BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043490
(589 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/571 (48%), Positives = 381/571 (66%), Gaps = 40/571 (7%)
Query: 42 LFVTNHLINMYAKF---GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
++V N +I+MY + +A +F+ + +N+V+W ++I+ + ++ +F
Sbjct: 192 IYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVF-- 249
Query: 99 LLQYFFPNEFSLASVLISCDYLHGK-------------LVHALALKFSLDAHVYVANALI 145
+ + F A++L C L+ +H+L +K L VA ALI
Sbjct: 250 MRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALI 309
Query: 146 NMYSKSCAD--EAWKVFENMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
+YS+ D + +K+F M R++++WN +I AF + + E A+
Sbjct: 310 KVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAF--------------AVYDPERAIH 355
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
LF QL++E ++PDW TFS VLKACAGLVT RHA ++H+ + K GF DTV+ N+LIHAYA
Sbjct: 356 LFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYA 415
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLS 322
+CGS+ L +VFD M D+VSWNS+LKAY+LHGQ L +F M++ PDSATF++LLS
Sbjct: 416 KCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLS 475
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDS 382
ACSHAG V+EG ++F SM E +PQL+HYAC++D+L R R EAE++I++MPM+PD+
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 383 VIWSVLLGSCRKHGETRLAELAATKLKQL-EPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
V+W LLGSCRKHG TRL +LAA KLK+L EP +S+ ++QMSNIY GSFN+A L KE
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKE 595
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET-SL 500
M+ RVRK P LSW EI N+VHEFASGG+ P +EA++++L+ LI LK MGYVPE S
Sbjct: 596 METWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSA 655
Query: 501 ALHDIEEEHKEEQLYHHSEKLALVFAIM--NQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
+ +EE +E+ L HHSEKLAL FA+M + S C ++I+IMKN RIC+DCHNFMKL
Sbjct: 656 SQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDC-GVNLIQIMKNTRICIDCHNFMKL 714
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
AS LLGKEI++RDSNRFHHFKD CSCNDYW
Sbjct: 715 ASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 229/416 (55%), Gaps = 39/416 (9%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
L S Q YA LF ACA N+ + LH HM+++ Q++ + N LINMYAK G + A
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH 121
R +FD MP+RNVVSWTALI+GY Q GN +E F LF S+L + FPNEF+L+SVL SC Y
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP 175
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK----SCADEAWKVFENMEFRNVISWNSMIAA 177
GK VH LALK L +YVANA+I+MY + + A EAW VFE ++F+N+++WNSMIAA
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLV------- 230
F+ C L +AI +F +M + +G+ D T +L C+ L
Sbjct: 236 FQCCNLGKKAIGVFMRMHS-------------DGVGFDRAT---LLNICSSLYKSSDLVP 279
Query: 231 --TERHASAVHSLIAKYGFEDDTVIANALIHAYAR-CGSISLSKQVFDKMTY-HDLVSWN 286
+ +HSL K G T +A ALI Y+ + ++F +M++ D+V+WN
Sbjct: 280 NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWN 339
Query: 287 SILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV-FHSMLE 342
I+ A+A++ + A+ LF + + PD TF S+L AC AGLV + + H+ +
Sbjct: 340 GIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVI 396
Query: 343 NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
G + ++ + G + ++ +M D V W+ +L + HG+
Sbjct: 397 KGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQV 451
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
++++ ACA + A+ +H +I D + N LI+ YAK G LD +FD+
Sbjct: 372 FSSVLKACAGLVTARHALSIHAQVIKG--GFLADTVLNNSLIHAYAKCGSLDLCMRVFDD 429
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDY 119
M R+VVSW +++ Y+ HG + +F + P+ + ++L +C +
Sbjct: 430 MDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM--DINPDSATFIALLSACSH 479
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/593 (39%), Positives = 362/593 (61%), Gaps = 29/593 (4%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
+ Y TL C + + Q +H H++ + D+ + N L+NMYAK G L++AR +F
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIFR--HDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH--- 121
++MP+R+ V+WT LISGY+QH + F +L++ + PNEF+L+SV+ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
G +H +K D++V+V +AL+++Y++ D+A VF+ +E RN +SWN++IA
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH- 237
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A+ E+AL LF+ + R+G P +++ + AC+ VH
Sbjct: 238 ------------ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVH 285
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + K G + N L+ YA+ GSI ++++FD++ D+VSWNS+L AYA HG K
Sbjct: 286 AYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGK 345
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
EA+ F M ++P+ +F+S+L+ACSH+GL+ EG ++ +++ G+VP+ HY +
Sbjct: 346 EAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTV 404
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + A + I EMP+EP + IW LL +CR H T L AA + +L+P D
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 464
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
V + NIY G +N A +RK+MK S V+K P SW+EIEN +H F + +RHPQRE
Sbjct: 465 GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQRE 524
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I +K EE++ ++K +GYVP+TS + ++++ +E L +HSEK+AL FA++N
Sbjct: 525 EIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPP---- 580
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S I I KNIR+C DCH +KLAS ++G+EI+VRD+NRFHHFKD CSC DYW
Sbjct: 581 GSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/596 (39%), Positives = 352/596 (59%), Gaps = 31/596 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
S + +A + C L G +K+ + + N +D+ N +I YA+ G +D+
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN-VRDVVSWNTIITGYAQSGKIDE 268
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL 120
AR LFDE P ++V +WTA++SGY Q+ EE LF + + NE S ++L Y+
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER---NEVSWNAMLAG--YV 323
Query: 121 HGKLVHALALKFSLDA--HVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIA 176
G+ + F + +V N +I Y++ C EA +F+ M R+ +SW +MIA
Sbjct: 324 QGERMEMAKELFDVMPCRNVSTWNTMITGYAQ-CGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ +Q+ F EAL LF Q++REG + +FS L CA +V
Sbjct: 383 GY------SQSGHSF-------EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGK 429
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+H + K G+E + NAL+ Y +CGSI + +F +M D+VSWN+++ Y+ HG
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+ AL+ F +M ++PD AT V++LSACSH GLV +G + F++M +++GV+P HY
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHY 549
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
ACMVDLLGR G + +A L++ MP EPD+ IW LLG+ R HG T LAE AA K+ +EP
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+S +V +SN+Y SG + +R M+ V+K PG SWIEI+N+ H F+ G + HP
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHP 669
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+++ IF LEEL ++K GYV +TS+ LHD+EEE KE + +HSE+LA+ + IM S
Sbjct: 670 EKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSS- 728
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN+R+C DCHN +K + + G+ I++RD+NRFHHFKD CSC DYW
Sbjct: 729 ---GRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 195/415 (46%), Gaps = 62/415 (14%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTAL 79
N+ +A +L E M +D+ N +++ YA+ G +DDAR +FD MP++N VSW AL
Sbjct: 141 NLGKARELFEIM------PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 80 ISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHG------KLVHALALKFS 133
+S Y Q+ EE LF S + L+S + L G K+V A S
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENW----------ALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 134 LDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
++ V+ N +I Y++S DEA ++F+ ++V +W +M++ + ++ +A ELF
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 192 AKMKNEEEA-----LFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYG 246
KM E L + Q +R MA + F ++ C + T
Sbjct: 305 DKMPERNEVSWNAMLAGYVQGERMEMAKE--LFDVM--PCRNVST--------------- 345
Query: 247 FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS 306
N +I YA+CG IS +K +FDKM D VSW +++ Y+ G + EAL+LF
Sbjct: 346 -------WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 307 NMNVQP---DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
M + + ++F S LS C+ ++ G K H L G ++ + +
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELG-KQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 364 GRILEAEKLIREMPMEPDSVIWSVLLGSCRKH--GETRLAELAATKLKQLEPGDS 416
G I EA L +EM + D V W+ ++ +H GE L + K + L+P D+
Sbjct: 458 GSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 173/420 (41%), Gaps = 95/420 (22%)
Query: 13 HACALHGNIKQAMQLHEHMINNFPNEP------QDLFVTNHLINMYAKFGYLDDARHLFD 66
H A ++K+A Q I +P D+ N I+ Y + G ++A +F
Sbjct: 32 HGAANFHSLKRATQTQ---IQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFK 88
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVH 126
MP+ + VS+ +ISGY ++G E +LF + + + +V+I + L
Sbjct: 89 RMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPE----RDLVSWNVMIKGYVRNRNLGK 144
Query: 127 ALAL-KFSLDAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
A L + + V N +++ Y+++ C D+A VF+ M +N +SWN++++A
Sbjct: 145 ARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA------- 197
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ + EEA LF+ + +W S
Sbjct: 198 ------YVQNSKMEEACMLFKSRE------NWALVSW----------------------- 222
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
N L+ + + I ++Q FD M D+VSWN+I+ YA G+ EA QL
Sbjct: 223 ----------NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 305 FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENH-------------------- 344
F VQ D T+ +++S +V+E ++F M E +
Sbjct: 273 FDESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMA 331
Query: 345 ----GVVP--QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
V+P + + M+ + G+I EA+ L +MP + D V W+ ++ + G +
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHS 390
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/601 (37%), Positives = 342/601 (56%), Gaps = 34/601 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S Q Y L C ++ A+++H H+++N QD F+ LI MY+ G +D AR
Sbjct: 76 SQQTYELLILCCGHRSSLSDALRVHRHILDN--GSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 64 LFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNE-FSLASVLISC----- 117
+FD+ KR + W AL G+ EE L+ + + ++ F+ VL +C
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 118 ---DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
+ GK +HA + +HVY+ L++MY++ C D A VF M RNV+SW++
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM--APDWCTFSIVLKACAGLVT 231
MIA + AK EAL FR++ RE +P+ T VL+ACA L
Sbjct: 254 MIACY-------------AKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+H I + G + + +AL+ Y RCG + + ++VFD+M D+VSWNS++ +
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
Y +HG K+A+Q+F M P TFVS+L ACSH GLV+EG ++F +M +HG+ P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
Q++HYACMVDLLGR R+ EA K++++M EP +W LLGSCR HG LAE A+ +L
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
LEP ++ +V +++IY + +++ + ++K ++ ++K PG W+E+ +++ F S
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSV 540
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
+ +P E I L +L +K GY+P+T L+++E E KE + HSEKLAL F ++
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLI 600
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
N + IRI KN+R+C DCH F K S + KEI+VRD NRFH FK+ +CSC DY
Sbjct: 601 NTS----KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDY 656
Query: 589 W 589
W
Sbjct: 657 W 657
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 8/200 (4%)
Query: 204 FRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYAR 263
R L +E +P T+ +++ C + A VH I G + D +A LI Y+
Sbjct: 66 IRVLSQES-SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSD 124
Query: 264 CGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSL 320
GS+ +++VFDK + WN++ +A L G +E L L+ MN V+ D T+ +
Sbjct: 125 LGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 321 LSACSHAGLVQE---GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
L AC + K H+ L G + +VD+ R G + A + MP
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 378 MEPDSVIWSVLLGSCRKHGE 397
+ + V WS ++ K+G+
Sbjct: 245 VR-NVVSWSAMIACYAKNGK 263
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 352/588 (59%), Gaps = 27/588 (4%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y+ L C + + + + H+ N + P +F+ N LINMY KF L+DA LFD+
Sbjct: 64 YSELIKCCISNRAVHEGNLICRHLYFN-GHRPM-MFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHG-KLV 125
MP+RNV+SWT +IS Y++ ++ L +L+ PN ++ +SVL SC+ + +++
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H +K L++ V+V +ALI++++K ++A VF+ M + I WNS+I F
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF------ 235
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
A+ + AL LF++++R G + T + VL+AC GL H I K
Sbjct: 236 -------AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
Y + D ++ NAL+ Y +CGS+ + +VF++M D+++W++++ A +G ++EAL+L
Sbjct: 289 Y--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M +P+ T V +L ACSHAGL+++G F SM + +G+ P +HY CM+DLLG
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
+ G++ +A KL+ EM EPD+V W LLG+CR LAE AA K+ L+P D+ +
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY S ++ IR M+ ++K PG SWIE+ ++H F G HPQ + KK
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKK 526
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L +LI +L G+GYVPET+ L D+E E E+ L HHSEKLAL F +M +L E+ VIR
Sbjct: 527 LNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM---TLPIEK-VIR 582
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I KN+RIC DCH F KLAS L + IV+RD R+HHF+D CSC DYW
Sbjct: 583 IRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 36/224 (16%)
Query: 195 KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH--SLIAKY----GFE 248
++ A+ LQ G+ D T+S ++K C ++ R AVH +LI ++ G
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCC---ISNR---AVHEGNLICRHLYFNGHR 93
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA---LHGQAKEALQLF 305
+ N LI+ Y + ++ + Q+FD+M +++SW +++ AY+ +H +A E L L
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 306 SNMNVQPDSATFVSLLSACS--------HAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
NV+P+ T+ S+L +C+ H G+++EG LE+ V + ++
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG-------LESDVFV-----RSALI 201
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D+ ++G +A + EM + D+++W+ ++G ++ + +A
Sbjct: 202 DVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/595 (37%), Positives = 350/595 (58%), Gaps = 34/595 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINN--FPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
Y L +AC ++ ++H HMI P ++ L+ Y K L+DAR +
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPAT----YLRTRLLIFYGKCDCLEDARKVL 110
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHG-- 122
DEMP++NVVSWTA+IS Y+Q G++ E +F +++ PNEF+ A+VL SC G
Sbjct: 111 DEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLG 170
Query: 123 --KLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFR 179
K +H L +K++ D+H++V ++L++MY+K+ EA ++FE + R+V+S ++IA +
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGY- 229
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
A++ +EEAL +F +L EGM+P++ T++ +L A +GL H H
Sbjct: 230 ------------AQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + V+ N+LI Y++CG++S ++++FD M +SWN++L Y+ HG +
Sbjct: 278 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 300 EALQLFSNMN----VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLEN-HGVVPQLDHYA 354
E L+LF M V+PD+ T +++LS CSH + G +F M+ +G P +HY
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYG 397
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG 414
C+VD+LGR GRI EA + I+ MP +P + + LLG+CR H + E +L ++EP
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE 457
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQ 474
++ +V +SN+Y +G + +R M V K PG SWI+ E +H F + + HP+
Sbjct: 458 NAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPR 517
Query: 475 REAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLC 534
RE + K++E+ ++K GYVP+ S L+D++EE KE+ L HSEKLAL F ++ G
Sbjct: 518 REEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATG--- 574
Query: 535 RERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E IR+ KN+RICVDCHNF K+ S + +E+ +RD NRFH D ICSC DYW
Sbjct: 575 -EGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 341/563 (60%), Gaps = 32/563 (5%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
E ++FV + L++MY KFG +A+ + D + +++VV TALI GY+Q G E + F
Sbjct: 197 EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 256
Query: 98 SLL-QYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-S 151
S+L + PNE++ ASVLISC D +GKL+H L +K ++ + +L+ MY + S
Sbjct: 257 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D++ +VF+ +E+ N +SW S+I+ + EE AL FR++ R+
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGL-------------VQNGREEMALIEFRKMMRDS 363
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ P+ T S L+ C+ L +H ++ KYGF+ D + LI Y +CG +++
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAG 328
VFD ++ D++S N+++ +YA +G +EAL LF N+ +QP+ T +S+L AC+++
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV+EG ++F S ++ ++ DHYACMVDLLGR GR+ EAE L E+ + PD V+W L
Sbjct: 484 LVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTL 541
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +C+ H + +AE K+ ++EPGD + MSN+Y +G +N+ ++ +MK +++
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK 601
Query: 449 KYPGLSWIEIENRVHEFASGGK-RHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEE 507
K P +SW+EI H F +G HP E I + LEELI + K +GYV + S D+EE
Sbjct: 602 KNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEE 661
Query: 508 EHKEEQLYHHSEKLALVFAI-MNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKE 566
KE L+ HSEKLA+ FA+ N G IRI+KN+R+CVDCH+++K+ S ++ +E
Sbjct: 662 TAKERSLHQHSEKLAIAFAVWRNVG------GSIRILKNLRVCVDCHSWIKIVSRVMKRE 715
Query: 567 IVVRDSNRFHHFKDRICSCNDYW 589
I+ RDS RFHHF+D CSC DYW
Sbjct: 716 IICRDSKRFHHFRDGSCSCGDYW 738
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 203/413 (49%), Gaps = 34/413 (8%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDD 60
L +T ++ L C +I + HM+ + FP E + L++ K G +D
Sbjct: 62 LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE----ISGSKLVDASLKCGDIDY 117
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDY 119
AR +FD M +R++V+W +LI+ +H ++E ++ + P+E++L+SV +
Sbjct: 118 ARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSD 177
Query: 120 L----HGKLVHALALKFSLD-AHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNS 173
L + H LA+ L+ ++V+V +AL++MY K EA V + +E ++V+ +
Sbjct: 178 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 237
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+I +++ + EA+ F+ + E + P+ T++ VL +C L
Sbjct: 238 LIVG-------------YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIG 284
Query: 234 HASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+ +H L+ K GFE +L+ Y RC + S +VF + Y + VSW S++
Sbjct: 285 NGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLV 344
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+G+ + AL F M +++P+S T S L CS+ + +EG ++ H ++ +G
Sbjct: 345 QNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI-HGIVTKYGF--DR 401
Query: 351 DHYA--CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D YA ++DL G+ G + +L+ + E D + + ++ S ++G R A
Sbjct: 402 DKYAGSGLIDLYGKCG-CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 453
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/588 (38%), Positives = 344/588 (58%), Gaps = 28/588 (4%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ CA +G + +A H +I + D+ + N LIN Y+K G+++ AR +FD M +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIR--IDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE 124
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFSLASVL----ISCDYLHGKLV 125
R++VSW +I Y ++ E +F + F +EF+++SVL ++CD L K +
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H L++K +D ++YV AL+++Y+K +A +VFE+M+ ++ ++W+SM+A +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY------ 238
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ KN EEAL L+R+ QR + + T S V+ AC+ L +H++I K
Sbjct: 239 -------VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GF + +A++ + YA+CGS+ S +F ++ +L WN+I+ +A H + KE + L
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M + P+ TF SLLS C H GLV+EG + F M +G+ P + HY+CMVD+LG
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQ 421
R G + EA +LI+ +P +P + IW LL SCR + LAE+AA KL +LEP ++ V
Sbjct: 412 RAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVL 471
Query: 422 MSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKK 481
+SNIY + + + RK ++ V+K G SWI+I+++VH F+ G HP+ I
Sbjct: 472 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 531
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
L+ L+ + + GY P LHD+E KEE L HSEKLALVF +M E S +R
Sbjct: 532 LDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLM----CLPESSPVR 587
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IMKN+RICVDCH FMK AS + I+VRD NRFHHF D CSC D+W
Sbjct: 588 IMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/669 (34%), Positives = 355/669 (53%), Gaps = 100/669 (14%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
+ + + LF CA K Q+H ++ D FV + +MY + G + D
Sbjct: 112 LIPDSHVLPNLFKVCAELSAFKVGKQIH--CVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY------------------ 102
AR +FD M ++VV+ +AL+ YA+ G EE R+ +
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 103 ------------------FFPNEFSLASVLISC---DYLH-GKLVHALALKFSLDAHVYV 140
F P++ +++SVL S + L+ G+L+H +K L V
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289
Query: 141 ANALINMYSKS--------------------------------CADEAWKVFE-----NM 163
+A+I+MY KS D+A ++FE M
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTM 349
Query: 164 EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVL 223
E NV+SW S+IA C + IE AL LFR++Q G+ P+ T +L
Sbjct: 350 EL-NVVSWTSIIAG---CAQNGKDIE----------ALELFREMQVAGVKPNHVTIPSML 395
Query: 224 KACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLV 283
AC + H + H + D+ + +ALI YA+CG I+LS+ VF+ M +LV
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 284 SWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
WNS++ +++HG+AKE + +F ++ ++PD +F SLLSAC GL EG K F M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 341 LENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRL 400
E +G+ P+L+HY+CMV+LLGR G++ EA LI+EMP EPDS +W LL SCR L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 401 AELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN 460
AE+AA KL LEP + +V +SNIY G + + IR +M+ ++K PG SWI+++N
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 461 RVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEK 520
RV+ +G K HPQ + I +K++E+ +++ G+ P ALHD+EE+ +E+ L+ HSEK
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 521 LALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKD 580
LA+VF ++N + + ++++KN+RIC DCH +K S G+EI +RD+NRFHHFKD
Sbjct: 696 LAVVFGLLNT----PDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKD 751
Query: 581 RICSCNDYW 589
ICSC D+W
Sbjct: 752 GICSCGDFW 760
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 187/441 (42%), Gaps = 75/441 (17%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D +++ LI Y+ + +DA + +P + S+++LI + + +F +
Sbjct: 49 DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108
Query: 101 QY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-- 153
+ P+ L ++ C L GK +H ++ LD +V ++ +MY + C
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMR-CGRM 167
Query: 154 DEAWKVFENMEFRNVISWNSMIAAF--RAC---------KLEAQAIEL-----------F 191
+A KVF+ M ++V++ ++++ A+ + C ++E+ IE F
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+ +EA+ +F+++ G PD T S VL + +H + K G D
Sbjct: 228 NRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK 287
Query: 252 VIANALIHAYARCGSI-----------------------SLSK-----------QVFDKM 277
+ +A+I Y + G + LS+ ++F +
Sbjct: 288 CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQ 347
Query: 278 TYH-DLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
T ++VSW SI+ A +G+ EAL+LF M V+P+ T S+L AC + + G
Sbjct: 348 TMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG 407
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+ H ++ + + ++D+ + GRI ++ + MP + + V W+ L+
Sbjct: 408 RSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFS 465
Query: 394 KHGETR-----LAELAATKLK 409
HG+ + L T+LK
Sbjct: 466 MHGKAKEVMSIFESLMRTRLK 486
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 137/345 (39%), Gaps = 87/345 (25%)
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
HA LK Y++ LI YS +C ++A V +++ + S++S+I A KL
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
Q+I +F++M + G+ PD + K CA L + +H +
Sbjct: 98 TQSIGVFSRMFSH-------------GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCV 144
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHD----------------------- 281
G + D + ++ H Y RCG + +++VFD+M+ D
Sbjct: 145 SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRI 204
Query: 282 ------------LVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSH 326
+VSWN IL + G KEA+ +F ++ PD T S+L +
Sbjct: 205 LSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD 264
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRI-------------------- 366
+ ++ G ++ H + G++ + M+D+ G+ G +
Sbjct: 265 SEMLNMG-RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 367 --------------LEAEKLIREMPMEPDSVIWSVLLGSCRKHGE 397
LE +L +E ME + V W+ ++ C ++G+
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/579 (38%), Positives = 345/579 (59%), Gaps = 36/579 (6%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G I A +L+E + + +D +I+ K G +D+AR +FDEM +R+V++WT
Sbjct: 155 GRIDDACKLYEMIPD------KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 79 LISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYL-HGKLVHALALKFSLDAH 137
+++GY Q+ ++ ++F + + E S S+L+ Y+ +G++ A L +
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPE---KTEVSWTSMLMG--YVQNGRIEDAEELFEVMPVK 263
Query: 138 VYVA-NALIN-MYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMK 195
+A NA+I+ + K +A +VF++M+ RN SW ++I E EL
Sbjct: 264 PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH-----ERNGFEL----- 313
Query: 196 NEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL LF +Q++G+ P + T +L CA L + H VH+ + + F+ D +A+
Sbjct: 314 ---EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVAS 370
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQ 311
L+ Y +CG + SK +FD+ D++ WNSI+ YA HG +EAL++F M + +
Sbjct: 371 VLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTK 430
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
P+ TFV+ LSACS+AG+V+EG K++ SM GV P HYACMVD+LGR GR EA +
Sbjct: 431 PNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAME 490
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGS 431
+I M +EPD+ +W LLG+CR H + +AE A KL ++EP +S ++ +SN+Y G
Sbjct: 491 MIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGR 550
Query: 432 FNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG-KRHPQREAIFKKLEELIGQLK 490
+ +RK MK VRK PG SW E+EN+VH F GG HP++E+I K L+EL G L+
Sbjct: 551 WADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLR 610
Query: 491 GMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICV 550
GY P+ S ALHD++EE K L +HSE+LA+ +A++ E IR+MKN+R+C
Sbjct: 611 EAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLK----LSEGIPIRVMKNLRVCS 666
Query: 551 DCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
DCH +K+ S + +EI++RD+NRFHHF++ CSC DYW
Sbjct: 667 DCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 171/374 (45%), Gaps = 40/374 (10%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
+ + P+ +++ N L++ Y K G +D+AR +FD MP+RNVVSWTAL+ GY +G +
Sbjct: 70 LFDEMPD--RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVD 127
Query: 91 ECFRLFCSLLQYFFPNEFSLASVLISCDYLH-GKLVHALAL-KFSLDAHVYVANALINMY 148
LF + + N+ S +LI +L G++ A L + D ++I+
Sbjct: 128 VAESLFWKMPE---KNKVSWTVMLIG--FLQDGRIDDACKLYEMIPDKDNIARTSMIHGL 182
Query: 149 SKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K DEA ++F+ M R+VI+W +M+ + A ++F M + E
Sbjct: 183 CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV------- 235
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSI 267
W + + G V L + + NA+I + G I
Sbjct: 236 -------SWTSMLM------GYVQNGRIEDAEELFEVMPVK-PVIACNAMISGLGQKGEI 281
Query: 268 SLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSAC 324
+ +++VFD M + SW +++K + +G EAL LF M V+P T +S+LS C
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEAEKLIREMPMEPDS 382
+ + G +V ++ +D Y + ++ + + G +++++ + P + D
Sbjct: 342 ASLASLHHGKQVHAQLVRCQF---DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK-DI 397
Query: 383 VIWSVLLGSCRKHG 396
++W+ ++ HG
Sbjct: 398 IMWNSIISGYASHG 411
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 147/358 (41%), Gaps = 71/358 (19%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF 103
N I ++ G + +AR LFD +++ SW ++++GY + + +LF +
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 104 FPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFEN 162
D ++ N L++ Y K+ DEA KVF+
Sbjct: 75 ------------------------------PDRNIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 163 MEFRNVISWNSMIAAFRACKLEAQAIELFAKM--KNEEEALFLFRQLQREGMAPDWCTFS 220
M RNV+SW +++ + A LF KM KN+ + ++G D C
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL- 163
Query: 221 IVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH 280
+ +I + D + ++IH + G + ++++FD+M+
Sbjct: 164 ------------------YEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 281 DLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSM 340
+++W +++ Y + + +A ++F M + ++ S+L G +++ ++F
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAEELFE-- 258
Query: 341 LENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
V+P AC M+ LG+ G I +A ++ M E + W ++ ++G
Sbjct: 259 -----VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVIKIHERNG 310
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA K+F++ + +++ SWNSM+A + A + A +LF +M + + G+
Sbjct: 35 EARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN-------IISWNGLVS 87
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
+ G + E A V L+ E + V AL+ Y G + +++ +F
Sbjct: 88 GYMK--------NGEIDE--ARKVFDLMP----ERNVVSWTALVKGYVHNGKVDVAESLF 133
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGN 334
KM + VSW +L + G+ +A +L+ M D+ S++ G V E
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
++F M E + + MV G+ R+ +A K+ MP E V W+ +L +
Sbjct: 193 EIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQ 246
Query: 395 HGETRLAE 402
+G AE
Sbjct: 247 NGRIEDAE 254
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
AN I +R G I ++++FD + SWNS++ Y + ++A +LF M PD
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---PD 76
Query: 314 S--ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEK 371
++ L+S G + E KVF M E + V + +V G++ AE
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV-----SWTALVKGYVHNGKVDVAES 131
Query: 372 LIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPG-DSLGFVQMSNIYCLSG 430
L +MP E + V W+V+L + G R+ + A KL ++ P D++ M + C G
Sbjct: 132 LFWKMP-EKNKVSWTVMLIGFLQDG--RIDD--ACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 431 SFNKARLIRKEM 442
++AR I EM
Sbjct: 187 RVDEAREIFDEM 198
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 336/593 (56%), Gaps = 35/593 (5%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
AC+ +I Q H+ D+FV++ LI MY+ G L+DAR +FDE+PKRN+
Sbjct: 85 ACSSLFDIFSGKQTHQQAF--VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLL-------QYFFPNEFSLASVLISCDYLHGK--- 123
VSWT++I GY +GNA + LF LL F + L SV+ +C + K
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 124 -LVHALALKFSLDAHVYVANALINMYSKSCADE---AWKVFENMEFRNVISWNSMIAAFR 179
+H+ +K D V V N L++ Y+K A K+F+ + ++ +S+NS+++ +
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ +A E+F ++ + F + T S VL A + R +H
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTF------------NAITLSTVLLAVSHSGALRIGKCIH 310
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + G EDD ++ ++I Y +CG + +++ FD+M ++ SW +++ Y +HG A
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL+LF M V+P+ TFVS+L+ACSHAGL EG + F++M GV P L+HY CM
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCM 430
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDLLGR G + +A LI+ M M+PDS+IWS LL +CR H LAE++ +L +L+ +
Sbjct: 431 VDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNC 490
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
++ +S+IY +G + +R MK + K PG S +E+ VH F G + HPQRE
Sbjct: 491 GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I++ L EL +L GYV TS HD++EE KE L HSEKLA+ F IMN
Sbjct: 551 KIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT----VP 606
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + ++KN+R+C DCHN +KL S ++ +E VVRD+ RFHHFKD CSC DYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 171/346 (49%), Gaps = 31/346 (8%)
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC----DYLHG 122
+ K +V SW ++I+ A+ G++ E F S+ + +P S + +C D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
K H A F + ++V++ALI MYS +C ++A KVF+ + RN++SW SMI +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYS-TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 181 CKLEAQAIELFAKM----KNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
A+ LF + ++++A+FL D V+ AC+ + +
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFL-----------DSMGLVSVISACSRVPAKGLTE 203
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARC--GSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
++HS + K GF+ + N L+ AYA+ G +++++++FD++ D VS+NSI+ YA
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 295 HGQAKEALQLF----SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
G + EA ++F N V ++ T ++L A SH+G ++ G K H + G+ +
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDV 322
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++D+ + GR+ A K M + W+ ++ HG
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 343/592 (57%), Gaps = 18/592 (3%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+++ AC+ ++ +LH + + N + ++ FV + L++MY + R +FD M
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLD-ENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHG 122
R + W A+I+GY+Q+ + +E LF + + N ++A V+ +C +
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H +K LD +V N L++MYS+ D A ++F ME R++++WN+MI +
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ A+ L KM+N E + + R + P+ T +L +CA L +H+
Sbjct: 485 EHHEDALLLLHKMQNLERKVS--KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K D + +AL+ YA+CG + +S++VFD++ ++++WN I+ AY +HG +EA
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 302 LQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
+ L M VQ P+ TF+S+ +ACSH+G+V EG ++F+ M ++GV P DHYAC+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 359 LLGRVGRILEAEKLIREMPMEPDSV-IWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
LLGR GRI EA +L+ MP + + WS LLG+ R H + E+AA L QLEP +
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V ++NIY +G ++KA +R+ MK VRK PG SWIE + VH+F +G HPQ E
Sbjct: 723 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 782
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
+ LE L +++ GYVP+TS LH++EE+ KE L HSEKLA+ F I+N
Sbjct: 783 LSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP----G 838
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++IR+ KN+R+C DCH K S ++ +EI++RD RFH FK+ CSC DYW
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 190/400 (47%), Gaps = 39/400 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ L A A +++ Q+H H + F + V N L+N+Y K G +FD
Sbjct: 100 FPALLKAVADLQDMELGKQIHAH-VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 68 MPKRNVVSWTALIS---GYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLH--- 121
+ +RN VSW +LIS + + A E FR C L + P+ F+L SV+ +C L
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFR--CMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 122 ----GKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKV-FENMEFRNVISWNSMIA 176
GK VHA L+ + + ++ N L+ MY K + KV + R++++WN++++
Sbjct: 217 GLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 177 AFRACKLEAQAIELFAKMKNEE--EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
+ C +NE+ EAL R++ EG+ PD T S VL AC+ L R
Sbjct: 276 SL--C-------------QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 235 ASAVHSLIAKYG-FEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+H+ K G ++++ + +AL+ Y C + ++VFD M + WN+++ Y+
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 294 LHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ KEAL LF M + +S T ++ AC +G + H + G+
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRD 439
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++D+ R+G+I A ++ +M + D V W+ ++
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 14/202 (6%)
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANAL 257
EA+ + + G+ PD F +LKA A L +H+ + K+G+ D+V +AN L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDS 314
++ Y +CG +VFD+++ + VSWNS++ + + + AL+ F M NV+P S
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 315 ATFVSLLSACSHAGLVQEG---NKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEA 369
T VS+++ACS+ + EG K H+ G +L+ + +V + G++G++ +
Sbjct: 200 FTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKG---ELNSFIINTLVAMYGKLGKLASS 255
Query: 370 EKLIREMPMEPDSVIWSVLLGS 391
+ L+ D V W+ +L S
Sbjct: 256 KVLLGSFGGR-DLVTWNTVLSS 276
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 330/557 (59%), Gaps = 31/557 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
+V I++Y+K G + LF E K ++V++ A+I GY +G E LF L+
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-- 314
Query: 103 FFPNEFSLASVLISCDYLHGKL-----VHALALKFSLDAHVYVANALINMYSK-SCADEA 156
+S L+S + G L +H LK + +H V+ AL +YSK + + A
Sbjct: 315 -LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
K+F+ +++ SWN+MI+ + L E+A+ LFR++Q+ +P+
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLT-------------EDAISLFREMQKSEFSPNP 420
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T + +L ACA L VH L+ FE ++ ALI YA+CGSI+ ++++FD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
MT + V+WN+++ Y LHGQ +EAL +F M + P TF+ +L ACSHAGLV+EG
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+++F+SM+ +G P + HYACMVD+LGR G + A + I M +EP S +W LLG+CR
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 394 KHGETRLAELAATKLKQLEPGDSLGF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPG 452
H +T LA + KL +L+P D++G+ V +SNI+ ++ +A +R+ K ++ K PG
Sbjct: 601 IHKDTNLARTVSEKLFELDP-DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 453 LSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEE 512
+ IEI H F SG + HPQ + I++KLE+L G+++ GY PET LALHD+EEE +E
Sbjct: 660 YTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEEREL 719
Query: 513 QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDS 572
+ HSE+LA+ F ++ + IRI+KN+R+C+DCH KL S + + IVVRD+
Sbjct: 720 MVKVHSERLAIAFGLIA----TEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDA 775
Query: 573 NRFHHFKDRICSCNDYW 589
NRFHHFKD +CSC DYW
Sbjct: 776 NRFHHFKDGVCSCGDYW 792
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 167/390 (42%), Gaps = 31/390 (7%)
Query: 20 NIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
+I Q H +I + F N D+ + L + G + AR +F + + +V +
Sbjct: 32 SISHLAQTHAQIILHGFRN---DISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 79 LISGYAQHGNAEECFRLFCSLLQY--FFPNEFSLASVLISC----DYLHGKLVHALALKF 132
L+ G++ + + +F L + PN + A + + D G+++H A+
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 133 SLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELF 191
D+ + + + ++ MY K ++A KVF+ M ++ I WN+MI+ +R ++ ++I++F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 192 AKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDT 251
+ NE D T +L A A L R +HSL K G
Sbjct: 209 RDLINESCTRL------------DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 252 VIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM--- 308
+ I Y++CG I + +F + D+V++N+++ Y +G+ + +L LF +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 309 NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILE 368
+ S+T VSL+ H L+ H + + + ++ I
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIY----AIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 369 AEKLIREMPMEPDSVIWSVLLGSCRKHGET 398
A KL E P E W+ ++ ++G T
Sbjct: 373 ARKLFDESP-EKSLPSWNAMISGYTQNGLT 401
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA G + +H+ ++ + E ++V+ LI MYAK G + +AR LFD M K
Sbjct: 426 ILSACAQLGALSLGKWVHD-LVRSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLV 125
+N V+W +ISGY HG +E +F +L P + VL +C H LV
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS--HAGLV 537
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 325/559 (58%), Gaps = 29/559 (5%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
F+ + L+ Y + G+ A LFDEMP+R++VSW +LISGY+ G +CF + ++
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 103 ---FFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
F PNE + S++ +C Y G+ +H L +KF + V V NA IN Y K+
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ K+FE++ +N++SWN+MI L E+ L F +R G P
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLA-------------EKGLAYFNMSRRVGHEP 233
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D TF VL++C + R A +H LI GF + I AL+ Y++ G + S VF
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
++T D ++W ++L AYA HG ++A++ F M + PD TF LL+ACSH+GLV+
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F +M + + + P+LDHY+CMVDLLGR G + +A LI+EMPMEP S +W LLG+
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
CR + +T+L AA +L +LEP D +V +SNIY SG + A IR MK + +
Sbjct: 414 CRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRAS 473
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKG-MGYVPETSLALHDIEEEHK 510
G S+IE N++H+F G HP+ E I KKL+E+ ++K MGY +T LHD+ E+ K
Sbjct: 474 GCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVK 533
Query: 511 EEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVR 570
EE + HSEK+A+ F ++ + E +IR KN+RIC DCH K S + + I++R
Sbjct: 534 EEMINQHSEKIAMAFGLLVVSPM--EPIIIR--KNLRICGDCHETAKAISLIEKRRIIIR 589
Query: 571 DSNRFHHFKDRICSCNDYW 589
DS RFHHF D CSC+DYW
Sbjct: 590 DSKRFHHFLDGSCSCSDYW 608
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 57/344 (16%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC G+ ++ +H ++ F +++ V N IN Y K G L + LF++
Sbjct: 137 FLSMISACVYGGSKEEGRCIHG-LVMKF-GVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----G 122
+ +N+VSW +I + Q+G AE+ F S P++ + +VL SC+ +
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H L + + + AL+++YSK +++ VF + + ++W +M+AA+
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVH 239
AI+ F M + G++PD TF+ +L AC +GLV E
Sbjct: 315 GFGRDAIKHFELMVH-------------YGISPDHVTFTHLLNACSHSGLVEE------- 354
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQV-FDKMTYHDLVSWNSILKAYALHGQA 298
K+ FE ++SK+ D H ++ ++ G
Sbjct: 355 ---GKHYFE-------------------TMSKRYRIDPRLDH----YSCMVDLLGRSGLL 388
Query: 299 KEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE 342
++A L M ++P S + +LL AC Q G K + E
Sbjct: 389 QDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFE 432
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/578 (37%), Positives = 333/578 (57%), Gaps = 29/578 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D FV ++MYA G ++ AR++FDEM R+VV+W +I Y + G +E F+LF +
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 101 QY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKS-CAD 154
P+E L +++ +C + + + ++ ++ + ++ AL+ MY+ + C D
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---------------- 198
A + F M RN+ +M++ + C A +F + + ++
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 199 --EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
EAL +F ++ G+ PD + V+ ACA L A VHS I G E + I NA
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
LI+ YA+CG + ++ VF+KM ++VSW+S++ A ++HG+A +AL LF+ M NV+P+
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
TFV +L CSH+GLV+EG K+F SM + + + P+L+HY CMVDL GR + EA ++I
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFN 433
MP+ + VIW L+ +CR HGE L + AA ++ +LEP V MSNIY +
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 434 KARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMG 493
R IR+ M+ V K GLS I+ + HEF G KRH Q I+ KL+E++ +LK G
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAG 624
Query: 494 YVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS--VIRIMKNIRICVD 551
YVP+ L D+EEE K++ + HSEKLAL F +MN+ + S VIRI+KN+R+C D
Sbjct: 625 YVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCED 684
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH F KL S + +EI+VRD RFH +K+ +CSC DYW
Sbjct: 685 CHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 42/302 (13%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF--- 96
++LFV+ +++ Y+K G LDDA+ +FD+ K+++V WT +IS Y + +E R+F
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 97 -CSLLQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSKS 151
CS ++ P+ S+ SV+ +C L K VH+ L++ + + NALINMY+K
Sbjct: 336 CCSGIK---PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKC 392
Query: 152 CA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
D VFE M RNV+SW+SMI A + A+ LFA+MK +E
Sbjct: 393 GGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMK-------------QE 439
Query: 211 GMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ P+ TF VL C +GLV E S+ +Y ++ + R +
Sbjct: 440 NVEPNEVTFVGVLYGCSHSGLV-EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLR 498
Query: 269 LSKQVFDKMTY-HDLVSWNSILKAYALHGQ-------AKEALQLFSNMNVQPDSATFVSL 320
+ +V + M ++V W S++ A +HG+ AK L+L +PD + L
Sbjct: 499 EALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL------EPDHDGALVL 552
Query: 321 LS 322
+S
Sbjct: 553 MS 554
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 196 NEEEALFLFRQLQRE-GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIA 254
+E A LF Q R G D +F +LKA + + +H + K D +
Sbjct: 90 SEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVE 149
Query: 255 NALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQ 311
+ YA CG I+ ++ VFD+M++ D+V+WN++++ Y G EA +LF M NV
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 312 PDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY--ACMVDLLGRVGRILEA 369
PD +++SAC G ++ ++ ++EN ++D + +V + G + A
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIEND---VRMDTHLLTALVTMYAGAGCMDMA 266
Query: 370 EKLIREMPMEPDSVIWSVLLGSCRKHGETRLAEL--AATKLKQLEPGDSLGFVQMSNIYC 427
+ R+M + ++ + + G ++ L A Q E D + + M + Y
Sbjct: 267 REFFRKMS------VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 428 LSGSFNKARLIRKEMKGSRVR 448
S +A + +EM S ++
Sbjct: 321 ESDYPQEALRVFEEMCCSGIK 341
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/601 (37%), Positives = 343/601 (57%), Gaps = 37/601 (6%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD 60
F+ I+ L A G++ A ++ + M N +DL N ++N YA+ G L++
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN------RDLCSWNVMVNGYAEVGLLEE 169
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYF---FPNEFSLA-----S 112
AR LFDEM +++ SWTA+++GY + EE L+ SL+Q PN F+++ +
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY-SLMQRVPNSRPNIFTVSIAVAAA 228
Query: 113 VLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
+ C GK +H ++ LD+ + ++L++MY K C DEA +F+ + ++V+SW
Sbjct: 229 AAVKC-IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSW 287
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
SMI + + K E LF +L P+ TF+ VL ACA L T
Sbjct: 288 TSMI-------------DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
E VH + + GF+ + +++L+ Y +CG+I +K V D DLVSW S++
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 292 YALHGQAKEALQLFS---NMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
A +GQ EAL+ F +PD TFV++LSAC+HAGLV++G + F+S+ E H +
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL 408
DHY C+VDLL R GR + + +I EMPM+P +W+ +LG C +G LAE AA +L
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514
Query: 409 KQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASG 468
++EP + + +V M+NIY +G + + +RK M+ V K PG SW EI+ + H F +
Sbjct: 515 FKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAA 574
Query: 469 GKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIM 528
HP I + L EL ++K GYVP TSL LHD+E+E KEE L +HSEKLA+ FAI+
Sbjct: 575 DTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAIL 634
Query: 529 NQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDY 588
+ E + I++ KN+R CVDCH +K S++ ++I VRDS RFH F++ CSC DY
Sbjct: 635 ST----EEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDY 690
Query: 589 W 589
W
Sbjct: 691 W 691
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 53/331 (16%)
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLE--AQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
K F + +F N + + R C+ +AI++ K EA+ QL P
Sbjct: 29 KRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAV----QLLGRAKKPP 84
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T+ +++ C+ VH I GF VI N L+ YA+CGS+ +++VFD
Sbjct: 85 ASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFD 144
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNK 335
+M DL SWN ++ YA G +EA +LF M + DS ++ ++++ +E
Sbjct: 145 EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM-TEKDSYSWTAMVTGYVKKDQPEEA-L 202
Query: 336 VFHSMLE--------------------------------NHGVVPQLDH----YACMVDL 359
V +S+++ H V LD ++ ++D+
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF 419
G+ G I EA + ++ +E D V W+ ++ K R ++L +G
Sbjct: 263 YGKCGCIDEARNIFDKI-VEKDVVSWTSMIDRYFKSSRWREGFSLFSEL--------VGS 313
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKY 450
+ N Y +G N + E G +V Y
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGY 344
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/591 (36%), Positives = 346/591 (58%), Gaps = 31/591 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEM 68
+ L A +L + + Q+H H I N D FV+ LI+ Y++ + +A LF E
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIK--INNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 477
Query: 69 PKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYL----HGK 123
++V+W A+++GY Q + + +LF + Q ++F+LA+V +C +L GK
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 124 LVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRAC 181
VHA A+K D ++V++ +++MY K C D A F+++ + ++W +MI+ C
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVK-CGDMSAAQFAFDSIPVPDDVAWTTMISG---C 593
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
+ EE A +F Q++ G+ PD T + + KA + L +H+
Sbjct: 594 IENGE----------EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
K +D + +L+ YA+CGSI + +F ++ ++ +WN++L A HG+ KE
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 302 LQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
LQLF M ++PD TF+ +LSACSH+GLV E K SM ++G+ P+++HY+C+ D
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLG 418
LGR G + +AE LI M ME + ++ LL +CR G+T + ATKL +LEP DS
Sbjct: 764 ALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 823
Query: 419 FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAI 478
+V +SN+Y + +++ +L R MKG +V+K PG SWIE++N++H F + + Q E I
Sbjct: 824 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Query: 479 FKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERS 538
++K++++I +K GYVPET L D+EEE KE LY+HSEKLA+ F +++ +
Sbjct: 884 YRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPP----ST 939
Query: 539 VIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
IR++KN+R+C DCHN MK + + +EIV+RD+NRFH FKD ICSC DYW
Sbjct: 940 PIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 186/369 (50%), Gaps = 28/369 (7%)
Query: 42 LFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
L V+N LINMY K AR +FD M +R+++SW ++I+G AQ+G E LF LL+
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 102 YFF-PNEFSLASVLISCDYLH-----GKLVHALALKFSLDAHVYVANALINMYSKS-CAD 154
P+++++ SVL + L K VH A+K + + +V+ ALI+ YS++ C
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
EA +FE F ++++WN+M+A + + ++LFA M ++G
Sbjct: 470 EAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALM-------------HKQGERS 515
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D T + V K C L VH+ K G++ D +++ ++ Y +CG +S ++ F
Sbjct: 516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQ 331
D + D V+W +++ +G+ + A +FS M V PD T +L A S ++
Sbjct: 576 DSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 635
Query: 332 EGNKVFHSMLE-NHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+G ++ + L+ N P + +VD+ + G I +A L + + M + W+ +L
Sbjct: 636 QGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLV 692
Query: 391 SCRKHGETR 399
+HGE +
Sbjct: 693 GLAQHGEGK 701
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 195/459 (42%), Gaps = 82/459 (17%)
Query: 32 INNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHG---- 87
I F P+ F+ N+LI+MY+K G L AR +FD+MP R++VSW ++++ YAQ
Sbjct: 65 ILTFEENPER-FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVV 123
Query: 88 -NAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYLHGKLV------HALALKFSLDAHVY 139
N ++ F LF L Q + + +L+ +L C LH V H A K LD +
Sbjct: 124 ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC--LHSGYVWASESFHGYACKIGLDGDEF 181
Query: 140 VANALINMYSKSCADEAWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKM---- 194
VA AL+N+Y K + KV FE M +R+V+ WN M+ A+ + +AI+L +
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 195 --KNEEEALFLFR---------QLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
NE L R Q++ D + S ++ GL H+ +L+
Sbjct: 242 LNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLK 301
Query: 244 KYG------FEDDTVIANALIHAYARCGSISLSKQ------------------------- 272
+ E D V ++ + S++L +Q
Sbjct: 302 CFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 361
Query: 273 ----------VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
VFD M+ DL+SWNS++ A +G EA+ LF + ++PD T S
Sbjct: 362 KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 320 LLSACSH--AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
+L A S GL H++ N+ V ++D R + EAE L
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINN--VSDSFVSTALIDAYSRNRCMKEAEILFERHN 479
Query: 378 MEPDSVIWSVLL-GSCRKHGETRLAELAATKLKQLEPGD 415
D V W+ ++ G + H + +L A KQ E D
Sbjct: 480 F--DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSD 516
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 12/212 (5%)
Query: 110 LASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L + + S D + GK HA L F + ++ N LI+MYSK + A +VF+ M R++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SWNS++AA+ AQ+ E ++N ++A LFR L+++ + T S +LK C
Sbjct: 106 VSWNSILAAY------AQSSECV--VENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLH 157
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
+ + H K G + D +A AL++ Y + G + K +F++M Y D+V WN +
Sbjct: 158 SGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLM 217
Query: 289 LKAYALHGQAKEALQL---FSNMNVQPDSATF 317
LKAY G +EA+ L F + + P+ T
Sbjct: 218 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
H+ I + + + N LI Y++CGS++ +++VFDKM DLVSWNSIL AYA +
Sbjct: 61 THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 298 A-----KEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
++A LF + V T +L C H+G V ++ FH G+
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW-ASESFHGYACKIGLDGD 179
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+V++ + G++ E + L EMP D V+W+++L
Sbjct: 180 EFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML 218
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/556 (38%), Positives = 325/556 (58%), Gaps = 29/556 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QY 102
++ L++MYAK G L+ AR LFD M +RNVVSW ++I Y Q+ N +E +F +L +
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 103 FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC--ADEA 156
P + S+ L +C D G+ +H L+++ LD +V V N+LI+MY K C D A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK-CKEVDTA 391
Query: 157 WKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDW 216
+F ++ R ++SWN+MI F A+ +AL F Q++ + PD
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGF-------------AQNGRPIDALNYFSQMRSRTVKPDT 438
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T+ V+ A A L HA +H ++ + + + + AL+ YA+CG+I +++ +FD
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 498
Query: 277 MTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEG 333
M+ + +WN+++ Y HG K AL+LF M ++P+ TF+S++SACSH+GLV+ G
Sbjct: 499 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
K F+ M EN+ + +DHY MVDLLGR GR+ EA I +MP++P ++ +LG+C+
Sbjct: 559 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Query: 394 KHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGL 453
H AE AA +L +L P D V ++NIY + + K +R M +RK PG
Sbjct: 619 IHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 678
Query: 454 SWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ 513
S +EI+N VH F SG HP + I+ LE+LI +K GYVP+T+L L +E + KE+
Sbjct: 679 SMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQL 737
Query: 514 LYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSN 573
L HSEKLA+ F ++N + + I + KN+R+C DCHN K S + G+EIVVRD
Sbjct: 738 LSTHSEKLAISFGLLNTTA----GTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQ 793
Query: 574 RFHHFKDRICSCNDYW 589
RFHHFK+ CSC DYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 151/304 (49%), Gaps = 24/304 (7%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
Q+ F L++++ ++G +D+A +F+ + + V + ++ G+A+ + ++ + F +
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126
Query: 100 -LQYFFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-- 152
P ++ +L C + GK +H L +K ++ L NMY+K C
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK-CRQ 185
Query: 153 ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
+EA KVF+ M R+++SWN+++A + + A+E+ + + E +
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV-------------KSMCEENL 232
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
P + T VL A + L +H + GF+ I+ AL+ YA+CGS+ ++Q
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
+FD M ++VSWNS++ AY + KEA+ +F M V+P + + L AC+ G
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 330 VQEG 333
++ G
Sbjct: 353 LERG 356
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 162/344 (47%), Gaps = 24/344 (6%)
Query: 81 SGYAQHGNAEECFRLFCSLLQYFFPN--EFSLASVLISCDYLHG-KLVHALALKFSLDAH 137
S Q N R F S Y N E A +L C L + + L K L
Sbjct: 9 STVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQE 68
Query: 138 VYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKN 196
+ L++++ + DEA +VFE ++ + + +++M+ F AK+ +
Sbjct: 69 HFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGF-------------AKVSD 115
Query: 197 EEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANA 256
++AL F +++ + + P F+ +LK C R +H L+ K GF D
Sbjct: 116 LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 257 LIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPD 313
L + YA+C ++ +++VFD+M DLVSWN+I+ Y+ +G A+ AL++ +M N++P
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLI 373
T VS+L A S L+ G ++ H G ++ +VD+ + G + A +L
Sbjct: 236 FITIVSVLPAVSALRLISVGKEI-HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 374 REMPMEPDSVIWSVLLGSCRKHGETRLAELAATKL--KQLEPGD 415
M +E + V W+ ++ + ++ + A L K+ + ++P D
Sbjct: 295 DGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 153/324 (47%), Gaps = 32/324 (9%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
HACA G++++ +H+ + +++ V N LI+MY K +D A +F ++ R
Sbjct: 344 LHACADLGDLERGRFIHKLSVE--LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYL----HGKLVH 126
+VSW A+I G+AQ+G + F + + P+ F+ SV+ + L H K +H
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 127 ALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ ++ LD +V+V AL++MY+K A A +F+ M R+V +WN+MI +
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTERHASAVHSLIA 243
A+ELF +M Q+ + P+ TF V+ AC +GLV E + +
Sbjct: 522 AALELFEEM-------------QKGTIKPNGVTFLSVISACSHSGLV-EAGLKCFYMMKE 567
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS-WNSILKAYALHGQA---- 298
Y E A++ R G ++ + +M V+ + ++L A +H
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 627
Query: 299 KEALQLFSNMNVQPDSATFVSLLS 322
K A +LF + PD + LL+
Sbjct: 628 KAAERLFE---LNPDDGGYHVLLA 648
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/600 (38%), Positives = 355/600 (59%), Gaps = 41/600 (6%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDDARHLF 65
+++F ACA N+ QLH I + + V L++MYAK G +DD R +F
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDD----VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 66 DEMPKRNVVSWTALISGYAQHGN-AEECFRLFCSLLQ--YFFPNEFSLASVLISCDYLH- 121
D M +V+SWTALI+GY ++ N A E LF ++ + PN F+ +S +C L
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 122 ---GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMI-A 176
GK V A K L ++ VAN++I+M+ KS ++A + FE++ +N++S+N+ +
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
R E QA +L +++ E + F TF+ +L A + + R
Sbjct: 449 TCRNLNFE-QAFKLLSEITERELGVSAF-------------TFASLLSGVANVGSIRKGE 494
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+HS + K G + + NALI Y++CGSI + +VF+ M +++SW S++ +A HG
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 297 QAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
A L+ F+ M V+P+ T+V++LSACSH GLV EG + F+SM E+H + P+++HY
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
ACMVDLL R G + +A + I MP + D ++W LG+CR H T L +LAA K+ +L+P
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDP 674
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+ ++Q+SNIY +G + ++ +R++MK + K G SWIE+ +++H+F G HP
Sbjct: 675 NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHP 734
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQ----LYHHSEKLALVFAIMN 529
I+ +L+ LI ++K GYVP+T L LH +EEE+ E + LY HSEK+A+ F ++
Sbjct: 735 NAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLI- 793
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + R V R+ KN+R+C DCHN MK S + G+EIV+RD NRFHHFKD CSCNDYW
Sbjct: 794 --STSKSRPV-RVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 186/372 (50%), Gaps = 32/372 (8%)
Query: 40 QDLFVTNHLINMYAKF-GYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+ V LI+M+ K ++A +FD+M + NVV+WT +I+ Q G E R F
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 99 L-LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ L F ++F+L+SV +C L GK +H+ A++ L V +L++MY+K A
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSA 317
Query: 154 ----DEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
D+ KVF+ ME +V+SW ++I + + C L +AI LF++M +
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM------------IT 365
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
+ + P+ TFS KAC L R V K G ++ +AN++I + + +
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACS 325
+++ F+ ++ +LVS+N+ L + ++A +L S + + + TF SLLS +
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI- 384
+ G +++G ++ HS + G+ ++ + + G I A ++ ME +VI
Sbjct: 486 NVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN--FMENRNVIS 542
Query: 385 WSVLLGSCRKHG 396
W+ ++ KHG
Sbjct: 543 WTSMITGFAKHG 554
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 195/406 (48%), Gaps = 39/406 (9%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++L +C + + +H +I F EP D + N LI++Y+K G A +F+
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIE-FDIEP-DSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 68 M---PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISC---DYL 120
M KR+VVSW+A+++ Y +G + ++F L+ PN++ +V+ +C D++
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 121 H-GKLVHALALKFS-LDAHVYVANALINMYSK--SCADEAWKVFENMEFRNVISWNSMIA 176
G++ +K ++ V V +LI+M+ K + + A+KVF+ M NV++W MI
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
C +M EA+ F + G D T S V ACA L
Sbjct: 243 ---RC----------MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARC---GSISLSKQVFDKMTYHDLVSWNSILKAYA 293
+HS + G DD + +L+ YA+C GS+ ++VFD+M H ++SW +++ Y
Sbjct: 290 QLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 294 LHGQ-AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ A EA+ LFS M +V+P+ TF S AC + + G +V + G+
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK-RGLAS 406
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-GSCR 393
++ + + R+ +A++ + E + V ++ L G+CR
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 37/302 (12%)
Query: 106 NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVF 160
+ + +S+L SC D+ GKLVHA ++F ++ + N+LI++YSKS + +A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 161 ENMEF---RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP-DW 216
E M R+V+SW++M+A + E AI++F + F +L G+ P D+
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE----------FLEL---GLVPNDY 167
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYG-FEDDTVIANALIHAYARC-GSISLSKQVF 274
C ++ V++AC+ + K G FE D + +LI + + S + +VF
Sbjct: 168 C-YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVF 226
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQ 331
DKM+ ++V+W ++ G +EA++ F +M + D T S+ SAC+ +
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS 286
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRV---GRILEAEKLIREMPMEPDSVI-WSV 387
G K HS G+V ++ +VD+ + G + + K+ ME SV+ W+
Sbjct: 287 LG-KQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDR--MEDHSVMSWTA 341
Query: 388 LL 389
L+
Sbjct: 342 LI 343
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 101/202 (50%), Gaps = 7/202 (3%)
Query: 207 LQREGMAP-DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ R+G+ P D TFS +LK+C R VH+ + ++ E D+V+ N+LI Y++ G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 266 SISLSKQVFDKMTY---HDLVSWNSILKAYALHGQAKEALQLFS---NMNVQPDSATFVS 319
+ ++ VF+ M D+VSW++++ Y +G+ +A+++F + + P+ + +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
++ ACS++ V G +++ + ++D+ + E + + E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 380 PDSVIWSVLLGSCRKHGETRLA 401
+ V W++++ C + G R A
Sbjct: 232 LNVVTWTLMITRCMQMGFPREA 253
Score = 36.6 bits (83), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 358 DLLGRVGRI-LEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQ--LEPG 414
DL G V + L A IR M DSV +S LL SC + + RL +L +L + +EP
Sbjct: 41 DLRGAVSALDLMARDGIRPM----DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP- 95
Query: 415 DSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSW 455
DS+ + + ++Y SG KA + + M+ R K +SW
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMR--RFGKRDVVSW 134
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/630 (34%), Positives = 347/630 (55%), Gaps = 66/630 (10%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAK----------- 54
++ ++ +C + +++ +H ++ DL+ N L+NMYAK
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVR--LGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 55 --------------------------FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGN 88
FG +D R +F+ MP+++VVS+ +I+GYAQ G
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 89 AEECFRLFCSL-LQYFFPNEFSLASVLI----SCDYLHGKLVHALALKFSLDAHVYVANA 143
E+ R+ + P+ F+L+SVL D + GK +H ++ +D+ VY+ ++
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 144 LINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALF 202
L++MY+KS +++ +VF + R+ ISWNS++A + + EAL
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY-------------VQNGRYNEALR 329
Query: 203 LFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYA 262
LFRQ+ + P FS V+ ACA L T +H + + GF + IA+AL+ Y+
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 263 RCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVS 319
+CG+I ++++FD+M D VSW +I+ +ALHG EA+ LF M V+P+ FV+
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 320 LLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
+L+ACSH GLV E F+SM + +G+ +L+HYA + DLLGR G++ EA I +M +E
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE 509
Query: 380 PDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
P +WS LL SC H LAE A K+ ++ + +V M N+Y +G + + +R
Sbjct: 510 PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLR 569
Query: 440 KEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETS 499
M+ +RK P SWIE++N+ H F SG + HP + I + L+ ++ Q++ GYV +TS
Sbjct: 570 LRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Query: 500 LALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLA 559
LHD++EEHK E L+ HSE+LA+ F I+N + IR+ KNIRIC DCH +K
Sbjct: 630 GVLHDVDEEHKRELLFGHSERLAVAFGIINT----EPGTTIRVTKNIRICTDCHVAIKFI 685
Query: 560 SDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S + +EI+VRD++RFHHF CSC DYW
Sbjct: 686 SKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 195/454 (42%), Gaps = 84/454 (18%)
Query: 23 QAMQLHEHMINNFPNEPQDLFVTNH--LINMYAKFGYLDDARHLFDEMPKRNVVSWTALI 80
QA QLH I Q L T+ +I++Y L +A LF + V++W ++I
Sbjct: 23 QAKQLHAQFIRT-----QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVI 77
Query: 81 SGYAQHGNAEECFRLFCSLLQYFF--------PNEFSLASVLISC----DYLHGKLVHAL 128
+ LF L F P+ SVL SC D G+ VH
Sbjct: 78 RCFTDQS-------LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 129 ALKFSLDAHVYVANALINMYSK--------------------------------SC---- 152
++ +D +Y NAL+NMY+K +C
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 153 -ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D +VFE M ++V+S+N++IA +A+ E+AL + R++
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAG-------------YAQSGMYEDALRMVREMGTTD 237
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ PD T S VL + V +H + + G + D I ++L+ YA+ I S+
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+VF ++ D +SWNS++ Y +G+ EAL+LF M V+P + F S++ AC+H
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS-V 387
+ G K H + G + + +VD+ + G I A K+ M + D V W+ +
Sbjct: 358 TLHLG-KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAI 415
Query: 388 LLG-SCRKHGETRLAELAATKLKQLEPGDSLGFV 420
++G + HG ++ K + ++P + + FV
Sbjct: 416 IMGHALHGHGHEAVSLFEEMKRQGVKP-NQVAFV 448
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/594 (36%), Positives = 335/594 (56%), Gaps = 61/594 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+ N +I ++ + G +D A F++M +R++V+W ++ISG+ Q G +F +
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 100 LQ--YFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L+ P+ F+LASVL +C L GK +H+ + D V NALI+MYS+
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 154 ----------------------------------DEAWKVFENMEFRNVISWNSMIAAFR 179
++A +F +++ R+V++W +MI +
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ + EA+ LFR + G P+ T + +L + L + H +H
Sbjct: 390 -------------QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMT-YHDLVSWNSILKAYALHGQA 298
K G ++NALI YA+ G+I+ + + FD + D VSW S++ A A HG A
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 299 KEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
+EAL+LF M ++PD T+V + SAC+HAGLV +G + F M + ++P L HYAC
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDL GR G + EA++ I +MP+EPD V W LL +CR H L ++AA +L LEP +
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S + ++N+Y G + +A IRK MK RV+K G SWIE++++VH F HP++
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEK 676
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
I+ ++++ ++K MGYVP+T+ LHD+EEE KE+ L HHSEKLA+ F +++
Sbjct: 677 NEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLIS----TP 732
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+++ +RIMKN+R+C DCH +K S L+G+EI+VRD+ RFHHFKD CSC DYW
Sbjct: 733 DKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 208/469 (44%), Gaps = 89/469 (18%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY 102
F N +++ Y+K G +D FD++P+R+ VSWT +I GY G + R+ +++
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 103 FF-PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCAD--- 154
P +F+L +VL S GK VH+ +K L +V V+N+L+NMY+K C D
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK-CGDPMM 199
Query: 155 -------------EAWKV-----------------FENMEFRNVISWNSMIAAFRACKLE 184
+W FE M R++++WNSMI+ F +
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+A+++F+KM L+ ++PD T + VL ACA L +HS I
Sbjct: 260 LRALDIFSKM------------LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 245 YGFEDDTVIANALIHAYARCGSISL---------------------------------SK 271
GF+ ++ NALI Y+RCG + +K
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
+F + D+V+W +++ Y HG EA+ LF +M +P+S T ++LS S
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
+ G ++ S +++ G + + ++ + + G I A + + E D+V W+ +
Sbjct: 428 SLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSM 486
Query: 389 LGSCRKHGETRLA-ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
+ + +HG A EL T L + D + +V + + +G N+ R
Sbjct: 487 IIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 177/413 (42%), Gaps = 52/413 (12%)
Query: 105 PNEFSLASVLISCDYL------------HGKLVHALALKFSLDAHVYVANALINMYSKSC 152
P SL+++L C L +LVH +K L VY+ N L+N+YSK+
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 153 -ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE------------- 198
A A K+F+ M R SWN++++A+ E F ++ +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 199 -----EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
+A+ + + +EG+ P T + VL + A VHS I K G + +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPD 313
+N+L++ YA+CG ++K VFD+M D+ SWN+++ + GQ A+ F M + D
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM-AERD 242
Query: 314 SATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL- 372
T+ S++S + G +F ML + + P A ++ + ++ +++
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 373 --IREMPMEPDSVIWSVLLGSCRKHG--ET--RLAELAATKLKQLEPGDSLGFVQMSNIY 426
I + ++ + L+ + G ET RL E TK ++E GF + + Y
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE-----GFTALLDGY 357
Query: 427 CLSGSFNKARLIRKEMKGSRVRKYPGL--------SWIEIENRVHEFASGGKR 471
G N+A+ I +K V + + S+ E N GG+R
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 213 APDWCTFSIVLKACAGLVTER--------HASAVHSLIAKYGFEDDTVIANALIHAYARC 264
AP + S +L+ C L+ + A VH + K G + N L++ Y++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSAC 324
G ++++FD+M SWN++L AY+ G + F + Q DS ++ +++
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP-QRDSVSWTTMIVGY 121
Query: 325 SHAGLVQEGNKVFHSMLENHGVVP 348
+ G + +V M++ G+ P
Sbjct: 122 KNIGQYHKAIRVMGDMVK-EGIEP 144
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/586 (37%), Positives = 327/586 (55%), Gaps = 46/586 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC+ G I ++H LFV N L++MY K G+L +AR + DE
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATK--VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE 200
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
M +R+VVSW +L+ GYAQ+ ++ + C ++ SV IS H
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEV-CREME----------SVKIS---------HD 240
Query: 128 LALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQA 187
SL V MY K +F M ++++SWN MI + + +A
Sbjct: 241 AGTMASLLPAVSNTTTENVMYVKD-------MFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 188 IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGF 247
+EL+++M + +G PD + + VL AC +H I +
Sbjct: 294 VELYSRM-------------EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL 340
Query: 248 EDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN 307
+ ++ NALI YA+CG + ++ VF+ M D+VSW +++ AY G+ +A+ LFS
Sbjct: 341 IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 400
Query: 308 M---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG 364
+ + PDS FV+ L+ACSHAGL++EG F M +++ + P+L+H ACMVDLLGR G
Sbjct: 401 LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSN 424
++ EA + I++M MEP+ +W LLG+CR H +T + LAA KL QL P S +V +SN
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 425 IYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEE 484
IY +G + + IR MK ++K PG S +E+ +H F G + HPQ + I+++L+
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 485 LIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE-RSVIRIM 543
L+ ++K +GYVP++ ALHD+EEE KE L HSEKLA+VFA+MN + + IRI
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 544 KNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
KN+RIC DCH KL S + +EI++RD+NRFH F+ +CSC DYW
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 152/354 (42%), Gaps = 47/354 (13%)
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A KVF+ + RNVI N MI ++ + +++F M + PD
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN-------------VRPD 139
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
TF VLKAC+ T +H K G + N L+ Y +CG +S ++ V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQE 332
+M+ D+VSWNS++ YA + + +AL++ M + D+ T SLL A S+ E
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTE 257
Query: 333 GNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP---MEPDSVIWSVLL 389
M G L + M+ + + +EA +L M EPD+V + +L
Sbjct: 258 NVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 390 GSCRKHGETRLAELAA-----TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
+C G+T L + K+L P + L + ++Y G KAR + + MK
Sbjct: 317 PAC---GDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
V +SW + + + G R A+F KL++ G VP++
Sbjct: 373 RDV-----VSWTAM---ISAYGFSG-RGCDAVALFSKLQD-------SGLVPDS 410
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
F++ K+ + +L K+ +E +FL Q+ PD R
Sbjct: 19 FQSRKVSSSLPKLELDQKSPQETVFLLGQVL--DTYPDI----------------RTLRT 60
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
VHS I ++ + L+ AYA ++ +++VFD++ +++ N ++++Y +G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
E +++F M NV+PD TF +L ACS +G + G K+ H G+ L
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI-HGSATKVGLSSTLFVGN 179
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+V + G+ G + EA ++ EM D V W+ L+
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLV 213
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 323/544 (59%), Gaps = 35/544 (6%)
Query: 61 ARHLFDEMPKR-NVVSWTALISGYAQHGNAEECFRLFCSLL--------QYFFPNEFSLA 111
A +F ++ K NV W LI GYA+ GN+ F L+ + + +P F +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYP--FLIK 129
Query: 112 SVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVI 169
+V D G+ +H++ ++ + +YV N+L+++Y+ +C D A+KVF+ M ++++
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEKDLV 188
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
+WNS+I F A+ EEAL L+ ++ +G+ PD T +L ACA +
Sbjct: 189 AWNSVINGF-------------AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
VH + K G + +N L+ YARCG + +K +FD+M + VSW S++
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 290 KAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
A++G KEA++LF M + P TFV +L ACSH G+V+EG + F M E +
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAA 405
+ P+++H+ CMVDLL R G++ +A + I+ MPM+P+ VIW LLG+C HG++ LAE A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 406 TKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEF 465
++ QLEP S +V +SN+Y ++ + IRK+M V+K PG S +E+ NRVHEF
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 466 ASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVF 525
G K HPQ +AI+ KL+E+ G+L+ GYVP+ S D+EEE KE + +HSEK+A+ F
Sbjct: 476 LMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAF 535
Query: 526 AIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSC 585
+++ ERS I ++KN+R+C DCH +KL S + +EIVVRD +RFHHFK+ CSC
Sbjct: 536 MLISTP----ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSC 591
Query: 586 NDYW 589
DYW
Sbjct: 592 QDYW 595
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 149/306 (48%), Gaps = 24/306 (7%)
Query: 5 TQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
T Y L A +++ +H +I + ++V N L+++YA G + A +
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRS--GFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCDYLH-- 121
FD+MP++++V+W ++I+G+A++G EE L+ + + P+ F++ S+L +C +
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 122 --GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF 178
GK VH +K L +++ +N L+++Y++ +EA +F+ M +N +SW S+I
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 179 RACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHAS 236
+AIELF M++ EG+ P TF +L AC+ G+V E
Sbjct: 299 AVNGFGKEAIELFKYMEST------------EGLLPCEITFVGILYACSHCGMVKEGF-E 345
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYH-DLVSWNSILKAYALH 295
+ +Y E ++ AR G + + + M ++V W ++L A +H
Sbjct: 346 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 296 GQAKEA 301
G + A
Sbjct: 406 GDSDLA 411
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/590 (35%), Positives = 339/590 (57%), Gaps = 38/590 (6%)
Query: 19 GNIKQAMQLHE-------HMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
G +K + LH+ H ++ +D V N +++ Y+K + + R LFDEMP+
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSL-------LQYFFPNEFSLASVLISCDYLHGKL 124
+ VS+ +IS Y+Q E F + + F S+A+ L S G+
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM--GRQ 372
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
+H AL + D+ ++V N+L++MY+K +EA +F+++ R +SW ++I+ + L
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGL 432
Query: 184 EAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIA 243
++LF KM+ + D TF+ VLKA A + +H+ I
Sbjct: 433 HGAGLKLFTKMRGS-------------NLRADQSTFATVLKASASFASLLLGKQLHAFII 479
Query: 244 KYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQ 303
+ G ++ + L+ YA+CGSI + QVF++M + VSWN+++ A+A +G + A+
Sbjct: 480 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIG 539
Query: 304 LFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLL 360
F+ M +QPDS + + +L+ACSH G V++G + F +M +G+ P+ HYACM+DLL
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL 599
Query: 361 GRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGF 419
GR GR EAEKL+ EMP EPD ++WS +L +CR H LAE AA KL +E D+ +
Sbjct: 600 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY 659
Query: 420 VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIF 479
V MSNIY +G + K R ++K M+ ++K P SW+E+ +++H F+S + HP + I
Sbjct: 660 VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIV 719
Query: 480 KKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSV 539
+K+ EL +++ GY P+TS + D++E+ K E L +HSE+LA+ FA+++ C
Sbjct: 720 RKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCP---- 775
Query: 540 IRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I +MKN+R C DCH +KL S ++ +EI VRD++RFHHF + +CSC DYW
Sbjct: 776 IVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 187/392 (47%), Gaps = 36/392 (9%)
Query: 19 GNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
G + A ++++ M + ++ TN +I+ + K G + AR LFD MP R VV+WT
Sbjct: 62 GQVSAARKVYDEMPH------KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTI 115
Query: 79 LISGYAQHGNAEECFRLF---CSLLQYFFPNEFSLASVLISCDYLHGK----LVHALALK 131
L+ YA++ + +E F+LF C P+ + ++L C+ + VHA A+K
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 132 FSLDAHVY--VANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAI 188
D + + V+N L+ Y + D A +FE + ++ +++N++I + L ++I
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 189 ELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE 248
LF KM+ + G P TFS VLKA GL +H+L GF
Sbjct: 236 HLFLKMR-------------QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 249 DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSN- 307
D + N ++ Y++ + ++ +FD+M D VS+N ++ +Y+ Q + +L F
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 308 --MNVQPDSATFVSLLSACSHAGLVQEGNKVF-HSMLENHGVVPQLDHYACMVDLLGRVG 364
M + F ++LS ++ +Q G ++ ++L + + + +VD+ +
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN--SLVDMYAKCE 400
Query: 365 RILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
EAE + + +P + +V W+ L+ + G
Sbjct: 401 MFEEAELIFKSLP-QRTTVSWTALISGYVQKG 431
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 40/197 (20%)
Query: 238 VHSLIAKYGFEDD-------------------------------TVIANALIHAYARCGS 266
V + I K GF+ D TV N +I + + G
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLL 321
+S ++ +FD M +V+W ++ YA + EA +LF M PD TF +LL
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 322 SACSHAGLVQEGNKVFHSMLENHG--VVPQLDHYACMVDLLGRVGRILEAEKLIREMPME 379
C+ A + Q H+ G P L ++ V R+ A L E+P E
Sbjct: 155 PGCNDA-VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP-E 212
Query: 380 PDSVIWSVLLGSCRKHG 396
DSV ++ L+ K G
Sbjct: 213 KDSVTFNTLITGYEKDG 229
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/568 (38%), Positives = 335/568 (58%), Gaps = 31/568 (5%)
Query: 35 FPNEP-QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECF 93
F P +D+ LI YA GY+++A+ LFDE+P ++VVSW A+ISGYA+ GN +E
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 94 RLFCSLLQY-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMY 148
LF +++ P+E ++ +V+ +C G+ VH +++ + NALI++Y
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 149 SKSCAD--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQ 206
SK C + A +FE + +++VISWN++I + M +EAL LF++
Sbjct: 312 SK-CGELETACGLFERLPYKDVISWNTLIGGY-------------THMNLYKEALLLFQE 357
Query: 207 LQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY--GFEDDTVIANALIHAYARC 264
+ R G P+ T +L ACA L +H I K G + + + +LI YA+C
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLL 321
G I + QVF+ + + L SWN+++ +A+HG+A + LFS M +QPD TFV LL
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 322 SACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPD 381
SACSH+G++ G +F +M +++ + P+L+HY CM+DLLG G EAE++I M MEPD
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 537
Query: 382 SVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKE 441
VIW LL +C+ HG L E A L ++EP + +V +SNIY +G +N+ R
Sbjct: 538 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 597
Query: 442 MKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA 501
+ ++K PG S IEI++ VHEF G K HP+ I+ LEE+ L+ G+VP+TS
Sbjct: 598 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Query: 502 LHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASD 561
L ++EEE KE L HHSEKLA+ F +++ + + + I+KN+R+C +CH KL S
Sbjct: 658 LQEMEEEWKEGALRHHSEKLAIAFGLIST----KPGTKLTIVKNLRVCRNCHEATKLISK 713
Query: 562 LLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +EI+ RD RFHHF+D +CSCNDYW
Sbjct: 714 IYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 194/419 (46%), Gaps = 34/419 (8%)
Query: 55 FGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASV 113
F L A +F + + N++ W + G+A + +L+ C + PN ++ V
Sbjct: 81 FEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 140
Query: 114 LISCD----YLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNV 168
L SC + G+ +H LK D +YV +LI+MY ++ ++A KVF+ R+V
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 169 ISWNSMIAAFRACKLEAQAIELF------------------AKMKNEEEALFLFRQLQRE 210
+S+ ++I + + A +LF A+ N +EAL LF+ + +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
+ PD T V+ ACA + VH I +GF + I NALI Y++CG + +
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHA 327
+F+++ Y D++SWN+++ Y KEAL LF M P+ T +S+L AC+H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 328 GLVQEGNKVFHSMLENH--GVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIW 385
G + G + H ++ GV ++D+ + G I A ++ + + W
Sbjct: 381 GAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSW 438
Query: 386 SVLLGSCRKHGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYCLSGSFNKARLIRKEM 442
+ ++ HG + +++++ ++P D + FV + + SG + R I + M
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQP-DDITFVGLLSACSHSGMLDLGRHIFRTM 496
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 112 SVLISCDYLHG-KLVHALALKFSLDAHVYVANALINMYSKSCADE----AWKVFENMEFR 166
S+L +C L +++HA +K L Y + LI S E A VF+ ++
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 167 NVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC 226
N++ WN+M FR L + + AL L+ + G+ P+ TF VLK+C
Sbjct: 98 NLLIWNTM---FRGHALSSDPVS----------ALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 227 AGLVTERHASAVHSLIAKYG--------------------FED-----------DTVIAN 255
A + +H + K G ED D V
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALI YA G I ++++FD++ D+VSWN+++ YA G KEAL+LF +M NV+P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
D +T V+++SAC+ +G ++ G +V H +++HG L ++DL + G + A L
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 373 IREMPMEPDSVIWSVLLGS 391
+P + D + W+ L+G
Sbjct: 324 FERLPYK-DVISWNTLIGG 341
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
++ ACA G I +H ++ + LI+MYAK G ++ A +F+ +
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDY 119
+++ SW A+I G+A HG A+ F LF + + P++ + +L +C +
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/553 (38%), Positives = 323/553 (58%), Gaps = 25/553 (4%)
Query: 46 NHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FF 104
N L++MY+K G LD A+ +F EM R+VVS+T++I+GYA+ G A E +LF + +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 105 PNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKV 159
P+ +++ +VL C GK VH + L ++V+NAL++MY+K + EA V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 160 FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTF 219
F M +++ISWN++I + +A+ LF + L+ + +PD T
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL------------LEEKRFSPDERTV 502
Query: 220 SIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY 279
+ VL ACA L +H I + G+ D +AN+L+ YA+CG++ L+ +FD +
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 280 HDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKV 336
DLVSW ++ Y +HG KEA+ LF+ M ++ D +FVSLL ACSH+GLV EG +
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
Query: 337 FHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
F+ M + P ++HYAC+VD+L R G +++A + I MP+ PD+ IW LL CR H
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 682
Query: 397 ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWI 456
+ +LAE A K+ +LEP ++ +V M+NIY + + + + +RK + +RK PG SWI
Sbjct: 683 DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Query: 457 EIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYH 516
EI+ RV+ F +G +P+ E I L ++ ++ GY P T AL D EE KEE L
Sbjct: 743 EIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCG 802
Query: 517 HSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFH 576
HSEKLA+ I++ G +IR+ KN+R+C DCH K S L +EIV+RDSNRFH
Sbjct: 803 HSEKLAMALGIISSG----HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFH 858
Query: 577 HFKDRICSCNDYW 589
FKD CSC +W
Sbjct: 859 QFKDGHCSCRGFW 871
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 197/409 (48%), Gaps = 30/409 (7%)
Query: 26 QLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQ 85
QLH ++ + E V N L+ Y K +D AR +FDEM +R+V+SW ++I+GY
Sbjct: 216 QLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 86 HGNAEECFRLFCSLLQYFFPNEF-SLASVLISCDYLH----GKLVHALALKFSLDAHVYV 140
+G AE+ +F +L + ++ SV C G+ VH++ +K
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 141 ANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE 198
N L++MYSK C D A VF M R+V+S+ SMIA + L +A++LF +M
Sbjct: 334 CNTLLDMYSK-CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM---- 388
Query: 199 EALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALI 258
+ EG++PD T + VL CA VH I + D ++NAL+
Sbjct: 389 ---------EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 259 HAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDS 314
YA+CGS+ ++ VF +M D++SWN+I+ Y+ + A EAL LF+ + PD
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 315 ATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIR 374
T +L AC+ +G ++ H + +G +VD+ + G +L A L
Sbjct: 500 RTVACVLPACASLSAFDKGREI-HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFD 558
Query: 375 EMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE-PGDSLGFVQM 422
++ D V W+V++ HG + A +++Q D + FV +
Sbjct: 559 DIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 167/354 (47%), Gaps = 24/354 (6%)
Query: 51 MYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFP-NEFS 109
MY G L +A +FDE+ + W L++ A+ G+ LF ++ + ++
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 110 LASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENME 164
+ V S L G+ +H LK V N+L+ Y K+ D A KVF+ M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 165 FRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLK 224
R+VISWNS+I + + L E+ L +F Q+ G+ D T V
Sbjct: 258 ERDVISWNSIINGYVSNGL-------------AEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
CA AVHS+ K F + N L+ Y++CG + +K VF +M+ +VS
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
+ S++ YA G A EA++LF M + PD T ++L+ C+ L+ EG +V H +
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWI 423
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKH 395
+ + + + ++D+ + G + EAE + EM ++ D + W+ ++G K+
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKN 476
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 168/340 (49%), Gaps = 45/340 (13%)
Query: 4 STQIYAT--LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
S +Y + + CA + + + ++HE + N + D+FV+N L++MYAK G + +A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN--DLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 62 RHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ--YFFPNEFSLASVLISCDY 119
+F EM ++++SW +I GY+++ A E LF LL+ F P+E ++A VL +C
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
L G+ +H ++ + +VAN+L++MY+K A A +F+++ ++++SW M
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKAC--AGLVTE 232
IA + + F K EA+ LF Q+++ G+ D +F +L AC +GLV E
Sbjct: 572 IAGY--------GMHGFGK-----EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 618
Query: 233 --------RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTY-HDLV 283
RH + + Y ++ AR G + + + + M D
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYA---------CIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 284 SWNSILKAYALHGQAKEALQLFSNM-NVQPDSATFVSLLS 322
W ++L +H K A ++ + ++P++ + L++
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMA 709
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 189/433 (43%), Gaps = 74/433 (17%)
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISC-- 117
D+ FD R+V + + + GN E +L C ++ + +L SVL C
Sbjct: 52 DSITTFD----RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI-DPRTLCSVLQLCAD 106
Query: 118 --DYLHGKLVHAL--ALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISW 171
GK V F +D+++ + L MY+ +C D EA +VF+ ++ + W
Sbjct: 107 SKSLKDGKEVDNFIRGNGFVIDSNL--GSKLSLMYT-NCGDLKEASRVFDEVKIEKALFW 163
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
N ++ AK + ++ LF+++ G+ D TFS V K+ + L +
Sbjct: 164 NILMNEL-------------AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+H I K GF + + N+L+ Y + + +++VFD+MT D++SWNSI+
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 292 YALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVF----------- 337
Y +G A++ L +F M ++ D AT VS+ + C+ + L+ G V
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 338 ----HSMLENHGVVPQLD---------------HYACMVDLLGRVGRILEAEKLIREMPM 378
+++L+ + LD Y M+ R G EA KL EM
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 379 E---PDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGF-VQMSN----IYCLSG 430
E PD + +L C ++ RL + + ++ D LGF + +SN +Y G
Sbjct: 391 EGISPDVYTVTAVLNCCARY---RLLDEGKRVHEWIKEND-LGFDIFVSNALMDMYAKCG 446
Query: 431 SFNKARLIRKEMK 443
S +A L+ EM+
Sbjct: 447 SMQEAELVFSEMR 459
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/592 (35%), Positives = 341/592 (57%), Gaps = 30/592 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
Y ++ C G+++ Q+H +I N + +V + LI+MYAK G LD A +
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKT--NFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----G 122
++VVSWT +I+GY Q+ ++ F +L +E L + + +C L G
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ +HA A + + NAL+ +YS+ C +E++ FE E + I+WN++++ F+
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQ- 668
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ N EEAL +F ++ REG+ + TF +KA + + VH+
Sbjct: 669 ------------QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+I K G++ +T + NALI YA+CGSIS +++ F +++ + VSWN+I+ AY+ HG E
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 776
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL F M NV+P+ T V +LSACSH GLV +G F SM +G+ P+ +HY C+V
Sbjct: 777 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+L R G + A++ I+EMP++PD+++W LL +C H + E AA L +LEP DS
Sbjct: 837 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA 896
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+V +SN+Y +S ++ L R++MK V+K PG SWIE++N +H F G + HP +
Sbjct: 897 TYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADE 956
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRER 537
I + ++L + +GYV + L++++ E K+ ++ HSEKLA+ F +++ +
Sbjct: 957 IHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVP-- 1014
Query: 538 SVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
I +MKN+R+C DCH ++K S + +EI+VRD+ RFHHF+ CSC DYW
Sbjct: 1015 --INVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 189/379 (49%), Gaps = 31/379 (8%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQY 102
V N LI++Y++ G++D AR +FD + ++ SW A+ISG +++ E RLFC + +
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 103 FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAW 157
P ++ +SVL +C + G+ +H L LK + YV NAL+++Y A
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 158 KVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWC 217
+F NM R+ +++N++I C +A+ELF +M +G+ PD
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-------------HLDGLEPDSN 390
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
T + ++ AC+ T +H+ K GF + I AL++ YA+C I + F +
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 278 TYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ---PDSATFVSLLSACSHAGLVQEGN 334
++V WN +L AY L + + ++F M ++ P+ T+ S+L C G ++ G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 335 KVFHSMLENHGVVPQLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSC 392
++ +++ + QL+ Y C ++D+ ++G++ A ++ + D V W+ ++
Sbjct: 511 QIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG- 565
Query: 393 RKHGETRLAELAATKLKQL 411
+ + + A T +Q+
Sbjct: 566 --YTQYNFDDKALTTFRQM 582
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 30/405 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
++++ AC +++ QLH ++ F + D +V N L+++Y G L A H+F
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSS---DTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISCD----YLH 121
M +R+ V++ LI+G +Q G E+ LF + L P+ +LAS++++C
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ +HA K ++ + AL+N+Y+K CAD A F E NV+ WN M+ A+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAK-CADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
L ++N + +FRQ+Q E + P+ T+ +LK C L +H
Sbjct: 467 ----------LLDDLRN---SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
S I K F+ + + + LI YA+ G + + + + D+VSW +++ Y +
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL F M ++ D + +SAC+ ++EG ++ H+ G L +
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNAL 632
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
V L R G+I E L E D++ W+ L+ ++ G A
Sbjct: 633 VTLYSRCGKI-EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 186/395 (47%), Gaps = 28/395 (7%)
Query: 6 QIYATLFHAC-ALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHL 64
Q L C +G++ + +LH ++ + ++ L + Y G L A +
Sbjct: 85 QTLKWLLEGCLKTNGSLDEGRKLHSQILK--LGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 65 FDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCD----- 118
FDEMP+R + +W +I A E F LF ++ + PNE + + VL +C
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 119 YLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAA 177
+ + +HA L L V N LI++YS++ D A +VF+ + ++ SW +MI+
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ EA+AI LF M ++ G+ P FS VL AC + +
Sbjct: 263 LSKNECEAEAIRLFCDM-------YVL------GIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H L+ K GF DT + NAL+ Y G++ ++ +F M+ D V++N+++ + G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 298 AKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYA 354
++A++LF M ++PDS T SL+ ACS G + G ++ H+ G
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEG 428
Query: 355 CMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+++L + I A E +E + V+W+V+L
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 462
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 341/588 (57%), Gaps = 33/588 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ +F G I +A +L++ M +D+ + ++I + G +D+AR +FDE
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMM------PVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHA 127
M +RNVV+WT +I+GY Q+ + +LF + + E S S+L+ L G++ A
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE---KTEVSWTSMLLGYT-LSGRIEDA 253
Query: 128 LALKFSLDAHVYVA-NALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEA 185
+ +A NA+I + + +A +VF+ ME R+ +W MI A+ E
Sbjct: 254 EEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAY-----ER 308
Query: 186 QAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKY 245
+ EL EAL LF Q+Q++G+ P + + +L CA L + ++ VH+ + +
Sbjct: 309 KGFEL--------EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 246 GFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLF 305
F+DD +A+ L+ Y +CG + +K VFD+ + D++ WNSI+ YA HG +EAL++F
Sbjct: 361 QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIF 420
Query: 306 SNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGR 362
M P+ T +++L+ACS+AG ++EG ++F SM V P ++HY+C VD+LGR
Sbjct: 421 HEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGR 480
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQM 422
G++ +A +LI M ++PD+ +W LLG+C+ H LAE+AA KL + EP ++ +V +
Sbjct: 481 AGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLL 540
Query: 423 SNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG-KRHPQREAIFKK 481
S+I + ++RK M+ + V K+PG SWIE+ +VH F GG K HP++ I
Sbjct: 541 SSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMM 600
Query: 482 LEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIR 541
LE+ G L+ GY P+ S LHD++EE K + L HSE+LA+ + ++ E IR
Sbjct: 601 LEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLK----LPEGVPIR 656
Query: 542 IMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+MKN+R+C DCH +KL S + +EI++RD+NRFHHF + CSC DYW
Sbjct: 657 VMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 180/394 (45%), Gaps = 58/394 (14%)
Query: 18 HGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWT 77
+G K+A QL + M +++ N L++ Y K + +AR++F+ MP+RNVVSWT
Sbjct: 61 NGLPKEARQLFDEM------SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWT 114
Query: 78 ALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH 137
A++ GY Q G E LF + + NE S +V+ G++ A L +
Sbjct: 115 AMVKGYMQEGMVGEAESLFWRMPER---NEVSW-TVMFGGLIDDGRIDKARKLYDMMPVK 170
Query: 138 VYVANALINMYSKSC----ADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
VA+ NM C DEA +F+ M RNV++W +MI +R A +LF
Sbjct: 171 DVVAST--NMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFE----D 249
M + E W + ++ +G + + A+ FE
Sbjct: 229 MPEKTEV--------------SWTSM-LLGYTLSGRIED----------AEEFFEVMPMK 263
Query: 250 DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM- 308
+ NA+I + G IS +++VFD M D +W ++KAY G EAL LF+ M
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 309 --NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDH----YACMVDLLGR 362
V+P + +S+LS C+ +Q G +V H+ H V Q D + ++ + +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQV-HA----HLVRCQFDDDVYVASVLMTMYVK 378
Query: 363 VGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
G +++A KL+ + D ++W+ ++ HG
Sbjct: 379 CGELVKA-KLVFDRFSSKDIIMWNSIISGYASHG 411
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 154/365 (42%), Gaps = 66/365 (18%)
Query: 49 INMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEF 108
I+ ++ G +++AR FD + + + SW +++SGY +G +E +LF +E
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLF---------DEM 74
Query: 109 SLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNV 168
S +V+ + G Y+ N +I EA VFE M RNV
Sbjct: 75 SERNVVSWNGLVSG----------------YIKNRMIV--------EARNVFELMPERNV 110
Query: 169 ISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAG 228
+SW +M+ + + +A LF +M E +++++ G
Sbjct: 111 VSWTAMVKGYMQEGMVGEAESLFWRMPERNEV-----------------SWTVMF---GG 150
Query: 229 LVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSI 288
L+ + L + D V + +I R G + ++ +FD+M ++V+W ++
Sbjct: 151 LIDDGRIDKARKLYDMMPVK-DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209
Query: 289 LKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
+ Y + + A +LF M + ++ S+L + +G +++ + F V+P
Sbjct: 210 ITGYRQNNRVDVARKLFEVMP-EKTEVSWTSMLLGYTLSGRIEDAEEFFE-------VMP 261
Query: 349 QLDHYAC--MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG-ETRLAELAA 405
AC M+ G VG I +A ++ M + D+ W ++ + + G E +L A
Sbjct: 262 MKPVIACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 406 TKLKQ 410
KQ
Sbjct: 321 QMQKQ 325
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 25/232 (10%)
Query: 258 IHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATF 317
I +R G I+ +++ FD + + + SWNSI+ Y +G KEA QLF M+ + + ++
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-ERNVVSW 82
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMP 377
L+S ++ E VF M E + V + MV + G + EAE L MP
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVV-----SWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 378 MEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP-GDSLGFVQMSNIYCLSGSFNKAR 436
E + V W+V+ G G A KL + P D + M C G ++AR
Sbjct: 138 -ERNEVSWTVMFGGLIDDGRID----KARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQ 488
LI EM+ V ++W + G R R + +KL E++ +
Sbjct: 193 LIFDEMRERNV-----VTWTTMIT--------GYRQNNRVDVARKLFEVMPE 231
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/594 (36%), Positives = 339/594 (57%), Gaps = 27/594 (4%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
S +A++ CA ++ QLH ++ Q+ + L+ Y+K + DA
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTAMLDALR 351
Query: 64 LFDEMP-KRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH 121
LF E+ NVVSWTA+ISG+ Q+ EE LF + + PNEF+ + +L + +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
VHA +K + + V AL++ Y K +EA KVF ++ +++++W++M+A +
Sbjct: 412 PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGY-- 469
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL-VTERHASAVH 239
A+ E A+ +F +L + G+ P+ TFS +L CA + H
Sbjct: 470 -----------AQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 518
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
K + +++AL+ YA+ G+I +++VF + DLVSWNS++ YA HGQA
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 578
Query: 300 EALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL +F M V+ D TF+ + +AC+HAGLV+EG K F M+ + + P +H +CM
Sbjct: 579 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
VDL R G++ +A K+I MP S IW +L +CR H +T L LAA K+ ++P DS
Sbjct: 639 VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 698
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
+V +SN+Y SG + + +RK M V+K PG SWIE++N+ + F +G + HP ++
Sbjct: 699 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 758
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
I+ KLE+L +LK +GY P+TS L DI++EHKE L HSE+LA+ F ++ +
Sbjct: 759 QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLI----ATPK 814
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHF-KDRICSCNDYW 589
S + I+KN+R+C DCH +KL + + +EIVVRDSNRFHHF D +CSC D+W
Sbjct: 815 GSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 195/372 (52%), Gaps = 31/372 (8%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+ V L++ Y K D R +FDEM +RNVV+WT LISGYA++ +E LF +
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 101 -QYFFPNEFSLASVL--ISCDYLHGK--LVHALALKFSLDAHVYVANALINMYSKSCAD- 154
+ PN F+ A+ L ++ + + G+ VH + +K LD + V+N+LIN+Y K C +
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK-CGNV 245
Query: 155 -EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMA 213
+A +F+ E ++V++WNSMI+ + A L+ +A+ +F M+ + +L
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR------LNYVRLSES--- 296
Query: 214 PDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQV 273
+F+ V+K CA L R +H + KYGF D I AL+ AY++C ++ + ++
Sbjct: 297 ----SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 274 FDKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
F ++ ++VSW +++ + + +EA+ LFS M V+P+ T+ +L+A
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ +V + E V ++D ++G++ EA K+ + + D V WS +L
Sbjct: 413 SEVHAQVVKTNYERSSTVG-----TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML 466
Query: 390 GSCRKHGETRLA 401
+ GET A
Sbjct: 467 AGYAQTGETEAA 478
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 201/393 (51%), Gaps = 25/393 (6%)
Query: 58 LDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS- 116
L +A +LFD+ P R+ S+ +L+ G+++ G +E RLF ++ + + S+ S ++
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 117 ----CDYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISW 171
CD L G+ +H +KF V V +L++ Y K S + KVF+ M+ RNV++W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 172 NSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT 231
++I+ + A+ +E L LF ++Q EG P+ TF+ L A
Sbjct: 163 TTLISGY-------------ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 232 ERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
VH+++ K G + ++N+LI+ Y +CG++ ++ +FDK +V+WNS++
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 292 YALHGQAKEALQLFSNMN---VQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVP 348
YA +G EAL +F +M V+ ++F S++ C++ ++ ++ S+++ +
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 349 QLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL-GSCRKHGETRLAEL-AAT 406
Q A MV + +L+A +L +E+ + V W+ ++ G + G+ +L +
Sbjct: 330 QNIRTALMV-AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 407 KLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIR 439
K K + P + V ++ + +S S A++++
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVK 421
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/561 (36%), Positives = 314/561 (55%), Gaps = 27/561 (4%)
Query: 38 EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFC 97
+ ++ + N L+ G ++DA LF M K + VSW A+I G AQ+G A+E F
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 98 SL-LQYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYSK-S 151
+ +Q +++ SVL +C L GK +HA ++ + H+YV +ALI+MY K
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 152 CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
C A VF+ M+ +NV+SW +M+ + + EEA+ +F +QR G
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGY-------------GQTGRAEEAVKIFLDMQRSG 366
Query: 212 MAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSK 271
+ PD T + ACA + + S H G ++N+L+ Y +CG I S
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 272 QVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAG 328
++F++M D VSW +++ AYA G+A E +QLF M ++PD T ++SACS AG
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 329 LVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVL 388
LV++G + F M +G+VP + HY+CM+DL R GR+ EA + I MP PD++ W+ L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 389 LGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
L +CR G + + AA L +L+P G+ +S+IY G ++ +R+ M+ V+
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K PG SWI+ + ++H F++ + P + I+ KLEEL ++ GY P+TS HD+EE
Sbjct: 607 KEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEA 666
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K + L +HSE+LA+ F ++ IR+ KN+R+CVDCHN K S + G+EI+
Sbjct: 667 VKVKMLNYHSERLAIAFGLI----FVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREIL 722
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+ RFH FKD CSC D+W
Sbjct: 723 VRDAVRFHRFKDGTCSCGDFW 743
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 216/428 (50%), Gaps = 33/428 (7%)
Query: 1 FLHSTQIYATLFHACALHGNIKQA---MQLHEHMINNFPNEPQ-DLFVTNHLINMYAKFG 56
+H I A + L+ NI A M+ + F PQ +LF N+L+ Y+K G
Sbjct: 27 MIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAG 86
Query: 57 YLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN--EFSLASVL 114
+ + F+++P R+ V+W LI GY+ G + + ++++ F N +L ++L
Sbjct: 87 LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTML 146
Query: 115 -ISCDYLH---GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVI 169
+S H GK +H +K ++++ V + L+ MY+ C +A KVF ++ RN +
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNE-----------------EEALFLFRQLQREGM 212
+NS++ AC + A++LF M+ + +EA+ FR+++ +G+
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
D F VL AC GL +H+ I + F+D + +ALI Y +C + +K
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD+M ++VSW +++ Y G+A+EA+++F +M + PD T +SAC++
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
++EG++ FH G++ + +V L G+ G I ++ +L EM + D+V W+ ++
Sbjct: 387 LEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMV 444
Query: 390 GSCRKHGE 397
+ + G
Sbjct: 445 SAYAQFGR 452
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 14 ACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNV 73
ACA ++++ Q H I + + V+N L+ +Y K G +DD+ LF+EM R+
Sbjct: 380 ACANVSSLEEGSQFHGKAITS--GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 74 VSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLHGKLVHALALKF 132
VSWTA++S YAQ G A E +LF ++Q+ P+ +L V+ +C LV F
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS--RAGLVEKGQRYF 495
Query: 133 SLDAHVYVA-------NALINMYSKSCA-DEAWKVFENMEF-RNVISWNSMIAAFR 179
L Y + +I+++S+S +EA + M F + I W ++++A R
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 219 FSIVLKACAGLVTE---RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
+S+ +K C GL R+ +H I + +T + N ++HAYA S + +++VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQPDSATFVSLLSACSHAGLVQEGNK 335
++ +L SWN++L AY+ G E F + + D T+ L+ S +GLV K
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR-DGVTWNVLIEGYSLSGLVGAAVK 124
Query: 336 VFHSMLEN 343
+++M+ +
Sbjct: 125 AYNTMMRD 132
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 339/594 (57%), Gaps = 34/594 (5%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + AC + K + LH ++ N D+ L+++Y+ G L+DA LFDE
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFN--HDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC----DYLHG 122
+P R+VV+WTAL SGY G E LF +++ P+ + + VL +C D G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRA 180
+ + + + + +V L+N+Y+K C ++A VF++M +++++W++MI + +
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAK-CGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIV--LKACAGLVTERHASAV 238
+ IELF Q+ +E + PD FSIV L +CA L
Sbjct: 291 NSFPKEGIELFL-------------QMLQENLKPD--QFSIVGFLSSCASLGALDLGEWG 335
Query: 239 HSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
SLI ++ F + +ANALI YA+CG+++ +VF +M D+V N+ + A +G
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 299 KEALQLFSN---MNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC 355
K + +F + + PD +TF+ LL C HAGL+Q+G + F+++ + + ++HY C
Sbjct: 396 KLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGC 455
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVDL GR G + +A +LI +MPM P++++W LL CR +T+LAE +L LEP +
Sbjct: 456 MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWN 515
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
+ +VQ+SNIY + G +++A +R M ++K PG SWIE+E +VHEF + K HP
Sbjct: 516 AGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLS 575
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
+ I+ KLE+L +++ MG+VP T D+EEE KE L +HSEKLA+ +++
Sbjct: 576 DKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIST----D 631
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
VIR++KN+R+C DCH MKL S + +EIVVRD+NRFH F + CSCNDYW
Sbjct: 632 HGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 189/405 (46%), Gaps = 30/405 (7%)
Query: 6 QIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLF 65
QI + AC + Q+H +IN+ + D F+ N L+ F + LF
Sbjct: 15 QIKTLISVACT----VNHLKQIHVSLINHHLH--HDTFLVNLLLKRTLFFRQTKYSYLLF 68
Query: 66 DEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLH--- 121
N+ + +LI+G+ + E LF S+ ++ + + F+ VL +C
Sbjct: 69 SHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRK 128
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAFR 179
G +H+L +K + V +L+++YS S ++A K+F+ + R+V++W ++ + +
Sbjct: 129 LGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT 188
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+AI+LF KM G+ PD VL AC + +
Sbjct: 189 TSGRHREAIDLFKKM-------------VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ + + ++ + L++ YA+CG + ++ VFD M D+V+W+++++ YA + K
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
E ++LF M N++PD + V LS+C+ G + G S+++ H + L +
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANAL 354
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+D+ + G + ++ +EM E D VI + + K+G +L+
Sbjct: 355 IDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLS 398
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 331/561 (59%), Gaps = 32/561 (5%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH----GNAEECFRLFCSL 99
V+N L+ +YA+ GYL++ R +F MP+ + VSW ++I A+ A CF
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 100 LQYFFPNEFSLASVLISCDYLH--GKLVHALALKFSLDAHVYVANALINMYSKSCA--DE 155
Q FS +S GK +H LALK ++ NALI Y K C D
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGK-CGEMDG 570
Query: 156 AWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
K+F M E R+ ++WNSMI+ + +L A+A++L F+ + QR
Sbjct: 571 CEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL---------VWFMLQTGQR----L 617
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
D ++ VL A A + T VH+ + E D V+ +AL+ Y++CG + + + F
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMNVQ----PDSATFVSLLSACSHAGLV 330
+ M + SWNS++ YA HGQ +EAL+LF M + PD TFV +LSACSHAGL+
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLG 390
+EG K F SM +++G+ P+++H++CM D+LGR G + + E I +MPM+P+ +IW +LG
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 391 SC-RKHG-ETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVR 448
+C R +G + L + AA L QLEP +++ +V + N+Y G + RK+MK + V+
Sbjct: 798 ACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVK 857
Query: 449 KYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEE 508
K G SW+ +++ VH F +G K HP + I+KKL+EL +++ GYVP+T AL+D+E+E
Sbjct: 858 KEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQE 917
Query: 509 HKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIV 568
+KEE L +HSEKLA+ F + Q S IRIMKN+R+C DCH+ K S + G++I+
Sbjct: 918 NKEEILSYHSEKLAVAFVLAAQRS---STLPIRIMKNLRVCGDCHSAFKYISKIEGRQII 974
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
+RDSNRFHHF+D CSC+D+W
Sbjct: 975 LRDSNRFHHFQDGACSCSDFW 995
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 190/379 (50%), Gaps = 40/379 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+D+++ N+LIN Y + G AR +FDEMP RN VSW ++SGY+++G +E +
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 100 L-QYFFPNEFSLASVLISCD------YLHGKLVHALALKFSLDAHVYVANALINMYSKSC 152
+ + F N+++ SVL +C L G+ +H L K S V+N LI+MY K
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 153 ADEAWKV--FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
+ + F ++E +N +SWNS+I+ ++++ ++ A +F +Q +
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIIS-------------VYSQAGDQRSAFRIFSSMQYD 200
Query: 211 GMAPDWCTF-SIVLKACAGLVTE---RHASAVHSLIAKYGFEDDTVIANALIHAYARCGS 266
G P TF S+V AC+ +TE R + I K G D + + L+ A+A+ GS
Sbjct: 201 GSRPTEYTFGSLVTTACS--LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 267 ISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLS 322
+S +++VF++M + V+ N ++ +EA +LF +MN V P+S +V LLS
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES--YVILLS 316
Query: 323 ACSHAGLVQEGNKVFHSMLENHGVVPQLDHYAC-----MVDLLGRVGRILEAEKLIREMP 377
+ L +E + H + L + +V++ + G I +A ++ M
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 378 MEPDSVIWSVLLGSCRKHG 396
+ DSV W+ ++ ++G
Sbjct: 377 -DKDSVSWNSMITGLDQNG 394
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 169/369 (45%), Gaps = 39/369 (10%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
DLFV + L++ +AK G L AR +F++M RN V+ L+ G + EE +LF +
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 100 ------------LQYFFPNEFSLASVLISCDYLHGKLVHALALKFSL-DAHVYVANALIN 146
L FP E+SLA G+ VH + L D V + N L+N
Sbjct: 302 SMIDVSPESYVILLSSFP-EYSLAE---EVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 147 MYSK--SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
MY+K S AD A +VF M ++ +SWNSMI +A+E + M+
Sbjct: 358 MYAKCGSIAD-ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR--------- 407
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARC 264
R + P T L +CA L + +H K G + + ++NAL+ YA
Sbjct: 408 ----RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 265 GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA-KEALQLFSN---MNVQPDSATFVSL 320
G ++ +++F M HD VSWNSI+ A A ++ EA+ F N + + TF S+
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
LSA S + G ++ H + + + + ++ G+ G + EK+ M
Sbjct: 524 LSAVSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 381 DSVIWSVLL 389
D+V W+ ++
Sbjct: 583 DNVTWNSMI 591
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 34/298 (11%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIAAFRAC 181
+ H+ K LD VY+ N LIN Y ++ A KVF+ M RN +SW +++
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSG---- 76
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACA--GLVTERHASAVH 239
+++ +EAL R + +EG+ + F VL+AC G V +H
Sbjct: 77 ---------YSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Query: 240 SLIAKYGFEDDTVIANALIHAYARC-GSISLSKQVFDKMTYHDLVSWNSILKAYALHGQA 298
L+ K + D V++N LI Y +C GS+ + F + + VSWNSI+ Y+ G
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 299 KEALQLFSNM---NVQPDSATFVSLL-SACSHAGLVQEGNKVFHSML---ENHGVVPQLD 351
+ A ++FS+M +P TF SL+ +ACS L + ++ ++ + G++ L
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR-KHGETRLAELAATKL 408
+ +V + G + A K+ +M + +++G R K GE ATKL
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE------ATKL 296
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+YAT+ A A +++ M++H + D+ V + L++MY+K G LD A F+
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVR--ACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLF--CSLLQYFFPNEFSLASVLISCDYLHGKL 124
MP RN SW ++ISGYA+HG EE +LF L P+ + VL +C H L
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS--HAGL 736
Query: 125 V-------HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFR-NVISWNSMI 175
+ +++ + L + + + ++ ++ D+ E M + NV+ W +++
Sbjct: 737 LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Query: 176 AAFRACKLEAQAIELFAK 193
A C+ + EL K
Sbjct: 797 GA--CCRANGRKAELGKK 812
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/603 (36%), Positives = 334/603 (55%), Gaps = 39/603 (6%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDD--ARHLFDEMPKRNVVSWT 77
N+ Q Q+H H++ + Q ++ LI K G D AR + + + RN WT
Sbjct: 61 NLNQIKQIHGHVLRKGLD--QSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWT 118
Query: 78 ALISGYAQHGNAEECFRLF-CSLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKF 132
A+I GYA G +E ++ C + P F+ +++L +C + G+ HA +
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 133 SLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQA--- 187
VYV N +I+MY K D A KVF+ M R+VISW +IAA+ R +E A
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 188 --------------IELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
+ FA+ +EAL F ++++ G+ D T + + ACA L +
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 234 HASAVHSLIAKYGFE--DDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKA 291
+A + K G+ D VI +ALI Y++CG++ + VF M ++ +++S++
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 292 YALHGQAKEALQLF----SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV 347
A HG+A+EAL LF + ++P++ TFV L ACSH+GLV +G +VF SM + GV
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 348 PQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATK 407
P DHY CMVDLLGR GR+ EA +LI+ M +EP +W LLG+CR H +AE+AA
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478
Query: 408 LKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIEN-RVHEFA 466
L +LEP ++ +SN+Y +G + +RK +K ++K P +SW+ +N ++H+F
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 538
Query: 467 SGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFA 526
G HP I KLEEL+ +L +GY P+ S +D+ + K L H+EKLAL F+
Sbjct: 539 PGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFS 598
Query: 527 IMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCN 586
++ S I IMKN+R+C+DCH FM+LAS++ GK I++RD+ RFHHF+ CSC
Sbjct: 599 LLTT----NRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCG 654
Query: 587 DYW 589
D+W
Sbjct: 655 DFW 657
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 314/561 (55%), Gaps = 30/561 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLL 100
D+FV +MY K DDAR LFDE+P+RN+ +W A IS G E F
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 101 QY-FFPNEFSLASVLISC-DYLH---GKLVHALALKFSLDAHVYVANALINMYSKSCADE 155
+ PN + + L +C D+LH G +H L L+ D V V N LI+ Y K
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 156 AWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAP 214
+ ++ F M +N +SW S++AA+ + +E+A L+ + +++ +
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAY-------------VQNHEDEKASVLYLRSRKDIVET 308
Query: 215 DWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
S VL ACAG+ ++H+ K E + +AL+ Y +CG I S+Q F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 275 DKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGL 329
D+M +LV+ NS++ YA GQ AL LF M P+ TFVSLLSACS AG
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+ G K+F SM +G+ P +HY+C+VD+LGR G + A + I++MP++P +W L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+CR HG+ +L LAA L +L+P DS V +SN + +G + +A +R+E+KG ++K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SWI ++N+VH F + + H + I L +L +++ GY P+ L+L+D+EEE
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 608
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSV-IRIMKNIRICVDCHNFMKLASDLLGKEIV 568
K ++ HHSEKLAL F G L SV IRI KN+RIC DCH+F K S + +EI+
Sbjct: 609 KAAEVSHHSEKLALAF-----GLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREII 663
Query: 569 VRDSNRFHHFKDRICSCNDYW 589
VRD+NRFH FKD ICSC DYW
Sbjct: 664 VRDNNRFHRFKDGICSCKDYW 684
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 192/391 (49%), Gaps = 39/391 (9%)
Query: 27 LHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQH 86
+H ++ + P F+ N+LINMY+K + + AR + P RNVVSWT+LISG AQ+
Sbjct: 28 VHARIVKTL-DSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQN 86
Query: 87 GNAEECFRLFCSLLQYFF--------PNEFSLASVLISCDYLH----GKLVHALALKFSL 134
G+ F + L FF PN+F+ + L GK +HALA+K
Sbjct: 87 GH-------FSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 135 DAHVYVANALINMYSKS-CADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAK 193
V+V + +MY K+ D+A K+F+ + RN+ +WN+ I+ +AIE F +
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 194 MKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVI 253
FR++ P+ TF L AC+ + +H L+ + GF+ D +
Sbjct: 200 ----------FRRIDGH---PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 254 ANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA--LQLFSNMNVQ 311
N LI Y +C I S+ +F +M + VSW S++ AY + + ++A L L S ++
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 312 PDSATFV-SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAE 370
S + S+LSAC+ ++ G + H+ V + + +VD+ G+ G I ++E
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSI-HAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 371 KLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ EMP E + V + L+G G+ +A
Sbjct: 366 QAFDEMP-EKNLVTRNSLIGGYAHQGQVDMA 395
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 332/560 (59%), Gaps = 29/560 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFD--EMPKRNVVSWTALISGYAQHGNAEECFRLFCS 98
D+FV N LI +YAK L AR +F+ +P+R +VSWTA++S YAQ+G E +F
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 99 LLQY-FFPNEFSLASVL--ISC--DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA 153
+ + P+ +L SVL +C D G+ +HA +K L+ + +L MY+K
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 154 DEAWKV-FENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGM 212
K+ F+ M+ N+I WN+MI+ + +AI++F +M N++ +
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-------------V 319
Query: 213 APDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQ 272
PD + + + ACA + + A +++ + + + DD I++ALI +A+CGS+ ++
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 273 VFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGL 329
VFD+ D+V W++++ Y LHG+A+EA+ L+ M V P+ TF+ LL AC+H+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 330 VQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
V+EG F+ M +H + PQ HYAC++DLLGR G + +A ++I+ MP++P +W LL
Sbjct: 440 VREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 390 GSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRK 449
+C+KH L E AA +L ++P ++ +VQ+SN+Y + +++ +R MK + K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 450 YPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEH 509
G SW+E+ R+ F G K HP+ E I +++E + +LK G+V +LHD+ +E
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEE 618
Query: 510 KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVV 569
EE L HSE++A+ + +++ + + +RI KN+R CV+CH KL S L+ +EIVV
Sbjct: 619 AEETLCSHSERIAIAYGLISTP----QGTPLRITKNLRACVNCHAATKLISKLVDREIVV 674
Query: 570 RDSNRFHHFKDRICSCNDYW 589
RD+NRFHHFKD +CSC DYW
Sbjct: 675 RDTNRFHHFKDGVCSCGDYW 694
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 210/418 (50%), Gaps = 45/418 (10%)
Query: 2 LHSTQIYATLFHACALHGNIKQAMQLHEHMIN---NFPNEPQDLFVTNHLINMYAKFGYL 58
+HS YA+L + +KQ +H ++ F F+ LI+ + FG +
Sbjct: 18 IHSDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSG-----FLITKLIHASSSFGDI 69
Query: 59 DDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL-LQYFFPNEFSLASVLISC 117
AR +FD++P+ + W A+I GY+++ + ++ ++ ++ L P+ F+ +L +C
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 118 DYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEF--RNVI 169
L G+ VHA + DA V+V N LI +Y+K C A VFE + R ++
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIV 188
Query: 170 SWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGL 229
SW ++++A +A+ EAL +F Q+++ + PDW VL A L
Sbjct: 189 SWTAIVSA-------------YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 230 VTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSIL 289
+ ++H+ + K G E + + +L YA+CG ++ +K +FDKM +L+ WN+++
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 290 KAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
YA +G A+EA+ +F M +V+PD+ + S +SAC+ G +++ SM E G
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA----RSMYEYVGR 351
Query: 347 VPQLDHY---ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
D + ++D+ + G + E +L+ + ++ D V+WS ++ HG R A
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 336/599 (56%), Gaps = 31/599 (5%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ + Y L HAC ++ +++ ++NN P+ + + + LI +++ LD AR
Sbjct: 130 TPEAYTDLLHACISAKSLHHGIKICSLILNN-PSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 64 LFDEMPKRNVVS---WTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISC-- 117
+FD++ ++++ W A+ GY+++G+ + ++ +L F P FS++ L +C
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 118 --DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSM 174
D G+ +HA +K V N L+ +Y +S D+A KVF+ M RNV++WNS+
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 308
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I+ + +K E LFR++Q E + W T + +L AC+ +
Sbjct: 309 IS-------------VLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLT 355
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H+ I K + D + N+L+ Y +CG + S++VFD M DL SWN +L YA+
Sbjct: 356 GKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
+G +E + LF M V PD TFV+LLS CS GL + G +F M V P L+
Sbjct: 416 NGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE 475
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HYAC+VD+LGR G+I EA K+I MP +P + IW LL SCR HG + E+AA +L L
Sbjct: 476 HYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVL 535
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
EP + +V +SNIY + ++ IR+ MK V+K G SW+++++++ F +GG
Sbjct: 536 EPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGY 595
Query: 472 HPQREAIFKKL-EELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+ +KK+ EL ++ GY P TS+ LHD++EE K + HSE+LA +++++
Sbjct: 596 EFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHT 655
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
G E IRI KN+R+C DCH++MK+ S + + IV+RD+ RFHHF D ICSC DYW
Sbjct: 656 G----EGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/600 (35%), Positives = 336/600 (56%), Gaps = 31/600 (5%)
Query: 1 FLHSTQIYATLFHACALHGNIKQAMQLHEHMINN-FPNEPQDLFVTNHLINMYAKFGYLD 59
F+ + + T A G A +H ++ + +P+ V L+ +Y + G +
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR---VGVGLLQLYTQLGDMS 299
Query: 60 DARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCD 118
DA +F+EMPK +VV W+ +I+ + Q+G E LF + + F PNEF+L+S+L C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 119 YLH----GKLVHALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWN 172
G+ +H L +K D +YV+NALI++Y+K C D A K+F + +N +SWN
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAK-CEKMDTAVKLFAELSSKNEVSWN 418
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTE 232
++I + + +A +FR+ R ++ TFS L ACA L +
Sbjct: 419 TVIVGYE-------------NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 233 RHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAY 292
VH L K ++N+LI YA+CG I ++ VF++M D+ SWN+++ Y
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 293 ALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQ 349
+ HG ++AL++ M + +P+ TF+ +LS CS+AGL+ +G + F SM+ +HG+ P
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 350 LDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLK 409
L+HY CMV LLGR G++ +A KLI +P EP +IW +L + A +A ++
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 410 QLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGG 469
++ P D +V +SN+Y + + IRK MK V+K PGLSWIE + VH F+ G
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGL 705
Query: 470 KRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN 529
HP + I LE L + GYVP+ + L D+++E K+++L+ HSE+LAL + ++
Sbjct: 706 SDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVR 765
Query: 530 QGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S R+ I IMKN+RIC DCH+ MK+ S ++ +++V+RD NRFHHF +CSC D+W
Sbjct: 766 MPS---SRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 44/374 (11%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRL----- 95
DLF TN L+N Y K G+ DA +LFDEMP+RN VS+ L GYA RL
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 96 ------FCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYS 149
F S L+ F SL I C +LH +V K D++ +V ALIN YS
Sbjct: 143 ELNPHVFTSFLKLFV----SLDKAEI-CPWLHSPIV-----KLGYDSNAFVGAALINAYS 192
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
D A VFE + ++++ W A +C +E E ++L L ++
Sbjct: 193 VCGSVDSARTVFEGILCKDIVVW----AGIVSCYVENGYFE---------DSLKLLSCMR 239
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G P+ TF LKA GL A VH I K + D + L+ Y + G +S
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN---VQPDSATFVSLLSACS 325
+ +VF++M +D+V W+ ++ + +G EA+ LF M V P+ T S+L+ C+
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQLDHYA--CMVDLLGRVGRILEAEKLIREMPMEPDSV 383
G ++ H ++ G LD Y ++D+ + ++ A KL E+ + V
Sbjct: 360 IGKCSGLGEQL-HGLVVKVGF--DLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEV 415
Query: 384 IWSVLLGSCRKHGE 397
W+ ++ GE
Sbjct: 416 SWNTVIVGYENLGE 429
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCAD-EAWKVFENMEFRNVISWNSMIA 176
D + K +H LK ++ N L+N Y K+ D +A +F+ M RN +S+ ++
Sbjct: 64 DPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQ 123
Query: 177 AFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHAS 236
+ AC ++ + L+ +L REG + F+ LK L
Sbjct: 124 GY-AC----------------QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 237 AVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHG 296
+HS I K G++ + + ALI+AY+ CGS+ ++ VF+ + D+V W I+ Y +G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 297 QAKEALQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVV-PQLDH 352
+++L+L S M + P++ TF + L A G V +L+ V+ P++
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG- 285
Query: 353 YACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ L ++G + +A K+ EMP + D V WS ++ ++G
Sbjct: 286 -VGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQNG 327
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 49/271 (18%)
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKM 277
+ +L+ C A A+H I K G D N L++AY + G + +FD+M
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 278 TYHDLVSWNSILKAYA----------LHGQAKEA--------LQLFSNMN---VQP---- 312
+ VS+ ++ + YA LH + E L+LF +++ + P
Sbjct: 111 PERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 313 -------DSATFV--SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRV 363
DS FV +L++A S G V VF +L VV +A +V
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV-----WAGIVSCYVEN 225
Query: 364 GRILEAEKLIREMPME---PDSVIWSVLLGSCRKHGETRLAELAATKLKQ----LEPGDS 416
G ++ KL+ M M P++ + L + G A+ ++ + L+P
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMKGSRV 447
+G +Q+ Y G + A + EM + V
Sbjct: 286 VGLLQL---YTQLGDMSDAFKVFNEMPKNDV 313
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 334/578 (57%), Gaps = 33/578 (5%)
Query: 41 DLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL- 99
D+FV N LI+ Y G LD A +F + +++VVSW ++I+G+ Q G+ ++ LF +
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 100 LQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA-D 154
+ + ++ VL +C + G+ V + + ++ ++ +ANA+++MY+K + +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 155 EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEE---------------- 198
+A ++F+ ME ++ ++W +M+ + + A E+ M ++
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 199 --EALFLFRQLQ-REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIAN 255
EAL +F +LQ ++ M + T L ACA + +HS I K+G + + +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 256 ALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQP 312
ALIH Y++CG + S++VF+ + D+ W++++ A+HG EA+ +F M NV+P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 313 DSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKL 372
+ TF ++ ACSH GLV E +FH M N+G+VP+ HYAC+VD+LGR G + +A K
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 373 IREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSF 432
I MP+ P + +W LLG+C+ H LAE+A T+L +LEP + V +SNIY G +
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 433 NKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGM 492
+RK M+ + ++K PG S IEI+ +HEF SG HP E ++ KL E++ +LK
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN 644
Query: 493 GYVPETSLALHDIEEEH-KEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVD 551
GY PE S L IEEE KE+ L HSEKLA+ + +++ VIR++KN+R+C D
Sbjct: 645 GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIST----EAPKVIRVIKNLRVCGD 700
Query: 552 CHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
CH+ KL S L +EI+VRD RFHHF++ CSCND+W
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 213/455 (46%), Gaps = 69/455 (15%)
Query: 20 NIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYA--KFGYLDDARHLFDEMPKRNVVSWT 77
+++Q Q H HMI D + + L M A F L+ AR +FDE+PK N +W
Sbjct: 42 SLRQLKQTHGHMIRT--GTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWN 99
Query: 78 ALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISCDYLH----GKLVHALALK 131
LI YA + F ++ +PN+++ ++ + + G+ +H +A+K
Sbjct: 100 TLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
Query: 132 FSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIE 189
++ + V+VAN+LI+ Y SC D A KVF ++ ++V+SWNSMI
Sbjct: 160 SAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVVSWNSMING------------ 206
Query: 190 LFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFED 249
F + + ++AL LF++++ E + T VL ACA + V S I +
Sbjct: 207 -FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 250 DTVIANALIHAYARCGSISLSKQVFD-------------------------------KMT 278
+ +ANA++ Y +CGSI +K++FD M
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 279 YHDLVSWNSILKAYALHGQAKEALQLFSNMNVQP----DSATFVSLLSACSHAGLVQEGN 334
D+V+WN+++ AY +G+ EAL +F + +Q + T VS LSAC+ G ++ G
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG- 384
Query: 335 KVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRK 394
+ HS ++ HG+ + ++ + + G + ++ ++ + + D +WS ++G
Sbjct: 385 RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAM 443
Query: 395 HGETRLAELAATKLKQ--LEPGDSLGFVQMSNIYC 427
HG A K+++ ++P V +N++C
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNG----VTFTNVFC 474
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 23/327 (7%)
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSC---ADEAWKVFENMEFRNVISWNSMIAAFR 179
K H ++ + Y A+ L M + S + A KVF+ + N +WN++I A+
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 180 ACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVH 239
+ +I F M +E + P+ TF ++KA A + + ++H
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCY------------PNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 240 SLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAK 299
+ K D +AN+LIH Y CG + + +VF + D+VSWNS++ + G
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 300 EALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACM 356
+AL+LF M +V+ T V +LSAC+ ++ G +V S +E + V L M
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEENRVNVNLTLANAM 273
Query: 357 VDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDS 416
+D+ + G I +A++L M E D+V W+ +L + + E A L + D
Sbjct: 274 LDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG---YAISEDYEAAREVLNSMPQKDI 329
Query: 417 LGFVQMSNIYCLSGSFNKARLIRKEMK 443
+ + + + Y +G N+A ++ E++
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQ 356
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 147/329 (44%), Gaps = 59/329 (17%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD---- 66
+ ACA N++ Q+ ++ N N +L + N +++MY K G ++DA+ LFD
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVN--VNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 67 ---------------------------EMPKRNVVSWTALISGYAQHGNAEECFRLF--C 97
MP++++V+W ALIS Y Q+G E +F
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 98 SLLQYFFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYSKSCA 153
L + N+ +L S L +C + G+ +H+ K + + +V +ALI+MYSK C
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK-CG 414
Query: 154 D--EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREG 211
D ++ +VF ++E R+V W++MI +A+++F KM Q
Sbjct: 415 DLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM-------------QEAN 461
Query: 212 MAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISL 269
+ P+ TF+ V AC+ GLV E S H + + YG + ++ R G +
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAE-SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 270 SKQVFDKMTYHDLVS-WNSILKAYALHGQ 297
+ + + M S W ++L A +H
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHAN 549
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/593 (35%), Positives = 343/593 (57%), Gaps = 33/593 (5%)
Query: 9 ATLFHACALHGNIKQAMQLHEHMIN-NFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+++ AC ++ A ++ +M+ F E V N LI++YAK G + AR +F+
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST---VRNILIDVYAKCGDMITARDVFNS 367
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPNEFSLASVLIS-----CDYLHG 122
M ++ VSW ++ISGY Q G+ E +LF ++ + +LIS D G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 123 KLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFRA 180
K +H+ +K + + V+NALI+MY+K C + ++ K+F +M + ++WN++I+A
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAK-CGEVGDSLKIFSSMGTGDTVTWNTVISA--- 483
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
C + + L + Q+++ + PD TF + L CA L +R +H
Sbjct: 484 C----------VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ ++G+E + I NALI Y++CG + S +VF++M+ D+V+W ++ AY ++G+ ++
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
AL+ F++M + PDS F++++ ACSH+GLV EG F M ++ + P ++HYAC+V
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
DLL R +I +AE+ I+ MP++PD+ IW+ +L +CR G+ AE + ++ +L P D
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 418 GFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREA 477
+ SN Y ++K LIRK +K + K PG SWIE+ VH F+SG PQ EA
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Query: 478 IFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLY-HHSEKLALVFAIMNQGSLCRE 536
I+K LE L + GY+P+ ++EEE ++ +L HSE+LA+ F ++N
Sbjct: 774 IYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNT----EP 829
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ +++MKN+R+C DCH KL S ++G+EI+VRD+NRFH FKD CSC D W
Sbjct: 830 GTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 217/414 (52%), Gaps = 27/414 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ ACA + + ++E +++ DLFV N L++MY++ G L AR +FDE
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDM--GFESDLFVGNALVDMYSRMGLLTRARQVFDE 166
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDYL----HG 122
MP R++VSW +LISGY+ HG EE ++ L + P+ F+++SVL + L G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 123 KLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRAC 181
+ +H ALK +++ V V N L+ MY K +A +VF+ M+ R+ +S+N+MI +
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 182 KLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSL 241
++ +++ +F E L F+ PD T S VL+AC L A +++
Sbjct: 287 EMVEESVRMFL------ENLDQFK--------PDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 242 IAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEA 301
+ K GF ++ + N LI YA+CG + ++ VF+ M D VSWNSI+ Y G EA
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 302 LQLFSNMNV---QPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVD 358
++LF M + Q D T++ L+S + ++ G K HS G+ L ++D
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALID 451
Query: 359 LLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLE 412
+ + G + ++ K+ M D+V W+ ++ +C + G+ T++++ E
Sbjct: 452 MYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 139/270 (51%), Gaps = 20/270 (7%)
Query: 125 VHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENME-FRNVISWNSMIAAFRACK 182
+HAL + LD+ + + LI+ YS + VF + +NV WNS+I AF
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 183 LEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLI 242
L +A+E + K++ + ++PD TF V+KACAGL V+ I
Sbjct: 86 LFPEALEFYGKLRESK-------------VSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 243 AKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEAL 302
GFE D + NAL+ Y+R G ++ ++QVFD+M DLVSWNS++ Y+ HG +EAL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 303 QLF---SNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDL 359
+++ N + PDS T S+L A + +V++G + H GV + +V +
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL-HGFALKSGVNSVVVVNNGLVAM 251
Query: 360 LGRVGRILEAEKLIREMPMEPDSVIWSVLL 389
+ R +A ++ EM + DSV ++ ++
Sbjct: 252 YLKFRRPTDARRVFDEMDVR-DSVSYNTMI 280
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 180/364 (49%), Gaps = 24/364 (6%)
Query: 43 FVTNHLINMYAKFGYLDDARHLFDEM-PKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ 101
F + LI+ Y+ F + +F + P +NV W ++I ++++G E + L +
Sbjct: 40 FFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE 99
Query: 102 Y-FFPNEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYSK-SCADE 155
P++++ SV+ +C D G LV+ L ++ ++V NAL++MYS+
Sbjct: 100 SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 156 AWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPD 215
A +VF+ M R+++SWNS+I+ + + +A+E++ ++KN + PD
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN-------------SWIVPD 206
Query: 216 WCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFD 275
T S VL A L+ + +H K G V+ N L+ Y + + +++VFD
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 276 KMTYHDLVSWNSILKAYALHGQAKEALQLF-SNMN-VQPDSATFVSLLSACSHAGLVQEG 333
+M D VS+N+++ Y +E++++F N++ +PD T S+L AC H +
Sbjct: 267 EMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLA 326
Query: 334 NKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCR 393
+++ ML+ G V + ++D+ + G ++ A + M + D+V W+ ++
Sbjct: 327 KYIYNYMLK-AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYI 384
Query: 394 KHGE 397
+ G+
Sbjct: 385 QSGD 388
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/575 (39%), Positives = 328/575 (57%), Gaps = 38/575 (6%)
Query: 25 MQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYA 84
M+ H+ + + P EP D F N +++ Y + + A+ FD MP ++ SW +I+GYA
Sbjct: 110 MEAHQ-LFDEIP-EP-DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 85 QHGNAEECFRLFCSLLQYFFPNEFS---LASVLISCDYLHGKLVHALALKFSLDAHVYVA 141
+ G E+ LF S+++ NE S + S I C L K H K + V
Sbjct: 167 RRGEMEKARELFYSMME---KNEVSWNAMISGYIECGDLE-KASHFF--KVAPVRGVVAW 220
Query: 142 NALINMYSKSCADE-AWKVFENMEF-RNVISWNSMIAAFRACKLEAQAIELFAKMKNEEE 199
A+I Y K+ E A +F++M +N+++WN+MI+ + + E+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY-------------VENSRPED 267
Query: 200 ALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIH 259
L LFR + EG+ P+ S L C+ L + +H +++K +D +LI
Sbjct: 268 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
Query: 260 AYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSAT 316
Y +CG + + ++F+ M D+V+WN+++ YA HG A +AL LF M ++PD T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 317 FVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREM 376
FV++L AC+HAGLV G F SM+ ++ V PQ DHY CMVDLLGR G++ EA KLIR M
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Query: 377 PMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKAR 436
P P + ++ LLG+CR H LAE AA KL QL ++ G+VQ++NIY +
Sbjct: 448 PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVA 507
Query: 437 LIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVP 496
+RK MK S V K PG SWIEI N+VH F S + HP+ ++I KKL+EL ++K GY P
Sbjct: 508 RVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKP 567
Query: 497 ETSLALHDIEEEHKEEQLYHHSEKLALVFAIMN--QGSLCRERSVIRIMKNIRICVDCHN 554
E ALH++EEE KE+ L HSEKLA+ F + QGS I++ KN+RIC DCH
Sbjct: 568 ELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQ------IQVFKNLRICGDCHK 621
Query: 555 FMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+K S++ +EI+VRD+ RFHHFKD CSC DYW
Sbjct: 622 AIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 133/346 (38%), Gaps = 90/346 (26%)
Query: 114 LISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSC-ADEAWKVFENMEFRNVISWN 172
L+ DYL K S ++ N +I +S D A +VF M +N I+WN
Sbjct: 46 LVRSDYL---------TKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWN 96
Query: 173 SMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVT- 231
S++ + + + QL E PD +++I+L V
Sbjct: 97 SLLIG----------------ISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNF 140
Query: 232 -----------ERHASAVHSLIAKYG---------------FEDDTVIANALIHAYARCG 265
+ A++ +++I Y E + V NA+I Y CG
Sbjct: 141 EKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECG 200
Query: 266 S-------------------------------ISLSKQVFDKMTYH-DLVSWNSILKAYA 293
+ L++ +F MT + +LV+WN+++ Y
Sbjct: 201 DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 294 LHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQL 350
+ + ++ L+LF M ++P+S+ S L CS +Q G ++ H ++ + +
Sbjct: 261 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDV 319
Query: 351 DHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++ + + G + +A KL E+ + D V W+ ++ +HG
Sbjct: 320 TALTSLISMYCKCGELGDAWKLF-EVMKKKDVVAWNAMISGYAQHG 364
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 329/594 (55%), Gaps = 39/594 (6%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + + C G + QA +L M +D N +++ Y +FG +DDA LF +
Sbjct: 131 WTAMVNGCFRSGKVDQAERLFYQM------PVKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFFPN-EFSLASVLISCD----YLHG 122
MP +NV+SWT +I G Q+ + E LF ++L+ + V+ +C + G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 123 KLVHALALKFSLDAHVYVANALINMYS--KSCADEAWKVFENMEFRNVISWNSMIAAFRA 180
VH L +K YV+ +LI Y+ K D KVF+ V W ++++ +
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR-KVFDEKVHEQVAVWTALLSGY-- 301
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
+ K E+AL +F + R + P+ TF+ L +C+ L T +H
Sbjct: 302 -----------SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G E D + N+L+ Y+ G+++ + VF K+ +VSWNSI+ A HG+ K
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKW 410
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLE--NHGVVPQLDHYAC 355
A +F M N +PD TF LLSACSH G +++G K+F+ M NH + ++ HY C
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH-IDRKIQHYTC 469
Query: 356 MVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGD 415
MVD+LGR G++ EAE+LI M ++P+ ++W LL +CR H + E AA + L+
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 416 SLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQR 475
S +V +SNIY +G ++ +R +MK + + K PG SW+ I + HEF SG + H R
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSR 589
Query: 476 EAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCR 535
I++KLE L +LK +GY P+ ALHD+E+E KEE L++HSE+LA+ F ++N
Sbjct: 590 --IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINT----V 643
Query: 536 ERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
E S + +MKN+R+C DCH +KL S ++G+EIV+RD RFHHFK+ CSC DYW
Sbjct: 644 EGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 202/419 (48%), Gaps = 41/419 (9%)
Query: 31 MINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAE 90
+ N P+ L+ +I Y + L DA +LFDEMP R+VVSW ++ISG + G+
Sbjct: 57 VFNQVPSPHVSLY--TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMN 114
Query: 91 ECFRLFCSLLQYFFPNEFSLASVLISCDYLHGKLVHALALKFSLDAHVYVA-NALINMYS 149
+LF + + + S +++ C + GK+ A L + + A N++++ Y
Sbjct: 115 TAVKLFDEMPE---RSVVSWTAMVNGC-FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 150 K-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
+ D+A K+F+ M +NVISW +MI C L+ + EAL LF+ +
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMI-----CGLDQN--------ERSGEALDLFKNML 217
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
R + F+ V+ ACA VH LI K GF + ++ +LI YA C I
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACS 325
S++VFD+ + + W ++L Y+L+ + ++AL +FS M ++ P+ +TF S L++CS
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 326 HAGLVQEGNKVFHSMLENHGVVPQL----DHYA--CMVDLLGRVGRILEAEKLIREMPME 379
G + G E HGV +L D + +V + G + +A + ++ +
Sbjct: 338 ALGTLDWGK-------EMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FK 389
Query: 380 PDSVIWSVLLGSCRKHGETRLAELAATKLKQL--EPGDSLGFVQMSNIYCLSGSFNKAR 436
V W+ ++ C +HG + A + ++ +L EP D + F + + G K R
Sbjct: 390 KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP-DEITFTGLLSACSHCGFLEKGR 447
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 331/593 (55%), Gaps = 34/593 (5%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
+L AC G+ + + +H + I + +LFV+N LI++YA+FG L D + +FD M
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKH--GLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 70 KRNVVSWTALISGYAQHGNAEECFRLF----CSLLQYFFPNEFSLASVLISC-DYLHGKL 124
R+++SW ++I Y + LF S +Q SLAS+L D +
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRS 369
Query: 125 VHALALK---FSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRA 180
V L+ F D + + NA++ MY+K D A VF + +VISWN++I+ +
Sbjct: 370 VQGFTLRKGWFLED--ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 181 CKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHS 240
++AIE++ M+ E E +A + T+ VL AC+ R +H
Sbjct: 428 NGFASEAIEMYNIMEEEGE------------IAANQGTWVSVLPACSQAGALRQGMKLHG 475
Query: 241 LIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKE 300
+ K G D + +L Y +CG + + +F ++ + V WN+++ + HG ++
Sbjct: 476 RLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEK 535
Query: 301 ALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMV 357
A+ LF M V+PD TFV+LLSACSH+GLV EG F M ++G+ P L HY CMV
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMV 595
Query: 358 DLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSL 417
D+ GR G++ A K I+ M ++PD+ IW LL +CR HG L ++A+ L ++EP + +
Sbjct: 596 DMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP-EHV 654
Query: 418 GF-VQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQRE 476
G+ V +SN+Y +G + IR G +RK PG S +E++N+V F +G + HP E
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714
Query: 477 AIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRE 536
++++L L +LK +GYVP+ L D+E++ KE L HSE+LA+ FA++ +
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPA---- 770
Query: 537 RSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
++ IRI KN+R+C DCH+ K S + +EI+VRDSNRFHHFK+ +CSC DYW
Sbjct: 771 KTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 193/395 (48%), Gaps = 32/395 (8%)
Query: 10 TLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMP 69
TLF C N++ A LH ++ + Q++ ++ L+N+Y G + ARH FD +
Sbjct: 59 TLFRYCT---NLQSAKCLHARLV--VSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 70 KRNVVSWTALISGYAQHGNAEE---CFRLFCSLLQYFFPNEFSLASVLISC-DYLHGKLV 125
R+V +W +ISGY + GN+ E CF LF L P+ + SVL +C + G +
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFM-LSSGLTPDYRTFPSVLKACRTVIDGNKI 172
Query: 126 HALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
H LALKF VYVA +LI++YS+ A +F+ M R++ SWN+MI+ +
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY------ 226
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ N +EAL L L+ A D T +L AC +HS K
Sbjct: 227 -------CQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
+G E + ++N LI YA G + ++VFD+M DL+SWNSI+KAY L+ Q A+ L
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 305 FSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLG 361
F M +QPD T +SL S S G ++ V L + + +V +
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 362 RVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHG 396
++G + A + +P D + W+ ++ ++G
Sbjct: 396 KLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNG 429
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 14/182 (7%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ ++ AC+ G ++Q M+LH ++ N D+FV L +MY K G L+DA LF +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQ 511
Query: 68 MPKRNVVSWTALISGYAQHGNAEECFRLFCSLL-QYFFPNEFSLASVLISCDYLHGKLV- 125
+P+ N V W LI+ + HG+ E+ LF +L + P+ + ++L +C H LV
Sbjct: 512 IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS--HSGLVD 569
Query: 126 ------HALALKFSLDAHVYVANALINMYSKSCADE-AWKVFENMEFRNVIS-WNSMIAA 177
+ + + + +++MY ++ E A K ++M + S W ++++A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 178 FR 179
R
Sbjct: 630 CR 631
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 7 IYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGY---LDDARH 63
I+ L AC +HGN+ EH+ F EP+ + L NMYA G +D+ R
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHL---FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRS 678
Query: 64 LFDEMPKRNVVSWTAL---------ISGYAQHGNAEECFRLFCSL 99
+ R W+++ +G H EE +R +L
Sbjct: 679 IAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 723
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/631 (35%), Positives = 332/631 (52%), Gaps = 75/631 (11%)
Query: 15 CALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVV 74
CA G QLH + + Q++FV N L++MYAK G +D+A +F M ++VV
Sbjct: 239 CASLGTHSLGKQLHCFAVTS--EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 75 SWTALISGYAQHGNAEECFRLFCSL-----------------------LQY--------- 102
SW A+++GY+Q G E+ RLF + L Y
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 103 ----FFPNEFSLASVLISCD----YLHGKLVHALALKFSLDAHV-------YVANALINM 147
PNE +L SVL C +HGK +H A+K+ +D V N LI+M
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 148 YSK-SCADEAWKVFENM--EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLF 204
Y+K D A +F+++ + R+V++W MI + +A+EL ++M E+
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ---- 472
Query: 205 RQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV---IANALIHAY 261
P+ T S L ACA L R +H+ + + + V ++N LI Y
Sbjct: 473 -------TRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMY 523
Query: 262 ARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFV 318
A+CGSIS ++ VFD M + V+W S++ Y +HG +EAL +F M + D T +
Sbjct: 524 AKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 319 SLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPM 378
+L ACSH+G++ +G + F+ M GV P +HYAC+VDLLGR GR+ A +LI EMPM
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Query: 379 EPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLI 438
EP V+W L CR HG+ L E AA K+ +L + +SN+Y +G + I
Sbjct: 644 EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 439 RKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPET 498
R M+ V+K PG SW+E F G K HP + I++ L + + ++K +GYVPET
Sbjct: 704 RSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 763
Query: 499 SLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKL 558
ALHD+++E K++ L+ HSEKLAL + I+ + + IRI KN+R+C DCH
Sbjct: 764 GFALHDVDDEEKDDLLFEHSEKLALAYGILTT----PQGAAIRITKNLRVCGDCHTAFTY 819
Query: 559 ASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
S ++ +I++RDS+RFHHFK+ CSC YW
Sbjct: 820 MSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 207/433 (47%), Gaps = 48/433 (11%)
Query: 8 YATLFHACALHGNIKQAMQLHE-HMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFD 66
+ +F AC +++ H ++ F + ++FV N L+ MY++ L DAR +FD
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFIS---NVFVGNALVAMYSRCRSLSDARKVFD 186
Query: 67 EMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF--PNEFSLASVLISCDYLH--- 121
EM +VVSW ++I YA+ G + +F + F P+ +L +VL C L
Sbjct: 187 EMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS 246
Query: 122 -GKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSMIAAFR 179
GK +H A+ + +++V N L++MY+K DEA VF NM ++V+SWN+M+A +
Sbjct: 247 LGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 180 ACKLEAQAIELFAKMKNEE----------------------EALFLFRQLQREGMAPDWC 217
A+ LF KM+ E+ EAL + RQ+ G+ P+
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 218 TFSIVLKACAGLVTERHASAVHSLIAKY-------GFEDDTVIANALIHAYARCGSISLS 270
T VL CA + H +H KY G D+ ++ N LI YA+C + +
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 271 KQVFDKMTY--HDLVSWNSILKAYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSA 323
+ +FD ++ D+V+W ++ Y+ HG A +AL+L S M +P++ T L A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 324 CSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSV 383
C+ ++ G ++ L N L C++D+ + G I +A +L+ + M + V
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDNMMAKNEV 545
Query: 384 IWSVLLGSCRKHG 396
W+ L+ HG
Sbjct: 546 TWTSLMTGYGMHG 558
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 198/457 (43%), Gaps = 83/457 (18%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARH 63
+ +I H C I Q +H+ +++ L +T+HLI+ Y G L A
Sbjct: 27 APEITPPFIHKCK---TISQVKLIHQKLLSF---GILTLNLTSHLISTYISVGCLSHAVS 80
Query: 64 LFDEMPKRN--VVSWTALISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYL 120
L P + V W +LI Y +G A +C LF + + P+ ++ V +C +
Sbjct: 81 LLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI 140
Query: 121 H----GKLVHALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMI 175
G+ HAL+L ++V+V NAL+ MYS+ + +A KVF+ M +V+SWNS+I
Sbjct: 141 SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200
Query: 176 AAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHA 235
++ A+E+F++M NE G PD T VL CA L T
Sbjct: 201 ESYAKLGKPKVALEMFSRMTNEF------------GCRPDNITLVNVLPPCASLGTHSLG 248
Query: 236 SAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALH 295
+H + + N L+ YA+CG + + VF M+ D+VSWN+++ Y+
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 296 GQAKEALQLFSNM--------------------------------------NVQPDSATF 317
G+ ++A++LF M ++P+ T
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 318 VSLLSACSHAGLVQEGNKVFHSMLE--------NHG----VVPQLDHYACMVDLLGRVGR 365
+S+LS C+ G + G ++ ++ HG V+ QL +D+ + +
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL------IDMYAKCKK 422
Query: 366 ILEAEKLIREM-PMEPDSVIWSVLLGSCRKHGETRLA 401
+ A + + P E D V W+V++G +HG+ A
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 30/311 (9%)
Query: 101 QYFFPNEFSLASVLISCDYLHG-------KLVHALALKFSLDAHVYVANALINMY-SKSC 152
QY + FS ++ I+ ++H KL+H L F + + + + LI+ Y S C
Sbjct: 16 QYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGC 74
Query: 153 ADEAWKVFENMEFRN--VISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQRE 210
A + + V WNS+I ++ + L+LF +
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSY-------------GDNGCANKCLYLFGLMHSL 121
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLS 270
PD TF V KAC + + R + H+L GF + + NAL+ Y+RC S+S +
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 271 KQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNMN----VQPDSATFVSLLSACSH 326
++VFD+M+ D+VSWNSI+++YA G+ K AL++FS M +PD+ T V++L C+
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G G K H ++ + C+VD+ + G + EA + M ++ D V W+
Sbjct: 242 LGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWN 299
Query: 387 VLLGSCRKHGE 397
++ + G
Sbjct: 300 AMVAGYSQIGR 310
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/596 (35%), Positives = 333/596 (55%), Gaps = 30/596 (5%)
Query: 20 NIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTA 78
++ + +Q+H ++ +N P+ + L YA G + + LF + ++ +TA
Sbjct: 41 SVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 100
Query: 79 LISGYAQHGNAEECFRLFCSLLQY-FFPNEFSLASVLISCDYLHGKLVHALALKFSLDAH 137
I+ + +G ++ F L+ LL PNEF+ +S+L SC GKL+H LKF L
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGID 160
Query: 138 VYVANALINMYSKSC-ADEAWKVFENMEFRNVISWNSMIAAF-RACKLEAQ--------- 186
YVA L+++Y+K A KVF+ M R+++S +MI + + +EA
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCE 220
Query: 187 --------AIELFAKMKNEEEALFLFRQLQREGMA-PDWCTFSIVLKACAGLVTERHASA 237
I+ +A+ +AL LF++L EG PD T L AC+ +
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H + + + LI Y++CGS+ + VF+ D+V+WN+++ YA+HG
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
+++AL+LF+ M +QP TF+ L AC+HAGLV EG ++F SM + +G+ P+++HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 354 ACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEP 413
C+V LLGR G++ A + I+ M M+ DSV+WS +LGSC+ HG+ L + A L L
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 414 GDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKRHP 473
+S +V +SNIY G + +R MK + K PG+S IEIEN+VHEF +G + H
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 474 QREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKLALVFAIMNQGSL 533
+ + I+ L ++ ++K GYVP T+ L D+EE KE+ L HSE+LA+ + +++
Sbjct: 521 KSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLIS---- 576
Query: 534 CRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ S ++I KN+R+C DCH KL S + G++IV+RD NRFHHF D CSC D+W
Sbjct: 577 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/608 (35%), Positives = 335/608 (55%), Gaps = 36/608 (5%)
Query: 11 LFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPK 70
+ ACA +++ +++ I N E DL V+ L++MY K +D A+ LFDE
Sbjct: 242 VISACAKLEDLETGEKVYA-FIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 71 RNVVSWTALISGYAQHGNAEECFRLFCSLLQYFF-PNEFSLASVLISCDYLH----GKLV 125
N+ A+ S Y + G E +F ++ P+ S+ S + SC L GK
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 126 HALALKFSLDAHVYVANALINMYSKSC--ADEAWKVFENMEFRNVISWNSMIAAFRACKL 183
H L+ ++ + NALI+MY K C D A+++F+ M + V++WNS++A +
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMK-CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 184 EAQAIELFAKMKNE------------------EEALFLFRQLQ-REGMAPDWCTFSIVLK 224
A E F M + EEA+ +F +Q +EG+ D T +
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 225 ACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVS 284
AC L A ++ I K G + D + L+ ++RCG + +F+ +T D+ +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 285 WNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSML 341
W + + A A+ G A+ A++LF +M ++PD FV L+ACSH GLVQ+G ++F+SML
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 342 ENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLA 401
+ HGV P+ HY CMVDLLGR G + EA +LI +MPMEP+ VIW+ LL +CR G +A
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Query: 402 ELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENR 461
AA K++ L P + +V +SN+Y +G +N +R MK +RK PG S I+I +
Sbjct: 659 AYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGK 718
Query: 462 VHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKEEQLYHHSEKL 521
HEF SG + HP+ I L+E+ + +G+VP+ S L D++E+ K L HSEKL
Sbjct: 719 THEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKL 778
Query: 522 ALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDR 581
A+ + +++ + + IRI+KN+R+C DCH+F K AS + +EI++RD+NRFH+ +
Sbjct: 779 AMAYGLISS----NKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQG 834
Query: 582 ICSCNDYW 589
CSC D+W
Sbjct: 835 KCSCGDFW 842
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 168/342 (49%), Gaps = 23/342 (6%)
Query: 12 FHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKR 71
ACA +Q+H ++ +DLFV N L++ YA+ G LD AR +FDEM +R
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVK--MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 72 NVVSWTALISGYAQHGNAEECFRLFCSLL--QYFFPNEFSLASVLISC----DYLHGKLV 125
NVVSWT++I GYA+ A++ LF ++ + PN ++ V+ +C D G+ V
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 126 HALALKFSLDAHVYVANALINMYSKSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLE 184
+A ++ + + +AL++MY K A D A ++F+ N+ N+M +
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN------- 311
Query: 185 AQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAK 244
+ + EAL +F + G+ PD + + +C+ L + H + +
Sbjct: 312 ------YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 245 YGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQL 304
GFE I NALI Y +C + ++FD+M+ +V+WNSI+ Y +G+ A +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 305 FSNMNVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGV 346
F M + + ++ +++S L +E +VF SM GV
Sbjct: 426 FETMP-EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 23/262 (8%)
Query: 123 KLVHALALKFSLDAHVYVANALI----NMYSKSCADEAWKVFENME-FRNVISWNSMIAA 177
K+ H K LD V L+ + ++ A +VFEN E + +NS+I
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 178 FRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERHASA 237
+ + L +AI LF +M N G++PD TF L ACA + +
Sbjct: 109 YASSGLCNEAILLFLRMMNS-------------GISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 238 VHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYALHGQ 297
+H LI K G+ D + N+L+H YA CG + +++VFD+M+ ++VSW S++ YA
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 298 AKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLDHY 353
AK+A+ LF M V P+S T V ++SAC+ ++ G KV+ + + N G+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMV 274
Query: 354 ACMVDLLGRVGRILEAEKLIRE 375
+ +VD+ + I A++L E
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDE 296
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 334/599 (55%), Gaps = 36/599 (6%)
Query: 4 STQIYATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKF---GYLDD 60
+TQ L C ++++ MQ+ + I + +D+ LIN + +
Sbjct: 28 NTQNPILLISKC---NSLRELMQIQAYAIKS---HIEDVSFVAKLINFCTESPTESSMSY 81
Query: 61 ARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSLLQ-YFFPNEFSLASVLISCDY 119
ARHLF+ M + ++V + ++ GY++ N E F LF +L+ P+ ++ S+L +C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 120 L----HGKLVHALALKFSLDAHVYVANALINMYSK-SCADEAWKVFENMEFRNVISWNSM 174
G+ +H L++K LD +VYV LINMY++ D A VF+ + V+ +N+M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 175 IAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTERH 234
I + A+ EAL LFR++Q + + P+ T VL +CA L +
Sbjct: 202 ITGY-------------ARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL 248
Query: 235 ASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILKAYAL 294
+H K+ F + ALI +A+CGS+ + +F+KM Y D +W++++ AYA
Sbjct: 249 GKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYAN 308
Query: 295 HGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHGVVPQLD 351
HG+A++++ +F M NVQPD TF+ LL+ACSH G V+EG K F M+ G+VP +
Sbjct: 309 HGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIK 368
Query: 352 HYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQL 411
HY MVDLL R G + +A + I ++P+ P ++W +LL +C H LAE + ++ +L
Sbjct: 369 HYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
Query: 412 EPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIEIENRVHEFASGGKR 471
+ +V +SN+Y + + +RK MK + K PG S IE+ N VHEF SG
Sbjct: 429 DDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGV 488
Query: 472 HPQREAIFKKLEELIGQLKGMGYVPETSLALH-DIEEEHKEEQLYHHSEKLALVFAIMNQ 530
+ + L+E++ +LK GYVP+TS+ +H ++ ++ KE L +HSEKLA+ F ++N
Sbjct: 489 KSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNT 548
Query: 531 GSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRFHHFKDRICSCNDYW 589
+ IR++KN+R+C DCHN KL S + G+++V+RD RFHHF+D CSC D+W
Sbjct: 549 PP----GTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/614 (36%), Positives = 333/614 (54%), Gaps = 49/614 (7%)
Query: 3 HSTQIYATLFHACALHGNIKQAMQLHEHMI-NNFPNEPQDLFVTNHLINMYAKFGYLDDA 61
H +I+ +L C+ ++ Q QLH + +P EP LF+ ++ + + F ++ A
Sbjct: 47 HHQRIF-SLAETCS---DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYA 102
Query: 62 RHLFDEMPKRNVVSWTALISGYAQH-GNAEECFRLFCSLLQY--FFPNEFSLASVLISCD 118
+FD + + W LI A EE F L+ +L+ P++ + VL +C
Sbjct: 103 FRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACA 162
Query: 119 YL----HGKLVHALALKFSLDAHVYVANALINMY-SKSCADEAWKVFENMEFRNVISWNS 173
Y+ GK VH +K VYV N LI++Y S C D A KVF+ M R+++SWNS
Sbjct: 163 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 222
Query: 174 MIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQREGMAPDWCTFSIVLKACAGLVTER 233
MI A + + AL LFR++QR PD T VL ACAGL +
Sbjct: 223 MIDAL-------------VRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLS 268
Query: 234 HASAVHSLIAKYGFED---DTVIANALIHAYARCGSISLSKQVFDKMTYHDLVSWNSILK 290
+ H+ + + D D ++ N+LI Y +CGS+ +++QVF M DL SWN+++
Sbjct: 269 LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMIL 328
Query: 291 AYALHGQAKEALQLFSNM-----NVQPDSATFVSLLSACSHAGLVQEGNKVFHSMLENHG 345
+A HG+A+EA+ F M NV+P+S TFV LL AC+H G V +G + F M+ ++
Sbjct: 329 GFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYC 388
Query: 346 VVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGSCRKHGET-RLAELA 404
+ P L+HY C+VDL+ R G I EA ++ MPM+PD+VIW LL +C K G + L+E
Sbjct: 389 IEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEI 448
Query: 405 ATKL------KQLEPGDSLG-FVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYPGLSWIE 457
A + + G+ G +V +S +Y + +N ++RK M +RK PG S IE
Sbjct: 449 ARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIE 508
Query: 458 IENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLA--LHDIEEEHKEEQLY 515
I HEF +G HPQ + I+++L+ + +L+ +GY+P+ S A + + KE L
Sbjct: 509 INGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLR 568
Query: 516 HHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRDSNRF 575
HSE+LA+ F ++N ++ IRI KN+R+C DCH KL S + EI+VRD RF
Sbjct: 569 LHSERLAIAFGLIN----LPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRF 624
Query: 576 HHFKDRICSCNDYW 589
HHFKD CSC DYW
Sbjct: 625 HHFKDGSCSCLDYW 638
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 333/625 (53%), Gaps = 56/625 (8%)
Query: 4 STQIYATLFHACALHGNIKQAMQLH---------------EHMIN------NFPN----- 37
+T ++ +C ++ QLH H+++ +FP+
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 38 ---EPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
++ +N LIN Y + G L +AR +FDEMP R + +W A+I+G Q EE
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 162
Query: 95 LFCSLLQY-FFPNEFSLASVLISCDYLH----GKLVHALALKFSLDAHVYVANALINMYS 149
LF + F P+E++L SV L G+ +H +K+ L+ + V ++L +MY
Sbjct: 163 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 222
Query: 150 KSCA-DEAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQLQ 208
++ + V +M RN+++WN++I A+ E L+L++ ++
Sbjct: 223 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGN-------------AQNGCPETVLYLYKMMK 269
Query: 209 REGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSIS 268
G P+ TF VL +C+ L +H+ K G + ++LI Y++CG +
Sbjct: 270 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 329
Query: 269 LSKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSAC 324
+ + F + D V W+S++ AY HGQ EA++LF+ M N++ + F++LL AC
Sbjct: 330 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 389
Query: 325 SHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVI 384
SH+GL +G ++F M+E +G P L HY C+VDLLGR G + +AE +IR MP++ D VI
Sbjct: 390 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 449
Query: 385 WSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKG 444
W LL +C H +A+ ++ Q++P DS +V ++N++ + + +RK M+
Sbjct: 450 WKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRD 509
Query: 445 SRVRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHD 504
V+K G+SW E + VH+F G + + + I+ L+EL ++K GY P+T+ LHD
Sbjct: 510 KNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHD 569
Query: 505 IEEEHKEEQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLG 564
++EE KE L HSEKLA+ FA+M + E + IRI+KN+R+C DCH K S +
Sbjct: 570 MDEEEKESDLVQHSEKLAVAFALM----ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKN 625
Query: 565 KEIVVRDSNRFHHFKDRICSCNDYW 589
+EI +RD +RFHHF + CSC DYW
Sbjct: 626 REITLRDGSRFHHFINGKCSCGDYW 650
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/566 (37%), Positives = 325/566 (57%), Gaps = 39/566 (6%)
Query: 44 VTNHLINMYAKFGYLDDARHLFDEMPK-RNVVSWTALISGYAQHGNAEECFRLFCSLL-Q 101
V N + Y+K G L +A +F M + R+ VSW ++I Y QH + L+ ++ +
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 102 YFFPNEFSLASVL---ISCDYL-HGKLVHALALKFSLDAHVYVANALINMYSKSCAD--- 154
F + F+LASVL S D+L G+ H +K + +V + LI+ YSK C
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK-CGGCDG 293
Query: 155 --EAWKVFENMEFRNVISWNSMIAAFRACKLEAQAIELFAKMKNE--EEALFLFRQLQRE 210
++ KVF+ + +++ WN+MI+ + M E EEA+ FRQ+QR
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGY--------------SMNEELSEEAVKSFRQMQRI 339
Query: 211 GMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTV-IANALIHAYARCGSISL 269
G PD C+F V AC+ L + +H L K + + + NALI Y + G++
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD 399
Query: 270 SKQVFDKMTYHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSH 326
++ VFD+M + VS+N ++K YA HG EAL L+ M + P+ TFV++LSAC+H
Sbjct: 400 ARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH 459
Query: 327 AGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWS 386
G V EG + F++M E + P+ +HY+CM+DLLGR G++ EAE+ I MP +P SV W+
Sbjct: 460 CGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519
Query: 387 VLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSR 446
LLG+CRKH LAE AA +L ++P + +V ++N+Y + + + +RK M+G R
Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKR 579
Query: 447 VRKYPGLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIE 506
+RK PG SWIE++ + H F + HP + + LEE++ ++K +GYV + A+ +
Sbjct: 580 IRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKED 639
Query: 507 EEHKEE---QLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLL 563
E + + +L HHSEKLA+ F +M+ R+ + ++KN+RIC DCHN +K S +
Sbjct: 640 EAGEGDEEMRLGHHSEKLAVAFGLMST----RDGEELVVVKNLRICGDCHNAIKFMSAVA 695
Query: 564 GKEIVVRDSNRFHHFKDRICSCNDYW 589
G+EI+VRD+ RFH FKD CSC DYW
Sbjct: 696 GREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 186/376 (49%), Gaps = 30/376 (7%)
Query: 35 FPNEPQDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFR 94
+ E ++F N ++ YAK + AR LFDE+P+ + VS+ LISGYA
Sbjct: 67 YSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV 126
Query: 95 LFCSLLQYFFP-NEFSLASVLISC----DYLHGKLVHALALKFSLDAHVYVANALINMYS 149
LF + + F + F+L+ ++ +C D + K +H ++ D++ V NA + YS
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYS 184
Query: 150 K-SCADEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K EA VF M E R+ +SWNSMI A + + K +AL L++++
Sbjct: 185 KGGLLREAVSVFYGMDELRDEVSWNSMIVA-------------YGQHKEGAKALALYKEM 231
Query: 208 QREGMAPDWCTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG-- 265
+G D T + VL A L H + K GF ++ + + LI Y++CG
Sbjct: 232 IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291
Query: 266 -SISLSKQVFDKMTYHDLVSWNSILKAYALHGQ-AKEALQLFSNMNV---QPDSATFVSL 320
+ S++VF ++ DLV WN+++ Y+++ + ++EA++ F M +PD +FV +
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 321 LSACSHAGLVQEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEP 380
SACS+ + ++ +++H ++ ++ L + G + +A + MP E
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-EL 410
Query: 381 DSVIWSVLLGSCRKHG 396
++V ++ ++ +HG
Sbjct: 411 NAVSFNCMIKGYAQHG 426
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 150/325 (46%), Gaps = 40/325 (12%)
Query: 118 DYLHGKLVHALALKFSLDAHVYVANALINMYSKSCA--DEAWKVFENMEFRNVISWNSMI 175
D GK +HAL +K + + Y++N +N+YSK C A F + E NV S+N ++
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSK-CGRLSYARAAFYSTEEPNVFSYNVIV 81
Query: 176 AAFRACKLEAQAIELFAKMKNEEE------------------ALFLFRQLQREGMAPDWC 217
A+ A +LF ++ + A+ LF+++++ G D
Sbjct: 82 KAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGF 141
Query: 218 TFSIVLKAC---AGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVF 274
T S ++ AC L+ + H +V GF+ + + NA + Y++ G + + VF
Sbjct: 142 TLSGLIAACCDRVDLIKQLHCFSVSG-----GFDSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 275 DKMT-YHDLVSWNSILKAYALHGQAKEALQLFSNM---NVQPDSATFVSLLSACSHAGLV 330
M D VSWNS++ AY H + +AL L+ M + D T S+L+A + +
Sbjct: 197 YGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHL 256
Query: 331 QEGNKVFHSMLENHGVVPQLDHYACMVDLLGRVG---RILEAEKLIREMPMEPDSVIWSV 387
G + FH L G + ++D + G + ++EK+ +E+ + PD V+W+
Sbjct: 257 I-GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNT 314
Query: 388 LLGSCRKHGETRLAELAATKLKQLE 412
++ + E L+E A +Q++
Sbjct: 315 MISGYSMNEE--LSEEAVKSFRQMQ 337
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 8 YATLFHACALHGNIKQAMQLHEHMINNFPNEPQDLFVTNHLINMYAKFGYLDDARHLFDE 67
+ + ACA G + + + M F EP+ + +I++ + G L++A D
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC-MIDLLGRAGKLEEAERFIDA 508
Query: 68 MP-KRNVVSWTALISGYAQHGN 88
MP K V+W AL+ +H N
Sbjct: 509 MPYKPGSVAWAALLGACRKHKN 530
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/498 (39%), Positives = 286/498 (57%), Gaps = 35/498 (7%)
Query: 122 GKLVHALALKFSLDAHVYVANALINMYSKSCAD--EAWKVFENMEFRNVISWNSMIAAFR 179
G+ HA L F LD +V +L+NMYS SC D A +VF++ +++ +WNS++ A+
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYS-SCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 180 ACKLEAQAIELFAKMKNE------------------EEALFLFRQLQREG-----MAPDW 216
L A +LF +M +EAL LFR++Q + P+
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 217 CTFSIVLKACAGLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCGSISLSKQVFDK 276
T S VL AC L VH+ I KY E D V+ ALI YA+CGS+ +K+VF+
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 277 M-TYHDLVSWNSILKAYALHGQAKEALQLFSNM----NVQPDSATFVSLLSACSHAGLVQ 331
+ + D+ ++++++ A++G E QLFS M N+ P+S TFV +L AC H GL+
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 332 EGNKVFHSMLENHGVVPQLDHYACMVDLLGRVGRILEAEKLIREMPMEPDSVIWSVLLGS 391
EG F M+E G+ P + HY CMVDL GR G I EAE I MPMEPD +IW LL
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 392 CRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYCLSGSFNKARLIRKEMKGSRVRKYP 451
R G+ + E A +L +L+P +S +V +SN+Y +G + + + IR EM+ + K P
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVP 439
Query: 452 GLSWIEIENRVHEFASGGKRHPQREAIFKKLEELIGQLKGMGYVPETSLALHDIEEEHKE 511
G S++E+E VHEF G + + E I+ L+E++ +L+ GYV +T L D+ E+ KE
Sbjct: 440 GCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKE 499
Query: 512 EQLYHHSEKLALVFAIMNQGSLCRERSVIRIMKNIRICVDCHNFMKLASDLLGKEIVVRD 571
L +HSEKLA+ F +M R + +RI+KN+RIC DCH MK+ S L +EIVVRD
Sbjct: 500 IALSYHSEKLAIAFCLMKT----RPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRD 555
Query: 572 SNRFHHFKDRICSCNDYW 589
NRFHHF+D CSC D+W
Sbjct: 556 CNRFHHFRDGSCSCRDFW 573
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 32/319 (10%)
Query: 40 QDLFVTNHLINMYAKFGYLDDARHLFDEMPKRNVVSWTALISGYAQHGNAEECFRLFCSL 99
+DL N ++N YAK G +DDAR LFDEMP+RNV+SW+ LI+GY G +E LF +
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 100 L------QYFFPNEFSLASVLISCDYL----HGKLVHALALKFSLDAHVYVANALINMYS 149
+ PNEF++++VL +C L GK VHA K+ ++ + + ALI+MY+
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 150 KSCA-DEAWKVFENM-EFRNVISWNSMIAAFRACKLEAQAIELFAKMKNEEEALFLFRQL 207
K + + A +VF + ++V ++++MI L + +LF++M +
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN-------- 297
Query: 208 QREGMAPDWCTFSIVLKACA--GLVTERHASAVHSLIAKYGFEDDTVIANALIHAYARCG 265
+ P+ TF +L AC GL+ E S +I ++G ++ Y R G
Sbjct: 298 ----INPNSVTFVGILGACVHRGLINE-GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSG 352
Query: 266 SISLSKQVFDKMTYH-DLVSWNSILKAYALHGQAKE---ALQLFSNMNVQPDSATFVSLL 321
I ++ M D++ W S+L + G K AL+ ++ +S +V L
Sbjct: 353 LIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPM-NSGAYVLLS 411
Query: 322 SACSHAGLVQEGNKVFHSM 340
+ + G E + H M
Sbjct: 412 NVYAKTGRWMEVKCIRHEM 430
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,811,440
Number of Sequences: 539616
Number of extensions: 8792633
Number of successful extensions: 35501
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 27955
Number of HSP's gapped (non-prelim): 1882
length of query: 589
length of database: 191,569,459
effective HSP length: 123
effective length of query: 466
effective length of database: 125,196,691
effective search space: 58341658006
effective search space used: 58341658006
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)