BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043492
PLFIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEV
DAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSA
LVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQF
FNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVA
FLKAYFDSEGDDFKTILADPSVAPITLGQVEFIPAPSS

High Scoring Gene Products

Symbol, full name Information P value
CLH1
chlorophyllase 1
protein from Arabidopsis thaliana 2.5e-58
CLH2
chlorophyllase 2
protein from Arabidopsis thaliana 3.0e-46

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043492
        (278 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013129 - symbol:CLH1 "chlorophyllase 1" speci...   599  2.5e-58   1
TAIR|locus:2170852 - symbol:CLH2 "chlorophyllase 2" speci...   485  3.0e-46   1


>TAIR|locus:2013129 [details] [associations]
            symbol:CLH1 "chlorophyllase 1" species:3702 "Arabidopsis
            thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0047746
            "chlorophyllase activity" evidence=IEA;IDA] [GO:0015996
            "chlorophyll catabolic process" evidence=IDA] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0042742 "defense response to bacterium"
            evidence=IMP] [GO:0050832 "defense response to fungus"
            evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=RCA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0009617 "response to bacterium" evidence=RCA] [GO:0009862
            "systemic acquired resistance, salicylic acid mediated signaling
            pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
            signaling pathway" evidence=RCA] [GO:0010310 "regulation of
            hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            [GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
            InterPro:IPR010821 InterPro:IPR017395 Pfam:PF07224
            PIRSF:PIRSF038128 UniPathway:UPA00674 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005773 GO:GO:0006950 EMBL:AC007797
            EMBL:AF021244 EMBL:AY099815 EMBL:BT000309 IPI:IPI00547500
            PIR:E86329 RefSeq:NP_564094.1 UniGene:At.19779
            ProteinModelPortal:O22527 SMR:O22527 STRING:O22527 PaxDb:O22527
            PRIDE:O22527 EnsemblPlants:AT1G19670.1 GeneID:838554
            KEGG:ath:AT1G19670 GeneFarm:1723 TAIR:At1g19670 eggNOG:NOG238435
            HOGENOM:HOG000005711 InParanoid:O22527 KO:K08099 OMA:INWASEN
            PhylomeDB:O22527 ProtClustDB:PLN00021
            BioCyc:MetaCyc:AT1G19670-MONOMER BRENDA:3.1.1.14
            Genevestigator:O22527 GermOnline:AT1G19670 GO:GO:0047746
            GO:GO:0015996 Uniprot:O22527
        Length = 324

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 128/270 (47%), Positives = 167/270 (61%)

Query:     1 PLFIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEV 60
             P+ I  P   G Y V+LFF G  + N  YS + +H+ASHGYI+V+PQL  L+PP G  EV
Sbjct:    44 PVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQVEV 103

Query:    61 DAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSA 120
             D A   INW  + L++HLP +V A+  Y++L+GHSRGG TAFA+A G+A      + FSA
Sbjct:   104 DDAGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSA 163

Query:   121 LVGVDPVAGIPYFHSELDPPILDY--ESFNFSIPVTVIGTGLGGLAKCVVP-CAPEKENH 177
             L+G+DPVAG   +    DP IL Y  ESF   IPV V+GTGLG     V+P CAP   NH
Sbjct:   164 LIGIDPVAGTNKY-IRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNH 222

Query:   178 QQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGI 237
             ++F+  C ++ +AHF A  YGHMD+LDD  P      ++ CMC NG   +  MR  V GI
Sbjct:   223 EEFYKECKAT-KAHFVAADYGHMDMLDDDLPGFVGF-MAGCMCKNGQRKKSEMRSFVGGI 280

Query:   238 AVAFLKAYFDSEGDDFKTILADPSVAPITL 267
              VAFLK     E  + + I+ DPSV+P  L
Sbjct:   281 VVAFLKYSLWGEKAEIRLIVKDPSVSPAKL 310


>TAIR|locus:2170852 [details] [associations]
            symbol:CLH2 "chlorophyllase 2" species:3702 "Arabidopsis
            thaliana" [GO:0009507 "chloroplast" evidence=ISM;ISS] [GO:0015996
            "chlorophyll catabolic process" evidence=IEA;IDA] [GO:0043231
            "intracellular membrane-bounded organelle" evidence=IEA]
            [GO:0047746 "chlorophyllase activity" evidence=IEA;IDA]
            InterPro:IPR010821 InterPro:IPR017395 Pfam:PF07224
            PIRSF:PIRSF038128 UniPathway:UPA00674 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0031969 GO:GO:0016023
            EMBL:AB026651 HOGENOM:HOG000005711 KO:K08099 ProtClustDB:PLN00021
            BRENDA:3.1.1.14 GO:GO:0047746 GO:GO:0015996 EMBL:AF134302
            EMBL:BT002898 IPI:IPI00545422 RefSeq:NP_199199.1 UniGene:At.9045
            ProteinModelPortal:Q9M7I7 SMR:Q9M7I7 STRING:Q9M7I7 PaxDb:Q9M7I7
            PRIDE:Q9M7I7 EnsemblPlants:AT5G43860.1 GeneID:834408
            KEGG:ath:AT5G43860 GeneFarm:1727 TAIR:At5g43860 eggNOG:NOG238272
            InParanoid:Q9M7I7 OMA:PLFPPCA PhylomeDB:Q9M7I7
            BioCyc:ARA:AT5G43860-MONOMER BioCyc:MetaCyc:AT5G43860-MONOMER
            Genevestigator:Q9M7I7 GermOnline:AT5G43860 Uniprot:Q9M7I7
        Length = 318

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 110/259 (42%), Positives = 155/259 (59%)

Query:     2 LFIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVD 61
             L +  P  +G Y V++   G  + N+ YS+L  H++SHG+I+++PQLY++  P    E+ 
Sbjct:    45 LLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGPDTMDEIK 104

Query:    62 AAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQ---GYATNPPLGLKF 118
             + AE ++WL  GL   LP  V  +L+  AL GHSRGG TAFA+A    GY++N    LK 
Sbjct:   105 STAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSN----LKI 160

Query:   119 SALVGVDPVAGIPYFHSELDPPILDY--ESFNFS-IPVTVIGTGLGGLAKCVV--PCAPE 173
             S L+G+DPV G      +  PP+L Y   SF+    P+ VIG+GLG  A+  +  PCAP 
Sbjct:   161 STLIGIDPVDGTGK-GKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPP 219

Query:   174 KENHQQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQC 233
               NH++FF  C      HF A  YGH+D+LDD    ++  + S C+C NG   R+PMR+ 
Sbjct:   220 GVNHREFFREC-QGPAWHFVAKDYGHLDMLDDDTKGIRGKS-SYCLCKNGE-ERRPMRRF 276

Query:   234 VSGIAVAFLKAYFDSEGDD 252
             V G+ V+FLKAY   EGDD
Sbjct:   277 VGGLVVSFLKAYL--EGDD 293


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      278       278   0.00081  115 3  11 22  0.36    34
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  210 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.59u 0.16s 22.75t   Elapsed:  00:00:01
  Total cpu time:  22.59u 0.16s 22.75t   Elapsed:  00:00:01
  Start:  Fri May 10 05:28:02 2013   End:  Fri May 10 05:28:03 2013

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