------KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACS 325
M D+V+WN+++ AY +G+ EAL +F + N++ + T VS LSAC+
Sbjct: 319 AREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACA 378
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G ++ G + HS ++ +G+ + ++ + + G + +A ++ + + D +W
Sbjct: 379 QVGALELG-RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVW 436
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 427
S ++G HG +E K E V +N++C
Sbjct: 437 SAMIGGLAMHGCG--SEAVDMFYKMQEANVKPNGVTFTNVFC 476
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 155/327 (47%), Gaps = 22/327 (6%)
Query: 123 KLVHALALKFSLDAHVYVAN---ALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFR 179
K HA ++ + + Y A+ A+ + S + + A KVF+ + N +WN++I A+
Sbjct: 48 KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ +I F M + E + P+ TF ++KA A + + ++H
Sbjct: 108 SGPDPVCSIWAFLDMVSSESQCY-----------PNKYTFPFLIKAAAEVSSLSLGQSLH 156
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K D +AN+LIH Y CG + + +VF + D+VSWNS++ + G
Sbjct: 157 GMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 216
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL+LF M +V+ T V +LSAC+ ++ G +V S +E + V L M
Sbjct: 217 KALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVC-SYIEENRVNVNLTLANAM 275
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
+D+ + G I +A++L M E D+V W+ +L + + E A L + D
Sbjct: 276 LDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG---YAISEDYEAAREVLNAMPKKDI 331
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ + + + Y +G N+A L+ E++
Sbjct: 332 VAWNALISAYEQNGKPNEALLVFHELQ 358
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 331/595 (55%), Gaps = 27/595 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
ATL +AC ++ Q+H + I + N L ++YAK G LD A F +
Sbjct: 144 ATL-NACLASCDVDLGKQVHGYAIKYGAESITSM--GNSLCSLYAKLGSLDSALRAFWRI 200
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-----LQYFFPNEFSLASVLISC----DY 119
P++NV++WT +IS A+ EEC L SL + PNEF+L SV+ C D
Sbjct: 201 PEKNVITWTTMISACAED---EECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDL 257
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAF 178
GK V A + K + ++ V N+ + +Y K DEA ++FE ME ++I+WN+MI+ +
Sbjct: 258 NLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGY 317
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A +++ +L A+ + + AL +FR L+R M PD TFS +L C+ ++ +
Sbjct: 318 -AQIMDSAKDDLQARSRGFQ-ALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI 375
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K GF D V+ +AL++ Y +CG I + + F +M V+W S++ Y+ HGQ
Sbjct: 376 HAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQP 435
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EA+QLF M V+P+ TFVSLLSACS+AGLV+E F M + + + P +DHY C
Sbjct: 436 QEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGC 495
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
M+D+ R+GR+ +A I+ EP+ IWS L+ CR HG LA AA KL +L+P
Sbjct: 496 MIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKG 555
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
++ + N+Y + + +RK MK V SWI I+++V+ F + + HPQ
Sbjct: 556 IETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQA 615
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE--QLYHHSEKLALVFAIMNQGSL 533
+++ LE L+ + K +GY P + L D E++ K L HHSE+LA+ ++
Sbjct: 616 TELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPP- 674
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ +R+ KNI +C DCH+ +KL S L +EI+VRDS R H FKD CSC D+
Sbjct: 675 ---GATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 185/362 (51%), Gaps = 34/362 (9%)
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASV----L 114
DAR LFD MP+RNVV+WTAL++GY + +F +L+ +P+ ++L + L
Sbjct: 91 DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150
Query: 115 ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
SCD GK VH A+K+ ++ + N+L ++Y+K D A + F + +NVI+W +
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI+ AC + + +EL + LF + +G+ P+ T + V+ C +
Sbjct: 211 MIS---ACAEDEECVEL---------GMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLN 258
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
V + K G E + + N+ ++ Y R G + ++F++M +++WN+++ YA
Sbjct: 259 LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA 318
Query: 294 ---------LHGQAK--EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
L +++ +AL +F ++ ++PD TF S+LS CS +++G ++ H+
Sbjct: 319 QIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI-HA 377
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
G + + + +V++ + G I +A K EMP V W+ ++ +HG+ +
Sbjct: 378 QTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSMISGYSQHGQPQ 436
Query: 400 LA 401
A
Sbjct: 437 EA 438
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 29/246 (11%)
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +A ++F+ M RNV++W +++ + A +E+F +M G
Sbjct: 89 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEM-------------LEMGR 135
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P T L AC VH KYG E T + N+L YA+ GS+ + +
Sbjct: 136 YPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALR 195
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKE-ALQLFSNM---NVQPDSATFVSLLSACSHAG 328
F ++ ++++W +++ A A + E + LF +M V P+ T S++S C
Sbjct: 196 AFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRL 255
Query: 329 LVQEGNKV----FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ G +V F E + V Y L R G EA +L + ME S+I
Sbjct: 256 DLNLGKQVQAFSFKIGCETNLPVKNSTMY-----LYLRKGETDEAMRLFEQ--MEDASII 308
Query: 385 -WSVLL 389
W+ ++
Sbjct: 309 TWNAMI 314
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 331/595 (55%), Gaps = 27/595 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
ATL +AC ++ Q+H + I + N L ++YAK G LD A F +
Sbjct: 184 ATL-NACLASCDVDLGKQVHGYAIKYGAESITSM--GNSLCSLYAKLGSLDSALRAFWRI 240
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-----LQYFFPNEFSLASVLISC----DY 119
P++NV++WT +IS A+ EEC L SL + PNEF+L SV+ C D
Sbjct: 241 PEKNVITWTTMISACAED---EECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDL 297
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAF 178
GK V A + K + ++ V N+ + +Y K DEA ++FE ME ++I+WN+MI+ +
Sbjct: 298 NLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGY 357
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A +++ +L A+ + + AL +FR L+R M PD TFS +L C+ ++ +
Sbjct: 358 -AQIMDSAKDDLQARSRGFQ-ALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI 415
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K GF D V+ +AL++ Y +CG I + + F +M V+W S++ Y+ HGQ
Sbjct: 416 HAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQP 475
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EA+QLF M V+P+ TFVSLLSACS+AGLV+E F M + + + P +DHY C
Sbjct: 476 QEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGC 535
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
M+D+ R+GR+ +A I+ EP+ IWS L+ CR HG LA AA KL +L+P
Sbjct: 536 MIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKG 595
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
++ + N+Y + + +RK MK V SWI I+++V+ F + + HPQ
Sbjct: 596 IETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQA 655
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE--QLYHHSEKLALVFAIMNQGSL 533
+++ LE L+ + K +GY P + L D E++ K L HHSE+LA+ ++
Sbjct: 656 TELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPP- 714
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ +R+ KNI +C DCH+ +KL S L +EI+VRDS R H FKD CSC D+
Sbjct: 715 ---GATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 208/417 (49%), Gaps = 36/417 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ +Y L H C G++ A +H HM D+FV L+N Y + DAR L
Sbjct: 78 SAMYVPLLHRCVETGSLGAARAVHGHMAKT--GASADMFVATSLVNAYMRCSAARDARRL 135
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASV----LISCDY 119
FD MP+RNVV+WTAL++GY + +F +L+ +P+ ++L + L SCD
Sbjct: 136 FDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDV 195
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH A+K+ ++ + N+L ++Y+K D A + F + +NVI+W +MI+
Sbjct: 196 DLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMIS-- 253
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
AC + + +EL + LF + +G+ P+ T + V+ C + V
Sbjct: 254 -ACAEDEECVEL---------GMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV 303
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA----- 293
+ K G E + + N+ ++ Y R G + ++F++M +++WN+++ YA
Sbjct: 304 QAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDS 363
Query: 294 ----LHGQAK--EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
L +++ +AL +F ++ ++PD TF S+LS CS +++G ++ H+
Sbjct: 364 AKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI-HAQTIKS 422
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G + + + +V++ + G I +A K EMP V W+ ++ +HG+ + A
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSMISGYSQHGQPQEA 478
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 5/191 (2%)
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
EG A + +L C + A AVH +AK G D +A +L++AY RC +
Sbjct: 72 EGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARD 131
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSH 326
++++FD M ++V+W +++ Y L+ Q L++F M P T + L+AC
Sbjct: 132 ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 191
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+ V G +V H +G + L ++G + A + +P E + + W+
Sbjct: 192 SCDVDLGKQV-HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVITWT 249
Query: 387 VLLGSCRKHGE 397
++ +C + E
Sbjct: 250 TMISACAEDEE 260
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 331/595 (55%), Gaps = 27/595 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
ATL +AC ++ Q+H + I + N L ++YAK G LD A F +
Sbjct: 184 ATL-NACLASCDVDLGKQVHGYAIKYGAESITSM--GNSLCSLYAKLGSLDSALRAFWRI 240
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-----LQYFFPNEFSLASVLISC----DY 119
P++NV++WT +IS A+ EEC L SL + PNEF+L SV+ C D
Sbjct: 241 PEKNVITWTTMISACAED---EECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDL 297
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAF 178
GK V A + K + ++ V N+ + +Y K DEA ++FE ME ++I+WN+MI+ +
Sbjct: 298 NLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGY 357
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A +++ +L A+ + + AL +FR L+R M PD TFS +L C+ ++ +
Sbjct: 358 -AQIMDSAKDDLQARSRGFQ-ALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI 415
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K GF D V+ +AL++ Y +CG I + + F +M V+W S++ Y+ HGQ
Sbjct: 416 HAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQP 475
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EA+QLF M V+P+ TFVSLLSACS+AGLV+E F M + + + P +DHY C
Sbjct: 476 QEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGC 535
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
M+D+ R+GR+ +A I+ EP+ IWS L+ CR HG LA AA KL +L+P
Sbjct: 536 MIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKG 595
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
++ + N+Y + + +RK MK V SWI I+++V+ F + + HPQ
Sbjct: 596 IETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQA 655
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE--QLYHHSEKLALVFAIMNQGSL 533
+++ LE L+ + K +GY P + L D E++ K L HHSE+LA+ ++
Sbjct: 656 TELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQT--- 712
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ +R+ KNI +C DCH+ +KL S L +EI+VRDS R H FKD CSC D+
Sbjct: 713 -PPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 209/417 (50%), Gaps = 36/417 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ +Y L H C G++ A +H HM D+FV L+N Y + G DAR L
Sbjct: 78 SAMYVPLLHRCVEMGSLGAARAVHGHMAKT--GAGADMFVATSLVNAYMRCGAARDARRL 135
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASV----LISCDY 119
FD MP+RNVV+WTAL++GY + +F +L+ +P+ ++L + L SCD
Sbjct: 136 FDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDV 195
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH A+K+ ++ + N+L ++Y+K D A + F + +NVI+W +MI+
Sbjct: 196 DLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMIS-- 253
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
AC + + +EL L LF + +G+ P+ T + V+ C + V
Sbjct: 254 -ACAEDEECVEL---------GLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV 303
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA----- 293
+ K G E + + N+ ++ Y R G + ++F++M +++WN+++ YA
Sbjct: 304 QAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDS 363
Query: 294 ----LHGQAK--EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
L +++ +AL +F ++ ++PD TF S+LS CS +++G ++ H+
Sbjct: 364 AKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI-HAQTIKS 422
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G + + + +V++ + G I +A K EMP V W+ ++ +HG+ + A
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSMISGYSQHGQPQEA 478
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
EG A + +L C + + A AVH +AK G D +A +L++AY RCG+
Sbjct: 72 EGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARD 131
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSH 326
++++FD M ++V+W +++ Y L+ Q L++F M P T + L+AC
Sbjct: 132 ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 191
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+ V G +V H +G + L ++G + A + +P E + + W+
Sbjct: 192 SCDVDLGKQV-HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVITWT 249
Query: 387 VLLGSCRKHGE 397
++ +C + E
Sbjct: 250 TMISACAEDEE 260
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/603 (36%), Positives = 333/603 (55%), Gaps = 41/603 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A CA + +H+ ++ + PQD + + L+NMY K + +AR +F+
Sbjct: 134 FACALGGCASVAGLADGRAIHQRILAS--KVPQDDVLQDSLLNMYLKCDEMVEARKVFEG 191
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFC--SLLQYFFPNEFSLASVLISCDYL----H 121
M RNV S+TA+IS Y Q G E LF S ++ PN ++ A++L + + L
Sbjct: 192 MKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK 251
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRA 180
G+ VH D +V V NAL+ MY K + EA KVF++M RNVISW SMIAA+
Sbjct: 252 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAY-- 309
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ N +EAL LF+++ E P +FS L ACA L +H
Sbjct: 310 -----------AQHGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHH 355
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ + + +L+ YARCGS+ +++VF++M D S N+++ A+ HG+ K+
Sbjct: 356 RVVEANLASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQ 414
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+++ M + D TFVS+L ACSH LV + S++ +HGVVP ++HY CMV
Sbjct: 415 ALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMV 474
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+LGR GR+ +AE+L+ MP + D+V W LL C++HG+ E AA K+ +L P ++L
Sbjct: 475 DVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETL 534
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR-- 475
+V +SN+Y + F+ AR +RKEM+ V + +S+IEI+N +H F SGG+ Q
Sbjct: 535 PYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGH 594
Query: 476 -----EAIFKKLEELIGQLKGMGYVPETSLALHD----IEEEHKEEQLYHHSEKLALVFA 526
E + L EL+ +K GYVP+T + EE K+ L HSE+LA+ +
Sbjct: 595 DGRTMERVRSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYG 654
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
++ R +R++ + R+C CH+ +KL SD+ K I VRD +RFHHF+ CSC
Sbjct: 655 LIAAKDPDDSRP-LRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCG 713
Query: 587 DYW 589
D+W
Sbjct: 714 DHW 716
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 226/424 (53%), Gaps = 26/424 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I +L AC +++ +LHEH+I D+ + L+ MYAK G LDDA+ +F+
Sbjct: 32 IVTSLVAACTKLQALEEGRRLHEHLI--ITGFRTDIPLETALLQMYAKCGSLDDAKRVFE 89
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----H 121
M +++ +W+++I+ YA+ G E L+ ++ + PN + A L C +
Sbjct: 90 GMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLAD 149
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H L + + ++L+NMY K C + EA KVFE M+ RNV S+ +MI+A+
Sbjct: 150 GRAIHQRILASKVPQDDVLQDSLLNMYLK-CDEMVEARKVFEGMKARNVRSYTAMISAYV 208
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+A+ELF++M + E + P+ TF+ +L A GL VH
Sbjct: 209 QAGEHAEALELFSRMS------------KVEAIEPNAYTFATILGAVEGLGNLEKGRKVH 256
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+A GF+ + V+ NAL+ Y +CGS +++VFD MT +++SW S++ AYA HG +
Sbjct: 257 RHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQ 316
Query: 300 EALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
EAL LF M+V+P +F S L+AC+ G + EG ++ H ++E + PQ++ ++ +
Sbjct: 317 EALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQME--TSLLSM 374
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLG 418
R G + +A ++ M D+ + ++ + +HG + A K++Q P D +
Sbjct: 375 YARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGIT 433
Query: 419 FVQM 422
FV +
Sbjct: 434 FVSV 437
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 173/342 (50%), Gaps = 26/342 (7%)
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVF 160
++F + S++ +C L G+ +H + + + AL+ MY+K + D+A +VF
Sbjct: 29 DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 88
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
E ME +++ +W+S+IAA+ A+ E A+ L+R++ EG+ P+ TF+
Sbjct: 89 EGMEIKDLFAWSSIIAAY-------------ARAGRGEMAVVLYRRMIAEGVEPNVVTFA 135
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
L CA + A+H I D V+ ++L++ Y +C + +++VF+ M
Sbjct: 136 CALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKAR 195
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKV 336
++ S+ +++ AY G+ EAL+LFS M+ ++P++ TF ++L A G +++G KV
Sbjct: 196 NVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKV 255
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H L + G + +V + G+ G +EA K+ M + + W+ ++ + +HG
Sbjct: 256 -HRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR-NVISWTSMIAAYAQHG 313
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
+ A L K +EP + F N L G+ ++ R I
Sbjct: 314 NPQEA-LNLFKRMDVEP-SGVSFSSALNACALLGALDEGREI 353
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+AL L+ +++ G+ D + ++ AC L +H + GF D + AL+
Sbjct: 13 QALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALL 72
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
YA+CGS+ +K+VF+ M DL +W+SI+ AYA G+ + A+ L+ M V+P+
Sbjct: 73 QMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVV 132
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
TF L C+ + +G + +L + VPQ D
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASK--VPQDD 166
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/595 (35%), Positives = 335/595 (56%), Gaps = 30/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++T AC L + Q+H+ + + V N +I+MY+K G +++A +F+
Sbjct: 76 FSTNLKACGLLNGLDIGRQIHDICVKTGFDMVN--VVGNSIIDMYSKCGRINEAACMFEV 133
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYL----HG 122
MP RN++SW A+I+GY G E+ LF + + F +EF+ S L +C L G
Sbjct: 134 MPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEG 193
Query: 123 KLVHALALK--FSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
+HA + F + VA ALI++Y K C A +VF ++E ++VISW ++I +
Sbjct: 194 NQIHAFLITGGFLYSVNTAVAGALIDLYVK-CGKLFMARRVFSHIEEKHVISWTALILGY 252
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A+ N E++ LFRQL+ + D S ++ A + +
Sbjct: 253 -------------AQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQM 299
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K D + N+++ Y +CG I+ ++++F +M +++SW ++ Y HG
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
KEA++LF M + +PD T++++L CSH+GLV++G + F + HG+ +++HYAC
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDLLGR GR+ EA+ L+ MP+E + IW LL +CR HG+ L + L +L+ +
Sbjct: 420 MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSEN 479
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +V MSNIY +G + + IR+ +K +++K G SW+EI+ VH F G HP
Sbjct: 480 PVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLT 539
Query: 476 EAIFKKLEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
E I + L+E+ ++K +GYV ALHD+EEE K + L HSEKLA+ A++ G L
Sbjct: 540 EKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVC-GGLE 598
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R VIR+ KN+R+C DCH F+K S +L VVRD+NRFH F+D +CSC DYW
Sbjct: 599 EGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 207/391 (52%), Gaps = 34/391 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
DL ++N LI MY K G L A +FD M KRNVVSWTAL+ G+ Q+GN E LF +
Sbjct: 6 DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65
Query: 100 LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
L PN+F+ ++ L +C L+ G+ +H + +K D V N++I+MYSK C
Sbjct: 66 LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK-CGRI 124
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+EA +FE M RN+ISWN+MIA + E+AL LF+++Q G
Sbjct: 125 NEAACMFEVMPVRNLISWNAMIAGYTVAGF-------------CEKALVLFQKMQEVGGF 171
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF--EDDTVIANALIHAYARCGSISLSK 271
D TF+ LKAC+ L + + +H+ + GF +T +A ALI Y +CG + +++
Sbjct: 172 LDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMAR 231
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VF + ++SW +++ YA G E+++LF + ++Q D S++ +
Sbjct: 232 RVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFA 291
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
LVQ+G ++ ++ V +D C ++D+ + G I EAE+L EMP + + W+
Sbjct: 292 LVQQGKQMHAFAIK---VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPAR-NVISWT 347
Query: 387 VLLGSCRKHGETRLA--ELAATKLKQLEPGD 415
V++ KHG + A +L EP D
Sbjct: 348 VMITGYGKHGLGKEAIRLFDEMQLDSTEPDD 378
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
GF D +++N LI Y +CG + ++ VFD+M ++VSW +++ + +G E+L LF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
S M V+P+ TF + L AC + G ++ H + G ++D+ +
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQI-HDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLL 389
GRI EA + MP+ + + W+ ++
Sbjct: 121 CGRINEAACMFEVMPVR-NLISWNAMI 146
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/593 (35%), Positives = 331/593 (55%), Gaps = 33/593 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L AC G+ + + +H + I + +LFV+N LI++YA+FG L D + +FD M
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKH--GLESELFVSNKLIDLYAEFGSLKDCQKVFDRMY 309
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLF----CSLLQYFFPNEFSLASVLISCDYLHG-KL 124
R+++SW ++I Y + LF S +Q SLAS+L + +
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRS 369
Query: 125 VHALALK---FSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
V L+ F D + + NA++ MY+K D A VF + ++VISWN++I+ +
Sbjct: 370 VQGFTLRKGWFLED--ITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQ 427
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
++AIE++ M+ E + + + T+ VL AC+ R +H
Sbjct: 428 NGFASEAIEMYNIMEEEGGEI-----------SANQGTWVSVLPACSQAGALRQGMKLHG 476
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G D + +L Y +CG + + +F ++ + V WN+++ + HG ++
Sbjct: 477 RLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEK 536
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ LF M V+PD TFV+LLSACSH+GLV EG F M ++G+ P L HY CMV
Sbjct: 537 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMV 596
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DL GR G++ A I+ MP++PD+ IW LL +CR HG L ++A+ L ++EP + +
Sbjct: 597 DLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP-EHV 655
Query: 418 GF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
G+ V +SN+Y +G + IR G +RK PG S +E++N+V F +G + HP E
Sbjct: 656 GYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 715
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
++++L L +LK +GYVP+ L D+E++ KE L HSE+LA+ FA++ +
Sbjct: 716 EMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPA---- 771
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ IRI KN+R+C DCH+ K S + +EI+VRDSNRFHHFK+ +CSC DYW
Sbjct: 772 KTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 195/397 (49%), Gaps = 36/397 (9%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TLF C N++ A LH ++ N Q++ ++ L+N+Y G + AR+ FD +
Sbjct: 59 TLFRYCT---NLQSAKCLHARLV--VSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIH 113
Query: 70 KRNVVSWTALISGYAQHGNAEE---CFRLF--CSLLQYFFPNEFSLASVLISC-DYLHGK 123
R+V +W +ISGY + G + E CF LF S LQ P+ + SVL +C + G
Sbjct: 114 NRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQ---PDYRTFPSVLKACRNVTDGN 170
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACK 182
+H LALKF VYVA +LI++Y + A A +F+ M R++ SWN+MI+ +
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGY---- 226
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ N +EAL L L+ A D T +L AC +HS
Sbjct: 227 ---------CQSGNAKEALTLSDGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K+G E + ++N LI YA GS+ ++VFD+M DL+SWNSI+KAY L+ Q A+
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
LF M +QPD T +SL S S G ++ V L + + +V +
Sbjct: 334 LLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++G + A + +P D + W+ ++ ++G
Sbjct: 394 YAKLGLVDSARAVFNWLP-NKDVISWNTIISGYAQNG 429
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC+ G ++Q M+LH ++ N D+FV L +MY K G LDDA LF +
Sbjct: 455 WVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVGTSLADMYGKCGRLDDALSLFYQ 512
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV 125
+P+ N V W LI+ + HG+ E+ LF +L + P+ + ++L +C H LV
Sbjct: 513 IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS--HSGLV 569
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 314/574 (54%), Gaps = 54/574 (9%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
F +CA + Q+H + ++FV + I+MYA+ G DDA +F+EM R
Sbjct: 19 FKSCAATDGLVLGRQIHSSTARLGLD--GNVFVAHSAISMYARCGRPDDAYQMFEEMQYR 76
Query: 72 NVVSWTALISGYAQ---HGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHAL 128
+VVSW A+ISG+A G A + FR + LQ P+ ++AS+L S + V +
Sbjct: 77 DVVSWNAMISGFAHAGLFGRAMDVFRELVA-LQCPKPDAGTMASILPS---MGKARVEDI 132
Query: 129 ALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
AL VF+ M F+ +ISWN+M+A + ++ +A+
Sbjct: 133 ALLKG-------------------------VFDEMRFKGLISWNAMLAVYTNNEMHVEAV 167
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
ELF +M Q++G+ PD T + VL +C + +H +I +
Sbjct: 168 ELFMRM-------------QKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMC 214
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
++ NAL+ YA CG + ++ VFD M D+VSW SI+ AY HG +EA+ LF M
Sbjct: 215 SSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKM 274
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
++PDS FV++L+ACSHAGL+ G F+SM + P+L+HYACMVDLLGR G
Sbjct: 275 CGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGC 334
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNI 425
I EA I MP++P+ +W LLG+CR H + LAA L +L P + +V +SNI
Sbjct: 335 IREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNI 394
Query: 426 YCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEEL 485
Y +G + ++R M+ ++K PG+S E+ +RVH F G HPQ + I+KKL EL
Sbjct: 395 YARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSEL 454
Query: 486 IGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKN 545
+ +++ MGY PE LHD+EEE KE L HSEKLA+ F ++N + IRI N
Sbjct: 455 LRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNP----GTPIRITMN 510
Query: 546 IRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
+R C DCH+ KL S + G+EI+++D NR H+ K
Sbjct: 511 LRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 544
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 37/304 (12%)
Query: 208 QREGMAPDWCTFSIVLKACA---GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
Q G+ P + K+CA GLV R +HS A+ G + + +A++ I YARC
Sbjct: 4 QGPGLLPGPLHLPVGFKSCAATDGLVLGRQ---IHSSTARLGLDGNVFVAHSAISMYARC 60
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV----QPDSATFVSL 320
G + Q+F++M Y D+VSWN+++ +A G A+ +F + +PD+ T S+
Sbjct: 61 GRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASI 120
Query: 321 LSACSHAGL--VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP- 377
L + A + + VF M L + M+ + +EA +L M
Sbjct: 121 LPSMGKARVEDIALLKGVFDEMR-----FKGLISWNAMLAVYTNNEMHVEAVELFMRMQK 175
Query: 378 --MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ-MSNIYCLSGSFNK 434
+EPD+V + +L SC + L + +K+ S+ + ++Y G +
Sbjct: 176 DGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKE 235
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGY 494
AR + M V +SW I ++ G+ REAI +L ++ G G
Sbjct: 236 ARDVFDSMGTRDV-----VSWTSI------ISAYGRHGHGREAI-----DLFEKMCGQGL 279
Query: 495 VPET 498
P++
Sbjct: 280 EPDS 283
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
AT+ +C + ++HE + + + N L++MYA G L +AR +FD M
Sbjct: 186 ATVLPSCGEVSALSLGKRIHE--VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSM 243
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHA 127
R+VVSWT++IS Y +HG+ E LF + Q P+ + ++L +C + G L
Sbjct: 244 GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHA-GLLDMG 302
Query: 128 LALKFSLDAHVYVANAL------INMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFR 179
+S+ + ++A L +++ ++ C EA+ M + N W +++ A R
Sbjct: 303 KHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACR 362
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/578 (37%), Positives = 327/578 (56%), Gaps = 36/578 (6%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G IK A QL + + EP D+F N ++ Y ++ AR FD+MP ++ SW
Sbjct: 51 GKIKVARQLFDRI-----PEP-DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNT 104
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYLHGKLVHALALKFSLDAH 137
+ISG++Q+G ++ LF + P S++ + +IS G L A L
Sbjct: 105 MISGFSQNGMMDQARELFLVM-----PVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVR 159
Query: 138 VYVA-NALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKM 194
VA A+I + K E A K FE M +N+++WN+MIA + C+
Sbjct: 160 SVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQ------------ 207
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
E L LF+++ G P+ + S VL C+ L + VH LI K +
Sbjct: 208 --AENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAG 265
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
+L+ Y +CG + + ++F M D+V+WN+++ YA HG ++AL LF M ++
Sbjct: 266 TSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMK 325
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
PD TFV++LSAC+HAG V G + F+SM+ ++GV + DHY C+VDLLGR G+++EA
Sbjct: 326 PDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVD 385
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
LI++MP +P S I+ LLG+CR H LAE AA L L+P + G+VQ++N+Y
Sbjct: 386 LIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNR 445
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG 491
++ ++R+ MK ++V K PG SWIE+++ VHEF SG + HP+ I +KL EL +++
Sbjct: 446 WDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRL 505
Query: 492 MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GYVP+ ALHD+ EE K++ L HSEKLA+ + ++ + IR+ KN+R+C D
Sbjct: 506 AGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPL----GTPIRVFKNLRVCGD 561
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH+ K S + G+ I+VRD+ RFHHF+ CSC DYW
Sbjct: 562 CHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA-LHGQAKEALQLFSNM 308
+ + +N +I + R G ++ + +VF+ MT V+WNS+L Y+ G+ K A QLF +
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+PD ++ +L+ H V+ F M V + M+ + G + +
Sbjct: 64 P-EPDIFSYNIMLACYLHNADVESARLFFDQM-----PVKDTASWNTMISGFSQNGMMDQ 117
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
A +L MP+ +SV W+ ++ + G+ LA+
Sbjct: 118 ARELFLVMPVR-NSVSWNAMISGYVESGDLDLAK 150
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/560 (36%), Positives = 311/560 (55%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+L + N L+ MY KFG +D+A+ + MP+R+VV+W ALI G+A + + F +
Sbjct: 584 NLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMR 643
Query: 101 -QYFFPNEFSLASVLISC---DYL--HGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
+ N ++ ++L +C DYL HG +HA + + YV ++LI MY++ C D
Sbjct: 644 REGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQ-CGD 702
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+ +F+ + +N +WN++ +A +A++ A+M+N+ G+
Sbjct: 703 LNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRND-------------GV 749
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D +FS+ L L +HS I K GFE D + NA + Y +CG I +
Sbjct: 750 DLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFR 809
Query: 273 VFDKMTYHDLVSWNSILKAYALHG---QAKEALQLFSNMNVQPDSATFVSLLSACSHAGL 329
+ SWN ++ A A HG QA EA ++ ++PD TFVSLLSACSH GL
Sbjct: 810 ILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGL 869
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V EG F SM GV ++H C++DLLGR GR+ EAE I +MP+ P+ +W LL
Sbjct: 870 VDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLL 929
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+C+ HG L AA +L +L D +V SN+ + + +RK+M+ ++K
Sbjct: 930 AACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKK 989
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
P SWI+++N+V F G + HPQ I+ KLEEL + G++P+TS AL D +EE
Sbjct: 990 KPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQ 1049
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE L++HSE++AL F ++N E S +RI KN+R+C DCH+ KL S ++G++IVV
Sbjct: 1050 KEHNLWNHSERIALAFGLINSA----EGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVV 1105
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RDS RFHHF CSC+DYW
Sbjct: 1106 RDSYRFHHFHGGKCSCSDYW 1125
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 199/399 (49%), Gaps = 31/399 (7%)
Query: 4 STQIYATLFHACALHGNIKQ-AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
S+ + A++ AC G + + A Q+H +++ ++FV L++ Y G + +A
Sbjct: 247 SSYVIASMVTACDRSGCMTEGARQIHGYVVK--CGLMSNVFVGTSLLHFYGTHGSVSEAN 304
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC---- 117
LF+E+ + N+VSWT+L+ YA +G+ +E ++ L ++A+V+ +C
Sbjct: 305 KLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFG 364
Query: 118 DYLHGKLVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
D G + +K LD + V VAN+LI+M+ +EA +VF NM+ R+ ISWNS+I
Sbjct: 365 DKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSII 424
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
A A EE+L F ++R D+ T S +L AC +
Sbjct: 425 TAS-------------AHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWG 471
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H LI K G E + + N+L+ YA+ GS ++ VF M DL+SWNS++ ++
Sbjct: 472 RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVED 531
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G+ A+ L M + TF + LSAC + E K+ H+ + + V L
Sbjct: 532 GKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL----EKLKIVHAFVIHFAVHHNLII 587
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+V + G+ G + EA+K+ + MP E D V W+ L+G
Sbjct: 588 GNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIGG 625
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 203/409 (49%), Gaps = 30/409 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q+ F TN L+NMY+KFG + A+H+FD+M RN SW +ISG+ + G + + FC +
Sbjct: 180 QNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHM 239
Query: 100 LQY-FFPNEFSLASVLISCDYL-----HGKLVHALALKFSLDAHVYVANALINMY-SKSC 152
+ P+ + +AS++ +CD + +H +K L ++V+V +L++ Y +
Sbjct: 240 FENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGS 299
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
EA K+FE +E N++SW S++ +A + +E L ++R L+ G+
Sbjct: 300 VSEANKLFEEIEEPNIVSWTSLMVC-------------YADNGHTKEVLNIYRHLRHNGL 346
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSK 271
T + V++ C + + + K G + +V +AN+LI + S+ +
Sbjct: 347 ICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEAS 406
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VF+ M D +SWNSI+ A A +G+ +E+L F M + + D T +LL AC A
Sbjct: 407 RVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQ 466
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
++ G + H ++ G+ + ++ + + G +AE + MP D + W+ +
Sbjct: 467 HLKWG-RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR-DLISWNSM 524
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
+ S + G+ A L ++ L+ ++ +V + LS +N +L
Sbjct: 525 MASHVEDGKYSHAILLLVEM--LKTRKAMNYVTFTT--ALSACYNLEKL 569
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK +HAL +K + + + N L+NMYSK A VF+ M RN SWN+MI+ F
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAV 238
+A++ F M G+ P + ++ AC +G +TE A +
Sbjct: 226 VGWYHKAMQFFCHMF-------------ENGVTPSSYVIASMVTACDRSGCMTEG-ARQI 271
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + K G + + +L+H Y GS+S + ++F+++ ++VSW S++ YA +G
Sbjct: 272 HGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHT 331
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
KE L ++ ++ + T +++ C G G ++ ++++ +
Sbjct: 332 KEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANS 391
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ + G + EA ++ M E D++ W+ ++ + +G
Sbjct: 392 LISMFGNYDSVEEASRVFNNM-QERDTISWNSIITASAHNG 431
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
A+H+L K + +T N L++ Y++ GSI ++ VFDKM + SWN+++ +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G +A+Q F +M V P S S+++AC +G + EG + H + G++ +
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
++ G G + EA KL E+ EP+ V W+ L+ +G T+
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLMVCYADNGHTK 332
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/593 (34%), Positives = 340/593 (57%), Gaps = 30/593 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I+AT+ +C+ G + + Q H + + + Q +V N LI MY++ + A ++
Sbjct: 131 IFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQ--YVKNALICMYSRRSDVKGAMSVWY 188
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH---- 121
E+P +V S+ +I+G ++G E + ++ + + + + C +L
Sbjct: 189 EVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRL 248
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G VH + + +V++A+I+MY K C + A KVF ++ +NV+SW +++AA+
Sbjct: 249 GLQVHCRMFRTGAEYDSFVSSAIIDMYGK-CGNILNARKVFNRLQTKNVVSWTAILAAY- 306
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
++ EEAL F +++ +G+ P+ TF+++L +CAG+ H +H
Sbjct: 307 ------------SQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLH 354
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ I K GFED ++ NALI+ Y++ GSI + +VF +M D ++W++++ + HG +
Sbjct: 355 TRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGR 414
Query: 300 EALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL +F M P TFV +LSAC+H G VQEG + +++ G+ P ++HY C+
Sbjct: 415 EALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCI 474
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
V LL + GR+ EAE ++ P++ D V W LL +C H L + A + Q++PGD
Sbjct: 475 VGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDV 534
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ +SN+Y + ++ IRK M+ V+K PG SWIEI N +H F S GK HP+
Sbjct: 535 GTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESN 594
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I++K++EL+ ++ MGYVP+ + HD+E+E K E + +HSEKLA+ + +M S
Sbjct: 595 QIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPS---- 650
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+R+CVDCH+ +KL S + + I+VRD+NRFH F D CSC DYW
Sbjct: 651 GAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 197/392 (50%), Gaps = 25/392 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+K +H H+I ++ N LIN+YAK + AR LFD M KRNVVSW AL
Sbjct: 40 NLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGAL 99
Query: 80 ISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCD----YLHGKLVHALALKFS 133
++GY +G E RLF +++ Y PNE+ A+++ SC + G H ALK
Sbjct: 100 MAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSG 159
Query: 134 LDAHVYVANALINMYS-KSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
L H YV NALI MYS +S A V+ + +V S+N +I ++A+E+
Sbjct: 160 LVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLD 219
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+M + E + D T+ C+ L R VH + + G E D+
Sbjct: 220 RMVD-------------ECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSF 266
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ- 311
+++A+I Y +CG+I +++VF+++ ++VSW +IL AY+ +G +EAL F M V
Sbjct: 267 VSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDG 326
Query: 312 --PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
P+ TF LL++C+ + G K+ H+ ++ G + ++++ + G I A
Sbjct: 327 LLPNEYTFAVLLNSCAGISALGHG-KLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAA 385
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
K+ EM DS+ WS ++ HG R A
Sbjct: 386 HKVFLEMICR-DSITWSAMICGLSHHGLGREA 416
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/478 (40%), Positives = 294/478 (61%), Gaps = 24/478 (5%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
D G+ +H++ ++ + +YV N+L+++Y+ +C D A+KVF+ M +++++WNS+I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
F A+ EEAL L+ ++ +G+ PD T +L ACA +
Sbjct: 62 NGF-------------AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
VH + K G + +N L+ YARCG + +K +FD+M + VSW S++ A++
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 296 GQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
G KEA++LF M + P TFV +L ACSH G+V+EG + F M E + + P+++
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 228
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
H+ CMVDLL R G++ +A + I+ MPM+P+ VIW LLG+C HG++ LAE A ++ QL
Sbjct: 229 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 288
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP S +V +SN+Y ++ + IRK+M V+K PG S +E+ NRVHEF G K
Sbjct: 289 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 348
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HPQ +AI+ KL+E+ G+L+ GYVP+ S D+EEE KE + +HSEK+A+ F +++
Sbjct: 349 HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLIST- 407
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
ERS I ++KN+R+C DCH +KL S + +EIVVRD +RFHHFK+ CSC DYW
Sbjct: 408 ---PERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 146/291 (50%), Gaps = 23/291 (7%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-L 100
++V N L+++YA G + A +FD+MP++++V+W ++I+G+A++G EE L+ +
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 101 QYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
+ P+ F++ S+L +C + GK VH +K L +++ +N L+++Y++ +E
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A +F+ M +N +SW S+I +AIELF M++ EG+ P
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST------------EGLLPC 190
Query: 216 WCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
TF +L AC+ G+V E + +Y E ++ AR G + + +
Sbjct: 191 EITFVGILYACSHCGMVKEGF-EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 249
Query: 274 FDKMTYH-DLVSWNSILKAYALHGQAKEA-LQLFSNMNVQPDSATFVSLLS 322
M ++V W ++L A +HG + A + ++P+ + LLS
Sbjct: 250 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+L ACA G + ++H +MI ++L +N L+++YA+ G +++A+ LFDEM
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIK--VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNEFSLASVLISCDYLHGKLV- 125
+N VSWT+LI G A +G +E LF + + P E + +L +C H +V
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS--HCGMVK 208
Query: 126 ------HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFR-NVISWNSMIAA 177
+ ++ ++ + ++++ +++ +A++ ++M + NV+ W +++ A
Sbjct: 209 EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 268
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/565 (36%), Positives = 322/565 (56%), Gaps = 41/565 (7%)
Query: 40 QDLFV-TNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-- 96
QD V T L++MY+K G L+++ F+ M + N VSW A+I+ +A+H E R
Sbjct: 168 QDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQK 227
Query: 97 --------CSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMY 148
CS+ + + S L S Y+H + L F D V N ++NMY
Sbjct: 228 MFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCI---LRTGFDQD----VVNVILNMY 280
Query: 149 SK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K C +A +F++M +VI+WN+MIAA+ ++ + EAL + +
Sbjct: 281 GKCGCLQDAEAMFKSMSQPDVIAWNTMIAAY-------------SQHGHTSEALRFYELM 327
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
Q EG+ PD T+ V+ ACA L VH + F+ T +AN+L++ Y +CG +
Sbjct: 328 QEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQV-TELANSLVNMYGKCGIL 386
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSAC 324
+++ +FDK T V+WN+++ AYA H ++A +LF M + +P TF+S+LSAC
Sbjct: 387 DVARSIFDK-TAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSAC 445
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
++AGL +E + F M ++HGV P HY CMV+ LG+ GR+ +AE LI+ MP EPD +
Sbjct: 446 ANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLT 505
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W+ L +CR HG+ + + AA +++P S G+V ++ I+ +G F +A IRK M
Sbjct: 506 WTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLD 565
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
+RK G S I++ V+EF +G + +P+ + IF +L+ L ++K GY P+ + HD
Sbjct: 566 RGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHD 625
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
+E KE L+ HSE+LA+ F I++ + + +RIMKN+R+C DCH KL S +
Sbjct: 626 VEAGQKEPLLFAHSERLAIAFGIISTS----QGTPLRIMKNLRVCGDCHAMTKLTSKITR 681
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRDSNRFHHFK+ CSC D+W
Sbjct: 682 REIIVRDSNRFHHFKNGSCSCKDFW 706
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 214/395 (54%), Gaps = 31/395 (7%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ +CA G + + ++H+ +I D++V+NHL+ MY K G L++AR +F+ P
Sbjct: 40 VIQSCARLGALAEGRRIHQ-LIRRV-GLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLH-GKL 124
+NV SWT LI+ AQHG ++E LF +L Q P+ S + + +C ++L G+
Sbjct: 98 KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+HAL ++ V +L++MYSK + +E+ K FE+M N +SWN+MIAA
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAA------ 211
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
FA+ + EAL +++ EG+ T+ ++ A + A +H I
Sbjct: 212 -------FAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCIL 264
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ GF+ D V N +++ Y +CG + ++ +F M+ D+++WN+++ AY+ HG EAL+
Sbjct: 265 RTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALR 322
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
+ M V PD T+VS++ AC+ G ++ G +V + + V +L + +V++
Sbjct: 323 FYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELAN--SLVNMY 380
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
G+ G IL+ + I + + SV W+ ++G+ +H
Sbjct: 381 GKCG-ILDVARSIFDKTAK-GSVTWNAMIGAYAQH 413
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 153/295 (51%), Gaps = 26/295 (8%)
Query: 113 VLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRN 167
V+ SC L G+ +H L + L + VYV+N L+ MY K + +EA VFE +N
Sbjct: 40 VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC- 226
V SW +I + A+ +EAL LF ++ ++G+ P +F+ + AC
Sbjct: 100 VFSWTILIT-------------VCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACS 146
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
AG A+H+L+ +YGF+D V +L+ Y++CGS+ S + F+ MT + VSWN
Sbjct: 147 AGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWN 206
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
+++ A+A H + EAL+ M ++ S T+++L+SA ++ + H +
Sbjct: 207 AMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSA-RYIHDCILR 265
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
G D ++++ G+ G + +AE + + M +PD + W+ ++ + +HG T
Sbjct: 266 TGF--DQDVVNVILNMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAAYSQHGHT 317
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ ACA G+++ Q+H + + Q + N L+NMY K G LD AR +FD+
Sbjct: 339 YVSVIDACATLGDMEVGKQVHRRLGD---RAFQVTELANSLVNMYGKCGILDVARSIFDK 395
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC 117
K V+W A+I YAQH + ++ F LF + L P+ + SVL +C
Sbjct: 396 TAK-GSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSAC 445
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/587 (36%), Positives = 322/587 (54%), Gaps = 63/587 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHM-INNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
Y T+ + N+++A E M I + P+ N +I +A+ +D AR LF
Sbjct: 41 YNTMLSCYVRNSNMERAQAFFEDMPIKDTPS-------WNTMITGFAQNQQMDKARDLFL 93
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVH 126
MP +NVV+W A+ISGY + G+ + S L+ F F
Sbjct: 94 IMPTKNVVTWNAMISGYVECGDLD-------SALKLFEKAPFK----------------- 129
Query: 127 ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
V A+I Y K A ++FE M +N+++WN+MIA +
Sbjct: 130 ----------SVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGY------- 172
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ E+ + LFR + G+ P+ T S L C+ L + VH L+ K
Sbjct: 173 ------IENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKS 226
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
DDT +LI Y +CG + ++F ++ D+V+WN+++ YA HG+ K+AL LF
Sbjct: 227 PLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLF 286
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M ++PD TFV++L AC+HAG G K FHSM +++G+V + DHY CMVDLLGR
Sbjct: 287 DEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGR 346
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G+++EA LI +MP +P + ++ LLG+CR H T +AE A+ KL L+P + G+VQ+
Sbjct: 347 AGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQL 406
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
+N+Y + ++ +RK MK +V K PG SWIE+++ H+F SG K HP+ +I KL
Sbjct: 407 ANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKL 466
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
+EL ++K GYVP+ ALHD+ EE KE+ L HSEKLA+ + ++ + IR+
Sbjct: 467 KELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIK----LPPGTPIRV 522
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+R+C DCH +K S + +EI+VRD+ RFHHFKD CSC DYW
Sbjct: 523 FKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 322/581 (55%), Gaps = 56/581 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ ACA + + ++H + + E +LFV N L+++Y K G A+ LFDE
Sbjct: 130 FTSVLKACAGLAQVLEGQKVH-CFVTKYGCE-SNLFVRNSLVDLYFKVGCNCIAQKLFDE 187
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
M R+VVSW LISGY G ++ +F +++ N S ++++
Sbjct: 188 MVVRDVVSWNTLISGYCFSGMVDKARMVFDGMME---KNLVSWSTMI------------- 231
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
+ V N +EA ++FENM RNV+SWN+MIA + + A A
Sbjct: 232 -------SGYARVGNL----------EEARQLFENMPMRNVVSWNAMIAGYAQNEKYADA 274
Query: 188 IELFAKMKNEEEALFLFRQLQREG-MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
IELF RQ+Q EG +AP+ T VL ACA L +H I +
Sbjct: 275 IELF-------------RQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNK 321
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
E + NAL YA+CG + +K VF +M D++SW+ I+ A++G A EA F+
Sbjct: 322 IEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFA 381
Query: 307 NM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M ++P+ +F+ LL+AC+HAGLV +G + F M + +G+ P+++HY C+VDLL R
Sbjct: 382 EMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRA 441
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
GR+ +AE LI MPM+P+ ++W LLG CR + + E ++ +L+ S V ++
Sbjct: 442 GRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLA 501
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
N+Y G + A R M+ ++ K PG SWIEI N V+EF G HPQ I+ +
Sbjct: 502 NVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIR 561
Query: 484 ELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIM 543
EL ++K GY P+T L +H+I+EE KE+ L HSEKLAL F ++N E + IRI+
Sbjct: 562 ELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTS----EGTTIRIV 617
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
KN+R+C DCH+ +K+ S ++ +EIVVRD +RFHHFKD CS
Sbjct: 618 KNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 135/286 (47%), Gaps = 24/286 (8%)
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
+ F N+ ++N+++ AF I F N + L PD TF+ V
Sbjct: 85 LSFPNIFAYNALLKAFSQHNAWHTTISYF----NNQLVL-------PNAPNPDEYTFTSV 133
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
LKACAGL VH + KYG E + + N+L+ Y + G +++++FD+M D+
Sbjct: 134 LKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDV 193
Query: 283 VSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
VSWN+++ Y G +A +F M ++ + ++ +++S + G ++E ++F +M
Sbjct: 194 VSWNTLISGYCFSGMVDKARMVFDGM-MEKNLVSWSTMISGYARVGNLEEARQLFENMPM 252
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME----PDSVIWSVLLGSCRKHGET 398
+ V + M+ + + +A +L R+M E P+ V +L +C G
Sbjct: 253 RNVV-----SWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGAL 307
Query: 399 RLAELAATKLK--QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
L + ++ ++E G LG ++++Y G +A+ + EM
Sbjct: 308 DLGKWIHRFIRRNKIEVGLFLGNA-LADMYAKCGCVLEAKGVFHEM 352
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/608 (35%), Positives = 329/608 (54%), Gaps = 46/608 (7%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
F A LH I ++ H H FP LI+ Y K G L DA LFD +P++
Sbjct: 25 FIAKKLHAQIIKSGLNHHH---PFPKT---------LIDAYGKCGLLKDALKLFDALPQQ 72
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH------GKL 124
+ V+W ++S + F + +L + P+ F +S++ +C L GK
Sbjct: 73 DHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQ 132
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+HA L V ++L++MY+K D VF+++ + ISW +MI+ +
Sbjct: 133 LHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGR 192
Query: 184 EAQAIELF------------------AKMKNEEEALFLFRQLQREGMA-PDWCTFSIVLK 224
+ +A+ELF + N +AL+LF +++REG++ D S V+
Sbjct: 193 KLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVG 252
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
ACA VH ++ G+E I+NAL+ YA+C + +K +F +M D+VS
Sbjct: 253 ACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVS 312
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W SI+ A HG A+EAL L+ +M V+P+ TFV L+ ACSH GLV +G +F SM+
Sbjct: 313 WTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMV 372
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
E+ G+ P L HY C++DL R G + EAE LIR MP++PD W+ LL +C+ HG T++A
Sbjct: 373 EDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMA 432
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
A L L+P D ++ +SNIY +G + ++RK M V+K PG S +++
Sbjct: 433 VRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGRE 492
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
F +G P ++ I + +L +++ GYVP+TS L D++++ KE QL+ HSE+L
Sbjct: 493 FQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERL 552
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
AL + ++ + IRI+KN+R+C DCH +KL S + +EI VRD R+HHFKD
Sbjct: 553 ALAYGLLK----AVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDG 608
Query: 582 ICSCNDYW 589
CSCND+W
Sbjct: 609 KCSCNDFW 616
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 318/564 (56%), Gaps = 32/564 (5%)
Query: 39 PQDLFVTNHLI-NMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
PQ+ HLI + + + A +F+++ N+ +W +I G+A+ N LF
Sbjct: 65 PQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFS 124
Query: 98 ------SLL--QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYS 149
S+L + FP F + L+ D G+ +H++ ++ D+ +V N+L++MYS
Sbjct: 125 QMHAASSILPDTHTFPFLFKAVAKLM--DVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS 182
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
A++VFE M +R+ ++WNS+I F M NE AL L+R++
Sbjct: 183 VLGSLXSAYQVFEIMSYRDRVAWNSVINGFA-----------LNGMPNE--ALTLYREMG 229
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
EG+ PD T +L AC L VH + K G + +NAL+ Y++CG+
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACS 325
+++VFD+M +VSW S++ A++G EAL+LF + Q P TFV +L ACS
Sbjct: 290 DAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H G++ EG F M E +G++P+++H+ CMVDLL R G++ +A IR MP+ P++VIW
Sbjct: 350 HCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIW 409
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG+C HG L E+A ++++LE S FV +SN+Y + + +RK M
Sbjct: 410 RTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMK 469
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K PG S +E++NRV+EF G + HPQ E + L ++ LK GYVP T L DI
Sbjct: 470 GVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADI 529
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
EEE KE L HH+EK+A+ F ++N + IRIMKN+R+C DCH +KL S + +
Sbjct: 530 EEEEKETALSHHTEKVAIAFMLVNTPP----GTPIRIMKNLRVCADCHLAIKLISKVFER 585
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI+VRD +RFHHFKD CSC DYW
Sbjct: 586 EIIVRDRSRFHHFKDGSCSCKDYW 609
>gi|357115878|ref|XP_003559712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 650
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/601 (34%), Positives = 325/601 (54%), Gaps = 33/601 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLH-EHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
+ ++++ LF A A + QLH + ++ F ++ + + ++N YA D AR
Sbjct: 68 TPRLFSALFKA-ASSASPSMGAQLHAQAVVRGFLDDAGSIILPTAILNFYASCREPDLAR 126
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLIS---- 116
+FD M N V+W ALI GYAQ G EE LF ++ + + P+ ++ ++L
Sbjct: 127 RVFDAMACTNAVTWNALIKGYAQAGRREEALELFLAMRRQSHVAPDRYTFPALLSGIGRE 186
Query: 117 ----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISW 171
C G VH A+K L+ +V +L++MY+ A DE VF++++ + + W
Sbjct: 187 QGGGCMQELGGAVHGQAIKSGLNRDPFVGASLVSMYAARGALDEVKVVFDDVDTLDPVVW 246
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
+S+I+A+ CK EE AL F ++ + P +S + C +
Sbjct: 247 SSLISAYVNCK-------------EEEGALLTFYRMLCRDIKPRQFVYSSMFAVCGSMSM 293
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
VH+ K + D + NAL+ Y+ CG I + +VF+ D+VS+NSI+ A
Sbjct: 294 LEMGRQVHAHSLKSNTDKDAAMTNALLTMYSDCGCIRDALRVFNSNDIVDVVSYNSIILA 353
Query: 292 YALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
HG KEA +L+ MN + PD T ++LLSA +HAGLV EG +F+SML+ G+ P
Sbjct: 354 LGQHGHPKEATELYRQMNCAGLMPDDVTLLNLLSAFNHAGLVHEGLHIFNSMLDMEGIKP 413
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
HYAC+ D+L R G+I EA K I EMP E ++ +W ++LG+C KH + R A L
Sbjct: 414 TYQHYACVADMLARSGQIGEAMKTIYEMPFEAEAPLWRIILGACSKHRDIRTGTKIAEML 473
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
++EP ++ ++ + NIY G + +A +R M+ + + SWIEI R H F
Sbjct: 474 FEMEPYEATNYILLGNIYTRLGRWTEAEKVRNMMEKRGIDRDDAFSWIEISQRTHRFGVD 533
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+ HP I++ L+ LIG +K GYVP+ S A H+I+++ +EE L++H EKLA F +
Sbjct: 534 DRSHPISREIYRNLDRLIGSIKVAGYVPDISFAAHNIKKDRREESLHYHCEKLAFAFGDL 593
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
S +RIMKN+R+C DCH K S + G+EI++RD++RFHHF CSC DY
Sbjct: 594 ATPS----GDTLRIMKNLRVCGDCHCAYKYFSLITGREIILRDNHRFHHFNKGACSCGDY 649
Query: 589 W 589
W
Sbjct: 650 W 650
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 332/594 (55%), Gaps = 39/594 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + + C G + QA +L M +D+ N +++ Y +FG +DDA LF +
Sbjct: 131 WTAMVNGCFRFGMVDQAERLFCQM------PVKDIAAWNAMVHGYLQFGKVDDALKLFKQ 184
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF-SLASVLISCD----YLHG 122
MP++NV+SWT +I G Q+ + E LF ++L+ + + V+ +C + G
Sbjct: 185 MPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMG 244
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRA 180
VH +K YV +LI +Y+ +C +++ KVF M V W ++++ +
Sbjct: 245 TQVHGFIIKSGFLYEEYVTASLITLYA-NCKRTEDSRKVFGEMVHEKVAVWTALLSGY-- 301
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + E+AL +F ++ R + P+ TF+ L +C+ L T +H
Sbjct: 302 -----------SLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHG 350
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G + N+L+ Y+ G+++ + VF ++ +VSWNSI+ A HG+ K
Sbjct: 351 VAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKW 410
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE--NHGVVPQLDHYAC 355
A +F M N +PD TF LLSACSH G +Q+G K+F+ + NH + ++ HY C
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNH-IDRKIQHYTC 469
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVD+LGR G + EAEKLI M ++P+ ++W LL +CR H + E AA + L+
Sbjct: 470 MVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S +V +SNIY +G ++ +R +MK + K PG SW+ I + HEF SG + H R
Sbjct: 530 SAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCLR 589
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
IF+KLE L +LK +GYVP+ ALHD+E+E KEE L++HSE+LA+ F ++N
Sbjct: 590 --IFEKLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINT----V 643
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E S + +MKN+R+C DCH +KL S ++G +IV+RD RFHHFK+ +CSC DYW
Sbjct: 644 EGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 205/429 (47%), Gaps = 48/429 (11%)
Query: 30 HMINNFPNEPQDLF---------VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
H++N +E +++F + +I+ Y + L DA +LFDEMP R+VVSW ++I
Sbjct: 45 HLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMI 104
Query: 81 SGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYV 140
SG + G+ + ++F + + + S +++ C + G + A L +
Sbjct: 105 SGCVECGDIDTAVKMFDEMPE---RSVVSWTAMVNGC-FRFGMVDQAERLFCQMPVKDIA 160
Query: 141 A-NALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
A NA+++ Y + D+A K+F+ M +NVISW +MI C L+ +
Sbjct: 161 AWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMI-----CGLDQN--------ERSG 207
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EAL LF+ + R + TF+ V+ ACA + VH I K GF + + +LI
Sbjct: 208 EALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLI 267
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
YA C S++VF +M + + W ++L Y+L+ + ++AL +FS M ++ P+ +
Sbjct: 268 TLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQS 327
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC------MVDLLGRVGRILEA 369
TF S L++CS G + G ++ HGV +L +V + G + +A
Sbjct: 328 TFASGLNSCSALGTLDWGKEI-------HGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDA 380
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL--EPGDSLGFVQMSNIYC 427
+ E+ + V W+ ++ C +HG + A + ++ +L EP D + F + +
Sbjct: 381 VSVFIEI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP-DEITFTGLLSACS 438
Query: 428 LSGSFNKAR 436
G K R
Sbjct: 439 HCGFLQKGR 447
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/617 (33%), Positives = 335/617 (54%), Gaps = 38/617 (6%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+++Y+ C +I M++H +I D+++ L+N Y + L+ A +
Sbjct: 523 SEVYSVALKTCTRVMDIWLGMEIHGCLIKR--GFDLDVYLRCALMNFYGRCWGLEKANQV 580
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFS-----LASVLISCDY 119
F EMP + W I Q ++ LF + F E + L + + +
Sbjct: 581 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGF 640
Query: 120 LH-GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAA 177
L+ GK H L+ D VYV +LI+MY K+ A VF+NM+ RN+ +WNS+++
Sbjct: 641 LNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSG 700
Query: 178 FRACKLEAQAIELFAKMKNE----------------------EEALFLFRQLQREGMAPD 215
+ + A+ L +M+ E +EAL F Q+Q+EG+ P+
Sbjct: 701 YSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPN 760
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+ + +L+ACA L + +H L + GF +D +A ALI Y++ S+ + +VF
Sbjct: 761 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 820
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
++ L SWN ++ +A+ G KEA+ +F+ M V PD+ TF +LLSAC ++GL+ E
Sbjct: 821 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGE 880
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G K F SM+ ++ +VP+L+HY CMVDLLGR G + EA LI MP++PD+ IW LLGSC
Sbjct: 881 GWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 940
Query: 393 RKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPG 452
R H + AE AA L +LEP +S ++ M N+Y + + +R+ M + VR
Sbjct: 941 RIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQV 1000
Query: 453 LSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE 512
SWI+I RVH F+S K HP I+ +L +L+ ++K +GYVP+ + +++E K++
Sbjct: 1001 WSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQK 1060
Query: 513 QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
L H+EKLA+ + ++ + IR++KN RIC DCH+ K S + +E+ +RD
Sbjct: 1061 ILLSHTEKLAITYGLIKM----KAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDG 1116
Query: 573 NRFHHFKDRICSCNDYW 589
RFHHF++ CSCND+W
Sbjct: 1117 VRFHHFREGKCSCNDFW 1133
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 166 RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
RN + WNS + F++ A ++ + L +F++L +G+ D +S+ LK
Sbjct: 485 RNYLKWNSFVEEFKS---SAGSLHI---------VLEVFKELHGKGVVFDSEVYSVALKT 532
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
C ++ +H + K GF+ D + AL++ Y RC + + QVF +M + + W
Sbjct: 533 CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLW 592
Query: 286 NSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSAC-SHAGLVQEGNKVFHSML 341
N + + ++ ++LF M ++ ++AT V +L A S G + G + +L
Sbjct: 593 NEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVL 652
Query: 342 EN 343
N
Sbjct: 653 RN 654
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 296/514 (57%), Gaps = 34/514 (6%)
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ F+L VL SC L G+ VH L+ L+ YV +LI+MY K +A K+F
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEALF 202
+ M R++ SWN++IA + A +LF +M++ E+AL
Sbjct: 166 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALG 225
Query: 203 LFRQLQREG--MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
LF ++ ++G M P+W T VL ACA +H G ++ + AL
Sbjct: 226 LFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGM 285
Query: 261 YARCGSISLSKQVFDKMTYH--DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
YA+C S+ ++ FD + + +L++WN+++ AYA HG EA+ +F NM VQPD+
Sbjct: 286 YAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAV 345
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF+ LLS CSH+GL+ G F+ M H V P+++HYAC+VDLLGR GR++EA++LI +
Sbjct: 346 TFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQ 405
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MPM+ +W LL +CR H +AELAA +L LEP +S +V +SN+Y +G + +
Sbjct: 406 MPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEV 465
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
+ +R +K ++K PG SWIEI + H F K HPQ + I+K LE L ++K GY+
Sbjct: 466 KKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYI 525
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNF 555
P+TS LHDI EE KE L HSEKLA+ F ++N R V+R+ KN+RIC DCH
Sbjct: 526 PDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNT----RPGVVLRVTKNLRICGDCHAA 581
Query: 556 MKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S + +EI+VRD NRFH FKD CSC DYW
Sbjct: 582 TKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 162/353 (45%), Gaps = 56/353 (15%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G I A +L + MI +D+ N LI Y K G + A LF+ M RN+VSWTA
Sbjct: 156 GVIGDARKLFDKMI------VRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTA 209
Query: 79 LISGYAQHGNAEECFRLFCSLLQ---YFFPNEFSLASVLISCDYL----HGKLVHALALK 131
+ISGY Q+G AE+ LF +LQ PN ++ SVL +C G+ +H A
Sbjct: 210 MISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANG 269
Query: 132 FSLDAHVYVANALINMYSKSCA-DEAWKVFENM--EFRNVISWNSMIAAF--RACKLEAQ 186
L + V AL MY+K + EA F+ + +N+I+WN+MI A+ C +EA
Sbjct: 270 IGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAV 329
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC-------AGLVTERHASAVH 239
+I F + R G+ PD TF +L C AGL +H
Sbjct: 330 SI---------------FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIH 374
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQA 298
S+ + E + + L R G + +K++ +M S W ++L A H
Sbjct: 375 SVEPR--VEHYACVVDLL----GRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNL 428
Query: 299 K----EALQLFSNMNVQPD-SATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
+ A +LF ++PD S +V L + + AG+ +E K+ ++L+ G+
Sbjct: 429 EIAELAARRLFV---LEPDNSGNYVLLSNLYAEAGMWEEVKKL-RALLKYQGM 477
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ D T VLK+CA L VH + G E D + +LI Y +CG I +
Sbjct: 102 GLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDA 161
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLV 330
+++FDKM D+ SWN+++ Y G+ A LF M + ++ +++S + G
Sbjct: 162 RKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME-HRNIVSWTAMISGYTQNGFA 220
Query: 331 QEGNKVFHSMLEN 343
++ +F ML++
Sbjct: 221 EQALGLFDEMLQD 233
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/559 (37%), Positives = 325/559 (58%), Gaps = 27/559 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV N L+ +YAK G++ A+ +FD + R +VSWT++ISGYAQ+G A E R+F +
Sbjct: 187 SDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQM 246
Query: 100 LQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
P+ +L S+L + D G+ +H +K L+ + +L Y+K
Sbjct: 247 RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLV 306
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A F+ M+ NVI WN+MI+ + AK + EEA+ LF + +
Sbjct: 307 TVAKSFFDQMKTTNVIMWNAMISGY-------------AKNGHAEEAVNLFHYMISRNIK 353
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T + A A + + A + ++K + D + +LI YA+CGS+ +++V
Sbjct: 354 PDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRV 413
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
FD+ + D+V W++++ Y LHGQ EA+ L+ M V P+ TF+ LL+AC+H+GLV
Sbjct: 414 FDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLV 473
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG ++FH M ++ +VP+ +HY+C+VDLLGR G + EA I ++P+EP +W LL
Sbjct: 474 KEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLS 532
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+C+ + L E AA KL L+P ++ +VQ+SN+Y S ++ +R M+ + K
Sbjct: 533 ACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKD 592
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G S IEI ++ F G K HP + IF +L+ L +LK +G+VP T LHD+ E K
Sbjct: 593 LGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEK 652
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE L HSE++A+ + +++ + +RI KN+R CV+CH+ +KL S L+ +EI+VR
Sbjct: 653 EENLSFHSERIAVAYGLISTA----PGTTLRITKNLRACVNCHSAIKLISKLVEREIIVR 708
Query: 571 DSNRFHHFKDRICSCNDYW 589
D+NRFHHFKD +CSC DYW
Sbjct: 709 DANRFHHFKDGLCSCGDYW 727
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 176/365 (48%), Gaps = 26/365 (7%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
F+ L+N + G + AR LFDE +V W A+I Y+++ + ++ +
Sbjct: 89 FLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWT 148
Query: 102 YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DE 155
P+ F+ VL +C D+ ++H +K+ + V+V N L+ +Y+K C
Sbjct: 149 GVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAK-CGHIGV 207
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A VF+ + R ++SW S+I+ +A+ EAL +F Q++ G+ PD
Sbjct: 208 AKVVFDGLYHRTIVSWTSIISG-------------YAQNGKAVEALRMFSQMRNNGVKPD 254
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
W +L+A + ++H + K G ED+ + +L YA+CG ++++K FD
Sbjct: 255 WIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFD 314
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+M +++ WN+++ YA +G A+EA+ LF M N++PDS T S + A + G + E
Sbjct: 315 QMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSL-E 373
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ + + ++D+ + G + E + + + + D V+WS ++
Sbjct: 374 LAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSV-EFARRVFDRNSDKDVVMWSAMIMGY 432
Query: 393 RKHGE 397
HG+
Sbjct: 433 GLHGQ 437
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
A A G+++ A + +++ + N D+FV LI+MYAK G ++ AR +FD ++V
Sbjct: 365 ASAQVGSLELAQWMDDYVSKS--NYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDV 422
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLV 125
V W+A+I GY HG E L+ + Q FPN+ + +L +C+ H LV
Sbjct: 423 VMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACN--HSGLV 473
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+RH +H+ + G + + + L++ + G I ++++FD+ Y D+ WN+I+++
Sbjct: 69 KRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRS 128
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG-NKVFHSMLENHGVV 347
Y+ + ++ ++++ M V PD TF +L AC+ L+ G + + H + +G
Sbjct: 129 YSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE--LLDFGLSCIIHGQIIKYGFG 186
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ +V L + G I A K++ + V W+ ++ ++G+
Sbjct: 187 SDVFVQNGLVALYAKCGHIGVA-KVVFDGLYHRTIVSWTSIISGYAQNGK 235
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/591 (34%), Positives = 339/591 (57%), Gaps = 29/591 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L AC +I+ ++ +M+N+ EP DL+V N ++ ++ K G + DAR LFDE
Sbjct: 120 YDALVSACVGLRSIRGVKRVFNYMVNS-GFEP-DLYVMNRVLFVHVKCGLMLDARKLFDE 177
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCD-----YLHG 122
MP++++ SW +I G+ GN E F LF + + F + +I G
Sbjct: 178 MPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVG 237
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H+ ALK + +V+ ALI+MYSK + ++A VF+ M + + WNS+IA++
Sbjct: 238 RQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASY--- 294
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A EEAL + +++ G D T SIV++ CA L + +A H+
Sbjct: 295 ----------ALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAA 344
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + G++ D V AL+ Y++ G + + VF++M +++SWN+++ Y HGQ +EA
Sbjct: 345 LVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEA 404
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+++F M + P+ TF+++LSACS++GL + G ++F+SM +H V P+ HYACMV+
Sbjct: 405 VEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVE 464
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G + EA +LIR P +P + +W+ LL +CR H L +LAA L +EP
Sbjct: 465 LLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCN 524
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ + N+Y SG +A + + +K +R P +WIE++ + + F G K H Q + I
Sbjct: 525 YIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEI 584
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
++K+ ++ ++ GYV E L D++EE ++ L +HSEKLA+ F ++N +
Sbjct: 585 YEKVNNMMVEISRHGYVEENKALLPDVDEE-EQRILKYHSEKLAIAFGLINTPHW----T 639
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++I + R+C DCH+ +K + + G+EIVVRD++RFHHF+D CSC DYW
Sbjct: 640 PLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 5/203 (2%)
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
E LF +L+ +G T+ ++ AC GL + R V + + GFE D + N
Sbjct: 98 EAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNR 157
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD--- 313
++ + +CG + ++++FD+M D+ SW +++ + G EA LF M + +
Sbjct: 158 VLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGR 217
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
S TF +++ A + GLVQ G ++ HS GV ++D+ + G I +A +
Sbjct: 218 SRTFTTMIRASAGLGLVQVGRQI-HSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVF 276
Query: 374 REMPMEPDSVIWSVLLGSCRKHG 396
+MP E +V W+ ++ S HG
Sbjct: 277 DQMP-EKTTVGWNSIIASYALHG 298
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/530 (37%), Positives = 307/530 (57%), Gaps = 23/530 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y AC + + Q+H MI +F+ L+ MY + G LDDAR++ D
Sbjct: 13 YEAAITACIERRALWEGRQVHARMIT--ARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCD----YLHG 122
MP+R+VVSWT +ISGY+Q E LF +L+ PNE++LA+VL SC G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K VH+L +K + ++H++V ++L++MY+KS EA +VF+ + R+V+S ++I+ +
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGY--- 187
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
A+ +EEAL LFRQL EGM + TF+ ++ A +GL + + VH+L
Sbjct: 188 ----------AQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 237
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I + + N+LI Y++CG + S++VFD M +VSWN++L Y HG E
Sbjct: 238 ILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEV 297
Query: 302 LQLFSNMN--VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+ LF +++ V+PDS T +++LS CSH GLV EG +F ++++ + HY C++DL
Sbjct: 298 ISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 357
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR GR+ +A LI MP E IW LLG+CR H + EL A KL ++EP ++ +
Sbjct: 358 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNY 417
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V +SNIY +G + +RK M V K PG SWI ++ +H F S + HP ++ I
Sbjct: 418 VILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDIN 477
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
K++E+ +K G+VP+ S LHD+++E KE L HSEKLA+ F +MN
Sbjct: 478 AKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMN 527
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 315/588 (53%), Gaps = 63/588 (10%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFP-NEFSLASVLISCD 118
AR +FDE+P + W +I Y N +E LF + Q P + +SL+ V+ +C
Sbjct: 57 ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMYSK--------SCADE----------- 155
L +G+ +H LK L + ++V ALI MY+K + DE
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176
Query: 156 -------------AWKVFENMEFRNVISWNSMIAAF--------------RACKLE---- 184
A +F+ M R+++SWN+MI R C+ +
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ I +AK + EAL LF ++Q + PD T VL AC + +H I +
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIER 296
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
E D + +L+ YA+CG I S +VF+ M D+ +W++++ A HG + AL
Sbjct: 297 NRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDH 356
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
FS M +++P+ TF+ +LSACSH GLV EG F SM + + V P+++HY C+VD+LG
Sbjct: 357 FSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILG 416
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R GR+ EA +LI+ MP PD+++W LLG+CR + +AE A L +LEP +V
Sbjct: 417 RAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVL 476
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY + ++K +R+ MK ++K PG S IE++N VHEF +G + HP+ + I +
Sbjct: 477 LSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRM 536
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L E+ +LK GY P T+ L D +E+ KE L HHSEKLA+ F +++ S IR
Sbjct: 537 LSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAP----GSTIR 592
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I+KN+R+C DCH +KL S + I+VRD NRFHHF + CSC DYW
Sbjct: 593 IVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 27/287 (9%)
Query: 125 VHALALKFSLDAHVYV-ANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFRA 180
+HAL +K SLD + +V A L +++ S A++ A VF+ + + WN+MI A+
Sbjct: 22 IHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY-- 79
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP-DWCTFSIVLKACAGLVTERHASAVH 239
L +Q N +E++ LF Q++ + P D + S+V++AC L + +H
Sbjct: 80 --LNSQ---------NPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLH 128
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K G D + ALI YA+ G I +++ + D+M + DLV +N +L Y G+
Sbjct: 129 TQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEIN 188
Query: 300 EALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
A LF M + D ++ +++ + G V K+F E L ++ M+
Sbjct: 189 LAHDLFDRMP-ERDLVSWNTMIHGHASLGDVGTAKKLFDRTCER-----DLISWSSMIAA 242
Query: 360 LGRVGRILEAEKLIREMPME---PDSVIWSVLLGSCRKHGETRLAEL 403
+ + EA +L EM + PD V +L +C G + ++
Sbjct: 243 YAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKM 289
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 61/315 (19%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G I A L + M +DL N +I+ +A G + A+ LFD +R+++SW++
Sbjct: 185 GEINLAHDLFDRM------PERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSS 238
Query: 79 LISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFS 133
+I+ YA+ + E RLF + L P++ ++ SVL +C + GK++H +
Sbjct: 239 MIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNR 298
Query: 134 LDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
++ + + +L++MY+K C D + +VF M R+V +W++MI A++ F
Sbjct: 299 IEIDLKLGTSLVDMYAK-CGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHF 357
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFED 249
+KM +E+ + P+ TF VL AC+ GLV E
Sbjct: 358 SKMISED-------------IKPNDVTFIGVLSACSHIGLVDE----------------- 387
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN 309
+ S+S V K+ + + ++ G+ +EA++L +M
Sbjct: 388 ----------GWTYFTSMSKVYDVSPKIEH-----YGCVVDILGRAGRLQEAMELIKSMP 432
Query: 310 VQPDSATFVSLLSAC 324
PD+ + +LL AC
Sbjct: 433 FAPDAIVWRALLGAC 447
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ AC G + +HE + N DL + L++MYAK G +D++ +F+ M
Sbjct: 273 SVLSACGDVGALGMGKMIHECIERN--RIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMN 330
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHAL 128
R+V +W+A+I G A HG E F ++ + PN+ + VL +C H LV
Sbjct: 331 NRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACS--HIGLVDEG 388
Query: 129 ALKFSLDAHVYVANALINMYS--------KSCADEAWKVFENMEF-RNVISWNSMIAAFR 179
F+ + VY + I Y EA ++ ++M F + I W +++ A R
Sbjct: 389 WTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACR 448
Query: 180 ACK 182
K
Sbjct: 449 IYK 451
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 323/571 (56%), Gaps = 36/571 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+LFV I++++ G ++ AR +FD VV+W ++SGY + EE RLF +
Sbjct: 169 SNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEM 228
Query: 100 ---LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSL-DAHVYVANALINMYSKS 151
+ PN +L +L +C D + GK ++ +K + + ++ + NALI+M++ S
Sbjct: 229 EKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFA-S 287
Query: 152 CA--DEAWKVFENMEFRNVISWNSMIAAF-RACKLE-----------------AQAIELF 191
C D A VF+ M+ R+VISW S++ F C+++ I+ +
Sbjct: 288 CGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGY 347
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+M +E L LFR +Q + PD T +L ACA L + I K ++DT
Sbjct: 348 LRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDT 407
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
I NALI Y +CG++ +K++F++M D +W +++ A +G +EAL +FS M
Sbjct: 408 FIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEA 467
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+V PD T++ ++ AC+H GLV +G F +M HG+ P L HY CMVDLLGR G + E
Sbjct: 468 SVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKE 527
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A ++I MP++P+S++W LLG+CR H +LAE+AA ++ +LEP + +V + NIY
Sbjct: 528 ALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAA 587
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
+ +RK M ++K PG S +E+ V+EF +G K HPQ + I+ KLE +
Sbjct: 588 CKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQD 647
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
L GY P+TS D+ EE KE LY HSEKLA+ +A+++ G + IRI+KN+R+
Sbjct: 648 LSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSG----KGVTIRIVKNLRM 703
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
CVDCH+ + S + +E++VRD RFHHF+
Sbjct: 704 CVDCHHMAMVVSKVYNRELIVRDKTRFHHFR 734
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 181/386 (46%), Gaps = 59/386 (15%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVL----- 114
AR +FDE+P+ +V W +I GY++ +E L+ L+ P+ F+ +L
Sbjct: 88 ARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK 147
Query: 115 -ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWN 172
++ Y L HA+ F LD++++V I+++S + A K+F+ + V++WN
Sbjct: 148 DMALKYGKVLLNHAVIHGF-LDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWN 206
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+++ + K ++ LF +M+ + E + +P+ T ++L AC+ L
Sbjct: 207 VVLSGYNRFKRYEESKRLFIEMEKKCECV-----------SPNSVTLVLMLSACSKLKDL 255
Query: 233 RHASAVHSLIAKYGF-EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+++ K G E + ++ NALI +A CG + ++ VFD+M D++SW SI+
Sbjct: 256 VGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTG 315
Query: 292 YA--------------------------LHG-----QAKEALQLFSNM---NVQPDSATF 317
+A + G + KE L LF +M NV+PD T
Sbjct: 316 FANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTM 375
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
VS+L+AC+H G ++ G + ++ + + ++D+ + G + +A+K+ EM
Sbjct: 376 VSILTACAHLGALELGEWA-KTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEM- 433
Query: 378 MEPDSVIWSVLLGSC--RKHGETRLA 401
+ D W+ ++ HGE L
Sbjct: 434 QKKDKFTWTAMIVGLANNGHGEEALT 459
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 161/354 (45%), Gaps = 35/354 (9%)
Query: 109 SLASVLISCDYLHG-KLVHALALKFSLDA-HVYVANALINMYSKSCAD--EAWKVFENME 164
S S+L +C+ ++ +H+ +K L + H+++ +I +K D A KVF+ +
Sbjct: 37 SPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIP 96
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
+V WN+MI + +++ E + L++ + + PD TF +LK
Sbjct: 97 QPSVFIWNTMIKGY-------------SRINCSESGVSLYKLMLVHNIKPDGFTFPFLLK 143
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQVFDKMTYHDLV 283
+ ++ + + +GF D + + IH ++ CG ++ ++++FD ++V
Sbjct: 144 GFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVV 203
Query: 284 SWNSILKAYALHGQAKEALQLFSNMN-----VQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+WN +L Y + +E+ +LF M V P+S T V +LSACS + G +++
Sbjct: 204 TWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYN 263
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW-SVLLG---SCRK 394
++ V P L ++D+ G + A + EM D + W S++ G +CR
Sbjct: 264 KYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR-DVISWTSIVTGFANTCR- 321
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
+LA Q+ D + + M + Y F + + ++M+ S V+
Sbjct: 322 ------IDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVK 369
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/587 (35%), Positives = 332/587 (56%), Gaps = 29/587 (4%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA GN+ LH + +E ++ +N L++MY+K G L+ A +F +M
Sbjct: 301 SVLVACANIGNLSLGRALHGFGVKACFSE--EVVFSNTLLDMYSKCGNLNGATEVFVKMG 358
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKL 124
+VSWT++I+ Y + G + LF + + P+ +++ S++ +C G+
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD 418
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
VH+ +K + +++ V NALINMY+K +EA VF + ++++SWN+MI + L
Sbjct: 419 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLL 478
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
+A+ELF M+ + PD T + VL ACAGL +H I
Sbjct: 479 PNEALELFLDMQKQ--------------FKPDDITMACVLPACAGLAALDKGREIHGHIL 524
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G+ D +A AL+ YA+CG + L++ +FD + DL+SW ++ Y +HG EA+
Sbjct: 525 RRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAIS 584
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M ++PD ++F ++L+ACSH+GL+ EG K F+SM GV P+L+HYAC+VDLL
Sbjct: 585 TFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLL 644
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R+G + +A K I MP++PD+ IW VLL CR H + +LAE A + +LEP ++ +V
Sbjct: 645 ARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYV 704
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
++N+Y + + + + +RK M+ ++ PG SWIE+ + + F +G +HPQ + I
Sbjct: 705 VLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDV 764
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
L +L Q++ Y L + ++ KE HSEK A+ F I+N L R+V
Sbjct: 765 LLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILN---LPPGRTV- 820
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCND 587
R+ KN R+C DCH K S EIV+RDSNRFHHFKD +CSC D
Sbjct: 821 RVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 195/418 (46%), Gaps = 27/418 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ CA +++ ++H +I+N + + L L+ MY G L R +FD+
Sbjct: 97 YCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEAL--GAKLVFMYVNCGDLVQGRKIFDK 154
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL--- 124
+ V W L+S YA+ GN E LF + + + ++ C GK+
Sbjct: 155 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 214
Query: 125 --VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH LK ++ V N+LI Y K + A +F+ + +V+SWNSMI
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+E+F +M L L G+ D T VL ACA + A+H
Sbjct: 275 GFSGNGLEIFIQM------LIL-------GVEVDLTTLVSVLVACANIGNLSLGRALHGF 321
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K F ++ V +N L+ Y++CG+++ + +VF KM +VSW SI+ AY G +A
Sbjct: 322 GVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDA 381
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ LF M V+PD T S++ AC+ + + +G V HS + +G+ L +++
Sbjct: 382 IGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV-HSYVIKNGMGSNLPVTNALIN 440
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGD 415
+ + G + EA + ++P++ D V W+ ++G ++ A EL KQ +P D
Sbjct: 441 MYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDD 497
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
AIEL K K+ E L +C+ VL+ CA + VHS+I
Sbjct: 79 NAIELLTKSKSYELGL------------NSYCS---VLQLCAEKKSLEDGKRVHSVIISN 123
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G D + L+ Y CG + +++FDK+ + WN ++ YA G +E++ LF
Sbjct: 124 GISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 183
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL---DHYACMVDL 359
M V + TF +L + G V+E +V HG V +L + A + L
Sbjct: 184 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV-------HGYVLKLGFGSNTAVVNSL 236
Query: 360 LG---RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + G + A L E+ EPD V W+ ++ C +G
Sbjct: 237 IAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 275
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 322/563 (57%), Gaps = 46/563 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE---ECFRLFC 97
DLF+ + +I+MYAK G L +A LF +P NV+ A+I+G+ + A+ E L+
Sbjct: 246 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYS 305
Query: 98 SLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS- 151
L P+EFS +S+L +C ++ GK +H LK S VY+ +ALI++YS S
Sbjct: 306 ELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSG 365
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
C ++ ++ F ++ ++V+ W S+I+ C ELF EEAL LF++ R G
Sbjct: 366 CMEDGYRCFRSLPKQDVVIWTSVISG---CVQN----ELF------EEALRLFQESVRCG 412
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ PD S V+ ACA L R + L K GF T + N+ IH AR G + +
Sbjct: 413 LRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAAT 472
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHA 327
+ F +M D+VSW++++ ++A HG A++AL +F+ M P+ TF+S+L+ACSH
Sbjct: 473 RRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHG 532
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV EG + + M + +G+ P + H C+VDLLGR GR+ +AE IR+ D+V+W
Sbjct: 533 GLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRS 592
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL SCR HG+ +L A K+ LEP S +V + N+Y +G + A R MK V
Sbjct: 593 LLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGV 652
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PGLSWIE+ + VH F +G K HP+ +AI++K+ E++ ++ G+
Sbjct: 653 KKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKVAGI--------------- 697
Query: 508 EHKEEQLYH-HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
+E+ L HSEKLA+ F +++ + + IR+MKN+R+C DCH+ M+L S +E
Sbjct: 698 SSREQDLAGCHSEKLAVAFGMIHL----PQSAPIRVMKNLRVCRDCHSTMELISKSERRE 753
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I++RD+ RFH F+D CSC YW
Sbjct: 754 IILRDAIRFHRFRDGSCSCGGYW 776
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 186/379 (49%), Gaps = 38/379 (10%)
Query: 45 TNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF 104
+N + +MYA+ G + +AR +FD +R+ VSW AL+SGY + G EE +F + ++
Sbjct: 140 SNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGL 199
Query: 105 P-NEFSLASVLISC----------DYLHGKL---VHALALKFSLDAHVYVANALINMYSK 150
N F+L S++ C D G++ VH +K LDA +++A+A+I+MY+K
Sbjct: 200 GWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAK 259
Query: 151 SCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
A A +F+++ NVI N+MIA F C+ EA + EAL L+ +LQ
Sbjct: 260 RGALTNAVALFKSVPDPNVIVLNAMIAGF--CREEAADV--------AREALGLYSELQS 309
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
GM P +FS +L+AC +H + K+ F+ D I +ALI Y+ G +
Sbjct: 310 RGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMED 369
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSH 326
+ F + D+V W S++ + +EAL+LF ++PD S+++AC+
Sbjct: 370 GYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACAS 429
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACM----VDLLGRVGRILEAEKLIREMPMEPDS 382
+ + G ++ + V + + M + + R G + A + +EM D
Sbjct: 430 LAVARTGEQI-----QCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESR-DV 483
Query: 383 VIWSVLLGSCRKHGETRLA 401
V WS ++ S HG R A
Sbjct: 484 VSWSAVISSHAHHGCARDA 502
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 197/412 (47%), Gaps = 51/412 (12%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGY---LDDARHL 64
Y L +CA + +H H+ PN LF+ N L+ Y + G L AR L
Sbjct: 5 YLHLLRSCA---ALPHVAAVHAHLARAHPN--ASLFLRNCLLASYCRLGVGAPLHAAR-L 58
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISC----DY 119
DEMP+RN VS+ +I Y++ G F + + F+ A+ L +C D
Sbjct: 59 LDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDV 118
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
GK VHA+ + L ++++N++ +MY++ C + EA +VF+ E R+ +SWN++++
Sbjct: 119 RTGKAVHAMVVLGGLGNGLFLSNSVASMYAR-CGEMGEARRVFDAAEERDDVSWNALLSG 177
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI--VLKAC--------- 226
+ + EE L +F + R G+ W +F++ ++K C
Sbjct: 178 -------------YVRAGAREETLEVFSLMCRHGLG--WNSFALGSIIKCCASSSSYAAA 222
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
+ R A AVH + K G + D +A+A+I YA+ G+++ + +F + +++ N
Sbjct: 223 GDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLN 282
Query: 287 SILKAYALHGQ---AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+++ + A+EAL L+S + +QP +F S+L AC+ AG G ++ H
Sbjct: 283 AMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQI-HGQ 341
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ H + + ++DL G + + + R +P + D VIW+ ++ C
Sbjct: 342 VLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQ-DVVIWTSVISGC 392
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 140/298 (46%), Gaps = 30/298 (10%)
Query: 113 VLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSK---SCADEAWKVFENMEFRNV 168
+L SC L H VHA + +A +++ N L+ Y + A ++ + M RN
Sbjct: 8 LLRSCAALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNA 67
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+S+N +I A+ L A ++ FA+ + + F T++ L AC+
Sbjct: 68 VSYNLVIVAYSRAGLPALSLATFARARAWARVVDRF-------------TYAAALAACSR 114
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ R AVH+++ G + ++N++ YARCG + +++VFD D VSWN++
Sbjct: 115 ALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNAL 174
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC------SHAGLVQEGN--KVF 337
L Y G +E L++FS M + +S S++ C + AG V G +
Sbjct: 175 LSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAV 234
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-GSCRK 394
H + G+ L + M+D+ + G + A L + +P +P+ ++ + ++ G CR+
Sbjct: 235 HGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP-DPNVIVLNAMIAGFCRE 291
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/596 (35%), Positives = 333/596 (55%), Gaps = 30/596 (5%)
Query: 20 NIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
++ + +Q+H ++ +N P+ + L YA G + + LF + ++ +TA
Sbjct: 41 SVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 100
Query: 79 LISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH 137
I+ + +G ++ F L+ LL PNEF+ +S+L SC GKL+H LKF L
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGID 160
Query: 138 VYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQ--------- 186
YVA L+++Y+K A KVF+ M R+++S +MI + + +EA
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCE 220
Query: 187 --------AIELFAKMKNEEEALFLFRQLQREGMA-PDWCTFSIVLKACAGLVTERHASA 237
I+ +A+ +AL LF++L EG PD T L AC+ +
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + + + LI Y++CGS+ + VF+ D+V+WN+++ YA+HG
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+++AL+LF+ M +QP TF+ L AC+HAGLV EG ++F SM + +G+ P+++HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C+V LLGR G++ A + I+ M M+ DSV+WS +LGSC+ HG+ L + A L L
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+S +V +SNIY G + +R MK + K PG+S IEIEN+VHEF +G + H
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ + I+ L ++ ++K GYVP T+ L D+EE KE+ L HSE+LA+ + +++
Sbjct: 521 KSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLIS---- 576
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ S ++I KN+R+C DCH KL S + G++IV+RD NRFHHF D CSC D+W
Sbjct: 577 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/600 (34%), Positives = 338/600 (56%), Gaps = 44/600 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
I A +C G +++ Q H ++ +F N +V N L++MY+K + DA
Sbjct: 135 ILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHN-----YVRNALVSMYSKCSIVQDAMG 189
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLIS 116
+++E+P ++V++ +++S ++G E + S++ + F N FSL + L
Sbjct: 190 VWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLK- 248
Query: 117 CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE--AWKVFENMEFRNVISWNSM 174
D G VH L ++ YV++A+INMY K C A VF+ ++ RNV+ W ++
Sbjct: 249 -DLRLGLHVHGKMLTSDVECDAYVSSAIINMYGK-CGKSLMARGVFDGLQSRNVVLWTAV 306
Query: 175 IAAF--RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+A+ C EEAL LF ++++E + + T++++L ACAGL
Sbjct: 307 MASCFQNGC---------------FEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSAR 351
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
R+ S +H K GF+ ++ NALI+ YA+ G I +K+VF M + D+++WN+++ +
Sbjct: 352 RNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGF 411
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ HG K+AL +F +M P+ TF +LSAC H GLVQEG H +++ GV P
Sbjct: 412 SHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPG 471
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
L+HY C+V LL + G++ EA +R P++ D V W LL +C H L A +
Sbjct: 472 LEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVL 531
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
+++P D + +SNIY ++ +RK M+ +++K PG+SWIEI N H F S
Sbjct: 532 EMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSED 591
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
+HP ++K++EL+ +K +GY P+ LHD+E+E KE L +HSEKLA+ + ++
Sbjct: 592 NKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLL- 650
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
L E S++ ++KN+RIC DCH+ ++L S + + IVVRD+NRFHHF+D CSC DYW
Sbjct: 651 --KLPSEASIL-VIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 194/399 (48%), Gaps = 33/399 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+K +H H+I + N LIN YAK + A +LFD MP+RNVVSW+AL
Sbjct: 44 NLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSAL 103
Query: 80 ISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISC----DYLHGKLVHALALKFS 133
++GY +G + + RL ++ PNE+ LA + SC G+ H L LK
Sbjct: 104 MTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTG 163
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
H YV NAL++MYSK S +A V+ + +++++NS++++ +E +
Sbjct: 164 FSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSL----VENGYL---- 215
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
E L + R + E + D TF CA L R VH + E D
Sbjct: 216 -----REGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAY 270
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+++A+I+ Y +CG +++ VFD + ++V W +++ + +G +EAL LFS M N
Sbjct: 271 VSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQEN 330
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA----CMVDLLGRVGR 365
V+ + T+ LL+AC AGL N S+L H H+ ++++ + G
Sbjct: 331 VKSNEFTYAVLLNAC--AGLSARRNG---SLLHGHSEKSGFKHHVMVGNALINMYAKSGD 385
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
I A+K+ +M M D + W+ ++ HG + A L
Sbjct: 386 IEAAKKVFSDM-MHRDIITWNAMICGFSHHGLGKKALLV 423
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/467 (41%), Positives = 284/467 (60%), Gaps = 23/467 (4%)
Query: 130 LKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
K D +++V NALIN Y S+ D A K+F+ M R+++SW+++I+ L A+A+
Sbjct: 104 FKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEAL 163
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI---VLKACAGLVTERHASAVHSLIAKY 245
+F +M+ R ++ +W +I V+ A + L VHS I +
Sbjct: 164 SVFQQMQMGH------RDIR------NWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRM 211
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G + ALI+ Y+RCG I S +VFD+M ++V+W +++ A+HG+++EAL++F
Sbjct: 212 GIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVF 271
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M ++PD A F+ +L ACSH GLV++G +VF SM + G+ P L+HY CMVDLLGR
Sbjct: 272 YEMKESGLKPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGR 331
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G ILEA + EMP++P+SVIW LLG+C H LAE A ++ +L+P +V +
Sbjct: 332 AGLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLL 391
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
SN Y G++ +R MK +R+ K PGLS++ I+ VHEF SG HPQ E I K L
Sbjct: 392 SNAYGRVGNWGGKAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFL 451
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
+I +K GY P TS LHDI++E KE L +HSEKLA+ F ++ R+R IR+
Sbjct: 452 ASIIDTVKLGGYTPNTSSVLHDIQDEEKEHCLGYHSEKLAVAFVLLYH----RDRRTIRV 507
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+KN+RIC DCH+FMK AS + ++I++RD NRFHHF +CSC D+W
Sbjct: 508 IKNLRICYDCHDFMKHASGIFDRDIIIRDRNRFHHFSKGLCSCQDFW 554
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 11/185 (5%)
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K GF+ + + NALI+AY GS+ ++ ++FD+M D+VSW++++ + EA
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162
Query: 302 LQLFSNMNVQP-------DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
L +F M + D A +S++SA S G+++ G V HS + G+V +
Sbjct: 163 LSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWV-HSFIVRMGIVMTVPLGT 221
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LE 412
++++ R G I + K+ EMP E + V W+ L+ HG +R A ++K+ L+
Sbjct: 222 ALINMYSRCGLIDRSVKVFDEMP-ERNVVTWTALINGLAVHGRSREALKVFYEMKESGLK 280
Query: 413 PGDSL 417
P +L
Sbjct: 281 PDGAL 285
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 12/140 (8%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PN 106
LINMY++ G +D + +FDEMP+RNVV+WTALI+G A HG + E ++F + + P+
Sbjct: 223 LINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPD 282
Query: 107 EFSLASVLISCDYLHGKLV-------HALALKFSLDAHVYVANALINMYSKS-CADEAWK 158
VL++C HG LV ++ +F + + ++++ ++ EA+
Sbjct: 283 GALFIGVLVACS--HGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFD 340
Query: 159 VFENMEFR-NVISWNSMIAA 177
E M + N + W +++ A
Sbjct: 341 FVEEMPLKPNSVIWRTLLGA 360
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/597 (36%), Positives = 329/597 (55%), Gaps = 35/597 (5%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L S ++ + +CA+ G + H ++ D+ + L++ YAK G L A
Sbjct: 7 LPSKTSFSLILRSCAISGEAQLGEAFHCQIMK--MGFEYDMILQTGLLDFYAKVGDLKCA 64
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH 121
+ +F MP+R+VV+ A+IS ++HG EE LF ++ + N S S +I+C Y
Sbjct: 65 KRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER---NSCSWNS-MITC-YCK 119
Query: 122 GKLVHALALKFSLDA--HVYVANALINMYSKS----CADEAWKVFENMEFRNVISWNSMI 175
+++ L F + V NA+I+ Y KS A E + + + RN ++WN+MI
Sbjct: 120 LGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSA--RNSVTWNTMI 177
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+A+ C AI +F +Q+Q E + P T +L ACA L
Sbjct: 178 SAYVQCGEFGTAISMF-------------QQMQSENVKPTEVTMVSLLSACAHLGALDMG 224
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H I + D V+ NALI Y +CG++ + VF ++ ++ WNSI+ ++
Sbjct: 225 EWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMN 284
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G+ +EA+ F M ++PD TFV +LS CSH+GL+ G + F ML +G+ P ++H
Sbjct: 285 GRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEH 344
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
Y CMVDLLGR G + EA +LIR MPM+P+S++ LL +C+ H +T+L E +L +L+
Sbjct: 345 YGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELD 404
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRH 472
P D +V +SN+Y ++ RK M V K PG S IE+ N VHEF +G H
Sbjct: 405 PCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSH 464
Query: 473 PQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
PQ I L+E+ +LKG G+VP T+ LHDIEEE KE + +HSE++A+ F +M+
Sbjct: 465 PQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMST-- 522
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN+R C DCH+ MKL S+ +EI+VRD RFHHF++ CSCNDYW
Sbjct: 523 --PPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R + P +FS++L++CA + A H I K GFE D ++ L+ YA+ G +
Sbjct: 3 RNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLK 62
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAG 328
+K+VF M D+V+ N+++ A + HG +EA LF NM + +S ++ S+++ G
Sbjct: 63 CAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM-TERNSCSWNSMITCYCKLG 121
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+ +F + V + + ++D + +++ A++L M +SV W+ +
Sbjct: 122 DINSARLMF-----DCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTM 176
Query: 389 LGSCRKHGE 397
+ + + GE
Sbjct: 177 ISAYVQCGE 185
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/624 (36%), Positives = 325/624 (52%), Gaps = 49/624 (7%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMY--AKFGYLDDA 61
+ I T H C N+KQ ++ MI D F + L+ + F LD +
Sbjct: 28 TLSILETHLHNCH---NLKQFNRILSQMI--LTGFISDTFAASRLLKFSTDSPFIGLDYS 82
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDY- 119
+FD + N W ++ Y Q +AE+ L+ +++ P+ ++ V+ +C
Sbjct: 83 LQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVR 142
Query: 120 ---LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSM 174
GK +H LK D+ VYV N LINMY+ C + +A K+F+ + +SWNS+
Sbjct: 143 LLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYA-VCGNMRDARKLFDESPVLDSVSWNSI 201
Query: 175 IAAFRACKLEAQAIE---LFAKMKNE------------------EEALFLFRQLQREGMA 213
+A + Q +E LF +M + EEAL +F ++ GM
Sbjct: 202 LAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 261
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA----RCGSISL 269
D VL ACA L + +H L+ + G E + NALIH Y+ +CG +
Sbjct: 262 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVEN 321
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ +VF+ M + SWN+++ A++G + +L +FS M V P+ TF+ +L AC H
Sbjct: 322 ALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRH 381
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
GLV EG F SM+E HG+ P + HY CMVDLLGR G + EAEKLI MPM PD W
Sbjct: 382 MGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWG 441
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGF-VQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG+C+KHG+T + E KL +L+P D GF V +SNI+ G + +R MK
Sbjct: 442 ALLGACKKHGDTEMGERVGRKLIELQP-DHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQ 500
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V K PG S IE VHEF +G K HP + L E+ +LK GY P+T+ DI
Sbjct: 501 GVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDI 560
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+EE KE L+ HSEKLA+ F ++ + IRIMKN+RIC DCH KL S +
Sbjct: 561 DEEEKETTLFRHSEKLAIAFGLLT----ISPPTPIRIMKNLRICNDCHTAAKLISKAYAR 616
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EIVVRD +RFH+FK+ CSC DYW
Sbjct: 617 EIVVRDRHRFHYFKEGACSCMDYW 640
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/593 (36%), Positives = 335/593 (56%), Gaps = 41/593 (6%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP-K 70
F +CA QLH H+I EP+ FV LI+MY K + AR +FDE
Sbjct: 63 FKSCASLSLPLAGSQLHGHVIKT-GCEPEP-FVQTSLISMYCKCSTIASARKVFDENHHS 120
Query: 71 RNV-VSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC-DYLH---GKL 124
RN+ V + ALI+GY+ + + LF + + N ++ ++ C +H G
Sbjct: 121 RNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTS 180
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+HA +++F LD + V N L+ MY + D A K+F+ M + +I+WN+MI+ + L
Sbjct: 181 LHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGL 240
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
++L+ R+++ G+ PD T VL +CA L V I
Sbjct: 241 AGHVLDLY-------------RKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIE 287
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
GF + + NALI+ YARCG++ ++ +FD MT +++SW +I+ Y +HGQ + A+Q
Sbjct: 288 LSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQ 347
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M + PD A FVS+LSACSHAGL ++G F +M ++G+ P +HY+C+VDLL
Sbjct: 348 LFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLL 407
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR GR+ EA KLI M +EPD +W LLG+C+ H LAELA K+ + EP + +V
Sbjct: 408 GRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYV 467
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SNI+ +G+ +R M+ +++K PG S++E + R+H F +G + HPQ + I+
Sbjct: 468 LLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYH 527
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH----HSEKLALVFAIMNQGSLCRE 536
L+ L +K G +D ++E + E+L HSEKLA+ F ++N
Sbjct: 528 MLDGLEDIIKRRG-------GSNDNDQESRNEELITGMGVHSEKLAIAFGLINT----EP 576
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I ++KN+R+C DCH F+KL S+++ +++VVRD+ RFHHFK+ +CSC DYW
Sbjct: 577 GTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 178/366 (48%), Gaps = 29/366 (7%)
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLH----GKL 124
+ SW A + A+ + +E L+C +L PN F+ SC L G
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF-ENMEFRNV-ISWNSMIAAFRAC 181
+H +K + +V +LI+MY K S A KVF EN RN+ + +N++IA +
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGY--- 134
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
L ++ +A+ LFRQ+++EG++ + T ++ CAG + +++H+
Sbjct: 135 -------SLNSRFS---DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHAC 184
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
++G + D + N L+ Y RCGS+ ++++FD M L++WN+++ YA +G A
Sbjct: 185 SVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHV 244
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM-LENHGVVPQLDHYACMV 357
L L+ M + PD T V +LS+C+H G G +V + L G P L + ++
Sbjct: 245 LDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALI 302
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDS 416
++ R G +++A + M E + + W+ ++ HG+ LA +L + E D
Sbjct: 303 NMYARCGNLVKARAIFDGM-TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDG 361
Query: 417 LGFVQM 422
FV +
Sbjct: 362 AAFVSV 367
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/587 (35%), Positives = 322/587 (54%), Gaps = 51/587 (8%)
Query: 16 ALHGNI---KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRN 72
A+ GN+ K +H +++ N +E ++ +T LI+MY K G L A+ LFD + KR+
Sbjct: 197 AVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRS 256
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----GKLVHA 127
VVSWT +I+G + +E + F +L+ FPNE +L S++ C ++ GK HA
Sbjct: 257 VVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHA 316
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAFRACKLEA 185
L+ + + ALI+MY K C + +F ++ ++V W+ +I+A+
Sbjct: 317 YLLRNGFGMSLALVTALIDMYGK-CGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMD 375
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
Q LF +M N + + P+ T +L CA H+ I ++
Sbjct: 376 QVFNLFVEMLNND-------------VKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRH 422
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G E D ++ ALI+ YA+CG +++++ +F++ D+ WN+++ +++HG KEAL+LF
Sbjct: 423 GLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELF 482
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
S M V+P+ TFVS+ ACSH+GL ++HY C+VDLLGR
Sbjct: 483 SEMESHGVEPNDITFVSIFHACSHSGL--------------------MEHYGCLVDLLGR 522
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G + EA +I MPM P+++IW LL +C+ H L E+AA K+ +L+P + V
Sbjct: 523 AGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLK 582
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
SNIY + +N +R+ M S ++K PGLSWIE+ VH F SG K Q +++ +
Sbjct: 583 SNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMV 642
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
E+ +L+ GY P T+ L +I+EE KE L +HSEKLA F +++ + IRI
Sbjct: 643 TEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTA----PGTPIRI 698
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+KN+RIC DCH KL S + G+ I+VRD NRFHHF + CSC YW
Sbjct: 699 VKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 203/431 (47%), Gaps = 35/431 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I +L ACA + +LH N D+FV N L+NMY K G L AR +FD
Sbjct: 90 ILPSLLKACAQASSGDLGRELHGFAQKN--GFASDVFVCNALMNMYEKCGCLVSARLVFD 147
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASV-LISC-----DYL 120
+MP+R+VVSWT ++ Y + E RL +Q+ +A + LI+ D
Sbjct: 148 QMPERDVVSWTTMLGCYVRSKAFGEALRLV-REMQFVGVKLSGVALISLIAVFGNLLDMK 206
Query: 121 HGKLVHALALKFSLD--AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
G+ VH ++ D V + ALI+MY K C A ++F+ + R+V+SW MIA
Sbjct: 207 SGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAG 266
Query: 178 -FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
R+C+L+ A KN F ++ E + P+ T ++ C + T
Sbjct: 267 CIRSCRLDEGA-------KN-------FNRMLEEKLFPNEITLLSLITECGFVGTLDLGK 312
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
H+ + + GF + ALI Y +CG + ++ +F+ + D+ W+ ++ AYA
Sbjct: 313 WFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVS 372
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+ LF M +V+P++ T VSLLS C+ AG + G K H+ + HG+ +
Sbjct: 373 CMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLG-KWTHAYINRHGLEVDVILE 431
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQL 411
++++ + G + A L E M+ D +W+ ++ H G+ L + + +
Sbjct: 432 TALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGV 490
Query: 412 EPGDSLGFVQM 422
EP D + FV +
Sbjct: 491 EPND-ITFVSI 500
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 172/394 (43%), Gaps = 51/394 (12%)
Query: 12 FHACALHG--NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
F C+ H N++Q QLH H I + P F +H P
Sbjct: 11 FSGCSGHSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFT-------------------P 51
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP--NEFSLASVLISCDYLH----GK 123
+ N + LIS Y + + F + + + F L S+L +C G+
Sbjct: 52 EAN---YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGR 108
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H A K + V+V NAL+NMY K C A VF+ M R+V+SW +M+ C
Sbjct: 109 ELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTML----GCY 164
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+ ++A EAL L R++Q G+ ++ L+ + AVH I
Sbjct: 165 VRSKAF---------GEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYI 215
Query: 243 AKYGFED--DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ ++ + + ALI Y + G ++ ++++FD+++ +VSW ++ + E
Sbjct: 216 VRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDE 275
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
+ F+ M + P+ T +SL++ C G + G K FH+ L +G L ++
Sbjct: 276 GAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLG-KWFHAYLLRNGFGMSLALVTALI 334
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
D+ G+ G++ A L + + D IWSVL+ +
Sbjct: 335 DMYGKCGQVGYARALFNGVK-KKDVKIWSVLISA 367
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 19/257 (7%)
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F F ++N +I+++ L + + M++ + A A D
Sbjct: 44 FSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAA------------ALDNFIL 91
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+LKACA + +H K GF D + NAL++ Y +CG + ++ VFD+M
Sbjct: 92 PSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPE 151
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D+VSW ++L Y EAL+L M V+ +SL++ + ++ G V
Sbjct: 152 RDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAV 211
Query: 337 FHSMLENHGVVP-QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
++ N G ++ ++D+ + G + A++L + + V W+V++ C +
Sbjct: 212 HGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLS-KRSVVSWTVMIAGCIR- 269
Query: 396 GETRLAELAATKLKQLE 412
RL E A + LE
Sbjct: 270 -SCRLDEGAKNFNRMLE 285
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/616 (36%), Positives = 349/616 (56%), Gaps = 71/616 (11%)
Query: 22 KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALIS 81
++ ++H H+I N+ + + + N L+NMYAK G + DA +F+ M +++ VSW +LIS
Sbjct: 321 RKGREVHAHVIRTGLNDNK-VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLIS 379
Query: 82 GYAQHGNAEECFRLFCSLLQYFFPNEFSLASVL--------------------------- 114
G Q+ +E+ +F + +Y ++ S SV+
Sbjct: 380 GLDQNECSEDAAEMFSLMPEY---DQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGL 436
Query: 115 -----------ISCDYLH--GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKV 159
+S LH +HAL LK+ L + NAL++ Y K C + E K+
Sbjct: 437 SRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGK-CGEMNECEKI 495
Query: 160 FENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
F M E R+ +SWNSMI+ + +L +A++L F+ ++ QR D T
Sbjct: 496 FARMSETRDEVSWNSMISGYIHNELLHKAMDL---------VWFMMQKGQR----LDSFT 542
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F+ +L ACA + T VH+ + E D V+ +AL+ Y++CG I + + F+ M
Sbjct: 543 FATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMP 602
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNK 335
++ SWNS++ YA HG ++AL+LF+ M + PD TFV +LSACSH G V+EG +
Sbjct: 603 LRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE 662
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC-RK 394
F SM E + + P+++H++CMVDLLGR G++ E I MPM+P+ +IW +LG+C R
Sbjct: 663 HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRA 722
Query: 395 HGE-TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
+G T L AA L +LEP +++ +V ++N+Y + R MK + V+K G
Sbjct: 723 NGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGC 782
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SW+ +++ VH F +G K HP+++ I+ KL EL +++ GY+P+T AL D+E E+KEE
Sbjct: 783 SWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEEL 842
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L +HSEK+A+ F + Q +L IRIMKN+R+C DCH+ S ++G++IV+RDSN
Sbjct: 843 LSYHSEKIAVAFVLTRQSAL-----PIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSN 897
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF+D CSC DYW
Sbjct: 898 RFHHFEDGKCSCGDYW 913
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 189/401 (47%), Gaps = 73/401 (18%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEE-CFRLFCSL 99
+LF++N LIN+Y + G L A+ LFDEM RN+V+W LISGY Q+G +E C R +
Sbjct: 133 NLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMV 192
Query: 100 LQYFFPNEFSLASVLISCDYLH------GKLVHALALKFSLDAHVYVANALINMYSKSC- 152
F PN ++ S L +C G +H L K + V V N LI+MY SC
Sbjct: 193 RAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG-SCL 251
Query: 153 --ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A++A VF+ + RN ISWNS+I+ ++++ + A LF +Q+E
Sbjct: 252 DSANDARSVFDGIGIRNSISWNSIIS-------------VYSRRGDAVSAYDLFSSMQKE 298
Query: 211 GMA----PD--WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYAR 263
G+ P+ + FS++ + R VH+ + + G D+ V I N L++ YA+
Sbjct: 299 GLGFSFKPNDAFSEFSVLEEG------RRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK 352
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM------------NVQ 311
G+I+ + VF+ M D VSWNS++ + +++A ++FS M
Sbjct: 353 SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGAL 412
Query: 312 PDS-----------------------ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
DS TF+++LSA S L + +++ H+++ + +
Sbjct: 413 SDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI-HALVLKYCLSD 471
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++ G+ G + E EK+ M D V W+ ++
Sbjct: 472 DTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 512
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+AT+ ACA +++ M++H I D+ V + L++MY+K G +D A F+
Sbjct: 543 FATILSACASVATLERGMEVHACGIR--ACLESDVVVGSALVDMYSKCGRIDYASRFFEL 600
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVLISCD---YLHGK 123
MP RNV SW ++ISGYA+HG+ E+ +LF +L P+ + VL +C ++
Sbjct: 601 MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEG 660
Query: 124 LVH--ALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMIAAFR 179
H +++ + L V + ++++ ++ DE +M + NV+ W +++ A
Sbjct: 661 FEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA-- 718
Query: 180 ACKLEAQAIEL 190
C+ + EL
Sbjct: 719 CCRANGRNTEL 729
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
TF ++ G A +H KYGF + ++N LI+ Y R G + ++++FD+M
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+ +LV+W ++ Y +G+ EA F +M P+ F S L AC +G
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/577 (36%), Positives = 322/577 (55%), Gaps = 33/577 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+ V N L++MY K G + R +FDE +N+V + ++S Y QHG A E + +L
Sbjct: 257 NTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEML 316
Query: 101 QYF-FPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
Q P++ ++ S + +C D GK HA + L+ ++NA+I+MY K E
Sbjct: 317 QKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKRE 376
Query: 156 A-WKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNE---------------- 197
A KVF++M + V++WNS+IA R +LE A+ +F +M
Sbjct: 377 AACKVFDSMSNKTVVTWNSLIAGLVRDGELEL-ALRIFGEMPESNLVSWNTMIGAMVQAS 435
Query: 198 --EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EEA+ L R++Q +G+ D T + AC L A +++ I K D +
Sbjct: 436 MFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGT 495
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
AL+ ++RCG + +VF+ M D+ +W + ++ A+ G AK A++LF M +V+
Sbjct: 496 ALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKA 555
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D FV+LL+A SH G V +G ++F +M + HGV PQ+ HY CMVDLLGR G + EA L
Sbjct: 556 DDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDL 615
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
++ MP++P+ VIW L +CRKH A A K+ QL P V +SNIY +G +
Sbjct: 616 MKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKW 675
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
N +R +MK +K G S IE+ + EF SG + H + I L+E+ ++ +
Sbjct: 676 NDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQV 735
Query: 493 GYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDC 552
GYVP+T+ L D++E+ KE L HSEKLA+ + ++N G + IR++KN+R+C DC
Sbjct: 736 GYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTG----KGIPIRVVKNLRMCSDC 791
Query: 553 HNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
H+F KL S L G+EI VRD+NR+H FK+ CSC D+W
Sbjct: 792 HSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 191/393 (48%), Gaps = 40/393 (10%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGY---LDDARHLF--DEMPKRNVVSWTALI 80
QLH +M+ + +F N LI + G L+ A + F DE K ++ + LI
Sbjct: 40 QLHCNMLK------KGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLI 93
Query: 81 SGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCD----YLHGKLVHALALKFSL 134
GYA G +E ++ ++ P+ F+ +L +C + G VH + +K L
Sbjct: 94 RGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGL 153
Query: 135 DAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
++VAN+LI+ Y+ +C D KVF+ M RNV+SW S+I + +
Sbjct: 154 VKDLFVANSLIHFYA-ACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA-------- 204
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+EA+ LF ++ G+ P+ T + ACA L V +L+ + G + +T+
Sbjct: 205 -----KEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTL 259
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ NAL+ Y +CG + +++FD+ + +LV +N+I+ Y HG A E L + M
Sbjct: 260 VVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKG 319
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA-CMVDLLGRVGRILE 368
+PD T +S ++AC+ G + G K H+ + +G + +LD+ + ++D+ + G+
Sbjct: 320 QRPDKVTMLSTIAACAQLGDLSVG-KSSHAYVFRNG-LERLDNISNAIIDMYMKCGKREA 377
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
A K+ M V W+ L+ + GE LA
Sbjct: 378 ACKVFDSMS-NKTVVTWNSLIAGLVRDGELELA 409
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
AC G + A ++ ++ N + D+ + L++M+++ G +A +F+ M KR+V
Sbjct: 465 ACGYLGALDLAKWIYTYIEKN--DIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDV 522
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHG-------KLV 125
+WTA I A GNA+ LF +L Q ++F ++L + + HG +L
Sbjct: 523 SAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTA--FSHGGYVDQGRQLF 580
Query: 126 HALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFR 179
A+ + + ++++ ++ +EA+ + ++M + N + W S +AA R
Sbjct: 581 WAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACR 636
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/579 (36%), Positives = 319/579 (55%), Gaps = 41/579 (7%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
GN+++A ++ M + + +N +I ++ G + +A LFDEM ++++V+W+A
Sbjct: 158 GNVEEAKHIYHQM------PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSA 211
Query: 79 LISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFS 133
LI+ + Q+ EE R F + + +E S L +C L GKL+H+L+LK
Sbjct: 212 LIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIG 271
Query: 134 LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
++++ + NALI MYSK C D A K+F+ ++ISWNSMI+ + C L A +F
Sbjct: 272 TESYINLQNALIYMYSK-CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIF 330
Query: 192 AKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
M ++ E L LF+++Q G PD T V+ ACA L
Sbjct: 331 DSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALE 390
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
VH+ I + G + ++ LI Y +CG + + +VF M + +WN+++ A
Sbjct: 391 QGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLA 450
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
++G + +L +FSNM +V P+ TF+ +L AC H GLV EG F+SM+ +H + P +
Sbjct: 451 MNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNV 510
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
HY CMVDLLGR G++ EAE+L+ MPM PD W LLG+C+KHG++ + KL +
Sbjct: 511 KHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE 570
Query: 411 LEPGDSLGF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
L+P D GF V +SNIY G ++ IR M RV K PG S IE +HEF +G
Sbjct: 571 LQP-DHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGD 629
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
K HP +AI L E+ +LK GY P+ + L D++EE KE L+ HSEKLA+ F ++N
Sbjct: 630 KTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLIN 689
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
+ IRIMKN+RIC DCH KL S ++IV
Sbjct: 690 ----ISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 199/445 (44%), Gaps = 88/445 (19%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L AC++ + +A Q+H H++ D++V N LIN ++ + DA +F+E
Sbjct: 81 YPLLIQACSIRRSEWEAKQVHNHVLK--LGFDSDVYVRNTLINCFSVCSNMTDACRVFNE 138
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
+ VSW ++++GY + GN EE ++ + P +AS
Sbjct: 139 SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM-----PERSIIAS--------------- 178
Query: 128 LALKFSLDAHVYVANALINMYS-KSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
N++I ++ + EA K+F+ M +++++W+++IA F Q
Sbjct: 179 --------------NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACF-------Q 217
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
E++ EEA+ F + + G+ D L ACA L+ +HSL K G
Sbjct: 218 QNEMY------EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIG 271
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY-------------- 292
E + NALI+ Y++CG I +++++FD+ DL+SWNS++ Y
Sbjct: 272 TESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFD 331
Query: 293 ------------ALHGQAK-----EALQLFSNMNV---QPDSATFVSLLSACSHAGLVQE 332
+ G A+ E L LF M + +PD T VS++SAC+ +++
Sbjct: 332 SMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQ 391
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G K H+ ++ +G+ + ++D+ + G + A ++ M +E W+ L+
Sbjct: 392 G-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILGL 449
Query: 393 RKHG--ETRLAELAATKLKQLEPGD 415
+G E+ L + K + P +
Sbjct: 450 AMNGLVESSLDMFSNMKKCHVTPNE 474
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D ++F +E N WN MI A+ + + A L++ + +
Sbjct: 29 DYTRRIFNFIENTNCFMWNMMIRAY-------------IQTNSPHFAFTLYKSMLSNYLG 75
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D T+ ++++AC+ +E A VH+ + K GF+ D + N LI+ ++ C +++ + +V
Sbjct: 76 ADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRV 135
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFV--SLLSACSHAGLVQ 331
F++ + D VSWNSIL Y G +EA ++ M P+ + S++ GLV
Sbjct: 136 FNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM---PERSIIASNSMIVLFGMRGLVV 192
Query: 332 EGNKVFHSMLENHGVV 347
E K+F MLE V
Sbjct: 193 EACKLFDEMLEKDMVT 208
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 328/563 (58%), Gaps = 33/563 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSLL-Q 101
V N + Y+K G L +A +F M R+ VSW ++I Y QH + L+ ++ +
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 102 YFFPNEFSLASVL---ISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCA---- 153
F + F+LASVL S D+L G+ H +K + +V + LI+ YSK
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGM 294
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
++ KVF+ + +++ WN+MI+ + + ++ EEA+ FRQ+QR G
Sbjct: 295 SDSEKVFQEILSPDLVLWNTMISGYSMNE------------EHSEEAVKSFRQMQRIGHR 342
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQ 272
PD C+F V AC+ L + +H L K + + + NALI Y + G++ +++
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARR 402
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD+M + VS+N ++K YA HG EAL+L+ M + P++ TFV++LSAC+H G
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGK 462
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V EG K F++M E + P+ +HY+CM+DLLGR G++ EAE+ I MP +P SV W+ LL
Sbjct: 463 VDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G+CRKH LAE AA +L ++P + +V ++N+Y +G + + +RK M+G R+RK
Sbjct: 523 GACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRK 582
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PG SWIE++ + H F + HP + + LEE++ ++K +GYV + A+ +E
Sbjct: 583 KPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAG 642
Query: 510 KEE---QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
+ E +L HHSEKLA+ F +M+ R+ I ++KN+RIC DCHN +K S + G+E
Sbjct: 643 EGEEEMRLGHHSEKLAVAFGLMST----RDGEEIVVVKNLRICGDCHNAIKFMSAVAGRE 698
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+VRD+ RFH FKD CSC DYW
Sbjct: 699 IIVRDNLRFHCFKDGKCSCGDYW 721
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 188/374 (50%), Gaps = 30/374 (8%)
Query: 37 NEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
E ++F N ++ YAK + AR LFDE P+ + VS+ LISGYA LF
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLF 128
Query: 97 CSLLQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK- 150
+ + F + F+L+ ++ +C D + K +H A+ D++ V NA + YSK
Sbjct: 129 KRMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKG 186
Query: 151 SCADEAWKVFENME-FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
EA VF M+ R+ +SWNSMI A + + K +AL L++++
Sbjct: 187 GLLREAVSVFYGMDGLRDEVSWNSMIVA-------------YGQHKEGAKALALYKEMIF 233
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG---S 266
+G D T + VL A L H + K GF ++ + + LI Y++CG
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDG 293
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQ-AKEALQLFSNMNV---QPDSATFVSLLS 322
+S S++VF ++ DLV WN+++ Y+++ + ++EA++ F M +PD +FV + S
Sbjct: 294 MSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACS+ +G ++ ++++ ++ ++ L + G +L+A ++ MP E ++
Sbjct: 354 ACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP-ELNA 412
Query: 383 VIWSVLLGSCRKHG 396
V ++ ++ +HG
Sbjct: 413 VSFNCMIKGYAQHG 426
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 139/301 (46%), Gaps = 36/301 (11%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
D GK +HAL +K + + Y++N +N+YSK C A F++ E NV S+N ++
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVK 82
Query: 177 AFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQREGMAPDWCT 218
A+ A +LF A + A+ LF++++ G D T
Sbjct: 83 AYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFT 142
Query: 219 FSIVLKAC---AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
S ++ AC L+ + H AV GF+ + + NA + Y++ G + + VF
Sbjct: 143 LSGLIAACCDRVDLIKQLHCFAVSG-----GFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 276 KMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
M D VSWNS++ AY H + +AL L+ M + D T S+L+A + +
Sbjct: 198 GMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG---RILEAEKLIREMPMEPDSVIWSVL 388
G + FH L G + ++D + G + ++EK+ +E+ + PD V+W+ +
Sbjct: 258 -GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEI-LSPDLVLWNTM 315
Query: 389 L 389
+
Sbjct: 316 I 316
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 324/581 (55%), Gaps = 33/581 (5%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A+ L+E M ++ +N LIN Y + G L AR +FDEMP R + +W A
Sbjct: 8 GDLPSAVALYERM------RKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNA 61
Query: 79 LISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFS 133
+I+G Q EE LF + F P+E++L SV L G+ +H A+K+
Sbjct: 62 MIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYG 121
Query: 134 LDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
L+ + V ++L +MY ++ + V +M RN+++WN++I A
Sbjct: 122 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN-------------A 168
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ E L+L++ ++ G P+ TF VL +C+ L +H+ K G
Sbjct: 169 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 228
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP 312
+ ++LI Y++CG + + + F + D V W+S++ AY HGQ EA++LF++M Q
Sbjct: 229 VVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQT 288
Query: 313 D----SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+ F++LL ACSH+GL +G ++F M+E +G P L HY C+VDLLGR G + +
Sbjct: 289 EMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQ 348
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
AE +I+ MP++PD VIW LL +C H +A+ ++ +++P DS +V ++N++
Sbjct: 349 AEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHAS 408
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
+ + +RK M+ V+K G+SW E + VH+F G + + + I+ L+EL +
Sbjct: 409 AKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLE 468
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
+K GY P+T+ LHD++EE KE L HSEKLA+ FA+M + E + IRI+KN+R+
Sbjct: 469 MKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALM----ILPEGAPIRIIKNLRV 524
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH K S ++ +EI +RD +RFHHF + CSC DYW
Sbjct: 525 CSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 328/581 (56%), Gaps = 33/581 (5%)
Query: 22 KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHLFDEMPKRNVVSWTA 78
++ MQ+ + I + +D+ LIN + + ARHLFD M + ++V + +
Sbjct: 45 RELMQIQAYAIKS---HQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNS 101
Query: 79 LISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFS 133
+ GY++ N E F LF +L+ P+ ++ S+L +C G+ +H L++K
Sbjct: 102 IARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 161
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+D +VYV LINMY++ D A VF+ + V+ +N+MI + A
Sbjct: 162 VDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGY-------------A 208
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ EAL LFR++Q + + P+ T VL +CA L + +H K+GF
Sbjct: 209 RRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVK 268
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ ALI +A+CGS+ + +F+ M Y D +W++++ AYA HGQA+ ++ +F M N
Sbjct: 269 VNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSEN 328
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
VQPD TF+ LL+ACSH GLV+EG + F M+ G+VP + HY MVDLLGR G + +A
Sbjct: 329 VQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDA 388
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
+ I ++P+ P ++W +LL +C H LAE + ++ +L+ +V +SN+Y +
Sbjct: 389 YEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARN 448
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
+ +RK MK + K PG S IE+ N VHEF SG + + L+E++ +L
Sbjct: 449 KKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKEL 508
Query: 490 KGMGYVPETSLALH-DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
K GYVP+TS+ +H D+ ++ KE L +HSEKLA+ F ++N + IR++KN+R+
Sbjct: 509 KLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPP----GTTIRVVKNLRV 564
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH+ KL S + G+++V+RD RFHHF+D CSC D+W
Sbjct: 565 CRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/585 (36%), Positives = 318/585 (54%), Gaps = 40/585 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D ++ N ++ FG + + +F + + N+ + +I G + + +E ++ S+
Sbjct: 40 EDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSM 99
Query: 100 L-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
+ P+ F+ +L +C D G +H L +K ++ +V +L+++Y K C
Sbjct: 100 RKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGK-CGF 158
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAF--------------RACKL-----------EAQA 187
D A+KVF+++ +NV +W ++I+ + RAC + +
Sbjct: 159 IDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSM 218
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I+ +A +EAL LF ++ EG PD VL ACA L + +L+ + F
Sbjct: 219 IQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEF 278
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ V+ ALI YA+CG + + +VF M D+V WN+ + A+ G K A LF
Sbjct: 279 LGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQ 338
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M ++PD TFV LL AC+HAGLV EG + F+SM + P+++HY CMVDLLGR G
Sbjct: 339 MEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAG 398
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
+ EA +L++ MPME ++++W LLG CR H +T+L E +L LEP +S +V +SN
Sbjct: 399 FLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSN 458
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
IY S + A IR M ++K PG SWIE++ VHEF G HP E I+ KL E
Sbjct: 459 IYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGE 518
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
L+ LK GYVP T L DIEEE KE + HSEKLA+ F +++ IR++K
Sbjct: 519 LVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAP----NDKIRVVK 574
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N+R+C DCH +K S G+EI+VRD+NRFH F D CSC DYW
Sbjct: 575 NLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/629 (35%), Positives = 342/629 (54%), Gaps = 57/629 (9%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMY--AKFGYL 58
L+S Q+ +C IKQ H H+I P N L+ + + FG L
Sbjct: 12 LNSNQLQLFSLESCKSMNQIKQT---HAHLITTGLILHP---ITANKLLKVLIASSFGSL 65
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQ-HGNAEECFRLFCSLLQY--FFPNEFSLASVLI 115
A LFD++PK +V + +I +A ++ R+F S+++ F PN ++ V
Sbjct: 66 SYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFK 125
Query: 116 SCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVIS 170
+C L G+ + A+K L+++++V NA+I MY+ DEA +VF+ +++ S
Sbjct: 126 ACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYS 185
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGM 212
WN MI + +A E+F +M + EAL LF ++ + G
Sbjct: 186 WNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGP 245
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ T + L ACA LV +H I K + + + +L+ YA+CG I + +
Sbjct: 246 PPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAK 305
Query: 273 VFDKMTYHD-------LVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLS 322
VF HD + WN+++ YA+HG++KEA+ LF M V+ P+ TFV+LL+
Sbjct: 306 VF-----HDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLN 360
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACSH LV+EG F SM ++G+ P+++HY CMVDLLGR G + EAE+ + MPM PD+
Sbjct: 361 ACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDA 420
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG-FVQMSNIYCLSGSFNKARLIRKE 441
IW LLG+CR H + + +K+L+ D +G V ++N+Y SG +++A+ +R++
Sbjct: 421 TIWGALLGACRIHKDIERGQRIGKIIKELD-SDHIGCHVLLANLYSASGQWDEAKAVRQK 479
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
++ S +K PG S IE+ H+F G + HPQ + ++ L+E+ +LK GYVPE
Sbjct: 480 IEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEV 539
Query: 502 LHDI-EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLAS 560
L DI +EE KE L HSEKLA+ F ++N + IRI+KN+R+C DCH K S
Sbjct: 540 LLDIDDEEDKETALSKHSEKLAIAFGLIN----TPPGTAIRIVKNLRVCADCHEATKFIS 595
Query: 561 DLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +EI+VRD R+HHFKD CSC DYW
Sbjct: 596 KVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/613 (34%), Positives = 330/613 (53%), Gaps = 44/613 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+ L ++C L M + + P +D +I Y + L AR L + M
Sbjct: 182 SPLVNSCVL-------MAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGM 234
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCD----YLHGK 123
V+W A+ISGY G EE F L + +E++ SV+ + + G+
Sbjct: 235 TDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGR 294
Query: 124 LVHALALKFSLDAH----VYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAA 177
VHA L+ + + V NALI +Y++ C EA +VF+ M ++++SWN++++
Sbjct: 295 QVHAYVLRTVVQPSGHFVLSVNNALITLYTR-CGKLVEARRVFDKMPVKDLVSWNAILSG 353
Query: 178 FRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTF 219
+ +A +F +M EE L LF Q++ EG+ P +
Sbjct: 354 CVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAY 413
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ + +C+ L + + +HS I + G + + NALI Y+RCG + + VF M Y
Sbjct: 414 AGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY 473
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D VSWN+++ A A HG +A+QL+ M ++ PD TF+++LSACSHAGLV+EG
Sbjct: 474 VDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHY 533
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F +M +G+ P+ DHY+ ++DLL R G EA+ + MP EP + IW LL C HG
Sbjct: 534 FDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHG 593
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
L AA +L +L P ++ +SN+Y G +++ +RK M+ V+K PG SWI
Sbjct: 594 NMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWI 653
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
E+EN VH F HP+ A+++ LE+L+ +++ +GYVP+T LHD+E E KE L
Sbjct: 654 EVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALST 713
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+V+ IM + IR+ KN+RIC DCHN K S ++ +EI+VRD RFH
Sbjct: 714 HSEKLAVVYGIMK----LPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFH 769
Query: 577 HFKDRICSCNDYW 589
HF++ CSC++YW
Sbjct: 770 HFRNGECSCSNYW 782
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 60/380 (15%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNF--PNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y ++ A + G Q+H +++ P+ L V N LI +Y + G L +AR +F
Sbjct: 277 YTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVF 336
Query: 66 DEMPKRNVVS-------------------------------WTALISGYAQHGNAEECFR 94
D+MP +++VS WT +ISG AQ+G EE +
Sbjct: 337 DKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLK 396
Query: 95 LFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYS 149
LF + L+ P +++ A + SC L +G+ +H+ ++ D+ + V NALI MYS
Sbjct: 397 LFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYS 456
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
+ + A VF M + + +SWN+MIAA QAI+L+ KM E+
Sbjct: 457 RCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKED---------- 506
Query: 209 REGMAPDWCTFSIVLKAC--AGLVTE-RHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ PD TF +L AC AGLV E RH ++ YG + + LI R G
Sbjct: 507 ---ILPDRITFLTILSACSHAGLVKEGRH--YFDTMRVCYGITPEEDHYSRLIDLLCRAG 561
Query: 266 SISLSKQVFDKMTYHDLVS-WNSILKAYALHGQAKEALQLFSN-MNVQP-DSATFVSLLS 322
S +K V + M + W ++L +HG + +Q + + P T++SL +
Sbjct: 562 MFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSN 621
Query: 323 ACSHAGLVQEGNKVFHSMLE 342
+ G E +V M E
Sbjct: 622 MYAALGQWDEVARVRKLMRE 641
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 204/483 (42%), Gaps = 117/483 (24%)
Query: 24 AMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISG 82
A +H H++ + F P + N LI+ Y K + AR+LFD++PK ++V+ T ++S
Sbjct: 15 ARAVHAHILTSGFKPFP---LIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSA 71
Query: 83 YAQHGNAEECFRLFCSL--------------------------LQY--------FFPNEF 108
Y+ GN + +LF + LQ F P+ F
Sbjct: 72 YSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPF 131
Query: 109 SLASV-----LISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-------- 155
+ +SV LI+ + H + +H K+ + V NAL++ Y SCA
Sbjct: 132 TFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYV-SCASSPLVNSCVL 190
Query: 156 ---AWKVFENME--FRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------- 197
A K+F+ R+ +W ++IA + A EL M +
Sbjct: 191 MAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYV 250
Query: 198 -----EEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVT---ERHASAVHSLIAKYGF 247
EEA L R++ G+ D T++ V+ A AGL + HA + +++ G
Sbjct: 251 HRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGH 310
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+V NALI Y RCG + +++VFDKM DLVSWN+IL + +EA +F
Sbjct: 311 FVLSV-NNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFRE 369
Query: 308 MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSM------------------------LEN 343
M V+ T+ ++S + G +EG K+F+ M L+N
Sbjct: 370 MPVR-SLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDN 428
Query: 344 ----HGVVPQLDHYA------CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
H + QL H + ++ + R G + A+ + MP DSV W+ ++ +
Sbjct: 429 GQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAMIAALA 487
Query: 394 KHG 396
+HG
Sbjct: 488 QHG 490
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/595 (34%), Positives = 331/595 (55%), Gaps = 31/595 (5%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFP-NEPQDLFVTNHLINMYAKFGYLDDARH 63
+ + ACA G++ A + + F +D+FV + L+++Y++ G + DA
Sbjct: 111 STTFTLALTACARLGDLDAAEAVR---VRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----D 118
+FD MP+++ V+W+ +++G+ G E ++ + ++ +E + V+ +C +
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGN 227
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAA 177
G VH L+ + V +A +L++MY+K+ D A +VF M +RN +SWN++I+
Sbjct: 228 TRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISG 287
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F A+ + +EAL LFR++ G+ PD L ACA + + +
Sbjct: 288 F-------------AQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKS 334
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H I + E ++ A++ Y++CGS+ ++++F+K++ DLV WN+++ HG
Sbjct: 335 IHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGC 393
Query: 298 AKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+AL LF +N ++PD ATF SLLSA SH+GLV+EG F M+ G+ P H
Sbjct: 394 GHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCV 453
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VDLL R G + EA +++ M EP IW LL C + + L E A K+ + +P
Sbjct: 454 CVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPE 513
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D +SN+Y + ++K R IRK MK S +K PG S IE+ H F + HPQ
Sbjct: 514 DIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQ 573
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I K + +L +++ MGYVP T HD++E+ KE+ L +HSE+LA+ F ++N
Sbjct: 574 HQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGT 633
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R + I+KN+R+C DCH+ +K S ++ +EIVVRD+ RFHHFKD CSC DYW
Sbjct: 634 R----LVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 184/377 (48%), Gaps = 42/377 (11%)
Query: 37 NEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRN--VVSWTALISGYAQHGNAEECFR 94
+ Q+LF + L YA+ G LD A P + +W AL++ ++ G+ R
Sbjct: 41 SSSQNLFPS--LAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALR 98
Query: 95 LFCSLLQYFFPNEFSLASVLISC------DYLHGKLVHALALKFSLDAHVYVANALINMY 148
+F +L P+ + L +C D V A A + D V+V +AL+++Y
Sbjct: 99 VFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRD--VFVCSALLHVY 156
Query: 149 SKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
S+ A +A +VF+ M ++ ++W++M+A F + +A+ ++++M+
Sbjct: 157 SRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMRE----------- 205
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
G+A D V++AC R ++VH ++G D VIA +L+ YA+ G
Sbjct: 206 --HGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHF 263
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSAC 324
+++QVF M Y + VSWN+++ +A +G A EAL LF M+ +QPDS VS L AC
Sbjct: 264 DVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLAC 323
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACM-----VDLLGRVGRILEAEKLIREMPME 379
+ G ++ G + HG + + + C+ +D+ + G + A KL ++
Sbjct: 324 ADVGFLKLGKSI-------HGFILRRLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSR 376
Query: 380 PDSVIWSVLLGSCRKHG 396
D V+W+ ++ C HG
Sbjct: 377 -DLVLWNAMIACCGTHG 392
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/582 (35%), Positives = 332/582 (57%), Gaps = 32/582 (5%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G + ++H + + N+ + +L + N LI+MY+K + A +FD+M ++++SWT
Sbjct: 227 GYLLNGKEIHAYAMKNWLD--SNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTT 284
Query: 79 LISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFS 133
+I+ YAQ+ E +L + + + + S L++C L H K VH LK
Sbjct: 285 VIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG 344
Query: 134 LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
L + + + N +I++Y+ C + A ++FE+++ ++V+SW SMI+ + L
Sbjct: 345 L-SDLMMQNMIIDVYA-DCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLA------- 395
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
EAL +F ++ + PD T +L A A L +H I + GF +
Sbjct: 396 ------NEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEG 449
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ 311
N+L+ YA CGS+ + +VF LV W +++ AY +HG+ K A++LFS M Q
Sbjct: 450 STVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQ 509
Query: 312 ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
PD TF++LL ACSH+GL+ EG ++ +M + + P +HYAC+VDLLGR + E
Sbjct: 510 KLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEE 569
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A ++ M +EP + +W LG+CR H +L E+AA KL L+P +V +SN++
Sbjct: 570 AYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAA 629
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
SG + +R MKG ++K PG SWIE+ N+VH F K HP+ I++KL ++ +
Sbjct: 630 SGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEK 689
Query: 489 L-KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
L K GYVP+T L LH++ +E K + LY HSE+LA+ + +M+ E + IRI KN+R
Sbjct: 690 LEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTS----EGTPIRITKNLR 745
Query: 548 ICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+CVDCH F KL S +E++VRD++RFHHF+D +CSC D+W
Sbjct: 746 VCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 229/450 (50%), Gaps = 28/450 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+T AC K M++H ++ + N+ D++V N L+ M+ +FG + A
Sbjct: 111 NTYTLVAALQACEDSSFKKLGMEIHAAILKS--NQVLDVYVANALVAMHVRFGKMSYAAR 168
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD---- 118
+FDE+ +++ ++W ++I+G+ Q+G E + FC L P+E SL S+L +
Sbjct: 169 IFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGY 228
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
L+GK +HA A+K LD+++ + N LI+MYSK C A VF+ M +++ISW ++IAA
Sbjct: 229 LLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAA 288
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+A+ EAL L R++Q +GM D L AC+GL HA
Sbjct: 289 -------------YAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKE 335
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH K G D ++ N +I YA CG+I+ + ++F+ + D+VSW S++ Y +G
Sbjct: 336 VHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGL 394
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A EAL +F M +V+PDS T VS+LSA + + +G ++ H + G + +
Sbjct: 395 ANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEI-HGFIFRKGFMLEGSTVN 453
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEP 413
+VD+ G + A K+ V+W+ ++ + HG + A EL + Q
Sbjct: 454 SLVDMYACCGSLENAYKVFI-CTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLI 512
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
D + F+ + SG N+ + + + MK
Sbjct: 513 PDHITFLALLYACSHSGLINEGKRLLETMK 542
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 149/556 (26%), Positives = 249/556 (44%), Gaps = 45/556 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC + +I + ++H +I +FV N L++MYAK + AR LFD
Sbjct: 13 FPCVLKACGVVEDIHRGAEIHGLIIK--CGYDSIVFVANSLVSMYAKCNDILGARKLFDR 70
Query: 68 MPKRN-VVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC-DYLHGKL 124
M +RN VVSW ++IS Y+ +G E LF + + N ++L + L +C D KL
Sbjct: 71 MNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKL 130
Query: 125 ---VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
+HA LK + VYVANAL+ M+ + A ++F+ ++ ++ I+WNSMIA F
Sbjct: 131 GMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQ 190
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L +A++ F LQ + PD + +L A L + +H+
Sbjct: 191 NGLYNEALQFFCG-------------LQDANLKPDEVSLISILAASGRLGYLLNGKEIHA 237
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K + + I N LI Y++C ++ + VFDKM DL+SW +++ AYA + E
Sbjct: 238 YAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTE 297
Query: 301 ALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+L + + D+ S L ACS + +V H G + L ++
Sbjct: 298 ALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEV-HGYTLKRG-LSDLMMQNMII 355
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH---GETRLAELAATKLKQLEPG 414
D+ G I A ++ + + D V W+ ++ SC H L K +EP
Sbjct: 356 DVYADCGNINYATRMFESIKCK-DVVSWTSMI-SCYVHNGLANEALGVFYLMKETSVEP- 412
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHP 473
DS+ V + + + NK KE+ G RK L + + V +A G +
Sbjct: 413 DSITLVSILSAAASLSALNKG----KEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENA 468
Query: 474 QREAIFKKLEELIGQLK-----GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+ I + + L+ GM + ++ L I E+ K + H LAL++A
Sbjct: 469 YKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQK--LIPDHITFLALLYACS 526
Query: 529 NQGSLCRERSVIRIMK 544
+ G + + ++ MK
Sbjct: 527 HSGLINEGKRLLETMK 542
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 134/248 (54%), Gaps = 24/248 (9%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKV 159
+ F+ VL +C D G +H L +K D+ V+VAN+L++MY+K C D A K+
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAK-CNDILGARKL 67
Query: 160 FENMEFRN-VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
F+ M RN V+SWNS+I+A+ L Q +E AL LFR++Q+ G+ + T
Sbjct: 68 FDRMNERNDVVSWNSIISAY---SLNGQCME----------ALGLFREMQKAGVGANTYT 114
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
L+AC ++ +H+ I K D +ANAL+ + R G +S + ++FD++
Sbjct: 115 LVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELD 174
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
D ++WNS++ + +G EALQ F + N++PD + +S+L+A G + G +
Sbjct: 175 EKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKE 234
Query: 336 VFHSMLEN 343
+ ++N
Sbjct: 235 IHAYAMKN 242
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASA-VHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
G+ D TF VLKAC G+V + H A +H LI K G++ +AN+L+ YA+C I
Sbjct: 5 GVPFDSFTFPCVLKAC-GVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILG 63
Query: 270 SKQVFDKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
++++FD+M +D+VSWNSI+ AY+L+GQ EAL LF M V ++ T V+ L AC
Sbjct: 64 ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEAEKLIREMPMEPDSV 383
+ + G ++ ++L+++ V LD Y +V + R G++ A ++ E+ E D++
Sbjct: 124 DSSFKKLGMEIHAAILKSNQV---LDVYVANALVAMHVRFGKMSYAARIFDELD-EKDNI 179
Query: 384 IWSVLLGSCRKHG 396
W+ ++ ++G
Sbjct: 180 TWNSMIAGFTQNG 192
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/564 (38%), Positives = 313/564 (55%), Gaps = 33/564 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN-----AEECFRL 95
D+ V L++ YAK G L+DA +F MP NVV + A+I+G+ Q A E L
Sbjct: 257 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 316
Query: 96 FCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK 150
F + P+EF+ +S+L +C + GK +HA K++L + ++ NAL+ +YS
Sbjct: 317 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 376
Query: 151 SCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
S + ++ K F + +V+SW S+I + E L LF +L
Sbjct: 377 SGSIEDGLKCFHSTPKLDVVSWTSLIVGH-------------VQNGQFEGGLTLFHELLF 423
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
G PD T SI+L ACA L + +H+ K G + T+I N+ I YA+CG I
Sbjct: 424 SGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDS 483
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ F + D+VSW+ ++ + A HG AKEA+ LF M + P+ TF+ +L ACSH
Sbjct: 484 ANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSH 543
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
GLV+EG + F M ++HG+ P + H AC+VDLLGR GR+ EAE I + E D V+W
Sbjct: 544 GGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 603
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL +CR H T + A ++ +LEP + +V + NIY +G A IR MK
Sbjct: 604 SLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRG 663
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
V+K PGLSWIE+ N VH F +G + HP + I+ +LEE++ ++K + Y+ E L E
Sbjct: 664 VKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDE-KLVSDASE 722
Query: 507 EEHKEEQLY-HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+HK+ + +HSEKLA+ F I+ SL R V R+MKN+R C CH MKL S L +
Sbjct: 723 PKHKDNSMVSYHSEKLAVTFGII---SLPRSAPV-RVMKNLRSCWHCHETMKLFSRLENR 778
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI++RD RFH F+D CSC DYW
Sbjct: 779 EIILRDPIRFHRFRDGSCSCGDYW 802
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 226/550 (41%), Gaps = 103/550 (18%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L G++ H HMI LF+ N+L+ MY K G D A+ LFD
Sbjct: 22 YTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPC--LFLLNNLLYMYCKCGETDVAKKLFDR 79
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-------CSLLQYFFPNEFSLASVLISCDYL 120
MPKRNVVSW +LISGY Q G E LF L ++ F N S+ + D
Sbjct: 80 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTL--DLR 137
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAF 178
G+L+HAL L V + N+LI+MY K C W VFE+ + + +SWNS+IA
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCK-CGRIDWARLVFESADELDSVSWNSLIAG- 195
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE--RHAS 236
+ ++ + +E L L ++ R G+ + LKAC +
Sbjct: 196 ------------YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGK 243
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H K G + D V+ AL+ YA+ G + + ++F M ++V +N+++ +
Sbjct: 244 MLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQME 303
Query: 297 Q-----AKEALQLFSNM---NVQPDSATFVSLLSACS-----------HA---------- 327
A EA+ LF M ++P TF S+L ACS HA
Sbjct: 304 TMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSD 363
Query: 328 --------------GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV--GRILEAEK 371
G +++G K FHS P+LD + ++G V G+
Sbjct: 364 EFIGNALVELYSLSGSIEDGLKCFHS-------TPKLDVVSWTSLIVGHVQNGQFEGGLT 416
Query: 372 LIREM---PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNI--Y 426
L E+ +PD S++L +C + E + G+ +Q S I Y
Sbjct: 417 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN-FTIIQNSQICMY 475
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI 486
G + A + KE K + +SW + +S + +EA+ +L
Sbjct: 476 AKCGDIDSANMTFKETKNPDI-----VSWSVM------ISSNAQHGCAKEAV-----DLF 519
Query: 487 GQLKGMGYVP 496
+KG G P
Sbjct: 520 ELMKGSGIAP 529
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 167/350 (47%), Gaps = 28/350 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ AC+ + Q+H + N D F+ N L+ +Y+ G ++D F
Sbjct: 332 FSSILKACSTIEAFECGKQIHAQIFKY--NLQSDEFIGNALVELYSLSGSIEDGLKCFHS 389
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HG 122
PK +VVSWT+LI G+ Q+G E LF LL P+EF+++ +L +C L G
Sbjct: 390 TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG 449
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA A+K + + N+ I MY+K C D A F+ + +++SW+ MI++
Sbjct: 450 EQIHAYAIKTGIGNFTIIQNSQICMYAK-CGDIDSANMTFKETKNPDIVSWSVMISSNAQ 508
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA-GLVTERHASAVH 239
+A++LF MK G+AP+ TF VL AC+ G + E
Sbjct: 509 HGCAKEAVDLFELMKG-------------SGIAPNHITFLGVLVACSHGGLVEEGLRYFE 555
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQ-VFDKMTYHDLVSWNSILKAYALHGQA 298
+ +G + + ++ R G ++ ++ + D D V W S+L A +H
Sbjct: 556 IMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKAT 615
Query: 299 KEALQLFSN-MNVQPD-SATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
++ + ++P+ +A++V L + + AG+ ++ +++++ GV
Sbjct: 616 DTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEI-RNLMKDRGV 664
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 5/189 (2%)
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ D T++ +++ + H H + K F+ + N L++ Y +CG ++
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
K++FD+M ++VSWNS++ Y G E + LF +++ D TF + LS C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
++ G ++ H+++ G+ + ++D+ + GRI + +L+ E E DSV W+
Sbjct: 134 LDLRLG-RLIHALITVSGLGGPVLLTNSLIDMYCKCGRI-DWARLVFESADELDSVSWNS 191
Query: 388 LLGSCRKHG 396
L+ + G
Sbjct: 192 LIAGYVRIG 200
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/564 (38%), Positives = 313/564 (55%), Gaps = 33/564 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN-----AEECFRL 95
D+ V L++ YAK G L+DA +F MP NVV + A+I+G+ Q A E L
Sbjct: 178 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237
Query: 96 FCSLLQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK 150
F + P+EF+ +S+L +C + GK +HA K++L + ++ NAL+ +YS
Sbjct: 238 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 297
Query: 151 SCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
S + ++ K F + +V+SW S+I + E L LF +L
Sbjct: 298 SGSIEDGLKCFHSTPKLDVVSWTSLIVGH-------------VQNGQFEGGLTLFHELLF 344
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
G PD T SI+L ACA L + +H+ K G + T+I N+ I YA+CG I
Sbjct: 345 SGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDS 404
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ F + D+VSW+ ++ + A HG AKEA+ LF M + P+ TF+ +L ACSH
Sbjct: 405 ANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSH 464
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
GLV+EG + F M ++HG+ P + H AC+VDLLGR GR+ EAE I + E D V+W
Sbjct: 465 GGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 524
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL +CR H T + A ++ +LEP + +V + NIY +G A IR MK
Sbjct: 525 SLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRG 584
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
V+K PGLSWIE+ N VH F +G + HP + I+ +LEE++ ++K + Y+ E L E
Sbjct: 585 VKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDE-KLVSDASE 643
Query: 507 EEHKEEQLY-HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+HK+ + +HSEKLA+ F I+ SL R V R+MKN+R C CH MKL S L +
Sbjct: 644 PKHKDNSMVSYHSEKLAVTFGII---SLPRSAPV-RVMKNLRSCWHCHETMKLFSRLENR 699
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI++RD RFH F+D CSC DYW
Sbjct: 700 EIILRDPIRFHRFRDGSCSCGDYW 723
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 191/366 (52%), Gaps = 21/366 (5%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
+ +TN LI+MY K G +D AR +F+ + + VSW +LI+GY + G+ +E RL +L+
Sbjct: 76 VLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLR 135
Query: 102 YFFP-NEFSLASVLISCDYLH------GKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ N ++L S L +C GK++H A+K LD V V AL++ Y+K
Sbjct: 136 HGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDL 195
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
++A K+F+ M NV+ +N+MIA F ++E A E FA EA++LF ++Q GM
Sbjct: 196 EDATKIFKLMPDPNVVMYNAMIAGF--LQMETMADE-FAN-----EAMYLFFEMQSRGMK 247
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P TFS +LKAC+ + +H+ I KY + D I NAL+ Y+ GSI +
Sbjct: 248 PSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKC 307
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F D+VSW S++ + +GQ + L LF + +PD T +LSAC++ V
Sbjct: 308 FHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAV 367
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ G ++ H+ G+ + + + G I A +E PD V WSV++
Sbjct: 368 KSGEQI-HAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK-NPDIVSWSVMIS 425
Query: 391 SCRKHG 396
S +HG
Sbjct: 426 SNAQHG 431
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 200/490 (40%), Gaps = 101/490 (20%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-------CSLLQYFFPNEFSLASVLISCDYL 120
MPKRNVVSW +LISGY Q G E LF L ++ F N S+ + D
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTL--DLR 58
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWK--VFENMEFRNVISWNSMIAAF 178
G+L+HAL L V + N+LI+MY K C W VFE+ + + +SWNS+IA
Sbjct: 59 LGRLIHALITVSGLGGPVLLTNSLIDMYCK-CGRIDWARLVFESADELDSVSWNSLIAG- 116
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE--RHAS 236
+ ++ + +E L L ++ R G+ + LKAC +
Sbjct: 117 ------------YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGK 164
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H K G + D V+ AL+ YA+ G + + ++F M ++V +N+++ +
Sbjct: 165 MLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQME 224
Query: 297 Q-----AKEALQLFSNM---NVQPDSATFVSLLSACS-----------HA---------- 327
A EA+ LF M ++P TF S+L ACS HA
Sbjct: 225 TMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSD 284
Query: 328 --------------GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV--GRILEAEK 371
G +++G K FHS P+LD + ++G V G+
Sbjct: 285 EFIGNALVELYSLSGSIEDGLKCFHS-------TPKLDVVSWTSLIVGHVQNGQFEGGLT 337
Query: 372 LIREM---PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNI--Y 426
L E+ +PD S++L +C + E + G+ +Q S I Y
Sbjct: 338 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN-FTIIQNSQICMY 396
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI 486
G + A + KE K + +SW + +S + +EA+ +L
Sbjct: 397 AKCGDIDSANMTFKETKNPDI-----VSWSVM------ISSNAQHGCAKEAV-----DLF 440
Query: 487 GQLKGMGYVP 496
+KG G P
Sbjct: 441 ELMKGSGIAP 450
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 167/350 (47%), Gaps = 28/350 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ AC+ + Q+H + N D F+ N L+ +Y+ G ++D F
Sbjct: 253 FSSILKACSTIEAFECGKQIHAQIFKY--NLQSDEFIGNALVELYSLSGSIEDGLKCFHS 310
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HG 122
PK +VVSWT+LI G+ Q+G E LF LL P+EF+++ +L +C L G
Sbjct: 311 TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG 370
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA A+K + + N+ I MY+K C D A F+ + +++SW+ MI++
Sbjct: 371 EQIHAYAIKTGIGNFTIIQNSQICMYAK-CGDIDSANMTFKETKNPDIVSWSVMISSNAQ 429
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA-GLVTERHASAVH 239
+A++LF MK G+AP+ TF VL AC+ G + E
Sbjct: 430 HGCAKEAVDLFELMKG-------------SGIAPNHITFLGVLVACSHGGLVEEGLRYFE 476
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQ-VFDKMTYHDLVSWNSILKAYALHGQA 298
+ +G + + ++ R G ++ ++ + D D V W S+L A +H
Sbjct: 477 IMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKAT 536
Query: 299 KEALQLFSN-MNVQPD-SATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
++ + ++P+ +A++V L + + AG+ ++ +++++ GV
Sbjct: 537 DTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEI-RNLMKDRGV 585
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/589 (35%), Positives = 330/589 (56%), Gaps = 30/589 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
L A GN+ ++H + I N + ++ + N LI+MYAK + + F+ M +
Sbjct: 355 LIAASGRSGNLLNGKEVHAYAIRNGLD--SNMQIGNTLIDMYAKCCCVKHMGYAFECMHE 412
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGK----LV 125
++++SWT +I+GYAQ+ E LF + ++ + + SVL +C L + +
Sbjct: 413 KDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREI 472
Query: 126 HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H K L A + + NA++N+Y + D A + FE++ ++++SW SMI L
Sbjct: 473 HGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLP 531
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+A+ELF +K + + PD L A A L + + +H + +
Sbjct: 532 VEALELFYSLK-------------QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GF + IA++L+ YA CG++ S+++F + DL+ W S++ A +HG EA+ L
Sbjct: 579 KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIAL 638
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M NV PD TF++LL ACSH+GL+ EG + F M + + P +HYACMVDLL
Sbjct: 639 FKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLS 698
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R + EA + +R MP++P S +W LLG+C H L ELAA +L Q + +S +
Sbjct: 699 RSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYAL 758
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNI+ G +N +R MKG+ ++K PG SWIE++N++H F + K HPQ + I+ K
Sbjct: 759 ISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLK 818
Query: 482 LEELIGQL-KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
L + L K GY+ +T H++ EE K + LY HSE+LAL + ++ + + + I
Sbjct: 819 LAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLL----VTPKGTSI 874
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RI KN+RIC DCH F K+AS++ + +VVRD+NRFHHF+ +CSC D+W
Sbjct: 875 RITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 174/367 (47%), Gaps = 31/367 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ L C + Q QLH ++ + + F+ L++MY K G L DA +FDE
Sbjct: 49 HSLLLDLCVAVKALPQGQQLHARLLKSHLSA----FLATKLLHMYEKCGSLKDAVKVFDE 104
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----G 122
M +R + +W A++ + G E L+ + + + + SVL +C L G
Sbjct: 105 MTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFEN--MEFRNVISWNSMIAAF 178
+H +A+K V+V NALI MY K C D A +F+ ME + +SWNS+I+A
Sbjct: 165 AEIHGVAVKCGFGEFVFVCNALIAMYGK-CGDLGGARVLFDGIMMEKEDTVSWNSIISAH 223
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
E + +E AL LFR++Q G+A + TF L+ + +
Sbjct: 224 VT---EGKCLE----------ALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H K D +ANALI YA+CG + +++VF M D VSWN++L +
Sbjct: 271 HGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELY 330
Query: 299 KEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
++AL F +M +PD + ++L++A +G + G +V H+ +G+ +
Sbjct: 331 RDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEV-HAYAIRNGLDSNMQIGNT 389
Query: 356 MVDLLGR 362
++D+ +
Sbjct: 390 LIDMYAK 396
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/601 (34%), Positives = 339/601 (56%), Gaps = 39/601 (6%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINN----FPNEPQDLFVTNHLINMYAKFGYL 58
H+ L + A +I + +QLH +++ + P V N+LIN Y+K
Sbjct: 13 HNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIP------LVANNLINFYSKSQLP 66
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC 117
D+R F++ P+++ +W+++IS +AQ+ ++ P++ L S SC
Sbjct: 67 FDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSC 126
Query: 118 DYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISW 171
L GK VH L++K DA V+V ++L++MY+K C + A K+F+ M RNV++W
Sbjct: 127 GILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAK-CGEIVYARKMFDEMPLRNVVTW 185
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
+ M+ + A+M EEAL+LF++ E +A + +FS V+ CA
Sbjct: 186 SGMMYGY-------------AQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTL 232
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+ L K F+ + + ++L+ Y++CG + + QVFD++ +L WN++LKA
Sbjct: 233 LELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKA 292
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
A H ++ ++LF M ++P+ TF+++L+ACSHAGLV EG F M E+ + P
Sbjct: 293 CAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESR-IEP 351
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
HYA +VD+LGR G++ EA +++ MP++P +W LL SC H T LA AA K+
Sbjct: 352 TDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELAAFAADKV 411
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
+L P S + +SN Y G F A RK ++ +K GLSW+E N+VH FA+G
Sbjct: 412 FELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAG 471
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+RH + + I++KL EL +++ GYV +TS L +++ + K + + +HSE+LA+ F ++
Sbjct: 472 ERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSERLAIAFGLI 531
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ +R IR+MKN+R+C DCHN +K S + I+VRD+NRFH F+D CSCNDY
Sbjct: 532 ---TFPADRP-IRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFHRFEDGKCSCNDY 587
Query: 589 W 589
W
Sbjct: 588 W 588
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/581 (34%), Positives = 328/581 (56%), Gaps = 30/581 (5%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G + ++H + I N ++ V N LI+MYAK + FD M ++++SWT
Sbjct: 275 GYLLNGKEIHAYAIKN--GFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTT 332
Query: 79 LISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH--GKL--VHALALKFS 133
+GYAQ+ + L L ++ + + S+L++C L+ GK+ +H ++
Sbjct: 333 AAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGG 392
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
L V + N +I++Y + D A ++FE++E ++V+SW SMI+ + L +A+E+F+
Sbjct: 393 LSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFS 451
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
MK G+ PD+ T +L A L T + +H I + GF +
Sbjct: 452 SMK-------------ETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGS 498
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN--- 309
I+N L+ YARCGS+ + ++F +L+ W +++ AY +HG + A++LF M
Sbjct: 499 ISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEK 558
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ PD TF++LL ACSH+GLV EG M + + P +HY C+VDLLGR + EA
Sbjct: 559 IIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEA 618
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
++++ M EP +W LLG+CR H + E+AA KL +L+ + +V +SN++ +
Sbjct: 619 YQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAAN 678
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
G + +R MKGS + K PG SWIE+ N++H F S K HP+ + I++KL ++ +L
Sbjct: 679 GRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKL 738
Query: 490 K-GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
K GYV +T LH++ EE K + LY HSE+LA+ + ++ E + IR+ KN+R+
Sbjct: 739 KREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATA----EGTPIRVTKNLRV 794
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH+F L S +E++VRD++RFHHFKD +CSC D+W
Sbjct: 795 CGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 222/451 (49%), Gaps = 30/451 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+T +A AC IK MQ+H ++ + D++V N L+ MY +FG + +A
Sbjct: 159 NTYTFAAALQACEDSSFIKLGMQIHAAILKS--GRVLDVYVANALVAMYVRFGKMPEAAV 216
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCD---- 118
+F + +++V+W ++++G+ Q+G E F L P++ S+ S++++
Sbjct: 217 IFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGY 276
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAA 177
L+GK +HA A+K D+++ V N LI+MY+K C + F+ M +++ISW + A
Sbjct: 277 LLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAG 336
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ K QA+E L RQLQ EGM D +L AC GL
Sbjct: 337 YAQNKCYLQALE-------------LLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKE 383
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + G D V+ N +I Y CG I + ++F+ + D+VSW S++ Y +G
Sbjct: 384 IHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGL 442
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A +AL++FS+M ++PD T VS+LSA +++G ++ H + G + +
Sbjct: 443 ANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEI-HGFIIRKGFILEGSISN 501
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLE 412
+VD+ R G + +A K I + ++W+ ++ + H GE + K +++
Sbjct: 502 TLVDMYARCGSVEDAYK-IFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKII 560
Query: 413 PGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
P D + F+ + SG N+ + + MK
Sbjct: 561 P-DHITFLALLYACSHSGLVNEGKSFLEIMK 590
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 213/455 (46%), Gaps = 37/455 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L AC + ++ ++H I + +FV N L+ +YAK ++ AR LFD
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSF--VFVVNSLVALYAKCNDINGARKLFDR 118
Query: 68 MPKRN-VVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH---- 121
M RN VVSW ++IS Y+ +G E LF +L+ N ++ A+ L +C+
Sbjct: 119 MYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKL 178
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G +HA LK VYVANAL+ MY + EA +F N+E +++++WNSM+ F
Sbjct: 179 GMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ 238
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L ++A+E F ++N + + PD + ++ A L + +H+
Sbjct: 239 NGLYSEALEFFYDLQNAD-------------LKPDQVSIISIIVASGRLGYLLNGKEIHA 285
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K GF+ + ++ N LI YA+C +S + FD M + DL+SW + YA + +
Sbjct: 286 YAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQ 345
Query: 301 ALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+L + ++ D+ S+L AC + + ++ + P L + ++
Sbjct: 346 ALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TII 403
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH---GETRLAELAATKLKQLEPG 414
D+ G G I A ++ + + D V W+ ++ SC H L ++ K LEP
Sbjct: 404 DVYGECGIIDYAVRIFESIECK-DVVSWTSMI-SCYVHNGLANKALEVFSSMKETGLEP- 460
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
D + V + + C + K KE+ G +RK
Sbjct: 461 DYVTLVSILSAVCSLSTLKKG----KEIHGFIIRK 491
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 29/306 (9%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG---NAEECFR----LFCSLLQYF 103
MY K G + DA +FD+M +R++ +W A++ GY +G A E +R L S Y
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 104 FPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFE 161
FP L + I D G +H LA+K+ D+ V+V N+L+ +Y+K C D A K+F+
Sbjct: 61 FP--VLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAK-CNDINGARKLFD 117
Query: 162 NMEFRN-VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
M RN V+SWNS+I+A+ + EAL LF ++ + G+ + TF+
Sbjct: 118 RMYVRNDVVSWNSIISAYSGNGMCT-------------EALCLFSEMLKAGVVTNTYTFA 164
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
L+AC + +H+ I K G D +ANAL+ Y R G + + +F +
Sbjct: 165 AALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK 224
Query: 281 DLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+V+WNS+L + +G EAL+ F N +++PD + +S++ A G + G ++
Sbjct: 225 DIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIH 284
Query: 338 HSMLEN 343
++N
Sbjct: 285 AYAIKN 290
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/611 (36%), Positives = 333/611 (54%), Gaps = 48/611 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+++AT+ C+ ++ Q QLH + +P EP LF+ ++ + + F ++ A +
Sbjct: 26 RVHATVLQTCS---DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 82
Query: 65 FDEMPKRNVVSWTALISGYAQH-GNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL- 120
FD + + W LI A EE F L+ +L+ P++ + VL +C Y+
Sbjct: 83 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 142
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIA 176
GK VH +K VYV N LI++Y S C D A KVF+ M R+++SWNSMI
Sbjct: 143 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 202
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A + + AL LFR++QR PD T VL ACAGL + +
Sbjct: 203 AL-------------VRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGT 248
Query: 237 AVHSLIAKYGFED---DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
H+ + + D D ++ N+LI Y +CGS+ +++QVF M DL SWN+++ +A
Sbjct: 249 WAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFA 308
Query: 294 LHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
HG+A+EA+ F M NV+P+S TFV LL AC+H G V +G + F M+ ++ + P
Sbjct: 309 THGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEP 368
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET-RLAELAATK 407
L+HY C+VDL+ R G I EA ++ MPM+PD+VIW LL +C K G + L+E A
Sbjct: 369 ALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARN 428
Query: 408 L------KQLEPGDSLG-FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
+ + G+ G +V +S +Y + +N ++RK M +RK PG S IEI
Sbjct: 429 IIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEING 488
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA--LHDIEEEHKEEQLYHHS 518
HEF +G HPQ + I+++L+ + +L+ +GY+P+ S A + + KE L HS
Sbjct: 489 ISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHS 548
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
E+LA+ F ++N ++ IRI KN+R+C DCH KL S + EI+VRD RFHHF
Sbjct: 549 ERLAIAFGLIN----LPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHF 604
Query: 579 KDRICSCNDYW 589
KD CSC DYW
Sbjct: 605 KDGSCSCLDYW 615
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 330/573 (57%), Gaps = 31/573 (5%)
Query: 31 MINNFPNE---PQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG 87
MI+ F E + + N LINMY K G L++A +F M R+V+SW +I+ + QH
Sbjct: 324 MIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHS 383
Query: 88 NAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVAN 142
E L + L ++ S + L C G+++H+ ++ + A V + N
Sbjct: 384 QHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDN 443
Query: 143 ALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
A+++MY SC D+A +VF M+ R+ +SWN+MI A+ A + + EA
Sbjct: 444 AILDMYG-SCKSTDDASRVFRAMKARDQVSWNAMITAYAA------------QPRLSSEA 490
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LF+Q+Q G PD +F L ACA + +H I + G E + +ANA+++
Sbjct: 491 LLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNM 550
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATF 317
YA+ GS+ L++++F KM D++SWN ++ A+A HG A + L+ F MN + P+ TF
Sbjct: 551 YAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTF 610
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVV-PQLDHYACMVDLLGRVGRILEAEKLIREM 376
VS++SACSH GLV++G ++F S+L + + P+ +HY CMVDL+ R G++ AEK I
Sbjct: 611 VSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAA 670
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
P++PD VI S +LG+ + H + A +A L +L P S +V +SN+Y G ++
Sbjct: 671 PLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGA 730
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
IR+ M +RK P S I ++ RVHEF +G + + I ++LE L ++ GY P
Sbjct: 731 KIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTP 790
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFM 556
+T+L LHD+ +E K+ L +HSEKLA+ F +++ + +RI+KN+R+C DCH
Sbjct: 791 DTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAP----GTSLRIIKNLRVCGDCHTAT 846
Query: 557 KLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S + G+EIVVRDS+RFHHF + CSC DYW
Sbjct: 847 KFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 196/421 (46%), Gaps = 39/421 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-L 99
D +V+ L++MY K ++DAR +FD + + VV W A+I+ YAQ + E+ ++F + L
Sbjct: 134 DHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAML 193
Query: 100 LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVY---VANALINMYSKSC 152
L+ + VL +C L KLV L ++ H++ A AL+N Y SC
Sbjct: 194 LEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHDHLHDSSFATALVNFYG-SC 251
Query: 153 AD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D +A++ F + L I + + + +EAL LF+ + E
Sbjct: 252 GDLEQAFRAFSRHRLELI--------------LATAMITQYTQRERWDEALELFKVMLLE 297
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ D VL AC+G +H + + F+ NALI+ Y +CGS+ +
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEA 357
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+VF M + D++SWN+I+ A+ H Q EAL L M V+ D +FV+ L C+ +
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAAS 417
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
+ +G ++ HS + G+ + ++D+ G +A ++ R M D V W+
Sbjct: 418 EALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKAR-DQVSWNA 475
Query: 388 LLGSCRKHGETRLAELAATKLKQLE-----PGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
++ + + RL+ A +Q++ P D + FV + S + +L+ +
Sbjct: 476 MITA--YAAQPRLSSEALLLFQQMQLHGFMP-DVISFVAALSACAAQASLAEGKLLHDRI 532
Query: 443 K 443
+
Sbjct: 533 R 533
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 200/412 (48%), Gaps = 35/412 (8%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
F+ + L+ MY G L DA+ FD MP ++ ++W LI + Q G++E+ LF S+ L+
Sbjct: 34 FMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLE 93
Query: 102 YFFPNEFSLASVLISCD-----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
P + +VL +C G+ +H + ++++ YV+ L++MY K S ++
Sbjct: 94 GVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVED 153
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A KVF+ + + V+ WN+MI A +A+ + E+A+ +F + EG+ +
Sbjct: 154 ARKVFDGIRHKRVVEWNAMITA-------------YAQQDHHEQAIQVFYAMLLEGVKAE 200
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFE--DDTVIANALIHAYARCGSISLSKQV 273
TF VL AC+ L A V + + + D+ A AL++ Y CG + +Q
Sbjct: 201 RITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDL---EQA 257
Query: 274 FDKMTYH--DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
F + H +L+ +++ Y + EAL+LF M V+ D +++L+ACS
Sbjct: 258 FRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPR 317
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
++EG ++ H + ++ ++++ G+ G + EA ++ R M D + W+ +
Sbjct: 318 GLEEG-RMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSM-QHRDVISWNTI 375
Query: 389 LGSCRKHGETRLAELAATKLKQLE--PGDSLGFVQMSNIYCLSGSFNKARLI 438
+ + +H + A L L QL+ D + FV + S + K R+I
Sbjct: 376 IAAHGQHSQHPEA-LHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMI 426
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 24/212 (11%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
GK VHA K ++D ++ + L+ MY C +A F+ M ++ ++W +I A
Sbjct: 17 GKEVHARICKSAMDRGPFMGDLLVRMYV-DCGSLIDAKACFDRMPVQDALTWARLIRAH- 74
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG---LVTERHAS 236
++ + E+AL LFR +Q EG+AP F VL AC+ L+ E
Sbjct: 75 ------------GQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE--GR 120
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H ++ E D ++ L+H Y +C S+ +++VFD + + +V WN+++ AYA
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACS 325
++A+Q+F M V+ + TF+ +L ACS
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACS 212
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/578 (37%), Positives = 316/578 (54%), Gaps = 33/578 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
DL++ N L+ Y G L A LF + ++VVSW ++IS +AQ E+ LF +
Sbjct: 160 DLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKME 219
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ PN ++ VL +C D G+ V + + + + + NA+++MY+K D
Sbjct: 220 RENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVD 279
Query: 155 EAWKVFENMEFRNVISWNSMIAAF------RACKLEAQA------------IELFAKMKN 196
+A K+F+ M R+V SW M+ + A +L A I + +
Sbjct: 280 DAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGK 339
Query: 197 EEEALFLFRQLQREGMA-PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
+EAL +F +LQ +A PD T L ACA L +H I + G + + +
Sbjct: 340 PKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLIS 399
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQP 312
+L+ YA+CGS+ + +VF + D+ W++++ +HG+ K A+ LF M V+P
Sbjct: 400 SLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKP 459
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+S TF ++L ACSHAGLV EG FH M +GVVP++ HYACMVD+LGR G + EA +L
Sbjct: 460 NSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMEL 519
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
I EM P + +W LLG+C H L ELA+ +L +LEP + V +SNIY +G +
Sbjct: 520 INEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRW 579
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
K +RK M+ + ++K PG S IE VHEF G HP I+ KLEE+ +LK +
Sbjct: 580 EKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSV 639
Query: 493 GYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GY P S L IEE+ KE+ L HSEKLA+ F ++ IR++KN+RIC D
Sbjct: 640 GYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAP----SQPIRVVKNLRICGD 695
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH F KL S + ++I++RD RFHHF+D CSC DYW
Sbjct: 696 CHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 223/477 (46%), Gaps = 82/477 (17%)
Query: 22 KQAMQLHEHMINNF----PNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
KQ ++H M+ P LF + L + F LD AR+LFD++P+ N+ +W
Sbjct: 39 KQLKEVHARMLRTGLFFDPFSASKLFTASAL----SSFSTLDYARNLFDQIPQPNLYTWN 94
Query: 78 ALISGYAQHGNAEECFRLFCSLLQYF--FPNEFSLASVLISCDYLH----GKLVHALALK 131
LI YA + + F +F LL PN+F+ V+ + L G VH +A+K
Sbjct: 95 TLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIK 154
Query: 132 FSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
S +Y+ N+L+ Y +C D A ++F+ + ++V+SWNSMI+A
Sbjct: 155 LSFGMDLYILNSLVRFYG-ACGDLSMAERLFKGISCKDVVSWNSMISA------------ 201
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
FA+ E+AL LF +++RE + P+ T VL ACA + V S I + G +
Sbjct: 202 -FAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKV 260
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS------------------------- 284
D + NA++ Y +CGS+ ++++FD+M D+ S
Sbjct: 261 DLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMP 320
Query: 285 ------WNSILKAYALHGQAKEALQLFSNMNV----QPDSATFVSLLSACSHAGLVQEGN 334
WN ++ AY +G+ KEAL +F+ + + +PD T VS LSAC+ G + G
Sbjct: 321 VKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGG 380
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ H ++ G+V + +VD+ + G + +A ++ + E D +WS ++
Sbjct: 381 WI-HVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGM 438
Query: 395 HGETRLA-----ELAATKLKQLEPGDSLGFVQMSNIYCL---SGSFNKARLIRKEMK 443
HG + A E+ K+K P V +N+ C +G ++ R+ EM+
Sbjct: 439 HGRGKAAIDLFFEMQEAKVK---PNS----VTFTNVLCACSHAGLVDEGRVFFHEME 488
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 168/335 (50%), Gaps = 27/335 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALIN---MYSKSCADEAWKVFENMEFRNVISWNSMIAAFR 179
K VHA L+ L + A+ L + S S D A +F+ + N+ +WN++I A+
Sbjct: 42 KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYA 101
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ Q+ +F + ++ E L P+ TF V+KA + L R +AVH
Sbjct: 102 SSSDPFQSFVIFLDLLDKCEDL------------PNKFTFPFVIKAASELKASRVGTAVH 149
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K F D I N+L+ Y CG +S+++++F ++ D+VSWNS++ A+A +
Sbjct: 150 GMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPE 209
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL+LF M NV P+S T V +LSAC+ ++ G V S +E G+ L M
Sbjct: 210 DALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVC-SYIERKGIKVDLTLCNAM 268
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA--ATKLKQLEPG 414
+D+ + G + +A+KL EMP E D W+++L K G+ A L A +K++
Sbjct: 269 LDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAW 327
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+ L + Y +G +A I E++ S++ K
Sbjct: 328 NVL-----ISAYEQNGKPKEALAIFNELQLSKIAK 357
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 30/287 (10%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A +L + M +D+F +++ YAK G D AR +F+ MP + + +W
Sbjct: 276 GSVDDAQKLFDEM------PERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNV 329
Query: 79 LISGYAQHGNAEECFRLF--CSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKF 132
LIS Y Q+G +E +F L + P+E +L S L +C L G +H +
Sbjct: 330 LISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKRE 389
Query: 133 SLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
+ + ++ ++L++MY+K + ++A +VF ++E R+V W++MIA AI+LF
Sbjct: 390 GIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLF 449
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFED 249
+M Q + P+ TF+ VL AC AGLV E H + YG
Sbjct: 450 FEM-------------QEAKVKPNSVTFTNVLCACSHAGLVDEGRV-FFHEMEPVYGVVP 495
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALH 295
+ ++ R G + + ++ ++M+ S W ++L A +LH
Sbjct: 496 EMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLH 542
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 323/555 (58%), Gaps = 28/555 (5%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFF 104
N LINMY K G L++A +F M R+V+SW +I+ + QH E L + L
Sbjct: 342 NALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVK 401
Query: 105 PNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWK 158
++ S + L C G+++H+ ++ + A V + NA+++MY SC D+A +
Sbjct: 402 ADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYG-SCKSTDDASR 460
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
VF M+ R+ +SWN+MI A+ A + + EAL LF+Q+Q G PD +
Sbjct: 461 VFRAMKVRDQVSWNAMITAYAA------------QPRLSSEALLLFQQMQLHGFMPDVIS 508
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F L ACA + +H I + G E + +ANA+++ YA+ G++ L++++F KM
Sbjct: 509 FVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMP 568
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNK 335
D++SWN ++ A+A HG A + L+ F MN + P+ TFVS++SACSH GLV++G +
Sbjct: 569 LPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQ 628
Query: 336 VFHSMLENHGVV-PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+F S+L + + P+ +HY CMVDL+ R G++ AEK I P++PD VI S +LG+ +
Sbjct: 629 LFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKV 688
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H + A +A L +L P S +V +SN+Y G ++ IR+ M +RK P S
Sbjct: 689 HKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFS 748
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
I ++ RVHEF +G + + I ++LE L ++ GY P+T+L LHD+ +E K+ L
Sbjct: 749 SIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLL 808
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
+HSEKLA+ F +++ + +RI+KN+R+C DCH K S + G+EIVVRDS+R
Sbjct: 809 SYHSEKLAIAFGLISTAP----GTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHR 864
Query: 575 FHHFKDRICSCNDYW 589
FHHF + CSC DYW
Sbjct: 865 FHHFDNGTCSCGDYW 879
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 197/421 (46%), Gaps = 39/421 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-L 99
D +V+ L++MY K ++DAR +FD + + VV W A+I+ YAQ + E+ ++F + L
Sbjct: 134 DHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAML 193
Query: 100 LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVY---VANALINMYSKSC 152
L+ + VL +C L KLV L ++ H++ A AL+N Y SC
Sbjct: 194 LEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHDHLHDSSFATALVNFYG-SC 251
Query: 153 AD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D +A++ F + L I + + + +EAL LF+ + E
Sbjct: 252 GDLEQAFRAFSRHRLELI--------------LATAMITQYTQRERWDEALELFKVMLLE 297
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ D VL AC+G +H + + F+ NALI+ Y +CGS+ +
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEA 357
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+VF M + D++SWN+I+ A+ H Q EAL L M V+ D +FV+ L C+ +
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATS 417
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
+ +G ++ HS + G+ + ++D+ G +A ++ R M + D V W+
Sbjct: 418 EALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR-DQVSWNA 475
Query: 388 LLGSCRKHGETRLAELAATKLKQLE-----PGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
++ + + RL+ A +Q++ P D + FV + S + +L+ +
Sbjct: 476 MITA--YAAQPRLSSEALLLFQQMQLHGFMP-DVISFVAALSACAAQASLAEGKLLHDRI 532
Query: 443 K 443
+
Sbjct: 533 R 533
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 200/412 (48%), Gaps = 35/412 (8%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
F+ + L+ MY G L DA+ FD MP ++ ++W LI + Q G++E+ LF S+ L+
Sbjct: 34 FMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLE 93
Query: 102 YFFPNEFSLASVLISCD-----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
P + +VL +C G+ +H + ++++ YV+ L++MY K S ++
Sbjct: 94 GVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVED 153
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A KVF+ + + V+ WN+MI A +A+ + E+A+ +F + EG+ +
Sbjct: 154 ARKVFDGIRHKRVVEWNAMITA-------------YAQQDHHEQAIQVFYAMLLEGVKAE 200
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFE--DDTVIANALIHAYARCGSISLSKQV 273
TF VL AC+ L A V + + + D+ A AL++ Y CG + +Q
Sbjct: 201 RITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDL---EQA 257
Query: 274 FDKMTYH--DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
F + H +L+ +++ Y + EAL+LF M V+ D +++L+ACS
Sbjct: 258 FRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPR 317
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
++EG ++ H + ++ ++++ G+ G + EA ++ R M D + W+ +
Sbjct: 318 GLEEG-RIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSM-QHRDVISWNTI 375
Query: 389 LGSCRKHGETRLAELAATKLKQLE--PGDSLGFVQMSNIYCLSGSFNKARLI 438
+ + +H + A L L QL+ D + FV + S + K R+I
Sbjct: 376 IAAHGQHSQHPEA-LHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMI 426
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 24/212 (11%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
GK VHA K ++D ++ + L+ MY C +A F+ M ++ ++W +I A
Sbjct: 17 GKEVHARICKSAMDRGPFMGDLLVRMYV-DCGSLIDAKACFDRMPVQDALTWARLIRAH- 74
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG---LVTERHAS 236
++ + E+AL LFR +Q EG+AP F VL AC+ L+ E
Sbjct: 75 ------------GQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE--GR 120
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H ++ E D ++ L+H Y +C S+ +++VFD + + +V WN+++ AYA
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACS 325
++A+Q+F M V+ + TF+ +L ACS
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACS 212
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
++ V N ++NMYAK G L AR +F +MP +V+SW +IS +AQHG+A++ R F +
Sbjct: 540 NMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMN 599
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLV 125
+ PN+ + SV+ +C HG LV
Sbjct: 600 HEGKLPNDVTFVSVVSACS--HGGLV 623
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/533 (38%), Positives = 303/533 (56%), Gaps = 52/533 (9%)
Query: 105 PNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
P+ SL +VL +C +LHGK VH +A++ ++V NAL++MY+K DEA KV
Sbjct: 11 PDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKV 70
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE--------------------- 198
F+ ++ ++V+SWN+M+ + A+ LF KM+ E
Sbjct: 71 FDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLG 130
Query: 199 -EALFLFRQLQ----------------REGMA-PDWCTFSIVLKACAGLVTERHASAVHS 240
E L +FR++Q ++G+ P+ T S L ACA L R +H+
Sbjct: 131 CETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHA 190
Query: 241 LIAKYGFEDDTV-IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I + F+ + +AN LI YA+ G I +++ VFD + + VSW S++ Y +HG+ K
Sbjct: 191 YILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGK 250
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EAL++F M +QPD T + +L ACSH+G++ +G + F+SM + GV+P +HYACM
Sbjct: 251 EALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACM 310
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR GR+ EA +LI M MEP S++W LL CR H L E AA +L +L +
Sbjct: 311 VDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSEND 370
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+ +SNIY + + +R MK S +RK PG SW++ + F K HPQ +
Sbjct: 371 GSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSK 430
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I++ L L ++K +GYVPETS ALHD+++E K + L+ HSEKLAL + I+ +
Sbjct: 431 QIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGIL----ISAP 486
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R+C DCHN + S ++ EI++RDS+RFHHFK CSC+ YW
Sbjct: 487 GAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 157/362 (43%), Gaps = 102/362 (28%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--- 96
+DLFV N L++MYAK G +D+A +FD + +++VVSW A+++GY+Q G E+ LF
Sbjct: 46 EDLFVGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKM 105
Query: 97 -------------------------CSLLQYFF-------------------------PN 106
C L F PN
Sbjct: 106 REENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPN 165
Query: 107 EFSLASVLISCDYLH----GKLVHALALKFSLD-AHVYVANALINMYSKSC-ADEAWKVF 160
F+++ LI+C L G+ +HA L+ D A +YVAN LI+MY+KS D A VF
Sbjct: 166 CFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVF 225
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+N++ +N +SW S++ + +EAL +F +++R G+ PD T
Sbjct: 226 DNLKQKNFVSWTSLMTG-------------YGMHGRGKEALEVFDEMRRVGLQPDGVTLL 272
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+VL AC+ HS + G E S+SK+ F +
Sbjct: 273 VVLYACS-----------HSGMIDQGIEFFN----------------SMSKE-FGVIPGQ 304
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+ + ++ G+ EA++L M ++P S +V+LLS C V+ G +
Sbjct: 305 E--HYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQL 362
Query: 341 LE 342
LE
Sbjct: 363 LE 364
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
M PD + VL ACA + H AVH + + G +D + NAL+ YA+CG + +
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VFD++ D+VSWN+++ Y+ G+ ++AL LF M N++ + ++ ++++A + G
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 329 LVQEGNKVFHSMLENHG 345
L E VF M HG
Sbjct: 129 LGCETLDVFREM--QHG 143
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
ACA ++ Q+H +++ N + L+V N LI+MYAK G +D AR +FD + ++N
Sbjct: 175 ACARLAALRLGRQIHAYILRNHFDSAF-LYVANCLIDMYAKSGDIDVARFVFDNLKQKNF 233
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
VSWT+L++GY HG +E +F + + P+ +L VL +C +
Sbjct: 234 VSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSH 280
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/611 (35%), Positives = 327/611 (53%), Gaps = 36/611 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A A + +H H++ ++ V L+ YA G AR L E
Sbjct: 46 FPPLLKAVARGSSAAPVRAVHAHVVKF--GMGRNAHVATSLVTAYAAGGDGAAARALLSE 103
Query: 68 MPKRNVVSWTALISGYAQHGN-AEECFRLFCSLLQYFFPNEFSLASVLISC-----DYLH 121
+ V W ALISG+ + E C P + SVL +C D L
Sbjct: 104 RERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLL 163
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G VH + + + V NAL++MY++ CAD AWK+F+ M+ R+V+SW S+++
Sbjct: 164 GMQVHGRVVGSGVLPDLRVENALVDMYAE-CADMESAWKLFDGMQVRSVVSWTSLLSGLT 222
Query: 180 ACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSI 221
+A +LF +M + EAL +FR++Q ++ D T
Sbjct: 223 RLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVS 282
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
V+ ACA L V +++ G + D + NALI Y++CGSI + VF M + D
Sbjct: 283 VITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRD 342
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+W +I+ A++G +EA+++F M + PD TF+ +L+AC+HAGLV +G + F
Sbjct: 343 KFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFL 402
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
SM E + + P + HY C++DL GR G+I EA I +MPM P+S IW LL +CR HG +
Sbjct: 403 SMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNS 462
Query: 399 RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
+ EL +L Q++P +S + +SNIY + R +R + ++K PG S IE+
Sbjct: 463 EIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEM 522
Query: 459 ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHS 518
+HEF +G + HP + I+ KLE +I L +GY P+ + ++ EE K++ L+ HS
Sbjct: 523 NGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHS 582
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
EKLA+ FA+++ +VIRI+KN+R+C+DCHN +KL S L G+E+VVRD RFHHF
Sbjct: 583 EKLAIAFALLSS----EPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHF 638
Query: 579 KDRICSCNDYW 589
+ CSC DYW
Sbjct: 639 RHGFCSCKDYW 649
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
E+A+ + ++ G PD TF +LKA A + AVH+ + K+G + +A +L
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
+ AYA G + ++ + + V WN+++ + + EA F +M P
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 315 ATFVSLLSACSHA-GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T+VS+LSAC G V G +V H + GV+P L +VD+ + A KL
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQV-HGRVVGSGVLPDLRVENALVDMYAECADMESAWKLF 203
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATK--LKQLEPGDSLGFVQMSNIYCLSGS 431
M + V W+ LL G TRL + + ++ D++ + M + Y +
Sbjct: 204 DGMQVR-SVVSWTSLLS-----GLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAAR 257
Query: 432 FNKARLIRKEMKGSRV 447
F +A + +EM+ S V
Sbjct: 258 FREALEMFREMQCSNV 273
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/474 (40%), Positives = 280/474 (59%), Gaps = 26/474 (5%)
Query: 138 VYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAF------------------ 178
V++ N ++ Y S+S EA KVF+ M R+++SWN+MI +
Sbjct: 23 VFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTED 82
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
R + I +AK + +EAL L+R++ + PD T V+ AC+ L + V
Sbjct: 83 RDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEV 142
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + E D + ALI YA+CG I +++VFD+M D+ +W+S++ A HG
Sbjct: 143 HRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLG 202
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
E+L LFS M ++P+ TFV +L AC+H GLV EG K F SM E HG+ P ++HY C
Sbjct: 203 HESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGC 262
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDLLGR G + EA +LIR M EPD++IW LLG+CR H +AE A KL+ L+P
Sbjct: 263 MVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLG 322
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+V +SNIY + S+ +RK ++ +++ PG S IE + ++HEF SG + HP+
Sbjct: 323 DGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRS 382
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I++ LEE++ +LK GY P T L L DI+E+ KE L HSEKLA+ FA++ +
Sbjct: 383 KEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPA--- 439
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RS IRI KN+R C DCH+ MKL S + ++++VRD NRFHHF + CSC DYW
Sbjct: 440 -RSTIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 141/320 (44%), Gaps = 57/320 (17%)
Query: 33 NNFPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN--- 88
+ F P +D+F+ N ++ Y + +AR +FD MP R++VSW +I GYA G
Sbjct: 13 DAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGL 72
Query: 89 AEECFR--------LFCSLLQYF---------------------FPNEFSLASVLISCDY 119
A E F + S++ + P+ +L SV+ +C
Sbjct: 73 AREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSD 132
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
L G VH ++ + + ALI+MY+K C D A +VF+ M ++V +W+S
Sbjct: 133 LGALAVGAEVHRFVESNRIELDLKLGTALIDMYAK-CGDIESAQRVFDRMPEKDVQTWSS 191
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVT 231
MI L +++ LF+KM + EGM P+ TF VL AC GLV+
Sbjct: 192 MIIGLANHGLGHESLSLFSKMIS-------------EGMKPNGVTFVGVLIACTHVGLVS 238
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILK 290
E S+ +G E ++ R G + ++Q+ MT+ D + W ++L
Sbjct: 239 E-GKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLG 297
Query: 291 AYALHGQAKEALQLFSNMNV 310
A +H + A + + + V
Sbjct: 298 ACRIHKNVEIAEEAMAKLRV 317
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 40/201 (19%)
Query: 234 HASAVHSLIAKYGFED----DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+A A +A+ F++ D + N ++ AY ++ +++VFD M DLVSWN+++
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 290 KAYALHGQ-------------------------------AKEALQLFSNM---NVQPDSA 315
YA+ G+ +KEAL+L+ M ++ PD
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T VS++SACS G + G +V H +E++ + L ++D+ + G I A+++
Sbjct: 122 TLVSVVSACSDLGALAVGAEV-HRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDR 180
Query: 376 MPMEPDSVIWSVLLGSCRKHG 396
MP E D WS ++ HG
Sbjct: 181 MP-EKDVQTWSSMIIGLANHG 200
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ AC+ G + ++H + +N DL + LI+MYAK G ++ A+ +FD MP
Sbjct: 125 SVVSACSDLGALAVGAEVHRFVESN--RIELDLKLGTALIDMYAKCGDIESAQRVFDRMP 182
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL-----HGK 123
+++V +W+++I G A HG E LF ++ + PN + VLI+C ++ K
Sbjct: 183 EKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKK 242
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFR-NVISWNSMIAAFRAC 181
++ ++ V ++++ +S +EA ++ +M F + I W +++ A R
Sbjct: 243 YFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIH 302
Query: 182 KLEAQAIELFAKMK 195
K A E AK++
Sbjct: 303 KNVEIAEEAMAKLR 316
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 326/578 (56%), Gaps = 29/578 (5%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
GN+ LH + +E ++ +N L++MY+K G L+ A +F +M +VSWT+
Sbjct: 585 GNLSLGRALHGFGVKACFSE--EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTS 642
Query: 79 LISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFS 133
I+ Y + G + LF + + P+ +++ S++ +C G+ VH+ +K
Sbjct: 643 TIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG 702
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+ +++ V NALINMY+K +EA VF + ++++SWN+MI + L +A+ELF
Sbjct: 703 MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFL 762
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
M+ + PD T + VL ACAGL +H I + G+ D
Sbjct: 763 DMQKQ--------------FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLH 808
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+A AL+ YA+CG + L++ +FD + DL+SW ++ Y +HG EA+ F+ M
Sbjct: 809 VACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG 868
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
++PD ++F +L+ACSH+GL+ EG K F+SM GV P+L+HYAC+VDLL R+G + +A
Sbjct: 869 IEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKA 928
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
K I MP++PD+ IW VLL CR H + +LAE A + +LEP ++ +V ++N+Y +
Sbjct: 929 YKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEA 988
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
+ + + +RK M+ ++ PG SWIE+ + + F +G +HPQ + I L +L Q+
Sbjct: 989 EKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQM 1048
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRIC 549
+ Y L + ++ KE HSEK A+ F I+N L R+V R+ KN R+C
Sbjct: 1049 QNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILN---LPPGRTV-RVSKNQRVC 1104
Query: 550 VDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCND 587
DCH K S +EIV+RDSNRFHHFKD +CSC D
Sbjct: 1105 GDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 192/418 (45%), Gaps = 27/418 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ CA +++ ++H +I+N D + L+ MY G L R +FD+
Sbjct: 372 YCSVLQLCAEKKSLEDGKRVHSVIISN--GISIDEALGAKLVFMYVNCGDLVQGRKIFDK 429
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL--- 124
+ V W L+S YA+ GN E LF + + + ++ C GK+
Sbjct: 430 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 489
Query: 125 --VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
VH LK ++ V N+LI Y K + A +F+ + +V+SWNSMI
Sbjct: 490 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 549
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+E+F +M L L G+ D T VL A A + A+H
Sbjct: 550 GFSGNGLEIFIQM------LIL-------GVEVDLTTLVSVLVAWANIGNLSLGRALHGF 596
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K F ++ V +N L+ Y++CG+++ + +VF KM +VSW S + AY G +A
Sbjct: 597 GVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDA 656
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ LF M V+PD T S++ AC+ + + +G V HS + +G+ L +++
Sbjct: 657 IGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV-HSYVIKNGMGSNLPVTNALIN 715
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGD 415
+ + G + EA + ++P++ D V W+ ++G ++ A EL KQ +P D
Sbjct: 716 MYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDD 772
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
AIEL K K+ E L +C+ VL+ CA + VHS+I
Sbjct: 354 NAIELLTKSKSYELGL------------NSYCS---VLQLCAEKKSLEDGKRVHSVIISN 398
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
G D + L+ Y CG + +++FDK+ + WN ++ YA G +E++ LF
Sbjct: 399 GISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 458
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL---DHYACMVDL 359
M V + TF +L + G V+E +V HG V +L + A + L
Sbjct: 459 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV-------HGYVLKLGFGSNTAVVNSL 511
Query: 360 LG---RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + G + A L E+ EPD V W+ ++ C +G
Sbjct: 512 IAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 550
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 328/581 (56%), Gaps = 36/581 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFD--EMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N LI+ YA G+LD A +F+ E +++VSW ++++G+ Q G ++ LF
Sbjct: 274 DVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFER 333
Query: 99 LL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ + PN ++ SV+ +C + G+ V + + ++ V NA I+M+ K
Sbjct: 334 MRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGE 393
Query: 154 DE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE-------------- 198
E A +F+NME R+V+SW ++I + A ++F M ++
Sbjct: 394 VEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453
Query: 199 ----EALFLFRQLQ--REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
EAL +FR+LQ + G PD T L ACA L +H I K + +
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN--- 309
+A +LI Y++ G + + +VF + D+ W++++ A+HG+ + A++LF +M
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
V+P+S TF +LL ACSH+GLV EG ++F M +GVVP+ HY+CMVD+LGR G + EA
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEA 633
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
K I MP+ P + +W LLG+C HG LAE A ++L ++EPG+ +V +SN+Y +
Sbjct: 634 LKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKT 693
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
G + +R++M+ S ++K G S IEI+ VHEF G HP I+ KL+E++ +L
Sbjct: 694 GDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARL 753
Query: 490 KGMGYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
+ GYV T L +EEE KE+ L HSEK+A+ F ++ S + IRI+KN+R+
Sbjct: 754 RSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADS----QQAIRIVKNLRV 809
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH K+ S + G++IV+RD RFHHF CSC DYW
Sbjct: 810 CRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 217/486 (44%), Gaps = 78/486 (16%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINM--YAKFGYLDDARHLFDEM 68
LF C + KQ Q+H M+ N+ D + + L ++ F LD AR +FD++
Sbjct: 145 LFQQCT---SFKQLKQIHAQMLRT--NKLHDPYAASELFTAAAFSSFSALDYARKVFDQI 199
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCD----YLHG 122
P+ N+ SW LI A + + +F +L F PN+F+ ++ + +L G
Sbjct: 200 PQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVG 259
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRN--VISWNSMIAAF 178
K VH +A+K S V+V N+LI+ Y+ SC D A+ VFE +E N ++SWNSM+ F
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYA-SCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGF 318
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+A++LF +M+N EG+ P+ T V+ ACA + V
Sbjct: 319 VQGGYPDKALDLFERMRN-------------EGVHPNAVTMVSVMSACAKTMNLTLGRKV 365
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA----- 293
I + + + NA I + +CG + +++ +FD M D+VSW +I+ YA
Sbjct: 366 CDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEH 425
Query: 294 --------------------------LHGQAKEALQLFSNMNV-----QPDSATFVSLLS 322
G+ KEAL +F + + +PD T +S LS
Sbjct: 426 GIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLS 485
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC+ G + G + H ++ + + ++D+ + G + +A ++ + D
Sbjct: 486 ACAQLGAMDIGEWI-HGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDV 543
Query: 383 VIWSVLLGSCRKH--GETRLAELAATKLKQLEPGDSLGFVQMSNIYCL---SGSFNKARL 437
+WS ++ H GE + + Q++P V +N+ C SG ++ +
Sbjct: 544 FVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNS----VTFTNLLCACSHSGLVDEGKR 599
Query: 438 IRKEMK 443
+ EM+
Sbjct: 600 LFDEME 605
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 162/377 (42%), Gaps = 81/377 (21%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G ++ A L ++M E +D+ +I+ YAK AR +FD MP++++ +W
Sbjct: 392 GEVEIARGLFDNM------EKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNV 445
Query: 79 LISGYAQHGNAEECFRLFCSLL---QYFFPNEFSLASVLISCDYLH----GKLVHALALK 131
LISGY Q G +E +F L P++ +L S L +C L G+ +H K
Sbjct: 446 LISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKK 505
Query: 132 FSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+ + +A +LI+MYSKS ++A +VF ++ ++V W++MIA AIEL
Sbjct: 506 ERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIEL 565
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFE 248
F M Q + P+ TF+ +L AC +GLV E
Sbjct: 566 FLDM-------------QETQVKPNSVTFTNLLCACSHSGLVDE---------------- 596
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVS----WNSILKAYALHGQAKEALQ 303
K++FD+M + +V ++ ++ G +EAL+
Sbjct: 597 ---------------------GKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALK 635
Query: 304 LFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE----NHGVVPQLDHYACMVDL 359
M + P ++ + +LL AC G ++ K +LE NHG Y + +L
Sbjct: 636 FIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGA------YVLLSNL 689
Query: 360 LGRVGRILEAEKLIREM 376
+ G +L ++M
Sbjct: 690 YAKTGDWEGVSELRQQM 706
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/571 (35%), Positives = 318/571 (55%), Gaps = 38/571 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++ FV L++MY + R +FD M +R + W A+I+GY ++ E LF +
Sbjct: 321 ENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEM 380
Query: 100 L--QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ PN +L+SVL +C +L + +H+ +K+ + YV NAL++MYS+
Sbjct: 381 VFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGR 440
Query: 154 DE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK--NEEEALFLFRQLQRE 210
E A +F +M ++++SWN+MI + C A+ L M+ E + F +
Sbjct: 441 IEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDN 500
Query: 211 ---GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ P+ T VL CA L +H+ K D + +AL+ YA+CG +
Sbjct: 501 KNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCL 560
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF--------SNMNVQPDSATFVS 319
+LS+ VF++M+ ++++WN ++ AY +HG+ +EAL+LF +N ++P+ T+++
Sbjct: 561 NLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIA 620
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+ ++ SH+G+V EG +F++M HG+ P DHYAC+VDLLGR G+I EA LI+ MP
Sbjct: 621 IFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSN 680
Query: 380 PDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
V WS LLG+C+ H + E+AA L L+P N+ K ++
Sbjct: 681 MKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP----------NVLDYG---TKQSML 727
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
++MK VRK PG SWIE + VH+F +G HPQ + + + LE L ++K GYVP+T
Sbjct: 728 GRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDT 787
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
S LH++ EE KE L HSE+LA+ F ++N + IR+ KN+R+C DCH K
Sbjct: 788 SCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSP----GTTIRVAKNLRVCNDCHVATKF 843
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++ +EI++RD RFHHF++ CSC DYW
Sbjct: 844 ISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 189/409 (46%), Gaps = 41/409 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + A A ++ QLH H+ P V N L+NMY K G +D AR +FDE
Sbjct: 88 FPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTA--VPNSLVNMYGKCGDIDAARRVFDE 145
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCD-----YLH 121
+ R+ VSW ++I+ + E LF LL+ P F+L SV +C L
Sbjct: 146 ITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLL 205
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK VHA L+ + D + NAL+ MY+K EA +F+ + ++++SWN++I++
Sbjct: 206 GKQVHAFVLR-NGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISS--- 261
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
++ EEAL + + G+ P+ T + VL AC+ L +H+
Sbjct: 262 ----------LSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHA 311
Query: 241 LI-AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ +++ + AL+ Y C + VFD M + WN+++ Y +
Sbjct: 312 FVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDY 371
Query: 300 EALQLFSNM----NVQPDSATFVSLLSAC--SHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
EA++LF M + P+S T S+L AC + L +EG HS + G + D Y
Sbjct: 372 EAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEG---IHSCVVKWGF--EKDKY 426
Query: 354 A--CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS---CRKHGE 397
++D+ R+GRI A + M + D V W+ ++ C +H +
Sbjct: 427 VQNALMDMYSRMGRIEIARSIFGSMNRK-DIVSWNTMITGYVVCGRHDD 474
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 127/253 (50%), Gaps = 25/253 (9%)
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWK 158
P+ F+ +VL + D GK +HA KF V N+L+NMY K C D A +
Sbjct: 83 PDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGK-CGDIDAARR 141
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
VF+ + R+ +SWNSMI A AC+ E E A+ LFR + E + P T
Sbjct: 142 VFDEITNRDDVSWNSMINA--ACRFEEW-----------ELAVHLFRLMLLENVGPTSFT 188
Query: 219 FSIVLKACAGLVTE-RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
V AC+ L+ VH+ + + G + T NAL+ YA+ G + +K +FD
Sbjct: 189 LVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVF 247
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
DLVSWN+I+ + + + + +EAL M V+P+ T S+L ACSH ++ G
Sbjct: 248 DDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGK 307
Query: 335 KVFHSMLENHGVV 347
++ +L N+ ++
Sbjct: 308 EIHAFVLMNNDLI 320
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+A+ + + G+ PD F VLKA AG+ +H+ + K+G T + N+L+
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
+ Y +CG I +++VFD++T D VSWNS++ A + + A+ LF M NV P S
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 316 TFVSLLSACSH--AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T VS+ ACS+ GL+ K H+ + +G + A +V + ++GR+ EA+ L
Sbjct: 188 TLVSVAHACSNLINGLLL--GKQVHAFVLRNGDWRTFTNNA-LVTMYAKLGRVYEAKTLF 244
Query: 374 REMPMEPDSVIWSVLLGS 391
++ + D V W+ ++ S
Sbjct: 245 -DVFDDKDLVSWNTIISS 261
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/586 (36%), Positives = 326/586 (55%), Gaps = 33/586 (5%)
Query: 15 CALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF--GYLDDARHLFDEMPKRN 72
C G++K + HM+ N QD F+T+ LI A G++ A +F N
Sbjct: 17 CTRVGDLKA---IQAHMVR--ANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPN 71
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGKLVHA 127
+ W +I GY+ + L+ + L PN ++ VL +C L G+ +H+
Sbjct: 72 LFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHS 131
Query: 128 LALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
+K LD + N LI +Y+ C D A +F+ M + SW++M++ + Q
Sbjct: 132 QIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQ---NGQ 188
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
A+E AL LFR++Q E ++ D T + V+ C L VHS + K G
Sbjct: 189 AVE----------ALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEG 238
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
+ D V+ AL+ Y++CGS+ + +VF M D+ +W++++ YA+HG ++ALQLF
Sbjct: 239 VKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFD 298
Query: 307 NMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M P+ TF S+LSACSH+GLV++G+++F +M + + PQ+ HY CMVDL R
Sbjct: 299 AMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRA 358
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
G + A K I+ MP+EP+ V+W LLG+C+ HG L E + K+ +L+P +V +S
Sbjct: 359 GMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVS 418
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
N+Y G ++ +R MK +K G S IEI VH+F G + HP+RE I+ L
Sbjct: 419 NVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLH 478
Query: 484 ELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIM 543
++ +LK +G+V T LHDI+EE KE L HSE+LA+ + +++ + S IRI+
Sbjct: 479 QMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPN----GSPIRIV 534
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+R+C DCH +KL S++ +EI+VRD RFHHF++R CSCNDYW
Sbjct: 535 KNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/587 (37%), Positives = 327/587 (55%), Gaps = 39/587 (6%)
Query: 35 FPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F + P +D +I+ AK G LDDA L P RNV+SWT LISGY++ G A E
Sbjct: 163 FDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAV 222
Query: 94 RLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMY 148
F S+L P+E ++ +L +C D + G+ +H L + + + ALI+MY
Sbjct: 223 DCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMY 282
Query: 149 SKSCAD--EAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIE--LFAKMKNEE----- 198
+K C D AW+VF+ + R SWN+MI + CKL + LF +M++ +
Sbjct: 283 AK-CGDIGRAWEVFDALGRGRRPQSWNAMIDGY--CKLGHVDVARYLFDQMEDRDLVTFN 339
Query: 199 -------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
EAL LF Q++R + D T +L ACA L A+H+ I +
Sbjct: 340 SLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQR 399
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
E D + AL+ Y +CG + + VF M+ D+ +W++++ A +G K AL+ F
Sbjct: 400 LVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYF 459
Query: 306 SNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M V QP+S T++++L+ACSH+ L+ EG F M H + P ++HY CM+DLLGR
Sbjct: 460 FWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGR 519
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G + EA L+R MPM+P++VIW+ +L +CR H + LA AA L +LEP + +VQ+
Sbjct: 520 SGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQL 579
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKL 482
NIY S + A IR+ M+ V+K G S I + +VH+F + HPQ I +
Sbjct: 580 YNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMM 639
Query: 483 EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRI 542
EE+ +LK +GY P TS D++EE KE L HSEK+A+ F +++ + I
Sbjct: 640 EEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAP----NLPLHI 695
Query: 543 MKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+KN+R+C DCH+ +KL S + +EI+VRD +RFHHF+D CSCND+W
Sbjct: 696 IKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 123/313 (39%), Gaps = 57/313 (18%)
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG------L 229
A RAC F E L L+R+++R G+ D TF + K CA L
Sbjct: 72 TALRAC---------FRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLL 122
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD-------- 281
HA+ +++ +++N +IH Y G +++ FD + D
Sbjct: 123 CQMLHAACFRTMLPSAV----PLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVI 178
Query: 282 -----------------------LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
++SW ++ Y+ G+A EA+ F++M ++PD
Sbjct: 179 SGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEV 238
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
T + LLSAC+ + G + H ++ G++ ++D+ + G I A ++
Sbjct: 239 TVIGLLSACAQLKDLVFG-RSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDA 297
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
+ W+ ++ K G ++A Q+E D + F + Y G +A
Sbjct: 298 LGRGRRPQSWNAMIDGYCKLGHV---DVARYLFDQMEDRDLVTFNSLITGYIHGGRLREA 354
Query: 436 RLIRKEMKGSRVR 448
L+ +M+ +R
Sbjct: 355 LLLFMQMRRHDLR 367
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/568 (35%), Positives = 320/568 (56%), Gaps = 45/568 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN------AEECF 93
D+F+ + +I+MYAK G L +A LF + + NVV + +I+G+ + A E
Sbjct: 245 SDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEAL 304
Query: 94 RLFCSLLQYFF-PNEFSLASVLISCD---YLH-GKLVHALALKFSLDAHVYVANALINMY 148
L+ + P EF+ +SVL +C+ YL GK +H +K++ ++ +ALI++Y
Sbjct: 305 TLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLY 364
Query: 149 SKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFR 205
S C ++ ++ F + ++++W +M++ ++NE E+AL LF
Sbjct: 365 FNSGCMEDGFRCFRSSPKHDIVTWTAMVSGC---------------VQNELHEKALSLFH 409
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ G+ PD T S V+ ACA L R + K GF+ TV+ N+ +H YAR G
Sbjct: 410 ESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSG 469
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+ + + F +M HD+VSW++++ +A HG A++AL F M V P+ TF+ +L+
Sbjct: 470 DVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLT 529
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACSH GLV EG + + +M +++G+ P + H C+VDLLGR GR+ +AE I D
Sbjct: 530 ACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADP 589
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
VIW LL SCR H + +L A ++ +LEP S +V + N+Y +G + A R M
Sbjct: 590 VIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLM 649
Query: 443 KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL 502
K V+K PGLSWIE++ VH F +G K HP+ AI+ KLEE++ +++ LA
Sbjct: 650 KQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIE--------KLAT 701
Query: 503 HDIEEEHKEEQLYH-HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
D E +E+ L + HSEKLA+ +++ + + IR+MKN+R+C DCH+ MKL S
Sbjct: 702 TDTEISKREQNLMNCHSEKLAVALGMIH----LPQSAPIRVMKNLRVCRDCHSTMKLISK 757
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+EI++RD RFHHF+D CSC DYW
Sbjct: 758 SENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 200/409 (48%), Gaps = 30/409 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA AC+ G+++ +H I +FV+N L++MY+K G + +AR +FD
Sbjct: 112 YAAALAACSRAGHLRAGRAVHALAI--LDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDV 169
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----- 121
+R+ VSW +L+SGY + G EE R+F + + N F+L SV+ C
Sbjct: 170 AEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMD 229
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
+ VH +K LD+ V++ +A+I+MY+K A EA +F +++ NV+ +N+MIA F
Sbjct: 230 IAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGF- 288
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C+ E + A EAL L+ ++Q GM P TFS VL+AC +H
Sbjct: 289 -CRTETVIGKEVAS-----EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ KY F++D I +ALI Y G + + F HD+V+W +++ + +
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402
Query: 300 EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL LF ++PD T S+++AC+ + + G ++ + D + M
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI-----QCFATKSGFDRFTVM 457
Query: 357 ----VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V + R G + A + +EM D V WS ++ +HG R A
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESH-DVVSWSAVISCHAQHGCARDA 505
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 187/371 (50%), Gaps = 38/371 (10%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
LF+ N L+ Y + G AR L DEMP+RN VS+ LI Y++ G A +
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 102 YFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD-- 154
+ FS A+ L +C G+ VHALA+ L + V+V+N+L++MYSK C +
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSK-CGEMG 161
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA +VF+ E R+ +SWNS+++ + + EE + +F ++R GM
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSG-------------YVRAGAREEMVRVFAMMRRGGMGL 208
Query: 215 DWCTFSIVLKACAGL--VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ V+K C+G T A AVH + K G + D + +A+I YA+ G++ +
Sbjct: 209 NSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAA 268
Query: 273 VFDKMTYHDLVSWNSILKAY----ALHGQ--AKEALQLFSNM---NVQPDSATFVSLLSA 323
+F + ++V +N+++ + + G+ A EAL L+S + +QP TF S+L A
Sbjct: 269 LFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRA 328
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPD 381
C+ AG ++ G ++ +++ Q D + + ++DL G + + + R P + D
Sbjct: 329 CNLAGYLEFGKQIHGQVIK---YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHD 384
Query: 382 SVIWSVLLGSC 392
V W+ ++ C
Sbjct: 385 IVTWTAMVSGC 395
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 136 AHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
A +++ N L+ Y + A ++ + M RN +S+N +I A+ L ++E A+
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
+ R G+ D +++ L AC+ R AVH+L G ++
Sbjct: 101 R-------------RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVS 147
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
N+L+ Y++CG + +++VFD D VSWNS++ Y G +E +++F+ M +
Sbjct: 148 NSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMG 207
Query: 312 PDSATFVSLLSACSHAG-LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+S S++ CS G + + H + G+ + + M+D+ + G ++EA
Sbjct: 208 LNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAA 267
Query: 371 KLIREMPMEPDSVIWSVLL-GSCR 393
L R + EP+ V+++ ++ G CR
Sbjct: 268 ALFRSV-QEPNVVMFNTMIAGFCR 290
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/633 (34%), Positives = 337/633 (53%), Gaps = 71/633 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA G + Q+H + + + E D+FV N +++MYAK G +++A +F+ M
Sbjct: 237 VLPACASVGAWSRGKQVHGYALRSGLFE--DVFVGNAVVDMYAKCGMMEEANKVFERMKV 294
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL----------------------------LQY 102
++VVSW A+++GY+Q G ++ LF + L
Sbjct: 295 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 354
Query: 103 FF--------PNEFSLASVLISC----DYLHGKLVHALALKFSLD-------AHVYVANA 143
F PN +L S+L C LHGK H A+K+ L+ + V NA
Sbjct: 355 FRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 414
Query: 144 LINMYSKSCADEAWKVFENM---EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
LI+MYSK + +A + ++ + R+V++W +I +A+ELF++M +
Sbjct: 415 LIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNF 474
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIH 259
+ P+ T S L ACA L R +H+ + + FE + +AN LI
Sbjct: 475 VM-----------PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 523
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
Y++ G + ++ VFD M + VSW S++ Y +HG+ +EALQ+F M + PD T
Sbjct: 524 MYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVT 583
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
FV +L ACSH+G+V +G F+ M ++ GVVP +HYACMVDLL R GR+ EA +LIR M
Sbjct: 584 FVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 643
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
PM+P +W LL +CR + L E AA +L +LE G+ + +SNIY + +
Sbjct: 644 PMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVA 703
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
IR MK + ++K PG SW++ F +G HP + I+ L +L+ ++K +GYVP
Sbjct: 704 RIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVP 763
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFM 556
+ ALHD+++E K + L HSEKLAL + I+ + IRI KN+R C DCH+
Sbjct: 764 DNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTA----PGAPIRITKNLRACGDCHSAF 819
Query: 557 KLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++ EI+VRDS+RFHHFK+ CSC YW
Sbjct: 820 TYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 168/350 (48%), Gaps = 61/350 (17%)
Query: 10 TLFHACALHGNIKQAMQLHEHMI----NNFPNEP-QDLFVTNHLINMYAKFGYLDDARHL 64
+L CAL G + + H H I N N+P DL V N LI+MY+K AR +
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431
Query: 65 FDEMPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQ---YFFPNEFSLASVLISCDY 119
FD +P R+VV+WT LI G AQHG A E LF +LQ + PN F+++ L++C
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491
Query: 120 L----HGKLVHALALKFSLD-AHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNS 173
L G+ +HA L+ + A ++VAN LI+MYSKS D A VF+NM RN +SW S
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
++ + EEAL +F ++Q+ G+ PD TF +VL AC+
Sbjct: 552 LMTG-------------YGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACS------ 592
Query: 234 HASAVHSLIAKY-GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
H+ V I + G D + H YA C LS+
Sbjct: 593 HSGMVDQGINYFNGMNKDFGVVPGAEH-YA-CMVDLLSRA-------------------- 630
Query: 293 ALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
G+ EA++L M ++P A +V+LLSAC V+ G + +LE
Sbjct: 631 ---GRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLE 677
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 202/455 (44%), Gaps = 78/455 (17%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHM-INNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
+T + +TLFH C ++ A +H+ + + P++P H+I+MY F A
Sbjct: 28 TTDLTSTLFHQCK---SLASAELIHQQLLVQGLPHDP------THIISMYLTFNSPAKAL 78
Query: 63 HLFDEM--PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
+ + V W LI G E+ +L+ + + + P+ ++ VL +C
Sbjct: 79 SVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGE 138
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV---ISW 171
+ G VHA+ + +V+V N L++MY + A + A +VF+ M R V +SW
Sbjct: 139 IPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSW 198
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
NS++AA+ +A+++F +M + G+ PD + VL ACA +
Sbjct: 199 NSIVAAYMQGGDSIRAMKMFERMTEDL------------GIRPDAVSLVNVLPACASVGA 246
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
VH + G +D + NA++ YA+CG + + +VF++M D+VSWN+++
Sbjct: 247 WSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTG 306
Query: 292 YALHGQAKEALQLFSN-------MNV-------------------------------QPD 313
Y+ G+ +AL LF +NV +P+
Sbjct: 307 YSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPN 366
Query: 314 SATFVSLLSACSHAGLVQEGNKVF-HSM-----LENHGVVPQLDHYACMVDLLGRVGRIL 367
T VSLLS C+ AG + G + H++ L+ + L ++D+ +
Sbjct: 367 VVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPK 426
Query: 368 EAEKLIREMPMEPDSVI-WSVLLGSCRKHGETRLA 401
A + +P + SV+ W+VL+G +HGE A
Sbjct: 427 AARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEA 461
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/531 (39%), Positives = 300/531 (56%), Gaps = 59/531 (11%)
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLH 121
E K W + + A+ + + LF L QY P+ F+ +SVL +C D +
Sbjct: 120 EKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSN 179
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
G+++H V E + FR SW SMIA + C
Sbjct: 180 GRILHG-------------------------------VVEKVGFR---SWTSMIAGYVQC 205
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+AI LFAKM EEA G+ + T VL ACA L +H
Sbjct: 206 GKAKEAIHLFAKM---EEA----------GVKCNEVTVVAVLAACADLGALDLGMRIHEY 252
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
++GF+ + I+N LI Y +CG + + +VF++M +VSW++++ A+HG+A+EA
Sbjct: 253 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 312
Query: 302 LQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+LFS+M+ ++P+ TF+ LL ACSH GL+ EG + F SM ++G++PQ++HY CMVD
Sbjct: 313 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 372
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LL R G + EA + I MPM+P+ V+W LLG+CR H +AE A L +L+P +
Sbjct: 373 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 432
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SNIY +G + +RK MK +V+K PG S I ++ VHEF +G + HP E I
Sbjct: 433 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQI 492
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
F++ EEL+ +++ GYVP TS+ L DIEE K + + HSEKLALVF +MN + +
Sbjct: 493 FQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPA----ET 548
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRIMKN+RIC DCH+ KL S ++ +EIVVRD NRFH F D CSC DYW
Sbjct: 549 PIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 27/308 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D F + ++ L + R L + K SWT++I+GY Q G A+E LF +
Sbjct: 160 DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKME 219
Query: 101 QYFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ NE ++ +VL +C L G +H + + +V ++N LI+MY K C +
Sbjct: 220 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 279
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA KVFE ME R V+SW++MI A EEAL LF + + G+ P
Sbjct: 280 EACKVFEEMEERTVVSWSAMIGG-------------LAMHGRAEEALRLFSDMSQVGIEP 326
Query: 215 DWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ TF +L AC+ GL++E S+ YG ++ +R G + + +
Sbjct: 327 NGVTFIGLLHACSHMGLISEGR-RFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 385
Query: 273 VFDKMTYH-DLVSWNSILKAYALHGQ---AKEALQLFSNMNVQPDSATFVSLLSACSHAG 328
M + V W ++L A +H A+EA++ ++ D +V L + + AG
Sbjct: 386 FILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLND-GYYVVLSNIYAEAG 444
Query: 329 LVQEGNKV 336
++ +V
Sbjct: 445 RWEDTARV 452
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
ACA G + M++HE+ +N +++ ++N LI+MY K G L++A +F+EM +R V
Sbjct: 236 ACADLGALDLGMRIHEY--SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTV 293
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL-----HGKLVHA 127
VSW+A+I G A HG AEE RLF + Q PN + +L +C ++ + +
Sbjct: 294 VSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFAS 353
Query: 128 LALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFRACK 182
+ + + + ++++ S++ EA + NM + N + W +++ A R K
Sbjct: 354 MTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHK 410
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/589 (35%), Positives = 330/589 (56%), Gaps = 30/589 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
L A GN+ + ++H + I N + ++ + N L++MYAK + H F+ M +
Sbjct: 355 LIAASGRSGNLLKGKEVHAYAIRNGLD--SNMQIGNTLVDMYAKCCCVKYMGHAFECMHE 412
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGK----LV 125
++++SWT +I+GYAQ+ E LF + ++ + + SVL +C L + +
Sbjct: 413 KDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREI 472
Query: 126 HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H K L A + + NA++N+Y + D A + FE++ ++++SW SMI L
Sbjct: 473 HGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLP 531
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+A+ELF +K + + PD L A A L + + +H + +
Sbjct: 532 VEALELFYSLK-------------QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GF + IA++L+ YA CG++ S+++F + DL+ W S++ A +HG +A+ L
Sbjct: 579 KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIAL 638
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M NV PD TF++LL ACSH+GL+ EG + F M + + P +HYACMVDLL
Sbjct: 639 FKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLS 698
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R + EA +R MP++P S IW LLG+C H L ELAA +L Q + +S +
Sbjct: 699 RSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYAL 758
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNI+ G +N +R MKG+ ++K PG SWIE++N++H F + K HPQ + I+ K
Sbjct: 759 ISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLK 818
Query: 482 LEELIGQL-KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
L + L K GY+ +T H++ EE K + LY HSE+LAL + ++ + + + I
Sbjct: 819 LAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLL----VTPKGTCI 874
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RI KN+RIC DCH F K+AS++ + +VVRD+NRFHHF+ +CSC D+W
Sbjct: 875 RITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 174/367 (47%), Gaps = 31/367 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++ L C + Q QLH ++ + + F+ L+ MY K G L DA +FDE
Sbjct: 49 HSLLLDLCVAAKALPQGQQLHALLLKSHLSA----FLATKLVLMYGKCGSLRDAVKVFDE 104
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH----G 122
M +R + SW AL+ + G E L+ + + + + SVL +C L G
Sbjct: 105 MSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFEN--MEFRNVISWNSMIAAF 178
+H +A+K V+V NALI MY K C D A +F+ ME + +SWNS+I+A
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGK-CGDLGGARVLFDGIMMEKEDTVSWNSIISAH 223
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A E +E AL LFR++Q G+A + TF L+ + +
Sbjct: 224 VA---EGNCLE----------ALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + K D +ANALI YA+CG + + +VF+ M D VSWN++L +
Sbjct: 271 HGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELY 330
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+AL F +M +PD + ++L++A +G + +G +V H+ +G+ +
Sbjct: 331 SDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEV-HAYAIRNGLDSNMQIGNT 389
Query: 356 MVDLLGR 362
+VD+ +
Sbjct: 390 LVDMYAK 396
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 333/576 (57%), Gaps = 31/576 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ ++Y ACA N+ A ++H H+ ++ D F+ N LI++Y K G + +A
Sbjct: 50 TPRVYHAFITACAQSKNLDDARKIHAHLASS--RFAGDAFLDNSLIHLYCKCGSVVEAHK 107
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLIS----CD 118
+FD+M +++VSWT+LI+GYAQ+ E L +L+ F PN F+ AS+L + D
Sbjct: 108 VFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYAD 167
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G +HALA+K VYV +AL++MY++ C D A VF+ ++ +N +SWN++I+
Sbjct: 168 SGIGGQIHALAVKCDWHEDVYVGSALLDMYAR-CGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F A+ + E AL +F ++QR G T+S + A AG+
Sbjct: 227 GF-------------ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGK 273
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH+ + K + + N ++ YA+ GS+ +++VF+++ DLV+WNS+L A+A +G
Sbjct: 274 WVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
KEA+ F M + + +F+ +L+ACSH GLV+EG F M++ + + P+++HY
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYF-DMIKEYNLEPEIEHY 392
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+VDLLGR G + A I +MPMEP + +W LL +CR H ++ + AA + QL+P
Sbjct: 393 VTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP 452
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
DS V + NIY +G ++ A +RK MK + V+K P SW+EIEN VH F + HP
Sbjct: 453 DDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHP 512
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ E I+K +E+ +++ GYVP+ L ++E+ +E L +HSEK+AL FA++ +
Sbjct: 513 RAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPA- 571
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
+ IRIMKNIRIC DCH+ K S + +EIV+
Sbjct: 572 ---GATIRIMKNIRICGDCHSAFKYISKVFEREIVI 604
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+AP + + ACA A +H+ +A F D + N+LIH Y +CGS+ +
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VFDKM D+VSW S++ YA + EA+ L M +P+ TF SLL A
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHY------ACMVDLLGRVGRILEAEKLIREMPMEPDS 382
G ++ H + + D + + ++D+ R G++ A + ++ + +
Sbjct: 167 DSGIGGQI-------HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NG 218
Query: 383 VIWSVLL-GSCRK-HGETRLAELAATKLKQLE 412
V W+ L+ G RK GET L A + E
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRNGFE 250
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 316/560 (56%), Gaps = 58/560 (10%)
Query: 35 FPNEPQDLFVT-NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F P+ +T ++ YAK L+ AR FD MP+R+VVSW A++SGYAQ+G AEE
Sbjct: 97 FDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEAL 156
Query: 94 RLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
RLF +L + + NA+I+ Y +
Sbjct: 157 RLFDEMLGAY--------------------------------RNSVTWNAMISAYMRVGD 184
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A K+F M RNV++WNSMIA + A AIELF +M + + +
Sbjct: 185 LDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEM------------ITAKKL 232
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD T V+ AC L + V + + + NA+I Y+RCGS+ +K+
Sbjct: 233 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 292
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VF +M D+VS+N+++ +A HG EA+ L S M ++PD TF+ +L+ACSHAGL
Sbjct: 293 VFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 352
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++EG KVF S+ + P +DHYACMVDLLGRVG + +A++ + MPMEP + ++ LL
Sbjct: 353 LEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 407
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+ R H + L ELAA KL +LEP +S F+ +SNIY +G + IR+ MK V+K
Sbjct: 408 NASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKK 467
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SW+E ++H+F + H + + I++ L EL +++ GY+ + S L D+EEE
Sbjct: 468 TTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEE 527
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KEE + HSEKLA+ +A++ + +VIR++KN+R+C DCH +K+ S L G+ I+V
Sbjct: 528 KEEIVGTHSEKLAICYALL----VSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIV 583
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFH F D +CSC DYW
Sbjct: 584 RDNNRFHCFNDGLCSCKDYW 603
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 184/394 (46%), Gaps = 51/394 (12%)
Query: 105 PNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD------EAWK 158
P+ F + +LI G HA LK + +V NA+I+MY++ AD WK
Sbjct: 28 PDAF-VYPILIKSAGTGGIGFHAHVLKLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWK 86
Query: 159 ---------VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+F+ M RNVI+W +M+ +AK+K+ E A F +
Sbjct: 87 WESEGQAQWLFDVMPERNVITWTAMVTG-------------YAKVKDLEAARRYFDCMPE 133
Query: 210 EGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ +++ +L A GL E A+ G ++V NA+I AY R G +
Sbjct: 134 RSVV----SWNAMLSGYAQNGLAEE----ALRLFDEMLGAYRNSVTWNAMISAYMRVGDL 185
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSA 323
++++F+ M ++V+WNS++ YA +GQ+ A++LF M + PD T VS++SA
Sbjct: 186 DSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISA 245
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C H G ++ GN V + EN + + + M+ + R G + +A+++ +EM D V
Sbjct: 246 CGHLGALELGNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVV 303
Query: 384 IWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
++ L+ + HG + ++ K +EP D + F+ + +G + R + +
Sbjct: 304 SYNTLISGFAAHGHGVEAINLMSTMKEGGIEP-DRVTFIGVLTACSHAGLLEEGRKVFES 362
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+K + Y + +++ RV E KR +R
Sbjct: 363 IKDPAIDHYACM--VDLLGRVGELED-AKRTMER 393
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 126/317 (39%), Gaps = 61/317 (19%)
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+ ++ +++ + + ++ Q+Q G+ PD + I++K+ H+ + K G
Sbjct: 2 LRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGH 56
Query: 248 EDDTVIANALIHAYAR-------------------------------------------- 263
D + NA+I YAR
Sbjct: 57 GSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYA 116
Query: 264 -CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLL 321
+ +++ FD M +VSWN++L YA +G A+EAL+LF M +S T+ +++
Sbjct: 117 KVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMI 176
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM----P 377
SA G + K+F++M + V + M+ + G+ A +L +EM
Sbjct: 177 SAYMRVGDLDSARKLFNTMPGRNVVT-----WNSMIAGYAQNGQSAMAIELFKEMITAKK 231
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL-GFVQMSNIYCLSGSFNKAR 436
+ PD V ++ +C G L L + + S+ G M +Y GS A+
Sbjct: 232 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 291
Query: 437 LIRKEMKGSRVRKYPGL 453
+ +EM V Y L
Sbjct: 292 RVFQEMATRDVVSYNTL 308
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/633 (34%), Positives = 337/633 (53%), Gaps = 71/633 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA G + Q+H + + + E D+FV N +++MYAK G +++A +F+ M
Sbjct: 256 VLPACASVGAWSRGKQVHGYALRSGLFE--DVFVGNAVVDMYAKCGMMEEANKVFERMKV 313
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL----------------------------LQY 102
++VVSW A+++GY+Q G ++ LF + L
Sbjct: 314 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 373
Query: 103 FF--------PNEFSLASVLISC----DYLHGKLVHALALKFSLD-------AHVYVANA 143
F PN +L S+L C LHGK H A+K+ L+ + V NA
Sbjct: 374 FRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 433
Query: 144 LINMYSKSCADEAWKVFENM---EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
LI+MYSK + +A + ++ + R+V++W +I +A+ELF++M +
Sbjct: 434 LIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNF 493
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIH 259
+ P+ T S L ACA L R +H+ + + FE + +AN LI
Sbjct: 494 VM-----------PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 542
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSAT 316
Y++ G + ++ VFD M + VSW S++ Y +HG+ +EALQ+F M + PD T
Sbjct: 543 MYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVT 602
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
FV +L ACSH+G+V +G F+ M ++ GVVP +HYACMVDLL R GR+ EA +LIR M
Sbjct: 603 FVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 662
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
PM+P +W LL +CR + L E AA +L +LE G+ + +SNIY + +
Sbjct: 663 PMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVA 722
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
IR MK + ++K PG SW++ F +G HP + I+ L +L+ ++K +GYVP
Sbjct: 723 RIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVP 782
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFM 556
+ ALHD+++E K + L HSEKLAL + I+ + IRI KN+R C DCH+
Sbjct: 783 DNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTA----PGAPIRITKNLRACGDCHSAF 838
Query: 557 KLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++ EI+VRDS+RFHHFK+ CSC YW
Sbjct: 839 TYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 200/451 (44%), Gaps = 78/451 (17%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHM-INNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
+T + +TLFH C ++ A H+ + + P++P H+I+MY F A
Sbjct: 47 TTDLTSTLFHQCK---SLASAELTHQQLLVQGLPHDP------THIISMYLTFNSPAKAL 97
Query: 63 HLFDEM--PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
+ + V W LI G E+ +L+ + + + P+ ++ VL +C
Sbjct: 98 SVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGE 157
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV---ISW 171
+ G VHA+ + +V+V N L++MY + A + A +VF+ M R V +SW
Sbjct: 158 IPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSW 217
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
NS++AA+ +A+++F +M + G+ PD + VL ACA +
Sbjct: 218 NSIVAAYMQGGDSIRAMKMFERMTEDL------------GIRPDAVSLVNVLPACASVGA 265
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
VH + G +D + NA++ YA+CG + + +VF++M D+VSWN+++
Sbjct: 266 WSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTG 325
Query: 292 YALHGQAKEALQLFSN-------MNV-------------------------------QPD 313
Y+ G+ +AL LF +NV +P+
Sbjct: 326 YSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPN 385
Query: 314 SATFVSLLSACSHAGLVQEGNKVF-HSM-----LENHGVVPQLDHYACMVDLLGRVGRIL 367
T VSLLS C+ AG + G + H++ L+ + L ++D+ +
Sbjct: 386 VVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPK 445
Query: 368 EAEKLIREMPMEPDSVI-WSVLLGSCRKHGE 397
A + +P + SV+ W+VL+G +HGE
Sbjct: 446 AARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 476
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/568 (35%), Positives = 320/568 (56%), Gaps = 45/568 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN------AEECF 93
D+F+ + +I+MYAK G L +A LF + + NVV + +I+G+ + A E
Sbjct: 245 SDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEAL 304
Query: 94 RLFCSLLQYFF-PNEFSLASVLISCD---YLH-GKLVHALALKFSLDAHVYVANALINMY 148
L+ + P EF+ +SVL +C+ YL GK +H +K++ ++ +ALI++Y
Sbjct: 305 TLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLY 364
Query: 149 SKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFR 205
S C ++ ++ F + ++++W +M++ ++NE E+AL LF
Sbjct: 365 FNSGCMEDGFRCFRSSPKHDIVTWTAMVSGC---------------VQNELHEKALSLFH 409
Query: 206 QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ G+ PD T S V+ ACA L R + K GF+ TV+ N+ +H YAR G
Sbjct: 410 ESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSG 469
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
+ + + F +M HD+VSW++++ +A HG A++AL F M V P+ TF+ +L+
Sbjct: 470 DVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLT 529
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACSH GLV EG + + +M +++G+ P + H C+VDLLGR GR+ +AE I D
Sbjct: 530 ACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADP 589
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
VIW LL SCR H + +L A ++ +LEP S +V + N+Y +G + A R M
Sbjct: 590 VIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLM 649
Query: 443 KGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLAL 502
K V+K PGLSWIE++ VH F +G K HP+ AI+ KLEE++ +++ LA
Sbjct: 650 KQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIE--------KLAT 701
Query: 503 HDIEEEHKEEQLYH-HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
D E +E+ L + HSEKLA+ +++ + + IR+MKN+R+C DCH+ MKL S
Sbjct: 702 TDTEISKREQNLMNCHSEKLAVALGMIH----LPQSAPIRVMKNLRVCRDCHSTMKLISK 757
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+EI++RD RFHHF+D CSC DYW
Sbjct: 758 SENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 200/409 (48%), Gaps = 30/409 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA AC+ G+++ +H I +FV+N L++MY+K G + +AR +FD
Sbjct: 112 YAAALAACSRAGHLRAGRAVHALAI--LDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDV 169
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----- 121
+R+ VSW +L+SGY + G EE R+F + + N F+L SV+ C
Sbjct: 170 AEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMD 229
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
+ VH +K LD+ V++ +A+I+MY+K A EA +F +++ NV+ +N+MIA F
Sbjct: 230 IAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGF- 288
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C+ E + A EAL L+ ++Q GM P TFS VL+AC +H
Sbjct: 289 -CRTETVIGKEVAS-----EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ KY F++D I +ALI Y G + + F HD+V+W +++ + +
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402
Query: 300 EALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL LF ++PD T S+++AC+ + + G ++ + D + M
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI-----QCFATKSGFDRFTVM 457
Query: 357 ----VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V + R G + A + +EM D V WS ++ +HG R A
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESH-DVVSWSAVISCHAQHGCARDA 505
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 187/371 (50%), Gaps = 38/371 (10%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
LF+ N L+ Y + G AR L DEMP+RN VS+ LI Y++ G A +
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 102 YFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD-- 154
+ FS A+ L +C G+ VHALA+ L + V+V+N+L++MYSK C +
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSK-CGEMG 161
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA +VF+ E R+ +SWNS+++ + + EE + +F ++R GM
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSG-------------YVRAGAREEMVRVFAMMRRGGMGL 208
Query: 215 DWCTFSIVLKACAGL--VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ V+K C+G T A AVH + K G + D + +A+I YA+ G++ +
Sbjct: 209 NSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAA 268
Query: 273 VFDKMTYHDLVSWNSILKAY----ALHGQ--AKEALQLFSNM---NVQPDSATFVSLLSA 323
+F + ++V +N+++ + + G+ A EAL L+S + +QP TF S+L A
Sbjct: 269 LFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRA 328
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPD 381
C+ AG ++ G ++ +++ Q D + + ++DL G + + + R P + D
Sbjct: 329 CNLAGYLEFGKQIHGQVIK---YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHD 384
Query: 382 SVIWSVLLGSC 392
V W+ ++ C
Sbjct: 385 IVTWTAMVSGC 395
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 136 AHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
A +++ N L+ Y + A ++ + M RN +S+N +I A+ L ++E A+
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
+ R G+ D +++ L AC+ R AVH+L G ++
Sbjct: 101 R-------------RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVS 147
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
N+L+ Y++CG + +++VFD D VSWNS++ Y G +E +++F+ M +
Sbjct: 148 NSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMG 207
Query: 312 PDSATFVSLLSACSHAG-LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
+S S++ CS G + + H + G+ + + M+D+ + G ++EA
Sbjct: 208 LNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAA 267
Query: 371 KLIREMPMEPDSVIWSVLL-GSCR 393
L R + EP+ V+++ ++ G CR
Sbjct: 268 ALFRSV-QEPNVVMFNTMIAGFCR 290
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/454 (40%), Positives = 279/454 (61%), Gaps = 21/454 (4%)
Query: 140 VANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
V NAL++MY+K D A+ VFE M ++VISW S++ C + E
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTG---C----------VHNGSYE 50
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
EAL LF +++ G+ PD + VL ACA L VH+ K G + N+L+
Sbjct: 51 EALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLV 110
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
YA+CG I + +VFD M D+++W +++ YA +G+ +E+L ++BM V+PD
Sbjct: 111 SMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFI 170
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF+ LL ACSHAGLV+ G F SM E +G+ P +HYACM+DLLGR G+++EA++L+ +
Sbjct: 171 TFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQ 230
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
M ++PD+ +W LL +CR HG L E AA L +LEP +++ +V +SN+Y +G + +A
Sbjct: 231 MAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEA 290
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
R+ MK V K PG SWIE+ ++VH F S + HP+ I+ K++E++ +K GYV
Sbjct: 291 AKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYV 350
Query: 496 PETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNF 555
P+ + ALHD++EE KE L +HSEKLA+ F ++ + IRI KN+RIC DCH
Sbjct: 351 PDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTM----PPGAPIRIFKNLRICGDCHTA 406
Query: 556 MKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
MK S + + +++RDSN FHHF++ CSC+DYW
Sbjct: 407 MKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 440
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---M 308
++ NAL+ YA+ G + VF+KMT D++SW S++ +G +EAL+LF M
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+ PD ++LSAC+ +++ G +V + L++ G+ L +V + + G I +
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS-GLGSSLSVDNSLVSMYAKCGCIED 121
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
A K+ M ++ D + W+ L+ ++G R
Sbjct: 122 ANKVFDSMEIQ-DVITWTALIVGYAQNGRGR 151
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 2 LHSTQIY-ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+H QI A + ACA ++ Q+H + + + L V N L++MYAK G ++D
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS--GLGSSLSVDNSLVSMYAKCGCIED 121
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
A +FD M ++V++WTALI GYAQ+G E + ++ P+ + +L +C
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACS- 180
Query: 120 LHGKLV 125
H LV
Sbjct: 181 -HAGLV 185
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/565 (36%), Positives = 319/565 (56%), Gaps = 38/565 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q + ++N I YAK G L+ A +F + + V SW ALI G+AQ+G+ + L L
Sbjct: 383 QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHL---L 439
Query: 100 LQYFF----PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK- 150
Q + P+ F+++S+L++C +L +GK +H L+ L+ +V +L++ Y
Sbjct: 440 FQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHC 499
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A A +F+ M+ +N++SWN+MI+ + L E+L LFR+ E
Sbjct: 500 GKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPY-------------ESLALFRKSLSE 546
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ V AC+ L R H + K +D + ++I YA+ G I S
Sbjct: 547 GIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKES 606
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
++VFD + ++ SWN+I+ A+ +HG KEA++L+ M PD T++ +L AC HA
Sbjct: 607 RKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHA 666
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GLV+EG K F M + + P+L+HYAC++D+L R GR+ +A +L+ EMP E D+ IWS
Sbjct: 667 GLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSS 726
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL SCR G + E A KL +LEP + +V +SN+Y G ++ R +R+ MK +
Sbjct: 727 LLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGL 786
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQR---EAIFKKLEELIGQLKGMGYVPETSLALHD 504
+K G SWIE+ RV+ F G P+ I+++LEE I ++ GY P TS LH+
Sbjct: 787 QKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEI---GYKPNTSSVLHE 843
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
+ EE K + L HSEKLA+ F ++ + + +RI KN+RIC DCHN KL S +
Sbjct: 844 VGEEEKIDILRGHSEKLAISFGLLKT----TKGTTLRIYKNLRICADCHNAAKLISKAVE 899
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EIVVRD+ RFHHF+D +CSC DYW
Sbjct: 900 REIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L + + L AC +I+ +LH+ +++ + D + LI MYA G D+
Sbjct: 40 LQAKEAIGLLLQACGNQKDIETGRRLHK-FVSDSTHYRNDYVLNTRLIKMYAMCGSPLDS 98
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC-- 117
R +FD M +N++ W AL+SGY ++G + ++F L+ F P+ F+ SV+ +C
Sbjct: 99 RLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGG 158
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
D G+++H + +K L V+V NAL+ MY K A DEA KVF+ M N++SWNSM
Sbjct: 159 ILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSM 218
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I AF + +L +M L EG+ PD T +L CAG
Sbjct: 219 ICAFSENGFSRDSFDLLMEM------------LGEEGLLPDVVTVVTILPVCAGEGEVDI 266
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H L K G ++ ++ NA+++ Y++CG ++ ++ F K ++VSWN+++ A++L
Sbjct: 267 GMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSL 326
Query: 295 HGQAKEALQLFSNMNVQ-----PDSATFVSLLSAC 324
G EA L M +Q + T +++L AC
Sbjct: 327 EGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 123/238 (51%), Gaps = 19/238 (7%)
Query: 139 YVANA-LINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
YV N LI MY+ + ++ VF+NME +N+I WN++++ + L +++F + +
Sbjct: 79 YVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVS 138
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
+ + PD TF V+KAC G++ R +H ++ K G D + NA
Sbjct: 139 DTD------------FQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNA 186
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQP 312
L+ Y +CG++ + +VFD M +LVSWNS++ A++ +G ++++ L M + P
Sbjct: 187 LVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLP 246
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
D T V++L C+ G V G + H + G+ ++ MV + + G + EA+
Sbjct: 247 DVVTVVTILPVCAGEGEVDIGMGI-HGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQ 303
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/652 (33%), Positives = 345/652 (52%), Gaps = 82/652 (12%)
Query: 8 YATLFHACALH-GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFG----YLDDAR 62
YA++ AL + KQ +Q H + + V+N L+++Y++ L AR
Sbjct: 151 YASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTS--VSNALVSVYSRCASSPSLLHSAR 208
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN---------------- 106
+FD++P+++ SWT +++GY ++G CF L LL+ N
Sbjct: 209 KVFDDIPEKDERSWTTMMTGYVKNG----CFDLGKELLKGMDENMKLVAYNAMISGYVNC 264
Query: 107 ---------------------EFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVA 141
EF+ SV+ +C GK VHA L+ D +
Sbjct: 265 GLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFD 323
Query: 142 NALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE-- 197
N+L+ +Y K C +EA +FE M ++++SWN++++ + + +A +F +MK +
Sbjct: 324 NSLVTLYYK-CGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 198 ----------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
EE L LF ++REG P FS +K+CA L + H+
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQ 442
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GF+ NALI YA+CG + ++QVF M D VSWN+++ A HG EA
Sbjct: 443 LVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEA 502
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ ++ M ++PD TF+++L+ACSHAGLV +G K F+SM + + P DHYA ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLID 562
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LL R G+ EAE +I +P +P + IW LL CR HG L +AA KL L P
Sbjct: 563 LLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ +SN+Y +G + + +RK M+ V+K SWIE+E +VH F HP+ EA+
Sbjct: 623 YMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEE-HKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+K L++L +++ +GYVP+TS LHD+E + HKE+ L HSEK+A+ F +M
Sbjct: 683 YKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMK----LPPG 738
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI KN+R C DCHNF + S ++ ++I++RD RFHHF++ CSC ++W
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 201/485 (41%), Gaps = 122/485 (25%)
Query: 14 ACALHGNIKQ-AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK-- 70
A A+HGNI Q H H++N LI++Y K LD AR LFDE+ +
Sbjct: 33 ARAVHGNIITFGFQPHAHILN-------------RLIDVYCKSSELDYARQLFDEISEPD 79
Query: 71 -------------------------------RNVVSWTALISGYAQHGNAEECFRLFCSL 99
R+ V + A+I+G++ + + LFC +
Sbjct: 80 KIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKM 139
Query: 100 L-QYFFPNEFSLASV-----LISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ F P++F+ ASV L+ D HA ALK V+NAL+++YS+ CA
Sbjct: 140 KHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSR-CA 198
Query: 154 D------EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE---------- 197
A KVF+++ ++ SW +M+ + EL M
Sbjct: 199 SSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMI 258
Query: 198 ---------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK---Y 245
+EAL + R++ G+ D T+ V++ACA + VH+ + + +
Sbjct: 259 SGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF 318
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY------------- 292
F D N+L+ Y +CG + ++ +F+KM DLVSWN++L Y
Sbjct: 319 SFHFD----NSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 293 ------------------ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
A +G +E L+LFS M +P F + +C+ G
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G + FH+ L G L ++ + + G + EA+++ R MP DSV W+ L+ +
Sbjct: 435 NGQQ-FHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAA 492
Query: 392 CRKHG 396
+HG
Sbjct: 493 LGQHG 497
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 146/362 (40%), Gaps = 90/362 (24%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS----------------------------CAD 154
+ VH + F H ++ N LI++Y KS CA
Sbjct: 34 RAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCAS 93
Query: 155 E----AWKVFEN--MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
A VFE + R+ + +N+MI F AI LF KMK+
Sbjct: 94 GDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKH------------ 141
Query: 209 REGMAPDWCTFSIVLKACAGLV-TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS- 266
EG PD T++ VL A +V E+ H+ K G T ++NAL+ Y+RC S
Sbjct: 142 -EGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASS 200
Query: 267 ---ISLSKQVFDKMTYHD--------------------------------LVSWNSILKA 291
+ +++VFD + D LV++N+++
Sbjct: 201 PSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISG 260
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
Y G +EAL++ M ++ D T+ S++ AC++A L+Q G +V +L
Sbjct: 261 YVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSF 320
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
D+ +V L + G+ EA + +MP + D V W+ LL G A+L ++
Sbjct: 321 HFDN--SLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 409 KQ 410
K+
Sbjct: 378 KE 379
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/608 (35%), Positives = 335/608 (55%), Gaps = 36/608 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA +++ +++ I N E DL V+ L++MY K +D A+ LFDE
Sbjct: 242 VISACAKLEDLETGEKVYA-FIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLV 125
N+ A+ S Y + G E +F ++ P+ S+ S + SC L GK
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 126 HALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
H L+ ++ + NALI+MY K C D A+++F+ M + V++WNS++A +
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMK-CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 184 EAQAIELFAKMKNE------------------EEALFLFRQLQ-REGMAPDWCTFSIVLK 224
A E F M + EEA+ +F +Q +EG+ D T +
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
AC L A ++ I K G + D + L+ ++RCG + +F+ +T D+ +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W + + A A+ G A+ A++LF +M ++PD FV L+ACSH GLVQ+G ++F+SML
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ HGV P+ HY CMVDLLGR G + EA +LI +MPMEP+ VIW+ LL +CR G +A
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
AA K++ L P + +V +SN+Y +G +N +R MK +RK PG S I+I +
Sbjct: 659 AYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGK 718
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
HEF SG + HP+ I L+E+ + +G+VP+ S L D++E+ K L HSEKL
Sbjct: 719 THEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKL 778
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
A+ + +++ + + IRI+KN+R+C DCH+F K AS + +EI++RD+NRFH+ +
Sbjct: 779 AMAYGLISS----NKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQG 834
Query: 582 ICSCNDYW 589
CSC D+W
Sbjct: 835 KCSCGDFW 842
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 168/342 (49%), Gaps = 23/342 (6%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
ACA +Q+H ++ +DLFV N L++ YA+ G LD AR +FDEM +R
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVK--MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYLHGKLV 125
NVVSWT++I GYA+ A++ LF ++ + PN ++ V+ +C D G+ V
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
+A ++ + + +AL++MY K A D A ++F+ N+ N+M +
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN------- 311
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ + EAL +F + G+ PD + + +C+ L + H + +
Sbjct: 312 ------YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GFE I NALI Y +C + ++FD+M+ +V+WNSI+ Y +G+ A +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 305 FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
F M + + ++ +++S L +E +VF SM GV
Sbjct: 426 FETMP-EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 23/262 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALI----NMYSKSCADEAWKVFENME-FRNVISWNSMIAA 177
K+ H K LD V L+ + ++ A +VFEN E + +NS+I
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ + L +AI LF +M N G++PD TF L ACA + +
Sbjct: 109 YASSGLCNEAILLFLRMMNS-------------GISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H LI K G+ D + N+L+H YA CG + +++VFD+M+ ++VSW S++ YA
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
AK+A+ LF M V P+S T V ++SAC+ ++ G KV+ + + N G+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMV 274
Query: 354 ACMVDLLGRVGRILEAEKLIRE 375
+ +VD+ + I A++L E
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDE 296
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/590 (34%), Positives = 326/590 (55%), Gaps = 50/590 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ CA G + +H I + + + +N L++MY+K G LD A +F++M
Sbjct: 256 SVLVGCANSGTLSLGKAVHSLAIKS--TFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKL 124
+RNVVSWT++I+GY + G ++ RL + + + + S+L +C +GK
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKD 373
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKL 183
VH +++++++V NAL++MY+K + D A VF M +++ISWN+MI +
Sbjct: 374 VHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELK---- 429
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
PD T + +L ACA L +H I
Sbjct: 430 ------------------------------PDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G+ D +ANAL+ Y +CG + L++ +FD + DLVSW ++ Y +HG EA+
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIA 519
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M ++PD +F+S+L ACSH+GL+++G + F+ M + + P+L+HYACMVDLL
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLL 579
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R G + +A + I +P+ PD+ IW LL CR + + LAE A ++ +LEP ++ +V
Sbjct: 580 SRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYV 639
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAIF 479
++NIY + + + + +R+++ +RK PG SWIEI+ +V+ F SG HP + I
Sbjct: 640 LLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIE 699
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
L+++ ++K GY P+T AL + +E KE L HSEKLA+ F ++ R
Sbjct: 700 SLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL----ALPPRKT 755
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R+ KN+R+C DCH K S +EIV+RDSNRFHHFK+ CSC +W
Sbjct: 756 VRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 205/442 (46%), Gaps = 73/442 (16%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYL----------- 58
+L+ C G++K+ ++ + M E +++++ N +++ YAK G
Sbjct: 142 SLYATC---GDLKEGRRVFDTM------EKKNVYLWNFMVSEYAKIGDFKESICLFKIMV 192
Query: 59 ---------DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF- 108
+ A LFD++ R+V+SW ++ISGY +G E ++ ++ +
Sbjct: 193 EKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLA 252
Query: 109 SLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFEN 162
++ SVL+ C GK VH+LA+K + + + +N L++MYSK C D A +VFE
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSK-CGDLDGALRVFEK 311
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
M RNV+SW SMIA + + + A+ L +Q+++EG+ D + +
Sbjct: 312 MGERNVVSWTSMIAG-------------YTRDGRSDGAIRLLQQMEKEGVKLDVVATTSI 358
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L ACA + + VH I E + + NAL+ Y +CGS+ + VF M D+
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDI 418
Query: 283 VSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
+SWN+++ ++PDS T +L AC+ ++ G ++ +L
Sbjct: 419 ISWNTMIG------------------ELKPDSRTMACILPACASLSALERGKEIHGYILR 460
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRL 400
N G +VDL + G +L +L+ +M D V W+V++ H G +
Sbjct: 461 N-GYSSDRHVANALVDLYVKCG-VLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAI 518
Query: 401 AELAATKLKQLEPGDSLGFVQM 422
A + +EP D + F+ +
Sbjct: 519 ATFNEMRDAGIEP-DEVSFISI 539
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 187/426 (43%), Gaps = 65/426 (15%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T+ Y+++ CA ++ ++H + +N N D + L+++YA G L + R +
Sbjct: 99 TKTYSSVLQLCAGSKSLTDGKKVHSIIKSN--NVAVDEVLGLKLVSLYATCGDLKEGRRV 156
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL 124
FD M K+NV W ++S YA+ G+ +E LF +++ + GK
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE----------------KGIEGKR 200
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
+ A ++F+ + R+VISWNSMI+ + + L
Sbjct: 201 ----------------------------PESASELFDKLCDRDVISWNSMISGYVSNGLT 232
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ +E++ +Q+ G+ D T VL CA T AVHSL K
Sbjct: 233 ERGLEIY-------------KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
FE +N L+ Y++CG + + +VF+KM ++VSW S++ Y G++ A++L
Sbjct: 280 STFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRL 339
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
M V+ D S+L AC+ +G + G V H ++ + + L ++D+
Sbjct: 340 LQQMEKEGVKLDVVATTSILHACARSGSLDNGKDV-HDYIKANNMESNLFVCNALMDMYT 398
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA-TKLKQLEPGDSLGFV 420
+ G + A + M ++ D + W+ ++G + T L A L LE G +
Sbjct: 399 KCGSMDGANSVFSTMVVK-DIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGY 457
Query: 421 QMSNIY 426
+ N Y
Sbjct: 458 ILRNGY 463
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 128/315 (40%), Gaps = 65/315 (20%)
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
F ++ N E A+ L Q+ + T+S VL+ CAG + VHS+I D
Sbjct: 76 FCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVD 133
Query: 251 TVIANALIHAYARCGSISLSKQV------------------------------------- 273
V+ L+ YA CG + ++V
Sbjct: 134 EVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 274 --------------FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
FDK+ D++SWNS++ Y +G + L+++ M + D AT
Sbjct: 194 KGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLAT 253
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
+S+L C+++G + G K HS+ +++ ++D+ + G + A ++ +M
Sbjct: 254 IISVLVGCANSGTLSLG-KAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNIY---CLSGSF 432
E + V W+ ++ + G + + A L+Q+E G L V ++I SGS
Sbjct: 313 G-ERNVVSWTSMIAGYTRDGRS---DGAIRLLQQMEKEGVKLDVVATTSILHACARSGSL 368
Query: 433 NKARLIRKEMKGSRV 447
+ + + +K + +
Sbjct: 369 DNGKDVHDYIKANNM 383
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 332/600 (55%), Gaps = 47/600 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVT--NHLINMYAKFGYLDDARHLF 65
+ TL G +++A L M EP D V N +I+ Y G +DDA LF
Sbjct: 151 WTTLVDGLLRLGIVQEAETLFWAM------EPMDRDVAAWNAMIHGYCSNGRVDDALQLF 204
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCD------- 118
+MP R+V+SW+++I+G +G +E+ LF ++ + L+S ++ C
Sbjct: 205 CQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMV----ASGVCLSSGVLVCGLSAAAKI 260
Query: 119 --YLHGKLVHALALKFSLDAHV--YVANALINMYSKSCA--DEAWKVFENMEFRNVISWN 172
+ G +H K D H +V+ +L+ Y+ C + A +VF + +++V+ W
Sbjct: 261 PAWRVGIQIHCSVFKLG-DWHFDEFVSASLVTFYA-GCKQMEAACRVFGEVVYKSVVIWT 318
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+++ + +A+E+F +M R + P+ +F+ L +C GL
Sbjct: 319 ALLTGYGLNDKHREALEVFGEM-------------MRIDVVPNESSFTSALNSCCGLEDI 365
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+H+ K G E + +L+ Y++CG +S + VF + ++VSWNS++
Sbjct: 366 ERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGC 425
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
A HG AL LF+ M V PD T LLSACSH+G++Q+ F + V
Sbjct: 426 AQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLT 485
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
++HY MVD+LGR G + EAE ++ MPM+ +S++W LL +CRKH LA+ AA ++
Sbjct: 486 IEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIF 545
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
++EP S +V +SN+Y S + + LIR++MK + V K PG SW+ ++ + H+F S
Sbjct: 546 EIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSAD 605
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
+ HP E I++KLE L +LK +GYVP+ ALHD+E E KEE L +HSE+LA+ F +++
Sbjct: 606 RSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLS 665
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E S I +MKN+R+C DCHN +KL + ++ +EIVVRDS+RFH FK+ ICSC DYW
Sbjct: 666 T----VEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 190/439 (43%), Gaps = 61/439 (13%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEP-QDLFVTNHLINMYAKFGYLDDARH 63
+Y + HA A + +++A+ L F P +D+ N +I G + AR
Sbjct: 86 VSLYTIMLHAYAQNHRLREAIDL-------FRRIPFKDVVSWNSIIKGCLHCGDIVTARK 138
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGK 123
LFDEMP+R VVSWT L+ G + G +E LF ++
Sbjct: 139 LFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAME----------------------- 175
Query: 124 LVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+D V NA+I+ Y S D+A ++F M R+VISW+SMIA
Sbjct: 176 ---------PMDRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLD--- 223
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
E+AL LFR + G+ L A A + R +H +
Sbjct: 224 ----------HNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSV 273
Query: 243 AKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G + D ++ +L+ YA C + + +VF ++ Y +V W ++L Y L+ + +EA
Sbjct: 274 FKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREA 333
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L++F M +V P+ ++F S L++C ++ G KV H+ G+ +V
Sbjct: 334 LEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERG-KVIHAAAVKMGLESGGYVGGSLVV 392
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSL 417
+ + G + +A + + + E + V W+ ++ C +HG A L L++ D +
Sbjct: 393 MYSKCGYVSDAVYVFKGIN-EKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGI 451
Query: 418 GFVQMSNIYCLSGSFNKAR 436
+ + SG KAR
Sbjct: 452 TVTGLLSACSHSGMLQKAR 470
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 328/591 (55%), Gaps = 30/591 (5%)
Query: 8 YATLFHACALHGN--IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y T+ +CA G+ ++ ++H H I DL V N LI+MYAK G A +F
Sbjct: 32 YVTVLKSCAHLGDDYLEDGKEIHRHAIAQ--GFGTDLVVQNSLIHMYAKCGSFKFAAGVF 89
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-GK 123
D+M +N++S+T++I Y E + L+ +L + P+ ++ A+ L C + G+
Sbjct: 90 DKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIREGE 149
Query: 124 LVHALALKFSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H V +NAL+ MY + A W VF+ + ++++ S+N+MIA
Sbjct: 150 AIHVKLGNHERRTPV-CSNALVGMYGRFGRIASAKW-VFDGIRYKDLASYNNMIA----- 202
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+FAK + +A+ L+ +++ + P+ T++ VL AC+ L +H
Sbjct: 203 --------VFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDACSKLGALTEGKEIHKK 254
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ D AL++ YA+CGS ++ VF+ ++ +W S++ AY+ GQ++
Sbjct: 255 VKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYR 314
Query: 302 LQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+ + MN V PD TF ++ +ACSH+GL EG F +M E+H +VP HY CM+D
Sbjct: 315 LEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMID 374
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGRVGR+ EAE+L+R MP PD V W++LL +C+ +G+ ++ A ++ +L P DS
Sbjct: 375 LLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGP 434
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ M N+Y +G + ++K +K + K PG S IE + R+HEF G HP + I
Sbjct: 435 YLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEI 494
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+L+E+ QL GY P+T L D+ EE K E L HSE++AL ++ + +
Sbjct: 495 RARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDA----GA 550
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+KN+RIC DCH+F KL S +L ++++VRDS+RFH F+ CSC DYW
Sbjct: 551 TLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 601
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 58/304 (19%)
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE-- 232
+ A++ L +A++LF K NEE LQ+ + T+ VLK+CA L +
Sbjct: 1 MGAYQENDLHKKALQLFKKSINEE--------LQQ-----NQATYVTVLKSCAHLGDDYL 47
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+H GF D V+ N+LIH YA+CGS + VFDKM +L+S+ S+++AY
Sbjct: 48 EDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAY 107
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ EA +L+ M + PD + + L+ C ++EG + H L NH
Sbjct: 108 THTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCP---TIREGEAI-HVKLGNHERRTP 163
Query: 350 LDHYACMVDLLGRVGRILEAE-------------------------------KLIREMP- 377
+ A +V + GR GRI A+ L EM
Sbjct: 164 VCSNA-LVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEG 222
Query: 378 --MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL-EPGDSLGFVQMSNIYCLSGSFNK 434
+EP+ ++ +L +C K G + K+K +P D + N+Y GS ++
Sbjct: 223 RNLEPNLWTYTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHE 282
Query: 435 ARLI 438
AR +
Sbjct: 283 ARAV 286
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/598 (34%), Positives = 335/598 (56%), Gaps = 37/598 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ T AC+ G +K+ MQ H + Q +V + L++MY++ +++ A + D
Sbjct: 119 VFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQ--YVKSALVHMYSRCSHVELALQVLD 176
Query: 67 EMPKR---NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----D 118
+P ++ S+ ++++ + G EE + ++ + + V+ C D
Sbjct: 177 TVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRD 236
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIA 176
G VHA L+ L +V + LI+MY K C + A VF+ ++ RNV+ W +++
Sbjct: 237 LQLGLRVHARLLRGGLMFDEFVGSMLIDMYGK-CGEVLNARNVFDGLQNRNVVVWTALMT 295
Query: 177 AFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
A+ ++N EE+L LF + REG P+ TF+++L ACAG+ RH
Sbjct: 296 AY---------------LQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRH 340
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ + K GF++ ++ NALI+ Y++ GSI S VF M Y D+++WN+++ Y+
Sbjct: 341 GDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSH 400
Query: 295 HGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG K+ALQ+F +M P+ TF+ +LSA SH GLV+EG + ++ N + P L+
Sbjct: 401 HGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLE 460
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY CMV LL R G + EAE ++ ++ D V W LL +C H L A + Q+
Sbjct: 461 HYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQM 520
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+P D + +SN+Y + ++ IRK M+ ++K PG SW++I N +H F S G
Sbjct: 521 DPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSN 580
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP+ I+KK+++L+ +K +GYVP + LHD+E+E KE L +HSEKLAL + +M
Sbjct: 581 HPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIP 640
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + IRI+KN+R+C DCH +KL S + + I+VRD+NRFHHF+D C+C D+W
Sbjct: 641 S----PAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 186/366 (50%), Gaps = 32/366 (8%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--LQYF 103
N L+++Y K G L AR+LFD MP RNVVSW L++GY GN E LF ++ LQ
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 104 FPNEFSLASVLISCDYLHGKLV------HALALKFSLDAHVYVANALINMYSK-SCADEA 156
PNE+ + L +C HG V H L KF L H YV +AL++MYS+ S + A
Sbjct: 114 CPNEYVFTTALSACS--HGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELA 171
Query: 157 WKVFENME---FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+V + + ++ S+NS++ A + EEA+ + R++ E +A
Sbjct: 172 LQVLDTVPGEHVNDIFSYNSVLNA-------------LVESGRGEEAVEVLRRMVDECVA 218
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
D T+ V+ CA + + VH+ + + G D + + LI Y +CG + ++ V
Sbjct: 219 WDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNV 278
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLV 330
FD + ++V W +++ AY +G +E+L LF+ M+ + P+ TF LL+AC+ +
Sbjct: 279 FDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAAL 338
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+ G+ + H+ +E G + ++++ + G I + + +M + D + W+ ++
Sbjct: 339 RHGD-LLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMIC 396
Query: 391 SCRKHG 396
HG
Sbjct: 397 GYSHHG 402
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/498 (37%), Positives = 290/498 (58%), Gaps = 29/498 (5%)
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE---- 155
PN+F+ VL +C + GK VH +KF V V N L++MY E
Sbjct: 7 LPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIE 66
Query: 156 -AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A KVF+ M + +SW++MI + ++ +A+ LFR++Q +G+ P
Sbjct: 67 FARKVFDEMYKSDSVSWSAMIGGY-------------VRVGRSSDAINLFREMQIKGVCP 113
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T VL AC GL V S + K + + ++NALI +A+CG + + +F
Sbjct: 114 DEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLF 173
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
M ++VSW S++ A+HG+ EA+ +F M V PD F+ LLSACSH+GLV
Sbjct: 174 RSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVD 233
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + F SM ++ +VP+++HY CMVD+L R G + EA K ++EMP++P+ V+W L+ +
Sbjct: 234 KGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINA 293
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR HGE +L E +L + EP +V +SNIY + K IR+ M ++K P
Sbjct: 294 CRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIP 353
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G + IE++N ++EF +G K H Q + I++ ++E+ ++K GY+P T+ L DI++E KE
Sbjct: 354 GSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKE 413
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L HSEKLA+ FA++N ++IRI+KN+R+C DCH+ K S + +EIVVRD
Sbjct: 414 DTLNRHSEKLAIAFALLNTPP----GTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRD 469
Query: 572 SNRFHHFKDRICSCNDYW 589
NRFHHFK+ +CSC D+W
Sbjct: 470 RNRFHHFKNGLCSCRDFW 487
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 80/419 (19%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMY----AKFGYLDDAR 62
Y + ACA GN+ +H ++ F +E + V N L++MY G ++ AR
Sbjct: 13 YPFVLKACAGIGNLNLGKSVHGSVMKFGFGDE---VNVQNTLVHMYCCCRGGEGGIEFAR 69
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH 121
+FDEM K + VSW+A+I GY + G + + LF + ++ P+E ++ SVL +C L
Sbjct: 70 KVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLG 129
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
GK V + K + +V ++NALI+M++K D+A +F +M RN++SW S+I
Sbjct: 130 ALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIG 189
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ + + EA+ +F ++ R G+ PD F +L AC+
Sbjct: 190 GL---AMHGRGV----------EAVAVFEEMVRSGVTPDDVVFIGLLSACS--------- 227
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-----TYHDLVSWNSILKA 291
HS G + K+ FD M + + ++
Sbjct: 228 --HS------------------------GLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDM 261
Query: 292 YALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV----- 346
G KEAL+ M + P+ + +L++AC G ++ G K+ ++ N +
Sbjct: 262 LCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNY 321
Query: 347 VPQLDHYACMVDLLGRVGRILEA--EKLIREMP----MEPDSVIWSVLLGSCRKHGETR 399
V + YA M D + RI EA K ++++P +E D+ I+ + G + H +++
Sbjct: 322 VLLSNIYAKMSDWEKKT-RIREAMDMKGMKKIPGSTMIELDNEIYEFVAGD-KSHAQSK 378
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/513 (38%), Positives = 298/513 (58%), Gaps = 32/513 (6%)
Query: 104 FPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAW 157
P+ F+ + VL +C D ++GK +H L K +++++ N ++N+Y C + +A
Sbjct: 7 LPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYG-LCGEMGDAM 65
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------E 199
+FE M R+ ++WN +IA A F +M N+ E
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
A+ LF +L+ E + P+ T VL ACA L VH K GF+ + + N LI
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
Y +CG + +++VF +M +VSW++++ A+HGQA+EAL LFS M V+P+ T
Sbjct: 186 MYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVT 245
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
F+ LL ACSH GL+ EG + F SM ++GV+PQ++HY C+VDL R G + EA + I M
Sbjct: 246 FIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
P++P+ V+W LLG C+ H LAE A L +L+P + +V +SNIY + + A
Sbjct: 306 PIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAA 365
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
+RK MK V+K G S I + VHEF +G + HPQ E I K ++L+ ++K GY P
Sbjct: 366 RVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAP 425
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFM 556
+TS+ L D+EE+ KE+ LY HSEKLA+VF +M E + IRIMKN+R+C DCH +
Sbjct: 426 KTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTT----PEGTPIRIMKNLRVCEDCHAAL 481
Query: 557 KLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K+ S ++ +EI+VRD NRFH F+D CSC D+W
Sbjct: 482 KIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 149/312 (47%), Gaps = 34/312 (10%)
Query: 16 ALHGNIKQAMQLHEHMINNFPNEPQ-DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVV 74
L G + AM L E M PQ D N +I AK G +D A F MP +NV
Sbjct: 56 GLCGEMGDAMLLFEKM-------PQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVR 108
Query: 75 SWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALA 129
SWT++ISG+ Q G E LF L + PNE ++ SVL +C D G++VH +
Sbjct: 109 SWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYS 168
Query: 130 LKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
K +V+V N LI+MY K C + A +VF ME R V+SW++MIA + QA
Sbjct: 169 TKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGL---AMHGQA- 224
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYG 246
EEAL LF ++ + G+ P+ TF +L AC+ GL+ E S+ A YG
Sbjct: 225 ---------EEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGR-RFFASMTADYG 274
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQ---AKEAL 302
++ ++R G + + + M + V W ++L +H A+EA+
Sbjct: 275 VIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAI 334
Query: 303 QLFSNMNVQPDS 314
+ S ++ D
Sbjct: 335 KHLSELDPLNDG 346
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 13/183 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G++ +HE+ + +++ V N LI+MY K G L++AR +F EM
Sbjct: 146 VSVLAACADLGDLDLGRIVHEYSTKS--GFKRNVHVCNTLIDMYVKCGCLENARRVFYEM 203
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL-----HG 122
+R VVSW+A+I+G A HG AEE LF +++ PN + +L +C ++
Sbjct: 204 EERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGR 263
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFRA 180
+ ++ + + + +++++S++ +EA + +M + N + W +++
Sbjct: 264 RFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLG---G 320
Query: 181 CKL 183
CK+
Sbjct: 321 CKV 323
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/615 (33%), Positives = 328/615 (53%), Gaps = 75/615 (12%)
Query: 46 NHLINMYAKFGYLDDARHLFDEM----PKRNVVSWTALISGYAQHGNAEECFRLFCSLL- 100
N ++ A+ G +DDA L M P+ NV +W ++SG ++HG E + S+L
Sbjct: 208 NAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK 267
Query: 101 QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
Q P+ +++S+L S HG +H L+ L+ VY AL++MY+K C D
Sbjct: 268 QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAK-CGRLD 326
Query: 155 EAWKVFENMEFRNVISWNSM-----------------------------------IAAFR 179
A KVF+ +E RN+ +WNS+ I +
Sbjct: 327 CAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYS 386
Query: 180 ACKLEAQAIELFAKMKNE----------------------EEALFLFRQLQREGMAPDWC 217
+QA+ L ++K E++ + ++Q++G+ P
Sbjct: 387 MNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLV 446
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T S++L+ACAGL ++ +H + ++ D V++ ALI Y++ GS+ +K +F+ +
Sbjct: 447 TMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESI 506
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+LV N++L A+HGQ +EA++LF +M ++PDS TF +LL+AC GLV EG
Sbjct: 507 QQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGW 566
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F M +GV P ++YACMVDLL R G + EA I P++P + W LL C
Sbjct: 567 EYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSI 626
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG LAE+AA L +LEP +S ++ M N+Y +++A ++ MK V PG S
Sbjct: 627 HGNLALAEVAARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWS 686
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
WI+IE +H F GK HP+ I+++L L+ Q+K GYVP+TS ++++EE KE+ L
Sbjct: 687 WIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLL 746
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
H+EKLA+ + ++ + R+ +R+MKN R+C DCH K S L ++I++RD+ R
Sbjct: 747 LGHTEKLAITYGLIRSDA---SRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVR 803
Query: 575 FHHFKDRICSCNDYW 589
FHHF D CSCNDYW
Sbjct: 804 FHHFVDGKCSCNDYW 818
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 204/478 (42%), Gaps = 59/478 (12%)
Query: 3 HSTQIYATLFHACA-LHGNI-------KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK 54
+S + +L CA LHG+ + A QLH + +D VT L+++ A+
Sbjct: 42 YSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRT--GLSRDPRVTCALVDLLAR 99
Query: 55 FGYLDDARHLFDEMPK---RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA 111
G L E + ++ V W ++ A+ +E +F + P
Sbjct: 100 LGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPRR---- 155
Query: 112 SVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVI 169
G+ VHA ALK +LDAH V L MY+++ AD A +V + M +V+
Sbjct: 156 ---------RGRAVHAYALKLALDAHPLVPGFLAGMYAEN-ADVAAATRVLDAMGAGSVV 205
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKN----------------------EEEALFLFRQL 207
WN+++A L A+EL A+M + EAL + +
Sbjct: 206 PWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASM 265
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
++G+ PD T S +LK+ A RH +H + E D AL+ YA+CG +
Sbjct: 266 LKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRL 325
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQ---AKEALQLFSNMNVQPDSATFVSLLSAC 324
+++VFD + + +L +WNS++ YA G+ A E ++L + PD T+ L++
Sbjct: 326 DCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGY 385
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP---MEPD 381
S G + + ++ GV P + + ++ G ++ EM ++P
Sbjct: 386 SMNGQSSQAVLLLRQ-IKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPS 444
Query: 382 SVIWSVLLGSCRKHG-ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
V SVLL +C + + EL L++ D + + ++Y GS A++I
Sbjct: 445 LVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVI 502
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 303/545 (55%), Gaps = 54/545 (9%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +I+ Y K G + R +FD M R+V+SW +I+GYA G +E RLF +
Sbjct: 64 RDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEM 123
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV 159
+ + S+ S + C + +EA+ +
Sbjct: 124 PERNLVSWNSMLSGFVKCGNV---------------------------------EEAFGL 150
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F M R+V+SWNSM+A + C EAL LF Q++ G+ P T
Sbjct: 151 FSEMPCRDVVSWNSMLACYAQC-------------GKPNEALALFDQMRAVGVKPTEATV 197
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+L ACA L +H+ I E ++++ AL+ YA+CG ISL+ QVF+ M
Sbjct: 198 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 257
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D+++WN+I+ A+HG KEA QLF M +V+P+ TFV++LSACSHAG+V EG K+
Sbjct: 258 KDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKL 317
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
M ++G+ P+++HY C++DLL R G + EA +LI MPMEP+ LLG CR HG
Sbjct: 318 LDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHG 377
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
L E+ +L L+P S ++ +SNIY + ++ AR +R MK + + K PG+S I
Sbjct: 378 NFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVI 437
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLY 515
E++ VH F +G HP+ I+ KL E+ +LK +GY +T L D+EEE KE L
Sbjct: 438 ELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALA 497
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HSEKLA+ + +++ S + IRI+KN+R+C DCH+ KL S + G+EI+VRD NRF
Sbjct: 498 VHSEKLAIAYGLLHLDS----KEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRF 553
Query: 576 HHFKD 580
HHF+D
Sbjct: 554 HHFED 558
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T+ V+KAC VH+ + K GFE D+ I N+LIH YA + +KQ+F
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+ D+VSWN+++ Y G+ +F M V D ++ ++++ + G + E ++F
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM-VCRDVISWNTIINGYAIVGKIDEAKRLF 120
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL---GSCRK 394
M E + L + M+ + G + EA L EMP D V W+ +L C K
Sbjct: 121 DEMPERN-----LVSWNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSMLACYAQCGK 174
Query: 395 HGET 398
E
Sbjct: 175 PNEA 178
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L ACA G + + + LH ++ +N + V L++MYAK G + A +F+ M
Sbjct: 199 SLLSACAHLGALDKGLHLHTYINDN--RIEVNSIVGTALVDMYAKCGKISLATQVFNAME 256
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL-----HGK 123
++V++W +I+G A HG+ +E +LF + + PN+ + ++L +C + K
Sbjct: 257 SKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQK 316
Query: 124 LVHALALKFSLDAHVYVANALINMYSKS 151
L+ ++ + ++ V + +I++ +++
Sbjct: 317 LLDCMSSSYGIEPKVEHYDCVIDLLARA 344
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/560 (36%), Positives = 312/560 (55%), Gaps = 34/560 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEM--PKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
FV LI+MY K +D+AR +F+E ++ V + AL+SGY + E LF +
Sbjct: 85 FVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMN 144
Query: 101 QYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ P N +L ++ +C + G +H LK+ D+ V V N I MY K +
Sbjct: 145 EEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVN 204
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A K+F+ M + +ISWN+M++ + L +EL+ R + G+ P
Sbjct: 205 YAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELY-------------RNMDMNGVHP 251
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T VL +CA L + V I GF + + NALI+ YARCG+++ ++ VF
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVF 311
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M LVSW +I+ Y +HG + A+QLF M ++PD FV +LSACSHAGL
Sbjct: 312 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + F M N+ + P +HY+CMVDLLGR GR+ EA+ LI MP++PD +W LLG+
Sbjct: 372 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ H LAELA ++ +LEP + +V +SNIY + + IR MK +++K P
Sbjct: 432 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 491
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S++E++ RVH F G + H Q + I++ LEEL + PE + EE +K+
Sbjct: 492 GCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKD 547
Query: 512 --EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
++ HSEKLA+ F ++N + + + I+KN+RIC DCH F K+ S ++ +++ V
Sbjct: 548 GFTRVGVHSEKLAVAFGLLNTTT----GAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTV 603
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+ RFHHF++ CSC DYW
Sbjct: 604 RDATRFHHFRNGSCSCKDYW 623
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V N I MY K G ++ A+ LFDEMP + ++SW A++SGYAQ+G A L+ ++
Sbjct: 186 DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD 245
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLV-HALALKF---SLDAHVYVANALINMYSKSCAD- 154
+ P+ +L VL SC L + V H + K ++ ++ NALINMY++ C +
Sbjct: 246 MNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYAR-CGNL 304
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A VF+ M R ++SW ++I + + E A+ LF+++ R G+
Sbjct: 305 TKAQAVFDGMPERTLVSWTAIIGG-------------YGMHGHGEIAVQLFKEMIRSGIE 351
Query: 214 PDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
PD F VL AC AGL T++ + Y E + ++ R G + ++
Sbjct: 352 PDGTAFVCVLSACSHAGL-TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQ 410
Query: 272 QVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSN-MNVQPDSATFVSLLS 322
+ + M D W ++L A +H + A F + ++P++ + LLS
Sbjct: 411 TLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLS 463
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+AL L+ Q+ R G P+ TF LK+CA L S H I K G + + LI
Sbjct: 32 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91
Query: 259 HAYARCGSISLSKQVFDKMTYHD---LVSWNSILKAYALHGQAKEALQLFSNMN---VQP 312
Y + + +++VF++ +H V +N+++ Y + + EA+ LF MN V
Sbjct: 92 SMYCKGSLVDNARKVFEE-NFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPV 150
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+S T + L+ AC ++ G+ + S L+ +G + C + + + G + A+KL
Sbjct: 151 NSVTLLGLIPACVSPINLELGSSLHCSTLK-YGFDSDVSVVNCFITMYMKCGSVNYAQKL 209
Query: 373 IREMPMEPDSVIWSVLLGSCRKHG-ETRLAEL 403
EMP++ + W+ ++ ++G T + EL
Sbjct: 210 FDEMPVK-GLISWNAMVSGYAQNGLATNVLEL 240
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 326/558 (58%), Gaps = 30/558 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+V N +++MY + +++DA +F+ + ++ ++ ++I+G+ G + R+ S++
Sbjct: 144 YVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGE 203
Query: 103 FFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEA 156
+ S +VL C + L G VHA ALK L+ +VYV +AL++MY K CA +A
Sbjct: 204 VEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDA 263
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGMAP 214
FE + +NV+SW +++ A+ +NE E+AL LF L+ EG+ P
Sbjct: 264 HSAFEVLPEKNVVSWTAVMTAY---------------TQNERFEDALQLFLDLEIEGVRP 308
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ T+++ L +CAGL ++ +A+ + K G + NAL++ Y++ GSI + +VF
Sbjct: 309 NEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVF 368
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
M + D+VSWNS++ YA HG A+EA+ +F +M + P TFV +L AC+ GLV
Sbjct: 369 LSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVD 428
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG + M++ G+ P +HY CMV LL R GR+ EAE+ I + D V W LL S
Sbjct: 429 EGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSS 488
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ + L A ++ QL+P D +V +SN+Y + ++ +RK M+ VRK P
Sbjct: 489 CQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEP 548
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G+SWI++ + VH F S K H I KL+ELIGQ+K +GYVP ++ LHD+E E KE
Sbjct: 549 GVSWIQVGSEVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKE 608
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
E L +HSEK+AL F +++ E IRIMKN+RIC DCH +KL S + ++IVVRD
Sbjct: 609 EHLMYHSEKMALAFGLIHS----PEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRD 664
Query: 572 SNRFHHFKDRICSCNDYW 589
+ RFH D +CSC+DYW
Sbjct: 665 TVRFHCIDDGVCSCDDYW 682
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 175/370 (47%), Gaps = 27/370 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ NHLI Y K G L AR +FD MP RN VS L+SGYA G + L +
Sbjct: 44 DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALALLKA-- 101
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
F NE+ L++ L + Y G+ H A+K L H YV NA+++MY + CA +
Sbjct: 102 ADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQ-CAHVE 160
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A KVFEN+ ++ ++NSMI F +I + M E E
Sbjct: 161 DAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQW------------- 207
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D ++ VL CA VH+ K E + + +AL+ Y +C + F
Sbjct: 208 DHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAF 267
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+ + ++VSW +++ AY + + ++ALQLF ++ V+P+ T+ L++C+ ++
Sbjct: 268 EVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALK 327
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
GN + S ++ G L ++++ + G I +A ++ MP D V W+ ++
Sbjct: 328 NGNALSASAMKT-GHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWR-DVVSWNSVIIG 385
Query: 392 CRKHGETRLA 401
HG R A
Sbjct: 386 YAHHGLAREA 395
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/596 (35%), Positives = 327/596 (54%), Gaps = 38/596 (6%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
L CA G+ H +I D+ + LINMY+K + R DEM
Sbjct: 56 LLQLCAKTGSSMGGRACHAQIIR--IGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLV 113
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDY----LHGKLV 125
++++ I Q+ + +L + + P NEF+++SVL +C + L +
Sbjct: 114 KSLILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQL 173
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
HA ++K ++D++ +V AL+++Y+K S +A ++FE+M +N ++W+SM+A +
Sbjct: 174 HAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGY------ 227
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ +EAL LF Q G D S + ACAGL T VH++ K
Sbjct: 228 -------VQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHK 280
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALHGQAKEALQ 303
GF + +A++LI YA+CG I + VF+ +V WN+++ +A H A+EA+
Sbjct: 281 SGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMI 340
Query: 304 LFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF M + PD T+VS+L+ACSH GL +EG K F M+ H + P + HY+CM+D+L
Sbjct: 341 LFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDIL 400
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLG-------SCRKHGETRLAELAATKLKQLEP 413
GR G + +A LI M S +W + G SCR +G AE+AA L ++EP
Sbjct: 401 GRAGLVQKAYDLIGRMSFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEP 460
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
++ + ++NIY + ++ RK ++ + VRK G SWIEI+N++H F G + HP
Sbjct: 461 NNAGNHILLANIYAANKKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHP 520
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
Q + + KL+ L+ +LK + Y +T+ LHD+EE K L HHSEKLA+ F G +
Sbjct: 521 QIDDNYAKLDNLVVELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITF-----GLV 575
Query: 534 CRERSV-IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
C + IRI+KN+RIC DCH FMKL S +EI+VRD+NRFHHFKD +CSC ++
Sbjct: 576 CLPTEIPIRIIKNLRICGDCHTFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 341/571 (59%), Gaps = 31/571 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
Y+T+ C I++ QLH H++ + +E V N L+ +Y+K G +++A +F+
Sbjct: 217 YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETA---VGNALLTLYSKCGMMEEAEIVFE 273
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLH 121
+ +RN++SWTA I+G+ QHG+ ++ + F + + PNEF+ + VL SC D++
Sbjct: 274 SLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFID 333
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENM-EFRNVISWNSMIAAFR 179
G++ H +K + + V+V A+I+MYS DEA K F+ M + +SWN++IA +
Sbjct: 334 GRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYV 393
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ +A+E F +M E+ A F T+S + KAC+ + +H
Sbjct: 394 LNEKIEKAMEAFCRMVKEDVACNEF-------------TYSNIFKACSSFPSLATTVQIH 440
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S + K E + +A++LI AY +CGS+ + QVF +++ D+VSWNSI+KAY+ +G
Sbjct: 441 SRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPW 500
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+A+ L M +P S TF+++LSACSH+GLVQEG + F SM++++ + P+ H +CM
Sbjct: 501 KAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCM 560
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VD+LGR G++ A I+++ M+P + IW LL +CR + ++AE A K+ LEP D+
Sbjct: 561 VDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDA 620
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SN+Y G + A R+ M+ + K PG SWIE+ N++++F S K HP+
Sbjct: 621 TVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMP 680
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
+++KL++L+ Q++ +GY P T+ LH + KE+ + +HSEKLA+ F ++ SL
Sbjct: 681 KVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKLAVCFGLL---SLPPG 737
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
+ IR++KN+R+C+DC++ MK S + + I
Sbjct: 738 KP-IRVLKNLRVCLDCYSTMKYISRITDRYI 767
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 258/523 (49%), Gaps = 68/523 (13%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F S+ YA A + + LH H++ + + L++ Y + G L +
Sbjct: 799 FQSSSDTYAKAIDMYARDRALYRGRALHAHLV--IIGLARLTYFAAKLMSFYTECGQLSN 856
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
AR LFD++P N+ W L A+ G EE F + + PN+F L S+L +C +
Sbjct: 857 ARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGH 916
Query: 120 LH----GKLVHALALKFSLDAHVYVANALINMYSK------SCADEAWKVFENMEF---- 165
L G+ +H + LK S ++ Y+ +ALI MYSK +C W V +++
Sbjct: 917 LSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAM 976
Query: 166 --------------------------RNVISWNSMIAAFRACKLEAQAIELFAKMK---- 195
NV+SWN++IA F ++ E+F M
Sbjct: 977 VSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGV 1036
Query: 196 ------------------NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ E F+++ +G P T S +L AC + RH
Sbjct: 1037 EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKE 1096
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H G E D + +AL+ YA+CG IS +K +F M + V+WNS++ YA HG
Sbjct: 1097 IHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGY 1156
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
EA++LF+ M + + D TF ++L+ACSHAG+V+ G +F M E + + P+L+HYA
Sbjct: 1157 CNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYA 1216
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLLGR G++ EA LI+ MP+EPD +W LLG+CR HG LAE+AA L +LEP
Sbjct: 1217 CMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPE 1276
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
+ +SN+Y +G + A ++K MK + K+PG SWIE
Sbjct: 1277 SPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 181/371 (48%), Gaps = 33/371 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV LI+MYAK G +D A ++D+M + + LIS YA++G + F++F +
Sbjct: 147 DEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIG 206
Query: 101 QYFF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
PN ++ +++L C + GK +HA +K + V NAL+ +YSK +
Sbjct: 207 NMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMME 266
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA VFE++ RN+ISW + +I F + + ++AL F ++ G+ P
Sbjct: 267 EAEIVFESLRQRNIISWTA-------------SINGFYQHGDFKKALKQFSMMRESGIEP 313
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ TFSIVL +C + H+ + K G + A+I Y+ G + +++ F
Sbjct: 314 NEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQF 373
Query: 275 DKMTY-HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH---- 326
+M VSWN+++ Y L+ + ++A++ F M +V + T+ ++ ACS
Sbjct: 374 KQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSL 433
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
A VQ HS L V L + +++ + G + A ++ ++ + D V W+
Sbjct: 434 ATTVQ-----IHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQIS-DADVVSWN 487
Query: 387 VLLGSCRKHGE 397
++ + ++G+
Sbjct: 488 SIIKAYSQNGD 498
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 139/276 (50%), Gaps = 24/276 (8%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFR 179
G+ H +K L + +V +LI+MY+K C D A +V++ M + + N +I+A+
Sbjct: 132 GRRWHCFVVKIGLGSDEFVCTSLIDMYAK-CGEVDSAVRVYDKMTSLDAATCNCLISAYA 190
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
QA ++F ++ N G P+ T+S +L C + + +H
Sbjct: 191 RNGFFVQAFQVFMQIGNM-------------GTRPNHYTYSTMLAVCGTISAIQEGKQLH 237
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K + +T + NAL+ Y++CG + ++ VF+ + +++SW + + + HG K
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK 297
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE--GNKVFHSMLENHGVVPQLDHYA 354
+AL+ FS M ++P+ TF +L++C G V++ ++FH+ + G+ +
Sbjct: 298 KALKQFSMMRESGIEPNEFTFSIVLASC---GCVKDFIDGRMFHTQVIKKGMASGVFVGT 354
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
++D+ +G + EAEK ++M +V W+ L+
Sbjct: 355 AIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIA 390
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/590 (34%), Positives = 327/590 (55%), Gaps = 50/590 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ CA G + +H I + + + + +N L++MY+K G LD A +F++M
Sbjct: 256 SVLVGCANSGTLSLGKAVHSLAIKS--SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKL 124
+RNVVSWT++I+GY + G ++ +L + + + ++ S+L +C +GK
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAFRACKL 183
VH +++++++V NAL++MY+K + EA VF M +++ISWN+MI +
Sbjct: 374 VHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELK---- 429
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
PD T + VL ACA L +H I
Sbjct: 430 ------------------------------PDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G+ D +ANAL+ Y +CG + L++ +FD + DLVSW ++ Y +HG EA+
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M ++PD +F+S+L ACSH+GL+++G + F+ M + + P+L+HYACMVDLL
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLL 579
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R G + +A + I +P+ PD+ IW LL CR + + LAE A ++ +LEP +S +V
Sbjct: 580 SRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYV 639
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAIF 479
++NIY + + + + +R+++ +RK PG SWIEI+ +V+ F SG HP + I
Sbjct: 640 LLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIE 699
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
L+++ ++K G+ P+T AL + +E KE L HSEKLA+ F ++ R
Sbjct: 700 SLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLT----LPPRKT 755
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH K S +EIV+RD NRFHHFKD CSC +W
Sbjct: 756 IRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 203/436 (46%), Gaps = 70/436 (16%)
Query: 16 ALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYL----------------- 58
A G++K+ ++ + M E +++++ N +++ YAK G
Sbjct: 145 ATCGDLKEGRRVFDTM------EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 59 ---DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF-SLASVL 114
+ A LFD++ R+V+SW ++ISGY +G E ++ ++ + ++ SVL
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 115 ISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNV 168
+ C GK VH+LA+K S + + +N L++MYSK C D A +VFE M RNV
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK-CGDLDGALRVFEKMGERNV 317
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SW SMIA + + + A+ L +Q+++EG+ D + +L ACA
Sbjct: 318 VSWTSMIAG-------------YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACAR 364
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ + VH I E + + NAL+ YA+CGS+ + VF M D++SWN++
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTM 424
Query: 289 LKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ ++PDS T +L AC+ ++ G ++ +L N G
Sbjct: 425 IG------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRN-GYSS 465
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAAT 406
+VDL + G +L +L+ +M D V W+V++ H G +A
Sbjct: 466 DRHVANALVDLYVKCG-VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM 524
Query: 407 KLKQLEPGDSLGFVQM 422
+ +EP D + F+ +
Sbjct: 525 RDAGIEP-DEVSFISI 539
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 185/426 (43%), Gaps = 65/426 (15%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T+ Y+++ CA + ++H + +N + L + L++ YA G L + R +
Sbjct: 99 TKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGL--KLVSFYATCGDLKEGRRV 156
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL 124
FD M K+NV W ++S YA+ G+ +E LF +++ + GK
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE----------------KGIEGKR 200
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
+ A+++F+ + R+VISWNSMI+ + + L
Sbjct: 201 ----------------------------PESAFELFDKLCDRDVISWNSMISGYVSNGLT 232
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
E L +++Q+ G+ D T VL CA T AVHSL K
Sbjct: 233 -------------ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
FE +N L+ Y++CG + + +VF+KM ++VSW S++ Y G++ A++L
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
M V+ D S+L AC+ +G + G V H ++ + + L ++D+
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV-HDYIKANNMESNLFVCNALMDMYA 398
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA-TKLKQLEPGDSLGFV 420
+ G + A + M ++ D + W+ ++G + T L A L LE G +
Sbjct: 399 KCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGY 457
Query: 421 QMSNIY 426
+ N Y
Sbjct: 458 ILRNGY 463
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/557 (37%), Positives = 308/557 (55%), Gaps = 54/557 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV L++MYAK G + DA +FD M R+VV WTA+I+ Y Q + LF +
Sbjct: 166 DLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQ 225
Query: 101 QY-FFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV 159
+ F +E + SV A A+ D + ++ A + V
Sbjct: 226 EEGFLGDEITAISV-------------ASAVGQLGDGRMAISRARL-------------V 259
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ ME RN ISWNSM++ + + +AL LF Q+Q P+ T
Sbjct: 260 FDRMEERNGISWNSMLSGY-------------TQNGRPTDALSLFNQMQASECDPNPVTA 306
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD--KM 277
I++ AC+ L ++ +H+ + + DT + NA++ Y +CG + + ++F+ ++
Sbjct: 307 LIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCEL 366
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
D+ SWN ++ Y +HG KEAL+LFS M V+P+ TF S+LSACSHAGL+ EG
Sbjct: 367 GERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGR 426
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
K F M + V P++ HYACMVD+LGR G + EA +LI+++P P +W LL +CR
Sbjct: 427 KCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRI 485
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG T L E+AA L QLEP + +V MSNIY S + + ++R+ MK ++K S
Sbjct: 486 HGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFS 545
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
IE VH F + + P +++K+E L ++K +GYVP+ S LHD+E E KE L
Sbjct: 546 VIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLL 605
Query: 515 YHHSEKLALVFAI--MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
+HSEKLA+ F I M+QG I++ KN+R+C DCH K S + G++I+VRD
Sbjct: 606 NYHSEKLAVAFGIMKMDQG------MPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDG 659
Query: 573 NRFHHFKDRICSCNDYW 589
NRFHHF+ CSC DYW
Sbjct: 660 NRFHHFQGGRCSCGDYW 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
+A EA+ L+ +QR G+ + T+ VLK CA + VH + + GF D
Sbjct: 107 YANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSD 166
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
+ AL+ YA+CG I + +VFD+M D+V W +++ Y + +AL LF M
Sbjct: 167 LFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQE 226
Query: 311 Q---PDSATFVSLLSACSHAG----LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
+ D T +S+ SA G + VF M E +G+ + M+ +
Sbjct: 227 EGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGI-----SWNSMLSGYTQN 281
Query: 364 GRILEAEKLIREMPM---EPDSVIWSVLLGSCRKHGETRLA 401
GR +A L +M +P+ V +++ +C G L
Sbjct: 282 GRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLG 322
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/590 (34%), Positives = 326/590 (55%), Gaps = 50/590 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ CA G + +H I + + + + +N L++MY+K G LD A +F++M
Sbjct: 118 SVLVGCAKSGTLSLGKAVHSLAIKS--SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 175
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKL 124
+RNVVSWT++I+GY + G ++ L + + + ++ S+L +C +GK
Sbjct: 176 ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 235
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKL 183
VH ++ ++++V NAL++MY+K + E A VF M +++ISWN+M+ +
Sbjct: 236 VHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELK---- 291
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
PD T + +L ACA L +H I
Sbjct: 292 ------------------------------PDSRTMACILPACASLSALERGKEIHGYIL 321
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G+ D +ANAL+ Y +CG + L++ +FD + DLVSW ++ Y +HG EA+
Sbjct: 322 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 381
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M ++PD +F+S+L ACSH+GL+++G + F+ M + + P+L+HYACMVDLL
Sbjct: 382 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLL 441
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R G + +A K I +P+ PD+ IW LL CR + + LAE A ++ +LEP ++ +V
Sbjct: 442 SRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYV 501
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAIF 479
++NIY + + + + +R+++ +RK PG SWIEI+ RV+ F SG HP + I
Sbjct: 502 LLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIE 561
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
L+++ ++K GY P+T AL + +E KE L HSEKLA+ F ++ R
Sbjct: 562 SLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLT----LPPRKT 617
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH K S +EIV+RDSNRFHHFKD CSC +W
Sbjct: 618 IRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 202/436 (46%), Gaps = 70/436 (16%)
Query: 16 ALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYL----------------- 58
A G++K+ ++ + M E +++++ N +++ YAK G
Sbjct: 7 ATCGDLKEGRRVFDTM------EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 59 ---DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF-SLASVL 114
+ A LFD++ R+V+SW ++ISGY +G E ++ ++ + ++ SVL
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120
Query: 115 ISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNV 168
+ C GK VH+LA+K S + + +N L++MYSK C D A +VFE M RNV
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK-CGDLDGALRVFEKMGERNV 179
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SW SMIA + + + A+ L +Q+++EG+ D + +L ACA
Sbjct: 180 VSWTSMIAG-------------YTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACAR 226
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ + VH I + + NAL+ YA+CGS+ + VF M D++SWN++
Sbjct: 227 SGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM 286
Query: 289 LKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ ++PDS T +L AC+ ++ G ++ +L N G
Sbjct: 287 VG------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRN-GYSS 327
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAAT 406
+VDL + G +L +L+ +M D V W+V++ H G +A
Sbjct: 328 DRHVANALVDLYVKCG-VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM 386
Query: 407 KLKQLEPGDSLGFVQM 422
+ +EP D + F+ +
Sbjct: 387 RDAGIEP-DEVSFISI 401
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 163/383 (42%), Gaps = 63/383 (16%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE 107
L++ YA G L + R +FD M K+NV W ++S YA+ G+ +E LF
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF----------- 50
Query: 108 FSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRN 167
+ V + S+S ++ +F+ + R+
Sbjct: 51 -----------------------------KIMVEKGIEGKRSESASE----LFDKLCDRD 77
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
VISWNSMI+ + + L E L +++Q+ G+ D T VL CA
Sbjct: 78 VISWNSMISGYVSNGLT-------------ERGLGIYKQMMYLGIDVDLATIISVLVGCA 124
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
T AVHSL K FE +N L+ Y++CG + + +VF+KM ++VSW S
Sbjct: 125 KSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 184
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++ Y G + A+ L M V+ D S+L AC+ +G + G V H ++ +
Sbjct: 185 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV-HDYIKAN 243
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
+ L ++D+ + G + A + M ++ D + W+ ++G + T L
Sbjct: 244 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGELKPDSRTMACILP 302
Query: 405 A-TKLKQLEPGDSLGFVQMSNIY 426
A L LE G + + N Y
Sbjct: 303 ACASLSALERGKEIHGYILRNGY 325
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 324/584 (55%), Gaps = 34/584 (5%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLIN---MYAKFGYLDDARHLFDEMPKRNVVSW 76
++ + Q+ + I N D+ V LIN + Y+D A HLFD++ ++++ +
Sbjct: 41 SLNELKQIQAYTIKT--NLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILF 98
Query: 77 TALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----YLHGKLVHALALK 131
+ GYA+ + F LF LL P++++ +S+L +C G +H A+K
Sbjct: 99 NIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVK 158
Query: 132 FSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
L+ ++Y+ LINMY++ C D A VF+ ME ++S+N++I +
Sbjct: 159 LGLNHNIYICPTLINMYAE-CNDMNAARGVFDEMEQPCIVSYNAIITGY----------- 206
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
A+ EAL LFR+LQ + P T V+ +CA L +H + K GF+
Sbjct: 207 --ARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDK 264
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ ALI +A+CGS++ + +F+ M D +W++++ A+A HG +A+ +F M
Sbjct: 265 YVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMK 324
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
V+PD TF+ LL ACSHAGLV++G F+SM + +G+ P + HY CMVDLLGR G +
Sbjct: 325 REGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHL 384
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY 426
EA + ++ ++ ++W LL +C HG +A+ ++ +L+ +V +SN+Y
Sbjct: 385 DEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLY 444
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI 486
G + +RK MK V K PG S +E+ N VHEF SG H + + L+EL+
Sbjct: 445 ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELM 504
Query: 487 GQLKGMGYVPETSLALH-DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKN 545
++K +GYVP+TSL H D+EEE KE L +HSEKLA+ F ++N + IR+ KN
Sbjct: 505 KEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNT----PPGTTIRVAKN 560
Query: 546 IRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RIC DCHN KL S + G++IV+RD RFH F+D CSC D+W
Sbjct: 561 LRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/560 (35%), Positives = 311/560 (55%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+L + N L+ MY KFG + A+ + MP R+ V+W ALI G+A + F L
Sbjct: 393 NLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLR 452
Query: 101 QYFFPNEF----SLASVLISCDYL--HGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
+ P + +L S +S D L HG +HA + + +V ++LI MY++ C D
Sbjct: 453 EEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQ-CGD 511
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+ +F+ + +N +WN++++A A EEAL L +++ +G+
Sbjct: 512 LNTSNYIFDVLANKNSSTWNAILSAN-------------AHYGPGEEALKLIIKMRNDGI 558
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D +FS+ L +HSLI K+GFE + + NA + Y +CG I +
Sbjct: 559 HLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFR 618
Query: 273 VFDKMTYHDLVSWNSILKAYALHG---QAKEALQLFSNMNVQPDSATFVSLLSACSHAGL 329
+ + SWN ++ A A HG QA+EA ++ ++PD TFVSLLSACSH GL
Sbjct: 619 ILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGL 678
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V EG F SM GV ++H C++DLLGR G++ EAE I +MP+ P ++W LL
Sbjct: 679 VDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLL 738
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+C+ HG LA AA +L +L+ D +V SN+ + + +RK+M+ ++K
Sbjct: 739 AACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKK 798
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
P SW++++N+V F G + HPQ I+ KLEEL ++ GY+P+TS +L D +EE
Sbjct: 799 KPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQ 858
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE L++HSE++AL F ++N E S +RI KN+R+C DCH+ K+ S ++G++I++
Sbjct: 859 KEHNLWNHSERIALAFGLINSS----EGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIIL 914
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+ RFHHF CSC+DYW
Sbjct: 915 RDAYRFHHFSSGKCSCSDYW 934
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 216/432 (50%), Gaps = 32/432 (7%)
Query: 4 STQIYATLFHACALHGNIKQ-AMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
S+ + A+L AC G + + A Q+H H+I D+FV L++ Y FG++ +
Sbjct: 57 SSYVAASLVTACDRSGCMTEGAFQVHAHVIK--CGLACDVFVGTSLLHFYGTFGWVAEVD 114
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISC---- 117
+F E+ + N+VSWT+L+ GYA +G +E ++ L + + NE ++A+V+ SC
Sbjct: 115 MVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLV 174
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
D + G V +K LD V VAN+LI+M+ +EA VF++M+ R+ ISWNS+I
Sbjct: 175 DKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIIT 234
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A + E++L F Q++ D+ T S +L C R
Sbjct: 235 AS-------------VHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGR 281
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H ++ K G E + + N+L+ Y++ G ++ VF KM DL+SWNS++ ++ +G
Sbjct: 282 GLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNG 341
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
AL+L M + TF + LSAC + E K+ H+ + G+ L
Sbjct: 342 NYPRALELLIEMLQTRKATNYVTFTTALSACYNL----ETLKIVHAFVILLGLHHNLIIG 397
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+V + G+ G + A+++ + MP + D V W+ L+G + E A A L+ E
Sbjct: 398 NALVTMYGKFGSMAAAQRVCKIMP-DRDEVTWNALIGGHADNKEPNAAIEAFNLLR--EE 454
Query: 414 GDSLGFVQMSNI 425
G + ++ + N+
Sbjct: 455 GVPVNYITIVNL 466
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 192/383 (50%), Gaps = 30/383 (7%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFS 109
MY+KFG ++ A+H+FD+MP+RN SW L+SG+ + G ++ + FC +L++ P+ +
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 110 LASVLISCD----YLHGKL-VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENM 163
AS++ +CD G VHA +K L V+V +L++ Y E VF+ +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 164 EFRNVISWNSMIA--AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
E N++SW S++ A+ C +E + ++R+L+R+G+ + +
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCV---------------KEVMSVYRRLRRDGVYCNENAMAT 165
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
V+++C LV + V + K G + +AN+LI + C SI + VFD M D
Sbjct: 166 VIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERD 225
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+SWNSI+ A +G +++L+ FS M + + D T +LL C A ++ G + H
Sbjct: 226 TISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWG-RGLH 284
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE- 397
M+ G+ + ++ + + G+ +AE + +M E D + W+ ++ S +G
Sbjct: 285 GMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKM-RERDLISWNSMMASHVDNGNY 343
Query: 398 TRLAELAATKLKQLEPGDSLGFV 420
R EL L+ + + + F
Sbjct: 344 PRALELLIEMLQTRKATNYVTFT 366
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 152/289 (52%), Gaps = 25/289 (8%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V N LI+M+ +++A +FD+M +R+ +SW ++I+ +G+ E+ F +
Sbjct: 197 VANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTH 256
Query: 104 FPNEF-SLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAW 157
++ +++++L C G+ +H + +K L+++V V N+L++MYS++ +++A
Sbjct: 257 AKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAE 316
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
VF M R++ISWNSM+A+ +A+EL +M +A ++
Sbjct: 317 FVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA-------------TNYV 363
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
TF+ L AC L T + VH+ + G + +I NAL+ Y + GS++ +++V M
Sbjct: 364 TFTTALSACYNLETLK---IVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIM 420
Query: 278 TYHDLVSWNSILKAYALHGQ---AKEALQLFSNMNVQPDSATFVSLLSA 323
D V+WN+++ +A + + A EA L V + T V+LLSA
Sbjct: 421 PDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/561 (36%), Positives = 325/561 (57%), Gaps = 30/561 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
V N +I+MY+K G + +A +F+ +P RNV+SW A+I+GY N EE LF + +
Sbjct: 41 VGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKG 100
Query: 104 -FPNEFSLASVLISCDYL----HGKLVHALALK--FSLDAHVYVANALINMYSKSCAD-- 154
P+ ++ +S L +C G +HA ++ F A VA AL+++Y K C
Sbjct: 101 EVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVK-CRRMA 159
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA KVF+ +E ++V+SW+++I + A+ N +EA+ LFR+L+
Sbjct: 160 EARKVFDRIEEKSVMSWSTLILGY-------------AQEDNLKEAMDLFRELRESRHRM 206
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAK--YGFEDDTVIANALIHAYARCGSISLSKQ 272
D S ++ A +H+ K YG + +V AN+++ Y +CG +
Sbjct: 207 DGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSV-ANSVLDMYMKCGLTVEADA 265
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
+F +M ++VSW ++ Y HG +A++LF+ M ++PDS T++++LSACSH+GL
Sbjct: 266 LFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGL 325
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++EG K F + N + P+++HYACMVDLLGR GR+ EA+ LI +MP++P+ IW LL
Sbjct: 326 IKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLL 385
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
CR HG+ + + L + E + +V +SN+Y +G + ++ IR+ +K ++K
Sbjct: 386 SVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKRKGLKK 445
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK-GMGYVPETSLALHDIEEE 508
G SW+E++ +H F +G HP E I + L+E+ ++K MGYV + +LHD+EEE
Sbjct: 446 EAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSLHDVEEE 505
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K E L HSEKLA+ ++ +G + VIRI KN+R+C DCH F+K S +L V
Sbjct: 506 SKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKVLKIAFV 565
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+NRFH F++ +CSC DYW
Sbjct: 566 VRDANRFHRFENGLCSCGDYW 586
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
GK VH + K D V N++I+MYSK EA +VF + RNVISWN+MIA
Sbjct: 22 QGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAG-- 79
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ +N EEAL LFR+++ +G PD T+S LKAC+ +H
Sbjct: 80 -----------YTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIH 128
Query: 240 SLIAKYGFE--DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+ + ++GF + +A AL+ Y +C ++ +++VFD++ ++SW++++ YA
Sbjct: 129 AALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDN 188
Query: 298 AKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
KEA+ LF + + D S++ + L+++G ++ ++ + ++
Sbjct: 189 LKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVAN 248
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + G +EA+ L REM +E + V W+V++ KHG
Sbjct: 249 SVLDMYMKCGLTVEADALFREM-LERNVVSWTVMITGYGKHG 289
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 9/174 (5%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
+L C+ VH ++ K GF+ V+ N++I Y++CG + + +VF+ + +
Sbjct: 10 ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFH 338
++SWN+++ Y +EAL LF M + PD T+ S L ACS A EG ++ H
Sbjct: 70 VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQI-H 128
Query: 339 SMLENHGVVPQLDHYA---CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ L HG P L A +VDL + R+ EA K+ + E + WS L+
Sbjct: 129 AALIRHG-FPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIE-EKSVMSWSTLI 180
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 21 IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
++Q Q+H + I P ++ V N +++MY K G +A LF EM +RNVVSWT +I
Sbjct: 224 LEQGKQMHAYTIK-VPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMI 282
Query: 81 SGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
+GY +HG + LF + + P+ + +VL +C +
Sbjct: 283 TGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSH 322
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/484 (40%), Positives = 286/484 (59%), Gaps = 24/484 (4%)
Query: 126 HALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFRACK 182
H A+K + +H YVAN +++ YSK + A K+F+ M ++ ++ ++MI A+
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYFESA 60
Query: 183 LEA-------------QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
+ I FA EAL L++++ EG+ PD T +L ACA L
Sbjct: 61 YKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAEL 120
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLVSWNSI 288
T H + K G + NAL+ YA+CG+IS ++++FD+M ++VSW S+
Sbjct: 121 ATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSL 180
Query: 289 LKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ A++G KEAL+ F +M + P TFV +L ACSH G+V EG + F M E +
Sbjct: 181 IVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYD 240
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+VP+++HY CMVDLLGR G + EA I++MP++P++VIW LLG+C HG L A
Sbjct: 241 IVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFAR 300
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
+L QLEP DS +V +SN+Y ++ +R+ M VRK PG S +E+ N VHEF
Sbjct: 301 ARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEF 360
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
G + HPQ EAI+K L E+ +LK GYVP T+ L DIEEE KE L++HSEK+A+ F
Sbjct: 361 VMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAF 420
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
++N + IRI+KN+R+C DCH +KL S + ++IVVRD +RFHHF+D CSC
Sbjct: 421 MLINT----LPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSC 476
Query: 586 NDYW 589
DYW
Sbjct: 477 RDYW 480
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 63/288 (21%)
Query: 57 YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLI 115
Y + A +F+ MP++++V+W ++I+G+A +G E L+ + + P+ F++ S+L
Sbjct: 56 YFESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLS 115
Query: 116 SCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEF-RNVI 169
+C L G+ H +K L+ +++ NAL+++Y+K EA K+F+ M RNV+
Sbjct: 116 ACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVV 175
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SW S+I A+ F K EAL F+ ++REG+ P TF VL AC
Sbjct: 176 SWTSLIVGL--------AVNGFGK-----EALEHFKDMEREGLVPSEITFVGVLYAC--- 219
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVS---- 284
+ CG ++ + F +M +D+V
Sbjct: 220 --------------------------------SHCGIVNEGFEYFKRMKEQYDIVPRIEH 247
Query: 285 WNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS---HAGL 329
+ ++ G KEA +M +QP++ + +LL AC+ H GL
Sbjct: 248 YGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGL 295
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L ACA + + H +M+ N ++L N L+++YAK G + +AR +FDEM
Sbjct: 112 SLLSACAELATLVLGRRAHVYMVKVGLN--KNLHANNALLDLYAKCGTISEARKIFDEMG 169
Query: 70 -KRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLVHA 127
+RNVVSWT+LI G A +G +E F + + P+E + VL +C H +V+
Sbjct: 170 IERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACS--HCGIVNE 227
Query: 128 -------LALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAA 177
+ ++ + + ++++ ++ EA+ ++M + N + W +++ A
Sbjct: 228 GFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGA 286
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/590 (34%), Positives = 328/590 (55%), Gaps = 50/590 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ CA G + +H I + + + + +N L++MY+K G LD A +F++M
Sbjct: 256 SVLVGCANSGTLSLGKAVHSLAIKS--SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKL 124
+RNVVSWT++I+GY + G ++ +L + + + ++ S+L +C +GK
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAFRACKL 183
VH +++++++V NAL++MY+K + EA VF M +++ISWN+MI +
Sbjct: 374 VHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELK---- 429
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
PD T + VL ACA L +H I
Sbjct: 430 ------------------------------PDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G+ D +ANAL+ Y +CG + L++ +FD + DLVSW ++ Y +HG EA+
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M ++PD +F+S+L ACSH+GL+++G + F+ M + + P+L+HYACMVDLL
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLL 579
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R G + +A + + +P+ PD+ IW LL CR + + LAE A ++ +LEP ++ +V
Sbjct: 580 SRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYV 639
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAIF 479
++NIY + + + + +R+++ +RK PG SWIEI+ +V+ F SG HP + I
Sbjct: 640 LLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIE 699
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
L+++ ++K G+ P+T AL + +E KE L HSEKLA+ F ++ R
Sbjct: 700 SLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLT----LPPRKT 755
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH K S +EIV+RDSNRFHHFKD CSC +W
Sbjct: 756 IRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 203/436 (46%), Gaps = 70/436 (16%)
Query: 16 ALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYL----------------- 58
A G++K+ ++ + M E +++++ N +++ YAK G
Sbjct: 145 ATCGDLKEGRRVFDTM------EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 59 ---DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF-SLASVL 114
+ A LFD++ R+V+SW ++ISGY +G E ++ ++ + ++ SVL
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 115 ISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNV 168
+ C GK VH+LA+K S + + +N L++MYSK C D A +VFE M RNV
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK-CGDLDGALRVFEKMGERNV 317
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SW SMIA + + + A+ L +Q+++EG+ D + +L ACA
Sbjct: 318 VSWTSMIAG-------------YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACAR 364
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ + VH I E + + NAL+ YA+CGS+ + VF M D++SWN++
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTM 424
Query: 289 LKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ ++PDS T +L AC+ ++ G ++ +L N G
Sbjct: 425 IG------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRN-GYSS 465
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAAT 406
+VDL + G +L +L+ +M D V W+V++ H G +A
Sbjct: 466 DRHVANALVDLYVKCG-VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM 524
Query: 407 KLKQLEPGDSLGFVQM 422
+ +EP D + F+ +
Sbjct: 525 RDAGIEP-DEVSFISI 539
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 183/426 (42%), Gaps = 65/426 (15%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T+ Y ++ CA + ++H + +N L + L++ YA G L + R +
Sbjct: 99 TKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGL--KLVSFYATCGDLKEGRRV 156
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL 124
FD M K+NV W ++S YA+ G+ +E LF +++ + GK
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE----------------KGIEGKR 200
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
+ A+++F+ + R+VISWNSMI+ + + L
Sbjct: 201 ----------------------------PESAFELFDKLCDRDVISWNSMISGYVSNGLT 232
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
E L +++Q+ G+ D T VL CA T AVHSL K
Sbjct: 233 -------------ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
FE +N L+ Y++CG + + +VF+KM ++VSW S++ Y G++ A++L
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
M V+ D S+L AC+ +G + G V H ++ + + L ++D+
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV-HDYIKANNMESNLFVCNALMDMYA 398
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA-TKLKQLEPGDSLGFV 420
+ G + A + M ++ D + W+ ++G + T L A L LE G +
Sbjct: 399 KCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGY 457
Query: 421 QMSNIY 426
+ N Y
Sbjct: 458 ILRNGY 463
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 127/315 (40%), Gaps = 65/315 (20%)
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
F ++ + E A+ L Q+ + T+ VL+ CAGL + VHS+I D
Sbjct: 76 FCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVD 133
Query: 251 TVIANALIHAYARCGSISLSKQV------------------------------------- 273
+ L+ YA CG + ++V
Sbjct: 134 GALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 274 --------------FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
FDK+ D++SWNS++ Y +G + L ++ M + D AT
Sbjct: 194 KGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
+S+L C+++G + G K HS+ +++ ++D+ + G + A ++ +M
Sbjct: 254 IISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNIY---CLSGSF 432
E + V W+ ++ + G + + A L+Q+E G L V +++I SGS
Sbjct: 313 G-ERNVVSWTSMIAGYTRDGRS---DGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 433 NKARLIRKEMKGSRV 447
+ + + +K + +
Sbjct: 369 DNGKDVHDYIKANNM 383
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/457 (40%), Positives = 278/457 (60%), Gaps = 21/457 (4%)
Query: 137 HVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
++ V A+I+ YS+ ++A +F+ ME ++++ W++MI+ + A+
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGY-------------AESD 59
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
+EAL LF ++Q G+ PD T V+ ACA L A +H + K G + N
Sbjct: 60 KPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNN 119
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI YA+CG++ ++ VF+KM +++SW S++ A+A+HG A AL+ F M N++P
Sbjct: 120 ALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKP 179
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ TFV +L ACSHAGLV+EG + F SM H + P+ +HY CMVDL GR + +A +L
Sbjct: 180 NGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALEL 239
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
+ MP+ P+ VIW L+ +C+ HGE L E AA ++ +LEP VQ+SNIY +
Sbjct: 240 VETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRW 299
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
+R MK + K G S IE+ N+V+EF K+H Q + I++KL+E++ +LK +
Sbjct: 300 QDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLV 359
Query: 493 GYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDC 552
GY P T L D+EEE K+E + HSEKLAL + +M +G + S IRI+KN+R+C DC
Sbjct: 360 GYTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEG----KGSCIRIVKNLRVCEDC 415
Query: 553 HNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
H F+KL S + G EI+VRD RFHH+K +CSCNDYW
Sbjct: 416 HTFIKLVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 149/292 (51%), Gaps = 40/292 (13%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++L V +I+ Y++ G ++DAR +FD+M ++++V W+A+ISGYA+ +E LF S
Sbjct: 12 RNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLF-SE 70
Query: 100 LQYFF--PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+Q F P++ ++ SV+ +C L K +H K L + V NALI+MY+K C
Sbjct: 71 MQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAK-CG 129
Query: 154 D--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+ A VFE M+ RNVISW SMI A FA + AL F Q++ E
Sbjct: 130 NLGAARGVFEKMQSRNVISWTSMINA-------------FAIHGDASNALKFFYQMKDEN 176
Query: 212 MAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ P+ TF VL AC AGLV E + S+ ++ ++ + R +
Sbjct: 177 IKPNGVTFVGVLYACSHAGLVEEGRRT-FASMTNEHNITPKHEHYGCMVDLFGRANLLRD 235
Query: 270 SKQVFDKMTY-HDLVSWNSILKAYALHGQ-------AKEALQLFSNMNVQPD 313
+ ++ + M ++V W S++ A +HG+ AK+ L+L +PD
Sbjct: 236 ALELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLEL------EPD 281
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 14/178 (7%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G + +A +H ++ N L V N LI+MYAK G L AR +F++M
Sbjct: 85 SVISACARLGVLDRAKWIHMYVDKNGLGGA--LPVNNALIDMYAKCGNLGAARGVFEKMQ 142
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHAL 128
RNV+SWT++I+ +A HG+A + F + + PN + VL +C H LV
Sbjct: 143 SRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACS--HAGLVEEG 200
Query: 129 ALKFS--LDAHVYVA-----NALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAA 177
F+ + H +++++ ++ +A ++ E M NV+ W S++AA
Sbjct: 201 RRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAA 258
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/446 (42%), Positives = 270/446 (60%), Gaps = 32/446 (7%)
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F ++ N+ WN+MI + AIE + M++E G P+ T
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSE-------------GFLPNNFT 114
Query: 219 FSIVLKACAGLVTERHASAVHSLIAK---------YGFEDDTVIANALIHAYARCGSISL 269
F VLKACA L+ + +H+L+ K G + + +L+ YA+CG++
Sbjct: 115 FPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEK 174
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM------NVQPDSATFVSLLSA 323
++ VFD M D+VSW ++++ YAL+G KEA+ LF M ++PD TF+ LL
Sbjct: 175 ARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCG 234
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C+HAGLV EG + F+SM + P ++HY CMVDLLGR G + EA +LIR MPME +++
Sbjct: 235 CTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAI 294
Query: 384 IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+W LLG+CR H +T+LAELA +L +LEP +S +V +SNIY + +++A +R M
Sbjct: 295 VWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMN 354
Query: 444 GSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH 503
R++K PG SWIE++ VHEF G K HP E I+ KL+EL ++K GYVP T L
Sbjct: 355 EKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLF 414
Query: 504 DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
DIEEE KE L HSEKLA+ F +++ +VIR++KN+R+C DCH +KL S +
Sbjct: 415 DIEEEEKEHFLGCHSEKLAIAFGLISA----TPTAVIRVVKNLRVCGDCHMAIKLISSIT 470
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
G+EI VRD+NRFH F++ CSCNDYW
Sbjct: 471 GREITVRDNNRFHCFREGSCSCNDYW 496
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNE-------PQDLFVTNHLINMYA 53
FL + + + ACA +++ +++H ++ + ++ +++FV L++MYA
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYA 167
Query: 54 KFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY----FFPNEFS 109
K G ++ AR +FD MP++++VSW A+I GYA +G +E LF + + P+ +
Sbjct: 168 KCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNT 227
Query: 110 LASVLISCDYLHGKLV-------HALALKFSLDAHVYVANALINMYSKS-CADEAWKVFE 161
+L C H LV +++ FSL + ++++ ++ DEA ++
Sbjct: 228 FIGLLCGCT--HAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIR 285
Query: 162 NMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
NM N I W +++ A R + + Q EL K E E
Sbjct: 286 NMPMEANAIVWGALLGACRIHR-DTQLAELALKQLIELEP 324
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 334/599 (55%), Gaps = 36/599 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDD 60
+TQ L C ++++ MQ+ + I + +D+ LIN + +
Sbjct: 28 NTQNPILLISKC---NSLRELMQIQAYAIKS---HIEDVSFVAKLINFCTESPTESSMSY 81
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDY 119
ARHLF+ M + ++V + ++ GY++ N E F LF +L+ P+ ++ S+L +C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
G+ +H L++K LD +VYV LINMY++ D A VF+ + V+ +N+M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I + A+ EAL LFR++Q + + P+ T VL +CA L +
Sbjct: 202 ITGY-------------ARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL 248
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H K+ F + ALI +A+CGS+ + +F+KM Y D +W++++ AYA
Sbjct: 249 GKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYAN 308
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG+A++++ +F M NVQPD TF+ LL+ACSH G V+EG K F M+ G+VP +
Sbjct: 309 HGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIK 368
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY MVDLL R G + +A + I ++P+ P ++W +LL +C H LAE + ++ +L
Sbjct: 369 HYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+ +V +SN+Y + + +RK MK + K PG S IE+ N VHEF SG
Sbjct: 429 DDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGV 488
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALH-DIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+ + L+E++ +LK GYVP+TS+ +H ++ ++ KE L +HSEKLA+ F ++N
Sbjct: 489 KSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNT 548
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+R+C DCHN KL S + G+++V+RD RFHHF+D CSC D+W
Sbjct: 549 PP----GTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 307/551 (55%), Gaps = 30/551 (5%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEF 108
MYAK G D R +FDEM +++V WTA+I+ Y Q EE LF + Q +
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 109 SLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENM 163
++ SV + D + VH A + SL + V N+++ M++K ++A VF+ M
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
R+VISWNSM++ + QA E AL LF +++ P T I++
Sbjct: 121 MERDVISWNSMLSGYTQ---NGQATE----------ALLLFDEMRDSDCQPTPVTALIMV 167
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM--TYHD 281
ACA L H I E DT ++NAL+ YA+CG + + +F+ + T +
Sbjct: 168 SACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERN 227
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
SWN ++ Y +HG KEAL+LFS M V+P+ TF S+LSACSHAGL+ EG K F
Sbjct: 228 AGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFA 287
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
M + V + H+AC+VD+LGR G + EA LI+EMP P +W LL +C+ HG
Sbjct: 288 EM-KRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNM 346
Query: 399 RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
L + AA+ L QLEP + +V MSNIY S + + +R++MK ++K S IE
Sbjct: 347 ELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEY 406
Query: 459 ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHS 518
+ F + + +P R ++KK+E L ++K GYVP+ S ALHD+EEE KE L +HS
Sbjct: 407 GKDILGFHTADQENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHS 466
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
EKLA+ F ++ VIR+ KN+R+C DCH+ K S + ++I+VRD+NRFHHF
Sbjct: 467 EKLAVAFGVLK----IDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHF 522
Query: 579 KDRICSCNDYW 589
+ CSC DYW
Sbjct: 523 QGGTCSCKDYW 533
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 33/318 (10%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++K A +H + + ++L V N ++ M+ K G + AR +FD M +R+V+SW +
Sbjct: 73 GDVKNAHTVHGYAFRK--SLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNS 130
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS-CDYLH----GKLVHALALKFS 133
++SGY Q+G A E LF + A +++S C YL G+ H +
Sbjct: 131 MLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSR 190
Query: 134 LDAHVYVANALINMYSKSCAD--EAWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIE 189
++ ++NAL++MY+K C D +A +F + RN SWN +I+ + +A+E
Sbjct: 191 MEIDTNLSNALMDMYAK-CGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALE 249
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGF 247
LF++M Q EG+ P+ TF+ +L AC AGL+ E
Sbjct: 250 LFSRM-------------QEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTL 296
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYALHGQAKEALQLF 305
ED ++ R G + + + +M D V W ++L A +HG +
Sbjct: 297 EDKH--HACVVDMLGRAGLLQEAFDLIKEMPSPPSDGV-WGALLLACKIHGNMELGKTAA 353
Query: 306 SN-MNVQPDSATFVSLLS 322
SN + ++P+ + L+S
Sbjct: 354 SNLLQLEPNHTGYYVLMS 371
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/550 (37%), Positives = 294/550 (53%), Gaps = 57/550 (10%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
N I Y G + DAR +FD MP+R+ VS+ ++I GYA G+ RLF +L
Sbjct: 48 TNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLA-- 105
Query: 104 FPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENM 163
P + S++ F V + A +VFE M
Sbjct: 106 -PTPVTWTSMVAG---------------FCRAGDV---------------ESARRVFEEM 134
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
R+++SWN+MI+ +L EAL LFR + EG P+ T VL
Sbjct: 135 PERDLVSWNAMISGCVGNRLPV-------------EALCLFRWMMEEGFVPNRGTVVSVL 181
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
AC G VH + K D + AL+ YA+CG++ L+ +VF + +
Sbjct: 182 SACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTC 241
Query: 284 SWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+WN+++ A++G + +AL +F M V PD TFV +L ACSHAG V G + F++
Sbjct: 242 TWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYT 301
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
+ + +GV L+HYACMVDLL R G + EA KLI EMPM+PD V+W LLG CR H +
Sbjct: 302 IPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVK 361
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
+AE ++++ GD V +SN+Y G +N +R+ M+ + K PG S +E++
Sbjct: 362 MAENVISEMEATCSGDH---VLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMD 418
Query: 460 NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSE 519
+HEF SG K HP + I KL E+ G+++ GYV ET+ +DIE+E KE+ L +HSE
Sbjct: 419 GSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQALGYHSE 478
Query: 520 KLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
KLA+ F ++ + IRI+KN+R C DCH+F KL S + +EIVVRD RFHHF+
Sbjct: 479 KLAIAFGLIGG----PPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVRDRARFHHFR 534
Query: 580 DRICSCNDYW 589
CSCND+W
Sbjct: 535 GGACSCNDFW 544
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 30/314 (9%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T + ++ H A+ G++ A +L E ++ P ++ + + G ++ AR +
Sbjct: 77 TVSFNSMIHGYAVSGDVGSAQRLFERVLAPTP------VTWTSMVAGFCRAGDVESARRV 130
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL--- 120
F+EMP+R++VSW A+ISG + E LF +++ F PN ++ SVL +C
Sbjct: 131 FEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGAL 190
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAF 178
GK VH K L ++ AL++MY+K A E A +VF + RN +WN+MI
Sbjct: 191 ETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGL 250
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREG-MAPDWCTFSIVLKAC--AGLVTERHA 235
A+A++ +FRQ++ G +APD TF VL AC AG V +
Sbjct: 251 AMNGYSAKALD-------------MFRQMELNGTVAPDEVTFVGVLLACSHAGFV-DAGK 296
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYAL 294
+++ KYG E ++ AR G + + ++ +M D+V W ++L L
Sbjct: 297 EHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRL 356
Query: 295 HGQAKEALQLFSNM 308
H K A + S M
Sbjct: 357 HKNVKMAENVISEM 370
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
H ++H++ K GF T NA I Y G ++ +++VFD M D VS+NS++ YA
Sbjct: 29 HLPSLHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYA 88
Query: 294 LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+ G A +LF + + P T+ S+++ AG V+ +VF M P+ D
Sbjct: 89 VSGDVGSAQRLFERV-LAPTPVTWTSMVAGFCRAGDVESARRVFEEM-------PERDLV 140
Query: 354 ACMVDLLGRVGRILEAEKL 372
+ + G VG L E L
Sbjct: 141 SWNAMISGCVGNRLPVEAL 159
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--CS 98
D F+ L++MYAK G ++ A +F + RN +W A+I+G A +G + + +F
Sbjct: 208 DEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQME 267
Query: 99 LLQYFFPNEFSLASVLISCDYLHGKLVHA-------LALKFSLDAHVYVANALINMYSKS 151
L P+E + VL++C H V A + K+ ++ + ++++ ++S
Sbjct: 268 LNGTVAPDEVTFVGVLLACS--HAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARS 325
Query: 152 C-ADEAWKVFENMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMK 195
EA K+ M + +V+ W +++ R K A + ++M+
Sbjct: 326 GHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEME 371
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 327/591 (55%), Gaps = 30/591 (5%)
Query: 8 YATLFHACALHGN--IKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y T+ +CA G ++ ++H H I DL V N LI+MYAK G A +F
Sbjct: 86 YVTVLKSCAHLGEDYLEDGKEIHRHAIAQ--GFGTDLVVQNSLIHMYAKCGSFKFAAGVF 143
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-GK 123
++M +N++S+T++I Y E + L+ +L + P+ ++ A+ L C + G+
Sbjct: 144 EKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIREGE 203
Query: 124 LVHALALKFSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+H V +NAL+ MY + A W VF+ + ++++ S+N+MIA
Sbjct: 204 AIHVKLGNHERRTPV-CSNALVGMYGRFGRIASAKW-VFDGIRYKDLASYNNMIA----- 256
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+FAK + +A+ L+ +++ + P+ TF+ VL AC+ L +H
Sbjct: 257 --------VFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKK 308
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ D AL++ YA+CGS ++ VF+ ++ +W S++ AY+ GQ++
Sbjct: 309 VKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYR 368
Query: 302 LQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+ + MN V PD TF ++ +ACSH+GL EG F +M E+H +VP HY CM+D
Sbjct: 369 LEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMID 428
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGRVGR+ EAE+L+R MP PD V W++LL +C+ +G+ ++ A ++ +L P DS
Sbjct: 429 LLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGP 488
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
++ M N+Y +G + ++K +K + K PG S IE + R+HEF G HP + I
Sbjct: 489 YLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEI 548
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+L+E+ QL GY P+T L D+ EE K E L HSE++AL ++ + +
Sbjct: 549 RARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDA----GA 604
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ I+KN+RIC DCH+F KL S +L ++++VRDS+RFH F+ CSC DYW
Sbjct: 605 TLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 210/429 (48%), Gaps = 33/429 (7%)
Query: 28 HEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG 87
HE +I+ + ++ F+ N L+ Y + +DDA F E+ ++N S+ ++ Y ++
Sbjct: 3 HERIIDANLEQEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQEND 62
Query: 88 NAEECFRLF-CSLLQYFFPNEFSLASVLISC-----DYLH-GKLVHALALKFSLDAHVYV 140
++ +LF S+ + N+ + +VL SC DYL GK +H A+ + V
Sbjct: 63 LHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVV 122
Query: 141 ANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
N+LI+MY+K + + A VFE ME +N+IS+ SMI A+ +A EL+ KM +
Sbjct: 123 QNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLS--- 179
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
EG+ PD ++ L C T R A+H + + V +NAL+
Sbjct: 180 ----------EGIMPDIYAYAAALAVCP---TIREGEAIHVKLGNHE-RRTPVCSNALVG 225
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
Y R G I+ +K VFD + Y DL S+N+++ +A + +A+ L+ M N++P+ T
Sbjct: 226 MYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWT 285
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
F S+L ACS G + EG ++ H ++ + + +V++ + G EA + +
Sbjct: 286 FTSVLDACSKLGALTEGKEI-HKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDC 344
Query: 377 PMEPDSVIWSVLLGSCRKHGET--RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
++ + W+ L+ + + G++ RL + + P D + F + N SG ++
Sbjct: 345 GLK-NVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIP-DDVTFTAIFNACSHSGLPDE 402
Query: 435 ARLIRKEMK 443
L + M+
Sbjct: 403 GLLYFRAMR 411
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/589 (35%), Positives = 327/589 (55%), Gaps = 61/589 (10%)
Query: 8 YATLFHACALHGNIKQAMQLH-EHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+A + A A +++ +QLH + +++ LFV LI+MY + G++ AR +FD
Sbjct: 109 FAFIVKAAANLRSVRVGIQLHCQALVHGLDTH---LFVGTTLISMYGECGFVGFARKVFD 165
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVH 126
EMP+ N ++W A+++ + G+ + L F L V
Sbjct: 166 EMPEPNAIAWNAMVTACCRGGDMKGGREL------------FDLMPV------------- 200
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
++ N ++ Y+K+ E A ++F M ++ +SW++MI
Sbjct: 201 ---------RNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVG-------- 243
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
FA EEA FR+LQR+GM P+ + + VL ACA +H I K
Sbjct: 244 -----FAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKS 298
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDK-MTYHDLVSWNSILKAYALHGQAKEALQL 304
G + NAL+ Y++CG++ +++ VF++ M ++VSW S++ A A+HG +EA+ +
Sbjct: 299 GLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGI 358
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M ++PD F+SLL ACSHAGLV++G + F M + + P ++HY CMVDL G
Sbjct: 359 FHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYG 418
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G++ +A + + +MP+ ++IW LLG+C HG+ +LAE +L +L+P +S V
Sbjct: 419 RAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVL 478
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SN Y ++G + A +R+ M R+ K PG S IE++ ++ F +G K++ E +KK
Sbjct: 479 LSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKK 538
Query: 482 LEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
L+E+I +L+ GYVPE LHDIEEE KE + HSEKLA+ F I LC+ R+ I
Sbjct: 539 LKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGI---ARLCKGRT-I 594
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RI+KN+RIC DCH MKL S + EIVVRD +RFH FKD CSC DYW
Sbjct: 595 RIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH--AYARCGSISLSKQVFDKMTY 279
+L C L T + +H+ + K G E D IA L+H A + S+ + ++F
Sbjct: 11 LLNICKSLTTFKQ---IHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPN 67
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNK 335
D+ N++++ + +++L F M PDS +F ++ A ++ V+ G +
Sbjct: 68 PDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQ 127
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+ H HG+ L ++ + G G + A K+ EMP EP+++ W+ ++ +C +
Sbjct: 128 L-HCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMP-EPNAIAWNAMVTACCRG 185
Query: 396 GETR 399
G+ +
Sbjct: 186 GDMK 189
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/628 (34%), Positives = 326/628 (51%), Gaps = 69/628 (10%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A L CA + +A ++H + + QD V L YA G LD A L
Sbjct: 28 AALLAGCA---SASRAAEIHAAAVRASVD--QDKAVAFRLQRAYAASGRLDLAVALLRRT 82
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL---QYFFPNEFSLASVLISCDYLH-GKL 124
P V +T+ I ++ G L +L P +L++ L +C L G+
Sbjct: 83 PDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGCLAVGRA 142
Query: 125 VHALALKFSLDAHVYVANALINMYSK---------------------------SC----- 152
+H A+K +L YVA AL+ MY++ SC
Sbjct: 143 LHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMG 202
Query: 153 -ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D+A +F+ + ++++ WN+M ++ + + EAL LFRQ+ R G
Sbjct: 203 QLDDARGLFDALPRKDLVCWNAM-------------MDGYTQHGRPSEALRLFRQMLRSG 249
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED----DTVIANALIHAYARCGSI 267
+ PD + + L A A L T +HS +A G + + AL+ Y +CGS+
Sbjct: 250 VEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSL 309
Query: 268 SLSKQVFDKMTY---HDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLL 321
+ VF + D+V+WN+++ YA+HG+++EAL+ F + Q P TF+ +L
Sbjct: 310 EEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVL 369
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
+ACSH+GLV EG +F +M E +G+VP+++HY CMVDLLGR GR+ EA L++ M +PD
Sbjct: 370 NACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPD 429
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
+ +W+ LLG+CR H L + A L +S +V +SN+Y +G + + +R
Sbjct: 430 AAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSM 489
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
M+ S V+K PG S +E+ RV EF +G + HP+ I+ KLEE+ + G+VP T L
Sbjct: 490 MRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTELV 549
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
LHD+++ KE L HSEKLAL F +++ R+ I+I+KN+R C DCH +KL S+
Sbjct: 550 LHDLDDAAKERALAVHSEKLALAFGLIST----PPRTGIKIVKNLRACADCHAVLKLVSE 605
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
G++IV RD NRFHHF D CSC DYW
Sbjct: 606 ATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/589 (36%), Positives = 326/589 (55%), Gaps = 28/589 (4%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N Q+H +I + +HLI + +KF L A +F+ + + + L
Sbjct: 161 NFNTLKQIHTQIITT--GLSFQTYCLSHLIKISSKFN-LPYAFKIFNYISNPTIFLYNTL 217
Query: 80 ISGYAQHGNAEE---CFRLFCSLL--QYFFPNEFSLASVLISC----DYLH-GKLVHALA 129
IS N + F L+ +L + PN F+ S+ +C + H G L+H
Sbjct: 218 ISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHV 277
Query: 130 LKF-SLDAHVYVANALINMYSKS---CADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
LKF +V +L+N Y+K C +F+ + ++ +WN ++ A+
Sbjct: 278 LKFLQPPFDNFVQASLLNFYAKYGKMCVSRY--IFDRINEPDLATWNVILNAYARSSSYH 335
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
F E+L+LFR +Q G+ P+ T ++ AC+ L VH + +
Sbjct: 336 SYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRN 395
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS--WNSILKAYALHGQAKEALQ 303
+ + + A + Y++CG ++L+ QVFDKM +D S + +++ +A+HG +AL+
Sbjct: 396 KIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALE 455
Query: 304 LFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
L+ M + PDSATFV + ACSH GLV+EG ++F SM E HGV P+L+HY C++DLL
Sbjct: 456 LYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLL 515
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR GR+ EAE+ + +MPM+P++V+W LLG+ R HG + E+A TKL +LEP S +V
Sbjct: 516 GRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYV 575
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SN+Y G N + +RK MK V K PG S +EI+ +HEF +G + HP + I+
Sbjct: 576 LLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYL 635
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
K+ E+ +L+ G+ TS AL D+EEE KE L +HSE+LA+ FA++ S I
Sbjct: 636 KIAEINSRLEEYGHKARTSEALFDLEEEDKEGVLSYHSERLAIAFALIASPS----SLAI 691
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RI+KN+R+C DCH F KL S +EI+VRD NRFHHFKD CSC DYW
Sbjct: 692 RIIKNLRVCGDCHAFTKLISVAYHREIIVRDRNRFHHFKDGSCSCLDYW 740
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/536 (36%), Positives = 303/536 (56%), Gaps = 32/536 (5%)
Query: 69 PKRNVVSWTALISGYAQHGNAEE-CFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
P + + LI +AQ +++ R + ++ ++ PN+F+ VL +C + G
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD------EAWKVFENMEFRNVISWNSMIA 176
VHA +KF + +V N L++MY C D A KVF+ ++ ++W++MI
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIG 306
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ A+ N A+ LFR++Q G+ PD T VL ACA L
Sbjct: 307 GY-------------ARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGK 353
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+ S I + + NALI +A+CG + + +VF +M +VSW S++ A+HG
Sbjct: 354 WLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHG 413
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+ EA+ +F M V PD F+ +LSACSH+GLV +G+ F++M +VP+++HY
Sbjct: 414 RGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHY 473
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
CMVD+L R GR+ EA + +R MP+EP+ VIW ++ +C GE +L E A +L + EP
Sbjct: 474 GCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREP 533
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+V +SNIY + K +R+ M +RK PG + IE+ N ++EF +G K H
Sbjct: 534 SHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHD 593
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
Q + I++ +EE+ ++K GYVP TS L DI+EE KE+ LY HSEKLA+ FA+++
Sbjct: 594 QYKEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPP- 652
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI+KN+R+C DCH+ K S + +EIVVRD NRFHHFK+ +CSC D+W
Sbjct: 653 ---GTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G ++ L ++ N + + + N LI+M+AK G +D A +F EM
Sbjct: 338 SVLSACADLGALELGKWLESYIERK--NIMRSVELCNALIDMFAKCGDVDRAVKVFREMK 395
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV--- 125
R +VSWT++I G A HG E +F ++ Q P++ + VL +C H LV
Sbjct: 396 VRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACS--HSGLVDKG 453
Query: 126 ----HALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEF-------RNVISWNSM 174
+ + FS+ + +++M S+ A +V E +EF N + W S+
Sbjct: 454 HYYFNTMENMFSIVPKIEHYGCMVDMLSR-----AGRVNEALEFVRAMPVEPNQVIWRSI 508
Query: 175 IAAFRA---CKL-EAQAIELFAKMKNEEEALFLFRQL 207
+ A A KL E+ A EL + + E L +
Sbjct: 509 VTACHARGELKLGESVAKELIRREPSHESNYVLLSNI 545
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 326/557 (58%), Gaps = 32/557 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH----GNAEECFRLF 96
++ V+N L+ +YA+ GYL++ R +F MP+ + VSW ++I A A CF
Sbjct: 169 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNA 228
Query: 97 CSLLQYFFPNEFSLASVLISCDYLH--GKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
Q FS +S GK +H LALK+++ NALI Y K C
Sbjct: 229 LRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGK-CGE 287
Query: 154 -DEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D K+F M E R+ ++WNSMI+ + +L A+A++L F+ + QR
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDL---------VWFMLQTGQR-- 336
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
D ++ VL A A + T VH+ + E D V+ +AL+ Y++CG + +
Sbjct: 337 --LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYAL 394
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ----PDSATFVSLLSACSHA 327
+ F+ M + SWNS++ YA HGQ +EAL+LF+NM + PD TFV +LSACSHA
Sbjct: 395 RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHA 454
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GL++EG K F SM +++G+ P+++H++CM DLLGR G + + E I +MP++P+ +IW
Sbjct: 455 GLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRT 514
Query: 388 LLGSC-RKHG-ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
+LG+C R +G + L + AA L QLEP +++ +V + N+Y G + RK+MK +
Sbjct: 515 VLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 574
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K G SW+ +++ VH F +G K HP + I+KKL+EL +++ GYVP+T AL+D+
Sbjct: 575 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDL 634
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
E+E+KEE L +HSEKLA+ F + Q S IRIMKN+R+C DCH+ K S + G+
Sbjct: 635 EQENKEEILSYHSEKLAVAFVLAAQRS---STLPIRIMKNLRVCGDCHSAFKYISKIEGR 691
Query: 566 EIVVRDSNRFHHFKDRI 582
+I++RDSNR+ + +I
Sbjct: 692 QIILRDSNRYEDHQPQI 708
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 206/417 (49%), Gaps = 35/417 (8%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
+K+ ++H H+I + + + N L+NMYAK G + DAR +F M +++ VSW ++
Sbjct: 48 GLKKGREVHGHVITTGLVDFM-VGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSM 106
Query: 80 ISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSL 134
I+G Q+G E + S+ ++ P F+L S L SC L G+ +H +LK +
Sbjct: 107 ITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 166
Query: 135 DAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
D +V V+NAL+ +Y+++ +E K+F +M + +SWNS+I A L +
Sbjct: 167 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA------------LASS 214
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
++ EA+ F R G + TFS VL A + L +H L KY D+
Sbjct: 215 ERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATT 274
Query: 254 ANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
NALI Y +CG + +++F +M+ D V+WNS++ Y + +AL L M
Sbjct: 275 ENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTG 334
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKV----FHSMLENHGVVPQLDHYACMVDLLGRVGR 365
+ DS + ++LSA + ++ G +V + LE+ VV + +VD+ + GR
Sbjct: 335 QRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG-----SALVDMYSKCGR 389
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEPGDSLGFV 420
+ A + MP+ +S W+ ++ +H GE L A KL P D + FV
Sbjct: 390 LDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFV 445
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 26/293 (8%)
Query: 104 FPNEFSLASVLISCDYLHGKLVHALALKFSL-DAHVYVANALINMYSK--SCADEAWKVF 160
FP E+SLA + G+ VH + L D V + N L+NMY+K S AD A +VF
Sbjct: 38 FP-EYSLAEQV---GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD-ARRVF 92
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
M ++ +SWNSMI +A+E + M+ E + P T
Sbjct: 93 CFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHE-------------ILPGSFTLI 139
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
L +CA L + +H K G + + ++NAL+ YA G ++ +++F M H
Sbjct: 140 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 199
Query: 281 DLVSWNSILKAYALHGQA-KEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKV 336
D VSWNSI+ A A ++ EA+ F N + + TF S+LSA S + G ++
Sbjct: 200 DQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQI 259
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
H + + + + ++ G+ G + EK+ M D V W+ ++
Sbjct: 260 -HGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMI 311
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+YAT+ A A +++ M++H + D+ V + L++MY+K G LD A F+
Sbjct: 341 MYATVLSAFASVATLERGMEVHACSVRACLE--SDVVVGSALVDMYSKCGRLDYALRFFN 398
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCS--LLQYFFPNEFSLASVLISCDYLHGKL 124
MP RN SW ++ISGYA+HG EE +LF + L P+ + VL +C H L
Sbjct: 399 TMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACS--HAGL 456
Query: 125 V-------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMI 175
+ +++ + L + + + ++ ++ D+ + M + NV+ W +++
Sbjct: 457 LEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVL 516
Query: 176 AAFRACKLEAQAIELFAK 193
A C+ + EL K
Sbjct: 517 GA--CCRANGRKAELGKK 532
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 320/578 (55%), Gaps = 33/578 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
DLF+ N LIN Y G D A +F MP ++VVSW A+I+ +A G ++ LF +
Sbjct: 207 DLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEME 266
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
++ PN ++ SVL +C D G+ + + H+ + NA+++MY K C +
Sbjct: 267 MKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCIN 326
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRA--------CKLEAQA----------IELFAKMKN 196
+A +F M ++++SW +M+ C +A I + +
Sbjct: 327 DAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGK 386
Query: 197 EEEALFLFRQLQREGMA-PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
AL LF ++Q A PD T L A A L +H I K+ + +A
Sbjct: 387 PRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLAT 446
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
+L+ YA+CG+++ + +VF + D+ W++++ A A++GQ K AL LFS+M ++P
Sbjct: 447 SLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKP 506
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
++ TF ++L AC+HAGLV EG ++F M +G+VPQ+ HY C+VD+ GR G + +A
Sbjct: 507 NAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASF 566
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
I +MP+ P + +W LLG+C +HG LAELA L +LEP + FV +SNIY +G +
Sbjct: 567 IEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDW 626
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
K +RK M+ S V+K P S I++ VHEF G HP + I+ KL+E+ + K +
Sbjct: 627 EKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPI 686
Query: 493 GYVPETSLALHDIEEEHKEEQ-LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GY P+ S L EE++ EQ L HSEKLA+ F +++ S IRI+KNIRIC D
Sbjct: 687 GYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTAS----SQPIRIVKNIRICGD 742
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH F KL S L ++I++RD RFHHF+ CSC DYW
Sbjct: 743 CHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 227/472 (48%), Gaps = 68/472 (14%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSWT 77
N Q Q+H HM+ + D + + L+ YA L A+++F+++P+ N+ W
Sbjct: 84 NTMQLKQIHAHMLRT--SRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWN 141
Query: 78 ALISGYAQHGNAEECFRLFCSLLQYF--FPNEFSLASVLISCDYLH----GKLVHALALK 131
LI GYA + + F +F +L FPN+F+ + + L G ++H + +K
Sbjct: 142 TLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIK 201
Query: 132 FSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
SL + +++ N+LIN Y S A D A +VF NM ++V+SWN+MI AF L
Sbjct: 202 ASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGL------- 254
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
++AL LF++++ + + P+ T VL ACA + + S I GF +
Sbjct: 255 ------PDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEH 308
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-------------------------- 284
++ NA++ Y +CG I+ +K +F+KM+ D+VS
Sbjct: 309 LILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPH 368
Query: 285 -----WNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNK 335
WN+++ AY +G+ + AL LF M + +PD T + L A + G + G+
Sbjct: 369 KWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHW 428
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+ H ++ H + ++D+ + G + +A ++ + + D +WS ++G+ +
Sbjct: 429 I-HVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERK-DVYVWSAMIGALAMY 486
Query: 396 GETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCL---SGSFNKARLIRKEMK 443
G+ + A +L ++ L+ +++ F +NI C +G N+ + ++M+
Sbjct: 487 GQGKAALDLFSSMLEAYIKPNAVTF---TNILCACNHAGLVNEGEQLFEQME 535
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 162/363 (44%), Gaps = 61/363 (16%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA +++ + ++ NN E L + N +++MY K G ++DA+ LF++M
Sbjct: 279 SVLSACAKKIDLEFGRWICSYIENNGFTE--HLILNNAMLDMYVKCGCINDAKDLFNKMS 336
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSL------------------------LQYFF- 104
++++VSWT ++ G+A+ GN +E +F ++ L F
Sbjct: 337 EKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHE 396
Query: 105 --------PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
P+E +L L + L G +H K ++ + ++A +L++MY+K C
Sbjct: 397 MQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAK-C 455
Query: 153 A--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
++A +VF +E ++V W++MI A A + AL LF +
Sbjct: 456 GNLNKAMEVFHAVERKDVYVWSAMIGA-------------LAMYGQGKAALDLFSSMLEA 502
Query: 211 GMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ P+ TF+ +L AC AGLV E + YG ++ + R G +
Sbjct: 503 YIKPNAVTFTNILCACNHAGLVNEGE-QLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLE 561
Query: 269 LSKQVFDKMTYHDLVS-WNSILKAYALHGQAKEALQLFSN-MNVQP-DSATFVSLLSACS 325
+ +KM + W ++L A + HG + A + N + ++P + FV L + +
Sbjct: 562 KAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYA 621
Query: 326 HAG 328
AG
Sbjct: 622 KAG 624
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 209/615 (33%), Positives = 327/615 (53%), Gaps = 75/615 (12%)
Query: 46 NHLINMYAKFGYLDDARHLFDEM----PKRNVVSWTALISGYAQHGNAEECFRLFCSLL- 100
N ++ A+ G +DDA L M P+ NV +W ++SG ++HG E + S+L
Sbjct: 226 NAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK 285
Query: 101 QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
Q P+ +++S+L S HG +H L+ L+ VY AL++MY+K C D
Sbjct: 286 QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAK-CGRLD 344
Query: 155 EAWKVFENMEFRNVISWNSM-----------------------------------IAAFR 179
A KV + +E RN+ +WNS+ I +
Sbjct: 345 CAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYS 404
Query: 180 ACKLEAQAIELFAKMKNE----------------------EEALFLFRQLQREGMAPDWC 217
+QA+ L ++K E++ + ++Q++G+ P
Sbjct: 405 MNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLV 464
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T S++L+ACAGL ++ +H + ++ D V++ ALI Y++ GS+ +K +F+ +
Sbjct: 465 TMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESI 524
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+LV N++L A+HGQ +EA++LF +M ++PDS TF +LL+AC GLV EG
Sbjct: 525 QQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGW 584
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM +GV P ++YACMVDLL R G + EA I P++P + W LL C
Sbjct: 585 EYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSI 644
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG LAE+AA L LEP +S ++ M N+Y +++A ++ MK V PG S
Sbjct: 645 HGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWS 704
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
WI+IE +H F GK HP+ I+++L L+ Q+K GYVP+TS ++++EE KE+ L
Sbjct: 705 WIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLL 764
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
H+EKLA+ + ++ + R+ +R+MKN R+C DCH K S L ++I++RD+ R
Sbjct: 765 LGHTEKLAITYGLIRSDA---SRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVR 821
Query: 575 FHHFKDRICSCNDYW 589
FHHF D CSCNDYW
Sbjct: 822 FHHFVDGKCSCNDYW 836
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 211/483 (43%), Gaps = 51/483 (10%)
Query: 3 HSTQIYATLFHACA-LHGNI-------KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK 54
+S + +L CA LHG+ + A QLH + +D VT L+++ A+
Sbjct: 42 YSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRT--GLSRDPRVTCALVDLLAR 99
Query: 55 FGYLDDARHLFDEMPK---RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSL 110
G L E + ++ V W ++ A+ +E +F + P + ++
Sbjct: 100 LGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTC 159
Query: 111 ASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENME 164
A VL +C G+ VHA ALK +LDAH V L MY+++ AD A +V + M
Sbjct: 160 ARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAEN-ADVAAATRVLDAMG 218
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKN----------------------EEEALF 202
+V+ WN+++A L A+EL A+M + EAL
Sbjct: 219 AGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALG 278
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+ + ++G+ PD T S +LK+ A RH +H + E D AL+ YA
Sbjct: 279 VVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYA 338
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ---AKEALQLFSNMNVQPDSATFVS 319
+CG + +++V D + + +L +WNS++ YA G+ A E ++L + PD T+
Sbjct: 339 KCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNG 398
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP-- 377
L++ S G + + ++ GV P + + ++ G ++ EM
Sbjct: 399 LITGYSMNGQSSQAVLLLRQ-IKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKD 457
Query: 378 -MEPDSVIWSVLLGSCRKHG-ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
++P V SVLL +C + + EL L++ D + + ++Y GS A
Sbjct: 458 GVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSA 517
Query: 436 RLI 438
++I
Sbjct: 518 KVI 520
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/564 (35%), Positives = 327/564 (57%), Gaps = 29/564 (5%)
Query: 39 PQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
P D + + L++MY DAR FDE+P N V TA+ SG ++ +F S
Sbjct: 121 PSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRS 180
Query: 99 LL---QYFFPNEFSLASVLISCDYLHGKLV----HALALKFSLDAHVYVANALINMYSKS 151
++ +E + L + + + + HAL K LD VAN +I+ Y+K
Sbjct: 181 MVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKG 240
Query: 152 CADE---AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
+ A K+F+ M+ R+V+SWN+MIA + L +A+ L++KM L + ++
Sbjct: 241 GGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLYSKM------LIVGGDVR 293
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ T S VL ACA + +H+ + + G ED+ + +++ Y++CG +
Sbjct: 294 CNAV-----TLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVE 348
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
++ + F K+ +++SW++++ Y +HG +EAL +F++M ++P+ TF+++L+ACS
Sbjct: 349 MAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACS 408
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
HAGL+ EG +++M G+ P ++HY CMVDLLGR G + EA LI+EM ++PD+ +W
Sbjct: 409 HAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALW 468
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LL +CR + LA++ A +L +L+ +S +V +SNIY +G + + +R +K
Sbjct: 469 GALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTR 528
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
+ K PG S +E++ + H F G K HPQ + I+ LE+L+ ++ GYVP T LHD+
Sbjct: 529 GIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDL 588
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+ E +E L HSEKLA+ FA+MN + SVI ++KN+R+C DCH +K+ + L G+
Sbjct: 589 DVEERESMLRIHSEKLAVAFALMNS----VQGSVIHVIKNLRVCTDCHAAIKIITKLTGR 644
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI++RD RFHHFKD +CSC DYW
Sbjct: 645 EIIIRDLKRFHHFKDGLCSCGDYW 668
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/615 (33%), Positives = 327/615 (53%), Gaps = 75/615 (12%)
Query: 46 NHLINMYAKFGYLDDARHLFDEM----PKRNVVSWTALISGYAQHGNAEECFRLFCSLL- 100
N ++ A+ G +DDA L M P+ NV +W ++SG ++HG E + S+L
Sbjct: 226 NAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK 285
Query: 101 QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
Q P+ +++S+L S HG +H L+ L+ VY AL++MY+K C D
Sbjct: 286 QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAK-CGRLD 344
Query: 155 EAWKVFENMEFRNVISWNSM-----------------------------------IAAFR 179
A KV + +E RN+ +WNS+ I +
Sbjct: 345 CAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYS 404
Query: 180 ACKLEAQAIELFAKMKNE----------------------EEALFLFRQLQREGMAPDWC 217
+QA+ L ++K E++ + ++Q++G+ P
Sbjct: 405 MNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLV 464
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T S++L+ACAGL ++ +H + ++ D V++ ALI Y++ GS+ +K +F+ +
Sbjct: 465 TMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESI 524
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
+LV N++L A+HGQ +EA++LF +M ++PDS TF +LL+AC GLV EG
Sbjct: 525 QQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGW 584
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ F SM +GV P ++YACMVDLL R G + EA I P++P + W LL C
Sbjct: 585 EYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSI 644
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG LAE+AA L LEP +S ++ M N+Y +++A ++ MK V PG S
Sbjct: 645 HGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWS 704
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
WI+IE +H F GK HP+ I+++L L+ Q+K GYVP+TS ++++EE KE+ L
Sbjct: 705 WIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLL 764
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
H+EKLA+ + ++ + R+ +R+MKN R+C DCH K S L ++I++RD+ R
Sbjct: 765 LGHTEKLAITYGLIRSDA---SRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVR 821
Query: 575 FHHFKDRICSCNDYW 589
FHHF D CSCNDYW
Sbjct: 822 FHHFVDGKCSCNDYW 836
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 211/483 (43%), Gaps = 51/483 (10%)
Query: 3 HSTQIYATLFHACA-LHGNI-------KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK 54
+S + +L CA LHG+ + A QLH + +D VT L+++ A+
Sbjct: 42 YSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRT--GLSRDPRVTCALVDLLAR 99
Query: 55 FGYLDDARHLFDEMPK---RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSL 110
G L E + ++ V W ++ A+ +E +F + P + ++
Sbjct: 100 LGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTC 159
Query: 111 ASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENME 164
A VL +C G+ VHA ALK +LDAH V L MY+++ AD A +V + M
Sbjct: 160 ARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAEN-ADVAAATRVLDAMG 218
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKN----------------------EEEALF 202
+V+ WN+++A L A+EL A+M + EAL
Sbjct: 219 AGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALG 278
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+ + ++G+ PD T S +LK+ A RH +H + E D AL+ YA
Sbjct: 279 VVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYA 338
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ---AKEALQLFSNMNVQPDSATFVS 319
+CG + +++V D + + +L +WNS++ YA G+ A E ++L + PD T+
Sbjct: 339 KCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNG 398
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP-- 377
L++ S G + + ++ GV P + + ++ G ++ EM
Sbjct: 399 LITGYSMNGQSSQAVLLLRQ-IKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKD 457
Query: 378 -MEPDSVIWSVLLGSCRKHG-ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
++P V SVLL +C + + EL L++ D + + ++Y GS A
Sbjct: 458 GVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSA 517
Query: 436 RLI 438
++I
Sbjct: 518 KVI 520
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/548 (37%), Positives = 314/548 (57%), Gaps = 31/548 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ N L++ Y ++G + +AR LFD MP R+VVSW ++SGYA+ G+ E RLF +
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251
Query: 101 QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMY-SKSCADEAWK 158
+ F+ +V +S +G L A + ++ V+ NA++ Y + DEA +
Sbjct: 252 ---VRDVFTWTAV-VSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKE 307
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEA 200
+F M RNV SWN+M+ + + +A +F M + EE
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LF ++ R G + F+ VL CA + +H + + G+ + NAL+
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
Y +CG++ ++ F++M D+VSWN+++ YA HG KEAL++F M + +PD T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
V +L+ACSH+GLV++G F+SM + GV + +HY CM+DLLGR GR+ EA L+++MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
EPDS +W LLG+ R H L AA K+ +LEP ++ +V +SNIY SG + AR
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607
Query: 438 IRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPE 497
+R M+ V+K PG SWIE++N+VH F++G HP++E I+ LE+L ++K GYV
Sbjct: 608 MRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSA 667
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T + LHD+EEE KE L +HSEKLA+ + I+N IR++KN+R+C DCHN K
Sbjct: 668 TDMVLHDVEEEEKEHMLKYHSEKLAVAYGILN----IPPGRPIRVIKNLRVCGDCHNAFK 723
Query: 558 LASDLLGK 565
+L+ K
Sbjct: 724 AWIELMLK 731
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 65/393 (16%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
EP+ + +N I + + G + DA LF MP+R+ ++ A+++GY+ +G LF
Sbjct: 35 EPE-VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 98 SLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAW 157
++ + P+ +S + L+HALA+ S S AD A
Sbjct: 94 AIPR---PDNYS-----------YNTLLHALAV------------------SSSLAD-AR 120
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F+ M R+ +++N MI++ L + A F + E++A + GM +
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF-DLAPEKDA------VSWNGMLAAYV 173
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
V +A GL R E D + NAL+ Y + G +S ++++FD+M
Sbjct: 174 RNGRVEEA-RGLFNSRT-------------EWDVISWNALMSGYVQWGKMSEARELFDRM 219
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
D+VSWN ++ YA G EA +LF V+ D T+ +++S + G+++E +VF
Sbjct: 220 PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR-DVFTWTAVVSGYAQNGMLEEARRVF 278
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+M E + V + MV + + EA++L MP + W+ +L + G
Sbjct: 279 DAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTGYAQAG- 331
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+ E A + D++ + M Y G
Sbjct: 332 --MLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 217/626 (34%), Positives = 338/626 (53%), Gaps = 53/626 (8%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYA--KFGYLDDAR 62
++ +LF C+ ++ QLH + N P FV++ L+ +Y+ K L AR
Sbjct: 17 NLHLSLFQTCSAP---QEVEQLHAFSLKTAIFNHP---FVSSRLLALYSDPKINDLGYAR 70
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL-- 120
+FD + +R+++ W +I Y ++ + + LF L+ + P+ F+L V+ C L
Sbjct: 71 SIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGV 130
Query: 121 --HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFR---------- 166
GK +H LALK + V+V +L+NMYSK C D A KVF+ M +
Sbjct: 131 VQEGKQIHGLALKIGFGSDVFVQGSLVNMYSK-CGEIDCARKVFDGMIDKDVVLWNSLID 189
Query: 167 -NVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQL 207
N++SWN+MI + A+ELF +M + +A+ +F +
Sbjct: 190 GNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMM 249
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ G P T VL A +GL +HS + K GFE D ++ +LI YA+CG I
Sbjct: 250 LKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCI 309
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ VF + + W +I+ +HG A AL LF M ++P++ F+ +L+AC
Sbjct: 310 ESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNAC 369
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+HAGLV +G + F M+ + + P L+HY C+VD+L R G + EA+ I MP+ P+ VI
Sbjct: 370 NHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVI 429
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LLG R HG+ + E AA ++ ++ P ++ +SN+Y SG + K +R+ M
Sbjct: 430 WMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYK 489
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
RK PG S +E + +HEF G HPQ + I+ K+ E+ +LK +G+VP+T+ L
Sbjct: 490 RGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLC 549
Query: 505 IE-EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
IE E+ KE +L +HSE+LA+ F ++N + IRIMKN+R+C DCH+ KL S +
Sbjct: 550 IEGEKEKEAELENHSERLAIAFGLIN----VKPGIPIRIMKNLRVCNDCHSVTKLLSKIY 605
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD+ RFHHFK+ CSC DYW
Sbjct: 606 SREIIVRDNCRFHHFKNGSCSCMDYW 631
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/535 (37%), Positives = 304/535 (56%), Gaps = 33/535 (6%)
Query: 69 PKRNVVSWTALISGYAQHGNAEE-CFRLFCSLLQY-FFPNEFSLASVLISCDYLH----G 122
P + + LI Y+Q +++ F + ++L+Y PN+F+ VL C + G
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-----AWKVFENMEFRNVISWNSMIAA 177
K VH +KF + V+V N LI+MY C E A KVF++ + ++W++MIA
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMYC--CLGEDGFEFAEKVFDDSPKMDTVTWSAMIAG 202
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F ++A++LF R++Q G+ PD T VL ACA L
Sbjct: 203 FVRLGCSSRAVDLF-------------REMQVMGVCPDEITMVSVLSACADLGALELGKW 249
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
V S + K + NALI +A+CG++ + ++F +M +VSW S++ A+HG+
Sbjct: 250 VESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGR 309
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+A+ LF M + PD F+ +LSACSH+GLV +G F SM N +VP+++HY
Sbjct: 310 GLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYG 369
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLL R G + EA + +++MP EP+ +IW ++ +C GE +L E + +L + EP
Sbjct: 370 CMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPM 429
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+V +SNIY + K +R+ M ++K PG + IE+ N ++EF +G K H Q
Sbjct: 430 HESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQ 489
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I++ ++E+ ++K GYVP TS L DI+EE KE+ LY HSEKLA+ FA++N
Sbjct: 490 YKEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPP-- 547
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI+KN+R+C DCH+ K S + +EIVVRD NRFHHFK+ +CSC D+W
Sbjct: 548 --GTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ ACA G ++ + ++ N P+ + + N LI+M+AK G +D A LF +M
Sbjct: 232 VSVLSACADLGALELGKWVESYVEKK--NIPKSVELCNALIDMFAKCGNVDKAIKLFRQM 289
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVH- 126
R +VSWT++I+G A HG + LF +++ P++ + VL +C H LV
Sbjct: 290 DSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACS--HSGLVDK 347
Query: 127 ------ALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFR-NVISWNSMIAAF 178
++ FS+ V ++++ + EA++ + M F N I W ++I A
Sbjct: 348 GRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITAC 407
Query: 179 RA 180
A
Sbjct: 408 HA 409
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 207/598 (34%), Positives = 325/598 (54%), Gaps = 41/598 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ T+ H G + +A E N P +D+ N ++N Y G ++DA LF +
Sbjct: 155 WTTIIHGFLSTGRVNEA----ERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQ 210
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC---------D 118
MP R+V+SWT++I G ++G + + F +++ + + ++S + C D
Sbjct: 211 MPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGF---SGVGISSTTLVCGLSAAAKILD 267
Query: 119 YLHGKLVHALALKFSLDAHV--YVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSM 174
+ G +H KF + +V+ +L+ Y+ SC +A KVF +NV+ W ++
Sbjct: 268 FYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYA-SCKRMGDACKVFGETVCKNVVVWTAL 326
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ C L + +E AL +F ++ R + P+ +F+ L +C GL
Sbjct: 327 LTG---CGLNDKHVE----------ALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEK 373
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ K G E+ N+L+ Y++CG I + VF + ++VSWNS++ A
Sbjct: 374 GRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQ 433
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG AL LF M V+ D T LLSACS +G++Q+ F + ++
Sbjct: 434 HGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVE 493
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYACMVD+LGR G + EAE L MP+E +S++W VLL +CR H +AE AA ++ ++
Sbjct: 494 HYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEM 553
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP S +V +SN+Y S + + IR +MK + + K PG SWI ++ HEF S +
Sbjct: 554 EPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRS 613
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP E I++KL L +L+ +GY+P+ ALHD+E E EE L +HSE+LA+ F +++
Sbjct: 614 HPLTEEIYEKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLST- 672
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E S I IMKN+R+C DCH + L + ++ +EIVVRDS+RFHHFK+ ICSC DYW
Sbjct: 673 ---VEGSTITIMKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 727
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 166 RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
++ ISWNS+I A C A++LF +M QR ++ W T
Sbjct: 119 KDTISWNSVIKASIICNDFVTAVKLFDEMP------------QRNSIS--WTTI-----I 159
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
L T R A A + D NA+++ Y G ++ + ++F +M D++SW
Sbjct: 160 HGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISW 219
Query: 286 NSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
SI+ +G++ +AL F NM V S T V LSA + G ++ H +
Sbjct: 220 TSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQI-HCCM 278
Query: 342 ENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G LD + A +V R+ +A K+ E + + V+W+ LL C
Sbjct: 279 FKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCK-NVVVWTALLTGC 330
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/498 (37%), Positives = 296/498 (59%), Gaps = 25/498 (5%)
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
L+ + + SV+ +C D G+L+H + + + LINMYS+ D
Sbjct: 3 LEGLRGDRSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDVPD 62
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A +VF+ M ++V+ W +MIAA + Q +E AL LF+++ EG+
Sbjct: 63 KAIEVFDAMHNKSVVVWTAMIAAHSQ---QGQGLE----------ALELFKRMDIEGVRA 109
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D FS+VL CA L A +H+ +A E D V+ N L++ Y +CG ++ ++QVF
Sbjct: 110 DKVAFSLVLDVCANLAALAQARILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVF 169
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLVQ 331
+KM D+VSW SI+ AYA G A A +LF M D+ FV ++S C+HAGL++
Sbjct: 170 EKMASKDMVSWTSIIAAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLK 229
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+ F SML+++G+ P ++YAC++DLLGR+G++ + E L+ M +EPD + W L +
Sbjct: 230 DARNWFVSMLQDYGLSPVNENYACILDLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNA 289
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ H + + AA +L QL +S +V +S+I+ + G F+ A +R+ + +K P
Sbjct: 290 CKVHKDMKRGVRAAQRLVQLNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVP 349
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
GLSWIEI+++VH+FASG + HP+ + IF +L+ L ++ GYVP+T + L D+EEE KE
Sbjct: 350 GLSWIEIKDKVHKFASGSRTHPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKE 409
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L +HSEK A+ F +++ S + +R++KN+R+C DCH K S + G++I VRD
Sbjct: 410 QVLCYHSEKQAMAFGLISTPS----GTPLRVVKNLRVCTDCHTATKFISKITGRQITVRD 465
Query: 572 SNRFHHFKDRICSCNDYW 589
+NRFH FKD CSC DYW
Sbjct: 466 ANRFHEFKDGFCSCKDYW 483
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 153/326 (46%), Gaps = 31/326 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ ACA ++ LH MI E + TN LINMY++ D A +FD
Sbjct: 13 FTSVIEACACLPDLTLGQLLHYRMIT-LGCELDTVLGTN-LINMYSRCDVPDKAIEVFDA 70
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HG 122
M ++VV WTA+I+ ++Q G E LF + ++ ++ + + VL C L
Sbjct: 71 MHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANLAALAQA 130
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+++HA L+ + V N L+NMY K C +EA +VFE M ++++SW S+IAA
Sbjct: 131 RILHATVAGTELEQDMVVKNTLVNMYGK-CGKLNEARQVFEKMASKDMVSWTSIIAA--- 186
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAV 238
+A+ + A LF +Q+ G A D F V+ C AGL+ + V
Sbjct: 187 ----------YAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFV 236
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQ 297
S++ YG ++ R G + + + + MT D ++W S L A +H
Sbjct: 237 -SMLQDYGLSPVNENYACILDLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNACKVHKD 295
Query: 298 AK---EALQLFSNMNVQPDSATFVSL 320
K A Q +N + +SA++V L
Sbjct: 296 MKRGVRAAQRLVQLN-RRNSASYVLL 320
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 117/235 (49%), Gaps = 8/235 (3%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
++ EG+ D TF+ V++ACA L +H + G E DTV+ LI+ Y+RC
Sbjct: 1 MELEGLRGDRSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDV 60
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSA 323
+ +VFD M +V W +++ A++ GQ EAL+LF M+ V+ D F +L
Sbjct: 61 PDKAIEVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDV 120
Query: 324 CSH-AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
C++ A L Q ++ H+ + + + +V++ G+ G++ EA ++ +M D
Sbjct: 121 CANLAALAQA--RILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMA-SKDM 177
Query: 383 VIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
V W+ ++ + + G A EL + E D++ FV++ + +G AR
Sbjct: 178 VSWTSIIAAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDAR 232
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 222/614 (36%), Positives = 333/614 (54%), Gaps = 49/614 (7%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
H +I+ +L C+ ++ Q QLH + +P EP LF+ ++ + + F ++ A
Sbjct: 104 HHQRIF-SLAETCS---DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYA 159
Query: 62 RHLFDEMPKRNVVSWTALISGYAQH-GNAEECFRLFCSLLQY--FFPNEFSLASVLISCD 118
+FD + + W LI A EE F L+ +L+ P++ + VL +C
Sbjct: 160 FRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACA 219
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNS 173
Y+ GK VH +K VYV N LI++Y S C D A KVF+ M R+++SWNS
Sbjct: 220 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 279
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI A + + AL LFR++QR PD T VL ACAGL +
Sbjct: 280 MIDAL-------------VRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLS 325
Query: 234 HASAVHSLIAKYGFED---DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+ H+ + + D D ++ N+LI Y +CGS+ +++QVF M DL SWN+++
Sbjct: 326 LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMIL 385
Query: 291 AYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+A HG+A+EA+ F M NV+P+S TFV LL AC+H G V +G + F M+ ++
Sbjct: 386 GFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYC 445
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET-RLAELA 404
+ P L+HY C+VDL+ R G I EA ++ MPM+PD+VIW LL +C K G + L+E
Sbjct: 446 IEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEI 505
Query: 405 ATKL------KQLEPGDSLG-FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
A + + G+ G +V +S +Y + +N ++RK M +RK PG S IE
Sbjct: 506 ARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIE 565
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA--LHDIEEEHKEEQLY 515
I HEF +G HPQ + I+++L+ + +L+ +GY+P+ S A + + KE L
Sbjct: 566 INGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLR 625
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HSE+LA+ F ++N ++ IRI KN+R+C DCH KL S + EI+VRD RF
Sbjct: 626 LHSERLAIAFGLIN----LPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRF 681
Query: 576 HHFKDRICSCNDYW 589
HHFKD CSC DYW
Sbjct: 682 HHFKDGSCSCLDYW 695
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/565 (36%), Positives = 318/565 (56%), Gaps = 35/565 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNA------EECFR 94
DLF+ + +++MYAK G L +A LF + NVV + A+I+G + A E
Sbjct: 251 DLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALS 310
Query: 95 LFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMY- 148
L+ L P EF+ +SV+ +C D GK +H LK ++ +ALI++Y
Sbjct: 311 LYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYF 370
Query: 149 SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
+ +C ++ ++ F ++ ++V++W +MI+ ELF E AL LF +L
Sbjct: 371 NSACMEDGFRCFRSVPKQDVVTWTAMISG-------CVQNELF------ERALALFHELL 417
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G+ PD T S V+ ACA L R + K GF+ T + N+ IH YAR G++
Sbjct: 418 GVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVE 477
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
+ Q F +M HD+VSW++I+ ++A HG A++ALQ F+ M V P+ TF+ +L+ACS
Sbjct: 478 AAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACS 537
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H GLV EG + + M +G+ P + H C+VDLLGR GR+ +AE IR+ + V+W
Sbjct: 538 HGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVW 597
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLGSCR H + +L A ++ +L+P S +V + N+Y +G + IR MK
Sbjct: 598 QSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKER 657
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K PGLSWIE+ + +H F +G K HP+ AI+ KL E++ ++ + + + +
Sbjct: 658 GVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDKLTTTDTSCIEW--V 715
Query: 506 EEEHKEEQLYH-HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
E +E+ + HSEKLA+ I++ + + IR+MKN+R+C DCH+ MKL S
Sbjct: 716 ETTGREQNWMNCHSEKLAVALGIIHL----PQSAPIRVMKNLRVCRDCHSTMKLISKSEC 771
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI++RD RFHHF+D CSC DYW
Sbjct: 772 REIILRDVIRFHHFRDGSCSCGDYW 796
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 202/409 (49%), Gaps = 30/409 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA AC+ G +K+ +H + + +FV+N L++MYA+ G + +AR +FD
Sbjct: 117 YAAALAACSRAGRLKEGKVVHALAV--LEGLAEGVFVSNSLVSMYARCGDMGEARRVFDV 174
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHGKL-- 124
+R+ VSW +L+SGY + G EE R+F + + N F+L SV+ C G +
Sbjct: 175 TEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRG 234
Query: 125 ----VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
VH +K LD +++A+A+++MY+K A EA +F+++ NV+ +N+MIA
Sbjct: 235 IAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGL- 293
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C+ EA + + EAL L+ +LQ GM P TFS V++AC +H
Sbjct: 294 -CRDEAAVHKEVVR-----EALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIH 347
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K+ F+ D I +ALI Y + + F + D+V+W +++ + +
Sbjct: 348 GQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFE 407
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
AL LF + ++PD T S+++AC+ +V+ G + ++ D + M
Sbjct: 408 RALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQ-----MQCFATKSGFDRFTAM 462
Query: 357 ----VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + R G + A + +EM D V WS ++ S +HG R A
Sbjct: 463 GNSCIHMYARSGNVEAAIQRFQEMESH-DVVSWSAIISSHAQHGCARQA 510
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 208/415 (50%), Gaps = 53/415 (12%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLD- 59
+LH + A+L A A+HG+I +A + LF+ N L+ Y + G D
Sbjct: 16 YLHHLRSCASLPQAAAVHGHIARA------------HPSPSLFLRNTLLAAYCRLGAGDT 63
Query: 60 -DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--CSLLQYFFPNEFSLASVLIS 116
AR L DEMP+RN VS+ LI Y++ G EE F + F+ A+ L +
Sbjct: 64 HQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAA 123
Query: 117 CDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVIS 170
C GK+VHALA+ L V+V+N+L++MY++ C D EA +VF+ E R+ +S
Sbjct: 124 CSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYAR-CGDMGEARRVFDVTEERDDVS 182
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG-- 228
WNS+++ + ++ EE L +F ++R M + V+K C+G
Sbjct: 183 WNSLVSG-------------YLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGD 229
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
A AVH + K G + D +A+A++ YA+ G++S + +F + ++V +N++
Sbjct: 230 GSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAM 289
Query: 289 LKAY-----ALHGQ-AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+ A+H + +EAL L+S + ++P TF S++ AC+ AG ++ G ++
Sbjct: 290 IAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQ 349
Query: 340 MLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+L++ Q D + + ++DL + + + R +P + D V W+ ++ C
Sbjct: 350 VLKH---CFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQ-DVVTWTAMISGC 400
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 23/265 (8%)
Query: 138 VYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
+++ N L+ Y + A + A ++ + M RN +S+N +I A+ ++
Sbjct: 45 LFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAY-------------SRA 91
Query: 195 KNEEEALFLFRQLQREG-MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
EE+L F R + D T++ L AC+ + VH+L G + +
Sbjct: 92 GQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFV 151
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---V 310
+N+L+ YARCG + +++VFD D VSWNS++ Y G +E L++F+ M +
Sbjct: 152 SNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAM 211
Query: 311 QPDSATFVSLLSACSHA-GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+S S++ CS G V+ + H + G+ L + MVD+ + G + EA
Sbjct: 212 GLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEA 271
Query: 370 EKLIREMPMEPDSVIWSVLL-GSCR 393
L + + ++P+ V+++ ++ G CR
Sbjct: 272 VALFKSV-LDPNVVVFNAMIAGLCR 295
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/602 (34%), Positives = 329/602 (54%), Gaps = 42/602 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
++ +Y +L +C ++ Q+H H+I N ++ V + NMY + G+L+ A+
Sbjct: 187 NSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLN--ANITVETAICNMYVRCGWLEGAKL 244
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----D 118
+FD M +N V+WT L+ GY Q E LF + ++ +EF + VL C D
Sbjct: 245 VFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLED 304
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIA 176
+ G+ +H+ +K ++ V V L++ Y K C D A++ F + N +SW+++I+
Sbjct: 305 WDMGRQIHSHIVKLGAESEVSVGTPLVDFYVK-CGDIESAYRSFGRISEPNDVSWSALIS 363
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
F +Q+ L E+ + +F L+ EG+ + ++ V +ACA S
Sbjct: 364 GF------SQSGRL-------EDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGS 410
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
H K G +A++ Y++CG + +++ F+ + D V+W +I+ YA HG
Sbjct: 411 QAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHG 470
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
A EAL F M V+P++ TF+++L+ACSH+GLV E + SM ++GV P +DHY
Sbjct: 471 NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY 530
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
CM+D R G + EA +LI MP EPD++ W LLG C H + +L ++AA L +L+P
Sbjct: 531 DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDP 590
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
GD+ G++ + N+Y G + +A +RK M ++K SWI ++ +VH F G + HP
Sbjct: 591 GDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHP 650
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE------HKEEQLYHHSEKLALVFAI 527
Q EAI+ KLEE V ++ + L + E++ ++EQL HSEKLA+ F +
Sbjct: 651 QTEAIYSKLEEFKCS------VIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGL 704
Query: 528 MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCND 587
++ + + I + KN+R C DCH F K S + G++IVVRDS RFHHFK CSCND
Sbjct: 705 IST----EDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCND 760
Query: 588 YW 589
YW
Sbjct: 761 YW 762
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 194/398 (48%), Gaps = 26/398 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y LF AC ++ +H+ + N + N L+ MY G D + +FDE
Sbjct: 90 YQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS--IENCLLRMYCDCGSCIDVQKVFDE 147
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC---DYLH-G 122
M +N+VSW +IS YA++G E+ RLF + PN S+L SC +L G
Sbjct: 148 MLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELG 207
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAWK-VFENMEFRNVISWNSMIAAFRAC 181
K +H+ ++ L+A++ V A+ NMY + E K VF+ M+ +N ++W ++ +
Sbjct: 208 KQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
K A+ELFA+M EG+ D FSIVLK C GL +HS
Sbjct: 268 KKLEVALELFARMA-------------MEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSH 314
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K G E + + L+ Y +CG I + + F +++ + VSW++++ ++ G+ ++
Sbjct: 315 IVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDC 374
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+++F+++ V +S + S+ AC+ + G++ H G+V L + MV
Sbjct: 375 IKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQA-HGDAIKRGLVSYLYGESAMVT 433
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ + GR+ A + + EPD+V W+ ++ HG
Sbjct: 434 MYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHG 470
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 5/211 (2%)
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
KLE + +K +EA +++ ++ ++ + +AC L + +H
Sbjct: 53 KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + I N L+ Y CGS ++VFD+M +LVSW ++ AYA +G+ ++A
Sbjct: 113 LRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA 172
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LFS+M ++P+SA ++SLL +C ++ G ++ HS + + + + +
Sbjct: 173 IRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQI-HSHVIRAQLNANITVETAICN 231
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ R G LE KL+ + ++V W+ L+
Sbjct: 232 MYVRCG-WLEGAKLVFDGMDAQNAVTWTGLM 261
>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
Length = 739
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 215/592 (36%), Positives = 330/592 (55%), Gaps = 60/592 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ + N L+NMY+K G L +AR F EM R+VVSWT +I+ ++HG E +F +
Sbjct: 166 KDVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEM 225
Query: 100 L-QYFFPNEFSLASVLISC----DYLHGKLVHAL--ALKFSLDAHVYVANALINMYSK-S 151
+ + PNE S +VL +C D +++H + LD + VAN LI+ Y +
Sbjct: 226 VSENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCG 285
Query: 152 CADEAWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
+A +VF++++ RN +SW SMIAA+ + + +EL+ +M EE+
Sbjct: 286 SPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREES--------- 336
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ M P + VL+AC+ L + VH I GF D+ +A A+++ Y +CGS+
Sbjct: 337 KKMDP--VAYLCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVE 394
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+++VFD M ++++WNS++ Y HG K ALQLF V PD TFV++L+ACSH
Sbjct: 395 AREVFDGMKARNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSH 454
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM----EPDS 382
AG+V+ G F S+ + G+ P +DHY CMVD+LGR G + AE+L+ MP +
Sbjct: 455 AGMVKPGVWHFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEF 514
Query: 383 VIWSVLLGSCRKHGET-RLAELAATKLKQLE---------------PGDSLGFVQMSNIY 426
V W LL SC+ H + R A +++ + + + V +SNIY
Sbjct: 515 VPWMALLASCKVHTDVKRAARISSVLSAKKKKLLSSSSSGSGSWHLKNSAAPLVMLSNIY 574
Query: 427 CLSGSFNKARLIRKEM-----KGSRVRKYPGLSWIEIENRVHEFASGGKR-HPQREAI-- 478
+ + + +R E+ KG + G S+IE+E +HEF +G HP+ + I
Sbjct: 575 AQAKKWEEMTGVRNEITEEWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDS 634
Query: 479 -FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
K+LEELI K GYVP+TS+ +HD+EE KE L+ HSE++A+ F +M GS
Sbjct: 635 EMKRLEELI---KSAGYVPDTSVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGS----D 687
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+++R++ N+RIC DCH +KL S +G+EI+VRD+ RFHHF CSC DYW
Sbjct: 688 TIVRVVNNLRICSDCHAAVKLISKTVGREILVRDTRRFHHFASGECSCQDYW 739
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 199/392 (50%), Gaps = 36/392 (9%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
+LH MI + D ++ N+L+ +Y KFG LD A FD + +NV SWT +IS +AQ
Sbjct: 55 ELHCRMIAQGLD--ADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQ 112
Query: 86 HGNAEECFRLFCSL-LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYV 140
+G+ E LF + + NE +LA+VL C D G+ +H + D V +
Sbjct: 113 NGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKKD--VVI 170
Query: 141 ANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
NAL+NMYSK C EA F+ M R+V+SW +MI A +A+E+F +M +E
Sbjct: 171 GNALVNMYSK-CGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSEN 229
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT--VIANA 256
+AP+ + VL AC+ L +H IA G E D V+AN
Sbjct: 230 -------------VAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANT 276
Query: 257 LIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYALHGQAKEALQLFSNM-----N 309
LIH Y RCGS S +++VFD + + + VSW S++ AY + QAK ++L+ M +
Sbjct: 277 LIHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREES 336
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ D ++ +L ACS ++ G +V H + G +L +V++ + G ++EA
Sbjct: 337 KKMDPVAYLCVLEACSSLSALKVGRQV-HEEIVAAGFGDELPLAGAIVNMYCKCGSLVEA 395
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
++ M + + W+ ++G +HG + A
Sbjct: 396 REVFDGMKAR-NMIAWNSMMGGYTQHGHPKRA 426
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 32/297 (10%)
Query: 104 FPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFEN 162
F E A L + + LH +++ LDA Y+ N L+ +Y K D AW F+
Sbjct: 40 FARELRNARCLAAVEELHCRMIAQ-----GLDADTYLGNNLVRVYGKFGGLDRAWAAFDR 94
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV 222
+ +NV SW +I+A FA+ + EAL LFRQ++REG+ + T + V
Sbjct: 95 IAAKNVFSWTIVISA-------------FAQNGHHREALVLFRQMEREGVKANEVTLAAV 141
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L C+ + ++H + + D VI NAL++ Y++CGS+ ++ F +M D+
Sbjct: 142 LGICSSIKDLAGGRSIHGRV--IAAKKDVVIGNALVNMYSKCGSLREARASFQEMVVRDV 199
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
VSW +++ A + HG+ EA+++F M NV P+ + +++L ACS+ G + +V H
Sbjct: 200 VSWTTMITALSEHGEWNEAVEIFWEMVSENVAPNEISCLAVLGACSNLGDRSQ-VRVIHE 258
Query: 340 MLENHGVVPQLDHYACMVDLL----GRVGRILEAEKLIREMPMEP-DSVIWSVLLGS 391
+ + G+ +LD + + L GR G +A ++ + ++V W+ ++ +
Sbjct: 259 FIASGGL--ELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAA 313
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 144/315 (45%), Gaps = 33/315 (10%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM- 68
+ AC+ G+ Q +HE + + + L V N LI+ Y + G DAR +FD +
Sbjct: 239 AVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQ 298
Query: 69 -PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLAS---VLISCDYLH--- 121
RN VSW ++I+ Y + A+ L+ ++Q + + VL +C L
Sbjct: 299 HSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSLSALK 358
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
G+ VH + + +A A++NMY K C EA +VF+ M+ RN+I+WNSM+
Sbjct: 359 VGRQVHEEIVAAGFGDELPLAGAIVNMYCK-CGSLVEAREVFDGMKARNMIAWNSMMGG- 416
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHAS 236
+ + + + AL LF +G+ PD TF +L AC AG+V +
Sbjct: 417 ------------YTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMV-KPGVW 463
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-----TYHDLVSWNSILKA 291
S+ A +G E ++ R G + ++++ ++M + V W ++L +
Sbjct: 464 HFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLAS 523
Query: 292 YALHGQAKEALQLFS 306
+H K A ++ S
Sbjct: 524 CKVHTDVKRAARISS 538
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
Y + AC+ +K Q+HE ++ F +E L + ++NMY K G L +AR +FD
Sbjct: 344 YLCVLEACSSLSALKVGRQVHEEIVAAGFGDE---LPLAGAIVNMYCKCGSLVEAREVFD 400
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDY 119
M RN+++W +++ GY QHG+ + +LF + L P+E + ++L +C +
Sbjct: 401 GMKARNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSH 454
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 222/623 (35%), Positives = 345/623 (55%), Gaps = 68/623 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ C GN +A+ L N P +++ ++ YAK G L+ AR FDE
Sbjct: 164 WNSMISGCWKSGNETEAVVL----FNMMP--ARNIITWTSMVTGYAKMGDLESARRYFDE 217
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVH 126
MP+R+VVSW A+ S YAQ +E LF +L+ P++ + + SC + +
Sbjct: 218 MPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLA 277
Query: 127 ALALKFSLDAHV----YVANALINMYSK--------SCADE--------AWKV------- 159
L+ H+ +V AL++M++K + DE W +
Sbjct: 278 DSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTR 337
Query: 160 ----------FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
F+NM R+V+SWNSMIA + A +IELF +M +
Sbjct: 338 VGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEM------------ISC 385
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ PD T + VL AC + + + V ++ + + N+LI Y++CGS++
Sbjct: 386 MDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVAD 445
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ ++F M D+VS+N+++ +A +G KEA++L M ++PD T++ +L+ACSH
Sbjct: 446 AHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSH 505
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
AGL+ EG VF S+ P +DHYACMVDLLGR G + EA+ LI+ MPM+P + ++
Sbjct: 506 AGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYG 560
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL + R H L ELAA+KL +LEP + +V +SNIY G + + +R+ MK
Sbjct: 561 SLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGG 620
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
++K G+SW+E + +VH+F G + H Q + I+K L EL ++K +G+V + S AL D+E
Sbjct: 621 LKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVE 680
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE KEE L HSEKLA+ FA++ + + IR++KN+RIC+DCH +K+ S L G+E
Sbjct: 681 EEEKEEMLGTHSEKLAICFALL----ISEVGTTIRVVKNLRICLDCHTAIKMISKLEGRE 736
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
IVVRD+NRFH F + +CSC+DYW
Sbjct: 737 IVVRDNNRFHCFSEGMCSCHDYW 759
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 237/524 (45%), Gaps = 102/524 (19%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLIN---MYAKFGYLDDARHLFDEMPKRNVVSW 76
NI+Q Q H H+++N + + +V+ LIN ++A Y+D +F P + +
Sbjct: 13 NIRQLRQFHGHLVHNSLHS-HNYWVSLLLINCTRLHAHPAYVDS---IFTSSPSPDASVY 68
Query: 77 TALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFS-L 134
+ ++ Y++ G + LF C+ P F + LI G + HA LK +
Sbjct: 69 SCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPF-VYIYLIKLAGKSGNMFHAYVLKLGHI 127
Query: 135 DAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF-- 191
D H ++ NA+++MY+K+ D A +FE M R + WNSMI+ E +A+ LF
Sbjct: 128 DDH-FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNM 186
Query: 192 ----------------AKMKNEE-------------------------------EALFLF 204
AKM + E EAL LF
Sbjct: 187 MPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLF 246
Query: 205 RQLQREGMAPDWCTFSIVLKACAG------------LVTERH-------ASAVHSLIAKY 245
Q+ EG+ PD T+ + + +C+ ++ ++H +A+ + AK+
Sbjct: 247 HQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKF 306
Query: 246 G--------FED-----DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
G F++ + V N +I AY R G +SL++++FD M D+VSWNS++ Y
Sbjct: 307 GNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGY 366
Query: 293 ALHGQAKEALQLF----SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
A +G++ +++LF S M++QPD T S+LSAC H G ++ V + E + +
Sbjct: 367 AQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN-IKL 425
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAAT 406
+ + ++ + + G + +A ++ + M D V ++ L+ + HG+ + +
Sbjct: 426 GISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGHGKEAIKLVLTM 484
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+ + +EP D + ++ + +G N+ + + K ++ V Y
Sbjct: 485 EEEGIEP-DHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHY 527
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 219/614 (35%), Positives = 334/614 (54%), Gaps = 44/614 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ TL G +++A ++ E M ++ +N +I ++ + G ++ AR +F+
Sbjct: 174 WNTLLAGYVQAGEVEEAERVFEGM------PERNTIASNSMIALFGRKGCVEKARRIFNG 227
Query: 68 MP--KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL---- 120
+ +R++VSW+A++S Y Q+ EE LF + +E + S L +C +
Sbjct: 228 VRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVE 287
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENM-EFRNVISWNSMIAA 177
G+ VH LA+K ++ +V + NALI++YS SC + +A ++F++ E ++ISWNSMI+
Sbjct: 288 MGRWVHGLAVKVGVEDYVSLKNALIHLYS-SCGEIVDARRIFDDGGELLDLISWNSMISG 346
Query: 178 FRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTF 219
+ C A LF M ++ EAL LF+++Q G+ PD
Sbjct: 347 YLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETAL 406
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ AC L T +H+ I++ + + +++ LI Y +CG + + +VF M
Sbjct: 407 VSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEE 466
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
+ +WN+++ A++G +++L +F++M P+ TF+ +L AC H GLV +G
Sbjct: 467 KGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHY 526
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F+SM+ H + + HY CMVDLLGR G + EAE+LI MPM PD W LLG+CRKH
Sbjct: 527 FNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHR 586
Query: 397 ETRLAELAATKLKQLEPGDSLGF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
+ + E KL QL+P D GF V +SNIY G++ IR M V K PG S
Sbjct: 587 DNEMGERLGRKLIQLQP-DHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSM 645
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
IE VHEF +G K HPQ I L+ + +LK GYVP TS DI+EE KE L+
Sbjct: 646 IEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALF 705
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HSEKLA+ F ++ + IR+ KN+RIC DCH +KL S ++IVVRD +RF
Sbjct: 706 RHSEKLAVAFGLIT----ISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRF 761
Query: 576 HHFKDRICSCNDYW 589
HHFK CSC D+W
Sbjct: 762 HHFKHGACSCMDFW 775
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 188/423 (44%), Gaps = 92/423 (21%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L CA + + QLH H +++ + D++V N L+N+YA G + AR +F+E
Sbjct: 108 YPILLQCCAARVSEFEGRQLHAHAVSSGFD--GDVYVRNTLMNLYAVCGSVGSARRVFEE 165
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
P ++VSW L++GY Q G EE R+F + P ++AS
Sbjct: 166 SPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM-----PERNTIAS--------------- 205
Query: 128 LALKFSLDAHVYVANALINMYS-KSCADEAWKVFENMEF--RNVISWNSMIAAFRACKLE 184
N++I ++ K C ++A ++F + R+++SW++M++ +
Sbjct: 206 --------------NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYE----- 246
Query: 185 AQAIELFAKMKNE--EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+NE EEAL LF +++ G+A D L AC+ ++ VH L
Sbjct: 247 ----------QNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLA 296
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFD--------------------------- 275
K G ED + NALIH Y+ CG I ++++FD
Sbjct: 297 VKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDA 356
Query: 276 -----KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
M D+VSW++++ YA H EAL LF M V+PD VS +SAC+H
Sbjct: 357 EMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHL 416
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
+ G K H+ + + + + ++D+ + G + A ++ M + S +V
Sbjct: 417 ATLDLG-KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAV 475
Query: 388 LLG 390
+LG
Sbjct: 476 ILG 478
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 22/239 (9%)
Query: 109 SLASVLISCD-YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA----DEAWKVFENM 163
+L S+L SC H K + + + L Y A+ LIN S S + ++F ++
Sbjct: 5 TLDSLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHL 64
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
N +WN+++ A L+ + + +AL ++ PD T+ I+L
Sbjct: 65 RNPNTFTWNTIMRA-----------HLYLQ-NSPHQALLHYKLFLASHAKPDSYTYPILL 112
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
+ CA V+E +H+ GF+ D + N L++ YA CGS+ +++VF++ DLV
Sbjct: 113 QCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLV 172
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQPDSATFV--SLLSACSHAGLVQEGNKVFHSM 340
SWN++L Y G+ +EA ++F M P+ T S+++ G V++ ++F+ +
Sbjct: 173 SWNTLLAGYVQAGEVEEAERVFEGM---PERNTIASNSMIALFGRKGCVEKARRIFNGV 228
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 221/623 (35%), Positives = 344/623 (55%), Gaps = 68/623 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ C GN +A+ L M +++ ++ YAK G L+ AR FDE
Sbjct: 164 WNSMISGCWKSGNETEAVVLFNMM------PARNIITWTSMVTGYAKMGDLESARRYFDE 217
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVH 126
MP+R+VVSW A+ S YAQ +E LF +L+ P++ + + SC + +
Sbjct: 218 MPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLA 277
Query: 127 ALALKFSLDAHV----YVANALINMYSK--------SCADE--------AWKV------- 159
L+ H+ +V AL++M++K + DE W +
Sbjct: 278 DSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTR 337
Query: 160 ----------FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
F+NM R+V+SWNSMIA + A +IELF +M +
Sbjct: 338 VGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEM------------ISC 385
Query: 210 EGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ PD T + VL AC + + + V ++ + + N+LI Y++CGS++
Sbjct: 386 MDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVAD 445
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
+ ++F M D+VS+N+++ +A +G KEA++L M ++PD T++ +L+ACSH
Sbjct: 446 AHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSH 505
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
AGL+ EG VF S+ P +DHYACMVDLLGR G + EA+ LI+ MPM+P + ++
Sbjct: 506 AGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYG 560
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LL + R H L ELAA+KL +LEP + +V +SNIY G + + +R+ MK
Sbjct: 561 SLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGG 620
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
++K G+SW+E + +VH+F G + H Q + I+K L EL ++K +G+V + S AL D+E
Sbjct: 621 LKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVE 680
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE KEE L HSEKLA+ FA++ + + IR++KN+RIC+DCH +K+ S L G+E
Sbjct: 681 EEEKEEMLGTHSEKLAICFALL----ISEVGTTIRVVKNLRICLDCHTAIKMISKLEGRE 736
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
IVVRD+NRFH F + +CSC+DYW
Sbjct: 737 IVVRDNNRFHCFSEGMCSCHDYW 759
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 237/524 (45%), Gaps = 102/524 (19%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLIN---MYAKFGYLDDARHLFDEMPKRNVVSW 76
NI+Q Q H H+++N + + +V+ LIN ++A Y+D +F P + +
Sbjct: 13 NIRQLRQFHGHLVHNSLHS-HNYWVSLLLINCTRLHAHPAYVDS---IFTSSPSPDASVY 68
Query: 77 TALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFS-L 134
+ ++ Y++ G + LF C+ P F + LI G L HA LK +
Sbjct: 69 SCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPF-VYIYLIKLAGKSGNLFHAYVLKLGHI 127
Query: 135 DAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF-- 191
D H ++ NA+++MY+K+ D A +FE M R + WNSMI+ E +A+ LF
Sbjct: 128 DDH-FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNM 186
Query: 192 ----------------AKMKNEE-------------------------------EALFLF 204
AKM + E EAL LF
Sbjct: 187 MPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLF 246
Query: 205 RQLQREGMAPDWCTFSIVLKACAG------------LVTERH-------ASAVHSLIAKY 245
Q+ EG+ PD T+ + + +C+ ++ ++H +A+ + AK+
Sbjct: 247 HQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKF 306
Query: 246 G--------FED-----DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
G F++ + V N +I AY R G +SL++++FD M D+VSWNS++ Y
Sbjct: 307 GNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGY 366
Query: 293 ALHGQAKEALQLF----SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
A +G++ +++LF S M++QPD T S+LSAC H G ++ V + E + +
Sbjct: 367 AQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN-IKL 425
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAAT 406
+ + ++ + + G + +A ++ + M D V ++ L+ + HG+ + +
Sbjct: 426 GISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGHGKEAIKLVLTM 484
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+ + +EP D + ++ + +G N+ + + K ++ V Y
Sbjct: 485 EEEGIEP-DHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHY 527
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 200/561 (35%), Positives = 312/561 (55%), Gaps = 31/561 (5%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVL 114
G L AR +FD + + N W +I GY+ EE L+ +L + P N ++ +L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 115 ISCDYLHG----KLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFRNVI 169
+C + + +HA +K + +Y N+L+N+YSKS ++ ++ F+ ++ R+ +
Sbjct: 126 KACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREG 211
SWNSMI + C A E+F M +EAL LF ++Q G
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ D L+ACA L +H+ I K+ E D ++ LI YA+CG + +
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VF KM + W +++ YA+HG+ +EAL+ F M V+P+ TF +L+ACSHAG
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV E +F SM HG P ++HY CMVDLLGR G + EAE+LI MP++P++ IW L
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +C HG L + L Q++PG ++ +++I+ +G +N+A +R++MK V
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PG S I + HEF +G + HPQ + I LE+++ +L+ GY P+ L D+E++
Sbjct: 486 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDK 545
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE ++HHSEKLA+ F +++ + IRI+KN+R+C DCH +KL S + +EI+
Sbjct: 546 EKETAIHHHSEKLAVTFGLIST----KPGMTIRIVKNLRVCEDCHTVIKLISKVYAREIL 601
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
+RD RFH FKD C+C DYW
Sbjct: 602 MRDRTRFHLFKDGNCTCGDYW 622
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 340/621 (54%), Gaps = 43/621 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L +CA ++ +LH +I + F+ N L+ YA G AR +FDE
Sbjct: 16 YRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDE 75
Query: 68 MPK--RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYL 120
+P ++ V WT L+ + +H ++E +F + + P+E +L + C D +
Sbjct: 76 IPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVV 135
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFR 179
G H +K L NA+++MY+KS EA +VF M+ ++V+SW ++
Sbjct: 136 VGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVI 195
Query: 180 ACKLEAQAIELFAKMKNEEE-------ALFLFRQLQREG------------MAPDWCTFS 220
+ +F +M E A +L L +E M ++ T
Sbjct: 196 RSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLC 255
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFED-DTVIANALIHAYARCGSISLSKQVFDKMTY 279
+L AC+ VH+ K ++ + ++ A++ YA+CG I ++ + F KM
Sbjct: 256 SILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQ 315
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKVF 337
++VSWN++L A+HG + AL +F M +PD TF S+LSACSH+GLV +G F
Sbjct: 316 RNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEAKPDDVTFTSVLSACSHSGLVDQGCFYF 375
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
++ +G+ P+++HYACMVDLLGR GR+ EAE L+REMP+ P+ V+ LLGSC HG+
Sbjct: 376 GNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGK 435
Query: 398 TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
+L E +L QL+P ++ + +SN+Y L+G N+A +R+ +K ++K PG+S I
Sbjct: 436 LQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIH 495
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSL-------ALHD--IEEE 508
+ +VH+F++G K HP+ ++ L+E+I +L+ GY P T+L +L D +E+E
Sbjct: 496 VGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVEQE 555
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE+ L+ HSEKLA+ F +++ G + I KN+RIC DCH+ +K+ S + +EIV
Sbjct: 556 EKEQALFSHSEKLAICFGLISTGP----GVPLHIFKNLRICQDCHSAIKIVSKIYNREIV 611
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
+RD NRFH FK+ CSC DYW
Sbjct: 612 IRDRNRFHCFKEGSCSCCDYW 632
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/498 (40%), Positives = 287/498 (57%), Gaps = 35/498 (7%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ HA L F LD +V +L+NMYS SC D A ++F+ +++ +WNS++ A+
Sbjct: 80 GQRTHAQILLFGLDKDPFVRTSLLNMYS-SCGDLSSALRIFDESVSKDLPAWNSVVNAYA 138
Query: 180 ACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREG-----MAPDW 216
L A +LF +M +EAL LFR++Q ++P+
Sbjct: 139 KAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNK 198
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T S VL AC L VHS I KYG E D V+ ALI YA+CGS+ +K+VFD
Sbjct: 199 FTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDA 258
Query: 277 M-TYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQ 331
+ + D+ ++++++ A++G E Q+FS M N+ P+S TFV +L AC H GL+
Sbjct: 259 LGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLIN 318
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G F M E G+ P + HY CMVDL GR G I EAE I MPMEPD +IW LL
Sbjct: 319 KGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 378
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
R G+ + E A +L +L+P +S +V +SN+Y +G + + + IR EM+ ++K P
Sbjct: 379 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVP 438
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S++E+E VHEF G + + E I+ LEE++ +L+ GYV +T L D+EE+ KE
Sbjct: 439 GCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKE 498
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L +HSEKLA+ F +M R + +RI+KN+RIC DCH MK+ S L +EIVVRD
Sbjct: 499 MALSYHSEKLAIAFCLMKT----RPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRD 554
Query: 572 SNRFHHFKDRICSCNDYW 589
NRFHHF D CSC D+W
Sbjct: 555 CNRFHHFSDGSCSCRDFW 572
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 167/348 (47%), Gaps = 41/348 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
++ +C G++ A+++ + ++ +DL N ++N YAK G ++ AR LFDEMP+
Sbjct: 105 MYSSC---GDLSSALRIFDESVS------KDLPAWNSVVNAYAKAGLINHARKLFDEMPE 155
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLL------QYFFPNEFSLASVLISCDYL---- 120
RNV+SW+ LI+GY G +E LF + + PN+F++++VL +C L
Sbjct: 156 RNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALE 215
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENM-EFRNVISWNSMIAAF 178
GK VH+ K+ ++ + + ALI+MY+K + + A +VF+ + ++V ++++MI
Sbjct: 216 QGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCL 275
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
L + ++F++M + P+ TF +L AC GL+ + S
Sbjct: 276 AMYGLTDECFQVFSEMTTSNN------------INPNSVTFVGILGACVHRGLIN-KGKS 322
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALH 295
+ ++G ++ Y R G I ++ M D++ W S+L +
Sbjct: 323 YFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 382
Query: 296 GQAKE---ALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
G K AL+ ++ +S +V L + + G E ++ H M
Sbjct: 383 GDIKTCEGALKRLIELDPM-NSGAYVLLSNVYAKTGRWIEVKRIRHEM 429
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 218/597 (36%), Positives = 325/597 (54%), Gaps = 45/597 (7%)
Query: 20 NIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
++ Q QLH + +P EP LF+ ++ + + F ++ A +FD + + W
Sbjct: 51 DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 110
Query: 79 LISGYAQH-GNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL----HGKLVHALALK 131
LI A EE F L+ +L+ P++ + VL +C Y+ GK VH +K
Sbjct: 111 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 170
Query: 132 FSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
VYV N LI++Y S C D A KVF+ M R+++SWNSMI A
Sbjct: 171 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL------------ 218
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED- 249
+ + AL LFR++QR PD T VL ACAGL + + H+ + + D
Sbjct: 219 -VRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 276
Query: 250 --DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D ++ N+LI Y +CGS+ +++QVF M DL SWN+++ +A HG+A+EA+ F
Sbjct: 277 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 336
Query: 308 M-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M NV+P+S TFV LL AC+H G V +G + F M+ ++ + P L+HY C+VDL+ R
Sbjct: 337 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 396
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET-RLAELAATKL------KQLEPGD 415
G I EA ++ MPM+PD+VIW LL +C K G + L+E A + + G+
Sbjct: 397 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 456
Query: 416 SLG-FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
G +V +S +Y + +N ++RK M +RK PG S IEI HEF +G HPQ
Sbjct: 457 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQ 516
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLA--LHDIEEEHKEEQLYHHSEKLALVFAIMNQGS 532
+ I+++L+ + +L+ +GY+P+ S A + + KE L HSE+LA+ F ++N
Sbjct: 517 TKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLIN--- 573
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ IRI KN+R+C DCH KL S + EI+VRD RFHHFKD CSC DYW
Sbjct: 574 -LPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 629
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/496 (38%), Positives = 294/496 (59%), Gaps = 25/496 (5%)
Query: 104 FPNEFSLASVLISC-----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAW 157
P++ + L +C D GKL+H+ L+ L+++ VA AL+NMY K+ C DEA
Sbjct: 7 LPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEAT 66
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+VF +E ++++SW ++++A+ L +A++LF +M +G PD
Sbjct: 67 RVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLH----------GLDGTKPDRS 116
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFED-DTVIANALIHAYARCGSISLSKQVFDK 276
F+ +L+ACA L H I + G++ D V+ +I+ Y +CG++ + +VFD
Sbjct: 117 YFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDG 176
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M+ D V+W +I+ YA HG ++E+L +F M +PD + + +LS CSHAGLV++G
Sbjct: 177 MSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQG 236
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
F + + GV P HY CM+DLLGR G + AE +IR MP + ++ W++ L +C+
Sbjct: 237 WDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACK 296
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H +T + AA K+ +LEP + +V +SNIY +G +++ +R MK ++K PG
Sbjct: 297 VHSDTERGKRAAEKVLELEPVPA-AYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGR 355
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S IE+ +RVHEF +G K HP+ I+ LE L Q++G GYVP+T L L ++ EE KE
Sbjct: 356 SSIEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERL 415
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F +++ + S +RI+KN+R+C DCH K S + G+EI +RDS
Sbjct: 416 LCFHSEKLAIAFGLLSTPA----GSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQ 471
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF+D CSC DYW
Sbjct: 472 RFHHFQDGHCSCGDYW 487
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 30/312 (9%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL---- 99
V L+NMY K G LD+A +F + ++++VSWTAL+S Y++ E +LF +
Sbjct: 48 VATALVNMYGKAGCLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHG 107
Query: 100 LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVAN-ALINMYSKSCAD 154
L P+ A +L +C L G+L H + D+ V +INMY K C +
Sbjct: 108 LDGTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGK-CGN 166
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +VF+ M R+ ++W ++I+ +A + EE+L +F ++Q++G
Sbjct: 167 LRAAHEVFDGMSERDTVAWTTIISG-------------YAHHGHSEESLLMFWRMQQDGS 213
Query: 213 APDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
PD + VL C AGLV E+ + ++G E +I R G + +
Sbjct: 214 KPDGVSLLCVLSVCSHAGLV-EQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAA 272
Query: 271 KQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSN-MNVQPDSATFVSLLSACSHAG 328
+ + +M + ++W L A +H + + + ++P A +VSL + + AG
Sbjct: 273 EVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAG 332
Query: 329 LVQEGNKVFHSM 340
+ ++V +M
Sbjct: 333 EWDQVDRVRSAM 344
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTE-RHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+Q+EG+ PD F L AC G + + R +HS + + G E +TV+A AL++ Y + G
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV------QPDSATFVS 319
+ + +VF + DLVSW +++ AY+ +EALQLF M + +PD + F
Sbjct: 61 CLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-MVDLLGRVGRILEAEKLIREMPM 378
LL AC+ EG ++ H ++ G ++++ G+ G + A ++ M
Sbjct: 121 LLQACATLSAAAEG-RLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMS- 178
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
E D+V W+ ++ HG + + L +++Q
Sbjct: 179 ERDTVAWTTIISGYAHHGHSEESLLMFWRMQQ 210
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A L ACA + H I + D + +INMY K G L A +FD
Sbjct: 118 FAFLLQACATLSAAAEGRLAHRR-IQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDG 176
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVH 126
M +R+ V+WT +ISGYA HG++EE +F + Q P+ SL VL C H LV
Sbjct: 177 MSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCS--HAGLVE 234
Query: 127 A-------LALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFR-NVISWNSMIAA 177
+ +F ++ +I++ +S EA +V M F+ ++W +A
Sbjct: 235 QGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLA- 293
Query: 178 FRACKL 183
ACK+
Sbjct: 294 --ACKV 297
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 222/614 (36%), Positives = 333/614 (54%), Gaps = 49/614 (7%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
H +I+ +L C+ ++ Q QLH + +P EP LF+ ++ + + F ++ A
Sbjct: 47 HHQRIF-SLAETCS---DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYA 102
Query: 62 RHLFDEMPKRNVVSWTALISGYAQH-GNAEECFRLFCSLLQY--FFPNEFSLASVLISCD 118
+FD + + W LI A EE F L+ +L+ P++ + VL +C
Sbjct: 103 FRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACA 162
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNS 173
Y+ GK VH +K VYV N LI++Y S C D A KVF+ M R+++SWNS
Sbjct: 163 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 222
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI A + + AL LFR++QR PD T VL ACAGL +
Sbjct: 223 MIDAL-------------VRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLS 268
Query: 234 HASAVHSLIAKYGFED---DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+ H+ + + D D ++ N+LI Y +CGS+ +++QVF M DL SWN+++
Sbjct: 269 LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMIL 328
Query: 291 AYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+A HG+A+EA+ F M NV+P+S TFV LL AC+H G V +G + F M+ ++
Sbjct: 329 GFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYC 388
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET-RLAELA 404
+ P L+HY C+VDL+ R G I EA ++ MPM+PD+VIW LL +C K G + L+E
Sbjct: 389 IEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEI 448
Query: 405 ATKL------KQLEPGDSLG-FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
A + + G+ G +V +S +Y + +N ++RK M +RK PG S IE
Sbjct: 449 ARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIE 508
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA--LHDIEEEHKEEQLY 515
I HEF +G HPQ + I+++L+ + +L+ +GY+P+ S A + + KE L
Sbjct: 509 INGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLR 568
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HSE+LA+ F ++N ++ IRI KN+R+C DCH KL S + EI+VRD RF
Sbjct: 569 LHSERLAIAFGLIN----LPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRF 624
Query: 576 HHFKDRICSCNDYW 589
HHFKD CSC DYW
Sbjct: 625 HHFKDGSCSCLDYW 638
>gi|224123200|ref|XP_002330363.1| predicted protein [Populus trichocarpa]
gi|222871567|gb|EEF08698.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 213/563 (37%), Positives = 319/563 (56%), Gaps = 30/563 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D TNHL+N Y +F + A HLFDEM + NVVSWT+L+SGY G + L+ +
Sbjct: 39 NDTITTNHLLNSYLRFRRIQYAHHLFDEMHEPNVVSWTSLMSGYVNMGRPQSALWLYTKM 98
Query: 100 LQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
+ PN F+LA+V+ SC L GK+VHA L ++ V ++L++MY K +
Sbjct: 99 SESEVSPNGFTLATVINSCSILADLKTGKMVHAHVQILGLQGNLVVCSSLVDMYGKCNDV 158
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D A VF++M RNV+SW +MIA + A+ EAL +FR+ M
Sbjct: 159 DGARMVFDSMSCRNVVSWTAMIAGY-------------AQNGKGYEALEVFREFSSYMME 205
Query: 214 -PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ + V+ ACA L H + + G+E + V+A+AL+ YA+CGS S++
Sbjct: 206 RPNHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVVASALVDMYAKCGSFLYSEK 265
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGL 329
VF ++ ++ + S++ A +G K +L LF M V P+ TFV +L ACSH+GL
Sbjct: 266 VFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFEEMTDRKVMPNDVTFVGILHACSHSGL 325
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD--SVIWSV 387
V EG ++ +SM E HGV+P + HY C+VD+L RVGR+ EA KL + + + P+ +++W
Sbjct: 326 VDEGLRLLNSMHEKHGVMPDVRHYTCVVDMLSRVGRLDEAYKLAKSIRVNPNEGALLWGT 385
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LL S R HG +A A+ L + + +V +SN Y L+G + A +R EM+ V
Sbjct: 386 LLSSSRLHGRVDMAVEASKWLIEYNQQVAGAYVTLSNTYTLAGEWENAHSLRTEMELVGV 445
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV-PETSLALHDIE 506
K PG SWIEI++ ++ F +G + + + L EL ++ G V T L D+E
Sbjct: 446 HKEPGCSWIEIKDSIYVFYAGDLSCERGDEVISLLRELERRMMERGCVGGSTGLVFVDVE 505
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
+E KE+ + HSE+LAL F +++ + IR+MKN+RIC DCH KL S ++ ++
Sbjct: 506 QEVKEKIVGLHSERLALAFGLIS----IPKGVTIRVMKNLRICSDCHEAFKLISKIVERD 561
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
VVRD NRFHHFKD C+C D+W
Sbjct: 562 FVVRDVNRFHHFKDGSCTCKDFW 584
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 164/337 (48%), Gaps = 36/337 (10%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
AT+ ++C++ ++K +H H+ +L V + L++MY K +D AR +FD M
Sbjct: 111 ATVINSCSILADLKTGKMVHAHV--QILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSM 168
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYL----HG 122
RNVVSWTA+I+GYAQ+G E +F Y PN F LASV+ +C L G
Sbjct: 169 SCRNVVSWTAMIAGYAQNGKGYEALEVFREFSSYMMERPNHFMLASVINACASLGRLVSG 228
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAW--KVFENMEFRNVISWNSMIAAFRA 180
K+ H ++ + + VA+AL++MY+K C + KVF + +VI + SMI
Sbjct: 229 KVTHGAVIRGGYELNDVVASALVDMYAK-CGSFLYSEKVFRRIRNPSVIPYTSMIVGAAK 287
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAV 238
L ++ LF +M + + + P+ TF +L AC +GLV E +
Sbjct: 288 YGLGKLSLNLFEEMTDRK-------------VMPNDVTFVGILHACSHSGLVDE-GLRLL 333
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSIS----LSKQVFDKMTYHDLVSWNSILKAYAL 294
+S+ K+G D ++ +R G + L+K + L+ W ++L + L
Sbjct: 334 NSMHEKHGVMPDVRHYTCVVDMLSRVGRLDEAYKLAKSIRVNPNEGALL-WGTLLSSSRL 392
Query: 295 HGQ---AKEALQLFSNMNVQPDSATFVSLLSACSHAG 328
HG+ A EA + N Q A +V+L + + AG
Sbjct: 393 HGRVDMAVEASKWLIEYNQQVAGA-YVTLSNTYTLAG 428
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 140/289 (48%), Gaps = 20/289 (6%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
D++ HA KF L N L+N Y + A +F+ M NV+SW S+++
Sbjct: 21 DFIFAISTHANLFKFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHEPNVVSWTSLMS 80
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ M + AL+L+ ++ ++P+ T + V+ +C+ L +
Sbjct: 81 G-------------YVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTGK 127
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH+ + G + + V+ ++L+ Y +C + ++ VFD M+ ++VSW +++ YA +G
Sbjct: 128 MVHAHVQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNG 187
Query: 297 QAKEALQLF----SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
+ EAL++F S M +P+ S+++AC+ G + G KV H + G
Sbjct: 188 KGYEALEVFREFSSYMMERPNHFMLASVINACASLGRLVSG-KVTHGAVIRGGYELNDVV 246
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ +VD+ + G L +EK+ R + P + ++ ++ K+G +L+
Sbjct: 247 ASALVDMYAKCGSFLYSEKVFRRIR-NPSVIPYTSMIVGAAKYGLGKLS 294
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
LK C + A + H+ + K+G +DT+ N L+++Y R I + +FD+M ++
Sbjct: 16 LKNCKDFI---FAISTHANLFKFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHEPNV 72
Query: 283 VSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
VSW S++ Y G+ + AL L++ M+ V P+ T +++++CS ++ G K+ H+
Sbjct: 73 VSWTSLMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTG-KMVHA 131
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
++ G+ L + +VD+ G+ + A + M + V W+ ++ ++G+
Sbjct: 132 HVQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCR-NVVSWTAMIAGYAQNGK 188
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 204/535 (38%), Positives = 296/535 (55%), Gaps = 52/535 (9%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ---HGNAEECFRLFCSLLQYFFPNE 107
MYA+ G DDA +F+EM R+VVSW A+ISG+A G A + FR +L Q P+
Sbjct: 1 MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVAL-QCPKPDA 59
Query: 108 FSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRN 167
++AS+L S + V +AL VF+ M F
Sbjct: 60 GTMASILPS---MGKARVEDIALLKG-------------------------VFDEMRFTG 91
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
+ISWN+M+A + ++ +A+ELF +M Q++G+ PD T + VL +C
Sbjct: 92 LISWNAMLAVYTNNEMHVEAVELFMRM-------------QKDGIEPDAVTLATVLPSCG 138
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
+ +H +I + ++ NAL+ YA CG + ++ VFD M D+VSW S
Sbjct: 139 EVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTS 198
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
I+ AY HG +EA+ LF M ++PDS FV++L+ACSHAGL+ G F+SM
Sbjct: 199 IISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEF 258
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
+ P+L+HYACMVDLLGR G I EA I MP++P+ +W LLG+CR H + LA
Sbjct: 259 HIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLA 318
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
A L +L P + +V +SNIY +G + ++R M+ ++K PG+S E+ + VH
Sbjct: 319 ADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDSVHT 378
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F G HPQ + I+KKL EL+ +++ MGY PE LHD+EEE KE L HSEKLA+
Sbjct: 379 FHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIA 438
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
F ++N + IRI N+R C DCH+ KL S + G+EI+++D NR H+ K
Sbjct: 439 FLLINTNP----GTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 489
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
AT+ +C + ++HE + + + N L++MYA G L +AR +FD M
Sbjct: 131 ATVLPSCGEVSALSLGKRIHE--VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSM 188
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLVHA 127
R+VVSWT++IS Y +HG+ E LF + Q P+ + ++L +C + G L
Sbjct: 189 GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHA-GLLDMG 247
Query: 128 LALKFSLDAHVYVANAL------INMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFR 179
+S+ + ++A L +++ ++ C EA+ M + N W +++ A R
Sbjct: 248 KHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACR 307
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/565 (36%), Positives = 315/565 (55%), Gaps = 33/565 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNA------EECF 93
D+F+ + ++ MYAK G L +A LF + NVV + A+I+G + A E
Sbjct: 250 SDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREAL 309
Query: 94 RLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMY 148
L+ + P EF+ +SV+ +C D GK +H LK ++ +ALI++Y
Sbjct: 310 SLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLY 369
Query: 149 SKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
S C ++ ++ F ++ ++V++W +MI+ C ELF E AL LF +L
Sbjct: 370 LNSGCMEDGFRCFTSVPKQDVVTWTAMISG---CVQN----ELF------ERALTLFHEL 416
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
G+ PD T S V+ ACA L R + K GF T + N+ IH YAR G +
Sbjct: 417 LGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDV 476
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ + F +M HD+VSW++++ ++A HG A++AL+ F+ M V P+ TF+ +L+AC
Sbjct: 477 HAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTAC 536
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH GLV EG K + +M E + + P + H C+VDLLGR GR+ +AE IR+ + VI
Sbjct: 537 SHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVI 596
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LL SCR H + +L A ++ +L+P S +V + NIY +G + A IR MK
Sbjct: 597 WRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKE 656
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
V+K PGLSWIE+ + VH F +G K HP+ AI+ KL E++ ++ + +S D
Sbjct: 657 RGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDD 716
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
+++ + HSEKLA+ +++ + + IR+MKN+R+C DCH MKL S
Sbjct: 717 T-IRNEQSWMNWHSEKLAVALGLIH----LPQSAPIRVMKNLRVCRDCHLTMKLISKSEK 771
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EIV+RD+ RFHHF+D CSC DYW
Sbjct: 772 REIVLRDAIRFHHFRDGSCSCADYW 796
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 197/409 (48%), Gaps = 30/409 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA AC+ G +++ +H ++ +FV+N L++MYA+ G + AR +FD
Sbjct: 117 YAAALAACSRAGRLREGKAVHA--LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDA 174
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHGKL-- 124
+R+ VSW AL+SGY + G ++ R+F + + N F+L SV+ C +
Sbjct: 175 ADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMD 234
Query: 125 ----VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
VH +K D+ V++A+A++ MY+K A EA +F+++ NV+ +N+MIA
Sbjct: 235 IAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGL- 293
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
C+ EA + EAL L+ ++Q GM P TFS V++AC +H
Sbjct: 294 -CRDEAAVGTDVLR-----EALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIH 347
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K+ F+ D I +ALI Y G + + F + D+V+W +++ + +
Sbjct: 348 GQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFE 407
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
AL LF + ++PD T S+++AC+ + + G ++ + + M
Sbjct: 408 RALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQI-----QCFATKSGFGRFTAM 462
Query: 357 ----VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + R G + A + +EM D V WS ++ S +HG R A
Sbjct: 463 GNSCIHMYARSGDVHAAVRRFQEMESH-DIVSWSAVISSHAQHGCARDA 510
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 197/392 (50%), Gaps = 43/392 (10%)
Query: 22 KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALIS 81
+ A +H H++ P+ LF+ N L+ Y + G AR L DEMP+ N VS+ LI
Sbjct: 31 RHAAAVHAHIVRAHPSP--SLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLID 86
Query: 82 GYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDYL----HGKLVHALALKFSLD 135
Y++ G E F + + F+ A+ L +C GK VHAL++ +
Sbjct: 87 AYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIA 146
Query: 136 AHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V+V+N+L++MY++ C D +A +VF+ + R+ +SWN++++ + +
Sbjct: 147 GGVFVSNSLVSMYAR-CGDMGQARQVFDAADERDDVSWNALVSG-------------YVR 192
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH--ASAVHSLIAKYGFEDDT 251
+++ L +F ++R G+ + V+K CAG A+AVH + K GF+ D
Sbjct: 193 AGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDV 252
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA------KEALQLF 305
+A+A++ YA+ G++S + +F + ++V +N+++ A +EAL L+
Sbjct: 253 FLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLY 312
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLL 360
S + ++P TF S++ AC+ AG ++ G ++ +L++ Q D + + ++DL
Sbjct: 313 SEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKH---CFQGDDFIGSALIDLY 369
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G + + + +P + D V W+ ++ C
Sbjct: 370 LNSGCMEDGFRCFTSVPKQ-DVVTWTAMISGC 400
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 21/279 (7%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAF-R 179
H VHA ++ +++ N L+ Y + A ++ + M N +S+N +I A+ R
Sbjct: 32 HAAAVHAHIVRAHPSPSLFLRNTLLAAYCR-LGGHARRLLDEMPRTNAVSFNLLIDAYSR 90
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A + EA ++E FA+ + + G+ D T++ L AC+ R AVH
Sbjct: 91 AGQPEA-SLETFARAR------------RSAGVRADRFTYAAALAACSRAGRLREGKAVH 137
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+L G ++N+L+ YARCG + ++QVFD D VSWN+++ Y G
Sbjct: 138 ALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQD 197
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHA-GLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+ L++F+ M + +S S++ C+ + V + H + G + +
Sbjct: 198 DMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASA 257
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-GSCR 393
MV + + G + EA L + + ++P+ V+++ ++ G CR
Sbjct: 258 MVGMYAKKGALSEAVALFKSV-LDPNVVVFNAMIAGLCR 295
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 322/591 (54%), Gaps = 35/591 (5%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H+I + D+F + LI++ LD A +F ++ N+ + + I G++
Sbjct: 34 IHAHLIR--AHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGS 91
Query: 87 GNAEECFRLFC-SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVA 141
+ ++ F + S P+ + ++ +C G H ++ D+ VYV
Sbjct: 92 KDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQ 151
Query: 142 NALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE-- 197
N+L+ MYS + D A VF + +V+SW SM+A + A +LF KM +
Sbjct: 152 NSLVTMYS-TLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNL 210
Query: 198 ----------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++A+ L+ LQ EG+ + V+ +CA L H
Sbjct: 211 VTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDY 270
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I + + ++ AL+ YARCGSI + VFD++ D +SW +++ +A+HG A++A
Sbjct: 271 ILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKA 330
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+ FS M + P TF ++LSACSH GLV+ G ++F SM ++ + P+L+HY CMVD
Sbjct: 331 LEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVD 390
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G++ EAEK + EMPM+P++ IW LLG+CR H + +AE A L +L+P S
Sbjct: 391 LLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGY 450
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SNIY + + IR+ MK V K PG + E++ +VH+F G K HP+ + I
Sbjct: 451 YVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQI 510
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ EE++G+++ GY AL DI+EE KE ++ HSEKLA+ +AIM +
Sbjct: 511 ERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMR----TKGHD 566
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KN+R+C DCH KL S + +E++VRD NRFHHFK CSC DYW
Sbjct: 567 PIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 193/432 (44%), Gaps = 61/432 (14%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA-------------- 53
Y L AC G++ +Q H +I + D++V N L+ MY+
Sbjct: 116 YPFLVKACTQKGSLDMGIQAHGQIIRH--GFDSDVYVQNSLVTMYSTLGDIKSASYVFRR 173
Query: 54 -----------------KFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF 96
K G + AR LFD+MP++N+V+W+ +ISGYA++ ++ L+
Sbjct: 174 ISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELY 233
Query: 97 CSLLQY--FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK 150
LLQ NE + SV+ SC +L G+ H L+ + ++ + AL++MY++
Sbjct: 234 F-LLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYAR 292
Query: 151 -SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
D+A VF+ + R+ +SW ++IA F +A+E F++M ++
Sbjct: 293 CGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRM-------------EK 339
Query: 210 EGMAPDWCTFSIVLKACA-GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G+ P TF+ VL AC+ G + ER S+ Y E ++ R G ++
Sbjct: 340 AGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLA 399
Query: 269 LSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLSACSH 326
+++ ++M + W ++L A +H ++ A + + ++P+ + + LLS
Sbjct: 400 EAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYA 459
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
E + M++ GVV + + ++ G+V + +K E ++ +W
Sbjct: 460 RTNKWENVENIRQMMKERGVVKPPGY--TLFEMDGKVHKFTIGDKTHPE--IQQIERMWE 515
Query: 387 VLLGSCRKHGET 398
+LG R G T
Sbjct: 516 EILGKIRLAGYT 527
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
L++C L H +H+ + + D A+ LI + + QVF ++ +L
Sbjct: 22 LESCTTL---SHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 283 VSWNSILKAYALHGQAKEALQLF--SNMN-VQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+NS ++ ++ ++ + S N + PD+ T+ L+ AC+ G + G + H
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQA-HG 137
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
+ HG + +V + +G I A + R + D V W+ ++ K G+
Sbjct: 138 QIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISC-LDVVSWTSMVAGYIKSGDV- 195
Query: 400 LAELAATKLKQLEPGDSL-GFVQMSNIYCLSGSFNKA 435
+A KL P +L + M + Y + F+KA
Sbjct: 196 ---TSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKA 229
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 200/561 (35%), Positives = 312/561 (55%), Gaps = 31/561 (5%)
Query: 56 GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVL 114
G L AR +FD + + N W +I GY+ EE L+ +L + P N ++ +L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 115 ISCDYLHG----KLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFRNVI 169
+C + + +HA +K + +Y N+L+N+YSKS ++ ++ F+ ++ R+ +
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREG 211
SWNSMI + C A E+F M +EAL LF ++Q G
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ D L+ACA L +H+ I K+ E D ++ LI YA+CG + +
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VF KM + W +++ YA+HG+ +EAL+ F M V+P+ TF +L+ACSHAG
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV E +F SM HG P ++HY CMVDLLGR G + EAE+LI MP++P++ IW L
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +C HG L + L Q++PG ++ +++I+ +G +N+A +R++MK V
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PG S I + HEF +G + HPQ + I LE+++ +L+ GY P+ L D+E++
Sbjct: 486 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDK 545
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
KE ++HHSEKLA+ F +++ + IRI+KN+R+C DCH +KL S + +EI+
Sbjct: 546 EKETAIHHHSEKLAVTFGLIST----KPGMTIRIVKNLRVCEDCHTVIKLISKVYAREIL 601
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
+RD RFH FKD C+C DYW
Sbjct: 602 MRDRTRFHLFKDGNCTCGDYW 622
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 205/584 (35%), Positives = 323/584 (55%), Gaps = 23/584 (3%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ Q+H M+ + +HL+N +KF A +F+ +P + + L
Sbjct: 17 NLNTLKQVHAQMLTT--GLSFQTYYLSHLLNTSSKFAS-TYAFTIFNHIPNPTLFLYNTL 73
Query: 80 ISGYAQHGNA-EECFRLFCSLLQY--FFPNEFSLASVLISCD----YLHGKLVHALALKF 132
IS H + F L+ +L + PN F+ S+ +C HG +HA LKF
Sbjct: 74 ISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKF 133
Query: 133 SLDAH-VYVANALINMYSKS---CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
+ +V N+L+N Y+K C +F+ + ++ +WN+M+AA+
Sbjct: 134 LQPPYDPFVQNSLLNFYAKYGKLCVSR--YLFDQISEPDLATWNTMLAAYAQSASHVSYS 191
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
F EAL LF +Q + P+ T ++ AC+ L + H + + +
Sbjct: 192 TSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLK 251
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
+ + AL+ Y++CG ++L+ Q+FD+++ D +N+++ +A+HG +AL+L+ NM
Sbjct: 252 LNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNM 311
Query: 309 NVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
++ PD AT V + ACSH GLV+EG ++F SM HG+ P+L+HY C++DLLGR GR
Sbjct: 312 KLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGR 371
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNI 425
+ EAE+ +++MPM+P++++W LLG+ + HG + E A L +LEP S +V +SN+
Sbjct: 372 LKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNM 431
Query: 426 YCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEEL 485
Y G +N + +R MK V K PG S +EI +HEF +G K HP + I+ K+ E+
Sbjct: 432 YASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEI 491
Query: 486 IGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKN 545
+L G+ P TS L D+EEE KE+ L +HSE+LA+ FA++ S IRI+KN
Sbjct: 492 NRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIASSS----SMPIRIIKN 547
Query: 546 IRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R+C DCH KL S ++I+VRD NRFHHFKD CSC DYW
Sbjct: 548 LRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 184/387 (47%), Gaps = 40/387 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +LF ACA H ++ LH H++ F P D FV N L+N YAK+G L +R+LFD+
Sbjct: 107 FPSLFKACASHPWLQHGPPLHAHVL-KFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQ 165
Query: 68 MPKRNVVSWTALISGYAQHGN-------------AEECFRLFCSL-LQYFFPNEFSLASV 113
+ + ++ +W +++ YAQ + + E LFC + L PNE +L ++
Sbjct: 166 ISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVAL 225
Query: 114 LISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNV 168
+ +C L G H L+ +L + +V AL++MYSK C + A ++F+ + R+
Sbjct: 226 ISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDT 285
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA- 227
+N+MI F QA+EL+ MK E+ + PD T + + AC+
Sbjct: 286 FCYNAMIGGFAVHGHGNQALELYRNMKLED-------------LVPDGATIVVTMFACSH 332
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWN 286
G + E S+ +G E LI R G + +++ M + + W
Sbjct: 333 GGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWR 392
Query: 287 SILKAYALHGQAKEALQLFSNM-NVQPD-SATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
S+L A LHG + ++ ++P+ S +V L + + G + +V ++++H
Sbjct: 393 SLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRV-RMLMKDH 451
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEK 371
G V +L ++ +V++ G + L +K
Sbjct: 452 G-VDKLPGFS-LVEINGAMHEFLTGDK 476
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 333/625 (53%), Gaps = 56/625 (8%)
Query: 4 STQIYATLFHACALHGNIKQAMQLH---------------EHMIN------NFPN----- 37
+T ++ +C ++ QLH H+++ +FP+
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 38 ---EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
++ +N LIN Y + G L +AR +FDEMP R + +W A+I+G Q EE
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 162
Query: 95 LFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYS 149
LF + F P+E++L SV L G+ +H +K+ L+ + V ++L +MY
Sbjct: 163 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 222
Query: 150 KSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
++ + V +M RN+++WN++I A+ E L+L++ ++
Sbjct: 223 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGN-------------AQNGCPETVLYLYKMMK 269
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G P+ TF VL +C+ L +H+ K G + ++LI Y++CG +
Sbjct: 270 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 329
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSAC 324
+ + F + D V W+S++ AY HGQ EA++LF+ M N++ + F++LL AC
Sbjct: 330 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 389
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH+GL +G ++F M+E +G P L HY C+VDLLGR G + +AE +IR MP++ D VI
Sbjct: 390 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 449
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LL +C H +A+ ++ Q++P DS +V ++N++ + + +RK M+
Sbjct: 450 WKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRD 509
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
V+K G+SW E + VH+F G + + + I+ L+EL ++K GY P+T+ LHD
Sbjct: 510 KNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHD 569
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
++EE KE L HSEKLA+ FA+M + E + IRI+KN+R+C DCH K S +
Sbjct: 570 MDEEEKESDLVQHSEKLAVAFALM----ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKN 625
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI +RD +RFHHF + CSC DYW
Sbjct: 626 REITLRDGSRFHHFINGKCSCGDYW 650
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/562 (35%), Positives = 311/562 (55%), Gaps = 32/562 (5%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G++ A +L E + +++ N L Y K G L AR LFDEMP+RNV +W A
Sbjct: 156 GDLTAARELFERIPR------RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNA 209
Query: 79 LISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFS 133
+++G G EE F + + P+EF L SV C D + G+ VHA ++
Sbjct: 210 MVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG 269
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
LD + V ++L +MY + C E V + +++S N++IA
Sbjct: 270 LDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGR-------------T 316
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ + E AL F ++ G+A D TF + +C+ L +H + K G +
Sbjct: 317 QNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 376
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ L+H Y+RCG + S++VF D ++++ AY HG ++A++LF M
Sbjct: 377 VMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGG 436
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+P TF++LL ACSH+GL +EG F M + +G+ P + HY C+VDLLGR G + EA
Sbjct: 437 AEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEA 496
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
E LI MP+ PD VIW LL +C+ +AE A ++ +L+P DS +V +SNI S
Sbjct: 497 EALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATS 556
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
+ +RK M+ + VRK PG+SW+E++ +H+F +G + HP+++ I + LEE++ ++
Sbjct: 557 RRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKI 616
Query: 490 KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRIC 549
+ GY P+ S+ LHD+E+E KE L HHSEKLA+ FA ++ E IR+MKN+R+C
Sbjct: 617 RQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLS----LPEGVPIRVMKNLRVC 672
Query: 550 VDCHNFMKLASDLLGKEIVVRD 571
DCH +KL S + G+EIVVRD
Sbjct: 673 DDCHLAIKLMSQVTGREIVVRD 694
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +HA A + AN L+ Y+ A ++FE + RNV+SWN + +
Sbjct: 127 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 186
Query: 182 KLEAQAIELFAKMKN------------------EEEALFLFRQLQREGMAPDWCTFSIVL 223
A +LF +M +EE+L F ++REGM PD V
Sbjct: 187 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 246
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
+ CAGL VH+ + + G + D + ++L H Y RCG + + V + +V
Sbjct: 247 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 306
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
S N+I+ +G ++ AL+ F M V D TFVS +S+CS + +G ++ H
Sbjct: 307 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI-HGQ 365
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ GV + C+V + R G + ++E++
Sbjct: 366 VMKAGVDKVVPVMTCLVHMYSRCGCLGDSERV 397
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 25/322 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++F CA ++ Q+H +++ + + +D+ V + L +MY + G L + + +
Sbjct: 243 GSVFRCCAGLRDVVTGRQVHAYVVRSGLD--RDMCVGSSLAHMYMRCGCLQEGEAVLRML 300
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISCDYL----HGK 123
P ++VS +I+G Q+G++E FC + + + S + SC L G+
Sbjct: 301 PSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQ 360
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+H +K +D V V L++MYS+ C ++ +VF + ++MI+A+
Sbjct: 361 QIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHG 420
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
+AIELF +M N G P TF +L AC+ + L+
Sbjct: 421 HGQKAIELFKQMMN-------------GGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 467
Query: 243 AK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKE 300
K YG + ++ R G + ++ + M D V W ++L A
Sbjct: 468 TKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDM 527
Query: 301 ALQLFSN-MNVQP-DSATFVSL 320
A ++ + + P DSA++V L
Sbjct: 528 AERIAKRVIELDPHDSASYVLL 549
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
FS + +AC L R +H+ A G D AN L+ AYA G ++ ++++F+++
Sbjct: 113 FSHLFRACRALRPLRQ---LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 169
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+++SWN + Y +G A +LF M + + AT+ ++++ ++ G +E F
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMP-ERNVATWNAMVAGLTNLGFDEESLGFFL 228
Query: 339 SM 340
M
Sbjct: 229 DM 230
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 312/555 (56%), Gaps = 27/555 (4%)
Query: 45 TNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-F 103
+N LIN Y + G L +AR +FDEMP R + +W A+I+G Q EE LF + F
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWK 158
P+E++L SV L G+ +H +K+ L+ + V ++L +MY ++ +
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
V +M RN+++WN++I A+ E L+L++ ++ G P+ T
Sbjct: 148 VIRSMPVRNLVAWNTLIMGN-------------AQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F VL +C+ L +H+ K G + ++LI Y++CG + + + F +
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGN 334
D V W+S++ AY HGQ EA++LF+ M N++ + F++LL ACSH+GL +G
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F M+E +G P L HY C+VDLLGR G + +AE +IR MP++ D VIW LL +C
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H +A+ ++ Q++P DS +V ++N++ + + +RK M+ V+K G+S
Sbjct: 375 HKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 434
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W E + VH+F G + + + I+ L+EL ++K GY P+T+ LHD++EE KE L
Sbjct: 435 WFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDL 494
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ FA+M + E + IRI+KN+R+C DCH K S + +EI +RD +R
Sbjct: 495 VQHSEKLAVAFALM----ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSR 550
Query: 575 FHHFKDRICSCNDYW 589
FHHF + CSC DYW
Sbjct: 551 FHHFINGKCSCGDYW 565
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 26/347 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++F A ++ Q+H + I DL V + L +MY + G L D + M
Sbjct: 95 GSVFSGSAGLRSVSIGQQIHGYTIKY--GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM 152
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGK 123
P RN+V+W LI G AQ+G E L+ + + PN+ + +VL SC L G+
Sbjct: 153 PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA A+K + V V ++LI+MYSK C +A K F E + + W+SMI+A+
Sbjct: 213 QIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG 272
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHS 240
+AIELF M ++ M + F +L AC +GL ++
Sbjct: 273 QGDEAIELFNTMA------------EQTNMEINEVAFLNLLYACSHSGL-KDKGLELFDM 319
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAK 299
++ KYGF+ ++ R G + ++ + M D+V W ++L A +H A+
Sbjct: 320 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAE 379
Query: 300 EALQLFSN-MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
A ++F + + P DSA +V L + + A ++ ++V SM + +
Sbjct: 380 MAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKN 426
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ T+ +C+ Q Q+H I + V + LI+MY+K G L DA F E
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIK--IGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 252
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDY------ 119
+ V W+++IS Y HG +E LF ++ + NE + ++L +C +
Sbjct: 253 REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDK 312
Query: 120 ---LHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFR-NVISWNSMI 175
L +V K L + V + L C D+A + +M + +++ W +++
Sbjct: 313 GLELFDMMVEKYGFKPGLKHYTCVVDLL---GRAGCLDQAEAIIRSMPIKTDIVIWKTLL 369
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ AC + KN E A +F+++ + + P+ AC L+ HA
Sbjct: 370 S---ACNIH----------KNAEMAQRVFKEILQ--IDPN-------DSACYVLLANVHA 407
Query: 236 SA 237
SA
Sbjct: 408 SA 409
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 312/555 (56%), Gaps = 27/555 (4%)
Query: 45 TNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-F 103
+N LIN Y + G L +AR +FDEMP R + +W A+I+G Q EE LF + F
Sbjct: 26 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 85
Query: 104 FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWK 158
P+E++L SV L G+ +H +K+ L+ + V ++L +MY ++ +
Sbjct: 86 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 145
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
V +M RN+++WN++I A+ E L+L++ ++ G P+ T
Sbjct: 146 VIRSMPVRNLVAWNTLIMGN-------------AQNGCPETVLYLYKMMKISGCRPNKIT 192
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F VL +C+ L +H+ K G + ++LI Y++CG + + + F +
Sbjct: 193 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 252
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGN 334
D V W+S++ AY HGQ EA++LF+ M N++ + F++LL ACSH+GL +G
Sbjct: 253 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 312
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F M+E +G P L HY C+VDLLGR G + +AE +IR MP++ D VIW LL +C
Sbjct: 313 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 372
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H +A+ ++ Q++P DS +V ++N++ + + +RK M+ V+K G+S
Sbjct: 373 HKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 432
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
W E + VH+F G + + + I+ L+EL ++K GY P+T+ LHD++EE KE L
Sbjct: 433 WFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDL 492
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ FA+M + E + IRI+KN+R+C DCH K S + +EI +RD +R
Sbjct: 493 VQHSEKLAVAFALM----ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSR 548
Query: 575 FHHFKDRICSCNDYW 589
FHHF + CSC DYW
Sbjct: 549 FHHFINGKCSCGDYW 563
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 26/347 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++F A ++ Q+H + I DL V + L +MY + G L D + M
Sbjct: 93 GSVFSGSAGLRSVSIGQQIHGYTIKY--GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM 150
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGK 123
P RN+V+W LI G AQ+G E L+ + + PN+ + +VL SC L G+
Sbjct: 151 PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 210
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA A+K + V V ++LI+MYSK C +A K F E + + W+SMI+A+
Sbjct: 211 QIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG 270
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHS 240
+AIELF M ++ M + F +L AC +GL ++
Sbjct: 271 QGDEAIELFNTMA------------EQTNMEINEVAFLNLLYACSHSGL-KDKGLELFDM 317
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAK 299
++ KYGF+ ++ R G + ++ + M D+V W ++L A +H A+
Sbjct: 318 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAE 377
Query: 300 EALQLFSN-MNVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
A ++F + + P DSA +V L + + A ++ ++V SM + +
Sbjct: 378 MAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKN 424
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ T+ +C+ Q Q+H I + V + LI+MY+K G L DA F E
Sbjct: 193 FVTVLSSCSDLAIRGQGQQIHAEAIK--IGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 250
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCDY------ 119
+ V W+++IS Y HG +E LF ++ + NE + ++L +C +
Sbjct: 251 REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDK 310
Query: 120 ---LHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFR-NVISWNSMI 175
L +V K L + V + L C D+A + +M + +++ W +++
Sbjct: 311 GLELFDMMVEKYGFKPGLKHYTCVVDLL---GRAGCLDQAEAIIRSMPIKTDIVIWKTLL 367
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ AC + KN E A +F+++ + + P+ AC L+ HA
Sbjct: 368 S---ACNIH----------KNAEMAQRVFKEILQ--IDPN-------DSACYVLLANVHA 405
Query: 236 SA 237
SA
Sbjct: 406 SA 407
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/590 (34%), Positives = 325/590 (55%), Gaps = 50/590 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ CA G + +H I + + + + +N L++MY+K G LD A +F++M
Sbjct: 256 SVLVGCANSGTLSLGKAVHSLAIKS--SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKL 124
+RNVVSWT++I+GY + G ++ L + + + ++ S+L +C +GK
Sbjct: 314 ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKL 183
VH ++ ++++V NAL++MY+K + E A VF M +++ISWN+M+ +
Sbjct: 374 VHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELK---- 429
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
PD T + +L ACA L +H I
Sbjct: 430 ------------------------------PDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G+ D +ANAL+ Y +CG + L++ +FD + DLVSW ++ Y +HG EA+
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M ++PD +F+S+L ACSH+GL+++G + F+ M + + P+L+HYACMVDLL
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLL 579
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R G + +A K I +P+ PD+ IW LL CR + + LAE A ++ +LEP ++ +V
Sbjct: 580 SRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYV 639
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK-RHPQREAIF 479
++NIY + + + +R+++ +RK PG SWIEI+ RV+ F SG HP + I
Sbjct: 640 LLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIE 699
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
L+++ ++K GY P+T AL + +E KE L HSEKLA+ F ++ R
Sbjct: 700 SLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLT----LPPRKT 755
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH K S +EIV+RDSNRFHHFKD CSC +W
Sbjct: 756 IRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 202/436 (46%), Gaps = 70/436 (16%)
Query: 16 ALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYL----------------- 58
A G++K+ ++ + M E +++++ N +++ YAK G
Sbjct: 145 ATCGDLKEGRRVFDTM------EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 59 ---DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF-SLASVL 114
+ A LFD++ R+V+SW ++ISGY +G E ++ ++ + ++ SVL
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 115 ISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNV 168
+ C GK VH+LA+K S + + +N L++MYSK C D A +VFE M RNV
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK-CGDLDGALRVFEKMGERNV 317
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SW SMIA + + + A+ L +Q+++EG+ D + +L ACA
Sbjct: 318 VSWTSMIAG-------------YTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACAR 364
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ + VH I + + NAL+ YA+CGS+ + VF M D++SWN++
Sbjct: 365 SGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM 424
Query: 289 LKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ ++PDS T +L AC+ ++ G ++ +L N G
Sbjct: 425 VG------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRN-GYSS 465
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAAT 406
+VDL + G +L +L+ +M D V W+V++ H G +A
Sbjct: 466 DRHVANALVDLYVKCG-VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM 524
Query: 407 KLKQLEPGDSLGFVQM 422
+ +EP D + F+ +
Sbjct: 525 RDAGIEP-DEVSFISI 539
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 182/426 (42%), Gaps = 65/426 (15%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T+ Y ++ CA ++ ++H + +N + L + L++ YA G L + R +
Sbjct: 99 TKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGL--KLVSFYATCGDLKEGRRV 156
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL 124
FD M K+NV W ++S YA+ G+ +E LF +++ + GK
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE----------------KGIEGKR 200
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
+ A ++F+ + R+VISWNSMI+ + + L
Sbjct: 201 ----------------------------PESASELFDKLCDRDVISWNSMISGYVSNGLT 232
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
E L +++Q+ G+ D T VL CA T AVHSL K
Sbjct: 233 -------------ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
FE +N L+ Y++CG + + +VF+KM ++VSW S++ Y G + A+ L
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIIL 339
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
M V+ D S+L AC+ +G + G V H ++ + + L ++D+
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV-HDYIKANNMASNLFVCNALMDMYA 398
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA-TKLKQLEPGDSLGFV 420
+ G + A + M ++ D + W+ ++G + T L A L LE G +
Sbjct: 399 KCGSMEGANSVFSTMVVK-DIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGY 457
Query: 421 QMSNIY 426
+ N Y
Sbjct: 458 ILRNGY 463
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 127/315 (40%), Gaps = 65/315 (20%)
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
F ++ + E A+ L Q+ + T+ VL+ CAGL + VHS+I D
Sbjct: 76 FCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVD 133
Query: 251 TVIANALIHAYARCGSISLSKQV------------------------------------- 273
+ L+ YA CG + ++V
Sbjct: 134 EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 274 --------------FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
FDK+ D++SWNS++ Y +G + L ++ M + D AT
Sbjct: 194 KGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
+S+L C+++G + G K HS+ +++ ++D+ + G + A ++ +M
Sbjct: 254 IISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNIY---CLSGSF 432
E + V W+ ++ + G ++ A L+Q+E G L V +++I SGS
Sbjct: 313 G-ERNVVSWTSMIAGYTRDG---WSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 433 NKARLIRKEMKGSRV 447
+ + + +K + +
Sbjct: 369 DNGKDVHDYIKANNM 383
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/590 (35%), Positives = 318/590 (53%), Gaps = 20/590 (3%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ AC NI Q+H + I + N L +Y K G L+ F +P
Sbjct: 185 MLSACVASHNIDLGKQVHGYTIKY--GAASITSIGNSLCRLYTKSGNLESGIRAFKRIPD 242
Query: 71 RNVVSWTALISGYAQHGNAEEC-FRLFCSLLQ-YFFPNEFSLASVLISC----DYLHGKL 124
+NV++WT +IS A+ N E LF +L+ PNEF+L SV+ C D GK
Sbjct: 243 KNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQ 302
Query: 125 VHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
V K ++ V N+ + +Y K +EA ++FE ME +VI+WN+MI+ F A +
Sbjct: 303 VQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGF-AQIM 361
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
++ +L A+ + + AL +FR L R M PD TFS +L C+ ++ +H+
Sbjct: 362 DSAKDDLHARSRGFQ-ALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTI 420
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
K GF D V+ +AL++ Y +CG I + + F +M LV+W S++ Y+ HG+ +A+Q
Sbjct: 421 KTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQ 480
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF +M +P+ TFVSLLSACS+AGLV+E + F M + + P +DHY CM+D+
Sbjct: 481 LFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMF 540
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
R+GR+ +A I+ EP+ IWS L+ CR HG LA AA +L +L+P +V
Sbjct: 541 VRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYV 600
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+ N+Y +G + +RK K + SWI I ++V+ F + + HPQ +++
Sbjct: 601 LLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQ 660
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEE--QLYHHSEKLALVFAIMNQGSLCRERS 538
LE L+ + K +GY P + L+D EE+ K L HHSE+LA+ ++
Sbjct: 661 LLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLK----APPGV 716
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+RI KNI +C DCH+ +K S L +EIVVRDS R H FKD CSC D+
Sbjct: 717 TVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 207/412 (50%), Gaps = 36/412 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ +Y L H C G++ A LH HM+ D+FV L+N+Y + G DAR+L
Sbjct: 78 SAMYVPLLHRCIETGSLGGAKALHGHMVKT--GTIVDIFVATSLVNVYMRCGNSQDARNL 135
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLH-- 121
FDEMP++NVV+WTALI+GY + +F +L+ +P++++L +L +C H
Sbjct: 136 FDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNI 195
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSCADEAW-KVFENMEFRNVISWNSMIAAF 178
GK VH +K+ + + N+L +Y+KS E+ + F+ + +NVI+W +MI+
Sbjct: 196 DLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMIS-- 253
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
AC + EL L LF + + + P+ T + V+ C + V
Sbjct: 254 -ACAEDENYTEL---------GLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQV 303
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA----- 293
K G + + N+ ++ Y R G + ++F++M + +++WN+++ +A
Sbjct: 304 QGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDS 363
Query: 294 ----LHGQAK--EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
LH +++ +AL++F ++ ++PD TF S+LS CS +++G ++ H+
Sbjct: 364 AKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQI-HAQTIKT 422
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G + + + +V++ + G I A K EMP V W+ ++ +HG
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTR-TLVTWTSMISGYSQHG 473
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
LE +E + + +EA+ + + EG + + +L C + A A+H +
Sbjct: 49 LENGRLEAPPRPLDAQEAMAMLK----EGQSVQSAMYVPLLHRCIETGSLGGAKALHGHM 104
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
K G D +A +L++ Y RCG+ ++ +FD+M ++V+W +++ Y L+ Q AL
Sbjct: 105 VKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLAL 164
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
++F M P T +LSAC + + G +V H +G + L
Sbjct: 165 EVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQV-HGYTIKYGAASITSIGNSLCRL 223
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ G + + + +P + + + W+ ++ +C
Sbjct: 224 YTKSGNLESGIRAFKRIP-DKNVITWTTMISAC 255
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNH---LINMYAKFGYLDDARHL 64
+ +L AC+ G +++AM+ + M N + EP + +H +I+M+ + G LDDA
Sbjct: 497 FVSLLSACSYAGLVEEAMRYFDMMQNEYHIEP----LMDHYGCMIDMFVRLGRLDDAYAF 552
Query: 65 FDEMP-KRNVVSWTALISGYAQHGNAEECF 93
+ N W++L++G HGN E F
Sbjct: 553 IKRKGFEPNEAIWSSLVAGCRSHGNMELAF 582
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 309/539 (57%), Gaps = 27/539 (5%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDY 119
ARHLF+ M + ++V + ++ GY++ N E F LF +L+ P+ ++ S+L +C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
G+ +H L++K LD +VYV LINMY++ D A VF+ + V+ +N+M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAM 201
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I + A+ EAL LFR++Q + + P+ T VL +CA L +
Sbjct: 202 ITGY-------------ARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL 248
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H K+ F + ALI +A+CGS+ + +F+KM Y D +W++++ AYA
Sbjct: 249 GKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYAN 308
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG+A++++ +F M NVQPD TF+ LL+ACSH G V+EG K F M+ G+VP +
Sbjct: 309 HGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIK 368
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY MVDLL G + +A + I ++P+ P ++W +LL +C H LAE + ++ +L
Sbjct: 369 HYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+ +V +SN+Y + + +RK MK + K PG S IE+ N VHEF SG
Sbjct: 429 DDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGV 488
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALH-DIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+ + L+E++ +LK GYVP+TS+ +H ++ ++ KE L +HSEKLA+ F ++N
Sbjct: 489 KSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNT 548
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+R+C DCHN KL S + G+++V RD RFHHF+D CSC D+W
Sbjct: 549 PP----GTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 336/587 (57%), Gaps = 46/587 (7%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ +L A +G ++ A ++ + + +D+ LI YA GY++ A+ +FD
Sbjct: 112 VHTSLISMYAQNGRLEDAQKVFDR------SSHRDVVSYTALITGYASRGYIESAQKMFD 165
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH---- 121
E+P ++VVSW A+ISGYA+ GN ++ LF +++ P+E ++A+V+ +C
Sbjct: 166 EIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIEL 225
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ VH+ +++ + NALI++YSK C + A ++ E + ++VISWN++I +
Sbjct: 226 GRQVHSWINDHGFGSNLKIVNALIDLYSK-CGEVETACELLEGLSNKDVISWNTLIGGY- 283
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
M +EAL LF+++ R G P+ T +L ACA L +H
Sbjct: 284 ------------THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 331
Query: 240 SLIAKYGFEDDTVIANA------LIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAY 292
I K V+ NA LI YA+CG I + QV D ++ L +WN+++ +
Sbjct: 332 VYIDKK--LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGF 389
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
A+HG+A A +FS M ++PD TFV LLSACSH+G++ G +F SM +++ + P+
Sbjct: 390 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPK 449
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
L+HY CM+DLLG G EAE++I MPMEPD VIW LL +C+ HG L E A KL
Sbjct: 450 LEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI 509
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM--KGSRVRKYPGLSWIEIENRVHEFAS 467
++EP + +V +SNIY +G +N+ IR + KG + +K PG S IEI++ VHEF
Sbjct: 510 KIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMK-KKVPGCSSIEIDSVVHEFII 568
Query: 468 GGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAI 527
G K HPQ I+ LEE+ L+ G+VP+TS L ++EEE KE L HHSEKLA+ F +
Sbjct: 569 GDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 628
Query: 528 MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
++ + + + I+KN+R+C +CH KL S + +EI+ RD R
Sbjct: 629 IS----TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 195/421 (46%), Gaps = 33/421 (7%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASV 113
F L A +F+ +P+ N + W + G+A + +L+ ++ PN F+ +
Sbjct: 22 FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81
Query: 114 LISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D +YV +LI+MY+++ ++A KVF+ R+V
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141
Query: 169 ISWNSMIAAF--RACKLEAQA----------------IELFAKMKNEEEALFLFRQLQRE 210
+S+ ++I + R AQ I +A+ N ++AL LF+++ +
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T + V+ ACA + VHS I +GF + I NALI Y++CG + +
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
++ + ++ D++SWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321
Query: 328 GLVQEGNKV---FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
G + G + L+ V ++D+ + G I A ++
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
W+ ++ HG A +++++ +EP D + FV + + SG + R I + M
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEP-DDITFVGLLSACSHSGMLDLGRNIFRSM 440
Query: 443 K 443
+
Sbjct: 441 R 441
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/563 (36%), Positives = 324/563 (57%), Gaps = 35/563 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D +V L+N+Y + G L++A +F+E+P +N V W +I G+ F LF +
Sbjct: 147 DPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMR 206
Query: 101 QYFFP-NEFSLASVLISCDYLH----GKLVHALALKFS-LDAHVYVANALINMYSKSCA- 153
+ F + F + ++ +C ++ GK H L +K + +D++ ++ +L++MY K C
Sbjct: 207 RSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMK-CGF 265
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A K+FE + +R+V+ W+++IA F A+ E++ +FRQ+ + +
Sbjct: 266 LDFALKLFEEISYRDVVVWSAIIAGF-------------ARNGRALESISMFRQMLADSV 312
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P+ TF+ ++ AC+ L + + +VH + + G E D + I YA+CG I + +
Sbjct: 313 TPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYR 372
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VF ++ ++ SW++++ + +HG EAL LF M N P+S TFVS+LSACSH+G
Sbjct: 373 VFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGR 432
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++EG F SM ++G+ P +HYACMVDLLGR G+I EA I MP EP + W LL
Sbjct: 433 IEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALL 492
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G+CR H LAE A KL LE S +V +SNIY G + + R +M + K
Sbjct: 493 GACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHK 552
Query: 450 YPGLSWIEIENRVHEFASGGK---RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
G + IEIE +++ F+S + ++ Q E+++ L+E +++ +GYVP+ LHD++
Sbjct: 553 IVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKE---RMRELGYVPDLRFVLHDVD 609
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
+E K+E L HSEKLA+VF ++N G E IRI KN+R+C DCH K S + ++
Sbjct: 610 DEVKQEVLCGHSEKLAIVFGLLNSG----EGMPIRITKNMRVCGDCHTASKFISLITRRK 665
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I++RD RFHH +D +CSC DYW
Sbjct: 666 IIMRDVKRFHHVQDGVCSCGDYW 688
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 181/367 (49%), Gaps = 25/367 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+ L + Y + G L A F+ + N+ SW +++ ++++ + +LF +
Sbjct: 45 RSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRM 104
Query: 100 LQYF-FPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
L+ + F+L + +C L KL H+LA+K L+ YVA AL+N+Y++
Sbjct: 105 LKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSL 164
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+EA KVFE + +N + W MI E ELF++M+ R G
Sbjct: 165 EEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMR-------------RSGFE 211
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT-VIANALIHAYARCGSISLSKQ 272
D +++AC + + H L K F D + +L+ Y +CG + + +
Sbjct: 212 LDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALK 271
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
+F++++Y D+V W++I+ +A +G+A E++ +F M +V P+S TF S++ ACS G
Sbjct: 272 LFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGS 331
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+++G V M+ N GV + +Y +D+ + G I+ A ++ ++P E + WS ++
Sbjct: 332 LKQGRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMI 389
Query: 390 GSCRKHG 396
HG
Sbjct: 390 NGFGMHG 396
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNH--LINMYAKFGYLDDARHLF 65
+A++ AC+ G++KQ +H +MI N +L V N+ I+MYAK G + A +F
Sbjct: 319 FASIVLACSSLGSLKQGRSVHGYMIRN----GVELDVKNYTSFIDMYAKCGCIVTAYRVF 374
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDY 119
++P++NV SW+ +I+G+ HG E LF + PN + SVL +C +
Sbjct: 375 CQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSH 429
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 311/529 (58%), Gaps = 35/529 (6%)
Query: 61 ARHLFDEMPKR-NVVSWTALISGYAQHGNAEECFRLFCSLL--------QYFFPNEFSLA 111
A +F ++ K NV W LI GYA+ GN+ F L+ + + +P F +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYP--FLIK 129
Query: 112 SVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVI 169
+V D G+ +H++ ++ + +YV N+L+++Y+ +C D A+KVF+ M ++++
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEKDLV 188
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
+WNS+I F A+ EEAL L+ ++ +G+ PD T +L ACA +
Sbjct: 189 AWNSVINGF-------------AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
VH + K G + +N L+ YARCG + +K +FD+M + VSW S++
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 290 KAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
A++G KEA++LF M + P TFV +L ACSH G+V+EG + F M E +
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ P+++H+ CMVDLL R G++ +A + I+ MPM+P+ VIW LLG+C HG++ LAE A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
++ QLEP S +V +SN+Y ++ + IRK+M V+K PG S +E+ NRVHEF
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
G K HPQ +AI+ KL+E+ G+L+ GYVP+ S D+EEE KE + +HSEK+A+ F
Sbjct: 476 LMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAF 535
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
+++ ERS I ++KN+R+C DCH +KL S + +EIVVRD +R
Sbjct: 536 MLISTP----ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 151/305 (49%), Gaps = 28/305 (9%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
T Y L A +++ +H +I + F + ++V N L+++YA G + A
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSL---IYVQNSLLHLYANCGDVASAYK 177
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH- 121
+FD+MP++++V+W ++I+G+A++G EE L+ + + P+ F++ S+L +C +
Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 237
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
GK VH +K L +++ +N L+++Y++ C +EA +F+ M +N +SW S+I
Sbjct: 238 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR-CGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERH 234
+AIELF M++ EG+ P TF +L AC+ G+V E
Sbjct: 297 GLAVNGFGKEAIELFKYMEST------------EGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYA 293
+ +Y E ++ AR G + + + M ++V W ++L A
Sbjct: 345 -EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 403
Query: 294 LHGQA 298
+HG +
Sbjct: 404 VHGDS 408
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 204/560 (36%), Positives = 312/560 (55%), Gaps = 34/560 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEM--PKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
FV LI+MY K +D+AR +F+E ++ V + AL+SGY + + LF +
Sbjct: 76 FVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMN 135
Query: 101 QYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ P N +L ++ +C + G +H LK+ D+ V V N I MY K +
Sbjct: 136 EEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVN 195
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A K+F+ M + +ISWN+M++ + L +EL+ R + G+ P
Sbjct: 196 YAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELY-------------RNMDMNGVHP 242
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T VL +CA L + V + GF + + NALI+ YARCG+++ ++ VF
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVF 302
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D M LVSW +I+ Y +HG + A+QLF M ++PD FV +LSACSHAGL
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + F M N+ + P +HY+CMVDLLGR GR+ EA+ LI MP++PD +W LLG+
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ H LAELA ++ +LEP + +V +SNIY + + IR MK +++K P
Sbjct: 423 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 482
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S++E++ RVH F G + H Q + I++ LEEL + PE + EE +K+
Sbjct: 483 GCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKD 538
Query: 512 --EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
++ HSEKLA+ F ++N + + + I+KN+RIC DCH F K+ S ++ +++ V
Sbjct: 539 GFTRVGVHSEKLAVAFGLLNTTT----GAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTV 594
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+ RFHHF++ CSC DYW
Sbjct: 595 RDATRFHHFRNGSCSCKDYW 614
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V N I MY K G ++ A+ LFDEMP + ++SW A++SGYAQ+G A L+ ++
Sbjct: 177 DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD 236
Query: 100 LQYFFPNEFSLASVLISCDYLHGKLV-HALALKF---SLDAHVYVANALINMYSKSCAD- 154
+ P+ +L VL SC L + V H + K ++ ++ NALINMY++ C +
Sbjct: 237 MNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYAR-CGNL 295
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A VF+ M R ++SW ++I + + E A+ LF+++ R G+
Sbjct: 296 TKAQAVFDGMPERTLVSWTAIIGG-------------YGMHGHGEIAVQLFKEMIRSGIE 342
Query: 214 PDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
PD F VL AC AGL T++ + Y E + ++ R G + ++
Sbjct: 343 PDGTAFVCVLSACSHAGL-TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQ 401
Query: 272 QVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSN-MNVQPDSATFVSLLS 322
+ + M D W ++L A +H + A F + ++P++ + LLS
Sbjct: 402 TLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLS 454
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+AL L+ Q+ R G P+ TF LK+CA L S H I K G + + LI
Sbjct: 23 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 82
Query: 259 HAYARCGSISLSKQVFDKMTYHD---LVSWNSILKAYALHGQAKEALQLFSNMN---VQP 312
Y + + +++VF++ +H V +N+++ Y + + +A+ LF MN V
Sbjct: 83 SMYCKGSLVDNARKVFEE-NFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPV 141
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+S T + L+ AC ++ G+ + S L+ +G + C + + + G + A+KL
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLK-YGFDSDVSVVNCFITMYMKCGSVNYAQKL 200
Query: 373 IREMPMEPDSVIWSVLLGSCRKHG-ETRLAEL 403
EMP++ + W+ ++ ++G T + EL
Sbjct: 201 FDEMPVK-GLISWNAMVSGYAQNGLATNVLEL 231
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 206/599 (34%), Positives = 337/599 (56%), Gaps = 39/599 (6%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMINNFP-NEPQDLFVTNHLINMYAKFGYLDDA 61
+ST TL ACA G++ A + + F D+FV + L+++Y++ G +++A
Sbjct: 106 NSTTFTLTL-TACARLGDLDAAESVR---VRAFAAGYGHDVFVCSALLHLYSRCGAMEEA 161
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN-EFSLASVLISC--- 117
+FD MP+++ V+W+ +++G+ G E ++ + ++ + E + V+ +C
Sbjct: 162 IRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMST 221
Query: 118 -DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMI 175
+ G VH L+ + V +L++MY+K+ D A +VF M +RN ++W+++I
Sbjct: 222 GNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALI 281
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV--LKACAGLVTER 233
+ F A+ EAL LFR+LQ +G+ P C++++V L ACA + +
Sbjct: 282 SGF-------------AQNGRAVEALDLFRELQADGLQP--CSWALVSALLACASVGFLK 326
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
++H I + E ++ A++ Y++CGS+ ++++F+K++ DLV WN+I+
Sbjct: 327 LGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCG 385
Query: 294 LHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG +AL LF +N ++PD ATF SLLSA SH+GLV+EG F M++ G+ P
Sbjct: 386 THGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAE 445
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
HY C+VDLL R G + EA ++ M EP IW +LL C + + L E A K+ +
Sbjct: 446 KHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILE 505
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
L P D +SN+Y + ++K R IRK MK S +K PG S IE++ H F +
Sbjct: 506 LRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQ 565
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HPQ I K + +L +++ +GYVP T HD++E ++ L +HSE+LA+ F ++N
Sbjct: 566 SHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDE---DQLLSYHSERLAIAFGLLNT 622
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R + I+KN+R+C DCH+ +K S ++ +EIVVRD+ RFHHFKD CSC DYW
Sbjct: 623 SPGTR----LVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 163/336 (48%), Gaps = 38/336 (11%)
Query: 76 WTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC------DYLHGKLVHALA 129
W L+S +++ G R+F +L PN + L +C D V A A
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAFA 135
Query: 130 LKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
+ D V+V +AL+++YS+ A +EA +VF+ M ++ ++W++M+A F +A+
Sbjct: 136 AGYGHD--VFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEAL 193
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
++++M+ G++ D V++AC R ++VH + ++
Sbjct: 194 AMYSRMRE-------------HGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMR 240
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM 308
D V +L+ YA+ G + ++ QVF M Y + V+W++++ +A +G+A EAL LF +
Sbjct: 241 MDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFREL 300
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM-----VDLL 360
+QP S VS L AC+ G ++ G + HG + + + C+ +D+
Sbjct: 301 QADGLQPCSWALVSALLACASVGFLKLGKSI-------HGFILRRLEWQCILGTAVLDMY 353
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ G + A KL ++ D V+W+ ++ C HG
Sbjct: 354 SKCGSLESARKLFNKLSSR-DLVLWNAIIACCGTHG 388
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
AL +FR L P+ TF++ L ACA L A +V G+ D + +AL+H
Sbjct: 92 ALRVFRALPSSAR-PNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLH 150
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
Y+RCG++ + +VFD M D V+W++++ + G+ EAL ++S M V D
Sbjct: 151 LYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVV 210
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
V ++ AC G + G V H L H + + +V + + G + A ++ R M
Sbjct: 211 MVGVIQACMSTGNARIGASV-HGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMM 269
Query: 377 PMEPDSVIWSVLLGSCRKHGE 397
P D V WS L+ ++G
Sbjct: 270 PYRND-VTWSALISGFAQNGR 289
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 283/495 (57%), Gaps = 25/495 (5%)
Query: 103 FFPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
FP+ + +VL S C GK +H ++ +++VYV+ AL+NMY S +A
Sbjct: 138 IFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDAR 197
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+VF+ + RN++SWN++I + ++ + I++F R++Q G P
Sbjct: 198 QVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVF-------------REMQIAGAKPVEV 244
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T VL ACA L + I + + ALI YA+CG + ++++F M
Sbjct: 245 TMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAM 304
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGN 334
++ +WN ++ YA++G+ + ALQ FS M +PD TF+ +L AC H GLV EG
Sbjct: 305 RVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGR 364
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
F SM E G+ P+++HY CMVDLLGR G + EA++LI+ M M+PD +IW LLG+CR
Sbjct: 365 TYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRI 424
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
HG +L E A KL +LEP + +V ++N+Y ++K +R+ M RVRK PG S
Sbjct: 425 HGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCS 484
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
IEI+N V+EF P E ++K L ++ +LK GYV +T +A +DIEEE KE L
Sbjct: 485 SIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSL 544
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
+HSEKLAL F ++ S +RI+KN+RIC DCH F K+ S + ++I VRD NR
Sbjct: 545 MYHSEKLALAFGLLKSPS----GLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNR 600
Query: 575 FHHFKDRICSCNDYW 589
FHHF CSC DYW
Sbjct: 601 FHHFVGGACSCKDYW 615
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 177/402 (44%), Gaps = 87/402 (21%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
+++V+ L+NMY + DAR +FDE+P RN+VSW ALI+GY + R+F ++
Sbjct: 176 NVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHN-------RMFRKVI 228
Query: 101 QYFF--------PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMY 148
F P E ++ VL++C +L G+ + L +V+V ALI+MY
Sbjct: 229 DVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMY 288
Query: 149 SK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
+K DEA K+F+ M +NV +WN +I+ +A E AL F ++
Sbjct: 289 AKCGVVDEAEKIFKAMRVKNVYTWNVLISG-------------YAMNGRGESALQAFSRM 335
Query: 208 QREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
E PD TF VL AC GLV E + S+ ++G ++ R G
Sbjct: 336 IMEKFKPDEVTFLGVLCACCHQGLVNEGR-TYFTSMKEEFGLRPRIEHYGCMVDLLGRAG 394
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS 325
+ ++Q+ M+ +QPD + LL AC
Sbjct: 395 FLDEAQQLIQAMS-------------------------------MQPDPIIWRELLGACR 423
Query: 326 HAGLVQEGNKVFHSMLE---NHGVVPQLDHYACMVDLLGR------VGRILEAE--KLIR 374
G +Q G +LE N+G ++Y + +L R VG + E + +R
Sbjct: 424 IHGNIQLGEFAIKKLLELEPNNG-----ENYVLLANLYARDQRWDKVGEVREMMDCRRVR 478
Query: 375 EMP----MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
++P +E D+V++ ++ + K G + +L A K+L+
Sbjct: 479 KVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLK 520
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 133/253 (52%), Gaps = 16/253 (6%)
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
++F++ Q+ + G+ PD TF VLK+ A L + A+H I + GFE + ++ AL++
Sbjct: 126 SVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVN 185
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSAT 316
Y C S+S ++QVFD++ ++VSWN+++ Y + ++ + +F M + +P T
Sbjct: 186 MYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVT 245
Query: 317 FVSLLSACSHAGLVQEG----NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
V +L AC+H G + +G + + H+ L + V ++D+ + G + EAEK+
Sbjct: 246 MVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVG-----TALIDMYAKCGVVDEAEKI 300
Query: 373 IREMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+ M ++ + W+VL+ + GE+ L + +++ +P D + F+ + C G
Sbjct: 301 FKAMRVK-NVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKP-DEVTFLGVLCACCHQG 358
Query: 431 SFNKARLIRKEMK 443
N+ R MK
Sbjct: 359 LVNEGRTYFTSMK 371
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
ACA G + Q + +++ +N ++FV LI+MYAK G +D+A +F M +NV
Sbjct: 252 ACAHLGALNQGRWIDDYIDHN--RLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNV 309
Query: 74 VSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLVH------ 126
+W LISGYA +G E + F + ++ F P+E + VL +C H LV+
Sbjct: 310 YTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCAC--CHQGLVNEGRTYF 367
Query: 127 -ALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFR-NVISWNSMIAAFR 179
++ +F L + ++++ ++ DEA ++ + M + + I W ++ A R
Sbjct: 368 TSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACR 423
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 204/594 (34%), Positives = 337/594 (56%), Gaps = 31/594 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ T+ AC G +++A LH I++ +D V LIN+Y K G L++A +F +
Sbjct: 221 FTTVLGACTAVGALEEAKILHAATISS-TGLDRDAAVGTALINLYGKCGALEEAFGVFVQ 279
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HG 122
+ +++VSW+++I+ +AQ G A+ +L + L+ PN + +VL + L +G
Sbjct: 280 IDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYG 339
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
K +HA ++ V + +AL+ MY + A +FE+ R+V+SW+SMIA +
Sbjct: 340 KEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGY--- 396
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ ++ AL LFR+++ +G+ P+ TF + ACAG+ R + +H
Sbjct: 397 ----------SQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHER 446
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ G + D +A AL++ Y +CG + ++ VF M +L++W SI AY +G +
Sbjct: 447 VRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRS 506
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+L M +Q PD FV++L +C++AG + +G ++ M ++ G+ P ++H CMVD
Sbjct: 507 LKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVD 566
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+LGR G++ AE+LI M E S+ W +LL +C+ H +T A AA K+ QLEP ++
Sbjct: 567 ILGRAGKLEAAEQLINTMKFE-SSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATP 625
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR--E 476
+V +S+++C +GS+ A R+ M G V++ G S IEI +RVHEF + P
Sbjct: 626 YVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVG 685
Query: 477 AIFKKLEELIGQLKGMGYVPE-TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
IF LE+L +++G GYVP+ T++ L D+EE KE + +HSE LAL I++ +
Sbjct: 686 EIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPA--- 742
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +RI KN+R+C DCH K S L+ + I VRD R HHF++ +CSC DYW
Sbjct: 743 -GTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 214/415 (51%), Gaps = 30/415 (7%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ + ++H H++ D V N ++ MY K G ++ A ++FD + NV SWT +
Sbjct: 132 NLDEGKRVHSHIMQT--GYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTII 189
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----HGKLVHALALKFS- 133
I+ YAQ+G+ E RL + Q P+ ++ +VL +C + K++HA + +
Sbjct: 190 IAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTG 249
Query: 134 LDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
LD V ALIN+Y K A +EA+ VF ++ ++++SW+SMIAA FA
Sbjct: 250 LDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAA-------------FA 296
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ + A+ L + EG+ P+ TF VL+A L ++ +H+ I + G+ DD
Sbjct: 297 QSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVC 356
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+ +AL+ Y G + ++ +F+ D+VSW+S++ Y+ + AL LF M
Sbjct: 357 LTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDG 416
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
VQP+S TFVS + AC+ G ++ G + H + G+ + +V+L G+ GR+ EA
Sbjct: 417 VQPNSVTFVSAIDACAGVGALRRGTQ-LHERVRCLGLDKDVPVATALVNLYGKCGRLEEA 475
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRK--HGETRLAELAATKLKQLEPGDSLGFVQM 422
E + M + + + W+ + + + HG L L +L+ ++P D + FV +
Sbjct: 476 EAVFLGMK-KKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKP-DGIVFVAI 528
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 184/363 (50%), Gaps = 28/363 (7%)
Query: 39 PQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
P + + N +I MY + G D A +FD M +NVV+WT+LIS + G+ + LF
Sbjct: 47 PDESLLENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRK 106
Query: 99 -LLQYFFPNEFSLASVLISC-----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
LL P+ + S+L+ + GK VH+ ++ + V N ++ MY K C
Sbjct: 107 MLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGK-C 165
Query: 153 AD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D +A VF++++ NV SW +IAA +A+ + E L L ++ +
Sbjct: 166 GDVEQAGNVFDSIQDPNVFSWTIIIAA-------------YAQNGHCMEVLRLLSRMNQA 212
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVH-SLIAKYGFEDDTVIANALIHAYARCGSISL 269
G+ PD TF+ VL AC + A +H + I+ G + D + ALI+ Y +CG++
Sbjct: 213 GVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEE 272
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSH 326
+ VF ++ D+VSW+S++ A+A GQAK A+QL M+ V+P++ TFV++L A +
Sbjct: 273 AFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTS 332
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
Q G ++ H+ + G + + +V + G + E + I E E D V WS
Sbjct: 333 LKAFQYGKEI-HARIVQAGYSDDVCLTSALVKMYCNWGWV-ETARSIFESSRERDVVSWS 390
Query: 387 VLL 389
++
Sbjct: 391 SMI 393
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 158/307 (51%), Gaps = 32/307 (10%)
Query: 111 ASVLISCDYLH----GKLVHALALKFSL-----DAHVYVANALINMYSK-SCADEAWKVF 160
A++L +C L GK VH L ++ SL + N +I MY + C D A VF
Sbjct: 14 AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
+ M+ +NV++W S+I+AF FA + +A+ LFR++ G++PD TF+
Sbjct: 74 DRMKDQNVVAWTSLISAF-----------TFAG--HFGDAMVLFRKMLLSGVSPDRITFT 120
Query: 221 IVLKACAGLVTERH---ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+L +G ER+ VHS I + G+E D ++ N ++ Y +CG + + VFD +
Sbjct: 121 SILLKWSG--RERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSI 178
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGN 334
++ SW I+ AYA +G E L+L S MN V+PD TF ++L AC+ G ++E
Sbjct: 179 QDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAK 238
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ + + + G+ +++L G+ G + EA + ++ D V WS ++ + +
Sbjct: 239 ILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQID-NKDIVSWSSMIAAFAQ 297
Query: 395 HGETRLA 401
G+ + A
Sbjct: 298 SGQAKSA 304
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 213/590 (36%), Positives = 316/590 (53%), Gaps = 66/590 (11%)
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVL---I 115
AR LF ++ +V + LI G + +LF + + P+ FS A +L
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 116 SCDYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCA---------DE-------AW- 157
+C L +G +H LA+ + LD+H++V LI+MY++ CA DE AW
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAE-CACLVFARKVFDEMIEPNIVAWN 176
Query: 158 ----------------KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK------ 195
+VF M RN+ SWN M+A + A E+F KM
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVS 236
Query: 196 ------------NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
N +A FR+++REGM P+ + + VL ACA +H +
Sbjct: 237 WSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVE 296
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
K GF + NALI Y++CG++ +++ VFD M VSW +++ A+HG +EA++
Sbjct: 297 KSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIR 356
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
LF+ M N++PDS TF+S+L ACSHAGLV G F M+ +G+ P ++HY CMVDL
Sbjct: 357 LFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLY 416
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
GR G++ +A + +MP+ P+ ++W LLG+C HG LA +L +L+P +S V
Sbjct: 417 GRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHV 476
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+SNIY ++G + +R+ M R++K PG S IE+ ++ F +G K++ +
Sbjct: 477 LLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQ 536
Query: 481 KLEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
KL E++ +L+ GYVPE LHDIE E KE+ + HSEKLA+ F + L R R+
Sbjct: 537 KLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGM---AKLPRGRA- 592
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN+RIC DCH MKL S + EIVVRD +RFH F CSC DYW
Sbjct: 593 IRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 137/279 (49%), Gaps = 33/279 (11%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
++L N ++ Y K G L AR +F +MP ++ VSW+ +I G+A +GN + F F +
Sbjct: 201 RNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREV 260
Query: 100 -LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
+ PNE SL VL +C + G+++H K + V NALI+ YSK C
Sbjct: 261 RREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSK-CGN 319
Query: 154 -DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D A VF+NM R+ +SW +MIA A EEA+ LF +++ +
Sbjct: 320 LDMARLVFDNMLRRSAVSWTAMIAG-------------MAMHGYGEEAIRLFNEMEESNI 366
Query: 213 APDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
PD TF +L AC AGLV + S ++ YG E ++ Y R G +
Sbjct: 367 KPDSITFISILYACSHAGLV-DLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKL--- 422
Query: 271 KQVFD-----KMTYHDLVSWNSILKAYALHGQAKEALQL 304
+Q +D ++ +D+V W ++L A ++HG A Q+
Sbjct: 423 QQAYDFVCQMPISPNDIV-WRTLLGACSIHGNLYLAGQV 460
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/563 (36%), Positives = 324/563 (57%), Gaps = 29/563 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D F TNHLIN Y + +DA LF+EM + NV+S+T+L++G+ + G + +FC +
Sbjct: 60 NDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGRPKSALLIFCKM 119
Query: 100 LQ-YFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
L+ + PN F+ A+V+ +C D G+ +H+ F + ++ V ++LI+MY K +
Sbjct: 120 LESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLIDMYGKCNNV 179
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+A +VF+ M++RNV+SW SMI A+ L A++LF E L L +
Sbjct: 180 DDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLF----REFNGLPL--------SS 227
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ + V+ ACA L H+ + + G E + V+A+AL+ YA+CG I S +V
Sbjct: 228 PNHFMLASVINACASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKV 287
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F ++ ++ + S++ A +G K +L +F M ++P+ TFV +L ACSH+GLV
Sbjct: 288 FRRIPDPSVIPYTSMIVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLV 347
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD--SVIWSVL 388
+G + HSM + HGVVP HY C+VD+LGR GR+ EA +L + + +EPD +++W L
Sbjct: 348 DDGLEYLHSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTL 407
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L + R +G +A A+ L + + +V MSN Y ++G + IR EMK V
Sbjct: 408 LSASRLYGRVDIAVEASKWLIESNQQVAAAYVTMSNTYAMAGKWENVHSIRYEMKHYGVY 467
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREA-IFKKLEELIGQLKGMGYVPET-SLALHDIE 506
K PG SW+EI + + F +G R + + L EL ++K GYV + L D+E
Sbjct: 468 KEPGCSWVEIRDSAYVFYAGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVSIDVE 527
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE KEE + HSE+LAL F +++ + IR+MKN+R+C DCH KL S+++ ++
Sbjct: 528 EEAKEEIVGLHSERLALAFGLIS----IPKGVTIRVMKNLRMCRDCHEAFKLISEIVERD 583
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
VVRD NRFHHF++ C+C D+W
Sbjct: 584 FVVRDVNRFHHFENGSCTCRDFW 606
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 172/336 (51%), Gaps = 32/336 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+AT+ +AC++ +++ ++H H + F + +L V + LI+MY K +DDAR +FD
Sbjct: 131 FATVVNACSMLADLRTGQKIHSH-VEMFGVQC-NLVVCSSLIDMYGKCNNVDDARRVFDG 188
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNEFSLASVLISCDYL----H 121
M RNVVSWT++I+ Y Q+ E +LF L PN F LASV+ +C L
Sbjct: 189 MDYRNVVSWTSMITAYGQNALGECALQLFREFNGLPLSSPNHFMLASVINACASLGRLVS 248
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
GK+ HA ++ +++ VA+AL++MY+K C + KVF + +VI + SMI
Sbjct: 249 GKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIPDPSVIPYTSMIVGAAK 308
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAV 238
L ++++F +M L R+++ P+ TF VL AC +GLV + +
Sbjct: 309 YGLGKFSLDIFKEM--------LDRRIK-----PNDVTFVGVLHACSHSGLVDD-GLEYL 354
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY---HDLVSWNSILKAYALH 295
HS+ K+G DT ++ R G + + Q+ + + W ++L A L+
Sbjct: 355 HSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLY 414
Query: 296 GQ---AKEALQLFSNMNVQPDSATFVSLLSACSHAG 328
G+ A EA + N Q +A +V++ + + AG
Sbjct: 415 GRVDIAVEASKWLIESN-QQVAAAYVTMSNTYAMAG 449
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 92/169 (54%), Gaps = 8/169 (4%)
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + K GF +DT N LI++Y R + + Q+F++M +++S+ S++ + G+
Sbjct: 50 HTNVLKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGRP 109
Query: 299 KEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
K AL +F M V P++ TF ++++ACS ++ G K+ HS +E GV L +
Sbjct: 110 KSALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKI-HSHVEMFGVQCNLVVCSS 168
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
++D+ G+ + +A ++ M + V W+ ++ + +G+ L E A
Sbjct: 169 LIDMYGKCNNVDDARRVFDGMDYR-NVVSWTSMITA---YGQNALGECA 213
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/540 (38%), Positives = 299/540 (55%), Gaps = 27/540 (5%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC 117
L AR +FD + + ++ +I +A + + P+ F+ VL +C
Sbjct: 38 LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKAC 97
Query: 118 DYLHGKL-VHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSM 174
L L +H+L K D+ VYV N LI+ Y C D A KVFE M R+++SW+SM
Sbjct: 98 ARLQTGLDLHSLLFKLGFDSDVYVQNGLIHFYG-CCGFLDFALKVFEEMPERDLVSWSSM 156
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG-MAPDWCTFSIVLKACAGLVTER 233
IA F AK EAL LF+++Q G + PD V+ A + L
Sbjct: 157 IACF-------------AKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLE 203
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+ I++ G E + AL+ ++RCG I S +VFD+M ++++W +++ A
Sbjct: 204 LGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLA 263
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+HG++ EAL++F M QPD TF +L ACSH GLV EG VF S+ +G+ P
Sbjct: 264 VHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLP 323
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HY CMVDLLGR G + EA K + MP+ P+S+IW LLG+C H LAE K+ +
Sbjct: 324 EHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINE 383
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
L+ +V +SN+Y G + + +R M+ R+ K PG S I + + +HEF +G
Sbjct: 384 LDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDN 443
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HPQ E+I + L +I LK +GY P+ S L DIEEE KE L +HSEKLA+ FA+
Sbjct: 444 NHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFAL--- 500
Query: 531 GSLC-RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
LC ++ IR+MKN+RIC DCH FMK ASD+ +EI++RD NRFHHF CSC DYW
Sbjct: 501 --LCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 12/140 (8%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PN 106
L++M+++ G ++++ +FDEM +RNV++WTALI+G A HG + E R+F + + F P+
Sbjct: 227 LVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPD 286
Query: 107 EFSLASVLISCDYLHGKLV-------HALALKFSLDAHVYVANALINMYSKS-CADEAWK 158
+ VL++C HG LV ++ ++ ++ ++++ ++ +EA K
Sbjct: 287 HVTFTGVLVACS--HGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACK 344
Query: 159 VFENMEFR-NVISWNSMIAA 177
+ M R N I W +++ A
Sbjct: 345 FVDGMPIRPNSIIWRTLLGA 364
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS--KQVFDKMTYHDLVSWNSILKA 291
H +H+ + K G + + L+ + A SLS + +FD + + D ++N+I++A
Sbjct: 3 HIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRA 62
Query: 292 YA--LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+A + + V PD TF +L AC+ +Q G + HS+L G
Sbjct: 63 HADSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACAR---LQTGLDL-HSLLFKLGFDSD 118
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ ++ G G + A K+ EMP E D V WS ++ K+G
Sbjct: 119 VYVQNGLIHFYGCCGFLDFALKVFEEMP-ERDLVSWSSMIACFAKNG 164
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 317/565 (56%), Gaps = 31/565 (5%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D F++ LI+ YA G L AR +FDE P +++ W AL+ A + EE +
Sbjct: 112 SDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLADM 171
Query: 100 LQYFFP-NEFSLASVLISCDYLHG---------KLVHALALKFSLDAHVYVANALINMYS 149
+ P + +S A L +C + +HA A++ H +VA LI+ Y+
Sbjct: 172 GRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDCYA 231
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
K A VF M RNV+SW +MI + + AI LF +M +E L
Sbjct: 232 KLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLV------ 285
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
P+ T +L A AG+ +H+ I + GF+ + NAL+ Y +CG +
Sbjct: 286 -----PNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLE 340
Query: 269 LSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSAC 324
+ +FD + + D+VSWN+++ Y +HG EA+Q+F + M V P+ TF+S+L AC
Sbjct: 341 AGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGAC 400
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SHAGLV EG ++F SM++ + V P+ +HYACMVDLLGR G + EA +LI+ M + P +
Sbjct: 401 SHAGLVDEGKRLFESMVD-YNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQV 459
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LLG+CR H AE+A ++L LEP ++ +V +++IY + ++ +++ ++
Sbjct: 460 WGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEE 519
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
+ K PG SWIE++ R+H F S ++PQ E + + E + Q+K GYVP+T L+D
Sbjct: 520 HALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTGAVLYD 579
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
IEEE KE+ L HSEKLA+ F ++N G VIRI KN+R+C DCH+ K S
Sbjct: 580 IEEEEKEKILLGHSEKLAVAFGLINTG----RGEVIRITKNLRLCEDCHSVTKFISKYAE 635
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD NRFHHF+D ICSC DYW
Sbjct: 636 REIIVRDVNRFHHFRDGICSCGDYW 660
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 206/595 (34%), Positives = 317/595 (53%), Gaps = 68/595 (11%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ ++ + ACA +K A Q+H I + D FV + L++MY K + D
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHG--IASVSGFDSDSFVQSSLVHMYIKCNQIRD 167
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--------------------- 99
A +FD M + +VVSW+AL++ YA+ G +E RLF +
Sbjct: 168 AHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNH 227
Query: 100 ---------------LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYV 140
L+ F P+ +++SVL + D + G L+H +K L + V
Sbjct: 228 SGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCV 287
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE- 198
++ALI+MY K SC E +VF+ M+ +V S N+ I ++ LF ++K++
Sbjct: 288 SSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGM 347
Query: 199 ---------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
EAL LFR++Q G+ P+ T +L AC + H A
Sbjct: 348 ELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKA 407
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H + G D + +ALI YA+CG I S+ FD + +LV WN+++ YA+HG+
Sbjct: 408 AHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGK 467
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
AKEA+++F M +PD +F +LSACS +GL +EG+ F+SM +G+ +++HYA
Sbjct: 468 AKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYA 527
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMV LL R G++ +A +IR MP+ PD+ +W LL SCR H L E+AA KL +LEP
Sbjct: 528 CMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS 587
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ ++ +SNIY G +N+ +R MK +RK PG SWIE++N+VH +G K HPQ
Sbjct: 588 NPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQ 647
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
I + L++L ++K +GY PE + L D+EE+ KE+ L HSEKLA+VF ++N
Sbjct: 648 MTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLN 702
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 188/448 (41%), Gaps = 70/448 (15%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++ Q Q H H++ D + L++ YA DA + D +P+ NV S++ L
Sbjct: 28 SLSQTRQAHAHILKT--GLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTL 85
Query: 80 ISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHG----KLVHALALKFSL 134
I +++ F +L + P+ L S + +C L + VH +A
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 135 DAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
D+ +V ++L++MY K + +A +VF+ M +V+SW++++AA+ +A LF++
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205
Query: 194 MKNE----------------------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
M + EA+ +F + G PD T S VL A L
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD---------- 281
+H + K G D +++ALI Y +C S QVFD+M + D
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 282 -------------------------LVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
+VSW S++ + +G+ EAL+LF M V+P+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPN 385
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
S T LL AC + + G K H G+ + + ++D+ + GRI +
Sbjct: 386 SVTIPCLLPACGNIAALMHG-KAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICF 444
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLA 401
+P + + V W+ ++ HG+ + A
Sbjct: 445 DGIPTK-NLVCWNAVIAGYAMHGKAKEA 471
>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
Length = 637
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 209/599 (34%), Positives = 323/599 (53%), Gaps = 34/599 (5%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ YA+L CA + LHE + + F+ N LI MY G +D A+ F
Sbjct: 58 ETYASLLRQCASARALDLGQLLHEEIARRRFDGYT--FLGNTLITMYGSCGDVDRAKKAF 115
Query: 66 DEMPKRN-VVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL--- 120
D + RN VSW ++I+GYAQ+ ++E +LF ++ LQ F PN+ + S L + L
Sbjct: 116 DRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGAL 175
Query: 121 -HGKLVHALALKFSLDAHVYVANALINMYSKS--CAD----EAWKVFENMEFRNVISWNS 173
G +H L+ + VA ALIN + K C + +F+ M R+ +SW++
Sbjct: 176 PEGSAIHEEVLEHDCETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWST 235
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
++ A+ A+ ++ LF+++ EG P TF V+ AC L R
Sbjct: 236 LVGAY-------------AQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALR 282
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+HS I + D V+ N +++ + RCGS+ S F +M D VSW+ ++ A+A
Sbjct: 283 EGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAFA 342
Query: 294 LHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G EAL+ F MN+ PD TFVS+LS C+HAGL+++ M+ ++ +VP L
Sbjct: 343 HNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDARGHLVDMVGDYALVPGL 402
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
DHY C+VDLL R GR+ AE+L+ MP EP W LL +C+ G+ +
Sbjct: 403 DHYVCLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKMQGDLKRGARVGKSFLA 462
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
+P S + +S+IY + N+ R++RK M+ ++K G S+IE+ +RVHEF +G
Sbjct: 463 TDPDTSAPYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCSYIEVHDRVHEFKAGEV 522
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HP+ I +L ++ ++ G V +T L +D+EEE KE L +HSEKLA+ ++
Sbjct: 523 SHPRHRDILYELMQIQRKMVEAGCVRDTRLVSYDLEEEEKENLLTYHSEKLAIGLGLVTT 582
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R + +R++KN+R+C DCH +K S + G+ IVVRD NRFHHF+D +CSCNDYW
Sbjct: 583 ----RPGTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHHFEDGVCSCNDYW 637
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T++ +L+ CA +H IA+ F+ T + N LI Y CG + +K+
Sbjct: 55 PDLETYASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKKA 114
Query: 274 FDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGL 329
FD++ + ++ VSWNS++ YA + +KEAL+LF M++ QP+ TFVS L A + G
Sbjct: 115 FDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGA 174
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV-----GRILEAEKLIREMPMEPDSVI 384
+ EG+ + +LE H +++ G+ G + + + M + D V
Sbjct: 175 LPEGSAIHEEVLE-HDCETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRM-RDRDDVS 232
Query: 385 WSVLLGS 391
WS L+G+
Sbjct: 233 WSTLVGA 239
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 213/612 (34%), Positives = 321/612 (52%), Gaps = 71/612 (11%)
Query: 35 FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
P+ P V LI YA L AR + D P R V + L+ G +
Sbjct: 47 LPSHPASAAVRVKLIQAYAACAALPAARAVLDASPDRTTVFFNVLLRGLTAASLHRDALL 106
Query: 95 LFCSLL---QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINM 147
LF S+ FP+ ++ L SC + G+ +H+ + LD +V+VA++ I+M
Sbjct: 107 LFASMRPQGHACFPDHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISM 166
Query: 148 YSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE----------------- 189
Y++ D+A+++FE M++R+V+SWN+MI+ F L +A++
Sbjct: 167 YARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGT 226
Query: 190 ---------------------LFAKMK---------------NEE---EALFLFRQLQRE 210
+F +M+ N E EA+ LF ++Q++
Sbjct: 227 MASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKD 286
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
G+ PD T + VL +C + +H +I + ++ NAL+ YA CG + +
Sbjct: 287 GIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEA 346
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+ VFD M D+VSW SI+ AY HG +EA+ LF M ++PDS FV++L+ACSHA
Sbjct: 347 RDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHA 406
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
GL+ G F+SM + P+L+HYACMVDLLGR G I EA I MP++P+ +W
Sbjct: 407 GLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGA 466
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LLG+CR H + LAA L +L P + +V +SNIY +G + ++R M+ +
Sbjct: 467 LLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGI 526
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
+K PG+S E+ +RVH F G HPQ + I+KKL EL+ +++ MGY PE LHD+EE
Sbjct: 527 KKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEE 586
Query: 508 EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEI 567
E KE L HSEKLA+ F ++N + IRI N+R C DCH+ KL S + G+EI
Sbjct: 587 EDKEGHLSVHSEKLAIAFLLINTNP----GTPIRITMNLRTCSDCHHAAKLISTIAGREI 642
Query: 568 VVRDSNRFHHFK 579
+++D NR H+ K
Sbjct: 643 ILKDVNRIHYMK 654
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 213/607 (35%), Positives = 334/607 (55%), Gaps = 36/607 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA +++ +++ I N E DL V+ L++MY K +D A+ LFDE
Sbjct: 242 VISACAKLEDLETGEKVYA-FIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLV 125
N+ A+ S Y + G E +F ++ P+ S+ S + SC L GK
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 126 HALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
H L+ ++ + NALI+MY K C D A+++F+ M + V++WNS++A +
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMK-CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 184 EAQAIELFAKMKNE------------------EEALFLFRQLQ-REGMAPDWCTFSIVLK 224
A E F M + EEA+ +F +Q +EG+ D T +
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
AC L A ++ I K G + D + L+ ++RCG + +F+ +T D+ +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W + + A A+ G A+ A++LF +M ++PD FV L+ACSH GLVQ+G ++F+SML
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ HGV P+ HY CMVDLLGR G + EA +LI +MPMEP+ VIW+ LL +CR G +A
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
AA K++ L P + +V +SN+Y +G +N +R MK +RK PG S I+I +
Sbjct: 659 AYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGK 718
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
HEF SG + HP+ I L+E+ + +G+VP+ S L D++E+ K L HSEKL
Sbjct: 719 THEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKL 778
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
A+ + +++ + + IRI+KN+R+C DCH+F K AS + +EI++RD+NRFH+ +
Sbjct: 779 AMAYGLISS----NKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQG 834
Query: 582 ICSCNDY 588
CSC D+
Sbjct: 835 KCSCGDF 841
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 168/342 (49%), Gaps = 23/342 (6%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
ACA +Q+H ++ +DLFV N L++ YA+ G LD AR +FDEM +R
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVK--MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYLHGKLV 125
NVVSWT++I GYA+ A++ LF ++ + PN ++ V+ +C D G+ V
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
+A ++ + + +AL++MY K A D A ++F+ N+ N+M +
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN------- 311
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ + EAL +F + G+ PD + + +C+ L + H + +
Sbjct: 312 ------YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GFE I NALI Y +C + ++FD+M+ +V+WNSI+ Y +G+ A +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 305 FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
F M + + ++ +++S L +E +VF SM GV
Sbjct: 426 FETMP-EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 23/262 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALI----NMYSKSCADEAWKVFENME-FRNVISWNSMIAA 177
K+ H K LD V L+ + ++ A +VFEN E + +NS+I
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ + L +AI LF +M N G++PD TF L ACA + +
Sbjct: 109 YASSGLCNEAILLFLRMMNS-------------GISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H LI K G+ D + N+L+H YA CG + +++VFD+M+ ++VSW S++ YA
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
AK+A+ LF M V P+S T V ++SAC+ ++ G KV+ + + N G+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMV 274
Query: 354 ACMVDLLGRVGRILEAEKLIRE 375
+ +VD+ + I A++L E
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDE 296
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 204/596 (34%), Positives = 335/596 (56%), Gaps = 37/596 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
YA + AC+ + +H+H++ + F N + V N LI MYAK G L D++ LF
Sbjct: 173 YAAILGACSSPDFLLDGKHIHKHILESKHFGN----ISVRNALITMYAKCGSLKDSKSLF 228
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLF---CSLLQYFFPNEFSLASVLISC----D 118
M ++VVSW A+I+ Y +G+ ++ F LF C+L P+ ++ +S+L +C
Sbjct: 229 LTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHT--PDIYTFSSILGACASPKR 286
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAA 177
G+++H D + N LI+M+++ + + A + F ++E + + +WN+M+AA
Sbjct: 287 LEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAA 346
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ A+ ++ALFL++ + EG PD TFS V+ +CA L R
Sbjct: 347 Y-------------AQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKF 393
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H GFE D ++ AL++ YA+CGS++ +K+ FD ++ D+VSW++++ A A HG
Sbjct: 394 IHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGH 453
Query: 298 AKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A+EAL+L MN+Q + T S+L ACSH G + EG F + ++ G+ ++
Sbjct: 454 AEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTV 513
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
+DLLGR G + EAE ++ MP + V LLG C+ HG+ R + ++ LEP
Sbjct: 514 GFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPE 573
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
+ +V ++N+Y +G ++ +R+ M+ V++ G S IE ++++EF+ G +P+
Sbjct: 574 NPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPR 633
Query: 475 REAIFKKLEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
I +LE L ++K GYVP+T HD+ ++ KEE L HSEK+A+ F ++
Sbjct: 634 NLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPP- 692
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S +RI+KN+R+C DCH KLAS + G+ I+VRD RFHHF+ ICSC DYW
Sbjct: 693 ---GSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 30/344 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D F+ N +I MY K +DAR +FD + +RN SW+ L+ Y Q+ +E ++ ++
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 101 QYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ + ++L+SVL +C D G++V A + + V VA +LI++++K C +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 155 EAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
EA VF +M R++IS +MI A + + + AL + +++ +G+
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGA-------------YVRHGKNDLALDTYWKMRSQGLE 167
Query: 214 PDWCTFSIVLKACAG---LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
PD T++ +L AC+ L+ +H +H I + + + NALI YA+CGS+ S
Sbjct: 168 PDAFTYAAILGACSSPDFLLDGKH---IHKHILESKHFGNISVRNALITMYAKCGSLKDS 224
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHA 327
K +F M D+VSWN+++ AY L+G K+A LF M PD TF S+L AC+
Sbjct: 225 KSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASP 284
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
+++G ++ H + G ++ + R G + A +
Sbjct: 285 KRLEDG-RMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARR 327
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 135/269 (50%), Gaps = 20/269 (7%)
Query: 138 VYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
++AN +I MY K ++A +VF+ ++ RN SW+ ++ E + +
Sbjct: 2 TFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILV-------------ECYVQNAM 48
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
+EAL +++++ R+ ++ D T S VL AC L+ V + GFE D V+A +
Sbjct: 49 YQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATS 108
Query: 257 LIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---P 312
LIH +A+CG + ++ VF M D++S +++ AY HG+ AL + M Q P
Sbjct: 109 LIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEP 168
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D+ T+ ++L ACS + +G + +LE+ + ++ + + G + +++ L
Sbjct: 169 DAFTYAAILGACSSPDFLLDGKHIHKHILESKH-FGNISVRNALITMYAKCGSLKDSKSL 227
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLA 401
M ++ D V W+ ++ + +G + A
Sbjct: 228 FLTMDVK-DVVSWNAMIAAYTLYGHDKDA 255
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
DT +AN +I Y +C S ++QVFD++ + SW+ +++ Y + +EAL+++ M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+ D+ T S+L+AC+ V+EG V E G + ++ L + G +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMV-QRKAEELGFEKDVVVATSLIHLFAKCGCL 119
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEP 413
EAE + R M D + + ++G+ +HG+ LA K++ LEP
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEP 168
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 212/595 (35%), Positives = 324/595 (54%), Gaps = 26/595 (4%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVT---NHLINMYAKFGYLDDARHLF 65
+ +AC+ N Q+H + I + L +T N L MYAK G L+ A F
Sbjct: 183 GAMLNACSASNNADLGSQVHGYTIKY-----RALSITSIGNSLCRMYAKSGSLESAMRAF 237
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEEC-FRLFCSLL-QYFFPNEFSLASVLISC----DY 119
+P +NV++WT +IS A+ N E LF +L PNEF+L SV+ C D
Sbjct: 238 RMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDL 297
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIAAF 178
GK V A K ++ V N+ + +Y K DEA + FE M+ ++I+WN+MI+ +
Sbjct: 298 NLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGY 357
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
A +E +L A+ + + AL +FR L+R M PD TFS +L C+ ++ +
Sbjct: 358 -AQIMETAKDDLHARSRGFQ-ALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQI 415
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ K GF D V+ +AL++ Y +CG I + + F +M+ LV+W S++ Y+ HG+
Sbjct: 416 HAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRP 475
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EA+QLF +M V+P+ TFV +LSACS+AGL ++ F M E + + P +DHY C
Sbjct: 476 QEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGC 535
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVD+ R+GR+ +A IR EP+ IWS L+ CR HG LA AA +L +L P
Sbjct: 536 MVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKG 595
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+V + N+Y + ++ +RK MK + SWI I+++V+ F + K H
Sbjct: 596 IETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELS 655
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE--QLYHHSEKLALVFAIMNQGSL 533
+ +++ LE L+ + K +GY P S L D E++ K + HHSE+LA+ ++
Sbjct: 656 DELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQT--- 712
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ +R+ KNI +C DCH+ +K S L +EIVVRDS R H FKD CSC D+
Sbjct: 713 -PPGATVRVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 209/417 (50%), Gaps = 36/417 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ +Y L H C G++ A LH HM+ D+FV L+N Y + G DAR L
Sbjct: 78 SAMYVPLLHVCVETGSLGGARALHGHMVKT--GTSADMFVATSLVNAYMRCGASQDARSL 135
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLH-- 121
FD+MP++NVV+WTALI+GY + E +F +L+ +P+ ++L ++L +C +
Sbjct: 136 FDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNA 195
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
G VH +K+ + + N+L MY+KS + + A + F + +NVI+W +MI+
Sbjct: 196 DLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMIS-- 253
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
AC + EL L LF + +G+ P+ T + V+ C + V
Sbjct: 254 -ACAEDENYTEL---------GLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQV 303
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA----- 293
+ K G + + + N+ ++ Y R G + + F++M +++WN+++ YA
Sbjct: 304 QAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMET 363
Query: 294 ----LHGQAK--EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
LH +++ +AL++F N+ ++PD TF S+LS CS +++G ++ H+
Sbjct: 364 AKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQI-HAQTIKT 422
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
G + + + +V++ + G I +A K EM + V W+ ++ +HG + A
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIR-TLVTWTSMISGYSQHGRPQEA 478
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
REG + +L C + A A+H + K G D +A +L++AY RCG+
Sbjct: 71 REGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQ 130
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
++ +FD+M ++V+W +++ Y ++ Q EAL++F M P T ++L+ACS
Sbjct: 131 DARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACS 190
Query: 326 HAGLVQEGNKVFHSMLENHGV-VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ G++V ++ + + + + C + + G + A + R +P + + +
Sbjct: 191 ASNNADLGSQVHGYTIKYRALSITSIGNSLCR--MYAKSGSLESAMRAFRMVP-DKNVIT 247
Query: 385 WSVLLGSC 392
W+ ++ +C
Sbjct: 248 WTTMISAC 255
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 220/636 (34%), Positives = 338/636 (53%), Gaps = 72/636 (11%)
Query: 20 NIKQAMQLHE----HMINNFPNEPQDLFVTNHLINMYAK--FGYLDDARHLFDEMPKRNV 73
N K + LH H + QD +V+ L+ YA F L+ A +F+ +P NV
Sbjct: 36 NTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNV 95
Query: 74 VSWTALISGYAQHGNAEECFRLFC---SLLQYFFPNEFSLASVLISCDYLH----GKLVH 126
+ +I G Q N E C + C ++ + PN+F+ ++ +C G VH
Sbjct: 96 FVFNIIIKGCLQ--NNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVH 153
Query: 127 ALALKFSLDAHVYVANALINMYSK------------------------------SCAD-- 154
A +K L V++ +A I MY C +
Sbjct: 154 AHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVE 213
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE----------------- 197
A ++F +ME +NV SWN M++ C + +A ELF +MK +
Sbjct: 214 AAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGY 273
Query: 198 -EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
+EAL +F +QRE + P S VL ACA L +H+ + D V+ A
Sbjct: 274 YKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTA 333
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PD 313
L+ YA+CG + ++ VF+KM ++ +WN+++ +HG+A++A++LF M Q P+
Sbjct: 334 LVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPN 393
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T + +LSAC+H+G+V EG ++F+SM E +G+ P ++HY C+VDLLGR G + EAE+++
Sbjct: 394 GITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVM 453
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
MPMEP + +W LLG+CRKHG+ L E L +LEP +S + +SNIY +G ++
Sbjct: 454 YSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWD 513
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
+RK MK V+ G+S I+ + VHEF G HPQ + I+ L+ +I +LK G
Sbjct: 514 DVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEG 573
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
+ P TS L DIEEE KE +L +HSEKLA+ F ++N + + I ++KN+R+C DCH
Sbjct: 574 FSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINT----KPGTTIHVVKNLRMCEDCH 629
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ KL S + +EI+VRD R+HHFK CSC D+W
Sbjct: 630 SAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +++ ACA G + Q +H ++ NN + D + L++MYAK G LD A +F+
Sbjct: 295 VLSSVLAACANLGALDQGRWIHAYVNNN--SNSFDAVLGTALVDMYAKCGRLDMAWDVFE 352
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC 117
+M K+ V +W A+I G HG AE+ LF + Q F PN +L VL +C
Sbjct: 353 KMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSAC 404
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 208/600 (34%), Positives = 336/600 (56%), Gaps = 27/600 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + + HAC+ ++K Q H ++I + D V + L ++Y+K G L+DA
Sbjct: 167 SVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDF--DASVGSALCSLYSKCGRLEDALK 224
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH- 121
F + ++NV+SWT+ +S A +G + RLF ++ PNEF+L S L C +
Sbjct: 225 TFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILS 284
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAA 177
G V++L +KF ++++ V N+L+ +Y KS C EA ++F M+ ++++WN+MIA
Sbjct: 285 LELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAG 344
Query: 178 FRACKLEAQAIEL----FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
AQ +EL + EAL LF +L GM PD T S VL C+ ++
Sbjct: 345 ------HAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIE 398
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H+ K GF D +++ +LI Y++CGSI + + F +M+ +++W S++ ++
Sbjct: 399 QGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFS 458
Query: 294 LHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
HG +++AL +F +M+ V+P++ TFV +LSACSHAG+V + F M + + + P +
Sbjct: 459 QHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAM 518
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
DHY CMVD+ R+GR+ +A I++M EP IWS + C+ HG L AA +L
Sbjct: 519 DHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLS 578
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
L+P D +V + N+Y + F +RK M+ +V K SWI I+++V+ F + GK
Sbjct: 579 LKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGK 638
Query: 471 RHPQREAIFKKLEELIGQLKGMGY--VPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HPQ I K LE+L+ ++K +GY + ++ + EEE +HSEKLA+ F +
Sbjct: 639 THPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHSEKLAITFGLE 698
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
N S IR++K+ IC D HNF+K S L G+EI+V+DS R H F + CSC ++
Sbjct: 699 N----LPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGECSCGNF 754
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 207/415 (49%), Gaps = 39/415 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L C + + +H H++ ++ + FV + L+N+YAK G ++DAR +FD
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHD--NFFVMSFLVNVYAKCGNMEDARRVFDN 127
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----G 122
M +RNVV+WT L+ G+ Q+ + +F +L +P+ ++L++VL +C L G
Sbjct: 128 MLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG 187
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
HA +K+ +D V +AL ++YSK C ++A K F + +NVISW S ++A
Sbjct: 188 DQFHAYIIKYHVDFDASVGSALCSLYSK-CGRLEDALKTFSRIREKNVISWTSAVSACAD 246
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ + LF +M + + P+ T + L C +++ + V+S
Sbjct: 247 NGAPVKGLRLFVEMIAVD-------------IKPNEFTLTSALSQCCEILSLELGTQVYS 293
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ--- 297
L K+G+E + + N+L++ Y + G I + ++F++M +V+WN+++ +A +
Sbjct: 294 LCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTK 353
Query: 298 --------AKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
EAL+LFS +N+ +PD T S+LS CS +++G ++ H+ G
Sbjct: 354 DNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQI-HAQTIKTGF 412
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + ++ + + G I A K EM + W+ ++ +HG ++ A
Sbjct: 413 LSDVIVSTSLISMYSKCGSIERASKAFLEMSTRT-MIAWTSMITGFSQHGMSQQA 466
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 26/303 (8%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMI 175
Y ++VH +K + +V + L+N+Y+K C ++A +VF+NM RNV++W +++
Sbjct: 82 SYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAK-CGNMEDARRVFDNMLRRNVVAWTTLM 140
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
F + + A+ +F+++ G P T S VL AC+ L + +
Sbjct: 141 VGF-------------VQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG 187
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
H+ I KY + D + +AL Y++CG + + + F ++ +++SW S + A A +
Sbjct: 188 DQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADN 247
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G + L+LF M +++P+ T S LS C ++ G +V+ S+ G L
Sbjct: 248 GAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVY-SLCIKFGYESNLRV 306
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
++ L + G I+EA +L M + V W+ ++ G ++ EL L
Sbjct: 307 RNSLLYLYLKSGCIVEAHRLFNRMD-DASMVTWNAMIA-----GHAQMMELTKDNLSACH 360
Query: 413 PGD 415
G
Sbjct: 361 RGS 363
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/548 (36%), Positives = 309/548 (56%), Gaps = 29/548 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQ 101
+ N L++MY K G + ++R + +MP+R+VV+W ALI GYA+ + ++ F ++ ++
Sbjct: 381 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 440
Query: 102 YFFPNEFSLASVLISC----DYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD-- 154
N ++ SVL +C D L GK +HA + ++ +V N+LI MY+K C D
Sbjct: 441 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK-CGDLS 499
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ +F ++ RN+I+WN+M+AA A + EE L L +++ G++
Sbjct: 500 SSQDLFNGLDNRNIITWNAMLAAN-------------AHHGHGEEVLKLVSKMRSFGVSL 546
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D +FS L A A L +H L K GFE D+ I NA Y++CG I ++
Sbjct: 547 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 606
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
L SWN ++ A HG +E F M ++P TFVSLL+ACSH GLV
Sbjct: 607 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 666
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G + + + G+ P ++H C++DLLGR GR+ EAE I +MPM+P+ ++W LL S
Sbjct: 667 KGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 726
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ HG AA L +LEP D +V SN++ +G + +RK+M ++K
Sbjct: 727 CKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 786
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
SW++++++V F G + HPQ I+ KLE++ +K GYV +TS AL D +EE KE
Sbjct: 787 ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKE 846
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L++HSE+LAL +A+M+ E S +RI KN+RIC DCH+ K S ++G+ IV+RD
Sbjct: 847 HNLWNHSERLALAYALMS----TPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRD 902
Query: 572 SNRFHHFK 579
RFHHF+
Sbjct: 903 QYRFHHFE 910
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 204/398 (51%), Gaps = 27/398 (6%)
Query: 4 STQIYATLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
S+ + A+L AC G++ ++ +Q+H + + D++V+ ++++Y +G + +R
Sbjct: 40 SSFVIASLVTACGRSGSMFREGVQVHGFVAKS--GLLSDVYVSTAILHLYGVYGLVSCSR 97
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH 121
+F+EMP RNVVSWT+L+ GY+ G EE ++ + + NE S++ V+ SC L
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNSMIA 176
G+ + +K L++ + V N+LI+M S D A +F+ M R+ ISWNS+ A
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A +A+ + EE+ +F ++R + T S +L + ++
Sbjct: 218 A-------------YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H L+ K GF+ + N L+ YA G + VF +M DL+SWNS++ ++ G
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 297 QAKEALQLFSNMNVQPDS---ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
++ +AL L +M S TF S L+AC ++G ++ H ++ G+
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIG 383
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+V + G++G + E+ +++ +MP D V W+ L+G
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGG 420
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 25/365 (6%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V N LI+M G +D A ++FD+M +R+ +SW ++ + YAQ+G+ EE FR+F SL++
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF-SLMR 236
Query: 102 YFFPNEFS-----LASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
F S L SVL D+ G+ +H L +K D+ V V N L+ MY+ +
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA VF+ M +++ISWNS++A+F A+ L M + G +
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-------------SGKSV 343
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
++ TF+ L AC +H L+ G + +I NAL+ Y + G +S S++V
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA---TFVSLLSACSHAGLVQ 331
+M D+V+WN+++ YA +AL F M V+ S+ T VS+LSAC G +
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
E K H+ + + G ++ + + G + ++ L + + + W+ +L +
Sbjct: 464 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 522
Query: 392 CRKHG 396
HG
Sbjct: 523 NAHHG 527
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 186/395 (47%), Gaps = 52/395 (13%)
Query: 68 MPKRNVVSWTALISGYAQHG---NAEECFRLFCSLLQYFFPNEFSLASVLISCD-----Y 119
MP RN VSW ++SG + G E FR C L P+ F +AS++ +C +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL--GIKPSSFVIASLVTACGRSGSMF 58
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK----SCADEAWKVFENMEFRNVISWNSMI 175
G VH K L + VYV+ A++++Y SC+ KVFE M RNV+SW S++
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR---KVFEEMPDRNVVSWTSLM 115
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+ + EE + +++ ++ EG+ + + S+V+ +C L E
Sbjct: 116 VGY-------------SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 162
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+ + K G E + N+LI G++ + +FD+M+ D +SWNSI AYA +
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 296 GQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL-- 350
G +E+ ++FS M + +S T +LLS H + G + HG+V ++
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI-------HGLVVKMGF 275
Query: 351 DHYACMVDLLGRV----GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
D C+ + L R+ GR +EA + ++MP + D + W+ L+ S G R +
Sbjct: 276 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDG--RSLDALGL 332
Query: 407 KLKQLEPGDSLGFVQMSNIY--CLSGS-FNKARLI 438
+ G S+ +V ++ C + F K R++
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 39/328 (11%)
Query: 10 TLFHACALHGNI-KQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ AC L G++ ++ LH ++++ D V N LI MYAK G L ++ LF+ +
Sbjct: 451 SVLSACLLPGDLLERGKPLHAYIVS--AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 508
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLF-------CSLLQYFFPNEFSLASVLISCDYLH 121
RN+++W A+++ A HG+ EE +L SL Q+ F S A+ L +
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE--E 566
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +H LA+K + ++ NA +MYSK C + E K+ R++ SWN +I+A
Sbjct: 567 GQQLHGLAVKLGFEHDSFIFNAAADMYSK-CGEIGEVVKMLPPSVNRSLPSWNILISA-- 623
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASA 237
+ EE F ++ G+ P TF +L AC+ GLV + A
Sbjct: 624 -----------LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDK--GLA 670
Query: 238 VHSLIAK-YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYAL 294
+ +IA+ +G E +I R G ++ ++ KM +DLV W S+L + +
Sbjct: 671 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLASCKI 729
Query: 295 HG---QAKEALQLFSNMNVQPDSATFVS 319
HG + ++A + S + + DS +S
Sbjct: 730 HGNLDRGRKAAENLSKLEPEDDSVYVLS 757
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 208/597 (34%), Positives = 334/597 (55%), Gaps = 21/597 (3%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + +AC+ +I+ Q+H ++I + D + N L + Y+KF L+ A
Sbjct: 158 SNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDF--DTSIGNSLSSFYSKFRRLEFAIK 215
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH- 121
F + +++V+SWT++IS +G A F +L PNE++L SVL +C +
Sbjct: 216 AFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLT 275
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G +H+L++K + + + N+++ +Y K C EA K+FE ME N+++WN+MIA
Sbjct: 276 LDLGAQIHSLSIKLGYGSSILIKNSIMYLYLK-CGWLIEAQKLFEGMETLNLVTWNAMIA 334
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
K+ A + A K+ AL +F++L R GM PD TFS VL C+ LV
Sbjct: 335 GH--AKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGE 392
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H I K G D V+ AL+ Y +CGSI + + F +M ++SW S++ +A HG
Sbjct: 393 QIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHG 452
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+++ALQLF +M ++P+ TFV +LSACSHAGL E F M + + + P +DH+
Sbjct: 453 LSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHF 512
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
AC++D+ R+GR+ EA ++ +M EP+ IWS+L+ CR HG++ L AA +L +L+P
Sbjct: 513 ACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKP 572
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
D +V + N++ +G + +RK MK +V K SWI I+ +V+ F K H
Sbjct: 573 KDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHC 632
Query: 474 QREAIFKKLEELIGQLKGMGYVP--ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
Q ++K LE ++ ++K +GY P + + + EE HSEKLA+ F ++N
Sbjct: 633 QSLEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLP 692
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ + IR++K+I +C DCHNF++ S L G+EIV+RDS + H F + CSC Y
Sbjct: 693 T----ATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 213/414 (51%), Gaps = 37/414 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L C +A +H H++ +E DLFV L+N+Y+K G ++ A +FD
Sbjct: 61 YFPLLQECIDRNLATEARMIHGHIVKTGFHE--DLFVMTFLVNVYSKCGVMESAHKVFDN 118
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----G 122
+P+RNV +WT L++GY Q+ + +LF +L+ +P+ ++L VL +C L G
Sbjct: 119 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 178
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRAC 181
K VHA +K+ +D + N+L + YSK E A K F+ ++ ++VISW S+I+ +C
Sbjct: 179 KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS---SC 235
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
QA +L F + +GM P+ T + VL AC ++T + +HSL
Sbjct: 236 CDNGQA----------ARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSL 285
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY--------- 292
K G+ +I N++++ Y +CG + ++++F+ M +LV+WN+++ +
Sbjct: 286 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAED 345
Query: 293 --ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
A H AL +F + ++PD TF S+LS CS+ +++G ++ H + GV+
Sbjct: 346 DVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQI-HGQIIKSGVL 404
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ +V + + G I +A K EMP + W+ ++ +HG ++ A
Sbjct: 405 ADVVVGTALVSMYNKCGSIDKASKAFLEMP-SRTMISWTSMITGFARHGLSQQA 457
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 139/299 (46%), Gaps = 24/299 (8%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
+++H +K ++V L+N+YSK + A KVF+N+ RNV +W +++ +
Sbjct: 77 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A++LF KM G P T IVL AC+ L + VH+
Sbjct: 137 NSHPLLALQLFIKM-------------LEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 183
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ KY + DT I N+L Y++ + + + F + D++SW S++ + +GQA
Sbjct: 184 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 243
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
+L F +M ++P+ T S+LSAC + G ++ HS+ G + ++
Sbjct: 244 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI-HSLSIKLGYGSSILIKNSIM 302
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
L + G ++EA+KL M + V W+ ++ G ++ +LA + + G +
Sbjct: 303 YLYLKCGWLIEAQKLFEGME-TLNLVTWNAMIA-----GHAKMMDLAEDDVAAHKSGST 355
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/571 (34%), Positives = 316/571 (55%), Gaps = 33/571 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFP 105
L++ YAK L D R LFDE P+R++ +++L++ + + E L +L P
Sbjct: 44 LVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRP 103
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ F LAS+ + L GK +H + + V ++LI+MY K D+A KVF
Sbjct: 104 DHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVF 163
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EALF 202
+++ +N + W ++I+ + +A+ELF M A+
Sbjct: 164 DSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVK 223
Query: 203 LFRQLQREGMA-PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
LF ++R+G++ D S + A L +HSL + GF ++ NA++ Y
Sbjct: 224 LFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMY 283
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
++C I +++VF+++T D++SW ++L A HG+A+EA L+ M V+P+ TFV
Sbjct: 284 SKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFV 343
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
L+ ACSHAGLVQ+G ++F SM +G+ P+L HY C +DLL R G + EAE+LI MP
Sbjct: 344 GLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPY 403
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
PD W+ LL +C+K+ ++ A L +L P +V +SN+Y ++G ++ +
Sbjct: 404 VPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTV 463
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
RK M +RK PG SWIE+ F +G RE I LEEL+ +++ GYVP+T
Sbjct: 464 RKLMADMEIRKEPGYSWIEVGREFRLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDT 523
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
S +HD+EE KE L HSE+LA+ F I+ SVIR++KN+R+C DCH MK
Sbjct: 524 SSVMHDLEEHEKEHHLCLHSERLAVAFGILRSPL----GSVIRVVKNLRVCNDCHTVMKF 579
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S++ ++I+VRD++RFHHF+ CSC+++W
Sbjct: 580 ISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 169/377 (44%), Gaps = 89/377 (23%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ A++ A A ++ QLH H + + P D+ V + LI+MY K G DDAR +FD
Sbjct: 107 VLASIASATARLRSLCLGKQLHGHFVAS-PYSSDDV-VKSSLIDMYCKCGVPDDARKVFD 164
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF-----------CSLLQYFFPNEFSLASVLI 115
+ +N V WTALISGY +G ++E LF +L+ F + S+++V +
Sbjct: 165 SIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKL 224
Query: 116 SCD--------------------------YLHGKLVHALALKFSLDAHVYVANALINMYS 149
D ++ G+ +H+L ++ + + V NA+++MYS
Sbjct: 225 FVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYS 284
Query: 150 KSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K C+D A +VFE + R++ISW +M+ EAQ EEA L+ ++
Sbjct: 285 K-CSDIHSAREVFEEITGRDIISWTTMLVG------EAQ-------HGRAEEAFSLYDRM 330
Query: 208 QREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
G+ P+ TF ++ AC AGLV ++ S+ +YG N + Y
Sbjct: 331 VLAGVKPNEVTFVGLIYACSHAGLV-QKGRQLFDSMKGEYGI-------NPRLQHYT--- 379
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACS 325
Y DL+S + G EA +L + M PD AT+ SLLSAC
Sbjct: 380 ------------CYLDLLSRS---------GHLAEAEELITTMPYVPDEATWASLLSACK 418
Query: 326 HAGLVQEGNKVFHSMLE 342
+ +V ++LE
Sbjct: 419 KYNNAEMSIRVADNLLE 435
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/597 (35%), Positives = 338/597 (56%), Gaps = 33/597 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLD 59
F+ + + CA G +++ Q+H ++ F D FV + L++MY+K G ++
Sbjct: 110 FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFG---VDKFVLSSLVSMYSKCGEIE 166
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCD 118
R +FD M ++VVSW +LI GYA+ G E +F + P + S + ++LI
Sbjct: 167 LCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEM-----PEKDSFSWTILIDGL 221
Query: 119 YLHGKLVHALALKFSLDAHVYVA-NALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIA 176
GKL A + + V+ NA+IN Y K+ ++ A ++F+ M R++++WNSMI
Sbjct: 222 SKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMIT 281
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ + K +AL LF + RE ++P++ T + A +G+V+
Sbjct: 282 GYE-------------RNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGR 328
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VHS I K GF+ D V+ LI Y++CGS+ + +VF + L W S++ +HG
Sbjct: 329 WVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHG 388
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
++ L+LF M ++P + TF+ +L+ACSHAG ++ ++ F M ++G+ P ++HY
Sbjct: 389 LVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHY 448
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C++D+L R G + EA+ I MP++ + VIW+ LL RKHG R+ E AA L L P
Sbjct: 449 GCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAP 508
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+ +V +SN+Y +G + K R +R+ MK ++K PG S IE + +HEF G K HP
Sbjct: 509 DTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHP 568
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGS 532
Q E I+ KL E+ +L G++P+T+ L +EE++ KE +L HSE+LA+ F ++N
Sbjct: 569 QTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLN--- 625
Query: 533 LCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ S IRI+KN+RIC DCH KL S + +EI++RD +RFHHFK CSC D+W
Sbjct: 626 -IKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 34/382 (8%)
Query: 19 GNIKQAMQLHEHMINNFP-NEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVS 75
G ++A QLH I N P V++ L+ +YA + L A LFD + + +VS
Sbjct: 26 GTEREANQLHALSIKTASLNHPS---VSSRLLALYADPRINNLQYAHSLFDWIQEPTLVS 82
Query: 76 WTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL----HGKLVHALALK 131
W LI Y ++ + + LFC LL F P+ F+L VL C L GK +H L LK
Sbjct: 83 WNLLIKCYIENQRSNDAIALFCKLLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLK 142
Query: 132 FSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+V ++L++MYSK E KVF+ ME ++V+SWNS+I + C A+E+
Sbjct: 143 IGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEM 202
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
F +M + D +++I++ GL A + + +
Sbjct: 203 FEEMPEK-----------------DSFSWTILID---GLSKSGKLEAARDVFDRMPIR-N 241
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
+V NA+I+ Y + G + +K++FD+M LV+WNS++ Y + Q +AL+LF M
Sbjct: 242 SVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLR 301
Query: 311 QPDSATFVSLLSACSHA-GLVQEGN-KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+ S + ++L A S A G+V G + HS + G ++++ + G +
Sbjct: 302 EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKS 361
Query: 369 AEKLIREMPMEPDSVIWSVLLG 390
A ++ R +P + SV++G
Sbjct: 362 ALRVFRSIPKKKLGHWTSVIVG 383
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 25/290 (8%)
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFRAC 181
+HAL++K + H V++ L+ +Y+ + A +F+ ++ ++SWN +I +
Sbjct: 34 LHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIEN 93
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ AI LF K+ + PD T VLK CA L + +H L
Sbjct: 94 QRSNDAIALFCKLLCD--------------FVPDSFTLPCVLKGCARLGALQEGKQIHGL 139
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GF D + ++L+ Y++CG I L ++VFD+M D+VSWNS++ YA G+ + A
Sbjct: 140 VLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 199
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
L++F M + DS ++ L+ S +G ++ VF M + V + M++
Sbjct: 200 LEMFEEMP-EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSV-----SWNAMINGYM 253
Query: 362 RVGRILEAEKLIREMPMEPDSVIW-SVLLGSCRKHGETRLAELAATKLKQ 410
+ G A++L +MP E V W S++ G R T+ +L L++
Sbjct: 254 KAGDSNTAKELFDQMP-ERSLVTWNSMITGYERNKQFTKALKLFEVMLRE 302
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 109/251 (43%), Gaps = 48/251 (19%)
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYA--RCGSISLSKQVFDKMTYHDLVSWNSI 288
TER A+ +H+L K + +++ L+ YA R ++ + +FD + LVSWN +
Sbjct: 27 TEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLL 86
Query: 289 LKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGN------------ 334
+K Y + ++ +A+ LF + + PDS T +L C+ G +QEG
Sbjct: 87 IKCYIENQRSNDAIALFCKLLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFG 146
Query: 335 -----------------------KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
KVF M E+ VV + ++D R G I A +
Sbjct: 147 VDKFVLSSLVSMYSKCGEIELCRKVFDRM-EDKDVV----SWNSLIDGYARCGEIELALE 201
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
+ EMP E DS W++L+ K G+ E A ++ +S+ + M N Y +G
Sbjct: 202 MFEEMP-EKDSFSWTILIDGLSKSGKL---EAARDVFDRMPIRNSVSWNAMINGYMKAGD 257
Query: 432 FNKARLIRKEM 442
N A+ + +M
Sbjct: 258 SNTAKELFDQM 268
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/597 (34%), Positives = 334/597 (55%), Gaps = 21/597 (3%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + +AC+ +I+ Q+H ++I + D + N L + Y+KF L+ A
Sbjct: 164 SNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDF--DTSIGNSLSSFYSKFRRLEFAIK 221
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH- 121
F + +++V+SWT++IS +G A F +L PNE++L SVL +C +
Sbjct: 222 AFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLT 281
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G +H+L++K + + + N+++ +Y K C EA K+FE ME N+++WN+MIA
Sbjct: 282 LDLGAQIHSLSIKLGYGSSILIKNSIMYLYLK-CGWLIEAQKLFEGMETLNLVTWNAMIA 340
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
K+ A + A K+ AL +F++L R GM PD TFS VL C+ LV
Sbjct: 341 GH--AKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGE 398
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H I K G D V+ AL+ Y +CGSI + + F +M ++SW S++ +A HG
Sbjct: 399 QIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHG 458
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+++ALQLF +M ++P+ TFV +LSACSHAGL E F M + + + P +DH+
Sbjct: 459 LSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHF 518
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
AC++D+ R+GR+ EA ++ +M EP+ IWS+L+ CR HG++ L AA +L +L+P
Sbjct: 519 ACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKP 578
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
D +V + N++ +G + +RK MK +V K SWI I+ +V+ F K H
Sbjct: 579 KDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHC 638
Query: 474 QREAIFKKLEELIGQLKGMGYVP--ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
Q ++K LE ++ ++K +GY P + + + EE HSEKLA+ F ++N
Sbjct: 639 QSLEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLP 698
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ + IR++K+I +C DCHNF++ S L G+EIV+RDS + H F + CSC Y
Sbjct: 699 T----ATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 213/414 (51%), Gaps = 37/414 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y L C +A +H H++ +E DLFV L+N+Y+K G ++ A +FD
Sbjct: 67 YFPLLQECIDRNLATEARMIHGHIVKTGFHE--DLFVMTFLVNVYSKCGVMESAHKVFDN 124
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----G 122
+P+RNV +WT L++GY Q+ + +LF +L+ +P+ ++L VL +C L G
Sbjct: 125 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 184
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRAC 181
K VHA +K+ +D + N+L + YSK E A K F+ ++ ++VISW S+I+ +C
Sbjct: 185 KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS---SC 241
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
QA +L F + +GM P+ T + VL AC ++T + +HSL
Sbjct: 242 CDNGQA----------ARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSL 291
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY--------- 292
K G+ +I N++++ Y +CG + ++++F+ M +LV+WN+++ +
Sbjct: 292 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAED 351
Query: 293 --ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
A H AL +F + ++PD TF S+LS CS+ +++G ++ H + GV+
Sbjct: 352 DVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQI-HGQIIKSGVL 410
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ +V + + G I +A K EMP + W+ ++ +HG ++ A
Sbjct: 411 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT-MISWTSMITGFARHGLSQQA 463
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 139/299 (46%), Gaps = 24/299 (8%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
+++H +K ++V L+N+YSK + A KVF+N+ RNV +W +++ +
Sbjct: 83 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A++LF KM G P T IVL AC+ L + VH+
Sbjct: 143 NSHPLLALQLFIKM-------------LEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 189
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ KY + DT I N+L Y++ + + + F + D++SW S++ + +GQA
Sbjct: 190 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
+L F +M ++P+ T S+LSAC + G ++ HS+ G + ++
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI-HSLSIKLGYGSSILIKNSIM 308
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
L + G ++EA+KL M + V W+ ++ G ++ +LA + + G +
Sbjct: 309 YLYLKCGWLIEAQKLFEGME-TLNLVTWNAMIA-----GHAKMMDLAEDDVAAHKSGST 361
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 317/558 (56%), Gaps = 26/558 (4%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D V N + YAK G L A +F M + V SW ALI G+ Q+G + L+ +
Sbjct: 435 DELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR 494
Query: 101 QYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
P+ F++AS+L +C L GK +H L+ + ++ +L+++Y +
Sbjct: 495 GSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKIL 554
Query: 156 AWKVF-ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
K+F +NME +N++ WN+MI F + A+++F +M + + + P
Sbjct: 555 LAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSK-------------IWP 601
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D + L AC+ + R +H K + + + +LI YA+CG + S+ +F
Sbjct: 602 DEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIF 661
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
D++ V+WN ++ Y +HG ++A++LF +M +PDS TF++LL+AC+HAGLV
Sbjct: 662 DRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVA 721
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG + M G+ P+L+HYAC+VD+LGR GR+ EA +L+ E+P +PDS IWS LL S
Sbjct: 722 EGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSS 781
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR + + + E A KL +L P + +V +SN Y G +++ R +R+ MK ++K
Sbjct: 782 CRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDA 841
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SWIEI +V F G + Q I + EL ++ +GY P+TS LH++EE+ K
Sbjct: 842 GCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKI 901
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L +HSEKLA+ F ++N + + +R+ KN+RICVDCHN +KL S + +EI+VRD
Sbjct: 902 KILRNHSEKLAISFGLLNTA----KGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRD 957
Query: 572 SNRFHHFKDRICSCNDYW 589
+ RFHHFK+ CSC DYW
Sbjct: 958 NKRFHHFKNGFCSCGDYW 975
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 192/364 (52%), Gaps = 33/364 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV N LI MY KFG+++ A +FD+MP+RN+VSW +++ ++G EE + LF LL
Sbjct: 230 DVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLL 289
Query: 101 ---QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ P+ ++ +V+ C + G + H LALK L + V ++L++MYSK C
Sbjct: 290 NGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSK-CG 348
Query: 154 D--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
EA +F+ E +NVISWNSMI + + A EL KM+ E++
Sbjct: 349 YLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDK------------ 395
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF-EDDTVIANALIHAYARCGSISLS 270
+ + T VL C + +H ++GF + D ++ANA + YA+CGS+ +
Sbjct: 396 VKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYA 455
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+ VF M + SWN+++ + +G ++AL L+ M ++PD T SLLSAC+
Sbjct: 456 EGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARL 515
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
+ G ++ SML N +LD + C +V L + G+IL A+ M E + V W
Sbjct: 516 KSLSCGKEIHGSMLRNGF---ELDEFICISLVSLYVQCGKILLAKLFFDNME-EKNLVCW 571
Query: 386 SVLL 389
+ ++
Sbjct: 572 NTMI 575
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 24/330 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q+ L C + NI+ ++H + I+ P+ D+ + L+ MY+ D+ +F
Sbjct: 94 QLIGLLLQLCGEYKNIEIGRKIH-NFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVF 152
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNEFSLASVLISC----DY 119
+ ++N+ W AL+SGY ++ + +F + L F P+ F+L V+ +C D
Sbjct: 153 NASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDV 212
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
G+ VH ALK + + V+V NALI MY K + A KVF+ M RN++SWNS++ A
Sbjct: 213 RLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYAC 272
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ ++ LF + N + EG+ PD T V+ CA R
Sbjct: 273 LENGVFEESYGLFKGLLNGD-----------EGLMPDVATMVTVIPLCARQGEVRLGMVF 321
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H L K G + + ++L+ Y++CG + ++ +FD +++SWNS++ Y+
Sbjct: 322 HGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDF 380
Query: 299 KEALQLFSNMN----VQPDSATFVSLLSAC 324
+ A +L M V+ + T +++L C
Sbjct: 381 RGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 21/270 (7%)
Query: 138 VYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
V + L+ MYS + ++ VF +N+ WN++++ + L A+ +F +M +
Sbjct: 129 VVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMIS 188
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
E PD T V+KAC G+ R AVH K D + NA
Sbjct: 189 LTE------------FVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNA 236
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQ 311
LI Y + G + + +VFDKM +LVSWNS++ A +G +E+ LF + +
Sbjct: 237 LIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLM 296
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
PD AT V+++ C+ G V+ G VFH + G+ +L + ++D+ + G + EA
Sbjct: 297 PDVATMVTVIPLCARQGEVRLG-MVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARV 355
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
L E + + W+ ++G K + R A
Sbjct: 356 LFD--TNEKNVISWNSMIGGYSKDRDFRGA 383
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
++L+ C +H+ I+ F++D V+ L+ Y+ C S S VF+
Sbjct: 97 GLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASR 156
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGN 334
+L WN++L Y + ++A+ +F M PD+ T ++ AC V+ G
Sbjct: 157 RKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGE 216
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
V H V+ + ++ + G+ G + A K+ +MP + + V W+ ++ +C +
Sbjct: 217 AV-HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMYACLE 274
Query: 395 HG 396
+G
Sbjct: 275 NG 276
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/496 (37%), Positives = 293/496 (59%), Gaps = 25/496 (5%)
Query: 104 FPNEFSLASVLISC-----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAW 157
P++ + L +C D GKL+H+ L+ L+++ VA AL+NMY K+ C DEA
Sbjct: 7 LPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEAT 66
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+VF + ++++SW ++++A+ L +A++LF +M +G PD
Sbjct: 67 RVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLH----------GLDGTKPDRS 116
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFED-DTVIANALIHAYARCGSISLSKQVFDK 276
F+ +L+ACA L H I + G++ D V+ +I+ Y +CG++ + +VFD
Sbjct: 117 YFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDG 176
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M+ D V+W +I+ YA HG ++E+L +F M +PD + + +LS CSHAGLV++G
Sbjct: 177 MSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQG 236
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
F + + GV P HY CM+DLLGR G + AE +IR MP + ++ W++ L +C+
Sbjct: 237 WDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACK 296
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H +T + AA K+ +LEP + +V +SNIY +G +++ +R MK ++K PG
Sbjct: 297 VHSDTERGKRAAEKVLELEPVPA-AYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGR 355
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S IE+ +RVHEF +G K HP+ I+ LE L Q++G GYVP+T L L ++ EE KE
Sbjct: 356 SSIEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERL 415
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F +++ + S +RI+KN+R+C DCH K S + G+EI +RDS
Sbjct: 416 LCFHSEKLAIAFGLLSTPA----GSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQ 471
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF+D CSC DYW
Sbjct: 472 RFHHFQDGHCSCGDYW 487
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 30/312 (9%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL---- 99
V L+NMY K G LD+A +F + ++++VSWTAL+S Y++ E +LF +
Sbjct: 48 VATALVNMYGKAGCLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHG 107
Query: 100 LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVAN-ALINMYSKSCAD 154
L P+ A +L +C L G+L H + D+ V +INMY K C +
Sbjct: 108 LDGTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGK-CGN 166
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
A +VF+ M R+ ++W ++I+ +A + EE+L +F ++Q++G
Sbjct: 167 LRAAHEVFDGMSERDTVAWTTIISG-------------YAHHGHSEESLLMFWRMQQDGS 213
Query: 213 APDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
PD + VL C AGLV E+ + ++G E +I R G + +
Sbjct: 214 KPDGVSLLCVLSVCSHAGLV-EQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAA 272
Query: 271 KQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSN-MNVQPDSATFVSLLSACSHAG 328
+ + +M + ++W L A +H + + + ++P A +VSL + + AG
Sbjct: 273 EVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAG 332
Query: 329 LVQEGNKVFHSM 340
+ ++V +M
Sbjct: 333 EWDQVDRVRSAM 344
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTE-RHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+Q+EG+ PD F L AC G + + R +HS + + G E +TV+A AL++ Y + G
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV------QPDSATFVS 319
+ + +VF + DLVSW +++ AY+ +EALQLF M + +PD + F
Sbjct: 61 CLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-MVDLLGRVGRILEAEKLIREMPM 378
LL AC+ EG ++ H ++ G ++++ G+ G + A ++ M
Sbjct: 121 LLQACATLSAAAEG-RLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMS- 178
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
E D+V W+ ++ HG + + L +++Q
Sbjct: 179 ERDTVAWTTIISGYAHHGHSEESLLMFWRMQQ 210
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A L ACA + H I + D + +INMY K G L A +FD
Sbjct: 118 FAFLLQACATLSAAAEGRLAHRR-IQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDG 176
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVH 126
M +R+ V+WT +ISGYA HG++EE +F + Q P+ SL VL C H LV
Sbjct: 177 MSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCS--HAGLVE 234
Query: 127 A-------LALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFR-NVISWNSMIAA 177
+ +F ++ +I++ +S EA +V M F+ ++W +A
Sbjct: 235 QGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLA- 293
Query: 178 FRACKL 183
ACK+
Sbjct: 294 --ACKV 297
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 316/558 (56%), Gaps = 30/558 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+ N I YAK G L A H+F M ++V SW A+I G+AQ+G+ + + + +
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511
Query: 103 -FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMY---SKSCAD 154
P++FS+ S+L++C L +GK +H L+ L+ + +VA +L+++Y SK
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ FE M +N + WN+M++ + +L EAL LFRQ+ +G+ P
Sbjct: 572 RTY--FETMGDKNSVCWNAMLSGYSQNELP-------------NEALSLFRQMLSDGLEP 616
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D + +L AC+ L VH K +D +A +L+ YA+ G + S+++F
Sbjct: 617 DEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIF 676
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+++ ++ SWN ++ + +HGQ +A++LF +M + QPD TF+ +L AC HAGLV
Sbjct: 677 NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVS 736
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG M + + P+L+HYAC++D+LGR GR+ EA I EMP EPD+ IWS LL S
Sbjct: 737 EGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSS 796
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
+ + + E A KL LE + ++ +SN+Y +G ++ R++R++MK ++K
Sbjct: 797 SITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDV 856
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SWIE+ +V+ F +G +P + I K L Q+ +GY P+ S LH++EE K
Sbjct: 857 GCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKR 916
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L HSEK+A+ F +N +E + +RI KN+RIC DCHN K S +EIV+RD
Sbjct: 917 KILKGHSEKVAICFGFLNT----KEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRD 972
Query: 572 SNRFHHFKDRICSCNDYW 589
+ RFHHFK ICSC DYW
Sbjct: 973 NKRFHHFKKGICSCGDYW 990
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 217/455 (47%), Gaps = 56/455 (12%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV N +I +Y K G+LD+A LFD+MP++N++SW +LI G++++G E +R F SLL
Sbjct: 244 DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLL 303
Query: 101 QY---FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
+ P+ ++ ++L C + G ++H +A+K L + V NALI+MYSK C
Sbjct: 304 ESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGC 363
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
EA +F +E ++V+SWNSMI A+ + +L KM EEE M
Sbjct: 364 LSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL-----------M 412
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ T +L AC A+H ++ F+ +I NA I AYA+CGS+ ++
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEH 472
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGL 329
VF M + SWN+++ +A +G +AL + + + + PD + VSLL AC GL
Sbjct: 473 VFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGL 532
Query: 330 VQEGNKVFHSMLENH-------GVVPQLDHYACMVDLLGRV-------------GRIL-- 367
+Q G ++ +L N V ++ C GR +L
Sbjct: 533 LQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSG 592
Query: 368 --------EAEKLIREM---PMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGD 415
EA L R+M +EPD + + +LG+C + L E+ LK D
Sbjct: 593 YSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMED 652
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+ + ++Y SG ++ I + G V +
Sbjct: 653 NFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASW 687
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 157/329 (47%), Gaps = 26/329 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
L C + N++ +L E M+ D + LI MY+ GY ++R +FD +
Sbjct: 111 GMLLQKCGQYKNVEIGRKLDE-MLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRL 169
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLIS----CDYLHG 122
+N+ W AL+SGY ++ +E F L+ F P+ F+ ++ + CD G
Sbjct: 170 LNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG 229
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
K VH +A+K L ++V NA+I +Y K C DEA ++F+ M +N+ISWNS+I F
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIALYGK-CGFLDEAVELFDKMPEQNLISWNSLIRGFSE 288
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+A F + +G+ PD T +L C+G +H
Sbjct: 289 NGFWLEAYRAFRSLLE-----------SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHG 337
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G + ++ NALI Y++CG +S + +F K+ +VSWNS++ AY+ G E
Sbjct: 338 MAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFE 397
Query: 301 ALQLFSNMNVQPD-----SATFVSLLSAC 324
L M ++ + T ++LL AC
Sbjct: 398 TFDLLRKMWMEEELMEVNEVTILNLLPAC 426
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 22/281 (7%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRAC 181
KL L + + LI MYS E+ VF+ + +N+ WN++++ +
Sbjct: 128 KLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRN 187
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+L +AI F ++ + E PD TF ++KAC G +VH +
Sbjct: 188 ELYDEAIHTFLELISVTE------------FQPDNFTFPCLIKACTGKCDIHLGKSVHGM 235
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G D + NA+I Y +CG + + ++FDKM +L+SWNS+++ ++ +G EA
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 295
Query: 302 LQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+ F ++ + PD AT V+LL CS G V G V H M G+V +L +
Sbjct: 296 YRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG-MVIHGMAVKLGLVHELMVCNAL 354
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRKHG 396
+D+ + G + EA L R+ +E SV+ W+ ++G+ + G
Sbjct: 355 IDMYSKCGCLSEAAILFRK--IENKSVVSWNSMIGAYSREG 393
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 285/494 (57%), Gaps = 25/494 (5%)
Query: 104 FPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWK 158
P+ + +VL + CD GK++H + ++ VY + AL+++Y + +A +
Sbjct: 86 LPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQ 145
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F+ M RN ++WN++I + + +AI+ F R + +G P T
Sbjct: 146 LFDEMPERNAVTWNALITGYTHNRKFVKAIDAF-------------RGMLADGAQPSERT 192
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+VL AC+ L +H I + + ALI YA+CG++ ++VF+++
Sbjct: 193 VVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIR 252
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
++ +WN ++ YA++GQ ALQ FS M N +PD TF+ +L AC H GLV EG
Sbjct: 253 EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRW 312
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F SM + G+ P+++HY CMVDLLGR G + EA +LI+ M +EPD +IW LL +CR H
Sbjct: 313 QFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVH 372
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
G T+L E +L +LEP + +V +SNIY + + +R M +RK PG S
Sbjct: 373 GNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSS 432
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
IEI N V+EF + R P+ EAI+K+L+ LI +LK GYV T +AL+DIE+E KE +
Sbjct: 433 IEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVM 492
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
+HSEKLAL F ++N C +RI+KN+RIC+DCH F K+ S + + IVVRD NRF
Sbjct: 493 YHSEKLALAFGLLNSPLDC----TLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRF 548
Query: 576 HHFKDRICSCNDYW 589
HHF + CSC DYW
Sbjct: 549 HHFYEGFCSCRDYW 562
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 24/292 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D++ + L+++Y + DA LFDEMP+RN V+W ALI+GY + + F +L
Sbjct: 123 DVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGML 182
Query: 101 -QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
P+E ++ VL +C +L GK +H L +V+V ALI+MY+K A
Sbjct: 183 ADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVY 242
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
E KVFE + +NV +WN +I+ +A + AL F ++ E P
Sbjct: 243 EVEKVFEEIREKNVYTWNVLISG-------------YAMNGQGDAALQAFSRMLMENFKP 289
Query: 215 DWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D TF VL AC GLVTE + S+ ++G + ++ R G + + +
Sbjct: 290 DEVTFLGVLCACCHQGLVTEGRWQFM-SMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALE 348
Query: 273 VFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
+ M+ D + W ++L A +HG K + + ++P++ LLS
Sbjct: 349 LIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLS 400
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I + + +L++F + + + PD TF VLKA A L +H ++ + GF
Sbjct: 61 IRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGF 120
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D + AL+H Y C SIS + Q+FD+M + V+WN+++ Y + + +A+ F
Sbjct: 121 ICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRG 180
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M QP T V +LSACSH G +G K H + ++ + + ++D+ + G
Sbjct: 181 MLADGAQPSERTVVVVLSACSHLGAFNQG-KWIHEFIYHNRLRLNVFVGTALIDMYAKCG 239
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
+ E EK+ E+ E + W+VL+ + G+ L + ++ +P D + F+ +
Sbjct: 240 AVYEVEKVFEEI-REKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKP-DEVTFLGV 297
Query: 423 SNIYCLSGSFNKARLIRKEMK 443
C G + R MK
Sbjct: 298 LCACCHQGLVTEGRWQFMSMK 318
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 14/187 (7%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + + AC+ G Q +HE + +N ++FV LI+MYAK G + +
Sbjct: 189 SERTVVVVLSACSHLGAFNQGKWIHEFIYHN--RLRLNVFVGTALIDMYAKCGAVYEVEK 246
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVLISCDYLHG 122
+F+E+ ++NV +W LISGYA +G + + F L++ F P+E + VL +C H
Sbjct: 247 VFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCAC--CHQ 304
Query: 123 KLVH-------ALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNS 173
LV ++ +F L + ++++ ++ +EA ++ ++M + I W +
Sbjct: 305 GLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRA 364
Query: 174 MIAAFRA 180
++ A R
Sbjct: 365 LLCACRV 371
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 285/494 (57%), Gaps = 25/494 (5%)
Query: 104 FPNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWK 158
P+ + +VL + CD GK++H + ++ VY + AL+++Y + +A +
Sbjct: 86 LPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQ 145
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCT 218
+F+ M RN ++WN++I + + +AI+ F R + +G P T
Sbjct: 146 LFDEMPERNAVTWNALITGYTHNRKFVKAIDAF-------------RGMLADGAQPSERT 192
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+VL AC+ L +H I + + ALI YA+CG++ ++VF+++
Sbjct: 193 VVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIR 252
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNK 335
++ +WN ++ YA++GQ ALQ FS M N +PD TF+ +L AC H GLV EG
Sbjct: 253 EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRW 312
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
F SM + G+ P+++HY CMVDLLGR G + EA +LI+ M +EPD +IW LL +CR H
Sbjct: 313 QFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVH 372
Query: 396 GETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
G T+L E +L +LEP + +V +SNIY + + +R M +RK PG S
Sbjct: 373 GNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSS 432
Query: 456 IEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY 515
IEI N V+EF + R P+ EAI+K+L+ LI +LK GYV T +AL+DIE+E KE +
Sbjct: 433 IEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVM 492
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
+HSEKLAL F ++N C +RI+KN+RIC+DCH F K+ S + + IVVRD NRF
Sbjct: 493 YHSEKLALAFGLLNSPLDC----TLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRF 548
Query: 576 HHFKDRICSCNDYW 589
HHF + CSC DYW
Sbjct: 549 HHFYEGFCSCRDYW 562
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 24/292 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D++ + L+++Y + DA LFDEMP+RN V+W ALI+GY + + F +L
Sbjct: 123 DVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGML 182
Query: 101 -QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
P+E ++ VL +C +L GK +H L +V+V ALI+MY+K A
Sbjct: 183 ADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVY 242
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
E KVFE + +NV +WN +I+ +A + AL F ++ E P
Sbjct: 243 EVEKVFEEIREKNVYTWNVLISG-------------YAMNGQGDAALQAFSRMLMENFKP 289
Query: 215 DWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D TF VL AC GLVTE + S+ ++G + ++ R G + + +
Sbjct: 290 DEVTFLGVLCACCHQGLVTEGRWQFM-SMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALE 348
Query: 273 VFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
+ M+ D + W ++L A +HG K + + ++P++ LLS
Sbjct: 349 LIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLS 400
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
I + + +L++F + + + PD TF VLKA A L +H ++ + GF
Sbjct: 61 IRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGF 120
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D + AL+H Y C SIS + Q+FD+M + V+WN+++ Y + + +A+ F
Sbjct: 121 ICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRG 180
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M QP T V +LSACSH G +G K H + ++ + + ++D+ + G
Sbjct: 181 MLADGAQPSERTVVVVLSACSHLGAFNQG-KWIHEFIYHNRLRLNVFVGTALIDMYAKCG 239
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLG--SCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
+ E EK+ E+ E + W+VL+ + G+ L + ++ +P D + F+ +
Sbjct: 240 AVYEVEKVFEEI-REKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKP-DEVTFLGV 297
Query: 423 SNIYCLSGSFNKARLIRKEMK 443
C G + R MK
Sbjct: 298 LCACCHQGLVTEGRWQFMSMK 318
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 14/187 (7%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + + AC+ G Q +HE + +N ++FV LI+MYAK G + +
Sbjct: 189 SERTVVVVLSACSHLGAFNQGKWIHEFIYHN--RLRLNVFVGTALIDMYAKCGAVYEVEK 246
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVLISCDYLHG 122
+F+E+ ++NV +W LISGYA +G + + F L++ F P+E + VL +C H
Sbjct: 247 VFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCAC--CHQ 304
Query: 123 KLVH-------ALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNS 173
LV ++ +F L + ++++ ++ +EA ++ ++M + I W +
Sbjct: 305 GLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRA 364
Query: 174 MIAAFRA 180
++ A R
Sbjct: 365 LLCACRV 371
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 316/558 (56%), Gaps = 30/558 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+ N I YAK G L A H+F M ++V SW A+I G+AQ+G+ + + + +
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511
Query: 103 -FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMY---SKSCAD 154
P++FS+ S+L++C L +GK +H L+ L+ + +VA +L+++Y SK
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ FE M +N + WN+M++ + +L EAL LFRQ+ +G+ P
Sbjct: 572 RTY--FERMGDKNSVCWNAMLSGYSQNELP-------------NEALSLFRQMLSDGLEP 616
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D + +L AC+ L VH K +D +A +L+ YA+ G + S+++F
Sbjct: 617 DEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIF 676
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+++ ++ SWN ++ + +HGQ +A++LF +M + QPD TF+ +L AC HAGLV
Sbjct: 677 NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVS 736
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG M + + P+L+HYAC++D+LGR GR+ EA I EMP EPD+ IWS LL S
Sbjct: 737 EGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSS 796
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
+ + + E A KL LE + ++ +SN+Y +G ++ R++R++MK ++K
Sbjct: 797 SITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDV 856
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SWIE+ +V+ F +G +P + I K L Q+ +GY P+ S LH++EE K
Sbjct: 857 GCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKR 916
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L HSEK+A+ F +N +E + +RI KN+RIC DCHN K S +EIV+RD
Sbjct: 917 KILKGHSEKVAICFGFLNT----KEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRD 972
Query: 572 SNRFHHFKDRICSCNDYW 589
+ RFHHFK ICSC DYW
Sbjct: 973 NKRFHHFKKGICSCGDYW 990
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 217/455 (47%), Gaps = 56/455 (12%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLFV N +I +Y K G+LD+A LFD+MP++N++SW +LI G++++G E +R F SLL
Sbjct: 244 DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLL 303
Query: 101 QY---FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SC 152
+ P+ ++ ++L C + G ++H +A+K L + V NALI+MYSK C
Sbjct: 304 ESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGC 363
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
EA +F +E ++V+SWNSMI A+ + +L KM EEE M
Sbjct: 364 LSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL-----------M 412
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ T +L AC A+H ++ F+ +I NA I AYA+CGS+ ++
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEH 472
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGL 329
VF M + SWN+++ +A +G +AL + + + + PD + VSLL AC GL
Sbjct: 473 VFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGL 532
Query: 330 VQEGNKVFHSMLENH-------GVVPQLDHYACMVDLLGRV-------------GRIL-- 367
+Q G ++ +L N V ++ C GR +L
Sbjct: 533 LQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSG 592
Query: 368 --------EAEKLIREM---PMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGD 415
EA L R+M +EPD + + +LG+C + L E+ LK D
Sbjct: 593 YSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMED 652
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+ + ++Y SG ++ I + G V +
Sbjct: 653 NFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASW 687
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 157/329 (47%), Gaps = 26/329 (7%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
L C + N++ +L E M+ D + LI MY+ GY ++R +FD +
Sbjct: 111 GMLLQKCGQYKNVEIGRKLDE-MLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRL 169
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLIS----CDYLHG 122
+N+ W AL+SGY ++ +E F L+ F P+ F+ ++ + CD G
Sbjct: 170 LNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG 229
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
K VH +A+K L ++V NA+I +Y K C DEA ++F+ M +N+ISWNS+I F
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIALYGK-CGFLDEAVELFDKMPEQNLISWNSLIRGFSE 288
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+A F + +G+ PD T +L C+G +H
Sbjct: 289 NGFWLEAYRAFRSLLE-----------SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHG 337
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G + ++ NALI Y++CG +S + +F K+ +VSWNS++ AY+ G E
Sbjct: 338 MAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFE 397
Query: 301 ALQLFSNMNVQPD-----SATFVSLLSAC 324
L M ++ + T ++LL AC
Sbjct: 398 TFDLLRKMWMEEELMEVNEVTILNLLPAC 426
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 22/281 (7%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRAC 181
KL L + + LI MYS E+ VF+ + +N+ WN++++ +
Sbjct: 128 KLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRN 187
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+L +AI F ++ + E PD TF ++KAC G +VH +
Sbjct: 188 ELYDEAIHTFLELISVTE------------FQPDNFTFPCLIKACTGKCDIHLGKSVHGM 235
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K G D + NA+I Y +CG + + ++FDKM +L+SWNS+++ ++ +G EA
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 295
Query: 302 LQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+ F ++ + PD AT V+LL CS G V G V H M G+V +L +
Sbjct: 296 YRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG-MVIHGMAVKLGLVHELMVCNAL 354
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLLGSCRKHG 396
+D+ + G + EA L R+ +E SV+ W+ ++G+ + G
Sbjct: 355 IDMYSKCGCLSEAAILFRK--IENKSVVSWNSMIGAYSREG 393
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 295/493 (59%), Gaps = 27/493 (5%)
Query: 106 NEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKV 159
++ +LA+ +C L GK +HA A+K D+ ++V + +++MY K C D A V
Sbjct: 29 DQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIK-CGDMVNAGIV 87
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F + + ++W SMI+ C NE++AL ++ ++++ + PD TF
Sbjct: 88 FNYISAPDDVAWTSMISG---C----------VDNGNEDQALRIYHRMRQSRVMPDEYTF 134
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ ++KA + + +H+ + K D + +L+ YA+CG+I + ++F KM
Sbjct: 135 ATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV 194
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
++ WN++L A HG A+EA+ LF +M ++PD +F+ +LSACSHAGL E +
Sbjct: 195 RNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEY 254
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
HSM ++G+ P+++HY+C+VD LGR G + EA+K+I MP + + I LLG+CR G
Sbjct: 255 LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQG 314
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ + A +L LEP DS +V +SNIY + ++ RK MK V+K PG SWI
Sbjct: 315 DVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWI 374
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
+++N +H F + HPQ + I+ K+EE++ ++ GYVP+T L D+E+E KE LY+
Sbjct: 375 DVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYY 434
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+ + +++ + + IR++KN+R+C DCHN +K S + +EIV+RD+NRFH
Sbjct: 435 HSEKLAIAYGLISTPA----STTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFH 490
Query: 577 HFKDRICSCNDYW 589
HF+D +CSC DYW
Sbjct: 491 HFRDGVCSCGDYW 503
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 170/330 (51%), Gaps = 30/330 (9%)
Query: 4 STQI-YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
S QI AT AC + Q Q+H H I DL V + +++MY K G + +A
Sbjct: 28 SDQITLATAAKACGCLVLLDQGKQIHAHAIK--AGFDSDLHVNSGILDMYIKCGDMVNAG 85
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYL- 120
+F+ + + V+WT++ISG +GN ++ R++ + Q P+E++ A+++ + +
Sbjct: 86 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 145
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMI 175
G+ +HA +K + +V +L++MY+K C ++A+++F+ M RN+ WN+M+
Sbjct: 146 ALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK-CGNIEDAYRLFKKMNVRNIALWNAML 204
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTER 233
A+ N EEA+ LF+ ++ G+ PD +F +L AC AGL +E
Sbjct: 205 VG-------------LAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 251
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN-SILKAY 292
+ +HS+ YG E + + L+ A R G + + +V + M + S N ++L A
Sbjct: 252 Y-EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGAC 310
Query: 293 ALHGQAKEALQLFSNM-NVQP-DSATFVSL 320
+ G + ++ + + ++P DSA +V L
Sbjct: 311 RIQGDVEXGKRVAARLFALEPFDSAAYVLL 340
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
++AL LF + + G D T + KAC LV +H+ K GF+ D + + +
Sbjct: 12 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
+ Y +CG + + VF+ ++ D V+W S++ +G +AL+++ M V PD
Sbjct: 72 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 131
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA------CMVDLLGRVGRILE 368
TF +L+ A S +++G ++ H V +LD + +VD+ + G I +
Sbjct: 132 YTFATLIKASSCVTALEQGRQL-------HANVIKLDCVSDPFVGTSLVDMYAKCGNIED 184
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLEPGDSLGFVQM 422
A +L ++M + + +W+ +L +HG E + + K +EP D + F+ +
Sbjct: 185 AYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP-DRVSFIGI 238
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 310/558 (55%), Gaps = 25/558 (4%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D FV +MY+K G +A+ LFDEMP RNV W A IS G + F
Sbjct: 91 NDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEF 150
Query: 100 LQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
+ P+ + + L +C G+ +H L ++ + V VAN +I++Y K
Sbjct: 151 RRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEV 210
Query: 155 E-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
E A VF M RN +SW +M+AA C+ + +E+A +F ++EG+
Sbjct: 211 ELAEMVFNGMGRRNSVSWCTMVAA---CE----------QNDEKEKACVVFLMGRKEGIE 257
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
S V+ A AG+ +VH+L K E D + +AL+ Y +CGSI +QV
Sbjct: 258 LTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQV 317
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP--DSATFVSLLSACSHAGLVQ 331
F +M +LVSWN+++ YA G A+ LF M + + T + +LSACS G V+
Sbjct: 318 FHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVANYVTLICVLSACSRGGAVK 377
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
GN++F SM + + + P +HYAC+ D+LGR G + A + +++MP+ P +W LL +
Sbjct: 378 LGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNA 437
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR +GE L ++AA L +L+P DS V +SN++ +G +++A L+RKEMK ++K
Sbjct: 438 CRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGA 497
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SW+ +N+VH F + H + I L +L +++ GY+P+T+ AL+D+EEE K
Sbjct: 498 GCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKM 557
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
++ +HSEK+AL F ++ IRI KN+RIC DCH+ K S ++G+EI+VRD
Sbjct: 558 TEVGYHSEKIALAFGLI----ALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRD 613
Query: 572 SNRFHHFKDRICSCNDYW 589
+NRFH F+D CSC D+W
Sbjct: 614 NNRFHRFRDSQCSCRDFW 631
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 38/367 (10%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF------ 104
MY+K + A+ L P R VV+WTALISG Q+G F S L YF
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNG-------YFSSALLYFSKMRREN 53
Query: 105 --PNEFSLASVLIS----CDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAW 157
PN+F+ + C GK +HA+ALK +V + +MYSK+ EA
Sbjct: 54 IKPNDFTFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQ 113
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
++F+ M RNV WN+ I+ +AI+ F + +R G PD
Sbjct: 114 RLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFI-------------EFRRVGGEPDLI 160
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
TF L ACA +H L+ + GFE D +AN +I Y +C + L++ VF+ M
Sbjct: 161 TFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGM 220
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGN 334
+ VSW +++ A + + ++A +F ++ S++SA + ++ G
Sbjct: 221 GRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGR 280
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
V H++ V + + +VD+ G+ G I + E++ EMP E + V W+ ++
Sbjct: 281 SV-HALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISGYAH 338
Query: 395 HGETRLA 401
G+ +A
Sbjct: 339 QGDVDMA 345
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/371 (46%), Positives = 238/371 (64%), Gaps = 7/371 (1%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
+L+ACA + VH+ I K GFE D ++N L+ Y +CG I +++VF K+ D
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63
Query: 282 LVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFH 338
+ SWN+++ A HG KEA+ LF M V+P+ TFV +LS CSHAGLV EG F
Sbjct: 64 VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123
Query: 339 SMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
SM +HG+ P+ +HY+CMVDL GR G + EA I +MP+EP++ +W LLG+CR HG
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183
Query: 399 RLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEI 458
LAE A +L +L P + +V +SNIY +G ++ A +RK MK V+K PG SWIE+
Sbjct: 184 ELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEV 243
Query: 459 ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHS 518
+N+VH F G HPQ E I++ LE L Q+K GY+P T+ LHD+EEE KE L HHS
Sbjct: 244 QNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHS 303
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
EKLA+ F I++ + IR++KN+R+C DCH K S ++ +EIV+RD++RFHHF
Sbjct: 304 EKLAIAFGIIST----PPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHF 359
Query: 579 KDRICSCNDYW 589
KD CSC DYW
Sbjct: 360 KDGQCSCGDYW 370
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
A + ACA ++Q Q+H +I F D+ V+N L++MY K G ++DA+ +F +
Sbjct: 2 AGILRACASVAALEQGKQVHADIIKIGFE---LDVSVSNGLVDMYGKCGRIEDAQEVFSK 58
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV- 125
+ + +V SW A+ISG AQHG +E LF +LQ PN+ + VL C H LV
Sbjct: 59 LLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCS--HAGLVD 116
Query: 126 ------HALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAA 177
++ + + +++++ ++ C DEA M N W S++ A
Sbjct: 117 EGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGA 176
Query: 178 FRA---CKLEAQAIELFAKMKNEEEALFLF 204
R +L +A+E ++ E ++
Sbjct: 177 CRVHGNIELAERAVEQLIELTPENPGTYVL 206
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 68/281 (24%)
Query: 110 LASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENM 163
+A +L +C + GK VHA +K + V V+N L++MY K C ++A +VF +
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGK-CGRIEDAQEVFSKL 59
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
+V SWN+MI+ A+ +EA+ LF Q+ + G+ P+ TF +VL
Sbjct: 60 LEPDVASWNAMISGL-------------AQHGCGKEAVLLFEQMLQTGVKPNQITFVVVL 106
Query: 224 KAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD 281
C AGLV E + FD MT
Sbjct: 107 SGCSHAGLVDE-------------------------------------GRNYFDSMTRDH 129
Query: 282 LVS-----WNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKV 336
+S ++ ++ + G EAL + M V+P+++ + SLL AC G ++ +
Sbjct: 130 GISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERA 189
Query: 337 FHSMLENHGVVPQ-LDHYACMVDLLGRVGRILEAEKLIREM 376
++E + P+ Y + ++ GR +A K+ + M
Sbjct: 190 VEQLIE---LTPENPGTYVLLSNIYAAAGRWDDAGKVRKMM 227
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/540 (38%), Positives = 298/540 (55%), Gaps = 27/540 (5%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC 117
L AR +FD + + ++ +I +A + + P+ F+ VL +C
Sbjct: 38 LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKAC 97
Query: 118 DYLHGKL-VHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSM 174
L L +H+L K D+ VYV N LI+ Y C D A K FE M R+++SW+SM
Sbjct: 98 ARLQTGLDLHSLLFKLGFDSDVYVQNGLIHFYG-CCGFLDFALKAFEEMPERDLVSWSSM 156
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG-MAPDWCTFSIVLKACAGLVTER 233
IA F AK EAL LF+++Q G + PD V+ A + L
Sbjct: 157 IACF-------------AKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLE 203
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+ I++ G E + AL+ ++RCG I S +VFD+M ++++W +++ A
Sbjct: 204 LGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLA 263
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+HG++ EAL++F M QPD TF +L ACSH GLV EG VF S+ +G+ P
Sbjct: 264 VHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLP 323
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+HY CMVDLLGR G + EA K + MP+ P+S+IW LLG+C H LAE K+ +
Sbjct: 324 EHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINE 383
Query: 411 LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGK 470
L+ +V +SN+Y G + + +R M+ R+ K PG S I + + +HEF +G
Sbjct: 384 LDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDN 443
Query: 471 RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
HPQ E+I + L +I LK +GY P+ S L DIEEE KE L +HSEKLA+ FA+
Sbjct: 444 NHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFAL--- 500
Query: 531 GSLC-RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
LC ++ IR+MKN+RIC DCH FMK ASD+ +EI++RD NRFHHF CSC DYW
Sbjct: 501 --LCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 12/140 (8%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PN 106
L++M+++ G ++++ +FDEM +RNV++WTALI+G A HG + E R+F + + F P+
Sbjct: 227 LVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPD 286
Query: 107 EFSLASVLISCDYLHGKLV-------HALALKFSLDAHVYVANALINMYSKS-CADEAWK 158
+ VL++C HG LV ++ ++ ++ ++++ ++ +EA K
Sbjct: 287 HVTFTGVLVACS--HGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACK 344
Query: 159 VFENMEFR-NVISWNSMIAA 177
+ M R N I W +++ A
Sbjct: 345 FVDGMPIRPNSIIWRTLLGA 364
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS--KQVFDKMTYHDLVSWNSILKA 291
H +H+ + K G + + L+ + A SLS + +FD + + D ++N+I++A
Sbjct: 3 HIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRA 62
Query: 292 YA--LHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+A + + V PD TF +L AC+ +Q G + HS+L G
Sbjct: 63 HADSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACAR---LQTGLDL-HSLLFKLGFDSD 118
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+ ++ G G + A K EMP E D V WS ++ K+G
Sbjct: 119 VYVQNGLIHFYGCCGFLDFALKAFEEMP-ERDLVSWSSMIACFAKNG 164
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/526 (37%), Positives = 301/526 (57%), Gaps = 30/526 (5%)
Query: 76 WTALISGYAQHGNAEE-CFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVHALA 129
+ LI YAQ G++++ L+ +L PN+F+ VL +C L G+ VH
Sbjct: 99 FNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSV 158
Query: 130 LKFSLDAHVYVANALINMYSKSCA---DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
+KF D ++V N +++MYS CA + A KVF+ M + ++W++MI +
Sbjct: 159 VKFGFDCDIHVQNTMVHMYS-CCAGGINSARKVFDEMPKSDSVTWSAMIGGY-------- 209
Query: 187 AIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
A++ EA+ LFR++Q + PD T +L AC L + + I ++
Sbjct: 210 -----ARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHE 264
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
++NALI +A+CG IS + ++F M +VSW S++ A+HG+ +EA LF
Sbjct: 265 IHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFE 324
Query: 307 NMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M V PD F+ LLSACSH+GLV+ G + F SM++ + +VP+++HY CMVD+ R
Sbjct: 325 EMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRT 384
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
G + EA + +R MP+EP+ VI L+ +CR HGE +L E L + EP +V +S
Sbjct: 385 GLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLS 444
Query: 424 NIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLE 483
NIY + S+ K IR+ M+ ++K PG + IEI+N ++EF +G K H Q + I++ ++
Sbjct: 445 NIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVD 504
Query: 484 ELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIM 543
E+ ++K GY P TS L DI EE KE+ L HSEKLA+ F ++ + IRI+
Sbjct: 505 EMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPP----GTPIRIV 560
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+R+C DCH+ K S + +EI++RD NRFHHFK CSC D+W
Sbjct: 561 KNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 143/306 (46%), Gaps = 56/306 (18%)
Query: 41 DLFVTNHLINMYAK-FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+ V N +++MY+ G ++ AR +FDEMPK + V+W+A+I GYA+ G + E LF +
Sbjct: 166 DIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREM 225
Query: 100 -LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
+ P+E ++ S+L +C L GK + A + + V V+NALI+M++K C D
Sbjct: 226 QMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAK-CGD 284
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+A K+F M + ++SW S+I A +EA LF ++ G+
Sbjct: 285 ISKALKLFRAMNEKTIVSWTSVIVG-------------MAMHGRGQEATCLFEEMTSSGV 331
Query: 213 APDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
APD F +L AC +GLV ER S++ KY ++ Y R G +
Sbjct: 332 APDDVAFIGLLSACSHSGLV-ERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLV--- 387
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLV 330
KEAL+ NM ++P+ +L+SAC G
Sbjct: 388 ----------------------------KEALEFVRNMPIEPNPVILRTLVSACRGHGEF 419
Query: 331 QEGNKV 336
+ G K+
Sbjct: 420 KLGEKI 425
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 206/585 (35%), Positives = 316/585 (54%), Gaps = 36/585 (6%)
Query: 16 ALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVS 75
A G I A+ +H + N + V N L+ +YAK G + +A+ +F MPKR+ V+
Sbjct: 349 ATEGKILHALVIHVGLHEN-------VIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVT 401
Query: 76 WTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYL-HGKLVHALA 129
W ALI G+A +E + F + + P N ++++VL +C D L HG +HA
Sbjct: 402 WNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFI 461
Query: 130 LKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
+ + YV N+LI MY+K C D + +F+ + +N
Sbjct: 462 ILTGFQSDEYVQNSLITMYAK-CGDLNSSNNIFDRLTSKNA-------------SAWNAM 507
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+ A + EEAL +++R G+ D +FS L A A L +H L K G
Sbjct: 508 MAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGC 567
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG---QAKEALQL 304
+ + +A+A + Y +CG I ++ + +SWN + +++ HG +AKE
Sbjct: 568 DSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHE 627
Query: 305 FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
N+ V+PD TFVSLLSACSH G+V+EG + SM++ G+ ++ H C++DLLGR G
Sbjct: 628 MINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSG 687
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
R EAE I+EMP+ P +W LL +C+ HG L A L +L+P D +V SN
Sbjct: 688 RFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSN 747
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
I +G + IR++M ++++K P SW++++N++ F G HPQ I+ KLEE
Sbjct: 748 ICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEE 807
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMK 544
L +K GY+P+ S AL D +EE KE L++HSE+LAL + +++ E S ++I K
Sbjct: 808 LKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISS----PEGSTLKIFK 863
Query: 545 NIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
N+R+C DCH+ K AS +LG++IV+RD RFH F CSC DYW
Sbjct: 864 NLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 203/396 (51%), Gaps = 28/396 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D+FV L+++Y +G DA +F EM +NVVSWTAL+ Y +G ++ +
Sbjct: 63 SDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRM 122
Query: 100 LQYFFP-NEFSLASVLISCDYLHGKL----VHALALKFSLDAHVYVANALINMYSK-SCA 153
N+ +++SV+ +C L +L V +K+ L+ +V VAN+LI+M+
Sbjct: 123 RSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSV 182
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+EA VF M+ + ISWNSMIAA+ L +++ F+ ++FR + +E
Sbjct: 183 EEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFS---------WMFR-VHKE--- 229
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+ T S +L C + + +HSL+ K+G+ + +N LI Y+ G ++ V
Sbjct: 230 INSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELV 289
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA---TFVSLLSACSHAGLV 330
F M D++SWNS++ YA G +AL+L + M A TF S L+ACS
Sbjct: 290 FQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFA 349
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG K+ H+++ + G+ + +V L + G ++EA+K+ + MP + D V W+ L+G
Sbjct: 350 TEG-KILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIG 407
Query: 391 SCRKHGETRLAELAATKLKQL-EPGDSLGFVQMSNI 425
H ++ + A K + E G + ++ +SN+
Sbjct: 408 G---HADSEEPDEALKAFKLMREEGVPINYITISNV 440
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 162/327 (49%), Gaps = 25/327 (7%)
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD-----YLHGKLVHALALKFS 133
+SG+ + G+ E R F + + P+ ++AS++ +C+ + G VH +K
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
L + V+V +L+++Y A +A KVF+ M ++NV+SW +++ A+
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAY-------------V 107
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
+ ++R+++ EGM+ + T S V+ C L E V + KYG E +
Sbjct: 108 DYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVS 167
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
+AN+LI + GS+ + VF M HD +SWNS++ AY +G KE+L+ FS M +
Sbjct: 168 VANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVH 227
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
+ +S T ++L+ C ++ G + HS++ G + ++ + GR +A
Sbjct: 228 KEINSTTLSTMLAGCGSVDNLKWGRGI-HSLVLKFGWNSNVCASNTLITMYSDAGRCEDA 286
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHG 396
E + + M +E D + W+ ++ + G
Sbjct: 287 ELVFQGM-VEKDMISWNSMMACYAQDG 312
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/566 (37%), Positives = 325/566 (57%), Gaps = 39/566 (6%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSLL-Q 101
V N + Y+K G L +A +F M + R+ VSW ++I Y QH + L+ ++ +
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 102 YFFPNEFSLASVL---ISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--- 154
F + F+LASVL S D+L G+ H +K + +V + LI+ YSK C
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK-CGGCDG 293
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQRE 210
++ KVF+ + +++ WN+MI+ + M E EEA+ FRQ+QR
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGY--------------SMNEELSEEAVKSFRQMQRI 339
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISL 269
G PD C+F V AC+ L + +H L K + + + NALI Y + G++
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD 399
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++ VFD+M + VS+N ++K YA HG EAL L+ M + P+ TFV++LSAC+H
Sbjct: 400 ARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH 459
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G V EG + F++M E + P+ +HY+CM+DLLGR G++ EAE+ I MP +P SV W+
Sbjct: 460 CGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LLG+CRKH LAE AA +L ++P + +V ++N+Y + + + +RK M+G R
Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKR 579
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
+RK PG SWIE++ + H F + HP + + LEE++ ++K +GYV + A+ +
Sbjct: 580 IRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKED 639
Query: 507 EEHKEE---QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
E + + +L HHSEKLA+ F +M+ R+ + ++KN+RIC DCHN +K S +
Sbjct: 640 EAGEGDEEMRLGHHSEKLAVAFGLMST----RDGEELVVVKNLRICGDCHNAIKFMSAVA 695
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
G+EI+VRD+ RFH FKD CSC DYW
Sbjct: 696 GREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 186/376 (49%), Gaps = 30/376 (7%)
Query: 35 FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
+ E ++F N ++ YAK + AR LFDE+P+ + VS+ LISGYA
Sbjct: 67 YSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV 126
Query: 95 LFCSLLQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYS 149
LF + + F + F+L+ ++ +C D + K +H ++ D++ V NA + YS
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYS 184
Query: 150 K-SCADEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K EA VF M E R+ +SWNSMI A + + K +AL L++++
Sbjct: 185 KGGLLREAVSVFYGMDELRDEVSWNSMIVA-------------YGQHKEGAKALALYKEM 231
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG-- 265
+G D T + VL A L H + K GF ++ + + LI Y++CG
Sbjct: 232 IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291
Query: 266 -SISLSKQVFDKMTYHDLVSWNSILKAYALHGQ-AKEALQLFSNMNV---QPDSATFVSL 320
+ S++VF ++ DLV WN+++ Y+++ + ++EA++ F M +PD +FV +
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
SACS+ + ++ +++H ++ ++ L + G + +A + MP E
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-EL 410
Query: 381 DSVIWSVLLGSCRKHG 396
++V ++ ++ +HG
Sbjct: 411 NAVSFNCMIKGYAQHG 426
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 150/325 (46%), Gaps = 40/325 (12%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMI 175
D GK +HAL +K + + Y++N +N+YSK C A F + E NV S+N ++
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSK-CGRLSYARAAFYSTEEPNVFSYNVIV 81
Query: 176 AAFRACKLEAQAIELFAKMKNEEE------------------ALFLFRQLQREGMAPDWC 217
A+ A +LF ++ + A+ LF+++++ G D
Sbjct: 82 KAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGF 141
Query: 218 TFSIVLKAC---AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T S ++ AC L+ + H +V GF+ + + NA + Y++ G + + VF
Sbjct: 142 TLSGLIAACCDRVDLIKQLHCFSVSG-----GFDSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 275 DKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
M D VSWNS++ AY H + +AL L+ M + D T S+L+A + +
Sbjct: 197 YGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHL 256
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG---RILEAEKLIREMPMEPDSVIWSV 387
G + FH L G + ++D + G + ++EK+ +E+ + PD V+W+
Sbjct: 257 I-GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNT 314
Query: 388 LLGSCRKHGETRLAELAATKLKQLE 412
++ + E L+E A +Q++
Sbjct: 315 MISGYSMNEE--LSEEAVKSFRQMQ 337
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 324/591 (54%), Gaps = 32/591 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L A G + ++H + + + DL + N L++MY K ++ + +FD M
Sbjct: 370 SLLSAVGHLGRLINGREVHAYAVKQRLD--SDLQIANTLMDMYIKCYSVECSARVFDRMR 427
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHG----KL 124
++ VSWT +I+ YAQ E F + + + + S+L +C L K
Sbjct: 428 IKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQ 487
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACK 182
VH+ A++ L + + N +I++Y + C + A +FE ++ +++++W SM+ F
Sbjct: 488 VHSYAIRNGL-LDLILKNRIIDIYGE-CGEVCYALNIFEMLDKKDIVTWTSMVNCFAENG 545
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
L +A+ LF KM N G+ PD +L A AGL + +H +
Sbjct: 546 LLHEAVALFGKMLNA-------------GIQPDSVALVGILGAIAGLSSLTKGKEIHGFL 592
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ F + + ++L+ Y+ CGS++ + +VFD+ D+V W +++ A +HG K+A+
Sbjct: 593 IRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAI 652
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+F M V PD +F++LL ACSH+ LV EG M+ + + P +HYAC+VDL
Sbjct: 653 YIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDL 712
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
LGR G+ EA K I+ MP+EP SV+W LLG+CR H LA +A KL +LEP + +
Sbjct: 713 LGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNY 772
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V +SN++ G +N + IR +M +RK P SWIEI N VH F + H +AI
Sbjct: 773 VLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIH 832
Query: 480 KKLEELIGQLKGMG-YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
KL E+ +L+ G YV +TS LHD+ EE K + L+ HSE+LA+ F +++ S +
Sbjct: 833 LKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTAS----GT 888
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+R+C DCH F KL S L +EIVVRD+NRFHHF CSC D+W
Sbjct: 889 PLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 169/347 (48%), Gaps = 29/347 (8%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDL-FVTNHLINMYAKFGYLDDARH 63
T Y + A+ + + QLH H + D F+ L+ MY K G L DA
Sbjct: 55 TDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHR 114
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-----LQYFFPNEFSLASVLISC- 117
LFD MP R V SW ALI G A E ++ ++ + P+ +LASVL +C
Sbjct: 115 LFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACG 174
Query: 118 ---DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENM-EFRNVISWN 172
D G VH LA+K LD VANAL+ MY+K D A +VFE M + R+V SWN
Sbjct: 175 AEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWN 234
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
S I+ C + EAL LFR++Q +G + + T VL+ CA L
Sbjct: 235 SAIS---GCVQNGMFL----------EALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQL 281
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
H +H+ + K G E + + NAL+ YARCG + + +VF ++ D +SWNS+L Y
Sbjct: 282 NHGRELHAALLKCGTEFN-IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCY 340
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
+ EA+ F M PD A VSLLSA H G + G +V
Sbjct: 341 VQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREV 387
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 209/457 (45%), Gaps = 39/457 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A++ AC G+ + ++H + + + + V N L+ MYAK G LD A +F+ M
Sbjct: 167 ASVLKACGAEGDGRCGSEVHGLAVKSGLD--RSTLVANALVGMYAKCGLLDSALRVFEWM 224
Query: 69 -PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYL----HG 122
R+V SW + ISG Q+G E LF + F N ++ VL C L HG
Sbjct: 225 RDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHG 284
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +HA LK + ++ NAL+ MY++ D A +VF + ++ ISWNSM++ +
Sbjct: 285 RELHAALLKCGTEFNIQ-CNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQN 343
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+L A+AI+ F +M + G PD +L A L + VH+
Sbjct: 344 RLYAEAIDFFGEM-------------VQNGFNPDHACIVSLLSAVGHLGRLINGREVHAY 390
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K + D IAN L+ Y +C S+ S +VFD+M D VSW +I+ YA + EA
Sbjct: 391 AVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEA 450
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ F ++ D S+L ACS + +V HS +G++ L ++D
Sbjct: 451 IGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQV-HSYAIRNGLL-DLILKNRIID 508
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG---D 415
+ G G + A + EM + D V W+ ++ ++G L E A K L G D
Sbjct: 509 IYGECGEVCYALNIF-EMLDKKDIVTWTSMVNCFAENG--LLHEAVALFGKMLNAGIQPD 565
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR-KYP 451
S+ V + S K KE+ G +R K+P
Sbjct: 566 SVALVGILGAIAGLSSLTKG----KEIHGFLIRGKFP 598
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 136/280 (48%), Gaps = 23/280 (8%)
Query: 122 GKLVHALALK---FSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G+ +HA A+ D ++A L+ MY K C +A ++F+ M R V SWN++I
Sbjct: 74 GRQLHAHAVATGALGDDDAGFLATKLLFMYGK-CGRLPDAHRLFDGMPARTVFSWNALIG 132
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A + +A+ ++ M+ E G APD CT + VLKAC R S
Sbjct: 133 ACLSSGGAGEAVGVYRAMRASEPV---------AGAAPDGCTLASVLKACGAEGDGRCGS 183
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALH 295
VH L K G + T++ANAL+ YA+CG + + +VF+ M D+ SWNS + +
Sbjct: 184 EVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQN 243
Query: 296 GQAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH 352
G EAL LF M +S T V +L C+ + G ++ H+ L G +
Sbjct: 244 GMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGREL-HAALLKCGTEFNIQC 302
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
A +V + R G + A ++ RE+ + D + W+ +L SC
Sbjct: 303 NALLV-MYARCGWVDSALRVFREIG-DKDYISWNSML-SC 339
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 318/556 (57%), Gaps = 36/556 (6%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE 107
L+ YA+ G+LD A+ FD MP+R+ +++TA+ + + G R +L+Y +
Sbjct: 238 LLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGE----LRGAREMLRYLSAVD 293
Query: 108 FSLASVLISCDYLHGKL--VHAL--ALKFSLDAHVYVANALINMYSKSCA--DEAWKVFE 161
+ L+ G L V L A++ A VA L+N+Y K C D+A +V +
Sbjct: 294 VIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGK-CGRVDDARRVLD 352
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
M R +SW +MIAA+ A+ N EA+ LF+ + EG P T
Sbjct: 353 AMPVRTSVSWTAMIAAY-------------AQNGNAAEAINLFQCMDLEGAEPSDITLIS 399
Query: 222 VLKACAGLVTERHASAVHSLIAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDK--MT 278
V+ +CA L T +H+ I F ++ NA+I Y +CG++ L+++VF+ +
Sbjct: 400 VVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLR 459
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGN 334
+V+W ++++AYA +G +EA++LF M +P+ TF+S+LSACSH G +++
Sbjct: 460 TRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAW 519
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI-REMPMEPDSVIWSVLLGSCR 393
+ F SM + GV P DHY C+VDLLGR GR+ EAEKL+ R E D V W L +C+
Sbjct: 520 EHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQ 579
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
+G+ ++ AA ++ +LEP + G V +SN+Y G IR EMK S V+K+ G
Sbjct: 580 MNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGR 639
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWIEI NRVHEF HP++ I+ +LE L ++K GYVP+T + L D++EE K +
Sbjct: 640 SWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQL 699
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L +HSE+LA+ I++ + +R++KN+R+C DCH K S ++G++I+VRD++
Sbjct: 700 LGYHSERLAMALGIISTPP----GTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTS 755
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFKD +CSC DYW
Sbjct: 756 RFHHFKDGVCSCGDYW 771
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 186/387 (48%), Gaps = 43/387 (11%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
D F N +I YA+ LDDAR LF M R+VVSW L++GYA+H EE LF +
Sbjct: 103 DAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEEASALFRRM 162
Query: 100 LQYFFPNEFSLASVLISCDYLH-GKLVHALAL----KFSLDAHVYVANALINMYSKSC-A 153
+ + + SVL Y H G L A L + D NA+I Y K+
Sbjct: 163 PLW---DTVTCTSVLQG--YAHNGHLAEAQELFDRIGGAGDRDATACNAMIAAYGKNARV 217
Query: 154 DEAWKVFENMEFRNVISWNSMIAAF--------------RACKLEAQAIELFAKMKNEEE 199
D A +F ++ RN SW+ ++ + R + ++ A + +++
Sbjct: 218 DLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQG 277
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE--RHASAV-HSLIAKYGFEDDTVIA 254
L R++ R A D ++ +L+ + G + E R SA+ H +A TV+A
Sbjct: 278 ELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVAT------TVVA 331
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---Q 311
L++ Y +CG + +++V D M VSW +++ AYA +G A EA+ LF M++ +
Sbjct: 332 GTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAE 391
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ-LDHYACMVDLLGRVGRILEAE 370
P T +S++ +C+ G + G ++ H+ + + + Q L ++ + G+ G + A
Sbjct: 392 PSDITLISVVDSCAVLGTLSLGKRI-HARIRSSPLFSQSLMLLNAVITMYGKCGNLELAR 450
Query: 371 KLIREMPMEPDSVI-WSVLLGSCRKHG 396
++ +P+ SV+ W+ ++ + ++G
Sbjct: 451 EVFESVPLRTRSVVTWTAMIRAYAQNG 477
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 25/292 (8%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQY 102
V L+N+Y K G +DDAR + D MP R VSWTA+I+ YAQ+GNA E LF C L+
Sbjct: 330 VAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEG 389
Query: 103 FFPNEFSLASVLISCDYLH----GKLVHALALKFSL-DAHVYVANALINMYSKSCADE-A 156
P++ +L SV+ SC L GK +HA L + + NA+I MY K E A
Sbjct: 390 AEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELA 449
Query: 157 WKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+VFE++ R+V++W +MI A+ + +AIELF +M + G P
Sbjct: 450 REVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVID------------GGTEP 497
Query: 215 DWCTFSIVLKACAGLVT-ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+ TF VL AC+ L E+ S+ +G L+ R G + ++++
Sbjct: 498 NRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKL 557
Query: 274 F--DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN-VQPDSATFVSLLS 322
K D+V W + L A ++G + + + ++ ++P++ LLS
Sbjct: 558 LLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLS 609
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 198/473 (41%), Gaps = 102/473 (21%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
ACA+ + +A LH+ + + + + L TN LI+++ K G D AR +F+ +
Sbjct: 14 IRACAIGRKLHEAKILHDEIARSPHGDNRRL--TNLLIDLFGKCGDPDAARAVFNRVRLP 71
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALK 131
N SW+ +I Y + LF S+ +
Sbjct: 72 NEYSWSCIIQAYVSSSRIHDARALFDSMPGF----------------------------- 102
Query: 132 FSLDAHVYVANALINMYSK-SCADEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIE 189
DA + N +I Y++ + D+A ++F M R+V+SW ++A
Sbjct: 103 ---DAFTW--NIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAG------------ 145
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSI--VLKACA---------------GLVTE 232
+A+ EEA LFR++ P W T + VL+ A G +
Sbjct: 146 -YARHDRLEEASALFRRM------PLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGD 198
Query: 233 RHASAVHSLIAKYGFEDDTVIANA---------------LIHAYARCGSISLSKQVFDKM 277
R A+A +++IA YG +A L+ YA+ G + L+K+ FD+M
Sbjct: 199 RDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRM 258
Query: 278 TYHDLVSWNSILKAYALHGQ---AKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGN 334
D +++ ++ + G+ A+E L+ S ++V + +LL S G + E
Sbjct: 259 PQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDV----IAWNALLEGYSRTGDLDEVR 314
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F +M H V +V+L G+ GR+ +A +++ MP+ SV W+ ++ + +
Sbjct: 315 RLFSAM--EHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRT-SVSWTAMIAAYAQ 371
Query: 395 HGETRLA--ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
+G A L+ EP D + + + + + G+ + + I ++ S
Sbjct: 372 NGNAAEAINLFQCMDLEGAEPSD-ITLISVVDSCAVLGTLSLGKRIHARIRSS 423
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 219 FSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
F ++ACA A +H IA+ D+ + N LI + +CG ++ VF+++
Sbjct: 10 FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP--DSATFVSLLSACSHAGLVQEGNKV 336
+ SW+ I++AY + +A LF +M P D+ T+ +++A + + + ++
Sbjct: 70 LPNEYSWSCIIQAYVSSSRIHDARALFDSM---PGFDAFTWNIMIAAYARINRLDDAREL 126
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
FH M+ VV +A +V R R+ EA L R MP+ SVL G
Sbjct: 127 FHGMISGRDVVS----WAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQG 176
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/596 (34%), Positives = 319/596 (53%), Gaps = 34/596 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHE--HMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
ST T + C L G + +L + H+ + P D N L++ + G D A
Sbjct: 91 STPRKTTATYNCLLAGYARALGRLADARHLFDRIPTP--DAVSYNTLLSCHFASGDADGA 148
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH 121
R LF MP R+VVSW ++SG ++ G EE +F ++ P S++ + +
Sbjct: 149 RRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAM-----PVRNSVSWNAMVSGFAC 203
Query: 122 GKLVHALALKF---SLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
+ + A F + A+++ Y +A + FE M RN++SWN+++A
Sbjct: 204 SRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAG 263
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREG-MAPDWCTFSIVLKACAGLVTERHAS 236
+ K + ++AL LFR + RE + P+ T S VL C+ L
Sbjct: 264 Y-------------VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGK 310
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H K + + +L+ Y +CG +S + ++F +M D+V+WN+++ YA HG
Sbjct: 311 QIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHG 370
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
KEA+ LF M V+P+ TFV++L+AC H GL G + F M E +G+ P++DHY
Sbjct: 371 DGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHY 430
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+CMVDLL R G++ A LIR MP EP + LL +CR + AELAA KL + +P
Sbjct: 431 SCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDP 490
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+ +VQ++NIY + ++ +R+ MK + V K PG SWIEI+ +HEF S + HP
Sbjct: 491 QSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHP 550
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
Q I +KL +L ++K MGYVP+ LHD++E K + L HSEKLA+ F +++
Sbjct: 551 QLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTA-- 608
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+R+C DCHN K+ S + +EI++RD+ RFHHF+ CSC DYW
Sbjct: 609 --PGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/596 (34%), Positives = 319/596 (53%), Gaps = 34/596 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHE--HMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
ST T + C L G + +L + H+ + P D N L++ + G D A
Sbjct: 42 STPRKTTATYNCLLAGYARALGRLADARHLFDRIPTP--DAVSYNTLLSCHFASGDADGA 99
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH 121
R LF MP R+VVSW ++SG ++ G EE +F ++ P S++ + +
Sbjct: 100 RRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAM-----PVRNSVSWNAMVSGFAC 154
Query: 122 GKLVHALALKF---SLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
+ + A F + A+++ Y +A + FE M RN++SWN+++A
Sbjct: 155 SRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAG 214
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREG-MAPDWCTFSIVLKACAGLVTERHAS 236
+ K + ++AL LFR + RE + P+ T S VL C+ L
Sbjct: 215 Y-------------VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGK 261
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H K + + +L+ Y +CG +S + ++F +M D+V+WN+++ YA HG
Sbjct: 262 QIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHG 321
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
KEA+ LF M V+P+ TFV++L+AC H GL G + F M E +G+ P++DHY
Sbjct: 322 DGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHY 381
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
+CMVDLL R G++ A LIR MP EP + LL +CR + AELAA KL + +P
Sbjct: 382 SCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDP 441
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+ +VQ++NIY + ++ +R+ MK + V K PG SWIEI+ +HEF S + HP
Sbjct: 442 QSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHP 501
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
Q I +KL +L ++K MGYVP+ LHD++E K + L HSEKLA+ F +++
Sbjct: 502 QLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTA-- 559
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+R+C DCHN K+ S + +EI++RD+ RFHHF+ CSC DYW
Sbjct: 560 --PGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 216/633 (34%), Positives = 339/633 (53%), Gaps = 105/633 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ C+++ +++ Q+H H I + FV L++MYAK + +A +LF+
Sbjct: 141 WGSVLRVCSMYVLLEKGKQIHAHAIKT--QFDSNAFVVTGLVDMYAKCKCILEAEYLFEL 198
Query: 68 MP-KRNVVSWTALISGYAQHGN---AEECFR------LFCSLLQYFFPNEFSLASVLISC 117
P KRN V WTA+++GY+Q+G+ A ECFR + C+ Q+ FP+ + + +C
Sbjct: 199 APDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECN--QFTFPSILTACGSISAC 256
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMI 175
+ G VH ++ A+V+V +AL++MYSK C D A ++ E ME + +SWNSMI
Sbjct: 257 GF--GAQVHGCIVRSGFGANVFVGSALVDMYSK-CGDLSNARRMLETMEVDDPVSWNSMI 313
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
C + EEAL LFR + M D T+
Sbjct: 314 VG---CVRQGLG----------EEALSLFRIMHLRHMKIDEFTYP--------------- 345
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+++ NAL+ YA+ G + VF+KMT D++SW S++ +
Sbjct: 346 ---------------SLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN 390
Query: 296 GQAKEALQLFSNM---NVQPDSATFVSLLSACSHA--------GLVQEGNKVF------- 337
G +EAL+LF M + PD ++LSA ++ G +++ NKVF
Sbjct: 391 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQD 450
Query: 338 ---------------------HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
SM E +G+ P +HYACM+DLLGR G+++EA++L+ +M
Sbjct: 451 VITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM 510
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
++PD+ +W LL +CR HG L E AA L +LEP +++ +V +SN+Y +G + +A
Sbjct: 511 AVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAA 570
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
R+ MK V K PG SWIE+ ++VH F S + HP+ I+ K++E++ +K GYVP
Sbjct: 571 KTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVP 630
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFM 556
+ + ALHD++EE KE L +HSEKLA+ F ++ + IRI KN+RIC DCH M
Sbjct: 631 DMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPP----GAPIRIFKNLRICGDCHTAM 686
Query: 557 KLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S + + +++RDSN FHHF++ CSC+DYW
Sbjct: 687 KYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 220/480 (45%), Gaps = 80/480 (16%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G + A +L + M + +D N +I YA G L++AR LF E P R+ ++W++
Sbjct: 55 GRVDDARKLFDVMPD------RDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSS 108
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYL----HGKLVHALALKF 132
LISGY ++G E LF +QY PN+F+ SVL C GK +HA A+K
Sbjct: 109 LISGYCRYGCDVEALELFWE-MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKT 167
Query: 133 SLDAHVYVANALINMYSK-SCADEAWKVFE-NMEFRNVISWNSMIAAFRACKLEAQAIEL 190
D++ +V L++MY+K C EA +FE + RN + W +M+
Sbjct: 168 QFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG------------- 214
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
+++ + +A+ FR ++ EG+ + TF +L AC + + VH I + GF +
Sbjct: 215 YSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGAN 274
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV 310
+ +AL+ Y++CG +S ++++ + M D VSWNS++ G +EAL LF M++
Sbjct: 275 VFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHL 334
Query: 311 Q---------------------------------------PDSATFVSLLSACSHAGLVQ 331
+ D ++ SL++ C H G +
Sbjct: 335 RHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYE 394
Query: 332 EGNKVFHSM---------LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
E ++F M + V+ LD+ +V + + G I +A K+ M ++ D
Sbjct: 395 EALRLFCEMRIMGIHPDQIVIAAVLSALDN--SLVSMYAKCGCIEDANKVFDSMEIQ-DV 451
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ W+ L+ ++G R + ++ ++PG + M ++ SG +A+ + +M
Sbjct: 452 ITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPE-HYACMIDLLGRSGKLMEAKELLNQM 510
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 159/354 (44%), Gaps = 36/354 (10%)
Query: 144 LINMYSKSCADEAWKVFENMEFRNVISWNSMIAAF------------------RACKLEA 185
L N+ D+A K+F+ M R+ SWN+MI A+ R+C +
Sbjct: 48 LSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWS 107
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
I + + + EAL LF ++Q EG P+ T+ VL+ C+ V +H+ K
Sbjct: 108 SLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKT 167
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVF----DKMTYHDLVSWNSILKAYALHGQAKEA 301
F+ + + L+ YA+C I ++ +F DK + V W +++ Y+ +G +A
Sbjct: 168 QFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNH---VLWTAMVTGYSQNGDGHKA 224
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++ F +M ++ + TF S+L+AC G +V H + G + + +VD
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQV-HGCIVRSGFGANVFVGSALVD 283
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEPGD- 415
+ + G + A +++ M ++ D V W+ ++ C + GE L+ L+ ++ +
Sbjct: 284 MYSKCGDLSNARRMLETMEVD-DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEF 342
Query: 416 ---SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
SL + ++Y G F+ A + ++M V + L + N +E A
Sbjct: 343 TYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEA 396
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 43/182 (23%)
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNV--- 310
+N ++ ++CG + ++++FD M D SWN+++ AYA G+ EA +LF +
Sbjct: 44 SNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSC 103
Query: 311 -------------------------------QPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+P+ T+ S+L CS L+++G ++
Sbjct: 104 ITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQI--- 160
Query: 340 MLENHGVVPQLDHYA----CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
H + Q D A +VD+ + ILEAE L P + + V+W+ ++ ++
Sbjct: 161 --HAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQN 218
Query: 396 GE 397
G+
Sbjct: 219 GD 220
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 310/560 (55%), Gaps = 28/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+ V ++N Y K G LD AR LFD + R+ W A+IS H +E L +
Sbjct: 36 DVIVATAVMNAYGKCGDLDSARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMR 95
Query: 100 LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALIN-MYSK-SCA 153
L P++ + + L +C D+ G +HA A + DA V AL+N MY++
Sbjct: 96 LDGVTPSKGTCVAALNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSL 155
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
++A ++F+ M RNVISW +M+ + +++ EAL +FR + EG+
Sbjct: 156 EDAREIFDAMTTRNVISWTAMVG-------------VHSQLGLNREALRIFRSILLEGVT 202
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ TF+ VL A L + R A V + +++ GF + +AN L+ A +CGS+ +
Sbjct: 203 PNDVTFTAVLNASGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKF 262
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F M + VSWNS + A A HG ++LF M + S T + +LS+CSHAGLV
Sbjct: 263 FRVMPVQNQVSWNSAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLV 322
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI-WSVLL 389
+G F +M ++G+ + +HY+C++DLL R G + AE+ ++ +P +SV W LL
Sbjct: 323 AQGYSYFLNMHVDYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLL 382
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
C+ HG+ A ++ L PG + ++ M N+Y +G + +A +RK M +K
Sbjct: 383 CGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVDLGPKK 442
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
PGLSWIE++ R+HEF G HP+ I ++LE L ++K G+V +T ++D++ +
Sbjct: 443 EPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNDKMKRAGFVCDTKAVVYDLQAKE 502
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE L HSEKLA+ F +++ + +RIMKN+R+C DCH+ K S L+G+EIVV
Sbjct: 503 KESLLCQHSEKLAIAFGLISTAA----GEPLRIMKNLRVCSDCHSATKFISGLVGREIVV 558
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+ RFHHF+ CSC D+W
Sbjct: 559 RDAYRFHHFRGGACSCEDFW 578
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 17/235 (7%)
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKY----GFEDDTVIANALIHAYARCGSISL 269
P+ T+ +L AC H V ++ A+ E D ++A A+++AY +CG +
Sbjct: 2 PNDVTYVAILGACG------HPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDS 55
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++ +FD++ D WN+++ +H Q EAL+L M V P T V+ L+AC H
Sbjct: 56 ARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGTCVAALNACCH 115
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
+ EG ++ E G + A + + R+G + +A ++ M + + W+
Sbjct: 116 SRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTR-NVISWT 174
Query: 387 VLLGSCRKHGETR--LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
++G + G R L + L+ + P D + F + N S A+L++
Sbjct: 175 AMVGVHSQLGLNREALRIFRSILLEGVTPND-VTFTAVLNASGNLASIRAAKLVQ 228
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/500 (38%), Positives = 295/500 (59%), Gaps = 28/500 (5%)
Query: 100 LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
L P+E ++ S++ +C L GKL+H+ + + LD ++ V NA+++MY K C D
Sbjct: 4 LDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCK-CDDI 62
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
A +VF + ++V+SW SM++ AK +E+L LFR++Q +
Sbjct: 63 ESAQEVFNRIREKDVLSWTSMLSGL-------------AKSGYFQESLALFRKMQLHKIE 109
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD T VL ACA +H LI K+ D V+ AL+ YA+CGSI L+ QV
Sbjct: 110 PDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQV 169
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F +M ++ +WN+++ A+HG ++A+ LF M + PD TF++LL ACSHAGLV
Sbjct: 170 FRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLV 229
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG +F +M + P+++HY C+VDLL R ++ +A I MP++ +SV+W+ LLG
Sbjct: 230 DEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLG 289
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR G LAE ++ +LEP +V +SN+Y ++ A +RK+MK + K
Sbjct: 290 ACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKT 349
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK-GMGYVPETSLALHDIEEEH 509
PG SWIE+ +H+F +G + H Q E I+ +EE+ ++ G+VP T+ L DIEEE
Sbjct: 350 PGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEE 409
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
KE L+ HSEKLA+ +++ S S IRI+KN+R+C DCH+F+K+ S + +EIV
Sbjct: 410 KEHSLFLHSEKLAIALGLISTPS----GSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVA 465
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD +RFHHFK+ CSC D+W
Sbjct: 466 RDRSRFHHFKEGSCSCMDFW 485
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA G + Q +H +I+ F DL + L++MYAK G +D A +F M
Sbjct: 118 VLSACAQTGALDQGKYIH-LLIDKFEINC-DLVLETALVDMYAKCGSIDLALQVFRRMRV 175
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLV---- 125
RNV +W A+I G A HG+ E+ LF + P++ + ++L +C H LV
Sbjct: 176 RNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACS--HAGLVDEGL 233
Query: 126 ---HALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFR- 179
A+ KF ++ + ++++ ++ D+A ENM + N + W +++ A R
Sbjct: 234 AMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRS 293
Query: 180 ------ACKLEAQAIE--------------LFAKMKNEEEALFLFRQLQREGM 212
A K+ + IE L+A + + AL L +Q++ +G+
Sbjct: 294 GGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGI 346
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 214/606 (35%), Positives = 323/606 (53%), Gaps = 34/606 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A L CA +++ +LH + + D V L YA LD L
Sbjct: 39 AGLLTGCA---TLRRTGELHAAAVRAGVD--GDRAVGFRLQRAYAASDRLDLTVTLLRLT 93
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-GKLVH 126
P V +T+ I ++ G L +L + P +L+S L +C L G+ +H
Sbjct: 94 PDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLALGRALH 153
Query: 127 ALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A A K +L YVA AL+ MY++ AD A +F+ M +V+ +M+ +
Sbjct: 154 AYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALD 213
Query: 186 QAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACA 227
A ELF M +++ EAL LFR + R G+ PD + L A A
Sbjct: 214 DARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVA 273
Query: 228 GLVTERHASAVHSLIA-KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
L T +HS + + + + ALI Y +CGS+ + VF+ + D+V WN
Sbjct: 274 QLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWN 333
Query: 287 SILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
+++ YA+HG +++AL++FS + Q P TF+ LL+ACSH+GLV EG++ F SM E
Sbjct: 334 AMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEE 393
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL 403
+ +VP+++HY CMVDLLGR G I EA L++ M + PD+V+W LL +CR H L +
Sbjct: 394 YAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQ 453
Query: 404 AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVH 463
A L +S ++ +SNIY G++ + +R MK S ++K PG S IE+ +V+
Sbjct: 454 IADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVY 513
Query: 464 EFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLAL 523
EF +G HP+ + I+ LE++ G +K G+VP+T L LHD++E KE+ L HSEKLA+
Sbjct: 514 EFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAV 573
Query: 524 VFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRIC 583
F +++ I+I+KN+R C DCH +KL S + G++IV RD NRFHHF D C
Sbjct: 574 AFGLISTA----PGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSC 629
Query: 584 SCNDYW 589
+C DYW
Sbjct: 630 TCGDYW 635
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 214/606 (35%), Positives = 323/606 (53%), Gaps = 34/606 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A L CA +++ +LH + + D V L YA LD L
Sbjct: 38 AGLLTGCA---TLRRTGELHAAAVRAGVD--GDRAVGFRLQRAYAASDRLDLTVTLLRLT 92
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-GKLVH 126
P V +T+ I ++ G L +L + P +L+S L +C L G+ +H
Sbjct: 93 PDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLALGRALH 152
Query: 127 ALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
A A K +L YVA AL+ MY++ AD A +F+ M +V+ +M+ +
Sbjct: 153 AYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALD 212
Query: 186 QAIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACA 227
A ELF M +++ EAL LFR + R G+ PD + L A A
Sbjct: 213 DARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVA 272
Query: 228 GLVTERHASAVHSLIA-KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
L T +HS + + + + ALI Y +CGS+ + VF+ + D+V WN
Sbjct: 273 QLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWN 332
Query: 287 SILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
+++ YA+HG +++AL++FS + Q P TF+ LL+ACSH+GLV EG++ F SM E
Sbjct: 333 AMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEE 392
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL 403
+ +VP+++HY CMVDLLGR G I EA L++ M + PD+V+W LL +CR H L +
Sbjct: 393 YAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQ 452
Query: 404 AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVH 463
A L +S ++ +SNIY G++ + +R MK S ++K PG S IE+ +V+
Sbjct: 453 IADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVY 512
Query: 464 EFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLAL 523
EF +G HP+ + I+ LE++ G +K G+VP+T L LHD++E KE+ L HSEKLA+
Sbjct: 513 EFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAV 572
Query: 524 VFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRIC 583
F +++ I+I+KN+R C DCH +KL S + G++IV RD NRFHHF D C
Sbjct: 573 AFGLISTA----PGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSC 628
Query: 584 SCNDYW 589
+C DYW
Sbjct: 629 TCGDYW 634
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 299/545 (54%), Gaps = 48/545 (8%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNA-------EECFRLFCSLLQYFFPNEFSL 110
++ A LFD++ + N+V + + GYA+ + C RL + +L
Sbjct: 77 MEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCLRLVSKVK--------AL 128
Query: 111 ASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNV 168
A GK +H A+K + ++YV LINMY+ +C D + +VF+ ++ V
Sbjct: 129 A---------EGKQLHCFAVKLGVSDNMYVVPTLINMYT-ACGDIDASRRVFDKIDEPCV 178
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+++N++I + A+ EAL LFR+LQ G+ P T +VL +CA
Sbjct: 179 VAYNAIIMSL-------------ARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCAL 225
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
L + +H + KYGF+ + LI YA+CGS+ + VF M D +W++I
Sbjct: 226 LGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAI 285
Query: 289 LKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ AYA HG +A+ + + M VQPD TF+ +L ACSH GLV+EG + FH M +G
Sbjct: 286 IVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYG 345
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+VP + HY CMVDLLGR GR+ EA K I E+P++P ++W LL +C HG + +
Sbjct: 346 IVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVI 405
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
++ +L+ +V SN+ G ++ +RK M K PG S IE+ N VHEF
Sbjct: 406 ERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEF 465
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH-DIEEEHKEEQLYHHSEKLALV 524
+G H + + L+EL+ +LK GYVP+TSL + D+E+E KE L +HSEKLA+
Sbjct: 466 FAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAIT 525
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
F ++N + IR++KN+R+C DCHN K S + G++I++RD RFHHFKD CS
Sbjct: 526 FGLLNTPP----GTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCS 581
Query: 585 CNDYW 589
C DYW
Sbjct: 582 CGDYW 586
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 153/346 (44%), Gaps = 57/346 (16%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+++V LINMY G +D +R +FD++ + VV++ A+I A++ A E LF L
Sbjct: 145 DNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFREL 204
Query: 100 LQYFF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA- 153
+ P + ++ VL SC L G+ +H K+ D +V V LI+MY+K +
Sbjct: 205 QEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSL 264
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D+A VF +M R+ +W+++I A+ QAI + +MK +E +
Sbjct: 265 DDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMK-------------KEKVQ 311
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD TF +L AC+ H+ + + GFE + + + Y SI
Sbjct: 312 PDEITFLGILYACS-----------HNGLVEEGFE----YFHGMTNEYGIVPSIK----- 351
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEG 333
+ ++ G+ EA + + ++P + +LLSACS G V+ G
Sbjct: 352 ----------HYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMG 401
Query: 334 NKVFHSMLE---NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
+V + E +HG Y +L R G+ + L + M
Sbjct: 402 KRVIERIFELDDSHG-----GDYVIFSNLCARYGKWDDVNHLRKTM 442
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ +CAL G++ +HE+ + + + + + V LI+MYAK G LDDA ++F +MPK
Sbjct: 219 VLSSCALLGSLDLGRWMHEY-VKKYGFD-RYVKVNTTLIDMYAKCGSLDDAVNVFRDMPK 276
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLV---- 125
R+ +W+A+I YA HG+ + + + + P+E + +L +C H LV
Sbjct: 277 RDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACS--HNGLVEEGF 334
Query: 126 ---HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV-ISWNSMIAA 177
H + ++ + + ++++ ++ DEA+K + + + I W ++++A
Sbjct: 335 EYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSA 391
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 316/571 (55%), Gaps = 33/571 (5%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFP 105
L++ YA+ L DAR FD+ P+R++ ++AL++ + + E L +L P
Sbjct: 42 LVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALRP 101
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVF 160
+ F LAS+ + L G+ +HA A V ++LI+MY K +A KVF
Sbjct: 102 DHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVF 161
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK------------------NEEEALF 202
+++ +N + W ++I+ + + +A++LF M N A+
Sbjct: 162 DSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMG 221
Query: 203 LFRQLQREGMAP-DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
LF +++R+ + D + V+ A L +H + + GF ++ NAL+ Y
Sbjct: 222 LFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMY 281
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
++C I +++VF+ +T D++SW +IL A HG+A+E L++ M ++P+ TFV
Sbjct: 282 SKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFV 341
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
L+ ACSHAGLVQ+G ++F SM +G+ P + HY C +DLL R G + EAEKLI MP
Sbjct: 342 GLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPY 401
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
EPD W LL +C+KH +T++ A L +L P D ++ +SN+Y ++ ++ +
Sbjct: 402 EPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKV 461
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
RK M +RK PG SW+E F +G E I LEEL+ +++ GYVP+T
Sbjct: 462 RKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDT 521
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
S +HD+EE KE+ L+ HSE+LA+ F I+ SVIR++KN+R+C DCH MK
Sbjct: 522 SSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPP----GSVIRVVKNLRVCGDCHTVMKF 577
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + ++I+VRD++RFHHF+D CSC+++W
Sbjct: 578 ISAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 162/360 (45%), Gaps = 65/360 (18%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEP--QDLFVTNHLINMYAKFGYLDDARHL 64
+ A+L A +++ QLH H F P D V + LI+MY K G DAR +
Sbjct: 105 VLASLASAAGRLRSLRLGRQLHAH----FAASPYSADNVVKSSLIDMYCKCGVPQDARKV 160
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-----------LLQYFFP-------- 105
FD + +N V WTALISGYA +G E LF S L+ F
Sbjct: 161 FDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAM 220
Query: 106 --------------NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINM 147
+ F LA+V+ L G+ +H ++ + + V NAL++M
Sbjct: 221 GLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDM 280
Query: 148 YSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFR 205
YSK C+D A +VFE + R+VISW +++ EAQ EE L+
Sbjct: 281 YSK-CSDIHSAREVFEGITVRDVISWTTILVG------EAQ-------HGRAEEVFALYN 326
Query: 206 QLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
++ GM P+ TF ++ AC AGLV ++ S+ +YG + + +R
Sbjct: 327 RMLLAGMKPNEVTFVGLIYACSHAGLV-QKGRQLFDSMKREYGMKPGVQHYTCYLDLLSR 385
Query: 264 CGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSN-MNVQP-DSATFVSL 320
G +S ++++ M Y D +W ++L A H + L++ N + ++P D +T++ L
Sbjct: 386 SGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILL 445
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDD 60
+H + AT+ A + QLH ++ F + + V N L++MY+K +
Sbjct: 233 IHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSS---MIVGNALVDMYSKCSDIHS 289
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQYFFPNEFSLASVLISCDY 119
AR +F+ + R+V+SWT ++ G AQHG AEE F L+ LL PNE + ++ +C
Sbjct: 290 AREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACS- 348
Query: 120 LHGKLVH-------ALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFR-NVIS 170
H LV ++ ++ + V +++ S+S EA K+ M + + +
Sbjct: 349 -HAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEAT 407
Query: 171 WNSMIAA 177
W ++++A
Sbjct: 408 WGALLSA 414
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 18/216 (8%)
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
R VH+ + K G D L+ AYAR + +++ FD DL ++++L A
Sbjct: 18 RAVRRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAV 77
Query: 293 ALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ + L L M ++PD SL SA ++ G + H+
Sbjct: 78 SHSSDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQ-LHAHFAASPYSA 136
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
+ ++D+ + G +A K+ + ++ +SV+W+ L+ +G T A L
Sbjct: 137 DNVVKSSLIDMYCKCGVPQDARKVFDSIGVK-NSVVWTALISGYASNGCTG----EALDL 191
Query: 409 KQLEPGDSL--------GFVQMSNIYCLSGSFNKAR 436
Q P L GFV+ N G F + R
Sbjct: 192 FQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMR 227
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 214/604 (35%), Positives = 335/604 (55%), Gaps = 38/604 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ +AT AC+ G++++ ++H + + P + + + +MYAK G L A+
Sbjct: 138 TAMTFATALSACSSLGDLQRGREIHARIKASRGIRPS-VILDTAIFSMYAKCGDLSTAKS 196
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAE-ECFRLFCSLLQYFF-PNEFSLASVLISC---- 117
+FD +P +NVVSW ALI+ YAQ G++ + LF + ++ P + VL +C
Sbjct: 197 VFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVT 256
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSM 174
+ +H ++V L+F + V V NAL+NMY+K + E A +F M+ R+ +S N M
Sbjct: 257 SLEKIHARIVET-GLQFDVR-DVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVM 314
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLV-- 230
IA F A+ +E++ +FR++ EG+ D TF+ V+ AC+ G +
Sbjct: 315 IATF-------------AQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEF 361
Query: 231 -TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
H V ++ + + V+ AL+ Y +CG++ +K VF MT + VSWN++L
Sbjct: 362 GKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAML 421
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
A A GQ EA V+ DSA+F+S+L ACSH+G+++ F ML + +
Sbjct: 422 AACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDL 481
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
VP ++Y CMVDLL R GR+ +A++L+ MP PD++ W LLG CR G A AA
Sbjct: 482 VPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAE 541
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK-YPGLSWIEIENRVHEF 465
+ LEP ++ + +S++Y +G ++ +R MK +RK PG S IE+ RVHEF
Sbjct: 542 QAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEF 601
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
+G HPQ + I ++L+ L +LK G+VP T +HD++ E KEE L HSEKLA+ F
Sbjct: 602 VAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAF 661
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
+++ S + ++KN+R+C DCH +KL S L + I VRD+NRFH F+ CSC
Sbjct: 662 GLISTKSGIP----LLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSC 717
Query: 586 NDYW 589
DYW
Sbjct: 718 GDYW 721
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 192/372 (51%), Gaps = 36/372 (9%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
++ N L+ M AK G L +AR +FD + +N+ SW +IS YA G+ LF +
Sbjct: 77 YLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKM--D 134
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHA-LALKFSLDAHVYVANALINMYSKSCAD--E 155
P + A+ L +C D G+ +HA + + V + A+ +MY+K C D
Sbjct: 135 VPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAK-CGDLST 193
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A VF+ + +NV+SWN++IAA+ AQ+ + +AL LF ++ G+ P
Sbjct: 194 AKSVFDRIPAKNVVSWNALIAAY------AQS------GHSHHQALDLFEKMAEHGVRPC 241
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFE---DDTVIANALIHAYARCGSISLSKQ 272
TF VL AC + + +H+ I + G + D + NAL++ YA+CGS+ +++
Sbjct: 242 RATFVGVLGACNDVTS---LEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARD 298
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGL 329
+F KM D VS N ++ +A G KE++Q+F M+++ D TF S+++ACS G
Sbjct: 299 IFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGA 358
Query: 330 VQEG----NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
++ G +V +L +P + +V + G+ G + +A+ + + M + +SV W
Sbjct: 359 LEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTK-NSVSW 417
Query: 386 SVLLGSCRKHGE 397
+ +L +C G+
Sbjct: 418 NAMLAACAHQGQ 429
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+F+ +++C S +H I + G + N L+ A+ GS+ ++ +FD +
Sbjct: 46 SFAAAIRSCK---DSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVF 337
+ ++ SWN I+ AYA G AL LF+ M+V P + TF + LSACS G +Q G ++
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVPPTAMTFATALSACSSLGDLQRGREIH 162
Query: 338 HSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ + G+ P + + + + G + A+ + +P + + V W+ L+ + + G
Sbjct: 163 ARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAK-NVVSWNALIAAYAQSGH 221
Query: 398 T 398
+
Sbjct: 222 S 222
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 326/601 (54%), Gaps = 36/601 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S ++ A C I + ++H H++ ++ N L+ MY K G L A+
Sbjct: 56 SAEVLAWYLRRCGSEAAIAEGKRIHYHIV--LCGFKSSRYLCNLLVEMYGKCGSLQAAKS 113
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL-- 120
+F P+RNV SWT +++ +A +G+ + L + L+ PN + +L + L
Sbjct: 114 VFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSW 173
Query: 121 --HGKLVHALALKFSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIA 176
G+ +H A ++VAN LINMY+K S AD A VFE++ R+VI+W +++A
Sbjct: 174 LDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLAD-ACSVFESLTSRSVIAWTALVA 232
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A+ A+ F + +AL +F + +G+ P TF V+ CA +
Sbjct: 233 AY--------ALNGFFR-----DALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGR 279
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
VH +I E + + NALI+ Y +C S +++VFD M D+++WNS++ Y +G
Sbjct: 280 EVHGVIDARS-EANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNG 338
Query: 297 QAKEALQLFSNM--------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+AL+++ M + D TF+ +L ACSHAGLV++ K++ SM+ ++G P
Sbjct: 339 YGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKP 398
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
C++DLLGR G + EAE+ I MP PD IW++LLG+C H + A AA ++
Sbjct: 399 TSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRI 458
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
L P DS +V +SN+Y L+ ++ +RK M V K G S IEI +HEF +G
Sbjct: 459 MALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAG 518
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HP++ I+++L + G ++ GYVP+ LH+ E KE+ HSE+LA+ F ++
Sbjct: 519 DTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMI 578
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ + +RIMKN+R+C DCH+ K+ S G++I+VRD+NRFH F++ CSC DY
Sbjct: 579 SSPG----GTELRIMKNLRVCPDCHSATKIISKFSGRKIIVRDANRFHEFRNGSCSCEDY 634
Query: 589 W 589
W
Sbjct: 635 W 635
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
L+ ++P + L+ C +H I GF+ + N L+ Y +CGS
Sbjct: 48 LEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGS 107
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSA 323
+ +K VF ++ SW ++ A+A +G +AL L M+ + P+S TF+ LL A
Sbjct: 108 LQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGA 167
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
+ + G + H + G + + C++++ + + +A + + SV
Sbjct: 168 VAALSWLDRG-RALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSR--SV 224
Query: 384 I-WSVLLGSCRKHGETR--LAELAATKLKQLEPGDSLGFVQMSNI 425
I W+ L+ + +G R L L +EP + + FV + ++
Sbjct: 225 IAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTE-VTFVTVVDV 268
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 215/642 (33%), Positives = 325/642 (50%), Gaps = 95/642 (14%)
Query: 23 QAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR-NVVSWTALIS 81
QA QLH ++ P L + ++++Y+ L D+ +F+ +P ++W ++I
Sbjct: 23 QAKQLHAQILRTSLPSPSLL---STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIR 79
Query: 82 GYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISC----DYLHGKLVHALALKFSLDA 136
Y HG F +L +P+ SVL SC D G+ VH ++ +
Sbjct: 80 CYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGF 139
Query: 137 HVYVANALINMYSK-----------SCADEA-------------------WKVFENMEFR 166
+Y NAL+NMYSK DE KVFE M R
Sbjct: 140 DLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKR 199
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
+++SWN++I+ A+ E+AL + R++ + PD T S VL
Sbjct: 200 DIVSWNTVISGN-------------AQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIF 246
Query: 227 AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWN 286
A V +H + G++ D I ++LI YA+C + S +VF + HD +SWN
Sbjct: 247 AEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWN 306
Query: 287 SILKAYALHGQAKEALQLFSNM-------------------------------------- 308
SI+ +G E L+ F M
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRM 366
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
V+P+ F+++L+ACSHAGLV E K F+SM +++ ++P L+HYA + DLLGRVGR+
Sbjct: 367 EGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLE 426
Query: 368 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 427
EA + I +M +EP +WS LL +CR H LAE + KL ++P + +V +SNIY
Sbjct: 427 EAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYS 486
Query: 428 LSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIG 487
+G + AR +R M+ ++K P SWIEI+N+VH F +G K HP + I + L+ L+
Sbjct: 487 AAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLE 546
Query: 488 QLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
Q++ GYV +T+ LHD+EEE K L HSE+LA+ F I++ + + IR+ KN+R
Sbjct: 547 QMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPA----GTTIRVTKNLR 602
Query: 548 ICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+CVDCH K S ++G+EIVVRD++RFHHFKD CSC D+W
Sbjct: 603 VCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 205/593 (34%), Positives = 331/593 (55%), Gaps = 29/593 (4%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
+AC+ +I Q H +I D + N L ++Y+KFG LD + F E ++
Sbjct: 88 LNACSSLESITLGKQFHAFIIK--YRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEK 145
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH----GKLVH 126
+V+SWT +IS +G A RLF +L + PN+F+L SVL C + G VH
Sbjct: 146 DVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVH 205
Query: 127 ALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+L+ K ++++ + N+L+ +Y K C DEA +F ME++N+I+WN+MIA A
Sbjct: 206 SLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAG------HA 259
Query: 186 QAIEL----FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
QA++L F+ + EAL ++ +L R G PD T S +L C+ L +H+
Sbjct: 260 QAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQ 319
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K GF D V+ AL+ Y +CGSI +++ F M+ L+SW S++ ++A HGQ++ A
Sbjct: 320 TIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHA 379
Query: 302 LQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQLF +M + +P+ TFV +L+ACSHAG+V E + F M + + + P +DHY C+VD
Sbjct: 380 LQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVD 439
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
+ R+GR+ EA +I+ M +EP+ IW +L+ CR HG L AA +L +L+P +
Sbjct: 440 MFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTET 499
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V + N+Y + + ++R+ MK +V K S I I+ VH F + + H +
Sbjct: 500 YVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEVHSFKTNNRLHNHNAEL 559
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY----HHSEKLALVFAIMNQGSLC 534
L +L+ + K +GY ++ + D EEE EE+ + +HSEKLA+ F ++N
Sbjct: 560 HTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVYHSEKLAVTFGLLNTPI-- 617
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCND 587
+ IR++K++ +C DCH+FMK+ S + I+++D R H F + CSC D
Sbjct: 618 --GAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFVNGQCSCAD 668
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 200/395 (50%), Gaps = 37/395 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H H+I +E + FV + L+N+YAK G + +AR +FD +P+RNVV WT L++GY Q+
Sbjct: 2 VHAHVIKTGTHE--EFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQN 59
Query: 87 GNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVA 141
E +F +L+ FP+ F+L+ L +C L GK HA +K+ + +
Sbjct: 60 SQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIG 119
Query: 142 NALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
NAL ++YSK D + K F ++VISW ++I+A + LF +M
Sbjct: 120 NALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEM------ 173
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
LF E + P+ T + VL C+ + + VHSL K G E + I N+L++
Sbjct: 174 LF-------ENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYL 226
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYA-----------LHGQAKEALQLFSNMN 309
Y +CG I +K +F++M Y +L++WN+++ +A EAL ++ +N
Sbjct: 227 YLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLN 286
Query: 310 ---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI 366
+PD T S+L+ CS +++G ++ H+ G + + +VD+ + G I
Sbjct: 287 RSGRKPDLFTLSSILTVCSRLAALEQGEQI-HAQTIKSGFLSDVVVGTALVDMYDKCGSI 345
Query: 367 LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
A K +M + W+ ++ S +HG+++ A
Sbjct: 346 ERARKAFLDMSTRT-LISWTSMITSFARHGQSQHA 379
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 137/300 (45%), Gaps = 25/300 (8%)
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+VHA +K +V + L+N+Y+K A KVF+N+ RNV+ W +++ +
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A+E+F M G P T SI L AC+ L + H+ I
Sbjct: 61 QPEVAVEVFGDM-------------LESGSFPSNFTLSIALNACSSLESITLGKQFHAFI 107
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
KY D+ I NAL Y++ GS+ S + F + D++SW +I+ A +G+A L
Sbjct: 108 IKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGL 167
Query: 303 QLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+LF M NV+P+ T S+LS CS G +V HS+ G L +V L
Sbjct: 168 RLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQV-HSLSTKLGHESNLRITNSLVYL 226
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG-DSLG 418
+ G I EA+ L M + + + W+ ++ G + +LA + G ++LG
Sbjct: 227 YLKCGCIDEAKNLFNRMEYK-NLITWNAMIA-----GHAQAMDLAKDNFSAQQTGTEALG 280
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 312/577 (54%), Gaps = 39/577 (6%)
Query: 48 LINMYAKFGYLDD---ARHLFDEMPKRNVVSWTALISGY--AQHGNAEECFRLFCSLLQ- 101
LIN A+ D A LFD +P+ + + +I G+ +Q L+ +LQ
Sbjct: 60 LINFCARASTSDALTYALKLFDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQN 119
Query: 102 YFFPNEFSLASVLISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKV 159
PN F+ S+LI+C + HG +HA KF AH N+LI+MY A +EA +V
Sbjct: 120 SVLPNNFTFPSLLIACRKIQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRV 179
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------------EAL 201
F + + +SW S+I+ + L +A +F M + EA
Sbjct: 180 FHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAF 239
Query: 202 FLFRQLQREGM-APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
LF +++ E D + +L AC GL +H I + G E D+ + A++
Sbjct: 240 ALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDM 299
Query: 261 YARCGSISLSKQVFDKMTY--HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSA 315
Y +CG + + QVF + + SWN ++ A+HG + A+QLF M V PD
Sbjct: 300 YCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDI 359
Query: 316 TFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIRE 375
TF++LL+AC+H+GLV+EG F M+ +G+ P+++H+ CMVDLLGR G + EA KLI E
Sbjct: 360 TFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDE 419
Query: 376 MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
MP+ PD + LLG+C+KH L E ++ +LEP +S +V ++N+Y +G + A
Sbjct: 420 MPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDA 479
Query: 436 RLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYV 495
+RK M V+K PG S IE++ VHEF +G + HPQ + + K+ E++ LK +GYV
Sbjct: 480 AKVRKLMDDRGVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYV 539
Query: 496 PETSLALHD---IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDC 552
+T+ LH EEE E LY+HSEKLA+ F + S + +RI+KN+RIC DC
Sbjct: 540 ADTNGVLHGHDFDEEEDGENPLYYHSEKLAIAFGL----SRTKPGETLRILKNLRICEDC 595
Query: 553 HNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
H+ KL S + +EI+VRD RFH FK CSC DYW
Sbjct: 596 HHACKLISTVFDREIIVRDRTRFHRFKMGQCSCQDYW 632
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 184/411 (44%), Gaps = 71/411 (17%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +L AC I+ MQ+H H+ F + + N LI+MY F L++AR +F
Sbjct: 128 FPSLLIACR---KIQHGMQIHAHLFK-FGFGAHSVCL-NSLIHMYVTFQALEEARRVFHT 182
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ------------YFFPNEFSLA---- 111
+P + VSWT+LISGY++ G +E F +F + Q Y N F A
Sbjct: 183 IPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALF 242
Query: 112 -----------------SVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK 150
++L +C L GK +H + ++ + A+++MY K
Sbjct: 243 DRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCK 302
Query: 151 -SCADEAWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
C ++A +VF ++ R + SWN MI A N E A+ LF+++
Sbjct: 303 CGCLEKALQVFHSLPLPCRWISSWNCMIGG-------------LAMHGNGEAAIQLFKEM 349
Query: 208 QREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+R+ +APD TF +L ACA GLV E + +I YG E ++ R G
Sbjct: 350 ERQRVAPDDITFLNLLTACAHSGLVEEGR-NYFSYMIRVYGIEPRMEHFGCMVDLLGRAG 408
Query: 266 SISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSN-MNVQP-DSATFVSLLS 322
+ ++++ D+M D+ ++L A H + ++ + ++P +S +V L +
Sbjct: 409 MVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLAN 468
Query: 323 ACSHAGLVQEGNKVFHSMLENHGV--VPQLDHYACMVDLLGRVGRILEAEK 371
++AG ++ KV ++++ GV P M++L G V + E+
Sbjct: 469 LYANAGKWEDAAKV-RKLMDDRGVKKAPGFS----MIELQGTVHEFIAGER 514
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ T+ AC G + Q +HE++ N D +T +++MY K G L+ A +F
Sbjct: 257 VATTMLSACTGLGALDQGKWIHEYIKRN--GIELDSKLTTAIVDMYCKCGCLEKALQVFH 314
Query: 67 EMPK--RNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGK 123
+P R + SW +I G A HGN E +LF + Q P++ + ++L +C H
Sbjct: 315 SLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTAC--AHSG 372
Query: 124 LVHALALKFSLDAHVY 139
LV FS VY
Sbjct: 373 LVEEGRNYFSYMIRVY 388
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 208/601 (34%), Positives = 337/601 (56%), Gaps = 38/601 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH---LFDEMPKRNVVSW 76
+ A QLH H+ N N Q +V +L+ ++ + LF ++ N +
Sbjct: 23 TLNHAKQLHAHIYRN--NLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLY 80
Query: 77 TALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASV--LISCDYLHGKLVHALALKFS 133
+ALI YA++G RL+ S+L P F+ +++ L+ L G +H A F
Sbjct: 81 SALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL-GSQLHLHAFLFG 139
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
+YV N +I+MY K D A KVF+ M R+V++W +I A+ A ELF
Sbjct: 140 FVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFV 199
Query: 193 KMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ ++ +AL FR+++ G+ D T + ACA L +
Sbjct: 200 GLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGY 259
Query: 235 ASAVHSLI--AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
A + + +++G + + +ALI Y++CG++ + VF M ++ S++S++ +
Sbjct: 260 ADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGF 319
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
A+HG+A+ A++LF M ++P+ TFV L +ACSHAG+V++G ++F +M E +GV P
Sbjct: 320 AVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPT 379
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
DHYACM DLLGR G + +A +L++ MPMEP+ +W LLG+ HG +AE+A+ L
Sbjct: 380 ADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLF 439
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR-VHEFASG 468
+LEP + ++ +S Y L+ ++ +RK M+ ++RK PG SW+E +N +HEF +G
Sbjct: 440 ELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAG 499
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+HP+ I K L++L+ +LK GY P+ + +DI++E K L HSEKLAL + ++
Sbjct: 500 DVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLL 559
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ + S I+IMKN+RIC DCH M AS L G++I+VRD+ RFHHF + CSCN++
Sbjct: 560 STDA----GSTIKIMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNF 615
Query: 589 W 589
W
Sbjct: 616 W 616
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 302/557 (54%), Gaps = 59/557 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRN----VVSWTALISGYAQHGNAEECFRLF 96
D FV L++MY K G L LFDE P+RN ++ W LI+G + G+ + LF
Sbjct: 172 DSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLF 231
Query: 97 CSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DE 155
++ + +A + N+LIN + ++ D
Sbjct: 232 EAMPER--------------------------------NAGSW--NSLINGFVRNGDLDR 257
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A ++F M +NV+SW +MI F ++ + E+AL +F ++ EG+ P+
Sbjct: 258 ARELFVQMPEKNVVSWTTMINGF-------------SQNGDHEKALSMFWRMLEEGVRPN 304
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T L AC + + +H+ ++ GF+ + I AL+ YA+CG+I + +VF
Sbjct: 305 DLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFV 364
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+ DL++W+ ++ +A+HG +ALQ F M + PD F+++L+ACSH+G V +
Sbjct: 365 ETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQ 424
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G F SM ++ + P + HY +VDLLGR GR+ EA I+ MP+ PD VIW L +C
Sbjct: 425 GLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCAC 484
Query: 393 RKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPG 452
R H +AEL A KL QLEP +V +SN+Y G + +R MK V K PG
Sbjct: 485 RAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPG 544
Query: 453 LSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE 512
S+IE+E +VH F +G H + E I KLEE+ K GY+PET+ LH+IEEE KE+
Sbjct: 545 WSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKED 604
Query: 513 QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
L HSEKLAL F +++ S IRI+KN+R+C DCH+ MK AS L +EI++RD
Sbjct: 605 ALGSHSEKLALAFGLISTAP----GSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDI 660
Query: 573 NRFHHFKDRICSCNDYW 589
RFHHFKD CSC DYW
Sbjct: 661 KRFHHFKDGTCSCGDYW 677
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 126/345 (36%), Gaps = 91/345 (26%)
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA----DEAWKVFENMEFRNVISWNSMIAAFRA 180
+HA +L ++ V LI S SC+ D A +F + N+ +N++I
Sbjct: 59 IHAQIFLHNLFSNSRVVTQLI---SSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGL-- 113
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+ E ++ F + R + PD T VLK+ A LV +H
Sbjct: 114 -----------AENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHG 162
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK------------------------ 276
+ K G E D+ + +L+ Y + G + Q+FD+
Sbjct: 163 GVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVG 222
Query: 277 -----------MTYHDLVSWNSILKAYALHGQAKEALQLFSNM----------------- 308
M + SWNS++ + +G A +LF M
Sbjct: 223 DLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQ 282
Query: 309 -----------------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
V+P+ T VS L AC+ G +Q G ++ H+ L ++G
Sbjct: 283 NGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERI-HNYLSSNGFQLNRG 341
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
+VD+ + G I A ++ E + D + WSV++ HG
Sbjct: 342 IGTALVDMYAKCGNIKSASRVFVETKGK-DLLTWSVMIWGWAIHG 385
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/565 (35%), Positives = 311/565 (55%), Gaps = 32/565 (5%)
Query: 53 AKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS-LLQY-FFPNEFSL 110
+K G ++ A LF +P + + L + LF S +LQ+ PN F+
Sbjct: 47 SKHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTF 106
Query: 111 ASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNV 168
S++ +C K +HA LKF Y N LI++Y + D+A +VF M NV
Sbjct: 107 PSLIRACKLEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNV 166
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKM---KNE----------------EEALFLFRQLQR 209
+SW S+++ + L +A +F M KN EA LFR+++
Sbjct: 167 VSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRV 226
Query: 210 EG-MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
E M D + +L AC G+ +H + K G D+ +A +I Y +CG +
Sbjct: 227 EKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLD 286
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSAC 324
+ VF + + SWN ++ +A+HG+ ++A++LF M V PDS TFV++L+AC
Sbjct: 287 KAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTAC 346
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+H+GLV+EG F M++ HG+ P +HY CMVDLL R GR+ EA+K+I EMPM PD+ +
Sbjct: 347 AHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAV 406
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
LLG+CR HG L E ++ +L+P +S +V + N+Y G + + +RK M
Sbjct: 407 LGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDD 466
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
V+K PG S IE+E V+EF +GG+ HP EAI+ K+ E++ ++ +G+VP+T LHD
Sbjct: 467 RGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHD 526
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
+ EE +E L++HSEKLA+ + ++ + +R+ KN+R+C DCH K+ S +
Sbjct: 527 LVEEERENPLFYHSEKLAIAYGLLKT----KRGETLRVTKNLRVCKDCHQASKMISKVYD 582
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+I++RD +RFHHF + CSC DYW
Sbjct: 583 CDIIIRDRSRFHHFSNGECSCKDYW 607
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 165/383 (43%), Gaps = 104/383 (27%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +L AC L ++A QLH H++ F D + N+LI++Y FG LDDAR +F
Sbjct: 106 FPSLIRACKLE---EEAKQLHAHVLKFGFGG---DTYALNNLIHVYFAFGSLDDARRVFC 159
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF-----------------CSLLQYFFPNEFS 109
M NVVSWT+L+SGY+Q G +E FR+F C + F F+
Sbjct: 160 TMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFA 219
Query: 110 L-----------------ASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMY 148
L A++L +C + G +H K + +A +I+MY
Sbjct: 220 LFRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMY 279
Query: 149 SK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K C D+A+ VF ++ + V SWN MI FA E+A+ LF+++
Sbjct: 280 CKCGCLDKAFHVFCGLKVKRVSSWNCMIGG-------------FAMHGKGEDAIRLFKEM 326
Query: 208 QREGM-APDWCTFSIVLKACA--GLVTE-----RHASAVHSLIAKYGFEDDTVIANALIH 259
+ E M APD TF VL ACA GLV E R+ VH G + ++
Sbjct: 327 EEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVH------GIDPTKEHYGCMVD 380
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVS 319
AR G + +K+V D+M + PD+A +
Sbjct: 381 LLARAGRLEEAKKVIDEMP-------------------------------MSPDAAVLGA 409
Query: 320 LLSACSHAGLVQEGNKVFHSMLE 342
LL AC G ++ G +V + ++E
Sbjct: 410 LLGACRIHGNLELGEEVGNRVIE 432
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ AT+ AC G ++Q M +H+++ L T +I+MY K G LD A H+F
Sbjct: 236 VAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATT--IIDMYCKCGCLDKAFHVFC 293
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDYLHGKL 124
+ + V SW +I G+A HG E+ RLF + + P+ + +VL +C H L
Sbjct: 294 GLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTAC--AHSGL 351
Query: 125 VHA--LALKFSLDAH 137
V ++ +D H
Sbjct: 352 VEEGWYYFRYMVDVH 366
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 205/584 (35%), Positives = 327/584 (55%), Gaps = 36/584 (6%)
Query: 20 NIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
++ + +QLH H+I P +++HLIN Y+K + +F + P ++ +W++
Sbjct: 35 SLPKGLQLHAHIIKLGLQTIP---LLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSS 91
Query: 79 LISGYAQHGN---AEECFRLFCSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALK 131
+IS +AQ+ + FRL L Q P++ S SC L K++H ALK
Sbjct: 92 VISSFAQNDLPLLSLNYFRLM--LRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALK 149
Query: 132 FSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
+ ++V +++I+MY+K C D A VF+ M +RNV+SW+ +I + + +++
Sbjct: 150 TAYHLDIFVGSSVIDMYAK-CGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLR 208
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
LF + EEE EG+ D+ T S VL+ C G + +H L K F+
Sbjct: 209 LFKRFLVEEE---------NEGVN-DF-TLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDS 257
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+A++LI Y++CG + + VF+++T +L WN++L A A H + +LF M
Sbjct: 258 SCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMK 317
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
++ + TF+ +L ACSHAGLV++G K + +++++G+ P HY+ MVDLLGR G+
Sbjct: 318 SVGGMKANFITFLCVLYACSHAGLVEKG-KYYFELMKDYGIEPGTQHYSTMVDLLGRAGK 376
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNI 425
+ +A KLI EMPMEP +W LL CR HG T+LA A ++ +L S V +SN
Sbjct: 377 LNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNA 436
Query: 426 YCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEEL 485
Y +G + +A RK M+ ++K GLSW+E NR+H FA+G + H + I+ KL+EL
Sbjct: 437 YAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDEL 496
Query: 486 IGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKN 545
++ GYV +TS L +++ E K + +HSE+LA+ F + IR+MKN
Sbjct: 497 GEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFIT----FPHGQPIRVMKN 552
Query: 546 IRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+R+C DCH +K S G+ I+VRD+NRFH F+D C+C DYW
Sbjct: 553 LRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 139/296 (46%), Gaps = 21/296 (7%)
Query: 109 SLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRN 167
+L S+ S G +HA +K L +++ LIN YSK+ + ++F + ++
Sbjct: 26 TLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKS 85
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
+W+S+I++F L ++ FR + R+G+ PD F K+C
Sbjct: 86 ATTWSSVISSFAQNDLPLLSLN-------------YFRLMLRQGVPPDDHIFPSATKSCG 132
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
L + A +H K + D + +++I YA+CG I + VFD+M Y ++VSW+
Sbjct: 133 ILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSG 192
Query: 288 ILKAYALHGQAKEALQLFSNMNVQPDSA-----TFVSLLSACSHAGLVQEGNKVFHSMLE 342
++ Y G+ E+L+LF V+ ++ T S+L C + L+Q G ++ H +
Sbjct: 193 LIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMG-RLIHGLSF 251
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
+ ++ L + G + EA + E+ + + +W+ +L +C +H T
Sbjct: 252 KTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWNAMLIACAQHAHT 306
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 335/581 (57%), Gaps = 33/581 (5%)
Query: 20 NIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
+++Q +QLH H++ P V+++LIN+Y+K + +FDE PK++ +W++
Sbjct: 40 SLRQGLQLHAHILKFGLQTIP---LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSS 96
Query: 79 LISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----GKLVHALALKFS 133
+IS +AQ+ + F +L P++ S +C +L GK VH LA+K
Sbjct: 97 VISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG 156
Query: 134 LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
V+V ++L++MY+K C + +A +F+ M RNV+SW+ MI +
Sbjct: 157 YYCDVFVGSSLVDMYAK-CGEIGDARHLFDEMPERNVVSWSGMIYGY------------- 202
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
A++ + EAL LF+Q E + + TFS V++ C+ +H L K F+ +
Sbjct: 203 AQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSS 262
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNM 308
+ +ALI Y++CG I + QVFD++ +L WNS+L A A H + LF N+
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNV 322
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
++P+ +F+S+L ACSHAGLV++G + F S++ ++G+ P+ +HYA +VDLLGR G++ E
Sbjct: 323 GMKPNFISFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQE 381
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A +I++MPM P +W LL CR H +T +A A ++ +++ S V +SN Y
Sbjct: 382 AVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAA 441
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
+G + +A +RK ++ V+K GLSW+E N+VH F +G + H + I++KLEEL +
Sbjct: 442 AGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEE 501
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
++ GYV +TS L ++ E K E + +HSE+LA+ F ++ IR+MKN+R+
Sbjct: 502 MEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLIT----FPPGRPIRVMKNLRV 557
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH +K S G+ ++VRD+NRFH F+D CSC DYW
Sbjct: 558 CGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
>gi|302805448|ref|XP_002984475.1| hypothetical protein SELMODRAFT_180944 [Selaginella moellendorffii]
gi|300147863|gb|EFJ14525.1| hypothetical protein SELMODRAFT_180944 [Selaginella moellendorffii]
Length = 592
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 222/610 (36%), Positives = 336/610 (55%), Gaps = 56/610 (9%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Q YAT+ CA ++ ++H +I++ +D F+ N L+ MY G L+DAR +F
Sbjct: 13 QEYATILRKCARSRLLEDGRRVHARIIHS--GHTRDRFLGNLLVQMYRDCGRLEDARAVF 70
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY---FFPNEFSLASVLISCDYL-- 120
D MP RN SW +IS Y G +E L+ +L++ P+ F +S L +C L
Sbjct: 71 DSMPLRNEFSWAIIISAYVGAGKEQEALCLYRALVRSSTEIQPDAFIFSSALAACARLKC 130
Query: 121 --HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNV--ISWNSM 174
G +H +K + V + NAL+ MY+K C D A +VF+ + R+V ISWN+M
Sbjct: 131 LEQGLEIHEQIVKRGIKQDVGLQNALVTMYAK-CGRIDRAKQVFDRITHRDVVVISWNAM 189
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
IA F + ++AL LFR++ EG+ P T+ VL ACA L
Sbjct: 190 IAGF-------------GQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLT---- 232
Query: 235 ASAVHSLIAKYGFED----DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
AS++ +I G ++ D +AN++ + Y +CG L++Q F +MTY D+VSW +I+
Sbjct: 233 ASSLGRIICD-GMDEALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIA 291
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN--HG 345
AYA +G + EAL +F M V+P+ T ++ LSACSH L EG+ +F S++ +G
Sbjct: 292 AYAQNGYSSEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYG 351
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
V H+ C +DLLGR G + +AE LI +MP + +V W+ LL +CR + + A A
Sbjct: 352 VTANESHFLCAIDLLGRAGYLKDAETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVA 411
Query: 406 TKLKQLEPG---DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
L +L+ D +V +SNIY +G +R +++ +K PG S I I+ +
Sbjct: 412 NHLFELDESSIKDPAPYVMLSNIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQT 471
Query: 463 HEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLA 522
+EF S + HP+R+ + +L L +K GYVP+T +A EEE E+ L +HSEKLA
Sbjct: 472 NEFYSLDETHPRRDDAYNELRRLFQTMKEAGYVPDTRIAEM--EEEETEQSLSYHSEKLA 529
Query: 523 LVFAIMN---QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
L F ++N + SLC I+KN+R+C DCHN +K S L ++I VRD+ RFHHF+
Sbjct: 530 LAFGVLNTPPEASLC-------IVKNLRVCSDCHNVIKFLSKHLNRKIAVRDATRFHHFE 582
Query: 580 DRICSCNDYW 589
+ CSC D W
Sbjct: 583 NGFCSCRDCW 592
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 207/593 (34%), Positives = 329/593 (55%), Gaps = 67/593 (11%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFG------------------YLDD 60
G++++ ++ + + N + +F+ N L+N YAK G ++
Sbjct: 150 GDLREGRRIFDKVAN------EKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL 120
AR LFDE+ R+V+SW ++ISGY +G +E+ LF +L +
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL----------------GI 247
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFR 179
+ L ++++ +L+ N L++MYSKS + A +VFE M R+V+SW SMIA +
Sbjct: 248 NTDLATMVSVELTLN------NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYA 301
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L ++ LF +M E+E LF P+ T + +L ACA L +H
Sbjct: 302 REGLSDMSVRLFHEM--EKEDLF-----------PNSITMACILPACASLAALERGQEIH 348
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I + GF D +ANAL+ Y +CG++ L++ +FD + DLVSW ++ Y +HG
Sbjct: 349 GHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGS 408
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ F+ M ++PD +F+S+L ACSH+GL+ EG F+ M N + P+ +HYAC+
Sbjct: 409 EAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACI 468
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLL R G + +A K I+ MP+EPD+ IW LL CR + + +LAE A + +LEP ++
Sbjct: 469 VDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENT 528
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V ++NIY + + + + +R+ + +RK PG SWIEI+ +VH F +G HP
Sbjct: 529 GYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLAN 588
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I L++ ++K G+ P+ AL ++ KE L HSEK+A+ F I+ SL
Sbjct: 589 KIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGIL---SLPPG 645
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++V R+ KN+R+C DCH K S ++ ++I++RDSNRFHHFKD CSC +W
Sbjct: 646 KTV-RVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 32/261 (12%)
Query: 181 CKLEAQAIEL--FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
CK+ IE+ F ++ N A+ L Q + + + T+ VL+ CA L + + +
Sbjct: 66 CKITDYNIEICRFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKSIQDGRRI 123
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
HS+I E D V+ + L+ Y CG + +++FDK+ + WN ++ YA G
Sbjct: 124 HSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNF 183
Query: 299 KEALQLFSNMN-----------------VQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
+E+L LF M D ++ S++S GL ++G +F ML
Sbjct: 184 RESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQML 243
Query: 342 -------ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
V +L C++D+ + G + A ++ M E V W+ ++ +
Sbjct: 244 LLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAGYAR 302
Query: 395 HGETRLAELAATKLKQLEPGD 415
G L++++ ++E D
Sbjct: 303 EG---LSDMSVRLFHEMEKED 320
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 199/498 (39%), Positives = 286/498 (57%), Gaps = 35/498 (7%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ HA L F LD +V +L+NMYS SC D A +VF++ +++ +WNS++ A+
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYS-SCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 180 ACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREG-----MAPDW 216
L A +LF +M +EAL LFR++Q + P+
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T S VL AC L VH+ I KY E D V+ ALI YA+CGS+ +K+VF+
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 277 M-TYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQ 331
+ + D+ ++++++ A++G E QLFS M N+ P+S TFV +L AC H GL+
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F M+E G+ P + HY CMVDL GR G I EAE I MPMEPD +IW LL
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
R G+ + E A +L +L+P +S +V +SN+Y +G + + + IR EM+ + K P
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVP 439
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S++E+E VHEF G + + E I+ L+E++ +L+ GYV +T L D+ E+ KE
Sbjct: 440 GCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKE 499
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L +HSEKLA+ F +M R + +RI+KN+RIC DCH MK+ S L +EIVVRD
Sbjct: 500 IALSYHSEKLAIAFCLMKT----RPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRD 555
Query: 572 SNRFHHFKDRICSCNDYW 589
NRFHHF+D CSC D+W
Sbjct: 556 CNRFHHFRDGSCSCRDFW 573
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 32/319 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+DL N ++N YAK G +DDAR LFDEMP+RNV+SW+ LI+GY G +E LF +
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 100 L------QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYS 149
+ PNEF++++VL +C L GK VHA K+ ++ + + ALI+MY+
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 150 KSCA-DEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K + + A +VF + ++V ++++MI L + +LF++M +
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN-------- 297
Query: 208 QREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ P+ TF +L AC GL+ E S +I ++G ++ Y R G
Sbjct: 298 ----INPNSVTFVGILGACVHRGLINE-GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSG 352
Query: 266 SISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKE---ALQLFSNMNVQPDSATFVSLL 321
I ++ M D++ W S+L + G K AL+ ++ +S +V L
Sbjct: 353 LIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPM-NSGAYVLLS 411
Query: 322 SACSHAGLVQEGNKVFHSM 340
+ + G E + H M
Sbjct: 412 NVYAKTGRWMEVKCIRHEM 430
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 334/598 (55%), Gaps = 34/598 (5%)
Query: 5 TQIYATLFHACALHG-NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
TQ ++ + A G ++ Q+H H+I + + + L LI++ G + AR
Sbjct: 87 TQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLT--KLISLVCTAGSITYARR 144
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH- 121
LF +P + + +L+ ++ G + + + +L P + ++ SV+ +C L
Sbjct: 145 LFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSA 204
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
GK +H+ + + +YV ALI +Y+K S A KVF+ M R +I+WNS+I+
Sbjct: 205 LRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISG 264
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L +E++ LF + G PD T +L +C+ L
Sbjct: 265 YDQNGLP-------------QESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCW 311
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H GF+ + V+ +LI+ Y RCG++S +++VFD M ++V+W +++ Y +HG
Sbjct: 312 LHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGY 371
Query: 298 AKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
++A++LF+ M +P++ TFV++LSAC+H+GL+ +G +VF SM E +G+VP ++H
Sbjct: 372 GRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNV 431
Query: 355 CMVDLLGRVGRILEAEKLIRE-MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
CMVD+ GR G + +A + I++ +P EP +W+ +LG+CR H L A + +EP
Sbjct: 432 CMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEP 491
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+ +V +SNIY L+G ++ ++R M R++K G S IEI + + F+ G K HP
Sbjct: 492 ENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHP 551
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM--NQG 531
Q I++ L+EL+ + GYVP +HD+EEE ++ L +HSEKLAL F ++ NQG
Sbjct: 552 QTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQG 611
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KN+RIC DCH+ +K S + +EI+VRD RFHHFKD CSC DYW
Sbjct: 612 ------ETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 209/558 (37%), Positives = 318/558 (56%), Gaps = 54/558 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
++FV + L++MYAK + A +F+EMP + + TAL
Sbjct: 44 EVFVVSALVDMYAKCCDMLMAEKVFEEMPTLLLENLTAL--------------------- 82
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
+E S +SV +C + GK VH +ALK + VY+ N+L +MY K C +
Sbjct: 83 -----DEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGK-CGLFN 136
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ K+F N R+V++WN MI A+ N E+A F ++R+G P
Sbjct: 137 DVAKLFSNTGARDVVTWNIMIMAY-------------VYNHNYEDACNSFWMMRRKGSIP 183
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D ++S VL +CA L + +H+ I + GF + +A++LI YA+CGS+ + Q+F
Sbjct: 184 DEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIF 243
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
++ ++V W +I+ A HG A ++LF M ++PD TFVS+LSACSH G V+
Sbjct: 244 EETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVE 303
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F+SM++ HG+ P +HYAC+VDLL R G + A++ I MP++PD+ +W LL +
Sbjct: 304 EGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 363
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR H + + A KL LEP + +V + NI +G N+A +R++M+ VRK P
Sbjct: 364 CRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEP 423
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G SWI+I+N + F K H + + I++ LE+L +K GYV ET A+ + EE+KE
Sbjct: 424 GCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAI-NTAEEYKE 482
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
+ L++HSEK+AL F +++ + + IRI KN+R C DCH MK AS++ +EI+VRD
Sbjct: 483 QSLWYHSEKIALAFGLLSLPA----GAPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRD 538
Query: 572 SNRFHHFKDRICSCNDYW 589
NRFHHF + ICSC DYW
Sbjct: 539 INRFHHFTNGICSCGDYW 556
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 173/354 (48%), Gaps = 36/354 (10%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++F ACA GN++ Q+H + +++ N L +MY K G +D LF
Sbjct: 87 FSSVFSACANAGNLEFGKQVHGVALK--LGVWNLVYINNSLSDMYGKCGLFNDVAKLFSN 144
Query: 68 MPKRNVVSWTALISGYAQHGNAEE-CFRLFCSLLQYFFPNEFSLASVLISCDYL----HG 122
R+VV+W +I Y + N E+ C + + P+E S +SVL SC L G
Sbjct: 145 TGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG 204
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
L+H ++ ++ VA++LI MY+K C +A+++FE E RNV+ W ++IA A
Sbjct: 205 TLIHNQIIRSGFVKNLRVASSLITMYAK-CGSLVDAFQIFEETEDRNVVCWTAIIA---A 260
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAV 238
C+ A + LF Q+ REG+ PD+ TF VL AC+ G V E
Sbjct: 261 CQQHGHA----------NWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFY-F 309
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQ 297
+S+I +G ++ +R G + +K+ + M D W ++L A H
Sbjct: 310 NSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSN 369
Query: 298 ---AKE-ALQLFSNMNVQPDS-ATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
KE AL+LF +++PD+ +V L + + G++ E ++V M E+ GV
Sbjct: 370 LIMGKEVALKLF---DLEPDNPGNYVLLCNILTRNGMLNEADEVRRKM-ESIGV 419
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 124/294 (42%), Gaps = 80/294 (27%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
++R G+ P+ TFS VL AC H +HSL+ K+GF + + +AL+ YA+C
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60
Query: 267 ISLSKQVFDKM--------TYHDLVSWNSILKAYA----------LHGQA---------- 298
+ ++++VF++M T D VS++S+ A A +HG A
Sbjct: 61 MLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 120
Query: 299 ---------------KEALQLFSNMNVQ-------------------------------- 311
+ +LFSN +
Sbjct: 121 INNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKG 180
Query: 312 --PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
PD A++ S+L +C++ + +G + H+ + G V L + ++ + + G +++A
Sbjct: 181 SIPDEASYSSVLHSCANLAALYQGT-LIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDA 239
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETR-LAELAATKLKQLEPGDSLGFVQM 422
++ E + + V W+ ++ +C++HG + EL L++ D + FV +
Sbjct: 240 FQIFEETE-DRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSV 292
>gi|356544972|ref|XP_003540920.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Glycine max]
Length = 622
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 211/589 (35%), Positives = 326/589 (55%), Gaps = 38/589 (6%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+Y TL C G +K+ +H HM N+ DL + N ++ MYA+ G L D +H+F+
Sbjct: 66 LYNTLLKRCTQLGKLKEGKLVHFHMFNS--KFKDDLVIQNFVLFMYARCGNLKDTQHVFN 123
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHGKLV 125
E ++++V+WT++ISGYAQ+ A++ LF +L N F L+S L+
Sbjct: 124 EKLQKDMVTWTSMISGYAQNERAKDTLVLFPRILSEGTKLNXFILSS-----------LI 172
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKL 183
HA + ++V+V ++L+NM ++ C E VF+N +N +SWN++I +
Sbjct: 173 HASCWMYGCHSNVFVGSSLVNMXAR-CGYLGEEXLVFDNSWCKNEVSWNALIGGY----- 226
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
AK EEAL L+ ++Q E P T+S +L + + + + +
Sbjct: 227 --------AKKGEGEEALALYLRMQMEAYKPIQFTYSGILSSYLSMGCLEQGKWLLAHLM 278
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
K G + + N L+H YA+ G I ++ FDK+ D+VS NS+L YA HG KEA+Q
Sbjct: 279 KPGQKLVVYVGNTLLHMYAKLGKIRDVEKFFDKLVKVDVVSCNSMLTRYAQHGLGKEAMQ 338
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F M ++P+ T + +LS+CSHA L+ EG F ++ + + P++ HYA ++DLL
Sbjct: 339 QFEEMISFGIEPNDITVLFVLSSCSHARLLDEGKHYF-GLMRKYSIEPKVSHYATIIDLL 397
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
G G + +AE I EMP+EP I LLG + H T++ AA ++ +L P
Sbjct: 398 GXAGLLDQAESFIEEMPIEPIVAIXGALLGDSKMHKNTKMGAYAAQQVFELNPSCRGTHT 457
Query: 421 QMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFK 480
+ N+Y +G + + K MK S V+K P S +EIEN VH F + HPQ+E I K
Sbjct: 458 LLVNMYASAGRWGDVAKVIKIMKDSGVKKEPTCSXVEIENSVHVFVANDAAHPQKEKIHK 517
Query: 481 KLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVI 540
E+L ++K +GYVP+TS L ++++ KE +H+EKLAL A +N RS
Sbjct: 518 MWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNFQYHTEKLALTLAFLNTPP----RSTT 573
Query: 541 RIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
RIMKNIR+ DCH+ + + ++ +EI+VRD+NRFHHF+D CSC DYW
Sbjct: 574 RIMKNIRVSGDCHSSINYVALVVKREIIVRDTNRFHHFRDGFCSCGDYW 622
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D ++ +LK C L + VH + F+DD VI N ++ YARCG++ ++ VF
Sbjct: 63 DLTLYNTLLKRCTQLGKLKEGKLVHFHMFNSKFKDDLVIQNFVLFMYARCGNLKDTQHVF 122
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEG- 333
++ D+V+W S++ YA + +AK+ L LF + + + +LS+ HA G
Sbjct: 123 NEKLQKDMVTWTSMISGYAQNERAKDTLVLFPRI-LSEGTKLNXFILSSLIHASCWMYGC 181
Query: 334 -NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ VF + +V++ R G + E E L+ + + V W+ L+G
Sbjct: 182 HSNVFVG--------------SSLVNMXARCGYLGE-EXLVFDNSWCKNEVSWNALIGGY 226
Query: 393 RKHGE 397
K GE
Sbjct: 227 AKKGE 231
>gi|297834310|ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330877|gb|EFH61296.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/601 (32%), Positives = 324/601 (53%), Gaps = 44/601 (7%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L + + Y L HAC ++ +++ ++NN P+ D + + LI +++ LD A
Sbjct: 121 LSTPEAYTDLLHACISAKSLHHGIKICSLVLNN-PSLRHDPKLLSKLITLFSVCRRLDLA 179
Query: 62 RHLFDEMPKRNVVS---WTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC 117
R +FD++ ++++ W A+ GY+++G+ + ++ +L F P FS++ L +C
Sbjct: 180 RKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKAC 239
Query: 118 ----DYLHGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWN 172
D G+ +H +K V N L+ +Y + D+A KVF+ M RN+++WN
Sbjct: 240 VDLKDLRVGRGIHGQIVKRKEKVDQVVYNVLLKLYMERGSFDDARKVFDGMSERNIVTWN 299
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
S+I+ + +K E LFR++Q E + W T + +L AC+ +
Sbjct: 300 SLIS-------------ILSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAAL 346
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
+H+ I K + D + N+L+ Y +CG + S++VFD M DL +WN+IL Y
Sbjct: 347 ITGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGDVEYSRRVFDGMLTKDLTTWNTILNCY 406
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
A++G +E + LF M V PD TFV+LLS CS GL + G +F M V P
Sbjct: 407 AINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGISLFERMKTEFRVSPA 466
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
L+HYAC+VD+LGR G+I EA K+I MP +P + IW LL SCR HG + E+
Sbjct: 467 LEHYACLVDILGRAGKIEEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIGT---- 522
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
+ + + ++ IR+ MK ++K G SW+++++++ F +GG
Sbjct: 523 ---------MLWLRTYIAEAKMWDNVDKIREMMKQRGIKKEAGCSWVQVKDKIQIFVAGG 573
Query: 470 KRHPQREAIFKKL-EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+ +KK+ EL ++ GY P+TS+ LHD++EE K + HSE+LA ++++
Sbjct: 574 GYEFRNSDEYKKVWTELQEAIEKSGYSPDTSVVLHDVDEETKANWVCGHSERLAATYSLI 633
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ G E +R+ KN+R+C DCH++MK+ S + G+ IV+RD+ RFHHF ICSC DY
Sbjct: 634 HTG----EGVPVRVTKNLRVCADCHSWMKIVSQVTGRVIVLRDTKRFHHFVAGICSCKDY 689
Query: 589 W 589
W
Sbjct: 690 W 690
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 334/598 (55%), Gaps = 34/598 (5%)
Query: 5 TQIYATLFHACALHG-NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
TQ ++ + A G ++ Q+H H+I + + + L LI++ G + AR
Sbjct: 23 TQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTK--LISLVCTAGSITYARR 80
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH- 121
LF +P + + +L+ ++ G + + + +L P + ++ SV+ +C L
Sbjct: 81 LFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSA 140
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAA 177
GK +H+ + + +YV ALI +Y+K S A KVF+ M R +I+WNS+I+
Sbjct: 141 LRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISG 200
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ L +E++ LF + G PD T +L +C+ L
Sbjct: 201 YDQNGLP-------------QESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCW 247
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H GF+ + V+ +LI+ Y RCG++S +++VFD M ++V+W +++ Y +HG
Sbjct: 248 LHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGY 307
Query: 298 AKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
++A++LF+ M +P++ TFV++LSAC+H+GL+ +G +VF SM E +G+VP ++H
Sbjct: 308 GRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNV 367
Query: 355 CMVDLLGRVGRILEAEKLIRE-MPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
CMVD+ GR G + +A + I++ +P EP +W+ +LG+CR H L A + +EP
Sbjct: 368 CMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEP 427
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+ +V +SNIY L+G ++ ++R M R++K G S IEI + + F+ G K HP
Sbjct: 428 ENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHP 487
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM--NQG 531
Q I++ L+EL+ + GYVP +HD+EEE ++ L +HSEKLAL F ++ NQG
Sbjct: 488 QTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQG 547
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KN+RIC DCH+ +K S + +EI+VRD RFHHFKD CSC DYW
Sbjct: 548 ------ETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 334/581 (57%), Gaps = 33/581 (5%)
Query: 20 NIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
+++Q +QLH H++ P V+++LIN+Y+K + +FDE PK++ +W++
Sbjct: 40 SLRQGLQLHAHILKFGLQTIP---LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSS 96
Query: 79 LISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----GKLVHALALKFS 133
+IS +AQ+ + F +L P++ S +C +L GK VH LA+K
Sbjct: 97 VISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG 156
Query: 134 LDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
V+V ++L++MY+K C + +A +F+ M RNV+SW+ MI +
Sbjct: 157 YYCDVFVGSSLVDMYAK-CGEIGDARHLFDEMPERNVVSWSGMIYGY------------- 202
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
A++ + EAL LF+Q E + + TFS V++ C+ +H L K F+ +
Sbjct: 203 AQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSS 262
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNM 308
+ +ALI Y++CG I + QVFD++ +L WNS+L A A H + LF N+
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNV 322
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
++P+ F+S+L ACSHAGLV++G + F S++ ++G+ P+ +HYA +VDLLGR G++ E
Sbjct: 323 GMKPNFIXFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQE 381
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCL 428
A +I++MPM P +W LL CR H +T +A A ++ +++ S V +SN Y
Sbjct: 382 AVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAA 441
Query: 429 SGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
+G + +A +RK ++ V+K GLSW+E N+VH F +G + H + I++KLEEL +
Sbjct: 442 AGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEE 501
Query: 489 LKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
++ GYV +TS L ++ E K E + +HSE+LA+ F ++ IR+MKN+R+
Sbjct: 502 MEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLIT----FPPGRPIRVMKNLRV 557
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH +K S G+ ++VRD+NRFH F+D CSC DYW
Sbjct: 558 CGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/490 (37%), Positives = 295/490 (60%), Gaps = 22/490 (4%)
Query: 105 PNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENM 163
PN+F+ +++L + + +HA A+K + V AL++ Y K DEA KVF+ +
Sbjct: 8 PNDFTYSTILTAQPGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRI 67
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
E +++++W++MI + A++ + E A+ +F Q+ +E + P+ TFS ++
Sbjct: 68 EEKDIVAWSAMICGY-------------AQIGDTEGAVRIFVQMAKEKIKPNEYTFSGII 114
Query: 224 KACAGLVTE-RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
ACA +H+ K F + +++AL+ Y++ G I + +VF + DL
Sbjct: 115 NACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDL 174
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
VSWNSI+ YA HG ++AL++F M N++ D TF+ ++SAC+H GL EG + F
Sbjct: 175 VSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDI 234
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
M+++H + P+++HY+CMVDL GR G +++A ++I EMP + +W LL + H
Sbjct: 235 MVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLE 294
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
+ +LAA KL L+P + +V ++N+Y G++ + +RK M+ +V+K G SWIE++
Sbjct: 295 VGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVK 354
Query: 460 NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSE 519
N+ + F +G HP I+ KLEEL QLKG GY P+TS D++EEHKE L HSE
Sbjct: 355 NKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSE 414
Query: 520 KLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFK 579
+LA+ F ++ + ++I+KN+R+C DCH+ +KL S L G++IVVRDSNRFHHFK
Sbjct: 415 RLAIAFGLIG----TPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFK 470
Query: 580 DRICSCNDYW 589
+CSC DYW
Sbjct: 471 GGLCSCGDYW 480
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 168/331 (50%), Gaps = 32/331 (9%)
Query: 26 QLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYA 84
++H I N+ P V L++ Y K G +D+A +F + ++++V+W+A+I GYA
Sbjct: 27 EMHAQAIKRNYVKSPS---VGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYA 83
Query: 85 QHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC-----DYLHGKLVHALALKFSLDAHV 138
Q G+ E R+F + + PNE++ + ++ +C GK +HA ++K + +
Sbjct: 84 QIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNAL 143
Query: 139 YVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
V++AL+ MYSK E A++VF+ R+++SWNS+I+ +A+
Sbjct: 144 CVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISG-------------YAQHGYG 190
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIAN 255
+AL +F ++QR+ + D TF V+ AC GL E ++ + E +
Sbjct: 191 RKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQ-RYFDIMVKDHHIEPRMEHYS 249
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQAKEALQLFSN--MNVQP 312
++ Y R G + + ++ ++M + + W ++L A +H + E +L ++ +++QP
Sbjct: 250 CMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIH-RNLEVGKLAADKLISLQP 308
Query: 313 -DSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
+ A++V L + + G +E KV M E
Sbjct: 309 QNPASYVLLTNMYASVGNWKERAKVRKLMEE 339
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 207 LQREGMAPDWCTFSIVLKACAGLVT-ERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ REG+ P+ T+S +L A G+ E HA A+ K + + AL+ AY + G
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPFEMHAQAI-----KRNYVKSPSVGTALLDAYVKRG 55
Query: 266 SISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLS 322
++ + +VF ++ D+V+W++++ YA G + A+++F M ++P+ TF +++
Sbjct: 56 NVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIIN 115
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
AC+ E K H+ L + ++ + + G I A ++ + E D
Sbjct: 116 ACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQ-RERDL 174
Query: 383 VIWSVLLGSCRKHGETRLA 401
V W+ ++ +HG R A
Sbjct: 175 VSWNSIISGYAQHGYGRKA 193
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 8 YATLFHACAL-HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ + +ACA ++Q QLH I + N L V++ L+ MY+K G ++ A +F
Sbjct: 110 FSGIINACAAPTAGVEQGKQLHAWSIKSRFNNA--LCVSSALLTMYSKRGDIESAFEVFK 167
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF 96
+R++VSW ++ISGYAQHG + +F
Sbjct: 168 RQRERDLVSWNSIISGYAQHGYGRKALEVF 197
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/472 (41%), Positives = 289/472 (61%), Gaps = 21/472 (4%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G VH ALK L+ +VYV +AL++MY K EA +VFE + +N++SW +++ A+
Sbjct: 202 GSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAY-- 259
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
ELF E+AL LF ++ EG+ P+ T+++ L +CAGL T ++ +A+ +
Sbjct: 260 -----TQNELF------EDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGA 308
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K G + NAL++ Y++ GS+ +++VF M D+VSWNSI+ YA HG+A+E
Sbjct: 309 CTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRARE 368
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A++ F +M P TF+ +LSAC+ GLV EG + M++ GV P +HY CMV
Sbjct: 369 AMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMV 428
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
LL RVGR+ EAE+ I + D V W LL SC+ + L A ++ QL+P D
Sbjct: 429 GLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVG 488
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SN+Y + ++ +R+ M+ VRK PG+SWI++ + VH F S K+HP E
Sbjct: 489 TYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQ 548
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I KKL+ELI ++K +GYVP ++ALHD+E+E KEE L +HSEKLAL F ++ +
Sbjct: 549 ITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRT----PKG 604
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRIMKN+RIC DCH +KL S G+ IVVRD+ RFH +D +CSC+DYW
Sbjct: 605 EAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 656
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 165/372 (44%), Gaps = 62/372 (16%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ N+LI +Y K G L AR +FD MP RN VS L+SGYA G + L +
Sbjct: 49 DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALL--RV 106
Query: 101 QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
F NE+ L+S + + Y G+ H A+K L H YV +A+++MY + CA D
Sbjct: 107 ADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQ-CAHMD 165
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA K ++K E+ A
Sbjct: 166 EAVK--------------------------------YSKKHGEK------------CRAM 181
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
C VL CA S VH+ K E + + +AL+ Y +C + +VF
Sbjct: 182 GSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVF 241
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+ + ++VSW +I+ AY + ++ALQLF +M V+P+ T+ L++C+ ++
Sbjct: 242 EVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLK 301
Query: 332 EGNKVFH-SMLENH-GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
GN + +M H G++P + ++++ + G + +A ++ MP D V W+ ++
Sbjct: 302 NGNALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSII 357
Query: 390 GSCRKHGETRLA 401
HG R A
Sbjct: 358 IGYAHHGRAREA 369
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 152/294 (51%), Gaps = 31/294 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
+++V + L++MY K + +A +F+ +P++N+VSWTA+++ Y Q+ E+ +LF +
Sbjct: 217 NVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDME 276
Query: 100 LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
++ PNEF+ A L SC L +G + A +K + V NAL+NMYSKS + +
Sbjct: 277 MEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVE 336
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+A +VF +M R+V+SWNS+I + +A+E F M EE P
Sbjct: 337 DARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEE-------------VP 383
Query: 215 DWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ TF VL ACA GLV E ++ ++ + G + ++ R G + +++
Sbjct: 384 SYVTFIGVLSACAQLGLVDEGF-YYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAER 442
Query: 273 VFDKMTY-HDLVSWNSIL---KAYALHGQA-KEALQLFSNMNVQP-DSATFVSL 320
+ D+V+W S+L + Y +G + A Q+F ++P D T+V L
Sbjct: 443 FIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIF---QLKPKDVGTYVLL 493
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
AVH+ + + D V N LI Y +CG + L++QVFD M + VS N ++ YA
Sbjct: 35 GKAVHARVVR-AARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93
Query: 295 HGQAKEALQLFSNMNVQPDSATFVSLLSACSH 326
G+ ++AL L + + S ++A +H
Sbjct: 94 SGRHRDALALLRVADFGLNEYVLSSAVAATAH 125
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 205/607 (33%), Positives = 327/607 (53%), Gaps = 75/607 (12%)
Query: 54 KFGYLDDARHLFDEM----PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEF 108
+ G +DDA L M P+ + +W A++SG A+HG E + +L Q +P+
Sbjct: 249 RLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDAT 308
Query: 109 SLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFEN 162
+++S+L S HG VH L+ L Y AL++MY+K C D A +VF+
Sbjct: 309 TVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAK-CGRLDCARRVFDT 367
Query: 163 MEFRNVISWNSMIAA------FRAC-----------------------------KLEAQA 187
+E RN+ +WNS++A F A L +QA
Sbjct: 368 LEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQA 427
Query: 188 IELFAKMKNE----------------------EEALFLFRQLQREGMAPDWCTFSIVLKA 225
+ L ++K E++ F+++Q++G+ P T ++L+A
Sbjct: 428 MLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRA 487
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
CAGL + +H + ++ D V+ ALI Y++ GS++ +K++F ++ +LV
Sbjct: 488 CAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCC 547
Query: 286 NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
N++L A+HGQ+ EA+ LF ++ ++PDS TF +LL+AC GL+ EG + F +M
Sbjct: 548 NAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMET 607
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
+GVVP ++YACMVDLL R G + EA LI P++P + +W LL C HG LAE
Sbjct: 608 KYGVVPTAENYACMVDLLARSGYLDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLAE 667
Query: 403 LAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
+AA L +LEP +S ++ + ++Y +++A ++ MK V PG SWI+IE +
Sbjct: 668 VAARNLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQGI 727
Query: 463 HEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLA 522
H F G HP+ I ++L L+ Q+K GYVP+TS ++++ EE KE+ L H+EKLA
Sbjct: 728 HVFEVDGSPHPETAEICEELMSLVRQIKMTGYVPDTSCVVYNVPEEEKEKLLLCHTEKLA 787
Query: 523 LVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRI 582
+ + +++ + R +R++KN R+C DCH K S L G++I++RD+ RFHHF D
Sbjct: 788 ITYGLIHSDA---SRMPVRVIKNTRMCSDCHEVAKHISALCGRQIILRDAVRFHHFVDGN 844
Query: 583 CSCNDYW 589
CSCNDYW
Sbjct: 845 CSCNDYW 851
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 135/322 (41%), Gaps = 58/322 (18%)
Query: 166 RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
++ + WN +A + A+ +EA+ FR++Q G+A D + VL A
Sbjct: 132 KDAVLWNKQVA-------------MLAEAGEWDEAIGAFREMQARGVAADGYALARVLHA 178
Query: 226 CAGLVTERHASAVHSLIAKYGFED---------------------------------DTV 252
C R AVH+ K G D +V
Sbjct: 179 CGRAAARREGKAVHAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSV 238
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYH----DLVSWNSILKAYALHGQAKEALQLFSNM 308
+A++ R G + + ++ +M L +WN++L A HG+ +EAL + M
Sbjct: 239 AWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRM 298
Query: 309 ---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
+ PD+ T SLL + ++AG+V+ G +V H HG+VP +VD+ + GR
Sbjct: 299 LEQGLWPDATTVSSLLKSVANAGMVRHGMEV-HCFFLRHGLVPDAYTGTALVDMYAKCGR 357
Query: 366 ILEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLEPGDSLGFVQMS 423
+ A ++ + + W+ L+ G E L + K +L+P + + +
Sbjct: 358 LDCARRVFDTLEHR-NLATWNSLVAGHAYAGQFEAALELVERMKRNRLDP-NVTTWNGLI 415
Query: 424 NIYCLSGSFNKARLIRKEMKGS 445
Y L+G ++A L+ +++K +
Sbjct: 416 TGYSLNGLSSQAMLLLRQIKAA 437
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 275/495 (55%), Gaps = 27/495 (5%)
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKV 159
P + AS+L SC GK +HA +A L+N+Y A +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F+ + N+ WN +I + A E A+ L+ Q+ G+ PD TF
Sbjct: 133 FDRIPKHNIFLWNVLIRGY-------------AWNGPYEAAVQLYYQMFDYGLVPDNFTF 179
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
VLKACA L H +H + + G+E D + ALI YA+CG + +++VFDK+
Sbjct: 180 PFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILV 239
Query: 280 HD---LVSWNSILKAYALHGQAKEALQLFSNMN--VQPDSATFVSLLSACSHAGLVQEGN 334
D +VSWN+++ YA+HG A EAL LF MN +PD TFV +LSACSH GL++EG
Sbjct: 240 RDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGW 299
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
F +M+ ++ + P + HY CMVDLLG GR+ EA LI +M + PDS +W LL SC+
Sbjct: 300 MFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKI 359
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
H L E+A +L +LEP D+ +V +SNIY +G + +RK M R++K S
Sbjct: 360 HANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACS 419
Query: 455 WIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQL 514
WIE++N+VH F SG HP + I+ +LE + G +K GY P T HD+E++ K +
Sbjct: 420 WIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMV 479
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSE+LA+ F +++ R + I KN+RIC DCH +K S + +EI VRD NR
Sbjct: 480 CSHSERLAIAFGLISTPPGTR----LLITKNLRICEDCHVAIKFISKITEREITVRDVNR 535
Query: 575 FHHFKDRICSCNDYW 589
+HHFKD +CSC DYW
Sbjct: 536 YHHFKDGVCSCGDYW 550
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 146/346 (42%), Gaps = 59/346 (17%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
YA+L +C IK QLH + D + L+N+Y L AR LFD
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVC--LAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL----HG 122
+PK N+ W LI GYA +G E +L+ + Y P+ F+ VL +C L HG
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRN---VISWNSMIAAF 178
+ +H ++ + V+V ALI+MY+K C A +VF+ + R+ V+SWN+MI
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITG- 254
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
+A + EAL LF ++ R PD TF VL AC+ GL+
Sbjct: 255 ------------YAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLL------ 295
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
E+ + +I Y D H + ++ G
Sbjct: 296 -----------EEGWMFFETMIRDYK-----------IDPTVQH----YTCMVDLLGHSG 329
Query: 297 QAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
+ EA L M V PDS + +LL++C V+ G ++E
Sbjct: 330 RLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIE 375
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 109/215 (50%), Gaps = 8/215 (3%)
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P + ++ +L++C + +H+ + GF DTVIA L++ Y C S+S ++
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+FD++ H++ WN +++ YA +G + A+QL+ M + PD+ TF +L AC+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI---W 385
++ G ++ H + G + A ++D+ + G + A ++ ++ + D+V+ W
Sbjct: 191 AIEHGREI-HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLVVSW 248
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFV 420
+ ++ HG A ++ ++ D + FV
Sbjct: 249 NAMITGYAMHGHATEALDLFEEMNRVAKPDHITFV 283
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 315/564 (55%), Gaps = 38/564 (6%)
Query: 40 QDLFVTNHLINMYA-----KFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
QD ++ L+ YA ++ + + +FD + K NV W +I ++ +
Sbjct: 85 QDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAIL 144
Query: 95 LFCSLL-QYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYS 149
L+ ++ +F PN+++ +VL +C G VHA +K L ++ ++ I MY+
Sbjct: 145 LYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYA 204
Query: 150 KSCADEAWKVFENMEFRNVISWNSMIAAFRACK---LEAQAIELFAKMKNEEEALFLFRQ 206
S+ ++ A R E A+ + + EAL +F Q
Sbjct: 205 --------------------SFGRLVEARRILDDKGGEVDAVCMPDRKGCFMEALEIFHQ 244
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
+Q+E + P VL ACA L +H+ + + D V+ +L+ YA+CG
Sbjct: 245 MQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGR 304
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSH 326
I L+ +VF+KM+ ++ SWN+++ A+HG+A++A+ LFS M++ P+ TFV +L+AC+H
Sbjct: 305 IDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNACAH 364
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
GLVQ+G +F+SM + +GV PQ++HY C+VDLLGR G + EAEK++ +P EP +W
Sbjct: 365 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 424
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LLG+CRKHG L E L +LEP +S + +SNIY +G + + +RK MK
Sbjct: 425 ALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERG 484
Query: 447 VRKYPGLSWIEI-ENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
++ PG S I++ VH+F G HPQ + I++ L+++ +L+ GY P+ S L DI
Sbjct: 485 IKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDI 544
Query: 506 EEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGK 565
+EE KE ++ HSEKLA+ F ++N + IRI+KN+R+C DCH+ KL S + +
Sbjct: 545 DEEEKETAVWQHSEKLAIGFGLINTSP----GTTIRIVKNLRVCEDCHSATKLISQVYNR 600
Query: 566 EIVVRDSNRFHHFKDRICSCNDYW 589
EI+VRD R+HHF++ CSC D+W
Sbjct: 601 EIIVRDRIRYHHFRNGACSCKDFW 624
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 172/417 (41%), Gaps = 90/417 (21%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F + Y + AC+ G + + +Q+H H++ + D + + I MYA FG L +
Sbjct: 154 FRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKH--GLGGDGHILSSAIRMYASFGRLVE 211
Query: 61 ARHLFDE---------MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSL 110
AR + D+ MP R G E +F + + P +F L
Sbjct: 212 ARRILDDKGGEVDAVCMPDRK--------------GCFMEALEIFHQMQKEKIRPRKFVL 257
Query: 111 ASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENME 164
SVL +C L G+ +H A + S+ + +L++MY+K C D AW+VFE M
Sbjct: 258 PSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAK-CGRIDLAWEVFEKMS 316
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
+ V SWN+MI AI+LF+KM + P+ TF VL
Sbjct: 317 NKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD----------------INPNEITFVGVLN 360
Query: 225 ACA-GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
ACA G + ++ + +S+ +YG E ++ R G ++
Sbjct: 361 ACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT--------------- 405
Query: 284 SWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
EA ++ S++ +P A + +LL AC G V+ G +V +LE
Sbjct: 406 ----------------EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLE- 448
Query: 344 HGVVPQ-LDHYACMVDLLGRVGR---ILEAEKLIRE--MPMEPDSVIWSVLLGSCRK 394
+ PQ Y + ++ + GR + E KL++E + P + I + G K
Sbjct: 449 --LEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHK 503
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 150/339 (44%), Gaps = 45/339 (13%)
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCADE------AWKVFENMEFRNVISWNSM 174
H K HAL L+ Y+A +L+ Y+ + + +VF+ + NV WN M
Sbjct: 70 HLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCM 129
Query: 175 IAAFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKAC--AGLV 230
I + C ++N E +A+ L+ ++ P+ T+ VLKAC AG+V
Sbjct: 130 I---KVC------------IENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVV 174
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF-DKMTYHDLVSWNSIL 289
E VH+ + K+G D I ++ I YA G + ++++ DK D V
Sbjct: 175 AE--GVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPD-- 230
Query: 290 KAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
G EAL++F M ++P S+LSAC++ G + +G + H+ + + +
Sbjct: 231 ----RKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYAKRNSI 285
Query: 347 VPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
QLD +VD+ + GRI A ++ +M + S W+ ++G HG A
Sbjct: 286 --QLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSS-WNAMIGGLAMHGRAEDAIDL 342
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+K+ + P + + FV + N G K I M+
Sbjct: 343 FSKM-DINP-NEITFVGVLNACAHGGLVQKGLTIFNSMR 379
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 205/579 (35%), Positives = 315/579 (54%), Gaps = 34/579 (5%)
Query: 41 DLFVTNHLIN--MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+F + LI + + L A + ++ N+ + ALI G + N E F +
Sbjct: 48 DVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIK 107
Query: 99 LLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMY-SKSC 152
L++ P+ + ++ +C L G H A+K + YV N+L++MY S
Sbjct: 108 ALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGD 167
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--------------- 197
+ A VF+ M +V+SW MIA + C A ELF +M
Sbjct: 168 INAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARN 227
Query: 198 ---EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
E+A+ F LQ EG+ + V+ +CA L H + + + ++
Sbjct: 228 NCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILG 287
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ--- 311
A++ YARCG++ + VF+++ D++ W +++ A+HG A++AL FS M +
Sbjct: 288 TAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFV 347
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P TF ++L+ACSHAG+V+ G ++F SM +HGV P+L+HY CMVDLLGR G++ +AEK
Sbjct: 348 PRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEK 407
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
+ +MP++P++ IW LLG+CR H + E L +++P S +V +SNIY +
Sbjct: 408 FVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANK 467
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELI-GQLK 490
+ ++R+ MK VRK PG S IEI+ +VHEF G K HP+ E I + E++I ++K
Sbjct: 468 WKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIK 527
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GYV T+ + DI+EE KE L+ HSEKLA+ + IM R + IRI+KN+R+C
Sbjct: 528 LAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMK----IRAPTPIRIVKNLRVCE 583
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH KL S + E++VRD NRFHHFK+ CSC DYW
Sbjct: 584 DCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 318/578 (55%), Gaps = 33/578 (5%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSWTALISGY 83
QLH H++ F + ++ A FG ++ AR +F ++P N+ SW +LI GY
Sbjct: 6 QLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIKGY 65
Query: 84 AQ-HGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDA 136
+Q H ++E LF L + Y PN F+LA VL +C + G VH+ LK +
Sbjct: 66 SQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFGS 125
Query: 137 HVYVANALINMYSKSCADEAW--KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM 194
++V +L+N Y K C + + KVFE M RN+++W +MI+ A++
Sbjct: 126 SLFVQTSLVNFYGK-CEEIGFARKVFEEMPVRNLVAWTAMISGH-------------ARV 171
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
+EA+ LFR++Q+ G+ PD T V+ ACA +H+ I KY D ++
Sbjct: 172 GAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELS 231
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
AL+ YA+CG I +KQVF M D +W+S++ +A HG A++A+ F M V
Sbjct: 232 TALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVT 291
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
PD TF+++LSAC+H GLV G + + MLE G+ P ++HY C VDLL R G + EA +
Sbjct: 292 PDHVTFLAVLSACAHGGLVSRGRRFWSLMLE-FGIEPSVEHYGCKVDLLCRSGLVEEAYR 350
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
+ M + P++ W LL C+K L E+ A L +LEP ++ ++ +SN+Y
Sbjct: 351 ITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQ 410
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG 491
+ K +RK MK ++ PG S IE++ VHEF G + HP+ + + + +EE+ +++
Sbjct: 411 WEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRD 470
Query: 492 MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GY P S LH + +E KE L HSE+ A+ + ++ R VIR++KN+R+CVD
Sbjct: 471 SGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKT----RAPIVIRVVKNLRVCVD 526
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH +K+ S L +EI+VRD RFH F CSC D+W
Sbjct: 527 CHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 187/411 (45%), Gaps = 69/411 (16%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A + ACA+ + +Q+H H++ + LFV L+N Y K + AR +F+EM
Sbjct: 96 AFVLKACAIVTAFGEGLQVHSHVLKD--GFGSSLFVQTSLVNFYGKCEEIGFARKVFEEM 153
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GK 123
P RN+V+WTA+ISG+A+ G +E LF + + P+ +L SV+ +C G
Sbjct: 154 PVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGY 213
Query: 124 LVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
+HA K+ + + ++ AL++MY+K C + A +VF +M ++ +W+SMI F
Sbjct: 214 WLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHG 273
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVHS 240
L AI+ F +M E + PD TF VL ACA GLV+ S
Sbjct: 274 LAQDAIDAFQQMLETE-------------VTPDHVTFLAVLSACAHGGLVS--RGRRFWS 318
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L+ ++G E + R G + +E
Sbjct: 319 LMLEFGIEPSVEHYGCKVDLLCRSGLV-------------------------------EE 347
Query: 301 ALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSML-------ENHGVVPQLDHY 353
A ++ + M + P++AT+ SLL C L+ G V +L EN+ ++ L
Sbjct: 348 AYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSS 407
Query: 354 ACMVDLLGRVGRILEAEKLIREMP----MEPDSVIWSVLLGSCRKHGETRL 400
+ + + ++++ EK I+ +P +E D V+ ++G + H E ++
Sbjct: 408 LSQWEKMSELRKVMK-EKCIKPVPGCSSIEVDGVVHEFVMGD-QSHPEVKM 456
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 215/588 (36%), Positives = 320/588 (54%), Gaps = 52/588 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ +I+ AK G LDDAR L P RNVV+WT LISGY++ G A E F S+
Sbjct: 169 KDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSM 228
Query: 100 L-QYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVAN-----------ALINM 147
L P+E ++ +L +C L L F H+ V + ALI+M
Sbjct: 229 LSDGIAPDEVTVIGMLSACGQLKD-------LNFGCSLHMLVGDKRMLMSDKLVVALIDM 281
Query: 148 YSKSCAD--EAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAI--ELFAKMKNEE---- 198
Y+K C D A +VF+ + R WN+MI + CK+ I LF +M++ +
Sbjct: 282 YAK-CGDTGRAREVFDALGRGRGPQPWNAMIDGY--CKVGHVDIARSLFDQMEDHDVITF 338
Query: 199 --------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
EAL LF +++R G+ D T +L A A L A+H+ I +
Sbjct: 339 NSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQ 398
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
E D + AL+ Y +CG + + F +M+ D+ +W++++ A +G K AL+
Sbjct: 399 RLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEH 458
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M +S T++++L+ACSH+ L+ EG F M H + PQ++HY CM+DLLG
Sbjct: 459 FFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLG 518
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G + EA L++ MPM+P++VIW+ +L +CR H LA+ AA L +LEP + +VQ
Sbjct: 519 RSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQ 578
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
M NIY S + A IR+ M+ V+K G S I + +VH+F G + HPQ I
Sbjct: 579 MYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVM 638
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
+EE+ +LK GY P TS D++EE KE+ L HSEKLA+ F +++ +
Sbjct: 639 MEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLA----PNLPVH 694
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I+KN+R+C DCH+ +KL S L +EI+VRD +RFHHF+ +CSCND+W
Sbjct: 695 IIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 154/376 (40%), Gaps = 77/376 (20%)
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG------L 229
A RAC F + + L+R++ + PD TF + K CA L
Sbjct: 72 TALRAC---------FRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLL 122
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
HA+ +L+ +IA+ +IH YA G +++ FD+ + D+V+W +++
Sbjct: 123 GRMLHAACFRTLLPSA----VPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVI 178
Query: 290 KAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP- 348
A G +A +L + V+ + T+ L+S S AG E F+SML + G+ P
Sbjct: 179 SGLAKMGLLDDARRLLARAPVR-NVVTWTGLISGYSRAGRAAEAVDCFNSMLSD-GIAPD 236
Query: 349 ------------QLD--HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
QL ++ C + +L R+L ++KL+ V + C
Sbjct: 237 EVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLV---------VALIDMYAKCGD 287
Query: 395 HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLS 454
G R A + + +P ++ M + YC G + AR + +M+ V
Sbjct: 288 TGRAREVFDALGRGRGPQPWNA-----MIDGYCKVGHVDIARSLFDQMEDHDV------- 335
Query: 455 WIEIENRVHEFASGGKRHPQREA--IFKKLEE---------LIGQLKG---MGYVPETSL 500
I + + + GG+ REA +F K+ ++G L +G +P+
Sbjct: 336 -ITFNSLITGYIHGGR---LREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGR- 390
Query: 501 ALHD-IEEEHKEEQLY 515
ALH IE+ E +Y
Sbjct: 391 ALHACIEQRLVERDVY 406
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 214/608 (35%), Positives = 329/608 (54%), Gaps = 36/608 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+LF+ C ++ Q+H +I + N P L L + +L A+ +F +
Sbjct: 72 SLFNPCK---TLRHLKQVHAQIITHH-NSPFQLSALASLSALSPFPTFLAYAKTIFHHLQ 127
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD----YLHGKL 124
+ +LI + E L+ ++LQ P+ + V+ +C+ G L
Sbjct: 128 NPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLL 187
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENM-EFRNVISWNSMIAAFRACKL 183
VH +K + Y+ ++LI++Y+ A K N+ R+V+SWN+MI +
Sbjct: 188 VHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVE 247
Query: 184 EAQAIELFAKM------------------KNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
A +F +M EAL LF Q++ G+ P T +L A
Sbjct: 248 MGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSA 307
Query: 226 CAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSW 285
CA L +H+ I E ++++ AL+ YA+CG ISL+ QVF+ M D+++W
Sbjct: 308 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 367
Query: 286 NSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
N+I+ A+HG KEA QLF M V+P+ TFV++LSACSHAG+V EG K+ M
Sbjct: 368 NTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSS 427
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAE 402
++G+ P+++HY C++DLL R G + EA +LI MPMEP+ LLG CR HG L E
Sbjct: 428 SYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGE 487
Query: 403 LAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRV 462
+ +L L+P S ++ +SNIY + ++ AR +R MK + + K PG+S IE++ V
Sbjct: 488 MVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMV 547
Query: 463 HEFASGGKRHPQREAIFKKLEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
H F +G HP+ I++KL E+ +LK +GY +T L D+EEE KE L HSEKL
Sbjct: 548 HRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKL 607
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
A+ + +++ S + IRI+KN+R+C DCH+ +KL S + G+EI+VRD NRFHHF+D
Sbjct: 608 AIAYGLLHLDS----KEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDG 663
Query: 582 ICSCNDYW 589
CSC D+W
Sbjct: 664 ECSCLDFW 671
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/572 (35%), Positives = 316/572 (55%), Gaps = 36/572 (6%)
Query: 48 LINMYAKFGYLDDARHLFDEMPKR-NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP- 105
++ Y K GY D L + M +V++ A+ISGY G +E + ++
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKV 159
+EF+ SV+ +C GK VHA L+ D + N+L+++Y K C DEA +
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYK-CGKFDEARAI 342
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------------EEAL 201
FE M ++++SWN++++ + + +A +F +MK + EE L
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 202 FLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAY 261
LF ++REG P FS +K+CA L + H+ + K GF+ NALI Y
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
A+CG + ++QVF M D VSWN+++ A HG EA+ ++ M ++PD T +
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
++L+ACSHAGLV +G K F SM + + P DHYA ++DLL R G+ +AE +I +P
Sbjct: 523 TVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPF 582
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
+P + IW LL CR HG L +AA KL L P ++ +SN++ +G + + +
Sbjct: 583 KPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARV 642
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
RK M+ V+K SWIE+E +VH F HP+ EA++ L++L +++ +GYVP+T
Sbjct: 643 RKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDT 702
Query: 499 SLALHDIEEE-HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
S LHD+E + HKE+ L HSEK+A+ F +M + IRI KN+R C DCHNF +
Sbjct: 703 SFVLHDVESDGHKEDMLTTHSEKIAVAFGLMK----LPPGTTIRIFKNLRTCGDCHNFFR 758
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++ ++I++RD RFHHF++ CSC ++W
Sbjct: 759 FLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 200/473 (42%), Gaps = 98/473 (20%)
Query: 14 ACALHGNIKQ-AMQLHEHMINNFPN-------------------EPQDLFVTNHLINMYA 53
A A+HGNI Q H++N + EP + T +++ Y
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT-MVSGYC 91
Query: 54 KFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSL 110
G + AR +F++ P R+ V + A+I+G++ + + LFC + + F P+ F+
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 111 ASVL-----ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD------EAWKV 159
ASVL ++ D HA ALK V+NAL+++YSK CA A KV
Sbjct: 152 ASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK-CASSPSLLHSARKV 210
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE-------------------EEA 200
F+ + ++ SW +M+ + EL M + +EA
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK---YGFEDDTVIANAL 257
L + R++ G+ D T+ V++ACA + VH+ + + + F D N+L
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSL 326
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY------------------------- 292
+ Y +CG ++ +F+KM DLVSWN++L Y
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 293 ------ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN 343
A +G +E L+LFS M +P F + +C+ G G + +H+ L
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-YHAQLLK 445
Query: 344 HGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G L ++ + + G + EA ++ R MP DSV W+ L+ + +HG
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHG 497
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 149/330 (45%), Gaps = 57/330 (17%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ ACA G ++ Q+H +++ E N L+++Y K G D+AR +F++
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRR---EDFSFHFDNSLVSLYYKCGKFDEARAIFEK 345
Query: 68 MPKRNVVSWTALISGY-------------------------------AQHGNAEECFRLF 96
MP +++VSW AL+SGY A++G EE +LF
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 97 -CSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK- 150
C + F P +++ + + SC Y +G+ HA LK D+ + NALI MY+K
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKC 465
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+EA +VF M + +SWN++IAA A+A++++ +M ++
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM-------------LKK 512
Query: 211 GMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G+ PD T VL AC AGLV ++ S+ Y LI R G S
Sbjct: 513 GIRPDRITLLTVLTACSHAGLV-DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 269 LSKQVFDKMTYHDLVS-WNSILKAYALHGQ 297
++ V + + + W ++L +HG
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 149/349 (42%), Gaps = 64/349 (18%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF--- 178
+ VH + F ++ N LI++Y KS + A ++F+ + + I+ +M++ +
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCAS 93
Query: 179 -----------------RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
R + I F+ + A+ LF +++ EG PD TF+
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 222 VLKACAGLV-TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS----ISLSKQVFDK 276
VL A + E+ H+ K G T ++NAL+ Y++C S + +++VFD+
Sbjct: 154 VLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 277 MTYHD--------------------------------LVSWNSILKAYALHGQAKEALQL 304
+ D LV++N+++ Y G +EAL++
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
M ++ D T+ S++ AC+ AGL+Q G +V +L D+ +V L
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLYY 331
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ 410
+ G+ EA + +MP + D V W+ LL G A+L ++K+
Sbjct: 332 KCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 309/560 (55%), Gaps = 30/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D V N L++MY K Y++ + H+FD M ++ +SWT +I+ YAQ E +F
Sbjct: 400 DTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQ 459
Query: 101 QYFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ + + S+L +C L K +H A++ L + V N +I++Y + C +
Sbjct: 460 KEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGE-CGEV 517
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+ K+FE +E +++++W SMI +A EAL LF ++Q +
Sbjct: 518 YHSLKMFETVEQKDIVTWTSMI-------------NCYANSGLLNEALVLFAEMQSTDVQ 564
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD +L A GL + VH + + F + I ++L+ Y+ CGS+S + +V
Sbjct: 565 PDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKV 624
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F+ + D+V W +++ A +HG K+A+ LF M V PD +F++LL ACSH+ LV
Sbjct: 625 FNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLV 684
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
EG M+ + + P +HYAC+VDLLGR G+ EA + I+ MP++P SV+W LLG
Sbjct: 685 NEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLG 744
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR H LA +AA +L +LEP + +V +SN++ G +N A+ +R + +RK
Sbjct: 745 ACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKD 804
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL-KGMGYVPETSLALHDIEEEH 509
P SWIEI N VH F + H E I KL E+ +L K GY +T LHD+ EE
Sbjct: 805 PACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEE 864
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K + L+ HSE+LA+ F ++N R +RI KN+R+C DCH F KL S L ++IVV
Sbjct: 865 KVDVLHRHSERLAISFGLINT----RPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVV 920
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHF CSC D+W
Sbjct: 921 RDANRFHHFSGGSCSCGDFW 940
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 168/342 (49%), Gaps = 27/342 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y + A + Q +Q+H H + E D F+ L+ MY K G + DAR LFD
Sbjct: 61 YGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDG 120
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF----CSLLQYFFPNEFSLASVL----ISCDY 119
M R V SW ALI Y G+A E ++ S P+ +LASVL + D
Sbjct: 121 MSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDG 180
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENM-EFRNVISWNSMIAA 177
G VH LA+K LD +VANALI MY+K D A +VFE M + R+V SWNSMI+
Sbjct: 181 RCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISG 240
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ QA++ LFR +QR ++ + T VL+ C L
Sbjct: 241 CLQNGMFLQALD-------------LFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRE 287
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H+ + K G E + + NAL+ Y +CG + + +VF ++ D +SWNS+L Y +G
Sbjct: 288 LHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGL 346
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
EA++ S M QPD A VSL SA H G + G +V
Sbjct: 347 YAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEV 388
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 204/454 (44%), Gaps = 38/454 (8%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
A++ A + G+ + ++H + + + + FV N LI MYAK G LD A +F+ M
Sbjct: 168 ASVLKASGVEGDGRCGCEVHGLAVKHGLD--RSTFVANALIAMYAKCGILDSAMRVFELM 225
Query: 69 -PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----G 122
R+V SW ++ISG Q+G + LF + + N ++ VL C L G
Sbjct: 226 HDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLG 285
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA LK + ++ NAL+ MY+K C D A +VF ++ ++ ISWNSM++ +
Sbjct: 286 RELHAALLKSGSEVNIQ-CNALLVMYTK-CGRVDSALRVFREIDEKDYISWNSMLSCYVQ 343
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
L A+AIE ++M R G PD + A L + VH+
Sbjct: 344 NGLYAEAIEFISEM-------------LRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHA 390
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K + DT + N L+ Y +C I S VFD+M D +SW +I+ YA + E
Sbjct: 391 YAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIE 450
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL++F ++ D S+L ACS + K H +G++ L ++
Sbjct: 451 ALEIFREAQKEGIKVDPMMIGSILEACSGLETILLA-KQLHCYAIRNGLL-DLVVKNRII 508
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG--ETRLAELAATKLKQLEPGD 415
D+ G G + + K+ E + D V W+ ++ G L A + ++P D
Sbjct: 509 DIYGECGEVYHSLKMF-ETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQP-D 566
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
S+ V + S K KE+ G +R+
Sbjct: 567 SVALVSILGAIGGLSSLAKG----KEVHGFLIRR 596
>gi|302776458|ref|XP_002971391.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
gi|300160523|gb|EFJ27140.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
Length = 598
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 209/601 (34%), Positives = 333/601 (55%), Gaps = 37/601 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLD 59
F +T+ YA L CA N+ ++HEH+ + NE F+ N L+ MY K +D
Sbjct: 23 FCSNTEAYAALLRRCANERNLVDGKRVHEHLRRYGYENET---FLGNLLVQMYGKCSSID 79
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-----NEFSLASVL 114
DA FD + K+++ SW +I+ +A++G C + + P N + +VL
Sbjct: 80 DAALAFDSIRKKDLFSWNIMIAAFAENG----CLDRAVGVFELMEPARIKRNRGTFVAVL 135
Query: 115 IS-CDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWN 172
+ D GK +H L+ + VA AL++MY D+A +VFE + +++ WN
Sbjct: 136 AAGLDLEQGKKIHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVPKLDLVCWN 195
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+MI A+ + EAL +F +L+ EG+ + T+ L ACA L +
Sbjct: 196 AMITAY-------------VQNDRGREALEIFHRLEMEGVKCNEVTYLAALDACACLAVQ 242
Query: 233 RHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
++H +++ G + +AN+LI+ Y + G++ ++++F+ M D+ SWN +L
Sbjct: 243 SEGRSLHKRVSEAGLLLTSFKVANSLINMYGKSGNLEAAEEIFESMPSRDISSWNVLLTV 302
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
Y +G A+ F+ +PDS TF+++L ACSHAGL+ G ++ S+ E+ G+ P
Sbjct: 303 YGHNGLGDLAVDRFTESCLEGFEPDSITFLAVLQACSHAGLLDTGVELLVSIQEDWGIDP 362
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
HY C+VDLLGR G ++ AE LI MP EP+ W LLG CR + + E A +L
Sbjct: 363 TQYHYLCVVDLLGRSGELVRAEALINSMPFEPEEGAWRSLLGGCRVNSDVGRGERATQRL 422
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
+ DS +V M+NIY +F+ A +R M V+K PGLSWIE+ R+H FA+
Sbjct: 423 LVMSE-DSSPYVLMANIYASIRNFDLAERLRSVMADRNVKKQPGLSWIEVRGRIHTFAAN 481
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
K H ++E I+ L+ L +L+ GY P+T +AL+D+EEE K L HHSEKLA++F +M
Sbjct: 482 DKLHARKEEIYAGLDRLFVELQREGYRPDTRVALYDVEEEKKVRMLLHHSEKLAIMFGLM 541
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ + S + ++KN+R+C DCH K+ + + ++IV+RD++RFHHF++ CSC DY
Sbjct: 542 STP----DGSPLFVLKNLRVCADCHAATKIIAKITKRKIVMRDASRFHHFENGKCSCCDY 597
Query: 589 W 589
W
Sbjct: 598 W 598
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 8/188 (4%)
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
+ L +E + ++ +L+ CA VH + +YG+E++T + N L+ Y +C
Sbjct: 16 KDLGQERFCSNTEAYAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKC 75
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
SI + FD + DL SWN ++ A+A +G A+ +F M ++ + TFV++L
Sbjct: 76 SSIDDAALAFDSIRKKDLFSWNIMIAAFAENGCLDRAVGVFELMEPARIKRNRGTFVAVL 135
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
+ AGL E K H + + G+ ++ + G G +A ++ ++P + D
Sbjct: 136 A----AGLDLEQGKKIHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVP-KLD 190
Query: 382 SVIWSVLL 389
V W+ ++
Sbjct: 191 LVCWNAMI 198
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 200/544 (36%), Positives = 301/544 (55%), Gaps = 57/544 (10%)
Query: 76 WTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----GKLVHALAL 130
W +I+ Y + ++ L + F + F SVL +C + GK +H L
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186
Query: 131 KFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW----NSMIAAFRACKLEA 185
K LD V+V NAL+ MY + +C + A VF+ M R+V+SW +++ + C
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246
Query: 186 QAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIVLKACA 227
A +LF + + EE LF ++Q E + P+ T
Sbjct: 247 LARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEIT--------- 297
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
++ K E D ++ AL+ YA+CG I+ + ++F + D+ WN+
Sbjct: 298 -------------MLNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNA 344
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
I+ +A+HG +EAL +F+ M V+P+ TF+ LL ACSHAGLV EG K+F M+
Sbjct: 345 IITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF 404
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
G+VPQ++HY CMVDLLGR G + EA ++I+ MP++P++++W L+ +CR H +L ELA
Sbjct: 405 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELA 464
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
AT+L ++EP + V MSNIY + ++ A +RK MK ++K PG S IE+ VHE
Sbjct: 465 ATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHE 524
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F G + HPQ I + L E+ +L GYVP+TS L +I+EE KE L +HSEKLA+
Sbjct: 525 FLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMA 584
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
F +++ + IRI+KN+R+C DCH KL S + G+ I+VRD NRFHHF++ CS
Sbjct: 585 FGLISTAP----STPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCS 640
Query: 585 CNDY 588
C DY
Sbjct: 641 CGDY 644
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 172/387 (44%), Gaps = 71/387 (18%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QY 102
T L++MYAK G+L AR LF+ + ++ VVSWTA+I+G + EE +LF + +
Sbjct: 231 TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEEN 290
Query: 103 FFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVF 160
FPNE ++ + K ++ + AL++MY+K C D A ++F
Sbjct: 291 IFPNEITMLN------------------KERVEVDCILNTALVDMYAK-CGDINAAGRLF 331
Query: 161 ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFS 220
R++ WN++I FA EEAL +F +++R+G+ P+ TF
Sbjct: 332 IEAISRDICMWNAIITG-------------FAMHGYGEEALDIFAEMERQGVKPNDITFI 378
Query: 221 IVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
+L AC AGLVTE ++ +G ++ R G + + ++ M
Sbjct: 379 GLLHACSHAGLVTE-GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMP 437
Query: 279 YH-DLVSWNSILKAYALHGQAK----EALQLFSNMNVQPDSATFVSLLSAC-------SH 326
+ + W +++ A LH + A QL + ++P++ + L+S S
Sbjct: 438 IKPNTIVWGALVAACRLHKNPQLGELAATQL---LEIEPENCGYNVLMSNIYAAANRWSD 494
Query: 327 AGLVQEGNKVF-------HSMLENHGVVPQLDHYACMVD----LLGRVGRIL-EAEKLIR 374
A V++ K HS++E +G V H M D + R+ +L E + +
Sbjct: 495 AAGVRKTMKTVGMKKEPGHSVIEVNGTV----HEFLMGDQSHPQIRRINEMLAEMRRKLN 550
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLA 401
E PD+ +VLL + ET L
Sbjct: 551 EAGYVPDTS--TVLLNIDEEEKETALT 575
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 33 NNFPNEPQ---------DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGY 83
N FPNE D + L++MYAK G ++ A LF E R++ W A+I+G+
Sbjct: 290 NIFPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGF 349
Query: 84 AQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDY---------LHGKLVHALALKFS 133
A HG EE +F + Q PN+ + +L +C + L K+VH F
Sbjct: 350 AMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT----FG 405
Query: 134 LDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFR 179
L + ++++ ++ DEA ++ ++M + N I W +++AA R
Sbjct: 406 LVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACR 453
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 319/594 (53%), Gaps = 67/594 (11%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP--NEFSLASVLI 115
LD AR LF P +V LI G A+ + F + + + FS A +L
Sbjct: 55 LDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLK 114
Query: 116 SCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK--------------------- 150
+ G +H A+ LD H++V L++MYS+
Sbjct: 115 AAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVA 174
Query: 151 ---------SCAD--EAWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEE 198
C D A +F M FRN+ SWN M+A + +A +LE A +LF +M ++
Sbjct: 175 WNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELEL-ARKLFLEMPVKD 233
Query: 199 ------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
EA FR+LQ+ GM P+ + + L ACA +H
Sbjct: 234 DVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHG 293
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALHGQAK 299
I K GF + NAL+ Y++CG++ +++ VF++M +VSW S++ A+HG +
Sbjct: 294 FIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGE 353
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+QLF M ++PD F+S+L ACSHAGL+++G + F+ M + + + P ++HY CM
Sbjct: 354 EAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCM 413
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDL GR G++ +A + I MP+ P ++IW LLG+C HG +LAE +L +L+P +S
Sbjct: 414 VDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNS 473
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V +SNIY ++G + +R+ M R+ K PG S IE++ ++ F +G ++ E
Sbjct: 474 GDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITE 533
Query: 477 AIFKKLEELIGQLKGMG-YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
++KL+E++ +L+ G Y+PE LHDIE+E KE+ + HSEKLA+ F I LC+
Sbjct: 534 EAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGI---ARLCK 590
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S+IRI+KN+R+C DCH MKL S + G EIVVRD +RFH FK CSC DYW
Sbjct: 591 G-SIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 139/299 (46%), Gaps = 32/299 (10%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
AC G++K A + M N P ++L N ++ Y K G L+ AR LF EMP ++
Sbjct: 181 ACFRCGDVKGA----DMMFNRMPF--RNLTSWNVMLAGYTKAGELELARKLFLEMPVKDD 234
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHGKLVHAL 128
VSW+ +I G+A +G E F F L Q PNE SL L +C GK++H
Sbjct: 235 VSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGF 294
Query: 129 ALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENM-EFRNVISWNSMIAAFRACKLEA 185
K V V NAL++ YSK C + A VFE M E R+++SW SMIA
Sbjct: 295 IEKSGFLWMVSVNNALLDTYSK-CGNVGMARLVFERMPEKRSIVSWTSMIAG-------- 345
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIA 243
A EEA+ LF +++ G+ PD F +L AC AGL+ E+ + +
Sbjct: 346 -----LAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLI-EKGYEYFYKMKD 399
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKM-TYHDLVSWNSILKAYALHGQAKEA 301
Y E ++ Y R G + + + M + W ++L A ++HG K A
Sbjct: 400 IYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLA 458
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 226 CAGLVTE----RHASAVHSLIAKYGFEDDTVIANALI--HAYARCGSISLSKQVFDKMTY 279
C+ L+T ++ VH+ + K G + D +IA L+ A + ++ ++++F
Sbjct: 8 CSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPN 67
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMN---VQP-DSATFVSLLSACSHAGLVQEGNK 335
D+ N++++ A + +L F M P DS +F LL A + ++ G +
Sbjct: 68 PDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQ 127
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+ H HG+ L +V + G + A+K+ EM EP+ V W+ ++ +C +
Sbjct: 128 L-HCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEM-FEPNVVAWNAVVTACFRC 185
Query: 396 GETRLAELAATKL 408
G+ + A++ ++
Sbjct: 186 GDVKGADMMFNRM 198
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 297/536 (55%), Gaps = 35/536 (6%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECF----RLFCSLLQYFFPNEFSLASVLISC----DY 119
MP + VSWTALI+ Y G+A E R F S ++ P+ F+ VL +C D
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMR---PDSFTAVRVLTACARVADL 57
Query: 120 LHGKLVHALALKF-SLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIA 176
G+ V A A + + V+VA A +++Y K C + +A VF+ M+ R+ ++W +M+
Sbjct: 58 ETGEAVWAAARQEEGVAESVFVATAALDLYVK-CGEMEKARSVFDEMKNRDAVAWGAMVG 116
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ A + EAL LF +Q EG PD T L AC L
Sbjct: 117 GY-------------ASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGR 163
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
++ + V+ ALI YA+CGS S + VF +M D++ WN+++ + G
Sbjct: 164 QAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTG 223
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
K A L M V+ + TF+ LL +C+H GLV +G + FH+M + + P+++HY
Sbjct: 224 HEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHY 283
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
CMVDL R G + EA +LI +MPM ++V+W LLG C+ H LAE A +L +LEP
Sbjct: 284 GCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEP 343
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+S +V +SNIY SG + A +R EMK + K P SW+E++ +VH+F G HP
Sbjct: 344 WNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHP 403
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ I+ KL+EL ++K MGY P T + + D+E E KE L HHSEK+A+ F+++
Sbjct: 404 LSDKIYAKLDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITT--- 460
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR+ KN+R+C DCH+ +KL S + +EIVVRD+NRFH F+D CSCNDYW
Sbjct: 461 -EPGETIRVTKNLRVCTDCHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 25/308 (8%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+ +FV +++Y K G ++ AR +FDEM R+ V+W A++ GYA +G+ E LF ++
Sbjct: 75 ESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAM 134
Query: 100 -LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
++ P+ +++ L +C L G+ + + + + ALI+MY+K
Sbjct: 135 QMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGST 194
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
EAW VF+ M R++I WN+MI +E+ A L Q+++ G+
Sbjct: 195 SEAWMVFQQMLERDIIVWNAMILG-------------LGMTGHEKIAFALVGQMKKSGVK 241
Query: 214 PDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ TF +L +C GLV + H++ Y ++ ++R G + +
Sbjct: 242 LNDNTFIGLLCSCTHTGLVNDGR-QYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAH 300
Query: 272 QVFDKMTY-HDLVSWNSILKAYALHGQAKEALQLFSNM-NVQP-DSATFVSLLSACSHAG 328
Q+ M + V W ++L +H A A + ++P +S +V L + S++G
Sbjct: 301 QLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSG 360
Query: 329 LVQEGNKV 336
++ K+
Sbjct: 361 RWEDAAKL 368
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 315/549 (57%), Gaps = 31/549 (5%)
Query: 53 AKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ-HGNAEECFRLFCSLLQ--YFFPNEFS 109
+ +G +D AR LF ++ + N+ SW ++I G +Q ++E LF +++ Y PN F+
Sbjct: 35 SPYGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFT 94
Query: 110 LASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENM 163
+A VL +C + G+ VHA LK + +V AL+N Y+K C D A KVF+ +
Sbjct: 95 MAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAK-CEDIVLASKVFDEI 153
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
RN+++W++MI+ + A++ EAL LFR +Q+ G+ PD T V+
Sbjct: 154 TDRNLVAWSTMISGY-------------ARIGLVNEALGLFRDMQKAGVVPDEVTMVSVI 200
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
ACA VH+ I K E D ++ AL++ YA+CG I +K+VFD M D
Sbjct: 201 SACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTK 260
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+W+S++ A++G A++AL+ F M V+P+ TF+ +LSAC+H+GLV EG + + SM
Sbjct: 261 AWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSM 320
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
LE G+VP ++ Y CMVDLL R + +A L+ MP+ P+ VIW LL C+K
Sbjct: 321 LE-FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDK 379
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
+E+ A +L +LEP ++ ++ +SN+Y + K +RK+MKG ++ PG S IE++
Sbjct: 380 SEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDG 439
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEK 520
VHEF G HP+ + + L ++ ++ +G+ P S LH++ +E KE L HSE+
Sbjct: 440 LVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSER 499
Query: 521 LALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
LA+ + ++ + IRI+KN+R+C DCH K+ S +EI+VRD RFH F +
Sbjct: 500 LAIAYGLLKT----KTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVN 555
Query: 581 RICSCNDYW 589
CSC D+W
Sbjct: 556 GSCSCRDFW 564
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 126/238 (52%), Gaps = 25/238 (10%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDAR 62
+T A + AC++ +++ Q+H +++ + F + P FV L+N YAK + A
Sbjct: 91 NTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSP---FVETALVNFYAKCEDIVLAS 147
Query: 63 HLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL- 120
+FDE+ RN+V+W+ +ISGYA+ G E LF + + P+E ++ SV+ +C
Sbjct: 148 KVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASG 207
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIA 176
GK VHA K ++ + ++ AL+NMY+K C + A +VF+ M ++ +W+SMI
Sbjct: 208 ALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIV 267
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTE 232
L A+E F +M EEA + P+ TF VL ACA GLV+E
Sbjct: 268 GLAINGLAEDALEEFFRM---EEA----------KVKPNHVTFIGVLSACAHSGLVSE 312
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G + +H ++ DL ++ L+NMYAK G ++ A+ +FD MP
Sbjct: 198 SVISACAASGALDTGKWVHAYINKQLIE--TDLELSTALVNMYAKCGCIERAKEVFDAMP 255
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDY----LHGKL 124
++ +W+++I G A +G AE+ F + + PN + VL +C + G+
Sbjct: 256 VKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRR 315
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFR-NVISWNSMIAAFRACK 182
+ L+F + + + ++++ + S ++A + E M N + W +++ + K
Sbjct: 316 YWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSK 375
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/601 (33%), Positives = 315/601 (52%), Gaps = 38/601 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSWT 77
+K Q+H I D FV + +++ A G + AR LF + K ++
Sbjct: 47 TLKDLTQIHAQTITT--GIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIAN 104
Query: 78 ALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDYLH----GKLVHALALK 131
LI YA N + + + + FP+ + +L +C + G+ +H+ K
Sbjct: 105 TLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFK 164
Query: 132 FSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
+ V V+N L+ MY+ SC + A VF+ + SWN MI + C + A
Sbjct: 165 LGWSSEVSVSNFLVQMYA-SCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARR 223
Query: 190 LFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
+F M + + E L LF+ + E + P+ L ACA L
Sbjct: 224 MFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGA 283
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+ + + + ALI Y++CGS+ + +VF KM ++++W++++
Sbjct: 284 MEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMING 343
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
A++GQ K+AL LFS M V+P+ TF+ +L+ACSH+ LV EG FHSM +G+ P
Sbjct: 344 LAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKP 403
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
H+ CMVDL GR G + +A+ +I+ MP +P+S IW LL +CR HG+T L E +L
Sbjct: 404 NAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRL 463
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
+L+P +V +SNIY G +++ +R+ M+ +V K PG S+I++ + +HEF +G
Sbjct: 464 LELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAG 523
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HPQ E I+ KL E+ +LK GY P+T L D++EE KE L HHSEKLA+ F ++
Sbjct: 524 DSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLI 583
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ IRI KN+R+C DCH+ KL S + +EI+VRD RFHHF+D CSC D+
Sbjct: 584 KTDP----GTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDF 639
Query: 589 W 589
W
Sbjct: 640 W 640
>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 217/626 (34%), Positives = 342/626 (54%), Gaps = 47/626 (7%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S Q L CA ++ +LH + + + +++N L YA G + A+
Sbjct: 5 SYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQK 64
Query: 64 LFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC--- 117
LFDE+P +++ V WT L+S ++++G +LF + + ++ S+ + C
Sbjct: 65 LFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKL 124
Query: 118 -DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
D + H +A+K + V V NAL++MY K E ++FE +E ++V+SW ++
Sbjct: 125 EDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL 184
Query: 176 AAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQ-REGMAPDW 216
+ + E+F +M E L L ++ R G ++
Sbjct: 185 DTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNF 244
Query: 217 CTFSIVLKACA---GLVTER--HASAVHS--LIAKYGFEDDTVIANALIHAYARCGSISL 269
T +L ACA LV R H A+ ++ + DD ++ AL+ YA+CG+I
Sbjct: 245 VTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDS 304
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHA 327
S VF M ++V+WN++ A+HG+ + + +F M V+PD TF ++LSACSH+
Sbjct: 305 SMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHS 364
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
G+V EG + FHS L +G+ P++DHYACMVDLLGR G I EAE L+REMP+ P+ V+
Sbjct: 365 GIVDEGWRCFHS-LRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGS 423
Query: 388 LLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
LLGSC HG+ +AE +L Q+ PG++ + MSN+Y G + A +R ++ +
Sbjct: 424 LLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGI 483
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETS-LALH--- 503
RK PGLS I + + VH F+SG + HP+ + I+ KL E+I +++ GYVP+ S L H
Sbjct: 484 RKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEG 543
Query: 504 DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
D+EE KE+ L HSEKLA+ F ++ + + + + KN+RIC DCH+ MK+ S +
Sbjct: 544 DLEE--KEQALCCHSEKLAVCFGLLET----KPSTPLLVFKNLRICRDCHSAMKIVSKVY 597
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
+EI++RD NRFH FK CSC+DYW
Sbjct: 598 DREIIIRDRNRFHQFKGGSCSCSDYW 623
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 330/630 (52%), Gaps = 78/630 (12%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD--ARHLFDEMPKRNVVSWT 77
++++ Q+H ++ + D + ++ + A + D A +FD++P+RN +W
Sbjct: 27 SMRELKQVHAFLVKT--GQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWN 84
Query: 78 ALISGYAQHGNAE-ECFRLFCSLLQ--YFFPNEFSLASVLISCDYL----HGKLVHALAL 130
+I A+ + + +FC +L PN+F+ SVL +C + GK VH L L
Sbjct: 85 TVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLL 144
Query: 131 KFSLDAHVYVANALINMYSKSCADE----------------------------------- 155
KF L +V L+ MY + E
Sbjct: 145 KFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNV 204
Query: 156 -------------AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
A ++F+ M R+V+SWN MI+ + +AIE+F +M
Sbjct: 205 MVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRM-------- 256
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+Q + P+ T VL A + L VH K D V+ +AL+ YA
Sbjct: 257 ----MQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYA 312
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
+CGSI + QVF+++ +++++WN+++ A+HG+A + S M + P T+++
Sbjct: 313 KCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIA 372
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+LSACSHAGLV EG F+ M+ + G+ P+++HY CMVDLLGR G + EAE+LI MPM+
Sbjct: 373 ILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMK 432
Query: 380 PDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
PD VIW LLG+ + H ++ AA L Q+ P DS +V +SN+Y SG+++ +R
Sbjct: 433 PDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVR 492
Query: 440 KEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETS 499
MK +RK PG SWIEI+ +HEF H + + I LEE+ +L G++P+T+
Sbjct: 493 LMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTT 552
Query: 500 LALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLA 559
L ++E+HKE L++HSEK+A+ F +++ ++ + I+KN+RIC DCH+ MKL
Sbjct: 553 QVLLKMDEKHKESVLHYHSEKIAVAFGLISTPP----KTPLCIVKNLRICEDCHSSMKLI 608
Query: 560 SDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + ++IV+RD RFHHF+ CSC DYW
Sbjct: 609 SKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 204/594 (34%), Positives = 330/594 (55%), Gaps = 31/594 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I+ + CA G +K+ Q H +++ + Q +V N LI+MY++ ++D A + D
Sbjct: 130 IFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQ--YVKNALIHMYSRCFHVDSAMQILD 187
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLH 121
+P +V S+ +++S + G E ++ ++ + + + SVL C D
Sbjct: 188 TVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQL 247
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G +HA LK L V+V++ LI+ Y K C + A K F+ + RNV++W +++ A+
Sbjct: 248 GLQIHAQLLKTGLVFDVFVSSTLIDTYGK-CGEVLNARKQFDGLRDRNVVAWTAVLTAY- 305
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ + EE L LF +++ E P+ TF+++L ACA LV + +H
Sbjct: 306 ------------LQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLH 353
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
I GF++ ++ NALI+ Y++ G+I S VF M D+++WN+++ Y+ HG K
Sbjct: 354 GRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGK 413
Query: 300 EALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL +F +M P+ TF+ +LSAC H LVQEG F +++ V P L+HY CM
Sbjct: 414 QALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCM 473
Query: 357 VDLLGRVGRILEAEKLIREMP-MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
V LLGR G + EAE ++ ++ D V W LL +C H L + + Q++P D
Sbjct: 474 VALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHD 533
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +SN++ + ++ IRK MK ++K PG SW++I N H F S G HP+
Sbjct: 534 VGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPES 593
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
IF+K+++L+ +K +GY P+ + LHD+E+E KE L HHSEKLAL + +M
Sbjct: 594 TQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKI----P 649
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KN+R+C DCH +KL S + I+VRD+NRFHHF++ +C+CND+W
Sbjct: 650 PPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 189/388 (48%), Gaps = 33/388 (8%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
++ N ++ D+ N LIN+Y+K G AR LFD M +RNVVSW+AL+ GY G
Sbjct: 50 VVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVL 109
Query: 91 ECFRLFCSL--LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANAL 144
E LF +L L +PNE+ VL C GK H LK L H YV NAL
Sbjct: 110 EVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNAL 169
Query: 145 INMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFL 203
I+MYS+ D A ++ + + +V S+NS+++A +A ++ +M +
Sbjct: 170 IHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVD------- 222
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
E + D T+ VL CA + + +H+ + K G D +++ LI Y +
Sbjct: 223 ------ECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGK 276
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSL 320
CG + +++ FD + ++V+W ++L AY +G +E L LF+ M + +P+ TF L
Sbjct: 277 CGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVL 336
Query: 321 LSACSHAGLVQEGN----KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
L+AC+ + G+ ++ S +NH +V ++++ + G I + + M
Sbjct: 337 LNACASLVALAYGDLLHGRIVMSGFKNHLIVGN-----ALINMYSKSGNIDSSYNVFSNM 391
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELA 404
M D + W+ ++ HG + A L
Sbjct: 392 -MNRDVITWNAMICGYSHHGLGKQALLV 418
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 221/653 (33%), Positives = 350/653 (53%), Gaps = 86/653 (13%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
I++++ ACA ++Q +++HE ++ QD+ + N L+ MYAK G +D A+ +FD
Sbjct: 62 IFSSVLAACARLKCLEQGLEIHERIVKR--GVKQDVGLQNALVTMYAKCGRIDRAKQVFD 119
Query: 67 EMPKRNVVSWTALISGYAQHGNAE-------------------------------ECFRL 95
+ R+VVSW A++S A+ G+ E E L
Sbjct: 120 RITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALEL 179
Query: 96 FCSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS 151
+ ++ PN +LA+VL +C D G LV A++ LD V L+N+Y++
Sbjct: 180 YREMILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARF 239
Query: 152 CADEAWK--VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE------------ 197
A + +F++M+ R V+SWN+M+ AF +A +LF +M ++
Sbjct: 240 GDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGF 299
Query: 198 ------EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED-- 249
++AL LFR++ EG+ P T+ VL ACA L AS++ I G ++
Sbjct: 300 GQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLT----ASSLGRFICD-GMDEAL 354
Query: 250 --DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
D +AN++ + Y +CG L++Q F +MTY D+VSW +I+ AY+ +G + EAL +F
Sbjct: 355 AKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRI 414
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN--HGVVPQLDHYACMVDLLGR 362
M V+P+ T ++ LSACSH L EG+ +F S++ +GV H+ C +DLLGR
Sbjct: 415 MVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGR 474
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG---DSLGF 419
G + +AE LI +MP + +V W+ LL +CR + + A A L +L+ D +
Sbjct: 475 AGYLKDAETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPY 534
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V +SNIY +G +R +++ +K PG S I I+ + +EF S + HP+R+ +
Sbjct: 535 VMLSNIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAY 594
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN---QGSLCRE 536
+L L ++K GYVP+T +A EEE E+ L +HSEKLAL F ++N + SLC
Sbjct: 595 NELRRLFQKMKEAGYVPDTRIAEM--EEEETEQSLSYHSEKLALAFGVLNTPPEASLC-- 650
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I+KN+R+C DCHN +K S L ++I VRD+ RFHHF++ CSC D W
Sbjct: 651 -----IVKNLRVCSDCHNVIKFLSKHLNRKIAVRDATRFHHFENGFCSCRDCW 698
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 200/419 (47%), Gaps = 45/419 (10%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY---FFPNE 107
MY G L+DAR +FD MP RN SW +IS Y G +E L+ +L++ +
Sbjct: 1 MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60
Query: 108 FSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFE 161
F +SVL +C L G +H +K + V + NAL+ MY+K C D A +VF+
Sbjct: 61 FIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAK-CGRIDRAKQVFD 119
Query: 162 NMEFRNVISWNSMIAA-FRACKLEAQAIELFAKM------------------KNEEEALF 202
+ R+V+SWN+M++A A LE A++++ +M ++ EAL
Sbjct: 120 RITHRDVVSWNAMVSANAEAGHLEV-ALKIYQEMVSADVLCWSTMISAEAMAGHDREALE 178
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
L+R++ + P+ T + VL AC L + V + G + D V+ L++ YA
Sbjct: 179 LYREMILS-VRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYA 237
Query: 263 RCGSISLSKQV-FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSA--TFVS 319
R G + +++V FD M +VSWN+++ A+A + + EA +LF M PD + ++ +
Sbjct: 238 RFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREM---PDKSVISWNA 294
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+++ G ++ ++F M + G+ P Y ++D L A L R +
Sbjct: 295 MIAGFGQNGRPKQALELFRRM-DLEGLQPSRMTYCSVLDACAN----LTASSLGRFICDG 349
Query: 380 PDSVI---WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKA 435
D + SV C +G+ L ELA ++ D + + + Y +G ++A
Sbjct: 350 MDEALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEA 408
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 336/593 (56%), Gaps = 33/593 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+ +CA G I Q+H I D+ V+N L+ +YA+ +++ + +F MP
Sbjct: 461 STLSSCASLGWIMLGQQIHGEGIK--CGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP 518
Query: 70 KRNVVSWTALISGYA-QHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GK 123
+ + VSW + I A + + + F ++Q + PN + ++L + L G+
Sbjct: 519 EYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGR 578
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCADEAWKV-FENM-EFRNVISWNSMIAAFRAC 181
+HAL LK S+ + N L+ Y K E ++ F M E R+ +SWN+MI+ +
Sbjct: 579 QIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHN 638
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ +A+ L M ++G D T + VL ACA + T VH+
Sbjct: 639 GILHKAMGLVWLM-------------MQKGQRLDDFTLATVLSACASVATLERGMEVHAC 685
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ E + V+ +AL+ YA+CG I + + F+ M ++ SWNS++ YA HG +A
Sbjct: 686 AIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKA 745
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L+LF+ M PD TFV +LSACSH GLV EG + F SM E + + P+++H++CMVD
Sbjct: 746 LKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVD 805
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE--TRLAELAATKLKQLEPGDS 416
LLGR G + + E+ I+ MPM P+++IW +LG+C + T L AA L +LEP ++
Sbjct: 806 LLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNA 865
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+ +V +SN++ G + R M+ + V+K G SW+ +++ VH F +G + HP++E
Sbjct: 866 VNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKE 925
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ KL+E++ +++ +GYVPET AL+D+E E+KEE L +HSEKLA+ F + Q L
Sbjct: 926 KIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRQSEL--- 982
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IRI+KN+R+C DCH K S+++ ++I++RDSNRFHHF ICSC DYW
Sbjct: 983 --PIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 196/394 (49%), Gaps = 43/394 (10%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
++ A QLH + D+F N L+N++ + G L A+ LFDEMP++N+VSW+ L
Sbjct: 54 TVEDAHQLHLQIYKT--GLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCL 111
Query: 80 ISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH------GKLVHALALKF 132
+SGYAQ+G +E LF ++ PN +++ S L +C L G +H L K
Sbjct: 112 VSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKS 171
Query: 133 SLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIEL 190
+ + ++N L++MYS A D+A +VFE ++ + SWNS+I+ + C+ AI
Sbjct: 172 PYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVY--CR-RGDAISA 228
Query: 191 FAKMKNEEEALFLFRQLQREGMA----PDWCTF-SIVLKACA----GLVTERHASAVHSL 241
F LF +QRE P+ TF S+V AC+ GL A
Sbjct: 229 FK----------LFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLA---R 275
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
I K F D + +AL+ +AR G I +K +F++M + V+ N ++ A Q +EA
Sbjct: 276 IEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEA 335
Query: 302 LQLFSNMN--VQPDSATFVSLLSACSHAGLVQEGNK----VFHSMLENHGVVPQLDHYAC 355
++F M V+ +++++ LLSA + ++EG + V ++ N V +
Sbjct: 336 AKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNA 395
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+V+L + I A + + MP D+V W+ ++
Sbjct: 396 LVNLYAKCNAIDNARSIFQLMP-SKDTVSWNSII 428
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 37/394 (9%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEP--QDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
AC+L + + L E M+ +DL+V + L++ +A++G +D A+ +F++M R
Sbjct: 258 ACSL---VDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDR 314
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL--------HGK 123
N V+ L+ G A+ EE ++F + N S A +L + G+
Sbjct: 315 NAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQ 374
Query: 124 LVHALALKFSL-DAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRAC 181
VHA ++ +L D + + NAL+N+Y+K A D A +F+ M ++ +SWNS+I+
Sbjct: 375 EVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLD-- 432
Query: 182 KLEAQAIELFAKMKNE--EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
NE EEA+ F ++R GM P + L +CA L +H
Sbjct: 433 -------------HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIH 479
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL-HGQA 298
K G + D ++NAL+ YA + ++VF M +D VSWNS + A A
Sbjct: 480 GEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASV 539
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+A++ F M +P+ TF+++LSA S L++ G ++ H+++ H V
Sbjct: 540 LQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQI-HALILKHSVADDNAIENT 598
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++ G+ ++ + E + M D V W+ ++
Sbjct: 599 LLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMI 632
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 159/351 (45%), Gaps = 39/351 (11%)
Query: 116 SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSM 174
SC +H K L + V+ N L+N++ ++ A K+F+ M +N++SW+ +
Sbjct: 52 SCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCL 111
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE-- 232
++ +A+ +EA LFR + G+ P+ L+AC L
Sbjct: 112 VSG-------------YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNML 158
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTYHDLVSWNSILKA 291
+ +H LI+K + D V++N L+ Y+ C SI +++VF+++ SWNSI+
Sbjct: 159 KLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISV 218
Query: 292 YALHGQAKEALQLFSNM-------NVQPDSATFVSLLS-ACSHAGLVQEGNKVFHSML-- 341
Y G A A +LFS+M N +P+ TF SL++ ACS LV G + ML
Sbjct: 219 YCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLAR 275
Query: 342 -ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
E V L + +V R G I A+ + +M + +++G R+H
Sbjct: 276 IEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQ---- 331
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK-ARLIRKEMKGSRVRKY 450
E AA K+++ L + S+ L +F + + L + KG V Y
Sbjct: 332 GEEAAKIFKEMK---DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAY 379
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
AT+ ACA +++ M++H I ++ V + L++MYAK G +D A F+ M
Sbjct: 664 ATVLSACASVATLERGMEVHACAIRACLE--AEVVVGSALVDMYAKCGKIDYASRFFELM 721
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYL 120
P RN+ SW ++ISGYA+HG+ + +LF + Q+ P+ + VL +C ++
Sbjct: 722 PVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHV 774
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 217/636 (34%), Positives = 329/636 (51%), Gaps = 82/636 (12%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDAR---- 62
+ A + CA G+++ ++H ++ + D+ + N +++MYAK G AR
Sbjct: 128 VLAGVLRCCAGLGDVESGRRIHGWILRS--GVCPDVVLCNAVLDMYAKCGDHGRARRAFG 185
Query: 63 ---------------------------HLFDEMPKRNVVSWTALISGYAQHGNAEECF-- 93
LFDE R+V SW ++SG +HG+ E
Sbjct: 186 AMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGR 245
Query: 94 -----RLFCSLLQYFFPNEFSLASVLISCDY---LHGKLVHALALKFSLDAHVYVANALI 145
R + Y + F+LA +L S D LHG++V A+ L+ +V +L+
Sbjct: 246 LQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAV-----LEEDAFVGCSLM 300
Query: 146 NMYSKSCAD--------EAWKVF-ENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
+MY K C + + W F E+ +F +W++M+A + +
Sbjct: 301 DMYCK-CGEMESALSIFDRWSDFTEDRQF----AWSTMVAGY-------------VQNGR 342
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
EEEAL FR++ REG+ + V ACA VH + K G D +A+A
Sbjct: 343 EEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASA 402
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPD 313
++ Y++ GS+ + ++F ++ W ++L +YA HGQ + AL++FS M + P+
Sbjct: 403 IVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPN 462
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T V++LSACSH+GLV +G F+ M E +G+VP +HY CMVDL GR G + +A+ I
Sbjct: 463 EITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFI 522
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
E + ++V+W LL +CR H A+LA+ KL QLE D+ +V MSN+Y + +
Sbjct: 523 EENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWL 582
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
+R MK RVRK PG SWI ++N VH F + HP+ I+ LE+L+ +LK MG
Sbjct: 583 DTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMG 642
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
Y T L +HDIEEE +E L HSEKLA+ F I++ + +RI KN+R+C DCH
Sbjct: 643 YTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPV----GTALRIFKNLRVCEDCH 698
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K + +EIVVRD RFHHFKD CSC D+W
Sbjct: 699 EAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 185/387 (47%), Gaps = 56/387 (14%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ---YFFPNEFSLASVL 114
L +A +FD P R++ +WT++ISG A+ G + R F +L PN F LA VL
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 115 ISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNV 168
C D G+ +H L+ + V + NA+++MY+K C D A + F M ++
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAK-CGDHGRARRAFGAMAQKDA 192
Query: 169 ISWNSMIAAFRACKLEAQ---AIELF------------------AKMKNEEEALFLFRQL 207
SWN +I RAC + A +LF + + EAL +Q+
Sbjct: 193 TSWNIVI---RACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQM 249
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERH-ASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
R G+ T+S+V A AGL++ R +H + E+D + +L+ Y +CG
Sbjct: 250 VRAGVTFSNYTYSMVF-ALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGE 308
Query: 267 ISLSKQVFDK---MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSL 320
+ + +FD+ T +W++++ Y +G+ +EAL+ F M V S+
Sbjct: 309 MESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSV 368
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY------ACMVDLLGRVGRILEAEKLIR 374
SAC++AG+V++G +V HG V +L H + +VD+ + G + +A ++ R
Sbjct: 369 ASACANAGMVEQGRQV-------HGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFR 421
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + +W+ +L S HG+ R+A
Sbjct: 422 SAQTK-NVALWTTMLCSYASHGQGRMA 447
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACK 182
K +H +++ + + +A L N A +VF+ R++ +W S+I+
Sbjct: 53 KAIHRQSVRGCVPSSSVIARGLHN---------AHRVFDGTPTRSLPAWTSIISGCAREG 103
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
A + FA+M +E A AP+ + VL+ CAGL +H I
Sbjct: 104 RHADGMRAFAEMLDECGA-----------TAPNAFVLAGVLRCCAGLGDVESGRRIHGWI 152
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
+ G D V+ NA++ YA+CG +++ F M D SWN +++A G A
Sbjct: 153 LRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGAT 212
Query: 303 QLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKV 336
QLF +++ D +++ +++S GL++ G+
Sbjct: 213 QLFDESSLR-DVSSWNTIVS-----GLMRHGHTT 240
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 212/595 (35%), Positives = 327/595 (54%), Gaps = 29/595 (4%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+L + CA G +++ Q+H + D+FV L+NMY+K G +D
Sbjct: 108 YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALK--IGFGSDVFVQGSLVNMYSKCGEIDC 165
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL 120
AR +FD M ++VV W +LI GYA+ G + +LF + + + FS +VL+
Sbjct: 166 ARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER---DAFSW-TVLVDGLSK 221
Query: 121 HGKLVHALALKFSLDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
GK+ A L + V+ NA+IN Y KS D A ++F M ++++WN MIA +
Sbjct: 222 CGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGY 281
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+L Q ++ A+ +F + + G P T VL A +GL +
Sbjct: 282 ---ELNGQFMD----------AVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWI 328
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
HS + K GFE D ++ +LI YA+CG I + VF + + W +I+ +HG A
Sbjct: 329 HSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMA 388
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
AL LF M ++P++ F+ +L+AC+HAGLV +G + F M+ + + P L+HY C
Sbjct: 389 NHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGC 448
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
+VD+L R G + EA+ I MP+ P+ VIW LLG R HG+ + E AA ++ ++ P
Sbjct: 449 LVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPET 508
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
++ +SN+Y SG + K +R+ M RK PG S +E + +HEF G HPQ
Sbjct: 509 IGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQT 568
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIE-EEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I+ K+ E+ +LK +G+VP+T+ L IE E+ KE +L +HSE+LA+ F ++N
Sbjct: 569 KEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLIN----V 624
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRIMKN+R+C DCH+ KL S + +EI+VRD+ RFHHFK+ CSC DYW
Sbjct: 625 KPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 38/347 (10%)
Query: 43 FVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
FV++ L+ +Y+ K L AR +FD + +R+++ W +I Y ++ + + LF L+
Sbjct: 46 FVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV 105
Query: 101 QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA--D 154
+ P+ F+L V+ C L GK +H LALK + V+V +L+NMYSK C D
Sbjct: 106 HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSK-CGEID 164
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
A KVF+ M ++V+ WNS+I + C A++LF +M + A
Sbjct: 165 CARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERD--------------AF 210
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
W L C + + R + + + V NA+I+ Y + G + ++F
Sbjct: 211 SWTVLVDGLSKCGKVESAR--KLFDQMPCR-----NLVSWNAMINGYMKSGDFDSALELF 263
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+M DLV+WN ++ Y L+GQ +A+++F M +P AT VS+LSA S ++
Sbjct: 264 YQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLG 323
Query: 332 EGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREM 376
+G + HS +E +G +LD ++++ + G I A + R +
Sbjct: 324 KGRWI-HSYMEKNGF--ELDGILGTSLIEMYAKCGCIESALTVFRAI 367
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 24/276 (8%)
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFRAC 181
+HA +LK ++ H +V++ L+ +YS ++ A +F+ ++ R++I WN++I C
Sbjct: 32 LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK----C 87
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+E Q + + LF +L E + PD T V+K CA L + +H L
Sbjct: 88 YVENQF---------SHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGL 137
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K GF D + +L++ Y++CG I +++VFD M D+V WNS++ YA G+ A
Sbjct: 138 ALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIA 197
Query: 302 LQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
LQLF M + D+ ++ L+ S G V+ K+F M L + M++
Sbjct: 198 LQLFEEMP-ERDAFSWTVLVDGLSKCGKVESARKLFDQM-----PCRNLVSWNAMINGYM 251
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ G A +L +MP+ D V W++++ +G+
Sbjct: 252 KSGDFDSALELFYQMPIW-DLVTWNLMIAGYELNGQ 286
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 203/578 (35%), Positives = 323/578 (55%), Gaps = 37/578 (6%)
Query: 45 TNHLINMYAK-FGYLDDARHLFDEMPKRNVVSWTALISGYA-QHGNAEECFRLFCSLL-- 100
TN L+ + F + A +FD P+ ++ + +I A ++ + F F SL+
Sbjct: 36 TNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRE 95
Query: 101 QYFFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
+ PN++S A C L G+ V A+K L+ +++V NALI MY +
Sbjct: 96 ERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVD 155
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE----------------- 198
A KVF+ R++ SWN M++ + +A +LF +M ++
Sbjct: 156 ARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYF 215
Query: 199 -EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
EAL +F + +GM+P+ T + L ACA LV +H I K + + + L
Sbjct: 216 MEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGL 275
Query: 258 IHAYARCGSISLSKQVFDKMTY--HDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---P 312
I YA+CG + + ++F+ + WN+++ +A+HG++KEA+++F M ++ P
Sbjct: 276 IDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSP 335
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ TFV+LL+ACSH V+EG F SM ++ V P+L+HY C+VDLLGR GR+ EAE++
Sbjct: 336 NKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEI 395
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
I M + PD IW LL +C+ H + + E +K+L+P V ++NIY L+G++
Sbjct: 396 ISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNW 455
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
N+AR +R+++ S +K PG S IE+ H+F G + HPQ + ++ L+E+I +LK
Sbjct: 456 NEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIA 515
Query: 493 GYVPETSLALHDIEE-EHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GY+PE+ L DI++ E +E L HSEKLA+ F +MN ++ IRI+KN+R+C D
Sbjct: 516 GYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNT----TPKTPIRIVKNLRVCSD 571
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH +K S + +EI+VRD R+HHFKD CSCNDYW
Sbjct: 572 CHLAIKFISKVYDREIIVRDRIRYHHFKDGTCSCNDYW 609
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 161/334 (48%), Gaps = 62/334 (18%)
Query: 36 PNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL 95
PN +D++ N +++ YA+ G +D+AR LFDEMP+++VVSWT +ISG Q G E +
Sbjct: 164 PN--RDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDI 221
Query: 96 FCSLL-QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK 150
F ++L + PNE++LAS L +C L G+ +H K ++ + + LI+MY+K
Sbjct: 222 FHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAK 281
Query: 151 SCADE-AWKVFENMEF--RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
E A K+F + R V WN+MI F +AIE+F +MK E+
Sbjct: 282 CGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEK--------- 332
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
++P+ TF +L AC+ H + V +Y FE + ++ R
Sbjct: 333 ----VSPNKVTFVALLNACS------HGNRVEE--GRYYFES--------MASHYRVKP- 371
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHA 327
+L + ++ G+ KEA ++ S+M++ PD A + +LLSAC
Sbjct: 372 -------------ELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIH 418
Query: 328 GLVQEGNKVFHSMLENHGVVPQLD--HYACMVDL 359
+ G +V +V +LD H C V L
Sbjct: 419 KDAEMGERV-------GKIVKELDPNHLGCHVLL 445
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 202/565 (35%), Positives = 304/565 (53%), Gaps = 36/565 (6%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+L + N LI Y K + +A+ +F MPK + V+W ALI G+A + E F +
Sbjct: 395 DELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLM 454
Query: 100 LQYFFP--NEFSLASVLISCDYLHGKLV--------HALALKFSLDAHVYVANALINMYS 149
+ + ++ ++L SC H L+ H + F LD HV ++LI MY+
Sbjct: 455 REGSTSGVDYITIVNILGSC-LTHEDLIKYGIPIHAHTVVTGFDLDQHV--QSSLITMYA 511
Query: 150 KSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K C D + +F+ + F+ WN++IAA A+ EEAL L ++
Sbjct: 512 K-CGDLHSSSYIFDQLVFKTSSVWNAIIAAN-------------ARYGFGEEALKLVVRM 557
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
+ G+ D FS L A L +H K GFE D I NA + Y +CG +
Sbjct: 558 RSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGEL 617
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ ++ + T +SWN+++ A HGQ +A + F +M V+P+ +FV LLSAC
Sbjct: 618 DDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSAC 677
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH GLV EG + SM +G+ P ++H CM+DLLGR GR++EAE I EMP+ P+ ++
Sbjct: 678 SHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLV 737
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LL SCR + L AA L +L+P D +V SN++ G + +R +M
Sbjct: 738 WRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGA 797
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
+++K P SW++ + + F G + HPQ E I KL L+ + GYVP+TS +L D
Sbjct: 798 HKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQD 857
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
+EE KE ++ HSE++AL F ++N E S +RI KN+R+C DCH+F K S +LG
Sbjct: 858 TDEEQKEHNMWSHSERIALAFGLIN----IPEGSTVRIFKNLRVCGDCHSFFKFVSGVLG 913
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
++IV+RD RFHHF + CSC+DYW
Sbjct: 914 RKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 203/401 (50%), Gaps = 29/401 (7%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV ++ YA +G + +A+ +F+EMP RNVVSWT+L+ Y+ +G+ +E + +
Sbjct: 93 DVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMR 152
Query: 101 -QYFFPNEFSLASVLISCDYLHGKLV-HAL---ALKFSLDAHVYVANALINMYSKSCAD- 154
+ NE ++A V+ SC +L ++ H L ALKF L+ V AN+LI M+ C D
Sbjct: 153 HEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFG-GCGDI 211
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
EA +F M R+ ISWNS+I+A L ++ F M+ E +
Sbjct: 212 NEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEI------------ 259
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
++ T SI+L C + + VH L KYG E + + N L+ Y+ G ++ +
Sbjct: 260 -NYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELI 318
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLV 330
F +M DL+SWNS+L Y G+ AL++F+ M + + TF S L+AC
Sbjct: 319 FRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFF 378
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
G K+ H + G+ +L ++ G+ ++ EA+K+ + MP + D V W+ L+G
Sbjct: 379 TNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMP-KLDKVTWNALIG 436
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIY--CLS 429
+ E A +AA KL + + ++ + NI CL+
Sbjct: 437 GFANNAELNEA-VAAFKLMREGSTSGVDYITIVNILGSCLT 476
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 176/360 (48%), Gaps = 33/360 (9%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEEC---FRLFCSLLQYFFPNE 107
MY+KFG ++ A+ +FD M +RN SW ++SGY + G+ E FR C + P+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGI--GIKPSG 58
Query: 108 FSLASVLISCD-----YLHGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFE 161
F +AS++ +C+ G H A+K L V+V + ++ Y S A K+F
Sbjct: 59 FMIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFN 118
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
M RNV+SW S++ + ++ +++E + +++++ EG+ + ++
Sbjct: 119 EMPDRNVVSWTSLMVS-------------YSDNGSKKEVINTYKRMRHEGICCNENNIAL 165
Query: 222 VLKACAGL--VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
V+ +C L + H H+L K+G E AN+LI + CG I+ + +F++M
Sbjct: 166 VISSCGFLMDIILGHQLLGHAL--KFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNE 223
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKV 336
D +SWNSI+ A A + +E+ + F M + + + T LLS C ++ G V
Sbjct: 224 RDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGV 283
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H + +G+ + ++ + GR +AE + R MP E D + W+ +L + G
Sbjct: 284 -HGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP-ERDLISWNSMLACYVQDG 341
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 314/592 (53%), Gaps = 41/592 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK-FGYLDDARHLFD 66
Y+ + +AC+ + Q+H ++ D+ V N L++MY K ++DA F
Sbjct: 320 YSGILNACSSILALDLGKQIHSRVV--MAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFR 377
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYL----H 121
+ NV+SWT+LI+G+++HG EE ++F ++ PN F+L+++L +C +
Sbjct: 378 GIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQ 437
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +H +K + D V V NAL++ Y+ D+AW V M+ R+VI++ S+
Sbjct: 438 TRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRIN- 496
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ N E AL + + ++ + D + + L A AG+ +H
Sbjct: 497 ------------QTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHC 544
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K G ++N L+ Y +CG I + + F ++T D VSWN ++ A +G
Sbjct: 545 YSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSS 604
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL F +M V+PD T + +L ACSH GLV G F SM E HG+ PQLDHY C+V
Sbjct: 605 ALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLV 664
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLLGR GR+ EA +I MP +PD++I+ LLG+C+ HG L E A + +L+P D
Sbjct: 665 DLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPA 724
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V ++N+Y SG R+ M+ VRK PG SW+E N VH F +G HPQ
Sbjct: 725 FYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGK 784
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I +K+E LI Q + G + + AL HHSEKLA+ F +++ +
Sbjct: 785 IHEKIESLIAQFRNQGIWYQENRALA------------HHSEKLAVAFGLIST----PPK 828
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IRI+KNIRIC DCH+F+ + L+ +EI+VRD NRFH FK CSC YW
Sbjct: 829 APIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 195/367 (53%), Gaps = 26/367 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+F++N+L+++Y K + +AR LFDEMP R+V SWT L+S Y + GN EE LF S+
Sbjct: 48 EDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSM 107
Query: 100 L-QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCA 153
L +PNEF+L++ L SC L HG AL K D++ + +ALI+ YSK C
Sbjct: 108 LISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCT 167
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
EA++VFE M +++SW M+++F +QA++L+ +M + G+A
Sbjct: 168 QEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMI-------------QTGVA 214
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
P+ TF + L A + + + VH+ + + E + V+ AL+ Y +C SI + +V
Sbjct: 215 PNEFTF-VKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKV 273
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
+D+ W +I+ + + +EA+ F M V P++ T+ +L+ACS +
Sbjct: 274 SKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILAL 333
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE-AEKLIREMPMEPDSVIWSVLL 389
G ++ HS + G+ + +VD+ + ++E A + R + P+ + W+ L+
Sbjct: 334 DLGKQI-HSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIA-SPNVISWTSLI 391
Query: 390 GSCRKHG 396
+HG
Sbjct: 392 AGFSEHG 398
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 139/272 (51%), Gaps = 20/272 (7%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRA 180
G +H+ +K ++++N L+++Y K EA ++F+ M R+V SW +++A+
Sbjct: 34 GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAY-- 91
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
K+ N EEAL LF + G P+ T S L++C+ L H + +
Sbjct: 92 -----------GKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQA 140
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
L+ K GF+ + V+ +ALI Y++CG + +VF+ M D+VSW ++ ++ G +
Sbjct: 141 LVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQ 200
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
ALQL+ M V P+ TFV LL+A S GL K+ H+ L + L +V
Sbjct: 201 ALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL--NYGKLVHAHLMMWRIELNLVLKTALV 258
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
D+ + I +A K + ++ +E D +W+ ++
Sbjct: 259 DMYCKCQSIEDAVK-VSKLTLEYDVFLWTAII 289
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 204/506 (40%), Positives = 280/506 (55%), Gaps = 37/506 (7%)
Query: 93 FRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVHALALKFSLDAHVYVANALINMYSKS 151
F F LLQ F S LH G+ VHA L+F L +V +LI+MYS S
Sbjct: 64 FHTFPFLLQSF-----------ASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSS 112
Query: 152 -CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D A +F M RNVISW+ MI + C +EAL LFR++Q
Sbjct: 113 GLVDMARNLFAVMPERNVISWSCMINGYVRCG-------------QYKEALALFREMQML 159
Query: 211 GM---APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
G+ P+ T S VL AC L H H+ I K G D V+ ALI YA+CGS+
Sbjct: 160 GVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSV 219
Query: 268 SLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+ VF + + D+++W++++ A+HG A+E + LFS M V+P++ TF+++ A
Sbjct: 220 EKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCA 279
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C H GLV EG M E++ ++P + HY CMVDL GR GRI EA +++ MPMEPD +
Sbjct: 280 CVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVL 339
Query: 384 IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMK 443
+W LL R HG+ ELA KL +LEP +S +V +SN+Y G + R +R M+
Sbjct: 340 VWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLME 399
Query: 444 GSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH 503
++K PG S IE+ +HEF G HP+ I LEE++ +LK GYV T L
Sbjct: 400 TMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLL 459
Query: 504 DIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
D++EE KE L HSEKLAL + + + IRI+KN+RIC DCH +K+ S +
Sbjct: 460 DLDEEGKELALSLHSEKLALAYGFLKTSP----GTPIRIVKNLRICRDCHVAIKMISKVF 515
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
+EI+VRD NRFHHF +CSC DYW
Sbjct: 516 DREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 28/296 (9%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D FV LI+MY+ G +D AR+LF MP+RNV+SW+ +I+GY + G +E LF +
Sbjct: 98 DPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQ 157
Query: 100 ---LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-S 151
+ PNEF+++ VL +C L HGK HA K + V + ALI+MY+K
Sbjct: 158 MLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCG 217
Query: 152 CADEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
++A VF N+ ++V++W++MI+ L + + LF+KM N +
Sbjct: 218 SVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMIN-------------Q 264
Query: 211 GMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G+ P+ TF V AC GLV+E + + Y ++ Y R G I
Sbjct: 265 GVRPNAVTFLAVFCACVHGGLVSE-GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIK 323
Query: 269 LSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEA-LQLFSNMNVQPDSATFVSLLS 322
+ V M D++ W ++L +HG + L L + ++P ++ LLS
Sbjct: 324 EAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLS 379
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 112/232 (48%), Gaps = 15/232 (6%)
Query: 171 WNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
WN++I A ++A+A + +F +++ G+ PD+ TF +L++ A
Sbjct: 27 WNTLIRA----HVQARA----QPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPS 78
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+VH+ I ++G D + +LI Y+ G + +++ +F M +++SW+ ++
Sbjct: 79 LLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMIN 138
Query: 291 AYALHGQAKEALQLFSNM------NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
Y GQ KEAL LF M +V+P+ T +L+AC G ++ G K H+ ++
Sbjct: 139 GYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHG-KWAHAYIDKC 197
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G+ + ++D+ + G + +A + + D + WS ++ HG
Sbjct: 198 GMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHG 249
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM-PKRN 72
AC G ++ H ++ + P D+ + LI+MYAK G ++ A +F + P ++
Sbjct: 177 ACGRLGALEHGKWAHAYI--DKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKD 234
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV------ 125
V++W+A+ISG A HG AEEC LF ++ Q PN + +V +C +HG LV
Sbjct: 235 VMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCAC--VHGGLVSEGKDY 292
Query: 126 -HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFR-NVISWNSMIAAFR 179
+ +S+ + ++++Y ++ EAW V ++M +V+ W ++++ R
Sbjct: 293 LRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSR 349
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 323/598 (54%), Gaps = 38/598 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHE--HMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
ST T + C L G + +L + H+ + P D+ N L+ + G D A
Sbjct: 42 STPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTP--DVVSYNTLLLCHFASGDADGA 99
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLA-SVLISCDYL 120
R LF MP R+V SW ++SG ++ G EE +F ++ P S++ + ++S
Sbjct: 100 RRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAM-----PVRNSVSWNAMVSGFAC 154
Query: 121 HGKLVHALALKFSLDA----HVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMI 175
G + + A ++ +A + A+++ Y +A K FE M RN++SWN+++
Sbjct: 155 SGDM--STAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVV 212
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG-MAPDWCTFSIVLKACAGLVTERH 234
A + K + ++AL LFR + RE + P+ T S VL C+ L
Sbjct: 213 AGY-------------VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 259
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H K + + +L+ Y +CG +S + +F +M D+V+WN+++ YA
Sbjct: 260 GKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQ 319
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG KEA+ LF M V+P+ TFV +L+AC H GL G + F M E +G+ P++D
Sbjct: 320 HGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVD 379
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY+CMVDLL R G++ A IR MP EP + LL +CR + AELAA KL +
Sbjct: 380 HYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEK 439
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+P + +VQ++NIY ++ ++ +R+ MK + V K PG SWIEI+ +HEF S +
Sbjct: 440 DPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRL 499
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HPQ I +KL +L ++K MGYVP+ LHD++E K + L HSEKLA+ F +++
Sbjct: 500 HPQLYLIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTA 559
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+RI KN+R+C DCHN K+ S + +EI++RD+ RFHHF+ CSC+DYW
Sbjct: 560 ----HGMTLRIFKNLRVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 268/452 (59%), Gaps = 21/452 (4%)
Query: 142 NALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEA 200
A+I Y+K DEA +F+ +E R+ I WN MI + A+ E
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGY-------------AQHGLPNEG 56
Query: 201 LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHA 260
L LFRQ+ + P+ T VL AC VHS I G + + +LI
Sbjct: 57 LLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDM 116
Query: 261 YARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATF 317
Y++CGS+ ++ VF++++ D+V+WNS++ YA+HG +++AL+LF M QP TF
Sbjct: 117 YSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITF 176
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
+ +L+ACSHAGLV EG K F+SM + +G+ P+++HY CMV+LLGR G + EA +L++ M
Sbjct: 177 IGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNME 236
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARL 437
++ D V+W LLG+CR HG L E A L +S +V +SNIY +G++
Sbjct: 237 IDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVAR 296
Query: 438 IRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPE 497
+R MK S K PG S IE+ N+VHEF +G RHP+ I++ LEE+ G LK GY P+
Sbjct: 297 VRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQ 356
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
T + LHD+E+ KE L HSEKLAL F ++ + + I+I+KN+R+C DCH K
Sbjct: 357 TDIVLHDLEDAQKERSLGVHSEKLALAFGLITT----KPGTTIKIVKNLRVCADCHAVTK 412
Query: 558 LASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
L S + G+++V+RD NRFHHF + +CSC DYW
Sbjct: 413 LISKITGRKVVMRDRNRFHHFVNGLCSCGDYW 444
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 26/302 (8%)
Query: 39 PQDLFVT-NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
P+ V+ +I YAK+G +D+AR LFD + +R+ + W +I GYAQHG E LF
Sbjct: 2 PEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFR 61
Query: 98 SLLQY-FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+L PNE ++ +VL +C G+ VH+ + +V V +LI+MYSK
Sbjct: 62 QMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCG 121
Query: 153 A-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
+ ++A VFE + ++V++WNSM+ + A+ F+ ++AL LF+++ G
Sbjct: 122 SLEDARLVFERISNKDVVAWNSMVVGY--------AMHGFS-----QDALRLFKEMCMIG 168
Query: 212 MAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
P TF VL AC AGLV+E +S+ +YG E +++ R G +
Sbjct: 169 YQPTDITFIGVLNACSHAGLVSEGW-KFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEE 227
Query: 270 SKQVFDKMTY-HDLVSWNSILKAYALHGQAKEALQLFSNMNVQ--PDSATFVSLLSACSH 326
+ ++ M D V W ++L A LHG Q+ + Q +S T+V L + +
Sbjct: 228 AYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAA 287
Query: 327 AG 328
AG
Sbjct: 288 AG 289
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E V A+I YA+ G I ++ +FD + D + WN ++ YA HG E L LF
Sbjct: 3 EKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
M V+P+ T +++LSAC G ++ G V HS +EN+G+ + ++D+ + G
Sbjct: 63 MLNAKVRPNEVTVLAVLSACGQTGALETGRWV-HSYIENNGIGINVRVGTSLIDMYSKCG 121
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
LE +L+ E D V W+ ++ HG
Sbjct: 122 S-LEDARLVFERISNKDVVAWNSMVVGYAMHG 152
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 97/179 (54%), Gaps = 14/179 (7%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ AC G ++ +H ++ NN ++ V LI+MY+K G L+DAR +F+ +
Sbjct: 78 VLSACGQTGALETGRWVHSYIENNGIG--INVRVGTSLIDMYSKCGSLEDARLVFERISN 135
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV---- 125
++VV+W +++ GYA HG +++ RLF + + P + + VL +C H LV
Sbjct: 136 KDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACS--HAGLVSEGW 193
Query: 126 ---HALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEF-RNVISWNSMIAAFR 179
+++ ++ ++ V ++N+ ++ +EA+++ +NME ++ + W +++ A R
Sbjct: 194 KFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACR 252
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 330/581 (56%), Gaps = 32/581 (5%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ M+LH ++I + +L V N LI+MY+K F M ++++SWT +
Sbjct: 401 NLLAGMELHAYVIKH--GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHGKLV----HALALKFSL 134
I+GYAQ+ E LF + + +E L S+L + L L+ H L+ L
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518
Query: 135 DAHVYVANALINMYSKSCADEAW--KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFA 192
V + N L+++Y K C + + +VFE+++ ++V+SW SMI++ A
Sbjct: 519 LDTV-IQNELVDVYGK-CRNMGYATRVFESIKGKDVVSWTSMISSS-------------A 563
Query: 193 KMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV 252
NE EA+ LFR++ G++ D +L A A L +H + + GF +
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 623
Query: 253 IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---N 309
IA A++ YA CG + +K VFD++ L+ + S++ AY +HG K A++LF M N
Sbjct: 624 IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 683
Query: 310 VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEA 369
V PD +F++LL ACSHAGL+ EG M + + P +HY C+VD+LGR ++EA
Sbjct: 684 VSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEA 743
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLS 429
+ ++ M EP + +W LL +CR H E + E+AA +L +LEP + V +SN++
Sbjct: 744 FEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQ 803
Query: 430 GSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL 489
G +N +R +MK S + K+PG SWIE++ +VH+F + K HP+ + I++KL E+ +L
Sbjct: 804 GRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863
Query: 490 -KGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRI 548
+ +GYV +T LH+++E K + L+ HSE++A+ + ++ +R+ +RI KN+R+
Sbjct: 864 EREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTP----DRACLRITKNLRV 919
Query: 549 CVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH F KL S L ++IV+RD+NRFHHF+ +CSC D W
Sbjct: 920 CRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 173/370 (46%), Gaps = 28/370 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ +A + C + Q QLH + FP+ D F+ L+ MY K G LDDA +
Sbjct: 80 VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKV 138
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFS-LASVLISC----DY 119
FDEMP R +W +I Y +G L+ ++ P S ++L +C D
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFR-NVISWNSMI 175
G +H+L +K + ++ NAL++MY+K+ D+ A ++F+ + + + + WNS++
Sbjct: 199 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKN--DDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
+++ + +ELF R++ G AP+ T L AC G +
Sbjct: 257 SSYSTSGKSLETLELF-------------REMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 236 SAVHSLIAKYGF-EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ + K + + NALI Y RCG + ++++ +M D+V+WNS++K Y
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 295 HGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQE--GNKVFHSMLENHGVVPQLDH 352
+ KEAL+ FS+M + VS+ S + +G + H+ + HG L
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 353 YACMVDLLGR 362
++D+ +
Sbjct: 424 GNTLIDMYSK 433
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 208/455 (45%), Gaps = 54/455 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L ACA +I+ +LH ++ + F+ N L++MYAK L AR LFD
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTG--FIVNALVSMYAKNDDLSAARRLFDG 242
Query: 68 M-PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH---- 121
K + V W +++S Y+ G + E LF + + PN +++ S L +CD
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 122 GKLVHALALKFSL-DAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAF 178
GK +HA LK S + +YV NALI MY++ C +A ++ M +V++WNS+I +
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTR-CGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ +A+E F+ M G D + + ++ A L +
Sbjct: 362 VQNLMYKEALEFFSDM-------------IAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ + K+G++ + + N LI Y++C + F +M DL+SW +++ YA +
Sbjct: 409 HAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCH 468
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACS-----------HAGLVQEGNKVFHSMLENH 344
EAL+LF ++ ++ D S+L A S H ++++G + ++++N
Sbjct: 469 VEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQNE 526
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG-ETRLAEL 403
+VD+ G+ + A ++ + + D V W+ ++ S +G E+ EL
Sbjct: 527 -----------LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGNESEAVEL 574
Query: 404 AATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
++ DS+ + + + + NK R I
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREI 609
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/560 (35%), Positives = 310/560 (55%), Gaps = 30/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DL V N L++MY K G ++ + +F+ M R+ +SWT +++ +AQ E + L
Sbjct: 401 DLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQ 460
Query: 101 -QYFFPNEFSLASVLISCDYLHG----KLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ + + S+L +C L K VH A++ L + + N LI++Y + C
Sbjct: 461 KEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGE-CGEF 518
Query: 154 DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
D + +F+ +E ++++SW SMI C + A+FLF ++Q+ +
Sbjct: 519 DHSLNLFQRVEKKDIVSWTSMI---NCCTNNGRL----------NGAVFLFTEMQKANIQ 565
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
PD +L A AGL + VH + + F + + ++L+ Y+ CGS++ + +V
Sbjct: 566 PDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRV 625
Query: 274 FDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
F++ D+V W +++ A +HG K+A+ LF M + PD +F++LL ACSH+ LV
Sbjct: 626 FERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLV 685
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG M+ + + P +HYAC+VD+LGR G+ EA + I+ MPM+P S +W LLG
Sbjct: 686 EEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLG 745
Query: 391 SCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+CR H LA +AA KL +LEP + ++ +SN++ G +N A+ R M +RK
Sbjct: 746 ACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKN 805
Query: 451 PGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG-MGYVPETSLALHDIEEEH 509
P SWIEI N +H F SG H EAI KL E+ L+ GYV +T LHD EE
Sbjct: 806 PACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEE 865
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
K + L+ HSE++A+ F +++ R IRI KN+R+C DCH F KL S L ++IVV
Sbjct: 866 KIDMLHKHSERIAIAFGLIST----RPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVV 921
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHF CSC D+W
Sbjct: 922 RDANRFHHFSGGSCSCEDFW 941
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 185/382 (48%), Gaps = 31/382 (8%)
Query: 23 QAMQLHEHMINNFP-NEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALIS 81
+ Q+H H + NE D F+ L+ MY + G +DDAR LF+ MP R V SW AL+
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 82 GYAQHGNAEECFRLF----CSLLQYFFPNEFSLASVLISC----DYLHGKLVHALALKFS 133
Y G+A E R++ S P+ +LASVL +C D G VH LA+K
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194
Query: 134 LDAHVYVANALINMYSK-SCADEAWKVFE--NMEFRNVISWNSMIAAFRACKLEAQAIEL 190
LD VANALI MY+K D A +VFE + R+V SWNS+++ C + +
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVS---GCVQNGRTL-- 249
Query: 191 FAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDD 250
EAL LFR +Q G + T VL+ CA L +H+ + K G E +
Sbjct: 250 --------EALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELN 301
Query: 251 TVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-- 308
+ NAL+ YA+ G + + +VF ++ D +SWNS+L Y + EA+ F M
Sbjct: 302 -IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQ 360
Query: 309 -NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRIL 367
QPD A VSL SA H + G + FH+ + L ++D+ + G I
Sbjct: 361 HGFQPDHACVVSLSSALGHLSRLNNGRE-FHAYAIKQRLHTDLQVGNTLMDMYIKCGSIE 419
Query: 368 EAEKLIREMPMEPDSVIWSVLL 389
+ K+ M + D + W+ +L
Sbjct: 420 CSAKVFESMGIR-DHISWTTIL 440
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 209/482 (43%), Gaps = 44/482 (9%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD-- 66
A++ AC G+ + ++H + + V N LI MYAK G LD A +F+
Sbjct: 168 ASVLKACGAEGDGRCGGEVHGLAVK--VGLDKSTLVANALIGMYAKCGLLDSALRVFEWL 225
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH---- 121
+ R+V SW +++SG Q+G E LF + FP N ++ +VL C L
Sbjct: 226 QQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSL 285
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
G+ +HA LK + ++ NAL+ MY+K D A +VF + ++ ISWNSM++ +
Sbjct: 286 GRELHAALLKCGSELNIQ-CNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQ 344
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
A+AI+ F +M + G PD + A L + H+
Sbjct: 345 NSFYAEAIDFFGEM-------------LQHGFQPDHACVVSLSSALGHLSRLNNGREFHA 391
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
K D + N L+ Y +CGSI S +VF+ M D +SW +IL +A + E
Sbjct: 392 YAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSE 451
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL++ + + DS S+L C + +V + N + L++ ++
Sbjct: 452 ALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENR--LI 509
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPGD 415
D+ G G + L + + + D V W+ ++ C +G A T++++ ++P D
Sbjct: 510 DIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQP-D 567
Query: 416 SLGFVQMSNIYCLSGSFNKAR-----LIRKEMK------GSRVRKYPGLSWIEIENRVHE 464
S+ V + S K + LIR+ S V Y G + RV E
Sbjct: 568 SVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFE 627
Query: 465 FA 466
A
Sbjct: 628 RA 629
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 141/281 (50%), Gaps = 25/281 (8%)
Query: 122 GKLVHALAL---KFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G+ VHA A+ + D ++A L+ MY + C D+A ++F M R V SWN+++
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGR-CGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A+ + +A+ ++ M R G APD CT + VLKAC R
Sbjct: 135 AYLSSGSAGEAMRVYGAM----------RASAAPGSAPDGCTLASVLKACGAEGDGRCGG 184
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD--KMTYHDLVSWNSILKAYAL 294
VH L K G + T++ANALI YA+CG + + +VF+ + D+ SWNS++
Sbjct: 185 EVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQ 244
Query: 295 HGQAKEALQLFSNMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+G+ EAL LF M +S T V++L C+ GL+ G ++ H+ L G +
Sbjct: 245 NGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGREL-HAALLKCGSELNIQ 303
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
A +V + + GR+ A ++ ++ E D + W+ +L SC
Sbjct: 304 CNALLV-MYAKYGRVDSALRVFGQIA-EKDYISWNSML-SC 341
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
++ A A ++ + Q+H +I NFP E V + L++MY+ G ++ A +F+
Sbjct: 573 SILVAIAGLSSLTKGKQVHGFLIRRNFPIEGP---VVSSLVDMYSGCGSMNYAIRVFERA 629
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLV 125
++VV WTA+I+ HG+ ++ LF +LQ P+ S ++L +C H KLV
Sbjct: 630 KCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACS--HSKLV 685
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/571 (34%), Positives = 324/571 (56%), Gaps = 38/571 (6%)
Query: 19 GNIKQAMQLHE-------HMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
G +K + LH+ H ++ +D V N +++ Y+K + + R+LF+EMP+
Sbjct: 249 GVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPEL 308
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSL-------LQYFFPNEFSLASVLISCDYLHGKL 124
+ VS+ +IS Y+Q EE LF + + F S+A+ L S G+
Sbjct: 309 DFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQV--GRQ 366
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
VH A+ + D+ ++V N+L++MY+K DEA +F+++ R+ +SW ++I+ + L
Sbjct: 367 VHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGL 426
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
++LF KM+ + D TF+ VLKA AG + +H+ I
Sbjct: 427 HGAGLKLFTKMRGAN-------------LRADQSTFATVLKASAGFASLLLGKQLHAFII 473
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G ++ + L+ YA+CGSI + QVF++M + VSWN+++ AYA +G + A+
Sbjct: 474 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIG 533
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M +QPDS + + +L ACSH G V++G + F +M +G+ P+ HYACM+DLL
Sbjct: 534 AFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLL 593
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGF 419
GR GR EAEKL+ EMP EPD ++WS +L +CR + LAE AA +L +E D+ +
Sbjct: 594 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAY 653
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V MSNIY +G + R ++K M+ ++K P SW+E+ +++H F+S + HP + I
Sbjct: 654 VSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIV 713
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
KK+ EL +++ GY P+TS + DI+E+ K E L +HSE+LA+ FA+++ C
Sbjct: 714 KKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCP---- 769
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
I +MKN+R C DCH +KL S ++ + I +
Sbjct: 770 IVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 187/394 (47%), Gaps = 40/394 (10%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
G + A+++++ M + ++ TN +I+ Y K G L ARHLFD MP R VV+WT
Sbjct: 57 RGQVSAALKVYDEMPH------KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWT 110
Query: 78 ALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGK----LVHALALKF 132
L+ YA + + +E F+LF + + P+ + ++L C+ + VHA A+K
Sbjct: 111 ILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKL 170
Query: 133 SLDAHVY--VANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
D +++ V N L+ Y + D A +FE + ++ +++N++I + L +AI
Sbjct: 171 GFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIH 230
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
LF KM+ + G P TFS VLKA GL +H L GF
Sbjct: 231 LFLKMR-------------QSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSR 277
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN-- 307
D + N ++H Y++ + ++ +F++M D VS+N ++ +Y+ Q +E+L LF
Sbjct: 278 DASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQ 337
Query: 308 -MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA----CMVDLLGR 362
M + F ++LS ++ +Q G +V +V D +VD+ +
Sbjct: 338 CMGFDRRNFPFATMLSIAANLSSLQVGRQV-----HCQAIVATADSILHVGNSLVDMYAK 392
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
EAE + + + + +V W+ L+ + G
Sbjct: 393 CEMFDEAELIFKSLS-QRSTVSWTALISGYVQKG 425
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 38/195 (19%)
Query: 238 VHSLIAKYGFEDD-------------------------------TVIANALIHAYARCGS 266
V + I K GF D TV N +I Y + G
Sbjct: 31 VDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGD 90
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSA 323
+S ++ +FD M +V+W ++ YA + EA +LF M PD TF +LL
Sbjct: 91 LSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPG 150
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG--RVGRILEAEKLIREMPMEPD 381
C+ A + Q H+ G L C V L V R+ A L E+ ++ D
Sbjct: 151 CNDA-VPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEI-LDKD 208
Query: 382 SVIWSVLLGSCRKHG 396
SV ++ L+ K G
Sbjct: 209 SVTFNTLITGYEKDG 223
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/556 (35%), Positives = 319/556 (57%), Gaps = 29/556 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQY 102
+ N L++MY+ +F M ++NVVSWTA+I+ Y + G+ ++ LF + L+
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEA 156
P+ F++ S L + HGK VH A++ ++ + VANAL+ MY K C +EA
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVK-CGYMEEA 240
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+F+++ ++ ISWN++I + L +A LF +M QL+ P+
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM---------LLQLR-----PNA 286
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T + +L A A L + +H+ + G+ +D +ANAL+ Y +CG++ L++++FD
Sbjct: 287 VTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDM 346
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
+T +L+SW ++ Y +HG+ ++A+ LF M +QPD+ +F ++L ACSH+GL EG
Sbjct: 347 LTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEG 406
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ F++M H + P+L HYACMVDLL G + EA + I MP+EPDS IW LL CR
Sbjct: 407 WRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCR 466
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H +LAE A + +LEP ++ +V ++NIY + + R ++ ++ G +R+ G
Sbjct: 467 IHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGC 526
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
SWIE+ + H F + + HPQ I + L+++ +++ G+ P+ AL ++ +E
Sbjct: 527 SWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEA 586
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HS KLA+ F ++N L + R IR+ KN R+C CH K S + G+EI++RDSN
Sbjct: 587 LCGHSSKLAVAFGVLN---LSQGRP-IRVTKNSRVCSHCHEAAKFISKMCGREIILRDSN 642
Query: 574 RFHHFKDRICSCNDYW 589
RFHHF++ CSC YW
Sbjct: 643 RFHHFEEGRCSCRGYW 658
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 195/369 (52%), Gaps = 29/369 (7%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQY 102
V N LI+ YAK ++DA +FDEMP+R+++SW ++I G A +G ++ LF + L+
Sbjct: 21 VCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEG 80
Query: 103 FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADEAW- 157
+ +L SV+ +C H G +VH +++ L + + NAL++MYS +C+D W
Sbjct: 81 QELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYS-NCSD--WR 137
Query: 158 ---KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
K+F NME +NV+SW +MI + + + + ++ LF+++ EG+ P
Sbjct: 138 STNKIFRNMEQKNVVSWTAMITS-------------YTRAGHFDKVAGLFQEMGLEGIRP 184
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D + L A AG + +H +VH + G E+ +ANAL+ Y +CG + ++ +F
Sbjct: 185 DVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIF 244
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ--PDSATFVSLLSACSHAGLVQE 332
D +T D +SWN+++ Y+ A EA LF+ M +Q P++ T +L A + ++
Sbjct: 245 DHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLER 304
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G ++ H+ G + +VD+ + G +L A +L +M + + W++++
Sbjct: 305 GREM-HAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLF-DMLTNKNLISWTIMIAGY 362
Query: 393 RKHGETRLA 401
HG R A
Sbjct: 363 GMHGRGRDA 371
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 26/302 (8%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF 178
+ G +VH +K+ A V NALI+ Y+KS ++A VF+ M R++ISWNS+I
Sbjct: 1 MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ L +A+ELF +M EG D T V+ AC V
Sbjct: 61 ASNGLYDKAVELFVRM-------------WLEGQELDSTTLLSVMPACVQSHYSFIGGVV 107
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H + G +T + NAL+ Y+ C + ++F M ++VSW +++ +Y G
Sbjct: 108 HGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHF 167
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+ LF M ++PD S L A + ++ G V H +G+ L
Sbjct: 168 DKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSV-HGYAIRNGIEEVLPVANA 226
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT----KLKQL 411
++++ + G + EA + I + + D++ W+ L+G + + LA A T L QL
Sbjct: 227 LMEMYVKCGYMEEA-RFIFDHVTKKDTISWNTLIGG---YSRSNLANEAFTLFNEMLLQL 282
Query: 412 EP 413
P
Sbjct: 283 RP 284
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/611 (34%), Positives = 329/611 (53%), Gaps = 80/611 (13%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ ACA ++K LH ++ D F+ + LI+MYAK G L AR +F+
Sbjct: 277 YGSVLSACASISDLKWGAHLHARILR--MEHSLDAFLGSGLIDMYAKCGCLALARRVFNS 334
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLH----G 122
+ ++N VSWT LISG AQ G ++ LF + Q +EF+LA++L C + G
Sbjct: 335 LGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATG 394
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
+L+H A+K +D+ V V NA+I MY++ C D +A F +M R+ ISW +MI AF
Sbjct: 395 ELLHGYAIKSGMDSFVPVGNAIITMYAR-CGDTEKASLAFRSMPLRDTISWTAMITAFSQ 453
Query: 181 CKLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPDWCTFSIV 222
+A + F M EE + L+ ++ + + PDW TF+
Sbjct: 454 NGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATS 513
Query: 223 LKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDL 282
++ACA L T + + V S + K+G D +AN+++ Y+RCG I +++VFD + +L
Sbjct: 514 IRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNL 573
Query: 283 VSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHS 339
+SWN+++ A+A +G +A++ + +M +PD ++V++LS
Sbjct: 574 ISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS----------------- 616
Query: 340 MLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETR 399
DLLGR G + +A+ LI MP +P++ +W LLG+CR H ++
Sbjct: 617 ------------------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSI 658
Query: 400 LAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIE 459
LAE AA KL +L DS G+V ++NIY SG +RK MK +RK PG SWIE++
Sbjct: 659 LAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVD 718
Query: 460 NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG-YVPETSLALHDIEEEHKEEQLYHHS 518
NRVH F HPQ ++ KLEE++ +++ G YV S A H+ ++ +HS
Sbjct: 719 NRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSCA-------HRSQK--YHS 769
Query: 519 EKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF 578
EKLA F +++ I++ KN+R+C DCH +KL S + +E+++RD RFHHF
Sbjct: 770 EKLAFAFGLLSLPPWMP----IQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDGFRFHHF 825
Query: 579 KDRICSCNDYW 589
KD CSC DYW
Sbjct: 826 KDGFCSCRDYW 836
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 203/460 (44%), Gaps = 88/460 (19%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMI----------------------------NNFPN-E 38
Y AC + + A+QLH H+I F N E
Sbjct: 145 YTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIE 204
Query: 39 PQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
LF N +I Y++ +A H+F MP+R+ VSW LIS ++Q+G+ C F
Sbjct: 205 SPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVE 264
Query: 99 LLQYFF-PNEFSLASVLISC----DYLHGKLVHA--LALKFSLDAHVYVANALINMYSK- 150
+ F PN + SVL +C D G +HA L ++ SLDA ++ + LI+MY+K
Sbjct: 265 MCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDA--FLGSGLIDMYAKC 322
Query: 151 SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
C A +VF ++ +N +SW +I+ A+ ++AL LF Q+++
Sbjct: 323 GCLALARRVFNSLGEQNQVSWTCLISG-------------VAQFGLRDDALALFNQMRQA 369
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC------ 264
+ D T + +L C+G +H K G + + NA+I YARC
Sbjct: 370 SVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKA 429
Query: 265 -------------------------GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
G I ++Q FD M ++++WNS+L Y HG ++
Sbjct: 430 SLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSE 489
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
E ++L+ M V+PD TF + + AC+ ++ G +V S + G+ + +
Sbjct: 490 EGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVV-SHVTKFGLSSDVSVANSI 548
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
V + R G+I EA K+ + ++ + + W+ ++ + ++G
Sbjct: 549 VTMYSRCGQIKEARKVFDSIHVK-NLISWNAMMAAFAQNG 587
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 201/460 (43%), Gaps = 76/460 (16%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA---- 61
Q+ + A L G+ A +LH +I LF+ N+L++MY+ G +DDA
Sbjct: 5 QLSQKFYDAFKLCGSPPIARKLHAQLI--LSGLDASLFLLNNLLHMYSNCGMVDDAFRVF 62
Query: 62 ---------------------------RHLFDEMPK--RNVVSWTALISGYAQHGNAEEC 92
+LFDEMP R+ VSWT +ISGY Q+G
Sbjct: 63 REANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHS 122
Query: 93 FRLFCSLLQ---YFFPN--EFSLASVLISCDYLHGKL----VHALALKFSLDAHVYVANA 143
+ F S+L+ + N FS + +C L +HA +K L A + N+
Sbjct: 123 IKTFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNS 182
Query: 144 LINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---- 198
L++MY K A A VF N+E ++ WNSMI + +A+ +F +M +
Sbjct: 183 LVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSW 242
Query: 199 --------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
L F ++ G P++ T+ VL ACA + + + +H+ I +
Sbjct: 243 NTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILR 302
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
D + + LI YA+CG ++L+++VF+ + + VSW ++ A G +AL L
Sbjct: 303 MEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALAL 362
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA----CMV 357
F+ M +V D T ++L CS G +L + + +D + ++
Sbjct: 363 FNQMRQASVVLDEFTLATILGVCSGQNYAATGE-----LLHGYAIKSGMDSFVPVGNAII 417
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ R G +A R MP+ D++ W+ ++ + ++G+
Sbjct: 418 TMYARCGDTEKASLAFRSMPLR-DTISWTAMITAFSQNGD 456
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/554 (37%), Positives = 306/554 (55%), Gaps = 36/554 (6%)
Query: 53 AKFGYLDDARHLFDEMP-KRNVVSWTALISGYAQHGN-----AEECFRLFCSLLQY-FFP 105
A +L AR +FD +P + V + L+ GYA+ N A R+F +L+ P
Sbjct: 72 AGPAHLAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAP 131
Query: 106 NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCADE--AWKV 159
+ ++ S+L +C G+ HALA+K H YV LINMY++ C D A +
Sbjct: 132 DTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAE-CGDARAARVM 190
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F + V+S+N+MIAA + EAL LFR++Q +G+ P T
Sbjct: 191 FGGTDGGCVVSYNAMIAAA-------------VRSSRPGEALVLFREMQGKGLKPTSVTV 237
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
VL ACA L VH + K G ++ ALI YA+CGS+ + VF M
Sbjct: 238 ISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMES 297
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
D +W+ ++ AYA HG +EA+ LF M ++PD TF+ +L ACSH+GLV EG +
Sbjct: 298 KDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQY 357
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F M ++HG+VP + HY C+ DLL R G++ A K I E+P+ P ++W LL +C HG
Sbjct: 358 FDDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHG 416
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ L + ++ +L+ +V SN+ +G + + ++RK M V K PG S I
Sbjct: 417 DFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSI 476
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALH-DIEEEHKEEQLY 515
EI+N VHEF +G RHP+ + K ++E+I QLK +GYVP TS H ++ EE K L
Sbjct: 477 EIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAISLK 536
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
+HSEKLA+ F ++N + +R++KN+R+C DCH+ KL S + + I++RD NRF
Sbjct: 537 YHSEKLAIAFGLLNTAP----GATLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRF 592
Query: 576 HHFKDRICSCNDYW 589
HHF++ ICSC DYW
Sbjct: 593 HHFEEGICSCGDYW 606
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 170/414 (41%), Gaps = 80/414 (19%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T + +L ACA ++ Q H + + +V LINMYA+ G AR +
Sbjct: 133 TYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHD--YVRPTLINMYAECGDARAARVM 190
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLH-- 121
F VVS+ A+I+ + E LF + + P ++ SVL +C L
Sbjct: 191 FGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGAL 250
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAF 178
G+ VH K L + V V+ ALI+MY+K + ++A VF+ ME ++ +W+ MI A
Sbjct: 251 ELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVA- 309
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+A EA+ LF ++++EGM PD TF VL AC+
Sbjct: 310 ------------YANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACS----------- 346
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS----WNSILKAYAL 294
HS G +S Q FD M H +V + + A
Sbjct: 347 HS------------------------GLVSEGLQYFDDMKDHGIVPGIKHYGCVTDLLAR 382
Query: 295 HGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSML---ENHGVVPQLD 351
GQ + A + + + P + +LLSAC G + G +VF +L ++HG
Sbjct: 383 SGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHG-----G 437
Query: 352 HYACMVDLLGRVG--------RILEAEKLIREMP----MEPDSVIWSVLLGSCR 393
Y +L G R L +EK + ++P +E D+ + G R
Sbjct: 438 DYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGR 491
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/604 (35%), Positives = 318/604 (52%), Gaps = 41/604 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTA 78
++ Q Q+H ++ + Q+ + LI+ Y L AR +FD+ P + W
Sbjct: 67 SLTQIKQIHAQVVTH--GLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNL 124
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFP---NEFSLASVLISCDY-----LHGKLVHALAL 130
+I Y++ +++E LF +L + P ++++ V +C +G+ VH + +
Sbjct: 125 MIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVV 184
Query: 131 KFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
K ++ ++V N+L+NMYS S +A +VF+ M R+VI+W S++ + +A E
Sbjct: 185 KDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARE 244
Query: 190 LFAKMKNEE------------------EALFLFRQ-LQREGMAPDWCTFSIVLKACAGLV 230
LF M EAL F L + + P+ +L ACA L
Sbjct: 245 LFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLG 304
Query: 231 TERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+H I K + I+ ALI YA+CG I +++VFD + DL++W S++
Sbjct: 305 ALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMIS 364
Query: 291 AYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
++HG E L FS M +PD T + +L+ CSH+GLV+EG +FH M+ G+V
Sbjct: 365 GLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIV 424
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
P+L+HY C++DLLGR GR+ A + I+ MPMEPD V W LL +CR HG+ L E
Sbjct: 425 PKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINH 484
Query: 408 LKQLEPGD-SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
+ +L PG G+V +SN+Y G + +RK M PG SWIEI+ VHEF
Sbjct: 485 IAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFL 544
Query: 467 SGGKRHPQREAIFKKLEELIGQLK-GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
+ K HP+ I KKL E++ ++ GYVP T L D+ EE KE+ + HSEKLA+ F
Sbjct: 545 AADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAF 604
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
G L + IRI KN+R C DCH+ MK S + +EIVVRD +RFH F+ CSC
Sbjct: 605 -----GLLSTQEGTIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSC 659
Query: 586 NDYW 589
DYW
Sbjct: 660 TDYW 663
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/544 (37%), Positives = 303/544 (55%), Gaps = 33/544 (6%)
Query: 74 VSWTALISGYAQHGNAE-ECFRLFCSLLQYFFPNEFSLASVLISC----DYLHGKLVHAL 128
V W ALISG+ + G E C + + SVL +C D L G VH
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 129 ALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQ 186
L+ + V NAL++MY++ C D AW +FE M+ R++ SW S+I+ +
Sbjct: 187 VLESGVLPDQRVENALVDMYAE-CGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDR 245
Query: 187 AIELFAKMKNEE------------------EALFLFRQLQREGMAPDWCTFSIVLKACAG 228
A +LF M + +AL FR +Q + D T V+ ACA
Sbjct: 246 ARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQ 305
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
L + + G + D + NALI Y++CGSI + VF M D +W +I
Sbjct: 306 LGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAI 365
Query: 289 LKAYALHGQAKEALQLFSNM--NVQ-PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+ A++G+ +EA+ +F M +Q PD TFV +L+AC+HAGLV +G + F SM E +
Sbjct: 366 ILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYN 425
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ P + HY C++D+LGR G++ EA I +MPM+P+S IW LL SCR +G + + ELAA
Sbjct: 426 ISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAA 485
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
+L +L+P +S ++ +SN+Y S + R IR+ + ++K PG S IE+ +HEF
Sbjct: 486 ERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEF 545
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
+ + HP + I+ KLE ++ L+ GYVP+ + L ++ EE K++ LY HSEKLA+ F
Sbjct: 546 VAADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTF 605
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
A++ S +IRI+KN+R+C+DCHN +KL S L G+E++VRD RFHHF+ CSC
Sbjct: 606 ALLTSES----NVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSC 661
Query: 586 NDYW 589
DYW
Sbjct: 662 KDYW 665
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 160/362 (44%), Gaps = 69/362 (19%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYA------------ 53
Y ++ AC ++ MQ+H+ ++ + P++ V N L++MYA
Sbjct: 164 YVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQR----VENALVDMYAECGDMDAAWVLF 219
Query: 54 -------------------KFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG---NAEE 91
+ G +D AR LFD MP+R+ ++WTA+I GY Q G +A E
Sbjct: 220 EGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALE 279
Query: 92 CFRL--FCSLLQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALI 145
FR C + +EF++ SV+ +C L G+ + + V+V NALI
Sbjct: 280 TFRYMQICKVR----ADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALI 335
Query: 146 NMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
+MYSK + E A VF++M R+ +W ++I +AI++F +M
Sbjct: 336 DMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRM---------L 386
Query: 205 RQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
R LQ PD TF VL AC AGLV ++ S+ Y V LI
Sbjct: 387 RALQ----TPDEVTFVGVLTACTHAGLV-DKGREFFLSMTEAYNISPTVVHYGCLIDVLG 441
Query: 263 RCGSISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKEA-LQLFSNMNVQPDSATFVSL 320
R G + + DKM + W ++L + ++G ++ L + + PD++T L
Sbjct: 442 RAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYIL 501
Query: 321 LS 322
LS
Sbjct: 502 LS 503
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 172/433 (39%), Gaps = 77/433 (17%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVL-- 114
L AR L D +P R + ++ +SG HG AEE + +L P+ ++ S+L
Sbjct: 5 LSRARSLLDGIPHRRGRAASSSVSG---HG-AEEAVAGYVRMLAGGARPDAYTFPSLLKA 60
Query: 115 -------ISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRN 167
G +HA +KF ++++ + A++LI MY+ A +
Sbjct: 61 AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLA 120
Query: 168 V-----ISWNSMIAAF-RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
+ WN++I+ R+ + E F + R T+
Sbjct: 121 TGGGAPVMWNALISGHNRSGRFELSCCS--------------FVDMVRASAMATAVTYVS 166
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGS--------------- 266
VL AC VH + + G D + NAL+ YA CG
Sbjct: 167 VLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRS 226
Query: 267 ----------------ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN- 309
+ ++ +FD M D ++W +++ Y G+ ++AL+ F M
Sbjct: 227 MASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQI 286
Query: 310 --VQPDSATFVSLLSACSHAGLVQEGN--KVFHSMLENHGVVPQLDHYACMVDLLGRVGR 365
V+ D T VS+++AC+ G ++ G +++ L G+ + ++D+ + G
Sbjct: 287 CKVRADEFTMVSVVTACAQLGALETGEWARIYMGRL---GIKMDVFVGNALIDMYSKCGS 343
Query: 366 ILEAEKLIREMPMEPDSVIWS-VLLG-SCRKHGETRLAELAATKLKQLEPGDSLGFVQMS 423
I A + ++M D W+ ++LG + GE + ++ L+ L+ D + FV +
Sbjct: 344 IERALDVFKDMH-NRDKFTWTAIILGLAVNGRGEEAI-DMFYRMLRALQTPDEVTFVGVL 401
Query: 424 NIYCLSGSFNKAR 436
+G +K R
Sbjct: 402 TACTHAGLVDKGR 414
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 209/582 (35%), Positives = 318/582 (54%), Gaps = 47/582 (8%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
Q+H H I + + V + NMY K G+L+ A +F++M ++N V+WT ++ GY Q
Sbjct: 132 QIHSHAIRS--GLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQ 189
Query: 86 HGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYV 140
+ LF ++ +E+ + VL +C L G+ +H +K L++ V V
Sbjct: 190 AERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSV 249
Query: 141 ANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
L++ Y K S + A K FE + N +SW+++I + +M EE
Sbjct: 250 GTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGY-------------CQMGEFEE 296
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLV-----TERHASAVHSLIAKYGFEDDTVIA 254
AL F L+ + + T++ + +AC+ L + HA A+ S + Y +
Sbjct: 297 ALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGE----- 351
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
+A+I Y+RCG + + +VF+ + D V+W +I+ YA G A EAL+LF M V+
Sbjct: 352 SAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVR 411
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P++ TF+++L+ACSH+GLV EG + SM N+GV +DHY CMVD+ R G + EA +
Sbjct: 412 PNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALE 471
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
LIR MP PD++ W LLG C + + ELAA L QL+P D+ G++ M N+Y G
Sbjct: 472 LIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGK 531
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEEL----IG 487
+ +A +RK M +RK SWI ++ +VH F G K HPQ E I+ KLE L I
Sbjct: 532 WKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIK 591
Query: 488 QLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIR 547
+ G+ + S +L + ++EQL HSE+LAL F +++ S + + + KN+R
Sbjct: 592 EETGLLTEEDVSNSLPE-----RKEQLLVHSERLALAFGLISTPS----SAPVVVFKNLR 642
Query: 548 ICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
C DCH+F K S + G+EIVVRDS RFHHFK CSCNDYW
Sbjct: 643 ACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 202/403 (50%), Gaps = 28/403 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S + Y LF AC ++ HE M N P+ F+ N ++ MY K G L DAR
Sbjct: 9 SPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPE--FLENSVLKMYCKCGSLADARK 66
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFS----LASVLISCD 118
+FDEM +RN+VSW +IS YA++G ++ F +F ++L+ PN + L S+L
Sbjct: 67 VFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSG 126
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
GK +H+ A++ L ++ V A+ NMY K C + A VFE M +N ++W ++
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVK-CGWLEGAELVFEKMSEKNAVAWTGIMV 185
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ + + A+ LFAKM N EG+ D FSIVLKACAGL
Sbjct: 186 GYTQAERQMDALALFAKMVN-------------EGVELDEYVFSIVLKACAGLEELNFGR 232
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H I K G E + + L+ Y +C ++ + + F+ ++ + VSW++++ Y G
Sbjct: 233 QIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMG 292
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+ +EAL+ F ++ +V +S T+ S+ ACS G + +++ V Q
Sbjct: 293 EFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGES 352
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
A M+ + R GR+ A ++ + +PD+V W+ ++ G
Sbjct: 353 A-MITMYSRCGRLDYATRVFESID-DPDAVAWTAIIAGYAYQG 393
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/618 (32%), Positives = 340/618 (55%), Gaps = 52/618 (8%)
Query: 11 LFHACALHGNIK--QAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL---- 64
L +C+ ++K L H+I+ D+FV + L+ + + +L
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLIS-------DVFVASRLLALCVDDSTFNKPTNLLGYA 70
Query: 65 ---FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSL-----ASVLI 115
F ++ N+ + LI ++ + F + +L+ +P+ + AS +
Sbjct: 71 YGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 116 SCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNS 173
C L G+ H+ ++F VYV N+L++MY+ +C A ++F M FR+V+SW S
Sbjct: 131 EC-VLVGEQTHSQIVRFGFQNDVYVENSLVHMYA-NCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 174 MIAAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAPD 215
M+A + C + A E+F +M + E+A+ LF ++REG+ +
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
V+ +CA L + + K + ++ AL+ + RCG I + VF+
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+ D +SW+SI+K A+HG A +A+ FS M P TF ++LSACSH GLV++
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
G +++ +M ++HG+ P+L+HY C+VD+LGR G++ EAE I +M ++P++ I LLG+C
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGAC 428
Query: 393 RKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPG 452
+ + T +AE L +++P S +V +SNIY +G ++K +R MK V+K PG
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
Query: 453 LSWIEIENRVHEFASG-GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
S IEI+ ++++F G ++HP+ I +K EE++G+++ +GY T A D++EE KE
Sbjct: 489 WSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKE 548
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
++ HSEKLA+ + +M + + IRI+KN+R+C DCH KL S++ G+E++VRD
Sbjct: 549 SSIHMHSEKLAIAYGMMKT----KPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRD 604
Query: 572 SNRFHHFKDRICSCNDYW 589
NRFHHF++ +CSC DYW
Sbjct: 605 RNRFHHFRNGVCSCRDYW 622
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/623 (33%), Positives = 341/623 (54%), Gaps = 50/623 (8%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+LH Q+ CA + + A LH H++ Q + N L+N+Y K G
Sbjct: 6 YLHQLQL-------CARNRTLTTAKALHAHIVK--LGIVQCCPLANTLVNVYGKCGAASH 56
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISCD 118
A +FDEMP R+ ++W ++++ Q + + +F S+ P++F ++++ +C
Sbjct: 57 ALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACA 116
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
L HG+ VH + V ++L++MY+K + A VF+++ +N ISW +
Sbjct: 117 NLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTA 176
Query: 174 MIAAFRACKLEAQAIELFAKMKNEE------------------EALFLFRQLQREGMAP- 214
M++ + + +A+ELF + + EA +F +++RE +
Sbjct: 177 MVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDIL 236
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D S ++ ACA L VH L+ GF+ I+NALI YA+C + +K +F
Sbjct: 237 DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIF 296
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+M + D+VSW S++ A HGQA++AL L+ +M V+P+ TFV L+ ACSH G V+
Sbjct: 297 SRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G ++F SM +++G+ P L HY C++DLLGR G + EAE LI MP PD W+ LL +
Sbjct: 357 KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416
Query: 392 CRKHGE----TRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
C++ G R+A+ + K +P ++ +SNIY + + K R+++ V
Sbjct: 417 CKRQGRGQMGIRIADHLVSSFKLKDPST---YILLSNIYASASLWGKVSEARRKLGEMEV 473
Query: 448 RKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK-GMGYVPETSLALHDIE 506
RK PG S +E+ F +G HP +E IF+ L++L +++ GYVP+TS LHD++
Sbjct: 474 RKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMD 533
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
E+ KE+ L+ HSE+ A+ + ++ + IRI+KN+R+C DCH +K S++ +E
Sbjct: 534 EQEKEKLLFWHSERSAVAYGLLK----AVPGTPIRIVKNLRVCGDCHVVLKHISEITERE 589
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+VRD+ R+HHFK CSCND+W
Sbjct: 590 IIVRDATRYHHFKGGKCSCNDFW 612
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/531 (38%), Positives = 315/531 (59%), Gaps = 30/531 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D +N L+NMY+K G ++ AR LFDEMP R++VSW ++ + Q+G++E+ LF +
Sbjct: 81 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQ 140
Query: 101 QYFFP-NEFSLASVLISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSK-SCAD 154
+ +EF+++SV+ +C K +H ALK +LD++V+V AL+++Y+K
Sbjct: 141 KEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 200
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQREGM 212
+A VFE M R+ ++W+SM+A + ++NE EEAL LF + Q G+
Sbjct: 201 DASLVFECMPERSDVTWSSMVAGY---------------VQNELYEEALVLFHRAQAMGL 245
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
+ T S L ACA V +++ K G + + ++LI YA+CG I +
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYI 305
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLF---SNMNVQPDSATFVSLLSACSHAGL 329
VF + ++V WN++L ++ H ++ EA+ F M + P+ T++S+L+ACSH GL
Sbjct: 306 VFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGL 365
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V++G K F M+ H V P + HY+CMVD+LGR G + EA+ LI MP + + +W LL
Sbjct: 366 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLL 425
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
SCR + AE+AA L ++EP ++ V +SNIY + + + R +K S+ +K
Sbjct: 426 ASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKAKK 485
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWIEI+++VH F G + HP+ I+ KLE+L+G++K +GY +T LHD+EE
Sbjct: 486 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 545
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLAS 560
K+E L HHSEKLAL F IM + + IRIMKN+RIC DCH+FMKLAS
Sbjct: 546 KQELLRHHSEKLALTFGIM----VLPHGAPIRIMKNLRICGDCHSFMKLAS 592
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 145/296 (48%), Gaps = 19/296 (6%)
Query: 120 LHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
+ G HA ++ L A +N L+NMYSK + A K+F+ M R+++SWN+M+ +
Sbjct: 64 IEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGS- 122
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ + E+AL LF Q+Q+EG++ T S V+ ACA +
Sbjct: 123 ------------HTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQL 170
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H K + + + AL+ YA+CG + + VF+ M V+W+S++ Y +
Sbjct: 171 HGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELY 230
Query: 299 KEALQLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL LF M ++ + T S LSAC+ + EG +V ++L G+ + +
Sbjct: 231 EEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQV-QAVLCKTGIGSNIFVISS 289
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
++D+ + G I+E ++ E + V+W+ +L +H + A + K++Q+
Sbjct: 290 LIDMYAKCG-IIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQM 344
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/563 (35%), Positives = 323/563 (57%), Gaps = 32/563 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ-HGNAEECFRLFCSL 99
D V+N L+ MY + G + + +F+ M +VVSW +++ A E ++F ++
Sbjct: 518 DTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNM 577
Query: 100 LQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC-A 153
++ PN+ + + L + L GK +H++ LK + V NAL++ Y+KS
Sbjct: 578 MKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDV 637
Query: 154 DEAWKVFENMEFR-NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
D ++F M R + ISWNSMI+ + +A++ M + E+ +
Sbjct: 638 DSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMM----------- 686
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D CTFSIVL ACA + +H+ + E D V+ +AL+ Y++CG I + +
Sbjct: 687 --DHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASK 744
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VF M+ + SWNS++ YA HG ++AL++F M PD TFVS+LSACSHAGL
Sbjct: 745 VFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGL 804
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+ G F ++E++G++P+++HY+C++DLLGR G + + ++ ++ MPM+P+++IW +L
Sbjct: 805 VERGLDYFE-LMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVL 863
Query: 390 GSCRK---HGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
+C++ + L A+ L +LEP + + +V S + G + R MKG+
Sbjct: 864 VACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAA 923
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
V+K G SW+ + + VH F +G + HP + I++KL LI +++ GYVP T LHD+E
Sbjct: 924 VKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLE 983
Query: 507 EEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
EE+KEE L +HSEKLA+ F + S IRIMKN+R+C DCH + S ++G++
Sbjct: 984 EENKEELLRYHSEKLAVAFVLTRSSS----GGPIRIMKNLRVCGDCHTAFRYISQIVGRQ 1039
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I++RDS RFHHFKD CSC DYW
Sbjct: 1040 IILRDSIRFHHFKDGKCSCGDYW 1062
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 42/371 (11%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
DL+V + L++ +A+ G LD+A+ ++ + +RN V+ LI+G + + E +F
Sbjct: 311 SDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGA 370
Query: 100 LQYFFPN------------EFSLASVLISCDYLHGKLVHALALKFSLDAHVY----VANA 143
N EFS A + G+ VHA L+ H+Y V+N
Sbjct: 371 RDSAAVNVDTYVVLLSAIAEFSTAEQGLR----KGREVHAHVLR---AGHIYRKIAVSNG 423
Query: 144 LINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
L+NMY+K A D+A +VF+ ME R+ ISWN++I A + E A+
Sbjct: 424 LVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALD-------------QNGYCEAAMM 470
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
+ +++ + P L +CAGL +H K+G DT ++NAL+ Y
Sbjct: 471 NYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYG 530
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYA-LHGQAKEALQLFSNM---NVQPDSATFV 318
CG +S ++F+ M+ HD+VSWNSI+ A E++Q+FSNM + P+ TFV
Sbjct: 531 ECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFV 590
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+ L+A + +++ G ++ HS++ HGV ++ + G + E+L M
Sbjct: 591 NFLAALTPLSVLELGKQI-HSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSG 649
Query: 379 EPDSVIWSVLL 389
D++ W+ ++
Sbjct: 650 RRDAISWNSMI 660
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 197/418 (47%), Gaps = 48/418 (11%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
DLF+ NHL+N YAK LD AR +FD MP RN VSWT LISG+ G E+ F LF ++L
Sbjct: 99 DLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAML 158
Query: 101 QY---FFPNEFSLASVLISC-DYLHGKL-----VHALALKFSLDAHVYVANALINMYSKS 151
+ P F+ SVL +C D +L VH L K ++ V NALI+MY
Sbjct: 159 REGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSC 218
Query: 152 CADE---AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
A +VF+ R++I+WN++++ ++AK + LFR +Q
Sbjct: 219 SVGPPILAQRVFDTTPVRDLITWNALMS-------------VYAKRGDAICTFTLFRAMQ 265
Query: 209 REG----MAPDWCTF-----SIVLKACA-GLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+ + P TF + L +C+ GL+ + + + K G D + +AL+
Sbjct: 266 YDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQ-----LFVRVLKSGCSSDLYVGSALV 320
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA--LHGQAKEALQLFSNMNVQPDSAT 316
A+AR G + +K ++ + + V+ N ++ HG+A + + + + + T
Sbjct: 321 SAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDT 380
Query: 317 FVSLLSACSHAGLVQE----GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+V LLSA + ++ G +V +L + ++ +V++ + G I +A ++
Sbjct: 381 YVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRV 440
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+ M D + W+ ++ + ++G A + ++Q G S F +S + +G
Sbjct: 441 FQLMEAR-DRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPS-NFAAISGLSSCAG 496
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H +K L +++AN L+N Y+K D A +VF+ M RN +SW +I+ L
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMA--PDWCTFSIVLKACAGLVTER--HASAVH 239
E+A LFR + REG P TF VL+AC +R A VH
Sbjct: 147 -------------PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVH 193
Query: 240 SLIAKYGFEDDTVIANALIHAYARC--GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
L++K F +T + NALI Y C G L+++VFD DL++WN+++ YA G
Sbjct: 194 GLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGD 253
Query: 298 AKEALQLF-------SNMNVQPDSATFVSL-----LSACSHAGLVQEGNKVFHSMLENHG 345
A LF S + ++P TF SL LS+CS L Q +V S G
Sbjct: 254 AICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKS-----G 308
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK--HGE 397
L + +V R G + EA+ + + E ++V + L+ K HGE
Sbjct: 309 CSSDLYVGSALVSAFARHGMLDEAKDIYLGLK-ERNAVTLNGLIAGLVKQQHGE 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
++H + K G D +AN L+++YA+ + +++VFD M + VSW ++ + L G
Sbjct: 86 SLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSG 145
Query: 297 QAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
++A LF M +P S TF S+L AC +G + G V + HG+V + +
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAV-----QVHGLVSKTE 200
Query: 352 HYA------CMVDLLG--RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
+ ++ + G VG + A+++ P+ D + W+ L+ K G+
Sbjct: 201 FTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVR-DLITWNALMSVYAKRGD 253
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/536 (37%), Positives = 312/536 (58%), Gaps = 31/536 (5%)
Query: 35 FPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F P +D+ LI YA GY+++A+ +FDE+P ++VVSW A+ISGYA+ GN +E
Sbjct: 149 FDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEAL 208
Query: 94 RLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMY 148
LF +++ P+E ++ +V+ +C G+ VH+ +++ + NALI++Y
Sbjct: 209 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLY 268
Query: 149 SKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
SK C + A +FE + +++VISWN++I + M +EAL LF++
Sbjct: 269 SK-CGELETACGLFEGLPYKDVISWNTLIGGY-------------THMNLYKEALLLFQE 314
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARC 264
+ R G P+ T +L ACA L +H I K G + + + +LI YA+C
Sbjct: 315 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKC 374
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
G I + QVF+ + + L SWN+++ +A+HG+A + +FS M ++PD TFV LL
Sbjct: 375 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLL 434
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
SACSH+G++ G +F SM +++ + P+L+HY CM+DLLG G EAE++I M MEPD
Sbjct: 435 SACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPD 494
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
VIW LL +C+ HG L E A L ++EP + +V +SNIY +G +N+ R
Sbjct: 495 GVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRAL 554
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
+ ++K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS
Sbjct: 555 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEV 614
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMK 557
L ++EEE KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH K
Sbjct: 615 LQEMEEEWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEAYK 666
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 195/419 (46%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F+ + + N++ W + G+A + +L+ C + PN ++ +
Sbjct: 38 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFL 97
Query: 114 LISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D +YV +LI+MY ++ ++A KVF+ R+V
Sbjct: 98 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDV 157
Query: 169 ISWNSMIAAF--RACKLEAQA----------------IELFAKMKNEEEALFLFRQLQRE 210
+S+ ++I + R AQ I +A+ N +EAL LF+ + +
Sbjct: 158 VSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 217
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ ACA + VHS I +GF + I NALI Y++CG + +
Sbjct: 218 NVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETA 277
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F+ + Y D++SWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 278 CGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 337
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ GV ++D+ + G I A ++ + + W
Sbjct: 338 GAIDIG-RWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSW 395
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG + +++++ +EP D + FV + + SG + R I + M
Sbjct: 396 NAMIFGFAMHGRADASFDIFSRMRKNGIEP-DDITFVGLLSACSHSGMLDLGRHIFRSM 453
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 53/307 (17%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCADE----AWKVFENMEFRNVISWNSMIAAF 178
+++HA +K L Y + LI S + A VFE ++ N++ WN+M F
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM---F 63
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
R L + + AL L+ + G+ P+ TF +LK+CA + +
Sbjct: 64 RGHALSSDPVS----------ALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 113
Query: 239 HSLIAKYG--------------------FED-----------DTVIANALIHAYARCGSI 267
H + K G ED D V ALI YA G I
Sbjct: 114 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYI 173
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
++++FD++ D+VSWN+++ YA G KEAL+LF +M NV+PD +T V+++SAC
Sbjct: 174 ENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 233
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
+ +G ++ G +V HS +++HG L ++DL + G + A L +P + D +
Sbjct: 234 AQSGSIELGRQV-HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK-DVIS 291
Query: 385 WSVLLGS 391
W+ L+G
Sbjct: 292 WNTLIGG 298
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 181/413 (43%), Gaps = 91/413 (22%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
T+ ACA G+I+ Q+H + ++ +L + N LI++Y+K G L+ A LF+ +P
Sbjct: 228 TVVSACAQSGSIELGRQVHSWIDDH--GFGSNLKIVNALIDLYSKCGELETACGLFEGLP 285
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF-FPNEFSLASVLISCDYLHGKLVHAL 128
++V+SW LI GY +E LF +L+ PN+ ++ S+L +C H
Sbjct: 286 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC-------AHLG 338
Query: 129 ALKFSLDAHVY-------VANA------LINMYSKSCAD--EAWKVFENMEFRNVISWNS 173
A+ HVY VANA LI+MY+K C D A +VF ++ +++ SWN+
Sbjct: 339 AIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAK-CGDIEAAHQVFNSILHKSLSSWNA 397
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALF-LFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
MI F M +A F +F ++++ G+ PD TF +L AC+
Sbjct: 398 MIFGF--------------AMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACS----- 438
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-----DLVSWNS 287
HS G + L + +F MT L +
Sbjct: 439 ------HS------------------------GMLDLGRHIFRSMTQDYKMTPKLEHYGC 468
Query: 288 ILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSML----EN 343
++ G KEA ++ + M ++PD + SLL AC G V+ G +++ EN
Sbjct: 469 MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPEN 528
Query: 344 HGVVPQLDHYACMVDLLGRVG--RILEAEKLIREMP----MEPDSVIWSVLLG 390
G L + V R L +K ++++P +E DSV+ ++G
Sbjct: 529 PGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 581
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 337/621 (54%), Gaps = 49/621 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+QI TL C N+ Q Q+H ++ N + Q +V LI K D L
Sbjct: 47 SQIVTTL-DGCK---NLTQIKQVHARILLNGLD--QSCYVLAKLIRTLTKLNIPVDPYPL 100
Query: 65 --FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC--- 117
F+++ N + ALI GY +E F SL+ + P F+ ++ +C
Sbjct: 101 SIFNQVNYPNPFLYNALIRGYLIEERLKESTE-FYSLMRKEGVVPVSFTFTALFKACGAK 159
Query: 118 -DYLHGKLVHA---LALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWN 172
D G+ +H L F D HV N++I+MY K E KVF+ M R+VISW
Sbjct: 160 MDVGLGRQIHGQTILVGGFGEDLHV--GNSMIDMYIKCGFLECGRKVFDEMPNRDVISWT 217
Query: 173 SMIAAF-RACKLEAQA-----------------IELFAKMKNEEEALFLFRQLQREGMAP 214
+I+A+ ++ +E+ + FA+ EA+ F ++Q G+
Sbjct: 218 ELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVET 277
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAK--YGFEDDTVIANALIHAYARCGSISLSKQ 272
D T V+ ACA L ++A + + K +G + V+ +ALI Y++CGS+ + +
Sbjct: 278 DEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYR 337
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VF M ++ S++S++ +A+HG+ +A++LF M ++P+ TF+ +L+ACSHAG+
Sbjct: 338 VFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGM 397
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V++G ++F M + +G+ P DHY CMVDLLGR GR+ EA +L++ MP+EP +W LL
Sbjct: 398 VEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALL 457
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
G+CR H +A +AA L +LEP ++ ++NIY G +N +RK M+ +RK
Sbjct: 458 GACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRK 517
Query: 450 YPGLSWIEIE-NRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
P SWIE E VHEF SG HP+ I + LE+L+ +L+ GY P S +D+ +E
Sbjct: 518 NPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDE 577
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K L HSEKLAL F +++ S IRI+KN+RIC DCH+ + AS + G+EI+
Sbjct: 578 DKRRILMTHSEKLALAFGLIST----IPGSKIRIVKNLRICEDCHSVICGASQITGREII 633
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD RFHHF D ICSC ++W
Sbjct: 634 VRDIMRFHHFHDGICSCGNFW 654
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/481 (40%), Positives = 290/481 (60%), Gaps = 31/481 (6%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVS--WTALISGYAQHGNAEECFRLFCS 98
++ V LI+MY+K G L DAR +FD V+ W A+ISGY+Q G ++E L+
Sbjct: 356 NVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQ 415
Query: 99 LLQ-------YFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVY-VANALINMYSK 150
+ Q Y + + F+ + S + G++VH + LK LD V V NA+ + YSK
Sbjct: 416 MCQNGITSDLYTYCSVFNAIAASKSLQF--GRVVHGMVLKCGLDLMVVSVNNAIADAYSK 473
Query: 151 SCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
C ++ KVF+ ME R+++SW +++ A+ L EEAL F ++
Sbjct: 474 -CGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLG-------------EEALATFCLMR 519
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
EG AP+ TFS VL +CA L + VH L+ K G + + I +ALI YA+CGSI+
Sbjct: 520 EEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSIT 579
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
+ +VFDK++ D+VSW +I+ YA HG ++ALQLF M ++ ++ T + +L ACS
Sbjct: 580 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 639
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
H G+V+EG F M + +GVVP+++HYAC++DLLGRVGR+ +A + IR+MPMEP+ ++W
Sbjct: 640 HGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVW 699
Query: 386 SVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGS 445
LLG CR HG L E+AA K+ + P S +V +SN Y +GS+ +R MK
Sbjct: 700 QTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQ 759
Query: 446 RVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDI 505
V+K PG SWI ++ RVH+F SG ++HPQ++ I+ KLEEL ++K MGYVP+ L++
Sbjct: 760 GVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVLNNA 819
Query: 506 E 506
+
Sbjct: 820 D 820
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 213/418 (50%), Gaps = 39/418 (9%)
Query: 15 CALHGNIKQAMQLHEHMI-NNFPNEPQDLFVT-NHLINMYAKFGYLDDARHLFDEMPKRN 72
CA G+I++A +H ++ +NF E +DL V NH ++Y+K A +FDEMP+RN
Sbjct: 128 CAEKGSIREAKAVHGLVLKSNF--EDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRN 185
Query: 73 VVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHA 127
V SWT +I G +HG + F+ FC +L P++F+ ++++ SC L GK+VHA
Sbjct: 186 VFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHA 245
Query: 128 LALKFSLDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ H++V+ +L+NMY+K S D W VF M N +SWN+MI+ + L
Sbjct: 246 QIVMRGFATHIFVSTSLLNMYAKLGSIEDSYW-VFNMMTEHNQVSWNAMISGCTSNGLHL 304
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+A +LF +MKN P+ T V KA LV V + ++
Sbjct: 305 EAFDLFVRMKN-------------GACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASEL 351
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS--WNSILKAYALHGQAKEALQ 303
G E + ++ ALI Y++CGS+ ++ VFD + V+ WN+++ Y+ G ++EAL+
Sbjct: 352 GIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALE 411
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV---VPQLDHYACMV 357
L+ M + D T+ S+ +A + + +Q G +V H M+ G+ V +++ +
Sbjct: 412 LYVQMCQNGITSDLYTYCSVFNAIAASKSLQFG-RVVHGMVLKCGLDLMVVSVNN--AIA 468
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEP 413
D + G + + K+ M E D V W+ L+ + + GE LA + + P
Sbjct: 469 DAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 525
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDD--TVIANALIHAYARCGSISLSKQVFDKMTY 279
VL+ CA + R A AVH L+ K FED V+ N H Y++C + VFD+M
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
++ SW ++ HG + + F M + PD + +++ +C ++ G K+
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG-KM 242
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
H+ + G + ++++ ++G I E + M E + V W+ ++ C +G
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSI-EDSYWVFNMMTEHNQVSWNAMISGCTSNG 301
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/619 (32%), Positives = 337/619 (54%), Gaps = 52/619 (8%)
Query: 11 LFHACALHGNIK--QAMQLHEHMINNFPNEPQDLFVTNHLINM---------YAKFGYLD 59
L +C+ ++K L H+I+ D+FV + L+ + + L
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLIS-------DVFVASRLLALALCVDDSTFHKPTNLLG 70
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSL-----ASV 113
A +F ++ N+ + LI ++ + F + +L+ +P+ + AS
Sbjct: 71 YAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAST 130
Query: 114 LISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWN 172
+ C + G+ H+ ++F VYV N+L++MY+ A ++F M FR+V+SW
Sbjct: 131 EMECVVV-GEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWT 189
Query: 173 SMIAAFRACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREGMAP 214
SM+A + C + A E+F +M + E+A+ LF ++REG+
Sbjct: 190 SMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVA 249
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ V+ +CA L H + K + ++ AL+ Y RCG I + +VF
Sbjct: 250 NETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVF 309
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
+++ D +SW+SI+K A+HG A +A+ FS M P T ++LSACSH GLV
Sbjct: 310 EELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVD 369
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
+G +++ +M ++G+ P+L+HY C+VD+LGR G++ EAE I +MP++P++ I LLG+
Sbjct: 370 KGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGA 429
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
C+ + T +AE L +++P S +V +SNIY +G + K +R MK V+K P
Sbjct: 430 CKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPP 489
Query: 452 GLSWIEIENRVHEFASG-GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHK 510
G S IEI+ ++++F+ G ++HP+ I + EE++G+++ +GY T A D++EE K
Sbjct: 490 GWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEK 549
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
E ++ HSEKLA+ + +M + + IRI+KN+R+C DCH KL S++ G+E +VR
Sbjct: 550 ETAIHMHSEKLAIAYGMMKT----KTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVR 605
Query: 571 DSNRFHHFKDRICSCNDYW 589
D NRFHHF++ +CSC DYW
Sbjct: 606 DRNRFHHFRNGLCSCRDYW 624
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/471 (38%), Positives = 287/471 (60%), Gaps = 22/471 (4%)
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFRAC 181
+HAL K + + V N +++ Y+K + + A KVF+ ME R+V+SWNSMIA +
Sbjct: 220 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQN 278
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ A+AI L++KM N G+ + S VL ACA + +H+
Sbjct: 279 GMSAEAIGLYSKMLNVGG-----------GIKCNAVALSAVLLACAHAGAIQTGKRIHNQ 327
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ + G E++ + +++ Y++CG + ++ + F K+ +++SW++++ Y +HG+ +EA
Sbjct: 328 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 387
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
L++F+ M ++P+ TF+S+L+ACSHAGL+ EG +++M + G+ ++HY CMVD
Sbjct: 388 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 447
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LLGR G + EA LI+EM ++PD+ IW LL +CR H LAE++ +L +L+ +S
Sbjct: 448 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGY 507
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SNIY + + IR +K R+ K PG S E++ +++ F G K HPQ I
Sbjct: 508 YVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEI 567
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
+ LE+L+ +++ GYVP T LHD++EE KE L HSEKLA+ FA+MN RS
Sbjct: 568 YSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNS----VPRS 623
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
VI I+KN+R+C DCH MK + + +EI++RD RFHHFKD +CSC DYW
Sbjct: 624 VIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 58/293 (19%)
Query: 44 VTNHLINMYAKFGY--LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
V N +++ YAK G L+ AR +FD M +R+VVSW ++I+ YAQ+G + E L+ +L
Sbjct: 235 VVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 293
Query: 102 Y---FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCAD 154
N +L++VL++C + GK +H ++ L+ +VYV ++++MYSK
Sbjct: 294 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRV 353
Query: 155 E-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
E A + F ++ +N++SW++MI + +EAL +F +++R G+
Sbjct: 354 EMASRAFRKIKEKNILSWSAMITG-------------YGMHGRGQEALEIFTEMKRSGLR 400
Query: 214 PDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
P++ TF VL AC AGL+ E +++ ++G E ++ R G +
Sbjct: 401 PNYITFISVLAACSHAGLLDEGR-YWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLD--- 456
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSAC 324
EA L M V+PD+A + +LLSAC
Sbjct: 457 ----------------------------EAYSLIKEMKVKPDAAIWGALLSAC 481
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 114/199 (57%), Gaps = 11/199 (5%)
Query: 220 SIVLKACAGLVTERHASA-VHSLIAKYGFEDDTVIANALIHAYARCGS--ISLSKQVFDK 276
++V + + V +R +A +H+LIAK GFE + + N ++ +YA+ GS + ++++VFD
Sbjct: 201 ALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDT 260
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQ 331
M D+VSWNS++ YA +G + EA+ L+S M ++ ++ ++L AC+HAG +Q
Sbjct: 261 ME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQ 319
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G ++ H+ + G+ + +VD+ + GR+ A + R++ E + + WS ++
Sbjct: 320 TGKRI-HNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKI-KEKNILSWSAMITG 377
Query: 392 CRKHGETRLAELAATKLKQ 410
HG + A T++K+
Sbjct: 378 YGMHGRGQEALEIFTEMKR 396
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 96/176 (54%), Gaps = 14/176 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
ACA G I+ ++H ++ E +++V +++MY+K G ++ A F ++ ++N+
Sbjct: 311 ACAHAGAIQTGKRIHNQVVRMGLEE--NVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNI 368
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLV------- 125
+SW+A+I+GY HG +E +F + + PN + SVL +C H L+
Sbjct: 369 LSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS--HAGLLDEGRYWY 426
Query: 126 HALALKFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAAFR 179
+A+ +F ++A V ++++ ++ C DEA+ + + M+ + + W ++++A R
Sbjct: 427 NAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACR 482
>gi|302770356|ref|XP_002968597.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
gi|300164241|gb|EFJ30851.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
Length = 631
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 212/596 (35%), Positives = 327/596 (54%), Gaps = 34/596 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A+L C ++ ++H +++ +DLF+ NHLI MY K G ++DAR +F++
Sbjct: 56 FASLLQQCGRSRSLPDGRRIHAEIVDT--GLGKDLFLGNHLIQMYGKCGAMEDARAVFEK 113
Query: 68 MPKRN-VVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISC----DYLH 121
+ N VVSWTA+ISG+A HG + F ++ + PNE + S+L +C D H
Sbjct: 114 IESPNSVVSWTAMISGFALHGREDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDVKH 173
Query: 122 GKLVHALALKFSLD-AHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFR 179
G +H L +++ V ALI+MY K E A +VFE ME R+++ WN+MI
Sbjct: 174 GTAIHELVESSEFGRSYLSVGTALIDMYGKCGRPELASRVFEKMERRDLVVWNAMIT--- 230
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ ++ +E+AL LFR + EG PD T L+AC+ L + +H
Sbjct: 231 ----------VCSQQGLDEQALRLFRVMDLEGHTPDEVTLVAALEACSNLNSLAAGKKLH 280
Query: 240 SLIAKYGFEDDT--VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
LI G + V+A AL++ Y R G + + +VF+KM + +LV+W +++ A+A HG
Sbjct: 281 ELILDAGLDSSIKMVLATALVNMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQHGD 340
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A+ L M VQ D F+S+L ACSHAG+++ G F M+ + GV HY+
Sbjct: 341 V-HAIDLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGLSCFQGMVADFGVRGGAAHYS 399
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CMVDLL R GR+ EAE+L+ MP EP + LL +CR G+T A L P
Sbjct: 400 CMVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAACRVSGDTPRGARVARLASGLIPL 459
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG-KRHP 473
D+ +V MS+ Y + +++ +R+ M V+K G S +E++NRVH+F +G H
Sbjct: 460 DAAPYVLMSHAYAAAEKWDEVAEVRERMAKLGVKKPRGWSCVEVKNRVHQFFAGNFSWHS 519
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ I +L L +K GYVP+T H ++E+ KE+ L HSE++A+ F ++ +
Sbjct: 520 EAAEIEVELRRLQAVVKEAGYVPDTGQIGHCVQEDDKEDLLALHSERVAIAFGLLRVPAG 579
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I ++KN+R+C DCH K+ S +G+ IVVRD+ RFH F++ CSC DYW
Sbjct: 580 L----PIHVVKNLRVCSDCHAVAKIISRSVGRRIVVRDAYRFHRFENGTCSCGDYW 631
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 205/598 (34%), Positives = 327/598 (54%), Gaps = 35/598 (5%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++ T+ ACA G + + MQ H + FV + L++MY+K ++D A + +
Sbjct: 123 VFTTVLSACAHSGRVFEGMQCHGFLFK--FGLVFHHFVKSSLVHMYSKCFHVDLALQVLE 180
Query: 67 EM-----PKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL 120
+ + ++++ + G E + ++ + + + SV+ C +
Sbjct: 181 SEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQI 240
Query: 121 H----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSM 174
G VHA LK L V+V + L++M+ K C D A KVF+ ++ RNV+ W S+
Sbjct: 241 RDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGK-CGDVLSARKVFDGLQNRNVVVWTSL 299
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ A+ Q E EE L L + REG + TF+++L A AG+ RH
Sbjct: 300 MTAY------LQNGEF-------EETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRH 346
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ + K G ++ ++ NALI+ Y++CG I S VF M D+++WN+++ Y+
Sbjct: 347 GDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQ 406
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG K+AL LF +M P+ TFV +LSAC+H LV EG + ++++ V P L+
Sbjct: 407 HGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLE 466
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY C+V +L R G + EAE +R ++ D V W VLL +C H L A + Q+
Sbjct: 467 HYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQM 526
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+P D + +SN+Y + S++ +IRK M+ V+K PG+SWIEI N VH F+S G
Sbjct: 527 DPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSN 586
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQG 531
HP+ I+ K++ L+ +K +GYVP LHD+E+E KE L +HSEKLA+ + +M
Sbjct: 587 HPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIP 646
Query: 532 SLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + IR++KN+RIC DCH +KL S + + I+VRD++RFHHF+D C+C D+W
Sbjct: 647 S----PAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 181/372 (48%), Gaps = 29/372 (7%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF- 104
N LIN+Y K L AR+LFDEM R+VVS+ L+ GY G E +LF +++ +
Sbjct: 59 NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118
Query: 105 PNEFSLASVLISCDY----LHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKV 159
PNE+ +VL +C + G H KF L H +V ++L++MYSK D A +V
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178
Query: 160 FE----NMEFRN-VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
E N++ N +NS++ A +A+E+ +M + EG+
Sbjct: 179 LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVD-------------EGVVW 225
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T+ V+ C + VH+ + K G D + + L+ + +CG + +++VF
Sbjct: 226 DSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVF 285
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQ 331
D + ++V W S++ AY +G+ +E L L S M+ + TF LL+A + ++
Sbjct: 286 DGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALR 345
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
G+ + H+ +E G+ ++ ++++ + G I + + +M D + W+ ++
Sbjct: 346 HGD-LLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR-NRDIITWNAMICG 403
Query: 392 CRKHGETRLAEL 403
+HG + A L
Sbjct: 404 YSQHGLGKQALL 415
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
E + + N+LI+ Y +C + L++ +FD+M+ +VS+N ++ Y G+ E ++LF N
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 308 MN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
M QP+ F ++LSAC+H+G V EG + H L G+V
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQC-HGFLFKFGLV 153
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 288/489 (58%), Gaps = 23/489 (4%)
Query: 107 EFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEF 165
EF+ + +L + + VHA +K + + V AL++ Y K +EA KVF ++
Sbjct: 1 EFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 60
Query: 166 RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
+++++W++M+A + A+ E A+ +F +L + G+ P+ TFS +L
Sbjct: 61 KDIVAWSAMLAGY-------------AQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 107
Query: 226 CAGL-VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
CA + H K + +++AL+ YA+ G+I +++VF + DLVS
Sbjct: 108 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 167
Query: 285 WNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
WNS++ YA HGQA +AL +F M V+ D TF+ + +AC+HAGLV+EG K F M+
Sbjct: 168 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 227
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ + P +H +CMVDL R G++ +A K+I MP S IW +L +CR H +T L
Sbjct: 228 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 287
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
LAA K+ ++P DS +V +SN+Y SG + + +RK M V+K PG SWIE++N+
Sbjct: 288 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 347
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
+ F +G + HP ++ I+ KLE+L +LK +GY P+TS L DI++EHKE L HSE+L
Sbjct: 348 TYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERL 407
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF-KD 580
A+ F ++ + S + I+KN+R+C DCH +KL + + +EIVVRDSNRFHHF D
Sbjct: 408 AIAFGLI----ATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSD 463
Query: 581 RICSCNDYW 589
+CSC D+W
Sbjct: 464 GVCSCGDFW 472
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 167/337 (49%), Gaps = 40/337 (11%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
++H ++ N + V L++ Y K G +++A +F + +++V+W+A+++GYAQ
Sbjct: 18 EVHAQVVKT--NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 75
Query: 86 HGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH-----GKLVHALALKFSLDAHVY 139
G E ++F L + PNEF+ +S+L C + GK H A+K LD+ +
Sbjct: 76 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 135
Query: 140 VANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
V++AL+ MY+K E A +VF+ ++++SWNSMI+ +A+
Sbjct: 136 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG-------------YAQHGQAM 182
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIA-- 254
+AL +F+++++ + D TF V AC AGLV E ++ + D IA
Sbjct: 183 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEE--GEKYFDIMVR-----DCKIAPT 235
Query: 255 ----NALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQAKEA-LQLFSNM 308
+ ++ Y+R G + + +V + M + W +IL A +H + + L +
Sbjct: 236 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 295
Query: 309 NVQP-DSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++P DSA +V L + + +G QE KV M E +
Sbjct: 296 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 332
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 8 YATLFHACA-LHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++++ + CA + ++ Q Q H I + + L V++ L+ MYAK G ++ A +F
Sbjct: 101 FSSILNVCAATNASMGQGKQFHGFAIKSRLD--SSLCVSSALLTMYAKKGNIESAEEVFK 158
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLHGKLV 125
++++VSW ++ISGYAQHG A + +F + + + + V +C H LV
Sbjct: 159 RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC--THAGLV 216
Query: 126 HALALKFSL---DAHVYVA----NALINMYSKSCA-DEAWKVFENM-EFRNVISWNSMIA 176
F + D + + ++++YS++ ++A KV ENM W +++A
Sbjct: 217 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILA 276
Query: 177 AFRACK---LEAQAIELFAKMKNEEEALFLF 204
A R K L A E MK E+ A ++
Sbjct: 277 ACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 307
>gi|302765350|ref|XP_002966096.1| hypothetical protein SELMODRAFT_84620 [Selaginella moellendorffii]
gi|300166910|gb|EFJ33516.1| hypothetical protein SELMODRAFT_84620 [Selaginella moellendorffii]
Length = 598
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/603 (34%), Positives = 337/603 (55%), Gaps = 41/603 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLD 59
F +T+ YA L CA N+ ++HEH+ + NE F+ N L+ MY K +D
Sbjct: 23 FCSNTEAYAALLRRCANERNLVDGKRVHEHLRRYGYENET---FLGNLLVQMYGKCSSID 79
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-----NEFSLASVL 114
DA FD + K+++ SW +I+ +A++G C ++ Q P N + +VL
Sbjct: 80 DAALAFDSIRKKDLFSWNIMIAAFAENG----CLDRAVAVFQLMEPARIKRNRGTFVAVL 135
Query: 115 IS-CDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWN 172
+ D GK +H L+ + VA AL++MY D+A +VFE + +++ WN
Sbjct: 136 AAGLDLEQGKKIHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVPKLDLVCWN 195
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEE--ALFLFRQLQREGMAPDWCTFSIVLKACAGLV 230
+MI A+ ++N++ AL +F +L+ EG+ + T+ L ACA L
Sbjct: 196 AMITAY---------------VQNDQGRGALEVFHRLEMEGVKCNEVTYLAALDACACLA 240
Query: 231 TERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+ ++H +++ G + +AN+L++ Y + G++ ++++F+ M D+ SWN ++
Sbjct: 241 VQSEGRSLHKRVSEAGLLLTSFKVANSLVNMYGKSGNLEAAEEIFESMPSRDISSWNVLM 300
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
Y +G A+ F+ +PDS TF+++L ACSHAGL+ G ++ S+ E+ G+
Sbjct: 301 TVYGHNGLGDLAVDRFTESCLEGFEPDSITFLAVLQACSHAGLLDTGVELLVSIQEDWGI 360
Query: 347 VPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAAT 406
P HY C+VDLLGR G +++AE LI MP EP+ W LLG CR + + E A
Sbjct: 361 DPTQYHYLCVVDLLGRSGELVKAEALINNMPFEPEEGAWRSLLGGCRVNSDVGRGERATQ 420
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFA 466
+L + DS +V M+NIY +F+ A +R M V+K PGLSWIE+ R+H FA
Sbjct: 421 RLLVMSE-DSSPYVLMANIYASIRNFDLAERLRSVMADRNVKKQPGLSWIEVRGRIHTFA 479
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
+ K H ++E I+ L+ L +L+ GY P+T +AL+D+EEE K L HH EKLA++F
Sbjct: 480 ANDKLHARKEEIYAGLDRLFVELQREGYRPDTRVALYDVEEEKKVRMLLHHGEKLAIMFG 539
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
+M+ + S + ++KN+R+C DCH K+ + + ++IV+RD++RFHHF++ CSC
Sbjct: 540 LMSTP----DGSPLFVLKNLRVCADCHAATKIIAKITKRKIVMRDASRFHHFENGKCSCC 595
Query: 587 DYW 589
DYW
Sbjct: 596 DYW 598
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
+ L +E + ++ +L+ CA VH + +YG+E++T + N L+ Y +C
Sbjct: 16 KDLGQERFCSNTEAYAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKC 75
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHG---QAKEALQLFSNMNVQPDSATFVSLL 321
SI + FD + DL SWN ++ A+A +G +A QL ++ + TFV++L
Sbjct: 76 SSIDDAALAFDSIRKKDLFSWNIMIAAFAENGCLDRAVAVFQLMEPARIKRNRGTFVAVL 135
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
+ AGL E K H + + G+ ++ + G G +A ++ ++P + D
Sbjct: 136 A----AGLDLEQGKKIHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVP-KLD 190
Query: 382 SVIWSVLLGSCRKHGETRLA 401
V W+ ++ + ++ + R A
Sbjct: 191 LVCWNAMITAYVQNDQGRGA 210
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 285/485 (58%), Gaps = 25/485 (5%)
Query: 109 SLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRN 167
SL S ++C+ L+ + FS + N +I+ + + E A KVF M R+
Sbjct: 51 SLISTYVNCNQLN-LAYQVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRD 109
Query: 168 VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
V++WNSMI + + EEAL F+ + + PD TF+ V+ ACA
Sbjct: 110 VVTWNSMIGGY-------------VRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACA 156
Query: 228 GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNS 287
L HA +H L+ + E + ++++ALI Y++CG I +K+VF+ + +D+ WNS
Sbjct: 157 RLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNS 216
Query: 288 ILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH 344
++ A+HG A +A+ +FS M NV PDS TF+ +L ACSH GLV+EG K F M +
Sbjct: 217 LINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYY 276
Query: 345 GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELA 404
+ PQL+HY MVDLLGR G + EA +I MPMEPD ++W +LL +CR H T L E+A
Sbjct: 277 SIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELGEVA 336
Query: 405 ATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHE 464
+ + GD +V +SNIYC ++ A+ +R+ MK VRK G SW E E+ VH
Sbjct: 337 VANISGPKSGD---YVLLSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHR 393
Query: 465 FASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALV 524
F +G K HP+ EA++K LE LI + K G+VP T L + D+ EE KEE LYHHSEKLAL
Sbjct: 394 FRAGDKSHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALA 453
Query: 525 FAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICS 584
+ I+ + IRI KN+RIC DCHN++K+ S LL + I++RD RFH F+ CS
Sbjct: 454 YGILKTSP----GTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCS 509
Query: 585 CNDYW 589
C DYW
Sbjct: 510 CGDYW 514
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 155/361 (42%), Gaps = 90/361 (24%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEH---------------MINNFPNEPQ---------- 40
Q++ L AC L +I+ A + H +I+ + N Q
Sbjct: 12 QLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVIRQ 71
Query: 41 ------DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
L N +I+ + + G + A+ +F +MP R+VV+W ++I GY ++G EE R
Sbjct: 72 VFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALR 131
Query: 95 LFCSLLQYFF-PNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYS 149
F ++L P++F+ ASV+ +C L H + +H L ++ ++ + +++ALI+MYS
Sbjct: 132 SFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYS 191
Query: 150 KSCADEAWK-VFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
K E K VFE++E +V WNS+I L A+ +F+KM +
Sbjct: 192 KCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKM-------------E 238
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
E + PD TF +LKAC + CG +
Sbjct: 239 AENVLPDSLTFLGILKAC-----------------------------------SHCGLVK 263
Query: 269 LSKQVFDKMTYH-----DLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSA 323
++ FD M + L + +++ G EA + + M ++PD + LLSA
Sbjct: 264 EGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSA 323
Query: 324 C 324
C
Sbjct: 324 C 324
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 41/245 (16%)
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC--------- 264
PD F +L+AC R A+ H+ I ++G+ ++ IA +LI Y C
Sbjct: 9 PDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQV 68
Query: 265 ------------------------GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
G ++K+VF KM D+V+WNS++ Y +G+ +E
Sbjct: 69 IRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEE 128
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+ F M NV+PD TF S+++AC+ G + + H ++ + + ++
Sbjct: 129 ALRSFQAMLSSNVEPDKFTFASVITACARLGALNHA-QWLHDLMVQKRIEVNFILSSALI 187
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL--KQLEPGD 415
D+ + GRI E K + E D +W+ L+ HG A + +K+ + + P D
Sbjct: 188 DMYSKCGRI-ETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLP-D 245
Query: 416 SLGFV 420
SL F+
Sbjct: 246 SLTFL 250
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+A++ ACA G + A LH+ M+ + +++ LI+MY+K G ++ A+ +F+
Sbjct: 148 FASVITACARLGALNHAQWLHDLMVQK--RIEVNFILSSALIDMYSKCGRIETAKEVFES 205
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLHGKLVH 126
+ + +V W +LI+G A HG A + +F + + P+ + +L +C H LV
Sbjct: 206 VERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACS--HCGLVK 263
Query: 127 ALALKFSLDAHVYVA-------NALINMYSKS-CADEAWKVFENMEFR-NVISWNSMIAA 177
F L + Y A++++ ++ DEA+ + M +VI W +++A
Sbjct: 264 EGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSA 323
Query: 178 FRA 180
R
Sbjct: 324 CRT 326
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 322/594 (54%), Gaps = 67/594 (11%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLI 115
L AR L P+ + + L+ GY++ +F +++ + FP+ FS A V+
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 116 SCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVIS 170
+ + G +H ALK L++H++V LI MY C + A KVF+ M N+++
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 171 WNSMIAA--------------------------------FRACKLEAQAIELFAKMKNEE 198
WN++I A +A +LE+ A +F++M + +
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELES-AKRIFSEMPHRD 233
Query: 199 ------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
E+ FR+LQR GM+P+ + + VL AC+ + +H
Sbjct: 234 DVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG 293
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD-LVSWNSILKAYALHGQAK 299
+ K G+ + NALI Y+RCG++ +++ VF+ M +VSW S++ A+HGQ +
Sbjct: 294 FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA++LF+ M V PD +F+SLL ACSHAGL++EG F M + + P+++HY CM
Sbjct: 354 EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCM 413
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDL GR G++ +A I +MP+ P +++W LLG+C HG LAE +L +L+P +S
Sbjct: 414 VDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNS 473
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V +SN Y +G + IRK M R++K S +E+ +++F +G K+
Sbjct: 474 GDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDI 533
Query: 477 AIFKKLEELIGQLKG-MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+KL+E+I +LK GY PE + AL+D+EEE KE+Q+ HSEKLAL FA+
Sbjct: 534 EAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLS---- 589
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + IRI+KN+RIC DCH MKL S + G EI+VRD NRFH FKD CSC DYW
Sbjct: 590 KGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 28/309 (9%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FF 104
N ++ Y K G L+ A+ +F EMP R+ VSW+ +I G A +G+ E F F L +
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWK 158
PNE SL VL +C + GK++H K V V NALI+MYS+ C + A
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR-CGNVPMARL 325
Query: 159 VFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
VFE M E R ++SW SMIA A EEA+ LF ++ G+ PD
Sbjct: 326 VFEGMQEKRCIVSWTSMIAG-------------LAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 218 TFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+F +L AC AGL+ E + Y E + ++ Y R G + +
Sbjct: 373 SFISLLHACSHAGLI-EEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFIC 431
Query: 276 KMTYHDL-VSWNSILKAYALHGQAKEALQLFSNMN-VQPDSATFVSLLS-ACSHAGLVQE 332
+M + W ++L A + HG + A Q+ +N + P+++ + LLS A + AG ++
Sbjct: 432 QMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKD 491
Query: 333 GNKVFHSML 341
+ SM+
Sbjct: 492 VASIRKSMI 500
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH--AYARCGSISLSKQVFDKMTY 279
+L +C L R + +H L KYG + D+ LI A + ++ ++++
Sbjct: 11 LLNSCKNL---RALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNK 335
D +N++++ Y+ + ++ +F M V PDS +F ++ A + ++ G +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ H HG+ L ++ + G G + A K+ EM +P+ V W+ ++ +C
Sbjct: 128 M-HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM-HQPNLVAWNAVITAC 182
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 329/578 (56%), Gaps = 48/578 (8%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-- 101
N +++MY+ + A +F+ +P +R+VVSW +LISG+ +G AE R F ++
Sbjct: 204 NSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEG 263
Query: 102 --YFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH--------VYVANALINMYSKS 151
PN ++ ++L SC L + ++ H V V AL++M+++
Sbjct: 264 TSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHAR- 322
Query: 152 CADEAW--KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C + A ++F+ +E +NV+ W++MIA + + EEAL LFRQ+
Sbjct: 323 CGNLALAREIFDGVEGKNVVCWSAMIAGYE-------------QGSCPEEALRLFRQMLM 369
Query: 210 EG------MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
EG + P+ T V+ AC+ L R AS +H G + D IA+ALI A+
Sbjct: 370 EGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAK 429
Query: 264 CGSISLSKQVFDKM--TYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFV 318
CG I +QVF +M + +VSW+S++ A +HG+ K AL+LFS M +P+ T++
Sbjct: 430 CGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYI 489
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
S+LSACSHAGLV++G F+SM +++G+ P HYAC+VDLLGR G + EA +I MP+
Sbjct: 490 SVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPI 549
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
+ D +W LL +C HG +L E+ K+ L+ V ++N+Y +G ++ +
Sbjct: 550 KADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRM 609
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL-KGMGYVPE 497
R E++ S +RK PG S+IEI N V+ F + + HP+ E I+K+L+ L ++ K YV E
Sbjct: 610 RVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTE 669
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAI--MNQGSLC----RERSVIRIMKNIRICVD 551
T L + D + + +HSE+LA+ F + +++ S C R + IRI KN+R+C D
Sbjct: 670 TGLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRD 729
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH + KL S ++ +E++VRD++RFHHF+D CSC DYW
Sbjct: 730 CHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 214/436 (49%), Gaps = 63/436 (14%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L ACA + +Q+H ++ D F L++ Y K G+ A +FDE
Sbjct: 55 FPALLKACAALRRLLPTLQVHAYLTR--LGLAADRFSAAALVDAYGKCGHAYYAAQVFDE 112
Query: 68 MPKR--NVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNE------FSLASVLISC 117
MP+ +VVSWTALIS Y+ +G +E F F + ++ + +E SL +++ +C
Sbjct: 113 MPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSAC 172
Query: 118 DY-------LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFEN--MEFR 166
G VH L +K+ ++ N++++MYS +C D AW+VF +E R
Sbjct: 173 AVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYS-ACKDVGGAWRVFNGIPIEQR 231
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA---PDWCTFSIVL 223
+V+SWNS+I+ F L +A E AL F + EG + P+ T +L
Sbjct: 232 DVVSWNSLISGF---XLNGEA----------ERALRTFEDMVSEGTSAVEPNRVTVIALL 278
Query: 224 KACAGLVTERHASAVHSLIAKYG----FEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
K+CA L +S VH I+ D V+ AL+ +ARCG+++L++++FD +
Sbjct: 279 KSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEG 338
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---------NVQPDSATFVSLLSACSHAGLV 330
++V W++++ Y +EAL+LF M V+P++ T VS+++ACS G
Sbjct: 339 KNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGAS 398
Query: 331 QEGNKVFHSMLENHGVVPQLDHYA----CMVDLLGRVGRILEAEKLIREMPMEPDSVI-W 385
+ SM+ + V LD A ++D+ + G I ++ EM +V+ W
Sbjct: 399 RSA-----SMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSW 453
Query: 386 SVLLGSCRKHGETRLA 401
S ++G+ HGE + A
Sbjct: 454 SSMIGAEGIHGEGKRA 469
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 198/437 (45%), Gaps = 65/437 (14%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPN--EPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
L +CA G ++ + +HE++ + + +D+ V L++M+A+ G L AR +FD +
Sbjct: 277 LLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGV 336
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-------YFFPNEFSLASVLISCDYL- 120
+NVV W+A+I+GY Q EE RLF +L PN +L SV+ +C L
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENME--FRNVISWNS 173
++H A+ LD +A+ALI+M +K C D +VF M+ R V+SW+S
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAK-CGDIEHGRQVFSEMDESTRTVVSWSS 455
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVT 231
MI A +A+ELF++M+ G P+ T+ VL AC AGLV
Sbjct: 456 MIGAEGIHGEGKRALELFSEMRT-------------GGYEPNEITYISVLSACSHAGLV- 501
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILK 290
E+ S +S+ YG L+ R G + + V M DL W S+L
Sbjct: 502 EQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLA 561
Query: 291 AYALHGQA-------KEALQLFSN--------MNVQPDSATF---VSLLSACSHAGL--- 329
A LHG K+ L L SN N+ D+ + V + +GL
Sbjct: 562 ACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKI 621
Query: 330 -----VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
++ GN+V+ M E+ P+ + +D L R+ +A K + E + +
Sbjct: 622 PGQSFIEIGNEVYSFMAEDRS-HPESEMIYKELDGLDE--RVRKAAKYVTETGLNVEDGD 678
Query: 385 WSVLLGSCRKHGETRLA 401
+ L+ C+ H E RLA
Sbjct: 679 IAGLIXRCKYHSE-RLA 694
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
++ ++ WNS+IA +N + AL F ++Q + + TF
Sbjct: 12 SISHKDTFHWNSLIAK--------------NATQNPQTALTFFTRMQAHAVPSNNFTFPA 57
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH- 280
+LKACA L VH+ + + G D A AL+ AY +CG + QVFD+M
Sbjct: 58 LLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS 117
Query: 281 -DLVSWNSILKAYALHGQAKEALQLFSNMN----------VQPDSATFVSLLSACS---H 326
D+VSW +++ AY+ +G EA F M D + +L+SAC+
Sbjct: 118 VDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCG 177
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP-DSVIW 385
+ ++ G+ V H ++ +G MV + + A ++ +P+E D V W
Sbjct: 178 SNCLRRGSAV-HGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSW 236
Query: 386 SVLLGSCRKHGETRLA-----ELAATKLKQLEP 413
+ L+ +GE A ++ + +EP
Sbjct: 237 NSLISGFXLNGEAERALRTFEDMVSEGTSAVEP 269
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 322/594 (54%), Gaps = 67/594 (11%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLI 115
L AR L P+ + + L+ GY++ +F +++ + FP+ FS A V+
Sbjct: 47 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 106
Query: 116 SCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVIS 170
+ + G +H ALK L++H++V LI MY C + A KVF+ M N+++
Sbjct: 107 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 166
Query: 171 WNSMIAA--------------------------------FRACKLEAQAIELFAKMKNEE 198
WN++I A +A +LE+ A +F++M + +
Sbjct: 167 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELES-AKRIFSEMPHRD 225
Query: 199 ------------------EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
E+ FR+LQR GM+P+ + + VL AC+ + +H
Sbjct: 226 DVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG 285
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD-LVSWNSILKAYALHGQAK 299
+ K G+ + NALI Y+RCG++ +++ VF+ M +VSW S++ A+HGQ +
Sbjct: 286 FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 345
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA++LF+ M V PD +F+SLL ACSHAGL++EG F M + + P+++HY CM
Sbjct: 346 EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCM 405
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDL GR G++ +A I +MP+ P +++W LLG+C HG LAE +L +L+P +S
Sbjct: 406 VDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNS 465
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V +SN Y +G + IRK M R++K S +E+ +++F +G K+
Sbjct: 466 GDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDI 525
Query: 477 AIFKKLEELIGQLKG-MGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+KL+E+I +LK GY PE + AL+D+EEE KE+Q+ HSEKLAL FA+
Sbjct: 526 EAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLS---- 581
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ + IRI+KN+RIC DCH MKL S + G EI+VRD NRFH FKD CSC DYW
Sbjct: 582 KGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 28/309 (9%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FF 104
N ++ Y K G L+ A+ +F EMP R+ VSW+ +I G A +G+ E F F L +
Sbjct: 199 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 258
Query: 105 PNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWK 158
PNE SL VL +C + GK++H K V V NALI+MYS+ C + A
Sbjct: 259 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR-CGNVPMARL 317
Query: 159 VFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
VFE M E R ++SW SMIA A EEA+ LF ++ G+ PD
Sbjct: 318 VFEGMQEKRCIVSWTSMIAG-------------LAMHGQGEEAVRLFNEMTAYGVTPDGI 364
Query: 218 TFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+F +L AC AGL+ E + Y E + ++ Y R G + +
Sbjct: 365 SFISLLHACSHAGLI-EEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFIC 423
Query: 276 KMTYHDL-VSWNSILKAYALHGQAKEALQLFSNMN-VQPDSATFVSLLS-ACSHAGLVQE 332
+M + W ++L A + HG + A Q+ +N + P+++ + LLS A + AG ++
Sbjct: 424 QMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKD 483
Query: 333 GNKVFHSML 341
+ SM+
Sbjct: 484 VASIRKSMI 492
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH--AYARCGSISLSKQVFDKMTY 279
+L +C L R + +H L KYG + D+ LI A + ++ ++++
Sbjct: 3 LLNSCKNL---RALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 59
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNK 335
D +N++++ Y+ + ++ +F M V PDS +F ++ A + ++ G +
Sbjct: 60 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 119
Query: 336 VFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
+ H HG+ L ++ + G G + A K+ EM +P+ V W+ ++ +C
Sbjct: 120 M-HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM-HQPNLVAWNAVITAC 174
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 196/595 (32%), Positives = 318/595 (53%), Gaps = 36/595 (6%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
+ +Y TL + + Q+H H+I + + ++NMY K G+L A+ +
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIR--AGLCSNASIETGIVNMYVKCGWLVGAKRV 239
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISCDYLH-- 121
FD+M + V+WT L+ GY Q G A + +LF L+ + F + VL +C L
Sbjct: 240 FDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEEL 299
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK +HA K L+ V V L++ Y K S + A + F+ + N +SW+++I+ +
Sbjct: 300 RFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGY 359
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQ-REGMAPDWCTFSIVLKACAGLVTERHASA 237
+M EEA+ F+ L+ + + + T++ + +AC+ L
Sbjct: 360 -------------CQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQ 406
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VH+ K +ALI Y++CG + + +VF+ M D+V+W + + +A +G
Sbjct: 407 VHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGN 466
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
A EAL+LF M ++P+S TF+++L+ACSHAGLV++G +ML + V P +DHY
Sbjct: 467 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYD 526
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
CM+D+ R G + EA + ++ MP EPD++ W L C H L ++A +L+QL+P
Sbjct: 527 CMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPE 586
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
D+ G+V N+Y +G + +A + K M ++K SWI+ + ++H F G K HPQ
Sbjct: 587 DTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQ 646
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
+ I++KL+E G ++G + + EQL HSE+LA+ F +++
Sbjct: 647 SQEIYEKLKEFDGFMEG---------DMFQCSMTERREQLLDHSERLAIAFGLISVNG-- 695
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
R+ I++ KN+R C DCH F K S + G EIV+RDS RFHHFK+ CSCNDYW
Sbjct: 696 NARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 181/395 (45%), Gaps = 33/395 (8%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y LF AC ++ LH M N + + N ++ MY + G L+DA LFDE
Sbjct: 84 YQCLFEACRELRSLSHGRLLHNRMRMGIENP--SVLLQNCVLQMYCECGSLEDADKLFDE 141
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLI-------SCDYL 120
M N VS T +IS YA+ G ++ LF +L+ S+ + L+ + D
Sbjct: 142 MSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDI- 200
Query: 121 HGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAF 178
G+ +HA ++ L ++ + ++NMY K C A +VF+ M + ++W ++
Sbjct: 201 -GRQIHAHVIRAGLCSNASIETGIVNMYVK-CGWLVGAKRVFDQMAVKKPVAWTGLMVG- 257
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAV 238
+ + +AL LF L EG+ D FS+VLKACA L R +
Sbjct: 258 ------------YTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQI 305
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
H+ +AK G E + + L+ Y +C S + + F ++ + VSW++I+ Y Q
Sbjct: 306 HACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 365
Query: 299 KEALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
+EA++ F ++ V +S T+ S+ ACS G +V ++ + Q A
Sbjct: 366 EEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 425
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++ + + G + +A ++ M PD V W+ +
Sbjct: 426 -LITMYSKCGCLDDAHEVFESMD-NPDIVAWTAFI 458
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 125/254 (49%), Gaps = 14/254 (5%)
Query: 159 VFENMEFRNVISWNSMIAAFRACKLEAQAIEL-------FAKMKNEEEALFLFRQLQREG 211
V + F + SW S+ ++ + K+ + ++ +K EA F+++ + G
Sbjct: 17 VIKTANFNQIPSWVSLKSSTSSVKISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAG 76
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI-ANALIHAYARCGSISLS 270
++ ++ + +AC L + H +H+ + + G E+ +V+ N ++ Y CGS+ +
Sbjct: 77 VSVSLYSYQCLFEACRELRSLSHGRLLHNRM-RMGIENPSVLLQNCVLQMYCECGSLEDA 135
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
++FD+M+ + VS +++ AYA G +A+ LFS M +P S+ + +LL + +
Sbjct: 136 DKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNP 195
Query: 328 GLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSV 387
+ G ++ H+ + G+ +V++ + G ++ A+++ +M ++ V W+
Sbjct: 196 RALDIGRQI-HAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVK-KPVAWTG 253
Query: 388 LLGSCRKHGETRLA 401
L+ + G R A
Sbjct: 254 LMVGYTQAGRARDA 267
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/516 (38%), Positives = 294/516 (56%), Gaps = 31/516 (6%)
Query: 87 GNAEECFRLFCSLLQY---FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVY 139
G +CF + +++ F PNE + S++ +C + G +H L +K + V
Sbjct: 614 GYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVK 673
Query: 140 VANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE 197
V NAL+N+Y K+ D + K+FE++ +N++SWN+MI L
Sbjct: 674 VVNALMNLYGKT-GDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLA------------- 719
Query: 198 EEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANAL 257
EE L F + G+ PD TF VL+ C + R + +H LI GF +T I AL
Sbjct: 720 EEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTAL 779
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
+ YA+ G + S VF ++T D ++W ++L AYA HG ++A++ F M + PD
Sbjct: 780 LDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDH 839
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
TF LL+ACSH+GLV+EG F +M + + + P+LDHY+CMVDL+GR G + +A LI+
Sbjct: 840 VTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIK 899
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNK 434
EMPMEP S +W LLG+CR + +T+L AA +L +LEP D ++ +SNIY SG +
Sbjct: 900 EMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKD 959
Query: 435 ARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG-MG 493
A IR MK + + G S+IE N++H+F G HP+ E I KKL+E+ ++K +G
Sbjct: 960 ASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELG 1019
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCH 553
+ T LHD++E+ KEE + HSEK+A+ F ++ + I I KN+RIC DCH
Sbjct: 1020 FKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLL----VISPMEPIIIRKNLRICGDCH 1075
Query: 554 NFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
K S + + I++RDS RFHHF + CSC DYW
Sbjct: 1076 ETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 1111
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 293/570 (51%), Gaps = 39/570 (6%)
Query: 46 NHLINMYAK------FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+HL+ + K YLD A + D K + + ++I + + E+ F + +
Sbjct: 46 DHLVGQFVKAVALSDHTYLDYANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRI 105
Query: 100 LQY---FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-S 151
L P+ +++ ++ +C L G VH + ++ D +V LI++Y++
Sbjct: 106 LSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELG 165
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------- 198
C D KVF ++ + + + +M+ A C A A +LF M ++
Sbjct: 166 CLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQ 225
Query: 199 -----EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
EAL LF +Q EG+ + + VL AC L HS I + + +
Sbjct: 226 VGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRL 285
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NV 310
L+ YA+CG + + +VF M ++ +W+S L A++G ++ L+LFS M V
Sbjct: 286 GTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGV 345
Query: 311 QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
P++ TFVS+L CS G V EG K F SM G+ PQLDHY C+VDL R GR+ +A
Sbjct: 346 TPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAV 405
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSG 430
+I++MPM+ + +WS LL + R + L LA+ K+ +LE + +V +SNIY S
Sbjct: 406 SIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSD 465
Query: 431 SFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLK 490
++ +R+ MK VRK PG S +E+ VHEF G K HP+ I +++ +L+
Sbjct: 466 DWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLR 525
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GY +T+ + DI+EE KE+ L HSEK A+ F IM+ + IRI+KN+R+C
Sbjct: 526 LAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMS----LKADVPIRIVKNLRVCG 581
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
DCH + S + +EI+VRD NRFHHFKD
Sbjct: 582 DCHQVSMMISKIFNREIIVRDRNRFHHFKD 611
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 148/328 (45%), Gaps = 62/328 (18%)
Query: 11 LFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDD--------- 60
L AC G + +Q+H I F N+P V LI++YA+ G LD
Sbjct: 122 LVQACTGLGMRETGLQVHGMTIRRGFDNDPH---VQTGLISLYAELGCLDSCHKVFNSVS 178
Query: 61 ----------------------ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
AR LF+ MP+++ ++W A+ISGYAQ G + E LF
Sbjct: 179 YPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHL 238
Query: 99 L-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ L+ N S+ SVL +C L G+ H+ + + V + L+++Y+K C
Sbjct: 239 MQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAK-CG 297
Query: 154 --DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D+A +VF ME +NV +W+S L A+ F E+ L LF ++++G
Sbjct: 298 DMDKAMEVFWGMEEKNVYTWSS--------ALNGLAMNGFG-----EKCLKLFSLMKQDG 344
Query: 212 MAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ P+ TF VL+ C+ G V E S+ ++G E L+ YAR G +
Sbjct: 345 VTPNAVTFVSVLRGCSVVGFVDEGQKH-FDSMRNEFGIEPQLDHYGCLVDLYARAGRLED 403
Query: 270 SKQVFDKMTY--HDLVSWNSILKAYALH 295
+ + +M H V W+S+L A ++
Sbjct: 404 AVSIIQQMPMKAHAAV-WSSLLHASRMY 430
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 55/343 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC GN ++ + +H ++ + E ++ V N L+N+Y K G L + LF++
Sbjct: 640 FLSMISACVHGGNKEEGVCIHGLVMKSGVLE--EVKVVNALMNLYGKTGDLISSCKLFED 697
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----G 122
+ +N+VSW +I + Q+G AEE F S P++ + +VL C+ +
Sbjct: 698 LSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLS 757
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H L + +A+ + AL+++Y+K +++ VF + + ++W +M+AA+
Sbjct: 758 QGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATH 817
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
AI+ F M + G++PD TF+ +L AC +GLV E
Sbjct: 818 GYGRDAIKHFELMVH-------------YGLSPDHVTFTHLLNACSHSGLVEE------- 857
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+Y FE ++S ++ ++ + ++ ++ G +
Sbjct: 858 ---GRYYFE-----------------TMSKRYRIEPRLDH-----YSCMVDLMGRSGLLQ 892
Query: 300 EALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
+A L M ++P S + +LL AC Q G K + E
Sbjct: 893 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFE 935
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ C++ G + + + + M N F EPQ L L+++YA+ G L+DA + +
Sbjct: 352 FVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQ-LDHYGCLVDLYARAGRLEDAVSIIQQ 410
Query: 68 MP-KRNVVSWTALISGYAQHGNAE 90
MP K + W++L+ + N E
Sbjct: 411 MPMKAHAAVWSSLLHASRMYKNLE 434
>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 329/615 (53%), Gaps = 69/615 (11%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGY 83
+LH + + + +++N L YA G + A+ LFDE+P ++ V WT L+S +
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIPLSDKDNVDWTTLLSSF 86
Query: 84 AQHGNAEECFRLFCSLLQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHV 138
++ G +LF + + + SL + C D G+ H +A+K V
Sbjct: 87 SRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRFGEQGHGVAVKMGFLTSV 146
Query: 139 YVANALINMYSKSCA---------------------------------DEAWKVFENMEF 165
V NAL++MY K C +VF+ M
Sbjct: 147 KVCNALMDMYGK-CGFVSEVKRIFQALEEKSVVSWTVVLDTLVKWEGLKRGREVFDEMPE 205
Query: 166 RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKA 225
RNV++W M+A + + +EL A+M + R G ++ T +L A
Sbjct: 206 RNVVAWTLMVAGYLGAGFTREVLELLAEM------------VFRCGHGLNFVTLCSMLSA 253
Query: 226 CA---GLVTER--HASAVHS--LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT 278
CA LV R H A+ ++ + D ++ AL+ YA+CG+I S +VF M
Sbjct: 254 CAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLMR 313
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNM--NVQPDSATFVSLLSACSHAGLVQEGNKV 336
++V+WN++ A+HG+ + + +F M V+PD TF +LLSACSH G+V EG +
Sbjct: 314 KRNVVTWNALFSGLAMHGKGRMVIDMFPEMVREVKPDDLTFTALLSACSHLGMVDEGWRC 373
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
FHS L+ +G+ P++DHYACMVD+LGR GRI EAE L+REMP+ P+ V+ LLGSC HG
Sbjct: 374 FHS-LQFYGLEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVLGSLLGSCSVHG 432
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ +AE +L Q+ PG + + MSN+Y G + A +R ++ +RK PGLS I
Sbjct: 433 KLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRGSLRNRGIRKIPGLSSI 492
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETS--LALHDIEEEHKEEQL 514
+ + VH F+SG + HP+ + ++ KL E+I +++ GYVP+ S ++ + + E KE+ L
Sbjct: 493 YVNDSVHRFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPDISGLVSPSEGDLEEKEQAL 552
Query: 515 YHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNR 574
HSEKLA+ F ++ + R+ + + KN+RIC DCH+ MK+ S + +EI++RD NR
Sbjct: 553 CCHSEKLAVCFGLLET----KPRTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNR 608
Query: 575 FHHFKDRICSCNDYW 589
FH FK CSC+DYW
Sbjct: 609 FHQFKGGSCSCSDYW 623
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 147/345 (42%), Gaps = 62/345 (17%)
Query: 119 YLH-GKLVHALALKFSLD--AHVYVANALINMYSKSCA-DEAWKVFENMEF--RNVISWN 172
+LH G+ +HA+ L Y++NAL Y+ S A K+F+ + ++ + W
Sbjct: 21 FLHPGRELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIPLSDKDNVDWT 80
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
+++++F L +++LF +M+ R+ + D + + CA L
Sbjct: 81 TLLSSFSRFGLLVNSMKLFVEMR-------------RKRVEIDHVSLVCLFGVCAKLEDL 127
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS------------------------ 268
R H + K GF + NAL+ Y +CG +S
Sbjct: 128 RFGEQGHGVAVKMGFLTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTL 187
Query: 269 -------LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ----PDSATF 317
++VFD+M ++V+W ++ Y G +E L+L + M + + T
Sbjct: 188 VKWEGLKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY------ACMVDLLGRVGRILEAEK 371
S+LSAC+ +G + G V L+ ++ + + Y +VD+ + G I + K
Sbjct: 248 CSMLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIK 307
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLA-ELAATKLKQLEPGD 415
+ R M + + V W+ L HG+ R+ ++ +++++P D
Sbjct: 308 VFRLM-RKRNVVTWNALFSGLAMHGKGRMVIDMFPEMVREVKPDD 351
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 47/223 (21%)
Query: 10 TLFHACALHGNIKQAMQLHEH-----MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
++ ACA GN+ +H + M+ + V L++MYAK G +D + +
Sbjct: 249 SMLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKV 308
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKL 124
F M KRNVV+W AL SG A HG +F +++ P++ + ++L +C +L
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPEMVREVKPDDLTFTALLSACSHL---- 364
Query: 125 VHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
DE W+ F +++F + A
Sbjct: 365 --------------------------GMVDEGWRCFHSLQFYGLEPKVDHYACM------ 392
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA 227
+++ + EEA L R++ + P+ +L +C+
Sbjct: 393 ---VDILGRAGRIEEAEILMREMP---VPPNEVVLGSLLGSCS 429
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 329/578 (56%), Gaps = 48/578 (8%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMP--KRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-- 101
N +++MY+ + A +F+ +P +R+VVSW +LISG+ +G AE R F ++
Sbjct: 204 NSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEG 263
Query: 102 --YFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH--------VYVANALINMYSKS 151
PN ++ ++L SC L + ++ H V V AL++M+++
Sbjct: 264 TSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHAR- 322
Query: 152 CADEAW--KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQR 209
C + A ++F+ +E +NV+ W++MIA + + EEAL LFRQ+
Sbjct: 323 CGNLALAREIFDGVEGKNVVCWSAMIAGYE-------------QGSCPEEALRLFRQMLM 369
Query: 210 EG------MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
EG + P+ T V+ AC+ L R AS +H G + D IA+ALI A+
Sbjct: 370 EGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAK 429
Query: 264 CGSISLSKQVFDKM--TYHDLVSWNSILKAYALHGQAKEALQLFSNMNV---QPDSATFV 318
CG I +QVF +M + +VSW+S++ A +HG+ K AL+LFS M +P+ T++
Sbjct: 430 CGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYI 489
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
S+LSACSHAGLV++G F+SM +++G+ P HYAC+VDLLGR G + EA +I MP+
Sbjct: 490 SVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPI 549
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
+ D +W LL +C HG +L E+ K+ L+ V ++N+Y +G ++ +
Sbjct: 550 KADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRM 609
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQL-KGMGYVPE 497
R E++ S +RK PG S+IEI N V+ F + + HP+ E I+K+L+ L ++ K YV E
Sbjct: 610 RVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTE 669
Query: 498 TSLALHDIEEEHKEEQLYHHSEKLALVFAI--MNQGSLC----RERSVIRIMKNIRICVD 551
T L + D + + +HSE+LA+ F + +++ S C R + IRI KN+R+C D
Sbjct: 670 TGLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRD 729
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH + KL S ++ +E++VRD++RFHHF+D CSC DYW
Sbjct: 730 CHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 215/436 (49%), Gaps = 63/436 (14%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L ACA + +Q+H ++ D F L++ Y K G+ A +FDE
Sbjct: 55 FPALLKACAALRRLLPTLQVHAYLTR--LGLAADRFSAAALVDAYGKCGHAYYAAQVFDE 112
Query: 68 MPKR--NVVSWTALISGYAQHGNAEECFRLFCSL--LQYFFPNE------FSLASVLISC 117
MP+ +VVSWTALIS Y+ +G +E F+ F + ++ + +E SL +++ +C
Sbjct: 113 MPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSAC 172
Query: 118 DY-------LHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFEN--MEFR 166
G VH L +K+ ++ N++++MYS +C D AW+VF +E R
Sbjct: 173 AVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYS-ACKDVGGAWRVFNGIPIEQR 231
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA---PDWCTFSIVL 223
+V+SWNS+I+ F L +A E AL F + EG + P+ T +L
Sbjct: 232 DVVSWNSLISGF---TLNGEA----------ERALRTFEDMVSEGTSAVEPNRVTVIALL 278
Query: 224 KACAGLVTERHASAVHSLIAKYG----FEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
K+CA L +S VH I+ D V+ AL+ +ARCG+++L++++FD +
Sbjct: 279 KSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEG 338
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---------NVQPDSATFVSLLSACSHAGLV 330
++V W++++ Y +EAL+LF M V+P++ T VS+++ACS G
Sbjct: 339 KNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGAS 398
Query: 331 QEGNKVFHSMLENHGVVPQLDHYA----CMVDLLGRVGRILEAEKLIREMPMEPDSVI-W 385
+ SM+ + V LD A ++D+ + G I ++ EM +V+ W
Sbjct: 399 RSA-----SMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSW 453
Query: 386 SVLLGSCRKHGETRLA 401
S ++G+ HGE + A
Sbjct: 454 SSMIGAEGIHGEGKRA 469
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 148/309 (47%), Gaps = 35/309 (11%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPN--EPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
L +CA G ++ + +HE++ + + +D+ V L++M+A+ G L AR +FD +
Sbjct: 277 LLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGV 336
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-------YFFPNEFSLASVLISCDYL- 120
+NVV W+A+I+GY Q EE RLF +L PN +L SV+ +C L
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396
Query: 121 ---HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENME--FRNVISWNS 173
++H A+ LD +A+ALI+M +K C D +VF M+ R V+SW+S
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAK-CGDIEHGRQVFSEMDESTRTVVSWSS 455
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVT 231
MI A +A+ELF++M+ G P+ T+ VL AC AGLV
Sbjct: 456 MIGAEGIHGEGKRALELFSEMRT-------------GGYEPNEITYISVLSACSHAGLV- 501
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILK 290
E+ S +S+ YG L+ R G + + V M DL W S+L
Sbjct: 502 EQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLA 561
Query: 291 AYALHGQAK 299
A LHG K
Sbjct: 562 ACHLHGNCK 570
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 36/273 (13%)
Query: 162 NMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSI 221
++ ++ WNS+IA +N + AL F ++Q + + TF
Sbjct: 12 SISHKDTFHWNSLIAK--------------NATQNPQTALTFFTRMQAHAVPSNNFTFPA 57
Query: 222 VLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH- 280
+LKACA L VH+ + + G D A AL+ AY +CG + QVFD+M
Sbjct: 58 LLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS 117
Query: 281 -DLVSWNSILKAYALHGQAKEALQLFSNMN----------VQPDSATFVSLLSACS---H 326
D+VSW +++ AY+ +G EA + F M D + +L+SAC+
Sbjct: 118 VDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCG 177
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP-DSVIW 385
+ ++ G+ V H ++ +G MV + + A ++ +P+E D V W
Sbjct: 178 SNCLRRGSAV-HGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSW 236
Query: 386 SVLLGSCRKHGETRLA-----ELAATKLKQLEP 413
+ L+ +GE A ++ + +EP
Sbjct: 237 NSLISGFTLNGEAERALRTFEDMVSEGTSAVEP 269
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,994,209,429
Number of Sequences: 23463169
Number of extensions: 361073001
Number of successful extensions: 1302366
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7298
Number of HSP's successfully gapped in prelim test: 4286
Number of HSP's that attempted gapping in prelim test: 1116861
Number of HSP's gapped (non-prelim): 52038
length of query: 589
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 441
effective length of database: 8,886,646,355
effective search space: 3919011042555
effective search space used: 3919011042555
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)