Query 043492
Match_columns 278
No_of_seqs 210 out of 2535
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 05:37:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043492.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043492hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF07224 Chlorophyllase: Chlor 100.0 6.4E-47 1.4E-51 302.8 23.5 268 1-276 34-304 (307)
2 PF12740 Chlorophyllase2: Chlo 100.0 5.5E-43 1.2E-47 286.6 23.4 250 1-253 5-258 (259)
3 PLN00021 chlorophyllase 100.0 5.4E-41 1.2E-45 287.9 27.1 270 1-275 40-313 (313)
4 PF03403 PAF-AH_p_II: Platelet 100.0 1.9E-27 4.2E-32 209.0 15.2 205 11-248 98-361 (379)
5 COG4188 Predicted dienelactone 99.9 3E-26 6.5E-31 194.4 15.3 230 1-250 53-358 (365)
6 KOG3847 Phospholipase A2 (plat 99.9 1.5E-23 3.2E-28 172.2 14.7 210 10-249 115-375 (399)
7 PLN02385 hydrolase; alpha/beta 99.9 4.5E-20 9.7E-25 162.3 21.3 208 4-247 78-347 (349)
8 PF12695 Abhydrolase_5: Alpha/ 99.9 8.1E-21 1.7E-25 145.7 13.9 145 15-200 1-145 (145)
9 PHA02857 monoglyceride lipase; 99.9 7.4E-20 1.6E-24 155.6 20.7 202 3-245 16-273 (276)
10 PLN02298 hydrolase, alpha/beta 99.9 6.2E-20 1.3E-24 160.2 20.1 209 5-249 50-321 (330)
11 PRK13604 luxD acyl transferase 99.8 1.4E-19 3.1E-24 152.8 18.4 174 3-204 25-247 (307)
12 COG2267 PldB Lysophospholipase 99.8 4.3E-18 9.4E-23 145.7 21.2 196 14-247 35-296 (298)
13 PF01738 DLH: Dienelactone hyd 99.8 5E-19 1.1E-23 145.5 14.8 203 2-246 3-218 (218)
14 PRK10566 esterase; Provisional 99.8 9.8E-19 2.1E-23 146.5 16.7 182 3-200 15-232 (249)
15 KOG1455 Lysophospholipase [Lip 99.8 2E-18 4.4E-23 142.5 17.3 205 5-245 45-312 (313)
16 PLN02652 hydrolase; alpha/beta 99.8 4.3E-18 9.3E-23 151.2 20.5 199 3-247 126-389 (395)
17 PRK05077 frsA fermentation/res 99.8 5.5E-18 1.2E-22 151.6 20.4 173 1-197 182-392 (414)
18 PRK10749 lysophospholipase L2; 99.8 3.6E-18 7.9E-23 149.0 18.8 108 12-128 53-166 (330)
19 COG1506 DAP2 Dipeptidyl aminop 99.8 2.8E-18 6.2E-23 160.9 17.2 200 2-248 380-619 (620)
20 PLN02894 hydrolase, alpha/beta 99.8 1.8E-17 4E-22 148.0 19.9 108 11-128 103-211 (402)
21 COG0412 Dienelactone hydrolase 99.8 6.5E-17 1.4E-21 133.8 20.9 207 1-247 15-235 (236)
22 COG1647 Esterase/lipase [Gener 99.8 3.9E-18 8.4E-23 134.5 12.6 159 14-200 16-223 (243)
23 PLN02824 hydrolase, alpha/beta 99.8 3.1E-17 6.6E-22 140.8 18.1 102 13-128 29-137 (294)
24 PRK00870 haloalkane dehalogena 99.8 6.4E-17 1.4E-21 139.5 19.8 102 12-126 45-148 (302)
25 PRK10162 acetyl esterase; Prov 99.8 1.7E-16 3.6E-21 137.7 20.6 184 1-200 70-290 (318)
26 TIGR02427 protocat_pcaD 3-oxoa 99.8 2.3E-17 4.9E-22 136.7 14.5 101 12-126 12-112 (251)
27 TIGR02240 PHA_depoly_arom poly 99.8 7.4E-17 1.6E-21 137.3 17.6 102 13-128 25-126 (276)
28 PRK10349 carboxylesterase BioH 99.7 5.5E-17 1.2E-21 136.4 15.5 96 13-127 13-108 (256)
29 PF00326 Peptidase_S9: Prolyl 99.7 3.3E-17 7.1E-22 134.2 12.6 174 29-248 3-212 (213)
30 PLN02442 S-formylglutathione h 99.7 1.3E-16 2.8E-21 136.2 16.5 186 1-200 33-262 (283)
31 TIGR03056 bchO_mg_che_rel puta 99.7 3.7E-16 7.9E-21 132.4 19.2 101 12-126 27-128 (278)
32 TIGR03611 RutD pyrimidine util 99.7 1.4E-16 3E-21 132.9 15.8 104 11-128 11-115 (257)
33 PRK03592 haloalkane dehalogena 99.7 2.4E-16 5.3E-21 135.3 17.6 102 11-126 25-126 (295)
34 TIGR03343 biphenyl_bphD 2-hydr 99.7 2.8E-16 6.1E-21 133.8 17.3 103 11-127 28-135 (282)
35 PRK10673 acyl-CoA esterase; Pr 99.7 4.9E-16 1.1E-20 130.3 18.2 104 7-125 10-113 (255)
36 TIGR02821 fghA_ester_D S-formy 99.7 2.1E-16 4.5E-21 134.5 15.9 185 2-200 29-256 (275)
37 TIGR03695 menH_SHCHC 2-succiny 99.7 2.1E-16 4.5E-21 130.6 15.4 102 14-128 2-105 (251)
38 PLN02965 Probable pheophorbida 99.7 3.3E-16 7.2E-21 131.7 16.4 100 15-127 5-106 (255)
39 PRK14875 acetoin dehydrogenase 99.7 5.5E-16 1.2E-20 137.2 17.1 109 5-127 123-231 (371)
40 PLN02679 hydrolase, alpha/beta 99.7 1.7E-15 3.8E-20 133.6 19.4 102 13-128 88-191 (360)
41 TIGR01840 esterase_phb esteras 99.7 1.7E-15 3.7E-20 123.9 16.4 113 2-128 1-130 (212)
42 PRK10985 putative hydrolase; P 99.7 1E-15 2.2E-20 133.3 15.9 103 11-127 56-167 (324)
43 TIGR01250 pro_imino_pep_2 prol 99.7 4E-15 8.7E-20 126.0 18.9 104 11-127 23-130 (288)
44 PF12697 Abhydrolase_6: Alpha/ 99.7 2.4E-16 5.2E-21 128.3 10.8 165 16-204 1-220 (228)
45 TIGR01738 bioH putative pimelo 99.7 1.1E-15 2.4E-20 126.2 14.7 95 14-127 5-99 (245)
46 KOG4409 Predicted hydrolase/ac 99.7 4.8E-16 1E-20 130.9 12.0 111 11-131 88-198 (365)
47 TIGR03100 hydr1_PEP hydrolase, 99.7 6E-15 1.3E-19 125.4 18.8 110 3-129 17-135 (274)
48 PRK11460 putative hydrolase; P 99.7 3.9E-15 8.5E-20 123.4 16.9 167 7-200 10-192 (232)
49 PLN02211 methyl indole-3-aceta 99.7 6.4E-15 1.4E-19 125.2 18.4 105 11-127 16-121 (273)
50 PLN02578 hydrolase 99.7 6.4E-15 1.4E-19 129.8 18.8 102 12-127 85-186 (354)
51 PLN02511 hydrolase 99.7 2.4E-15 5.1E-20 133.9 16.1 101 11-125 98-207 (388)
52 PRK03204 haloalkane dehalogena 99.7 5.1E-15 1.1E-19 126.7 17.1 103 11-127 32-135 (286)
53 TIGR01607 PST-A Plasmodium sub 99.7 4.7E-15 1E-19 129.4 16.4 189 5-203 15-315 (332)
54 PLN03087 BODYGUARD 1 domain co 99.7 8.4E-15 1.8E-19 132.3 18.4 109 7-127 195-308 (481)
55 PRK11126 2-succinyl-6-hydroxy- 99.7 9.6E-15 2.1E-19 121.5 17.4 100 13-127 2-101 (242)
56 KOG1552 Predicted alpha/beta h 99.7 5.9E-15 1.3E-19 119.8 15.2 165 12-202 59-235 (258)
57 PLN03084 alpha/beta hydrolase 99.6 4.2E-14 9.1E-19 125.1 18.7 110 5-128 119-232 (383)
58 PRK06489 hypothetical protein; 99.6 1.5E-14 3.3E-19 127.7 15.6 103 13-127 69-188 (360)
59 PF05448 AXE1: Acetyl xylan es 99.6 3.3E-15 7.2E-20 128.8 10.9 174 2-200 71-303 (320)
60 TIGR00976 /NonD putative hydro 99.6 5.9E-14 1.3E-18 130.5 19.4 111 2-127 11-131 (550)
61 TIGR03101 hydr2_PEP hydrolase, 99.6 1.2E-14 2.7E-19 122.0 13.2 109 4-129 16-135 (266)
62 KOG4178 Soluble epoxide hydrol 99.6 5.3E-14 1.1E-18 118.2 16.8 105 9-124 40-144 (322)
63 COG0657 Aes Esterase/lipase [L 99.6 2.1E-13 4.5E-18 118.2 16.8 181 1-200 65-287 (312)
64 PRK08775 homoserine O-acetyltr 99.6 8.5E-14 1.9E-18 122.2 14.2 101 12-127 57-172 (343)
65 PRK07581 hypothetical protein; 99.5 2.6E-13 5.6E-18 118.9 16.4 105 12-125 40-156 (339)
66 COG3458 Acetyl esterase (deace 99.5 4.3E-14 9.3E-19 114.9 9.8 176 3-203 72-303 (321)
67 PF06500 DUF1100: Alpha/beta h 99.5 1.5E-13 3.2E-18 120.1 13.4 177 1-202 178-395 (411)
68 PRK11071 esterase YqiA; Provis 99.5 4.1E-13 8.9E-18 107.8 14.9 147 14-200 2-173 (190)
69 PRK10115 protease 2; Provision 99.5 8.9E-13 1.9E-17 124.9 19.4 177 1-200 430-653 (686)
70 COG2945 Predicted hydrolase of 99.5 9.2E-13 2E-17 102.1 15.8 160 4-200 19-188 (210)
71 TIGR01836 PHA_synth_III_C poly 99.5 8.7E-13 1.9E-17 116.1 17.3 109 3-127 51-170 (350)
72 PF02230 Abhydrolase_2: Phosph 99.5 5.7E-13 1.2E-17 109.3 14.6 173 4-200 6-199 (216)
73 PLN02980 2-oxoglutarate decarb 99.5 4.4E-13 9.6E-18 137.4 16.6 102 12-127 1370-1479(1655)
74 TIGR01392 homoserO_Ac_trn homo 99.5 3.4E-13 7.5E-18 118.7 13.5 103 12-127 30-161 (351)
75 COG0429 Predicted hydrolase of 99.5 5.2E-12 1.1E-16 106.2 17.1 88 10-107 72-168 (345)
76 KOG1515 Arylacetamide deacetyl 99.5 4.6E-12 1E-16 109.1 17.0 126 1-130 75-209 (336)
77 KOG4391 Predicted alpha/beta h 99.5 4.1E-13 8.9E-18 105.8 9.6 172 9-202 74-265 (300)
78 KOG1454 Predicted hydrolase/ac 99.5 1.6E-12 3.6E-17 112.6 14.3 93 11-110 56-151 (326)
79 PRK00175 metX homoserine O-ace 99.5 1.4E-12 2.9E-17 116.0 14.1 102 13-127 48-181 (379)
80 PLN02872 triacylglycerol lipas 99.4 2.6E-13 5.7E-18 120.3 9.0 83 12-105 73-178 (395)
81 TIGR01249 pro_imino_pep_1 prol 99.4 1.8E-12 4E-17 112.0 14.0 100 13-126 27-128 (306)
82 PRK05855 short chain dehydroge 99.4 3.8E-12 8.3E-17 119.2 15.5 88 12-107 24-114 (582)
83 PF07859 Abhydrolase_3: alpha/ 99.4 1.5E-12 3.3E-17 106.2 10.7 168 16-200 1-208 (211)
84 PF12715 Abhydrolase_7: Abhydr 99.4 7.1E-13 1.5E-17 114.0 8.2 171 1-188 102-334 (390)
85 KOG4627 Kynurenine formamidase 99.4 9.6E-13 2.1E-17 102.8 6.4 179 2-205 58-252 (270)
86 KOG1838 Alpha/beta hydrolase [ 99.4 5E-11 1.1E-15 103.7 17.4 173 11-205 123-368 (409)
87 TIGR01838 PHA_synth_I poly(R)- 99.4 1.8E-11 4E-16 111.9 15.4 89 3-101 177-276 (532)
88 PF02129 Peptidase_S15: X-Pro 99.4 2.9E-11 6.3E-16 102.7 15.4 112 2-128 7-136 (272)
89 COG3571 Predicted hydrolase of 99.3 3.1E-10 6.7E-15 85.5 18.0 191 5-244 7-210 (213)
90 cd00707 Pancreat_lipase_like P 99.3 1E-11 2.2E-16 105.4 10.3 113 11-130 34-149 (275)
91 PF06821 Ser_hydrolase: Serine 99.3 3.8E-11 8.2E-16 94.4 12.3 149 16-202 1-155 (171)
92 COG0400 Predicted esterase [Ge 99.3 6.2E-11 1.3E-15 95.6 13.1 164 10-200 15-189 (207)
93 KOG3101 Esterase D [General fu 99.3 1E-11 2.3E-16 97.5 8.3 122 3-130 31-178 (283)
94 PF10503 Esterase_phd: Esteras 99.3 3.3E-10 7E-15 92.3 16.3 111 3-127 4-131 (220)
95 TIGR03230 lipo_lipase lipoprot 99.3 3.9E-11 8.5E-16 106.9 11.7 111 12-129 40-155 (442)
96 KOG3043 Predicted hydrolase re 99.3 1.4E-10 3.1E-15 92.1 13.5 183 13-247 40-242 (242)
97 PRK07868 acyl-CoA synthetase; 99.2 3.7E-10 8E-15 112.0 16.8 101 3-108 52-162 (994)
98 TIGR03502 lipase_Pla1_cef extr 99.2 1.6E-10 3.4E-15 109.2 13.2 97 12-108 448-576 (792)
99 COG3208 GrsT Predicted thioest 99.2 3.7E-10 8.1E-15 91.4 12.5 93 11-110 5-97 (244)
100 KOG2100 Dipeptidyl aminopeptid 99.2 6.1E-10 1.3E-14 106.3 16.0 176 4-200 514-726 (755)
101 PRK05371 x-prolyl-dipeptidyl a 99.2 8.9E-10 1.9E-14 105.5 16.2 91 31-127 270-372 (767)
102 PF08840 BAAT_C: BAAT / Acyl-C 99.2 3.1E-10 6.7E-15 92.7 11.0 165 60-247 3-212 (213)
103 KOG4667 Predicted esterase [Li 99.1 1.6E-09 3.5E-14 85.6 12.6 168 10-200 30-239 (269)
104 COG4099 Predicted peptidase [G 99.1 2.3E-10 4.9E-15 94.5 7.8 155 2-185 176-342 (387)
105 KOG2564 Predicted acetyltransf 99.1 6.8E-10 1.5E-14 91.1 10.1 111 10-129 71-183 (343)
106 KOG2281 Dipeptidyl aminopeptid 99.1 1.8E-09 3.9E-14 97.4 11.9 112 3-128 629-762 (867)
107 PF00756 Esterase: Putative es 99.0 1.5E-09 3.3E-14 90.9 8.2 121 2-128 10-150 (251)
108 PF08538 DUF1749: Protein of u 99.0 4.2E-09 9E-14 88.8 10.5 111 12-129 32-149 (303)
109 PF05728 UPF0227: Uncharacteri 99.0 2.5E-08 5.4E-13 79.4 14.5 148 16-204 2-174 (187)
110 PF12146 Hydrolase_4: Putative 99.0 2.2E-09 4.8E-14 73.1 7.3 67 3-70 7-74 (79)
111 PRK10439 enterobactin/ferric e 99.0 5.3E-09 1.1E-13 93.5 11.7 119 2-128 196-323 (411)
112 PF00561 Abhydrolase_1: alpha/ 99.0 4.9E-09 1.1E-13 85.9 10.3 71 41-127 1-78 (230)
113 COG3509 LpqC Poly(3-hydroxybut 99.0 8.5E-09 1.8E-13 85.6 11.0 101 2-110 49-167 (312)
114 COG2272 PnbA Carboxylesterase 98.9 3.2E-09 6.8E-14 94.1 8.8 101 2-107 82-200 (491)
115 KOG2382 Predicted alpha/beta h 98.9 3E-08 6.6E-13 83.8 14.2 95 6-110 45-147 (315)
116 PRK06765 homoserine O-acetyltr 98.9 3.9E-08 8.4E-13 87.5 13.6 101 11-124 54-192 (389)
117 PF00975 Thioesterase: Thioest 98.9 1.4E-08 3E-13 83.8 9.6 104 14-128 1-104 (229)
118 cd00312 Esterase_lipase Estera 98.9 1.2E-08 2.6E-13 94.0 10.0 100 2-108 81-197 (493)
119 PF06342 DUF1057: Alpha/beta h 98.8 4.6E-08 9.9E-13 81.1 11.4 104 11-128 33-137 (297)
120 PF00151 Lipase: Lipase; Inte 98.8 7E-09 1.5E-13 90.0 6.8 112 11-130 69-189 (331)
121 PF02273 Acyl_transf_2: Acyl t 98.8 2.8E-08 6E-13 80.3 9.2 166 7-200 22-237 (294)
122 PF00135 COesterase: Carboxyle 98.8 5E-08 1.1E-12 90.6 11.4 118 2-128 111-245 (535)
123 PF03959 FSH1: Serine hydrolas 98.8 1.8E-08 3.8E-13 82.4 7.3 165 12-200 3-201 (212)
124 PF07819 PGAP1: PGAP1-like pro 98.7 2E-07 4.3E-12 76.8 11.8 105 13-125 4-120 (225)
125 TIGR01839 PHA_synth_II poly(R) 98.7 3.9E-07 8.4E-12 83.2 14.2 101 3-109 204-314 (560)
126 KOG2112 Lysophospholipase [Lip 98.7 3.8E-07 8.2E-12 72.3 12.0 165 14-202 4-190 (206)
127 COG0596 MhpC Predicted hydrola 98.7 3.8E-07 8.3E-12 74.9 12.4 100 13-127 21-122 (282)
128 PF06057 VirJ: Bacterial virul 98.7 3.4E-07 7.3E-12 72.0 11.0 159 15-200 4-174 (192)
129 PF10230 DUF2305: Uncharacteri 98.7 3.2E-07 6.8E-12 77.6 11.3 114 13-130 2-124 (266)
130 KOG2984 Predicted hydrolase [G 98.6 9.3E-08 2E-12 75.1 6.2 85 15-110 44-137 (277)
131 COG3545 Predicted esterase of 98.6 2.1E-06 4.5E-11 66.3 12.9 150 14-201 3-157 (181)
132 KOG2624 Triglyceride lipase-ch 98.5 2.1E-07 4.4E-12 82.3 7.4 109 7-128 67-199 (403)
133 COG4757 Predicted alpha/beta h 98.4 1.2E-06 2.6E-11 70.4 8.0 83 15-107 32-125 (281)
134 PF03583 LIP: Secretory lipase 98.4 6.3E-06 1.4E-10 70.6 12.8 76 30-107 16-91 (290)
135 PF01674 Lipase_2: Lipase (cla 98.4 3.3E-07 7.3E-12 74.6 4.4 89 15-108 3-96 (219)
136 COG2936 Predicted acyl esteras 98.4 1.1E-06 2.4E-11 80.0 8.1 100 2-110 34-147 (563)
137 PF12048 DUF3530: Protein of u 98.3 3.3E-05 7E-10 66.7 15.9 148 3-160 76-256 (310)
138 TIGR01849 PHB_depoly_PhaZ poly 98.3 1.9E-05 4E-10 70.2 13.8 97 3-108 89-189 (406)
139 COG2819 Predicted hydrolase of 98.3 5.1E-06 1.1E-10 68.7 9.6 120 3-128 26-172 (264)
140 KOG2551 Phospholipase/carboxyh 98.3 3.6E-05 7.9E-10 61.7 13.4 163 12-200 4-202 (230)
141 COG4814 Uncharacterized protei 98.3 9.3E-05 2E-09 60.5 15.8 106 16-125 48-173 (288)
142 PLN02733 phosphatidylcholine-s 98.3 4.9E-06 1.1E-10 74.9 9.5 94 25-126 106-199 (440)
143 COG0627 Predicted esterase [Ge 98.3 2E-06 4.2E-11 74.0 6.2 116 10-131 51-190 (316)
144 PF05057 DUF676: Putative seri 98.2 9.1E-06 2E-10 66.6 8.7 94 12-107 3-98 (217)
145 PRK04940 hypothetical protein; 98.2 4.2E-05 9.1E-10 60.1 11.9 90 16-130 2-94 (180)
146 PF05990 DUF900: Alpha/beta hy 98.1 2.5E-05 5.5E-10 64.7 10.6 141 11-160 16-163 (233)
147 COG3319 Thioesterase domains o 98.1 1.4E-05 3.1E-10 66.6 8.6 104 14-129 1-104 (257)
148 PF06028 DUF915: Alpha/beta hy 98.1 1.9E-05 4.1E-10 66.0 8.0 115 12-130 10-146 (255)
149 PRK10252 entF enterobactin syn 98.0 2.3E-05 5E-10 80.4 10.2 104 12-127 1067-1170(1296)
150 PF10340 DUF2424: Protein of u 98.0 0.00011 2.4E-09 64.3 11.8 119 3-131 109-238 (374)
151 KOG1516 Carboxylesterase and r 98.0 2.8E-05 6.1E-10 72.6 8.8 99 3-106 100-214 (545)
152 PF05677 DUF818: Chlamydia CHL 98.0 5.1E-05 1.1E-09 64.8 9.4 95 11-108 135-236 (365)
153 COG1505 Serine proteases of th 98.0 9.7E-05 2.1E-09 67.3 11.3 176 1-200 408-624 (648)
154 PF09752 DUF2048: Uncharacteri 97.9 9.2E-05 2E-09 63.8 10.3 96 4-110 81-198 (348)
155 COG1073 Hydrolases of the alph 97.9 9.5E-05 2.1E-09 62.7 10.6 46 3-48 36-84 (299)
156 KOG3253 Predicted alpha/beta h 97.9 0.00077 1.7E-08 61.5 15.3 202 12-249 175-382 (784)
157 PF10142 PhoPQ_related: PhoPQ- 97.9 0.0021 4.5E-08 56.5 17.4 200 2-250 52-325 (367)
158 COG1770 PtrB Protease II [Amin 97.8 0.00056 1.2E-08 63.2 13.3 115 1-129 433-563 (682)
159 COG3243 PhaC Poly(3-hydroxyalk 97.8 0.00029 6.3E-09 61.8 11.1 101 3-110 96-204 (445)
160 COG2382 Fes Enterochelin ester 97.8 0.00024 5.2E-09 59.8 10.1 118 3-128 85-212 (299)
161 COG2021 MET2 Homoserine acetyl 97.8 4.1E-05 8.9E-10 66.1 5.1 96 11-110 49-170 (368)
162 PTZ00472 serine carboxypeptida 97.7 0.00023 5E-09 64.9 9.6 121 9-130 73-218 (462)
163 COG1075 LipA Predicted acetylt 97.7 0.00013 2.8E-09 63.8 7.6 99 15-126 61-162 (336)
164 PF03096 Ndr: Ndr family; Int 97.6 0.0014 3.1E-08 55.2 12.5 108 11-128 21-134 (283)
165 COG3946 VirJ Type IV secretory 97.6 0.0016 3.4E-08 57.0 12.6 85 12-106 259-345 (456)
166 PF07082 DUF1350: Protein of u 97.6 0.0014 3.1E-08 53.9 11.4 99 3-109 9-112 (250)
167 KOG1553 Predicted alpha/beta h 97.5 0.00029 6.2E-09 60.1 7.2 103 12-128 242-345 (517)
168 KOG3975 Uncharacterized conser 97.3 0.0044 9.6E-08 50.8 10.7 109 11-128 27-147 (301)
169 COG4782 Uncharacterized protei 97.2 0.0026 5.7E-08 54.9 9.0 108 12-129 115-235 (377)
170 KOG3724 Negative regulator of 97.1 0.003 6.4E-08 59.6 8.7 92 14-106 90-201 (973)
171 PF11144 DUF2920: Protein of u 97.0 0.011 2.3E-07 52.3 11.4 46 6-51 28-76 (403)
172 smart00824 PKS_TE Thioesterase 97.0 0.0066 1.4E-07 48.5 9.6 91 24-126 10-100 (212)
173 KOG2237 Predicted serine prote 97.0 0.00087 1.9E-08 61.6 4.4 116 1-130 455-586 (712)
174 COG3150 Predicted esterase [Ge 96.9 0.005 1.1E-07 47.4 7.4 78 16-109 2-81 (191)
175 PF05577 Peptidase_S28: Serine 96.9 0.0053 1.1E-07 55.8 8.9 105 12-125 28-145 (434)
176 PF02450 LCAT: Lecithin:choles 96.8 0.0036 7.8E-08 56.0 6.8 88 28-127 66-159 (389)
177 PF00450 Peptidase_S10: Serine 96.8 0.0027 5.9E-08 57.1 5.8 120 10-130 37-183 (415)
178 KOG4840 Predicted hydrolases o 96.5 0.017 3.7E-07 46.6 8.2 104 13-130 36-146 (299)
179 PLN02606 palmitoyl-protein thi 96.5 0.039 8.5E-07 47.0 10.4 101 12-125 26-129 (306)
180 KOG2541 Palmitoyl protein thio 96.4 0.053 1.1E-06 45.1 10.3 96 15-125 25-125 (296)
181 PF11339 DUF3141: Protein of u 96.4 0.22 4.9E-06 45.4 14.9 93 9-110 65-163 (581)
182 KOG4388 Hormone-sensitive lipa 96.1 0.017 3.7E-07 52.9 6.8 97 5-106 388-488 (880)
183 KOG2931 Differentiation-relate 96.1 0.1 2.2E-06 44.1 10.8 104 11-128 44-157 (326)
184 KOG3967 Uncharacterized conser 96.1 0.04 8.6E-07 44.3 8.1 103 11-127 99-226 (297)
185 PF01764 Lipase_3: Lipase (cla 96.1 0.0077 1.7E-07 45.4 3.9 23 86-108 63-85 (140)
186 PLN02633 palmitoyl protein thi 96.1 0.081 1.8E-06 45.2 10.2 101 12-125 25-128 (314)
187 PF02089 Palm_thioest: Palmito 96.0 0.035 7.7E-07 46.8 7.6 103 14-126 6-114 (279)
188 cd00741 Lipase Lipase. Lipase 95.8 0.018 3.9E-07 44.3 4.7 42 85-128 26-67 (153)
189 KOG2369 Lecithin:cholesterol a 95.5 0.033 7.1E-07 49.9 6.0 75 28-110 125-205 (473)
190 PF11187 DUF2974: Protein of u 95.4 0.049 1.1E-06 44.8 6.2 37 88-126 85-121 (224)
191 PLN02517 phosphatidylcholine-s 95.3 0.02 4.4E-07 52.9 4.1 73 28-106 157-232 (642)
192 KOG4389 Acetylcholinesterase/B 95.1 0.048 1.1E-06 49.1 5.8 100 3-107 124-238 (601)
193 cd00519 Lipase_3 Lipase (class 95.1 0.1 2.2E-06 42.9 7.6 24 85-108 126-149 (229)
194 KOG2565 Predicted hydrolases o 94.8 0.11 2.4E-06 45.3 6.8 88 13-110 152-252 (469)
195 PLN03016 sinapoylglucose-malat 94.7 0.12 2.5E-06 47.0 7.2 119 10-130 63-212 (433)
196 PLN02209 serine carboxypeptida 94.4 0.17 3.8E-06 45.9 7.6 116 10-130 65-214 (437)
197 PLN02454 triacylglycerol lipas 94.4 0.052 1.1E-06 48.4 4.1 20 88-107 229-248 (414)
198 PF06259 Abhydrolase_8: Alpha/ 94.3 1.1 2.4E-05 35.4 10.9 23 85-107 107-129 (177)
199 PF01083 Cutinase: Cutinase; 94.2 0.16 3.4E-06 40.2 6.1 40 86-125 80-119 (179)
200 PLN02324 triacylglycerol lipas 93.8 0.067 1.4E-06 47.7 3.6 20 88-107 216-235 (415)
201 PLN02310 triacylglycerol lipas 93.8 0.066 1.4E-06 47.6 3.5 21 87-107 209-229 (405)
202 PLN02571 triacylglycerol lipas 93.7 0.077 1.7E-06 47.3 3.8 20 88-107 227-246 (413)
203 PLN02408 phospholipase A1 93.6 0.08 1.7E-06 46.5 3.7 22 88-109 201-222 (365)
204 PF08237 PE-PPE: PE-PPE domain 93.5 0.56 1.2E-05 38.6 8.4 82 40-126 2-88 (225)
205 PF08386 Abhydrolase_4: TAP-li 93.1 0.16 3.6E-06 36.2 4.1 44 149-202 33-76 (103)
206 PLN02162 triacylglycerol lipas 92.7 0.13 2.7E-06 46.5 3.7 21 86-106 277-297 (475)
207 PLN00413 triacylglycerol lipas 92.6 0.098 2.1E-06 47.3 2.8 21 86-106 283-303 (479)
208 PLN03037 lipase class 3 family 92.5 0.13 2.8E-06 47.0 3.6 21 87-107 318-338 (525)
209 PLN02802 triacylglycerol lipas 92.2 0.14 3.1E-06 46.6 3.4 22 87-108 330-351 (509)
210 PLN02761 lipase class 3 family 92.2 0.15 3.4E-06 46.6 3.6 21 87-107 294-314 (527)
211 PLN02719 triacylglycerol lipas 92.2 0.15 3.3E-06 46.5 3.6 22 87-108 298-319 (518)
212 KOG4372 Predicted alpha/beta h 92.1 0.19 4.1E-06 44.4 3.9 87 12-106 79-169 (405)
213 PLN02934 triacylglycerol lipas 92.0 0.14 3.1E-06 46.7 3.2 22 86-107 320-341 (515)
214 KOG2183 Prolylcarboxypeptidase 92.0 0.51 1.1E-05 41.9 6.4 89 14-110 81-190 (492)
215 PLN02753 triacylglycerol lipas 90.9 0.17 3.7E-06 46.3 2.5 21 87-107 312-332 (531)
216 PF11288 DUF3089: Protein of u 90.6 0.59 1.3E-05 37.8 5.1 23 86-108 94-116 (207)
217 PLN02847 triacylglycerol lipas 90.5 0.19 4.1E-06 46.7 2.4 21 87-107 251-271 (633)
218 PF07519 Tannase: Tannase and 89.8 0.77 1.7E-05 42.3 5.8 88 34-128 53-150 (474)
219 COG4947 Uncharacterized protei 89.1 2.3 4.9E-05 33.3 7.0 37 87-129 101-137 (227)
220 KOG4569 Predicted lipase [Lipi 87.8 0.38 8.2E-06 42.2 2.3 23 86-108 170-192 (336)
221 COG4287 PqaA PhoPQ-activated p 87.4 20 0.00043 31.8 12.2 102 83-200 230-370 (507)
222 PF04083 Abhydro_lipase: Parti 86.2 0.78 1.7E-05 29.5 2.5 21 9-29 39-59 (63)
223 KOG2182 Hydrolytic enzymes of 85.4 8.6 0.00019 35.2 9.5 101 10-110 83-195 (514)
224 PF04301 DUF452: Protein of un 85.0 3.8 8.2E-05 33.4 6.6 65 14-107 12-77 (213)
225 COG2939 Carboxypeptidase C (ca 83.7 2.2 4.7E-05 39.0 5.0 95 8-108 96-219 (498)
226 KOG4540 Putative lipase essent 83.5 1.3 2.8E-05 37.5 3.3 25 85-109 274-298 (425)
227 COG5153 CVT17 Putative lipase 83.5 1.3 2.8E-05 37.5 3.3 25 85-109 274-298 (425)
228 KOG1551 Uncharacterized conser 82.5 3.2 7E-05 34.8 5.2 100 11-110 111-218 (371)
229 PF06309 Torsin: Torsin; Inte 80.8 7.9 0.00017 28.7 6.3 31 10-40 49-81 (127)
230 COG0596 MhpC Predicted hydrola 80.7 2.7 5.9E-05 33.6 4.4 50 147-205 218-267 (282)
231 KOG1282 Serine carboxypeptidas 80.5 7.3 0.00016 35.6 7.3 47 84-130 165-215 (454)
232 PF03283 PAE: Pectinacetyleste 80.4 11 0.00023 33.6 8.1 38 62-107 139-176 (361)
233 COG0529 CysC Adenylylsulfate k 79.4 4.9 0.00011 31.7 5.0 38 11-48 20-59 (197)
234 PLN02213 sinapoylglucose-malat 79.0 8.9 0.00019 33.3 7.2 88 42-130 3-98 (319)
235 KOG1283 Serine carboxypeptidas 73.6 17 0.00037 31.5 7.1 125 4-130 20-168 (414)
236 PF06850 PHB_depo_C: PHB de-po 72.8 4.4 9.5E-05 32.4 3.2 47 150-204 134-183 (202)
237 TIGR03712 acc_sec_asp2 accesso 72.1 29 0.00064 31.9 8.6 103 11-128 287-390 (511)
238 PF05705 DUF829: Eukaryotic pr 71.7 21 0.00045 29.4 7.3 85 14-106 1-86 (240)
239 PF05576 Peptidase_S37: PS-10 68.4 2.8 6.1E-05 37.5 1.4 97 11-123 61-164 (448)
240 KOG2029 Uncharacterized conser 67.1 10 0.00023 35.5 4.8 24 84-107 523-546 (697)
241 PF01583 APS_kinase: Adenylyls 63.3 16 0.00034 28.2 4.5 36 13-48 1-38 (156)
242 PF13207 AAA_17: AAA domain; P 60.4 11 0.00024 27.1 3.1 31 16-48 1-32 (121)
243 KOG2585 Uncharacterized conser 57.1 21 0.00046 32.2 4.7 39 9-47 262-300 (453)
244 PF06792 UPF0261: Uncharacteri 55.2 1.4E+02 0.0031 26.9 9.6 96 15-110 3-118 (403)
245 PRK02399 hypothetical protein; 54.7 93 0.002 28.1 8.3 92 19-110 8-120 (406)
246 TIGR03709 PPK2_rel_1 polyphosp 51.2 21 0.00044 30.2 3.6 37 11-47 53-91 (264)
247 PF10081 Abhydrolase_9: Alpha/ 50.3 1.3E+02 0.0027 25.8 8.0 83 20-106 41-128 (289)
248 PF05277 DUF726: Protein of un 49.3 28 0.00061 30.7 4.3 26 85-110 218-243 (345)
249 KOG3349 Predicted glycosyltran 49.2 29 0.00063 26.6 3.8 32 14-45 81-132 (170)
250 COG0431 Predicted flavoprotein 49.2 74 0.0016 25.1 6.4 64 28-107 57-121 (184)
251 COG0505 CarA Carbamoylphosphat 48.3 69 0.0015 28.3 6.4 68 30-108 191-270 (368)
252 PF01656 CbiA: CobQ/CobB/MinD/ 48.0 30 0.00066 27.0 4.1 32 18-49 3-36 (195)
253 PF14253 AbiH: Bacteriophage a 46.8 11 0.00025 31.5 1.5 15 85-99 233-247 (270)
254 PRK11253 ldcA L,D-carboxypepti 46.0 75 0.0016 27.5 6.4 36 15-50 4-40 (305)
255 PF00326 Peptidase_S9: Prolyl 45.7 69 0.0015 25.5 5.9 64 12-75 143-211 (213)
256 KOG2872 Uroporphyrinogen decar 43.9 28 0.0006 29.7 3.3 30 12-48 251-280 (359)
257 PF14359 DUF4406: Domain of un 43.6 1.1E+02 0.0023 21.2 5.8 69 26-109 15-86 (92)
258 PF13728 TraF: F plasmid trans 43.1 68 0.0015 26.1 5.4 45 11-55 120-165 (215)
259 PF03853 YjeF_N: YjeF-related 42.6 31 0.00066 26.9 3.2 35 12-46 24-58 (169)
260 COG3101 Uncharacterized protei 42.5 24 0.00053 26.5 2.4 23 4-26 32-55 (180)
261 PF05724 TPMT: Thiopurine S-me 42.0 37 0.0008 27.8 3.7 30 14-48 38-67 (218)
262 cd01523 RHOD_Lact_B Member of 41.4 65 0.0014 22.1 4.5 32 11-46 60-91 (100)
263 COG3673 Uncharacterized conser 41.3 2.5E+02 0.0054 24.7 9.9 94 11-107 29-142 (423)
264 PF10605 3HBOH: 3HB-oligomer h 40.5 43 0.00094 31.7 4.2 48 148-202 552-605 (690)
265 TIGR00632 vsr DNA mismatch end 40.5 75 0.0016 23.2 4.7 14 33-46 100-113 (117)
266 PF08257 Sulfakinin: Sulfakini 39.9 15 0.00032 13.7 0.5 7 195-201 2-8 (9)
267 TIGR02069 cyanophycinase cyano 39.8 2.2E+02 0.0047 23.8 8.1 39 10-48 25-65 (250)
268 cd01714 ETF_beta The electron 39.1 1.2E+02 0.0025 24.5 6.2 23 88-110 110-136 (202)
269 TIGR03707 PPK2_P_aer polyphosp 39.1 38 0.00082 28.0 3.4 37 12-48 29-67 (230)
270 KOG2170 ATPase of the AAA+ sup 38.2 43 0.00093 29.0 3.5 32 11-42 107-140 (344)
271 TIGR00128 fabD malonyl CoA-acy 38.1 26 0.00056 29.6 2.4 24 86-109 82-105 (290)
272 PF00698 Acyl_transf_1: Acyl t 38.0 21 0.00046 30.8 1.9 24 86-109 83-106 (318)
273 PF09994 DUF2235: Uncharacteri 37.8 29 0.00062 29.5 2.6 24 85-108 90-113 (277)
274 smart00827 PKS_AT Acyl transfe 37.8 29 0.00063 29.5 2.7 23 86-108 81-103 (298)
275 cd03818 GT1_ExpC_like This fam 37.8 53 0.0012 29.1 4.5 33 16-50 2-34 (396)
276 COG0331 FabD (acyl-carrier-pro 36.3 25 0.00055 30.4 2.0 23 85-107 83-105 (310)
277 COG0552 FtsY Signal recognitio 36.1 3E+02 0.0066 24.2 9.0 124 17-160 197-322 (340)
278 COG1255 Uncharacterized protei 35.3 41 0.00089 24.5 2.6 23 28-50 24-46 (129)
279 TIGR03131 malonate_mdcH malona 34.8 34 0.00074 29.1 2.6 24 86-109 75-98 (295)
280 PRK13256 thiopurine S-methyltr 34.6 48 0.001 27.3 3.3 28 16-48 46-73 (226)
281 PRK05579 bifunctional phosphop 34.2 3.2E+02 0.0069 24.7 8.7 37 12-48 116-154 (399)
282 TIGR01361 DAHP_synth_Bsub phos 34.0 2.2E+02 0.0047 24.0 7.3 39 13-51 132-170 (260)
283 COG2021 MET2 Homoserine acetyl 34.0 63 0.0014 28.6 4.0 50 147-204 303-352 (368)
284 PRK10964 ADP-heptose:LPS hepto 33.9 70 0.0015 27.6 4.4 34 12-45 177-215 (322)
285 cd01983 Fer4_NifH The Fer4_Nif 33.7 84 0.0018 20.7 4.1 22 26-47 13-34 (99)
286 KOG1752 Glutaredoxin and relat 33.3 1.8E+02 0.0039 20.7 6.6 80 12-110 13-92 (104)
287 COG3340 PepE Peptidase E [Amin 33.3 1.7E+02 0.0038 23.9 6.1 39 11-49 30-71 (224)
288 CHL00175 minD septum-site dete 33.2 1.1E+02 0.0023 25.8 5.4 37 12-48 14-52 (281)
289 COG3727 Vsr DNA G:T-mismatch r 33.1 85 0.0019 23.4 4.0 35 12-46 56-114 (150)
290 TIGR00521 coaBC_dfp phosphopan 33.1 2.5E+02 0.0054 25.3 7.8 78 13-94 113-193 (390)
291 KOG1202 Animal-type fatty acid 32.4 1.1E+02 0.0023 32.1 5.7 83 11-108 2121-2203(2376)
292 PF10686 DUF2493: Protein of u 31.7 78 0.0017 20.7 3.3 8 14-21 32-39 (71)
293 PHA02114 hypothetical protein 31.7 75 0.0016 22.3 3.3 36 12-47 81-116 (127)
294 TIGR03018 pepcterm_TyrKin exop 31.6 1.4E+02 0.0031 23.8 5.7 38 11-48 33-73 (207)
295 cd02036 MinD Bacterial cell di 31.4 73 0.0016 24.3 3.8 30 20-49 8-37 (179)
296 PF01075 Glyco_transf_9: Glyco 31.3 53 0.0012 26.9 3.2 36 12-47 104-144 (247)
297 PF03976 PPK2: Polyphosphate k 31.2 30 0.00065 28.5 1.6 37 12-48 29-67 (228)
298 TIGR00176 mobB molybdopterin-g 31.0 93 0.002 23.8 4.2 35 17-51 2-38 (155)
299 PRK14731 coaE dephospho-CoA ki 31.0 95 0.0021 25.0 4.5 36 11-48 2-37 (208)
300 PRK13869 plasmid-partitioning 30.8 1.1E+02 0.0023 27.7 5.2 38 13-50 121-160 (405)
301 PRK13703 conjugal pilus assemb 30.4 1.6E+02 0.0036 24.6 5.8 45 11-55 143-188 (248)
302 cd07213 Pat17_PNPLA8_PNPLA9_li 30.2 1.6E+02 0.0034 25.1 5.9 19 90-108 37-55 (288)
303 PRK03094 hypothetical protein; 30.0 58 0.0012 22.0 2.5 22 27-48 8-29 (80)
304 cd01521 RHOD_PspE2 Member of t 30.0 1.6E+02 0.0035 20.6 5.1 35 11-47 63-97 (110)
305 COG0859 RfaF ADP-heptose:LPS h 29.3 99 0.0021 27.0 4.6 35 13-47 175-215 (334)
306 PLN02752 [acyl-carrier protein 29.3 38 0.00081 29.7 2.0 19 90-108 127-145 (343)
307 TIGR02193 heptsyl_trn_I lipopo 29.3 94 0.002 26.6 4.5 35 12-46 178-217 (319)
308 COG1506 DAP2 Dipeptidyl aminop 29.3 1.9E+02 0.0041 27.8 6.8 62 13-74 551-617 (620)
309 TIGR03371 cellulose_yhjQ cellu 29.1 1E+02 0.0022 25.2 4.5 36 15-50 3-40 (246)
310 PF14246 TetR_C_7: AefR-like t 29.1 42 0.00092 20.2 1.7 21 225-245 35-55 (55)
311 TIGR01007 eps_fam capsular exo 28.5 1.5E+02 0.0032 23.5 5.2 36 13-48 17-54 (204)
312 cd01518 RHOD_YceA Member of th 28.0 71 0.0015 22.0 2.9 33 11-47 60-93 (101)
313 PF13439 Glyco_transf_4: Glyco 27.9 34 0.00074 25.7 1.4 32 18-49 7-38 (177)
314 COG4822 CbiK Cobalamin biosynt 27.6 1.3E+02 0.0028 24.6 4.5 36 10-45 135-172 (265)
315 TIGR03586 PseI pseudaminic aci 27.4 4.3E+02 0.0092 23.2 8.2 78 15-107 136-214 (327)
316 PF03033 Glyco_transf_28: Glyc 27.0 48 0.001 24.2 2.0 36 15-50 1-36 (139)
317 TIGR01969 minD_arch cell divis 26.9 85 0.0018 25.6 3.7 35 15-49 2-38 (251)
318 TIGR03569 NeuB_NnaB N-acetylne 26.8 3.4E+02 0.0075 23.8 7.4 79 15-108 135-216 (329)
319 TIGR02739 TraF type-F conjugat 26.7 1.7E+02 0.0036 24.7 5.3 45 11-55 150-195 (256)
320 cd01532 4RHOD_Repeat_1 Member 26.4 1.7E+02 0.0038 19.6 4.6 33 12-46 50-83 (92)
321 cd07225 Pat_PNPLA6_PNPLA7 Pata 26.3 3.3E+02 0.0071 23.5 7.2 63 27-108 2-64 (306)
322 PRK03846 adenylylsulfate kinas 26.3 1.3E+02 0.0029 23.7 4.6 36 12-47 22-59 (198)
323 COG2185 Sbm Methylmalonyl-CoA 26.0 3E+02 0.0065 20.9 9.0 73 12-106 12-84 (143)
324 cd02037 MRP-like MRP (Multiple 25.7 78 0.0017 24.3 3.0 34 16-49 2-37 (169)
325 PRK00889 adenylylsulfate kinas 25.7 1.7E+02 0.0037 22.5 5.0 35 14-48 4-40 (175)
326 cd02022 DPCK Dephospho-coenzym 24.9 87 0.0019 24.4 3.2 32 16-49 1-32 (179)
327 TIGR02113 coaC_strep phosphopa 24.9 2.2E+02 0.0047 22.4 5.4 37 12-48 112-150 (177)
328 COG0400 Predicted esterase [Ge 24.9 3.6E+02 0.0078 21.8 6.8 57 11-72 144-204 (207)
329 KOG2521 Uncharacterized conser 24.8 4.4E+02 0.0095 23.4 7.7 86 12-105 38-127 (350)
330 cd03816 GT1_ALG1_like This fam 24.7 1.7E+02 0.0038 26.2 5.5 39 12-50 3-41 (415)
331 TIGR03029 EpsG chain length de 24.7 1.9E+02 0.0041 24.2 5.4 38 11-48 101-140 (274)
332 PF03698 UPF0180: Uncharacteri 24.7 76 0.0016 21.4 2.4 21 28-48 9-29 (80)
333 TIGR01019 sucCoAalpha succinyl 24.4 4.5E+02 0.0098 22.5 8.6 90 11-125 87-177 (286)
334 TIGR01968 minD_bact septum sit 24.1 1.6E+02 0.0035 24.1 4.9 35 15-49 3-39 (261)
335 PRK06696 uridine kinase; Valid 24.1 1.6E+02 0.0036 23.8 4.8 36 11-46 19-56 (223)
336 TIGR03708 poly_P_AMP_trns poly 24.0 1.3E+02 0.0028 28.1 4.4 40 11-50 37-78 (493)
337 PRK06091 membrane protein FdrA 23.7 6.4E+02 0.014 24.0 8.9 88 9-124 139-226 (555)
338 PHA02519 plasmid partition pro 23.6 68 0.0015 28.8 2.6 39 13-51 106-147 (387)
339 PF08250 Sperm_act_pep: Sperm- 23.5 18 0.00039 14.1 -0.5 6 93-98 1-6 (10)
340 PLN02200 adenylate kinase fami 23.5 1.6E+02 0.0035 24.2 4.6 34 11-46 40-74 (234)
341 CHL00197 carA carbamoyl-phosph 23.5 3.8E+02 0.0082 24.1 7.2 78 13-107 193-282 (382)
342 PRK06762 hypothetical protein; 23.3 1E+02 0.0022 23.4 3.3 33 14-48 2-37 (166)
343 cd02033 BchX Chlorophyllide re 23.3 1.5E+02 0.0031 26.1 4.5 35 13-48 31-67 (329)
344 PLN03050 pyridoxine (pyridoxam 23.3 1.6E+02 0.0034 24.7 4.5 33 15-47 62-94 (246)
345 cd03823 GT1_ExpE7_like This fa 23.0 1.1E+02 0.0024 25.9 3.8 35 15-49 2-41 (359)
346 cd02040 NifH NifH gene encodes 22.9 1.2E+02 0.0025 25.2 3.8 34 16-50 4-39 (270)
347 cd03805 GT1_ALG2_like This fam 22.8 1.1E+02 0.0024 26.7 3.9 27 22-48 12-38 (392)
348 COG2820 Udp Uridine phosphoryl 22.6 1.7E+02 0.0037 24.3 4.4 32 12-45 57-88 (248)
349 cd07025 Peptidase_S66 LD-Carbo 22.5 3.8E+02 0.0082 22.7 6.9 34 17-50 3-37 (282)
350 PRK14734 coaE dephospho-CoA ki 22.3 1.4E+02 0.0031 23.8 4.0 31 16-48 3-33 (200)
351 PF13614 AAA_31: AAA domain; P 22.1 1.3E+02 0.0028 22.4 3.7 35 16-50 4-39 (157)
352 PF03205 MobB: Molybdopterin g 22.1 3E+02 0.0065 20.5 5.5 37 16-52 2-40 (140)
353 cd01534 4RHOD_Repeat_3 Member 22.0 1.9E+02 0.0041 19.5 4.2 32 12-47 56-87 (95)
354 PRK07313 phosphopantothenoylcy 21.9 2.8E+02 0.006 21.9 5.5 59 12-71 113-175 (182)
355 TIGR02816 pfaB_fam PfaB family 21.9 64 0.0014 30.4 2.1 25 85-109 263-287 (538)
356 PRK00726 murG undecaprenyldiph 21.7 1.1E+02 0.0025 26.5 3.7 34 15-48 4-37 (357)
357 TIGR03840 TMPT_Se_Te thiopurin 21.6 72 0.0016 25.9 2.2 17 32-48 48-64 (213)
358 TIGR02016 BchX chlorophyllide 21.6 1.8E+02 0.004 24.9 4.8 33 15-48 2-36 (296)
359 cd03784 GT1_Gtf_like This fami 21.4 1.5E+02 0.0032 26.2 4.4 35 15-49 3-37 (401)
360 cd01423 MGS_CPS_I_III Methylgl 21.4 1.7E+02 0.0037 20.9 3.9 22 25-46 11-32 (116)
361 COG1611 Predicted Rossmann fol 21.4 2.1E+02 0.0046 23.1 4.8 35 11-45 13-52 (205)
362 cd01525 RHOD_Kc Member of the 21.2 2.1E+02 0.0046 19.5 4.4 32 12-47 65-97 (105)
363 PRK10422 lipopolysaccharide co 20.9 1.8E+02 0.004 25.4 4.8 34 13-46 183-221 (352)
364 KOG1202 Animal-type fatty acid 20.9 1.6E+02 0.0034 31.0 4.5 17 84-100 579-595 (2376)
365 PRK13255 thiopurine S-methyltr 20.8 78 0.0017 25.8 2.2 17 32-48 51-67 (218)
366 cd02032 Bchl_like This family 20.8 1.3E+02 0.0028 25.1 3.6 33 16-49 3-37 (267)
367 PRK12467 peptide synthase; Pro 20.6 3.2E+02 0.0069 32.9 7.6 85 12-107 3691-3777(3956)
368 PRK00081 coaE dephospho-CoA ki 20.6 1.8E+02 0.004 23.0 4.3 32 15-48 3-34 (194)
369 PRK05569 flavodoxin; Provision 20.3 2.8E+02 0.006 20.3 5.1 34 12-45 83-116 (141)
370 PRK13705 plasmid-partitioning 20.3 2.2E+02 0.0048 25.5 5.2 40 12-51 105-147 (388)
371 PRK00131 aroK shikimate kinase 20.2 1.2E+02 0.0027 22.9 3.2 33 14-48 4-37 (175)
372 COG3911 Predicted ATPase [Gene 20.2 1.7E+02 0.0036 22.7 3.6 29 16-46 11-39 (183)
373 PRK01184 hypothetical protein; 20.0 1.5E+02 0.0033 22.9 3.7 30 15-46 2-31 (184)
No 1
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=100.00 E-value=6.4e-47 Score=302.84 Aligned_cols=268 Identities=56% Similarity=0.963 Sum_probs=241.3
Q ss_pred CcEEEecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCc
Q 043492 1 PLFIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 1 p~~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 80 (278)
|+.|+.|..++.+|+|+|.||+.-..+.|+.+.++++||||+|++++......++...++++..++++||.+.++..++.
T Consensus 34 pLlI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~ 113 (307)
T PF07224_consen 34 PLLIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPE 113 (307)
T ss_pred CeEEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCC
Confidence 68899999999999999999999999999999999999999999999987777777888899999999999999999998
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCcccc--CccCCCCCeEEEec
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDY--ESFNFSIPVTVIGT 158 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~P~Lii~g 158 (278)
.-..+.++++++|||.||.+|..+|..+. ..++++++|.+||+.+.... .+..|++++| .+.++++|+++|++
T Consensus 114 ~V~~nl~klal~GHSrGGktAFAlALg~a----~~lkfsaLIGiDPV~G~~k~-~~t~P~iLty~p~SF~l~iPv~VIGt 188 (307)
T PF07224_consen 114 NVEANLSKLALSGHSRGGKTAFALALGYA----TSLKFSALIGIDPVAGTSKG-KQTPPPILTYVPQSFDLDIPVLVIGT 188 (307)
T ss_pred CcccccceEEEeecCCccHHHHHHHhccc----ccCchhheecccccCCCCCC-CCCCCCeeecCCcccccCCceEEEec
Confidence 88889999999999999999999999775 23589999999999999776 6888999998 44578899999998
Q ss_pred CCCCCcC-CCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHH
Q 043492 159 GLGGLAK-CVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGI 237 (278)
Q Consensus 159 ~~~~~~~-~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (278)
..+...+ ...+|+|...++.++|++++.+. +.++..++||++|+|+....+++.. ..++|++|.-+|+.+|+.+.++
T Consensus 189 GLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~-~hfV~~dYGHmDmLDD~~~g~~G~~-~~clCkng~~pr~pMRr~vgGi 266 (307)
T PF07224_consen 189 GLGPKRNPLFPPCAPDGVNHEEFFNECKPPC-AHFVAKDYGHMDMLDDDTPGIIGKL-SYCLCKNGKSPRDPMRRFVGGI 266 (307)
T ss_pred CcCccccCCCCCCCCCCcCHHHHHHhhcccc-eeeeecccccccccccCccccccce-eeEeecCCCCcchHHHHhhhhh
Confidence 8872222 67899999999999999999998 9999999999999999988888885 7899999988899999999999
Q ss_pred HHHHHHHHhcCChhhHHHHhhCCCCCCeeeccccccCCC
Q 043492 238 AVAFLKAYFDSEGDDFKTILADPSVAPITLGQVEFIPAP 276 (278)
Q Consensus 238 ~~afl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (278)
++|||++||.|+.+++.++..+|.++|.+|+ .|+.-+|
T Consensus 267 vVAFL~a~l~~~~~d~~~I~~~p~~aP~~L~-~e~~~~~ 304 (307)
T PF07224_consen 267 VVAFLKAYLEGDDEDFMAIVKDPSLAPVKLD-PEQMDAN 304 (307)
T ss_pred HHHHHHHHHcCCHHHHHHHHhCCCCCCeecC-HhhccCc
Confidence 9999999999999999999999999999994 4444443
No 2
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=100.00 E-value=5.5e-43 Score=286.59 Aligned_cols=250 Identities=48% Similarity=0.867 Sum_probs=214.1
Q ss_pred CcEEEecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCc
Q 043492 1 PLFIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 1 p~~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 80 (278)
|+.||+|++.+.+|||||+||+......|+.+++++|||||+||++|.+.........+.....++++|+.+++...+..
T Consensus 5 ~l~v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 5 PLLVYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CeEEEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccc
Confidence 68899999999999999999999888899999999999999999999877766667778899999999998888887776
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCcc--CCCCCeEEEec
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESF--NFSIPVTVIGT 158 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~P~Lii~g 158 (278)
..+.|.++++|+|||.||.+|..++..+.+.. ...+++++++++|++++... .++.|+++++.+. +.++|+|+|++
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~-~~~~~~ali~lDPVdG~~~~-~~~~P~v~~~~p~s~~~~~P~lviGt 162 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSS-LDLRFSALILLDPVDGMSKG-SQTEPPVLTYTPQSFDFSMPALVIGT 162 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccc-cccceeEEEEeccccccccc-cCCCCccccCcccccCCCCCeEEEec
Confidence 67789999999999999999999998763211 12479999999999988776 7788888888444 45699999999
Q ss_pred CCCCCcC--CCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhH
Q 043492 159 GLGGLAK--CVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSG 236 (278)
Q Consensus 159 ~~~~~~~--~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (278)
+.+++.+ +...|+|...++.+||+.++.|. +.++++++||++|+|.......+....+++|+++..+++.+|+++.+
T Consensus 163 GLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~-~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~f~~g 241 (259)
T PF12740_consen 163 GLGGEPRNPLFPPCAPAGVNYREFFDECKPPS-WHFVAKDYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRRFVGG 241 (259)
T ss_pred ccCcccccccCCCCCCCCCCHHHHHHhcCCCE-EEEEeCCCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHHHHHH
Confidence 9876532 44679999999999999999999 99999999999999998554444222456999887799999999999
Q ss_pred HHHHHHHHHhcCChhhH
Q 043492 237 IAVAFLKAYFDSEGDDF 253 (278)
Q Consensus 237 ~~~afl~~~l~~~~~~~ 253 (278)
+++|||+.+|+|+.+++
T Consensus 242 ~~vAfl~~~l~g~~~~~ 258 (259)
T PF12740_consen 242 IMVAFLNAQLQGDPDDL 258 (259)
T ss_pred HHHHHHHHHhcCchhhc
Confidence 99999999999997655
No 3
>PLN00021 chlorophyllase
Probab=100.00 E-value=5.4e-41 Score=287.92 Aligned_cols=270 Identities=52% Similarity=0.914 Sum_probs=221.4
Q ss_pred CcEEEecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCc
Q 043492 1 PLFIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 1 p~~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 80 (278)
|+.||.|...+++|+|||+||++++...|..++++|+++||+|+++|+++...........+..++++|+.+.+...++.
T Consensus 40 p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~ 119 (313)
T PLN00021 40 PLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPE 119 (313)
T ss_pred eEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhccc
Confidence 67899999888999999999999999999999999999999999999988654444445567788899987766665554
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCcccc--CccCCCCCeEEEec
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDY--ESFNFSIPVTVIGT 158 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~P~Lii~g 158 (278)
...+|.++++++|||+||.+|+.++...+... ...+++++++++|+.+..+. ....+.++.+ .+.++.+|+|++++
T Consensus 120 ~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-~~~~v~ali~ldPv~g~~~~-~~~~p~il~~~~~s~~~~~P~liig~ 197 (313)
T PLN00021 120 GVRPDLSKLALAGHSRGGKTAFALALGKAAVS-LPLKFSALIGLDPVDGTSKG-KQTPPPVLTYAPHSFNLDIPVLVIGT 197 (313)
T ss_pred ccccChhheEEEEECcchHHHHHHHhhccccc-cccceeeEEeeccccccccc-cCCCCcccccCcccccCCCCeEEEec
Confidence 45578899999999999999999998876421 11368999999999877543 2233444443 33457899999999
Q ss_pred CCCCCcC--CCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhH
Q 043492 159 GLGGLAK--CVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSG 236 (278)
Q Consensus 159 ~~~~~~~--~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (278)
+.+++.+ ....|+|...++.++|+.++.++ +++++++++|++|+|...+.+.+.. ..++|++|. +++.+|+.+.+
T Consensus 198 g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~~-~~~~c~~g~-~~~~~r~~~~g 274 (313)
T PLN00021 198 GLGGEPRNPLFPPCAPDGVNHAEFFNECKAPA-VHFVAKDYGHMDMLDDDTSGIRGKI-TGCMCKNGK-PRKPMRRFVGG 274 (313)
T ss_pred CCCcccccccccccCCCCCCHHHHHHhcCCCe-eeeeecCCCcceeecCCCccccccc-cccccCCCC-chHHHHHHHHH
Confidence 8754211 11268889889999999999988 9999999999999999876666554 557999987 99999999999
Q ss_pred HHHHHHHHHhcCChhhHHHHhhCCCCCCeeeccccccCC
Q 043492 237 IAVAFLKAYFDSEGDDFKTILADPSVAPITLGQVEFIPA 275 (278)
Q Consensus 237 ~~~afl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (278)
++++||+.+|.|+.+++..+..+|+++|++|+.+||..+
T Consensus 275 ~~~aFl~~~l~~~~~~~~~~~~~~~~~p~~l~~~~~~~~ 313 (313)
T PLN00021 275 AVVAFLKAYLEGDTGDLDAIVDGPSLAPVKLDPVEFIEE 313 (313)
T ss_pred HHHHHHHHHhcCchhHHHHHhcCCCCCCeeccccccccC
Confidence 999999999999999999999999999999999999753
No 4
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.95 E-value=1.9e-27 Score=208.99 Aligned_cols=205 Identities=23% Similarity=0.283 Sum_probs=121.9
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCC------CC-------------C--------------
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPP------KG-------------N-------------- 57 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~------~~-------------~-------------- 57 (278)
+++|||||+||+++++..|+.+|..|||+||+|+++||+..... +. .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 78999999999999999999999999999999999999753211 00 0
Q ss_pred ---------chhhHHHHHHHHhhhhhh------hcC-------CccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCC
Q 043492 58 ---------KEVDAAAEEINWLPKGLQ------SHL-------PENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLG 115 (278)
Q Consensus 58 ---------~~~~~~~~~~~~l~~~l~------~~~-------~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~ 115 (278)
.+..++..+++.|.+ ++ ..+ ...+++|.++|+++|||+||++++.++..+.
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~-i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~------ 250 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEE-INSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT------ 250 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc------
Confidence 001122334444321 11 011 1356789999999999999999999998875
Q ss_pred cccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHH--Hh--cCCccee
Q 043492 116 LKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFN--RC--TSSDRAH 191 (278)
Q Consensus 116 ~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~--~~--~~~~~~~ 191 (278)
++++.|++|||...... ... ..+++|+|+|+.+... .+...+. +. .....++
T Consensus 251 -r~~~~I~LD~W~~Pl~~------~~~----~~i~~P~L~InSe~f~-------------~~~~~~~~~~~~~~~~~~~~ 306 (379)
T PF03403_consen 251 -RFKAGILLDPWMFPLGD------EIY----SKIPQPLLFINSESFQ-------------WWENIFRMKKVISNNKESRM 306 (379)
T ss_dssp -T--EEEEES---TTS-G------GGG----GG--S-EEEEEETTT---------------HHHHHHHHTT--TTS-EEE
T ss_pred -CcceEEEeCCcccCCCc------ccc----cCCCCCEEEEECcccC-------------ChhhHHHHHHHhccCCCcEE
Confidence 68999999999854111 111 4589999999888711 1112221 11 1233489
Q ss_pred EEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHHhcC
Q 043492 192 FDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAYFDS 248 (278)
Q Consensus 192 ~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~l~~ 248 (278)
+.+.|+.|.+|+|.+. +.+.++.+.+-..|++|+.++.++.++++++||+.||.-
T Consensus 307 ~ti~gt~H~s~sD~~l--l~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 307 LTIKGTAHLSFSDFPL--LSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp EEETT--GGGGSGGGG--TS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred EEECCCcCCCcchhhh--hhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999875 222221222334677899999999999999999999874
No 5
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.94 E-value=3e-26 Score=194.42 Aligned_cols=230 Identities=20% Similarity=0.269 Sum_probs=183.0
Q ss_pred CcEEEecCC-CC-----CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCC------C---------Cch
Q 043492 1 PLFIVFPDN-QG-----KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPK------G---------NKE 59 (278)
Q Consensus 1 p~~i~~P~~-~~-----~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~------~---------~~~ 59 (278)
|+.+|.|.. .+ ++|+|+++||.|++...+.+++++||++||+|.+++|+|+...+ . -++
T Consensus 53 ~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~er 132 (365)
T COG4188 53 PVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWER 132 (365)
T ss_pred ccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcc
Confidence 577888863 23 79999999999999999999999999999999999999964211 1 145
Q ss_pred hhHHHHHHHHhhhhhhhcCC-ccccCCCCceEEEEeChhHHHHHHHHhhCCCC------C--------------------
Q 043492 60 VDAAAEEINWLPKGLQSHLP-ENVVADLNYSALMGHSRGGLTAFALAQGYATN------P-------------------- 112 (278)
Q Consensus 60 ~~~~~~~~~~l~~~l~~~~~-~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~------~-------------------- 112 (278)
+.+++.++++|.+. ... + ..+++|.++|+++|||+||++++.+++..... |
T Consensus 133 p~dis~lLd~L~~~-~~s-P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q 210 (365)
T COG4188 133 PLDISALLDALLQL-TAS-PALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQ 210 (365)
T ss_pred cccHHHHHHHHHHh-hcC-cccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhcc
Confidence 67889999998764 332 5 67889999999999999999999998765431 0
Q ss_pred ------------CCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHH
Q 043492 113 ------------PLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQF 180 (278)
Q Consensus 113 ------------~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~ 180 (278)
....++++++++.|..++.|+...+ .++++|++++.|.. |.++|...++...
T Consensus 211 ~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl---------~~v~~P~~~~a~s~-------D~~aP~~~~~~~~ 274 (365)
T COG4188 211 CAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGL---------VKVTDPVLLAAGSA-------DGFAPPVTEQIRP 274 (365)
T ss_pred ccccccchhhhccccccceeeeeccCCcccccccccc---------eeeecceeeecccc-------cccCCcccccccc
Confidence 1235789999999999988874333 57899999999998 7788888888889
Q ss_pred HHHhcCCcceeEEecCCCccccCCCCCc---------------chhhhcccccccCC-CCCCchhHHHHhhHHHHHHHHH
Q 043492 181 FNRCTSSDRAHFDATYYGHMDVLDDCPP---------------DLKSLAISKCMCTN-GTLPRQPMRQCVSGIAVAFLKA 244 (278)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~H~~f~d~~~~---------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~afl~~ 244 (278)
+..+.++.|++..++|+.|++|++.+.+ .+.+.. -.+|.. +..++...++.+....+.||+.
T Consensus 275 f~~l~g~~k~~~~vp~a~h~sfl~~~~~~~~~~~~~~~~s~~l~~~~~~--~~i~~~~~~~d~~~~~~~~~~~~l~f~~~ 352 (365)
T COG4188 275 FGYLPGALKYLRLVPGATHFSFLELCKEGQDIAAYTYRKSAALALAGLY--VPICEEAGGFDRAAYAQLISTRVLPFFDV 352 (365)
T ss_pred cccCCcchhheeecCCCccccccccCcccchhhhhhhhhhhhccccccc--cccccccCcccchhHHHHHhhcccchhhh
Confidence 9999998779999999999999998775 222221 235653 3468888888888899999999
Q ss_pred HhcCCh
Q 043492 245 YFDSEG 250 (278)
Q Consensus 245 ~l~~~~ 250 (278)
+++...
T Consensus 353 ~~kt~~ 358 (365)
T COG4188 353 TLKTPA 358 (365)
T ss_pred hccchh
Confidence 887754
No 6
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.91 E-value=1.5e-23 Score=172.20 Aligned_cols=210 Identities=20% Similarity=0.179 Sum_probs=145.9
Q ss_pred CCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCC----------CC---------------C-------
Q 043492 10 QGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPP----------KG---------------N------- 57 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~----------~~---------------~------- 57 (278)
.+++|+|||+||+++++..|+.+|-.||||||+|.+++|+..... +. +
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 568999999999999999999999999999999999999876410 00 0
Q ss_pred ----chhhHHHHHHHHhhhhhh------hcCC--------ccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccc
Q 043492 58 ----KEVDAAAEEINWLPKGLQ------SHLP--------ENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFS 119 (278)
Q Consensus 58 ----~~~~~~~~~~~~l~~~l~------~~~~--------~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~ 119 (278)
.+...+..++..|.+ ++ ..++ .++.+|.++++|+|||+||++++.....+. +++
T Consensus 195 eqv~~R~~Ec~~aL~il~~-i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-------~Fr 266 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQ-INDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-------DFR 266 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-hhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-------cee
Confidence 012223333333322 11 1122 267799999999999999999998887765 688
Q ss_pred eEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhc-CCcceeEEecCCC
Q 043492 120 ALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCT-SSDRAHFDATYYG 198 (278)
Q Consensus 120 a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~-~~~~~~~~~~g~~ 198 (278)
..|++|.|.-+ .++.. -+.++.|+|+|..++.. .+ +++...-+... +.....+++.|+=
T Consensus 267 caI~lD~WM~P-l~~~~---------~~~arqP~~finv~~fQ--------~~--en~~vmKki~~~n~g~~~it~~GsV 326 (399)
T KOG3847|consen 267 CAIALDAWMFP-LDQLQ---------YSQARQPTLFINVEDFQ--------WN--ENLLVMKKIESQNEGNHVITLDGSV 326 (399)
T ss_pred eeeeeeeeecc-cchhh---------hhhccCCeEEEEccccc--------ch--hHHHHHHhhhCCCccceEEEEccce
Confidence 88999987744 11111 14689999999877611 11 11221112222 2223789999999
Q ss_pred ccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHHhcCC
Q 043492 199 HMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAYFDSE 249 (278)
Q Consensus 199 H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~l~~~ 249 (278)
|-+|.|.+. +.+..+.+.+-..|..|+-...+...+.+++||+.++.+.
T Consensus 327 HqnfsDfpf--v~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~d~~ 375 (399)
T KOG3847|consen 327 HQNFSDFPF--VTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHLDLV 375 (399)
T ss_pred ecccccCcc--ccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999875 2222223334457888999999999999999999998764
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.86 E-value=4.5e-20 Score=162.28 Aligned_cols=208 Identities=16% Similarity=0.140 Sum_probs=134.8
Q ss_pred EEecCCCCCceEEEEeCCCCCCChh-HHHHHHHHHHcCcEEEEeccCCCCCCCCC-chhhHHHHHHHHhhhhhhhcCCcc
Q 043492 4 IVFPDNQGKYEVILFFPGTSVSNTS-YSKLFDHLASHGYIVVSPQLYNLMPPKGN-KEVDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 4 i~~P~~~~~~Pvvv~~hG~~~~~~~-~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
.+.|.+..+.|+|||+||++++... |..+++.|+++||.|+++|++|+|.+... ....++...++.+.+.+..+. ..
T Consensus 78 ~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~-~~ 156 (349)
T PLN02385 78 SWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIK-GN 156 (349)
T ss_pred EEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHH-hc
Confidence 4556655567999999999988664 57899999999999999999999866532 111233333333222122111 01
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCC-------------------------CCC
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYF-------------------------HSE 136 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~-------------------------~~~ 136 (278)
...+..++.|+||||||.+++.++..+++ +++++++++|....... ...
T Consensus 157 ~~~~~~~~~LvGhSmGG~val~~a~~~p~------~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 230 (349)
T PLN02385 157 PEFRGLPSFLFGQSMGGAVALKVHLKQPN------AWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKD 230 (349)
T ss_pred cccCCCCEEEEEeccchHHHHHHHHhCcc------hhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCc
Confidence 11334589999999999999999999887 67888888775421000 000
Q ss_pred CCCC--------------cccc---------------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHH
Q 043492 137 LDPP--------------ILDY---------------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFF 181 (278)
Q Consensus 137 ~~~~--------------~~~~---------------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~ 181 (278)
+... ...+ ...++++|+|+|+|++ |..+|.. ....++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~-------D~vv~~~-~~~~l~ 302 (349)
T PLN02385 231 LAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEA-------DKVTDPS-VSKFLY 302 (349)
T ss_pred cccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCC-------CCccChH-HHHHHH
Confidence 0000 0000 1136899999999999 7777753 344566
Q ss_pred HHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHHhc
Q 043492 182 NRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAYFD 247 (278)
Q Consensus 182 ~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~l~ 247 (278)
+.+..+.+.+.+++|++|.-+.+. +++..+.+...+.+||+.++.
T Consensus 303 ~~~~~~~~~l~~i~~~gH~l~~e~---------------------p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 303 EKASSSDKKLKLYEDAYHSILEGE---------------------PDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHcCCCCceEEEeCCCeeecccCC---------------------ChhhHHHHHHHHHHHHHHhcc
Confidence 777655558899999999844222 233334566778999998763
No 8
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.86 E-value=8.1e-21 Score=145.68 Aligned_cols=145 Identities=24% Similarity=0.308 Sum_probs=113.5
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEe
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGH 94 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~Gh 94 (278)
+||++||++++...|..+++.|+++||.|+.+|+++.+.+ ....+..++++++.+ ...|.++++++||
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDS---DGADAVERVLADIRA---------GYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTS---HHSHHHHHHHHHHHH---------HHCTCCEEEEEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCcc---chhHHHHHHHHHHHh---------hcCCCCcEEEEEE
Confidence 6899999999999999999999999999999999887654 333456666666421 1137889999999
Q ss_pred ChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEEecCCCCCcCCCCCCCCcc
Q 043492 95 SRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIGTGLGGLAKCVVPCAPEK 174 (278)
Q Consensus 95 S~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~ 174 (278)
|+||.+++.++.+++ +++++++++|+... . .....++|+++++|++ |...+.
T Consensus 69 S~Gg~~a~~~~~~~~-------~v~~~v~~~~~~~~----~---------~~~~~~~pv~~i~g~~-------D~~~~~- 120 (145)
T PF12695_consen 69 SMGGAIAANLAARNP-------RVKAVVLLSPYPDS----E---------DLAKIRIPVLFIHGEN-------DPLVPP- 120 (145)
T ss_dssp THHHHHHHHHHHHST-------TESEEEEESESSGC----H---------HHTTTTSEEEEEEETT--------SSSHH-
T ss_pred ccCcHHHHHHhhhcc-------ceeEEEEecCccch----h---------hhhccCCcEEEEEECC-------CCcCCH-
Confidence 999999999999874 79999999984210 1 1135788999999999 666655
Q ss_pred ccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 175 ENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
....+.++.++.+. ++++++|++|+
T Consensus 121 ~~~~~~~~~~~~~~-~~~~i~g~~H~ 145 (145)
T PF12695_consen 121 EQVRRLYEALPGPK-ELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHHCSSE-EEEEETTS-TT
T ss_pred HHHHHHHHHcCCCc-EEEEeCCCcCc
Confidence 45667888888555 89999999996
No 9
>PHA02857 monoglyceride lipase; Provisional
Probab=99.86 E-value=7.4e-20 Score=155.60 Aligned_cols=202 Identities=13% Similarity=0.082 Sum_probs=131.9
Q ss_pred EEEecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc-hhhHHHHHHHHhhhhhhhcCCcc
Q 043492 3 FIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK-EVDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 3 ~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
.+|.|. ..+.++|+++||++++...|..+++.|+++||.|+++|++|+|.+.... ...+....++.+.+.+.....
T Consensus 16 ~~~~~~-~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~-- 92 (276)
T PHA02857 16 KYWKPI-TYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKS-- 92 (276)
T ss_pred EeccCC-CCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHh--
Confidence 456675 3456899999999999999999999999999999999999998654321 112222222222222221111
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCC----------------CCC---CCCCCcc
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPY----------------FHS---ELDPPIL 142 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~----------------~~~---~~~~~~~ 142 (278)
.....++.|+|||+||.+|+.++...++ .++++++++|...... ... .+.+..+
T Consensus 93 -~~~~~~~~lvG~S~GG~ia~~~a~~~p~------~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (276)
T PHA02857 93 -TYPGVPVFLLGHSMGATISILAAYKNPN------LFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESV 165 (276)
T ss_pred -hCCCCCEEEEEcCchHHHHHHHHHhCcc------ccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhhc
Confidence 1234589999999999999999988886 6889999988643210 000 0000000
Q ss_pred ---------------------cc---------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcC
Q 043492 143 ---------------------DY---------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTS 186 (278)
Q Consensus 143 ---------------------~~---------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~ 186 (278)
.. ...++++|+|+++|++ |..+|.. ...++.+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~-------D~i~~~~-~~~~l~~~~~~ 237 (276)
T PHA02857 166 SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTN-------NEISDVS-GAYYFMQHANC 237 (276)
T ss_pred cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCC-------CCcCChH-HHHHHHHHccC
Confidence 00 1136889999999999 7777753 34445565544
Q ss_pred CcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHH
Q 043492 187 SDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAY 245 (278)
Q Consensus 187 ~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~ 245 (278)
.. .+.++++++|+-+.+ ....++.+...+.+||+..
T Consensus 238 ~~-~~~~~~~~gH~~~~e----------------------~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 238 NR-EIKIYEGAKHHLHKE----------------------TDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred Cc-eEEEeCCCcccccCC----------------------chhHHHHHHHHHHHHHHHh
Confidence 33 789999999984422 2233455566778888864
No 10
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.86 E-value=6.2e-20 Score=160.15 Aligned_cols=209 Identities=15% Similarity=0.120 Sum_probs=133.6
Q ss_pred EecCCC-CCceEEEEeCCCCCCCh-hHHHHHHHHHHcCcEEEEeccCCCCCCCCCch-hhHHHHHHHHhhhhhhhcCCcc
Q 043492 5 VFPDNQ-GKYEVILFFPGTSVSNT-SYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE-VDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 5 ~~P~~~-~~~Pvvv~~hG~~~~~~-~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
|.|... ...++|||+||++.+.. .|..+++.|+++||.|+++|++|+|.+..... ..+.....+.+..-++.+.. .
T Consensus 50 ~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~-~ 128 (330)
T PLN02298 50 WLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQ-R 128 (330)
T ss_pred EecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHh-c
Confidence 445433 45789999999986643 57788999999999999999999987653211 11222222221111111111 1
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCC------------------------C-CC
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYF------------------------H-SE 136 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~------------------------~-~~ 136 (278)
...+..+++|+||||||.+|+.++..++. +++++++++|+...... . ..
T Consensus 129 ~~~~~~~i~l~GhSmGG~ia~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (330)
T PLN02298 129 EEFQGLPRFLYGESMGGAICLLIHLANPE------GFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTAD 202 (330)
T ss_pred ccCCCCCEEEEEecchhHHHHHHHhcCcc------cceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCC
Confidence 11233479999999999999999998886 68889988876421100 0 00
Q ss_pred -CC---------------CCccc-------------------cCccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHH
Q 043492 137 -LD---------------PPILD-------------------YESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFF 181 (278)
Q Consensus 137 -~~---------------~~~~~-------------------~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~ 181 (278)
+. +..+. ....++++|+|+++|+. |..+|.. ....++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~-------D~ivp~~-~~~~l~ 274 (330)
T PLN02298 203 LLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSA-------DVVTDPD-VSRALY 274 (330)
T ss_pred cccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCC-------CCCCCHH-HHHHHH
Confidence 00 00000 01136889999999999 7777763 345567
Q ss_pred HHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHHhcCC
Q 043492 182 NRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAYFDSE 249 (278)
Q Consensus 182 ~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~l~~~ 249 (278)
+.+..+.+.+.+++|++|+-+.+. ++...+.+...+..||+.++...
T Consensus 275 ~~i~~~~~~l~~~~~a~H~~~~e~---------------------pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 275 EEAKSEDKTIKIYDGMMHSLLFGE---------------------PDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred HHhccCCceEEEcCCcEeeeecCC---------------------CHHHHHHHHHHHHHHHHHhccCC
Confidence 777655558899999999854322 23334566677889999987554
No 11
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=1.4e-19 Score=152.85 Aligned_cols=174 Identities=16% Similarity=0.223 Sum_probs=123.8
Q ss_pred EEEecC--CCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCC-CCCCC-------CchhhHHHHHHHHhhh
Q 043492 3 FIVFPD--NQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNL-MPPKG-------NKEVDAAAEEINWLPK 72 (278)
Q Consensus 3 ~i~~P~--~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~-~~~~~-------~~~~~~~~~~~~~l~~ 72 (278)
++..|. ...+.++||++||++++...|..+++.|+++||.|+.+|++++ |.+.+ .....|+..+++|+.+
T Consensus 25 wl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~ 104 (307)
T PRK13604 25 WETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNT 104 (307)
T ss_pred EEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHh
Confidence 344564 3457789999999999888899999999999999999999876 54432 1235677888888643
Q ss_pred hhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCC--------C-----CCCCCCC
Q 043492 73 GLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIP--------Y-----FHSELDP 139 (278)
Q Consensus 73 ~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~--------~-----~~~~~~~ 139 (278)
.+.++|+|+||||||.+|+.+|... +++++++.+|+.... . ....+..
T Consensus 105 -----------~~~~~I~LiG~SmGgava~~~A~~~--------~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~ 165 (307)
T PRK13604 105 -----------RGINNLGLIAASLSARIAYEVINEI--------DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPE 165 (307)
T ss_pred -----------cCCCceEEEEECHHHHHHHHHhcCC--------CCCEEEEcCCcccHHHHHHHhhhcccccCccccccc
Confidence 1346899999999999987776532 478899988887621 0 0000100
Q ss_pred ------Ccc------------ccC--------ccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEE
Q 043492 140 ------PIL------------DYE--------SFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFD 193 (278)
Q Consensus 140 ------~~~------------~~~--------~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~ 193 (278)
..+ ... ..++++|+|+|||+. |..+|. ....++|+.++...+.++.
T Consensus 166 ~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~-------D~lVp~-~~s~~l~e~~~s~~kkl~~ 237 (307)
T PRK13604 166 DLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANN-------DSWVKQ-SEVIDLLDSIRSEQCKLYS 237 (307)
T ss_pred ccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCC-------CCccCH-HHHHHHHHHhccCCcEEEE
Confidence 000 001 135789999999999 777776 3455788888754558999
Q ss_pred ecCCCccccCC
Q 043492 194 ATYYGHMDVLD 204 (278)
Q Consensus 194 ~~g~~H~~f~d 204 (278)
++|++|. |..
T Consensus 238 i~Ga~H~-l~~ 247 (307)
T PRK13604 238 LIGSSHD-LGE 247 (307)
T ss_pred eCCCccc-cCc
Confidence 9999997 543
No 12
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.81 E-value=4.3e-18 Score=145.73 Aligned_cols=196 Identities=22% Similarity=0.268 Sum_probs=138.4
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCC--CCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPK--GNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
.+||++||++.+...|..+++.|+..||.|++.|++|+|.+. ....+.++....+.+..-++.... .--..++.+
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~---~~~~~p~~l 111 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAE---PDPGLPVFL 111 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhc---cCCCCCeEE
Confidence 799999999999999999999999999999999999998874 444444444444443221221110 012358999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCC--CC-----------CCC------CC----Cccc-----
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPY--FH-----------SEL------DP----PILD----- 143 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~--~~-----------~~~------~~----~~~~----- 143 (278)
+||||||.+++.++.+.+. +++++++.+|+..... .. ..+ .. ....
T Consensus 112 ~gHSmGg~Ia~~~~~~~~~------~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr 185 (298)
T COG2267 112 LGHSMGGLIALLYLARYPP------RIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSR 185 (298)
T ss_pred EEeCcHHHHHHHHHHhCCc------cccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhc
Confidence 9999999999999999885 7888888888876541 00 000 00 0000
Q ss_pred -------c-----------------------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCC
Q 043492 144 -------Y-----------------------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSS 187 (278)
Q Consensus 144 -------~-----------------------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~ 187 (278)
+ ....+.+|+|+++|+. |.+++......++++++..+
T Consensus 186 ~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~-------D~vv~~~~~~~~~~~~~~~~ 258 (298)
T COG2267 186 DPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGD-------DRVVDNVEGLARFFERAGSP 258 (298)
T ss_pred CHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCC-------CccccCcHHHHHHHHhcCCC
Confidence 0 0146789999999998 66666323466788888888
Q ss_pred cceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHHhc
Q 043492 188 DRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAYFD 247 (278)
Q Consensus 188 ~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~l~ 247 (278)
++.+.+++|+.|--+.+ ++..++.+-+.+.+||+.++.
T Consensus 259 ~~~~~~~~g~~He~~~E----------------------~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 259 DKELKVIPGAYHELLNE----------------------PDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CceEEecCCcchhhhcC----------------------cchHHHHHHHHHHHHHHhhcc
Confidence 77999999999985532 233335556778888887664
No 13
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.81 E-value=5e-19 Score=145.49 Aligned_cols=203 Identities=19% Similarity=0.222 Sum_probs=121.5
Q ss_pred cEEEecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCC--CCCCchhh-HH--------HHHHHHh
Q 043492 2 LFIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMP--PKGNKEVD-AA--------AEEINWL 70 (278)
Q Consensus 2 ~~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~--~~~~~~~~-~~--------~~~~~~l 70 (278)
++++.|.+.++.|.||++|+..|-...+..+++.||+.||+|++||+.+... +....... .. ..+...+
T Consensus 3 ay~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (218)
T PF01738_consen 3 AYVARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADL 82 (218)
T ss_dssp EEEEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHH
T ss_pred EEEEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHH
Confidence 5788998878999999999999988999999999999999999999865433 22111100 00 1111221
Q ss_pred hhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCC
Q 043492 71 PKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFS 150 (278)
Q Consensus 71 ~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 150 (278)
...+.. +......+.++|+++|+|+||.+|+.++...+ .+++.+.+.|.... .... ....+++
T Consensus 83 ~aa~~~-l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~-------~~~a~v~~yg~~~~-------~~~~--~~~~~~~ 145 (218)
T PF01738_consen 83 QAAVDY-LRAQPEVDPGKIGVVGFCWGGKLALLLAARDP-------RVDAAVSFYGGSPP-------PPPL--EDAPKIK 145 (218)
T ss_dssp HHHHHH-HHCTTTCEEEEEEEEEETHHHHHHHHHHCCTT-------TSSEEEEES-SSSG-------GGHH--HHGGG--
T ss_pred HHHHHH-HHhccccCCCcEEEEEEecchHHhhhhhhhcc-------ccceEEEEcCCCCC-------Ccch--hhhcccC
Confidence 111111 11223357789999999999999999998774 68899998871111 0000 0124689
Q ss_pred CCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhc--CCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCch
Q 043492 151 IPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCT--SSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQ 228 (278)
Q Consensus 151 ~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~--~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~ 228 (278)
+|+|++.|++ |+..+.. ....+.+.++ +....+.+++|++|. |.+.... ..++.
T Consensus 146 ~P~l~~~g~~-------D~~~~~~-~~~~~~~~l~~~~~~~~~~~y~ga~Hg-F~~~~~~---------------~~~~~ 201 (218)
T PF01738_consen 146 APVLILFGEN-------DPFFPPE-EVEALEEALKAAGVDVEVHVYPGAGHG-FANPSRP---------------PYDPA 201 (218)
T ss_dssp S-EEEEEETT--------TTS-HH-HHHHHHHHHHCTTTTEEEEEETT--TT-TTSTTST---------------T--HH
T ss_pred CCEeecCccC-------CCCCChH-HHHHHHHHHHhcCCcEEEEECCCCccc-ccCCCCc---------------ccCHH
Confidence 9999999999 6666653 1233444552 222288999999997 6554331 12334
Q ss_pred hHHHHhhHHHHHHHHHHh
Q 043492 229 PMRQCVSGIAVAFLKAYF 246 (278)
Q Consensus 229 ~~~~~~~~~~~afl~~~l 246 (278)
. .+.....+++||++||
T Consensus 202 a-a~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 202 A-AEDAWQRTLAFFKRHL 218 (218)
T ss_dssp H-HHHHHHHHHHHHCC--
T ss_pred H-HHHHHHHHHHHHHhcC
Confidence 4 3455677999999886
No 14
>PRK10566 esterase; Provisional
Probab=99.81 E-value=9.8e-19 Score=146.46 Aligned_cols=182 Identities=15% Similarity=0.141 Sum_probs=109.7
Q ss_pred EEEecCC--CCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCC-CC--chhh----HHHHHHHHhhhh
Q 043492 3 FIVFPDN--QGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPK-GN--KEVD----AAAEEINWLPKG 73 (278)
Q Consensus 3 ~i~~P~~--~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-~~--~~~~----~~~~~~~~l~~~ 73 (278)
+.|.|.. +++.|+||++||++++...|..+++.|+++||.|+++|++|++.+. .. .... .....++.+...
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 4566754 3468999999999999989999999999999999999999876431 11 0000 111111111111
Q ss_pred hhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC------CCCCCCC-CC-------
Q 043492 74 LQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI------PYFHSEL-DP------- 139 (278)
Q Consensus 74 l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~------~~~~~~~-~~------- 139 (278)
+..+. ....+|.++|+++|||+||.+++.++..+++ +++.+.+.+.... .+..... .+
T Consensus 95 ~~~l~-~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (249)
T PRK10566 95 RAAIR-EEGWLLDDRLAVGGASMGGMTALGIMARHPW-------VKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFN 166 (249)
T ss_pred HHHHH-hcCCcCccceeEEeecccHHHHHHHHHhCCC-------eeEEEEeeCcHHHHHHHHHhcccccccccccHHHHH
Confidence 11111 1234688999999999999999999988774 3433332211100 0000000 00
Q ss_pred ----CccccC----ccCC-CCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCc----ceeEEecCCCcc
Q 043492 140 ----PILDYE----SFNF-SIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSD----RAHFDATYYGHM 200 (278)
Q Consensus 140 ----~~~~~~----~~~~-~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~----~~~~~~~g~~H~ 200 (278)
....++ ..++ +.|+|+++|++ |..+|.. ...++++.++... ..+++++|++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~-------D~~v~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~H~ 232 (249)
T PRK10566 167 NIVAPLAEWEVTHQLEQLADRPLLLWHGLA-------DDVVPAA-ESLRLQQALRERGLDKNLTCLWEPGVRHR 232 (249)
T ss_pred HHHHHHhhcChhhhhhhcCCCCEEEEEcCC-------CCcCCHH-HHHHHHHHHHhcCCCcceEEEecCCCCCc
Confidence 000000 1234 68999999999 6777763 3445566564321 267788999997
No 15
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.81 E-value=2e-18 Score=142.52 Aligned_cols=205 Identities=15% Similarity=0.117 Sum_probs=136.8
Q ss_pred EecCC-CCCceEEEEeCCCCCCC-hhHHHHHHHHHHcCcEEEEeccCCCCCCCCC-chhhHHHHHHHHhhhhhhhcCCcc
Q 043492 5 VFPDN-QGKYEVILFFPGTSVSN-TSYSKLFDHLASHGYIVVSPQLYNLMPPKGN-KEVDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 5 ~~P~~-~~~~Pvvv~~hG~~~~~-~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
|.|.. +.+..+|+++||++... ..|..++++|+..||.|+++|+.|+|.+++. ..+.++..+++.+...+......
T Consensus 45 W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~- 123 (313)
T KOG1455|consen 45 WLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKER- 123 (313)
T ss_pred cccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhc-
Confidence 45644 36788999999999876 6889999999999999999999999877643 33455555555543333322111
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC------------------------CC-
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH------------------------SE- 136 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~------------------------~~- 136 (278)
...-.-...++||||||++++.++.++|. ...+++++.|.....-.. ..
T Consensus 124 ~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~------~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d 197 (313)
T KOG1455|consen 124 EENKGLPRFLFGESMGGAVALLIALKDPN------FWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKD 197 (313)
T ss_pred cccCCCCeeeeecCcchHHHHHHHhhCCc------ccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCcc
Confidence 01122367999999999999999998876 344455544444221000 00
Q ss_pred C----------------CCCcccc-------------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHH
Q 043492 137 L----------------DPPILDY-------------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFF 181 (278)
Q Consensus 137 ~----------------~~~~~~~-------------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~ 181 (278)
+ .|-.+.. +..++++|+|++||+. |.++.. ...+.+|
T Consensus 198 ~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~d-------D~VTDp-~~Sk~Ly 269 (313)
T KOG1455|consen 198 IIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTD-------DKVTDP-KVSKELY 269 (313)
T ss_pred ccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCC-------CcccCc-HHHHHHH
Confidence 0 0000000 1157899999999999 555555 3467799
Q ss_pred HHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHH
Q 043492 182 NRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAY 245 (278)
Q Consensus 182 ~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~ 245 (278)
+.+.+..|++..+||+=|.=+. | ++++....+-+-+.+||+..
T Consensus 270 e~A~S~DKTlKlYpGm~H~Ll~-------------------g--E~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 270 EKASSSDKTLKLYPGMWHSLLS-------------------G--EPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HhccCCCCceeccccHHHHhhc-------------------C--CCchhHHHHHHHHHHHHHhc
Confidence 9999888899999999997221 1 23444567777788998853
No 16
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.81 E-value=4.3e-18 Score=151.18 Aligned_cols=199 Identities=16% Similarity=0.167 Sum_probs=130.4
Q ss_pred EEEecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc----h----hhHHHHHHHHhhhhh
Q 043492 3 FIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK----E----VDAAAEEINWLPKGL 74 (278)
Q Consensus 3 ~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~----~----~~~~~~~~~~l~~~l 74 (278)
..|.|....+.|+|||+||++++...|..+++.|+++||.|+++|++|+|.+.... . ..++..+++.+..
T Consensus 126 ~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~-- 203 (395)
T PLN02652 126 RSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRS-- 203 (395)
T ss_pred EEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHH--
Confidence 35667555567899999999999888999999999999999999999998655321 1 1222223333211
Q ss_pred hhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCC---------------------
Q 043492 75 QSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYF--------------------- 133 (278)
Q Consensus 75 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~--------------------- 133 (278)
..+..++.++||||||.+++.++. +++.. .+++++++.+|+......
T Consensus 204 --------~~~~~~i~lvGhSmGG~ial~~a~-~p~~~---~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~ 271 (395)
T PLN02652 204 --------ENPGVPCFLFGHSTGGAVVLKAAS-YPSIE---DKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFK 271 (395)
T ss_pred --------hCCCCCEEEEEECHHHHHHHHHHh-ccCcc---cccceEEEECcccccccchHHHHHHHHHHHHhCCCCccc
Confidence 012347999999999999998775 33210 157888888887532110
Q ss_pred C---C--CC------------CCCccc-------------------cCccCCCCCeEEEecCCCCCcCCCCCCCCccccH
Q 043492 134 H---S--EL------------DPPILD-------------------YESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENH 177 (278)
Q Consensus 134 ~---~--~~------------~~~~~~-------------------~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~ 177 (278)
. . .+ .+..+. ....++++|+|+++|++ |..+|. ...
T Consensus 272 ~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~-------D~vvp~-~~a 343 (395)
T PLN02652 272 GANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTA-------DRVTDP-LAS 343 (395)
T ss_pred CcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCC-------CCCCCH-HHH
Confidence 0 0 00 000000 01145789999999999 777775 334
Q ss_pred HHHHHHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHHhc
Q 043492 178 QQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAYFD 247 (278)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~l~ 247 (278)
...++.+....+.+.+++|++|.-+.+.. .+.+.+.+..||+.++.
T Consensus 344 ~~l~~~~~~~~k~l~~~~ga~H~l~~e~~------------------------~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 344 QDLYNEAASRHKDIKLYDGFLHDLLFEPE------------------------REEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHhcCCCCceEEEECCCeEEeccCCC------------------------HHHHHHHHHHHHHHHhh
Confidence 55677766654578899999998543211 23345668889998875
No 17
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.80 E-value=5.5e-18 Score=151.59 Aligned_cols=173 Identities=17% Similarity=0.182 Sum_probs=117.4
Q ss_pred CcEEEecCCCCCceEEEEeCCCCCCC-hhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc---h-hhHHHHHHHHhhhhhh
Q 043492 1 PLFIVFPDNQGKYEVILFFPGTSVSN-TSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK---E-VDAAAEEINWLPKGLQ 75 (278)
Q Consensus 1 p~~i~~P~~~~~~Pvvv~~hG~~~~~-~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~---~-~~~~~~~~~~l~~~l~ 75 (278)
|++++.|...++.|+||+.||+++.. ..|..+++.|+++||.|+++|++|+|.+.... + ......+++++..
T Consensus 182 ~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~--- 258 (414)
T PRK05077 182 TGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPN--- 258 (414)
T ss_pred EEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHh---
Confidence 35677887667899999999988765 46778899999999999999999987654321 1 1112345555322
Q ss_pred hcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC----CC------------C--
Q 043492 76 SHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH----SE------------L-- 137 (278)
Q Consensus 76 ~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~----~~------------~-- 137 (278)
...+|.++|+++|||+||.+|+.++...+. +++++|+++|.....+.. .. +
T Consensus 259 -----~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~------ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~ 327 (414)
T PRK05077 259 -----VPWVDHTRVAAFGFRFGANVAVRLAYLEPP------RLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRLGM 327 (414)
T ss_pred -----CcccCcccEEEEEEChHHHHHHHHHHhCCc------CceEEEEECCccchhhcchhhhhhchHHHHHHHHHHhCC
Confidence 233688999999999999999999988775 789999988765421110 00 0
Q ss_pred CCCc----------cc--c---CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCC
Q 043492 138 DPPI----------LD--Y---ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYY 197 (278)
Q Consensus 138 ~~~~----------~~--~---~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~ 197 (278)
.... +. . ...++++|+|+|+|++ |..+|.. ..+.+....... .+++++++
T Consensus 328 ~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~-------D~ivP~~--~a~~l~~~~~~~-~l~~i~~~ 392 (414)
T PRK05077 328 HDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKN-------DPFSPEE--DSRLIASSSADG-KLLEIPFK 392 (414)
T ss_pred CCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCC-------CCCCCHH--HHHHHHHhCCCC-eEEEccCC
Confidence 0000 00 0 0135889999999999 7788863 333444333334 67888886
No 18
>PRK10749 lysophospholipase L2; Provisional
Probab=99.80 E-value=3.6e-18 Score=149.01 Aligned_cols=108 Identities=19% Similarity=0.160 Sum_probs=79.7
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc------hhhHHHHHHHHhhhhhhhcCCccccCC
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK------EVDAAAEEINWLPKGLQSHLPENVVAD 85 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~------~~~~~~~~~~~l~~~l~~~~~~~~~~d 85 (278)
+.++||++||++.+...|..++..|+++||.|+++|++|+|.+.... ...+....++.+..-+.... ...+
T Consensus 53 ~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~ 129 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEI---QPGP 129 (330)
T ss_pred CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHH---hcCC
Confidence 45799999999999889999999999999999999999998664221 11233333333222122211 1135
Q ss_pred CCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
..++.++||||||.+++.++..++. +++++++++|..
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~~~p~------~v~~lvl~~p~~ 166 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQRHPG------VFDAIALCAPMF 166 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHHhCCC------CcceEEEECchh
Confidence 5799999999999999999998886 678888888864
No 19
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.79 E-value=2.8e-18 Score=160.90 Aligned_cols=200 Identities=19% Similarity=0.242 Sum_probs=135.5
Q ss_pred cEEEecCCC---CCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCCCCC-----------CCchhhHHHH
Q 043492 2 LFIVFPDNQ---GKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLMPPK-----------GNKEVDAAAE 65 (278)
Q Consensus 2 ~~i~~P~~~---~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----------~~~~~~~~~~ 65 (278)
.+++.|... +++|+||++||+..... .|....+.|++.||+|+.++++|++..+ +.....|+..
T Consensus 380 ~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~ 459 (620)
T COG1506 380 GWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIA 459 (620)
T ss_pred EEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHH
Confidence 467788643 34799999999975443 5788899999999999999999986532 1234455555
Q ss_pred HHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC-CCC----------C
Q 043492 66 EINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI-PYF----------H 134 (278)
Q Consensus 66 ~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~-~~~----------~ 134 (278)
.++++. ..+.+|.+|++++|||+||++++.++...+ .+++.++..+.... ... .
T Consensus 460 ~~~~l~--------~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-------~f~a~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (620)
T COG1506 460 AVDALV--------KLPLVDPERIGITGGSYGGYMTLLAATKTP-------RFKAAVAVAGGVDWLLYFGESTEGLRFDP 524 (620)
T ss_pred HHHHHH--------hCCCcChHHeEEeccChHHHHHHHHHhcCc-------hhheEEeccCcchhhhhccccchhhcCCH
Confidence 666542 256689999999999999999999999887 46777666553211 000 0
Q ss_pred --CCCCCC----ccc-----cCccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCc--ceeEEecCCCccc
Q 043492 135 --SELDPP----ILD-----YESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSD--RAHFDATYYGHMD 201 (278)
Q Consensus 135 --~~~~~~----~~~-----~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~--~~~~~~~g~~H~~ 201 (278)
....+. .+. ....++++|+|+|||++ |..+|.. +..++++.++... ..++++++.+|.
T Consensus 525 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~-------D~~v~~~-q~~~~~~aL~~~g~~~~~~~~p~e~H~- 595 (620)
T COG1506 525 EENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEE-------DDRVPIE-QAEQLVDALKRKGKPVELVVFPDEGHG- 595 (620)
T ss_pred HHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecC-------CccCChH-HHHHHHHHHHHcCceEEEEEeCCCCcC-
Confidence 000000 000 02257999999999999 5556653 4566777776433 289999999997
Q ss_pred cCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHHhcC
Q 043492 202 VLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAYFDS 248 (278)
Q Consensus 202 f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~l~~ 248 (278)
|.. ++...+ +-..++.||+.++++
T Consensus 596 ~~~----------------------~~~~~~-~~~~~~~~~~~~~~~ 619 (620)
T COG1506 596 FSR----------------------PENRVK-VLKEILDWFKRHLKQ 619 (620)
T ss_pred CCC----------------------chhHHH-HHHHHHHHHHHHhcC
Confidence 321 122223 335689999999875
No 20
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.78 E-value=1.8e-17 Score=147.99 Aligned_cols=108 Identities=20% Similarity=0.273 Sum_probs=78.1
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch-hhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE-VDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
++.|+|||+||++++...|...++.|+++ |.|+++|++|+|.+..... ..+.....+++.+++...++. ++.+++
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~---l~~~~~ 178 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA---KNLSNF 178 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH---cCCCCe
Confidence 35689999999999888888888999876 9999999999986653221 112223333333223322221 466799
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
.|+||||||.+|+.++..++. +++++++++|..
T Consensus 179 ~lvGhS~GG~la~~~a~~~p~------~v~~lvl~~p~~ 211 (402)
T PLN02894 179 ILLGHSFGGYVAAKYALKHPE------HVQHLILVGPAG 211 (402)
T ss_pred EEEEECHHHHHHHHHHHhCch------hhcEEEEECCcc
Confidence 999999999999999999886 677777776653
No 21
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=6.5e-17 Score=133.84 Aligned_cols=207 Identities=18% Similarity=0.182 Sum_probs=136.4
Q ss_pred CcEEEecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCC-CCCCCc-hhhHH----------HHHHH
Q 043492 1 PLFIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLM-PPKGNK-EVDAA----------AEEIN 68 (278)
Q Consensus 1 p~~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~-~~~~~~-~~~~~----------~~~~~ 68 (278)
++++++|...+++|+||++|+..|-...+..+++.||+.||+|++||..... .+.... ..... .+.+.
T Consensus 15 ~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (236)
T COG0412 15 PAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLA 94 (236)
T ss_pred eEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHH
Confidence 3577889888888999999999999999999999999999999999986632 111111 00000 11222
Q ss_pred HhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccC
Q 043492 69 WLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFN 148 (278)
Q Consensus 69 ~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 148 (278)
++...+.. +......+..+|+++|+||||.+++.++...+ ++++.+...|........ ...+
T Consensus 95 d~~a~~~~-L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-------~v~a~v~fyg~~~~~~~~----------~~~~ 156 (236)
T COG0412 95 DIDAALDY-LARQPQVDPKRIGVVGFCMGGGLALLAATRAP-------EVKAAVAFYGGLIADDTA----------DAPK 156 (236)
T ss_pred HHHHHHHH-HHhCCCCCCceEEEEEEcccHHHHHHhhcccC-------CccEEEEecCCCCCCccc----------cccc
Confidence 21111111 11123368899999999999999999998876 588999888765431110 1246
Q ss_pred CCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCC--cceeEEecCCCccccCCCCCcchhhhcccccccCCCCCC
Q 043492 149 FSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSS--DRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLP 226 (278)
Q Consensus 149 ~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~--~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~ 226 (278)
+++|+|++.++. |...|... ...+-+.+... ...+.+++++.|. |.+.... . . ...+
T Consensus 157 ~~~pvl~~~~~~-------D~~~p~~~-~~~~~~~~~~~~~~~~~~~y~ga~H~-F~~~~~~-~--~---------~~y~ 215 (236)
T COG0412 157 IKVPVLLHLAGE-------DPYIPAAD-VDALAAALEDAGVKVDLEIYPGAGHG-FANDRAD-Y--H---------PGYD 215 (236)
T ss_pred ccCcEEEEeccc-------CCCCChhH-HHHHHHHHHhcCCCeeEEEeCCCccc-cccCCCc-c--c---------ccCC
Confidence 899999999998 66766632 22233444333 2378889999997 6554310 0 0 0123
Q ss_pred chhHHHHhhHHHHHHHHHHhc
Q 043492 227 RQPMRQCVSGIAVAFLKAYFD 247 (278)
Q Consensus 227 ~~~~~~~~~~~~~afl~~~l~ 247 (278)
+.. .+.....+++||+.+|.
T Consensus 216 ~~a-a~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 216 AAA-AEDAWQRVLAFFKRLLG 235 (236)
T ss_pred HHH-HHHHHHHHHHHHHHhcc
Confidence 333 45567789999998875
No 22
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.78 E-value=3.9e-18 Score=134.48 Aligned_cols=159 Identities=18% Similarity=0.204 Sum_probs=113.6
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCC-------CchhhHHHHHHHHhhhhhhhcCCccccCCC
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKG-------NKEVDAAAEEINWLPKGLQSHLPENVVADL 86 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~ 86 (278)
-.|+++||+.|+....+.|++.|.++||.|.+|.++|+|.+.. .++..++.+..++| .. ...
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L----~~-------~gy 84 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDL----KE-------AGY 84 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHH----HH-------cCC
Confidence 6999999999999999999999999999999999999986541 11122222222222 11 245
Q ss_pred CceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCcccc----------------------
Q 043492 87 NYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDY---------------------- 144 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~---------------------- 144 (278)
+.|.++|-||||.+|+.+|...+ +++++.+++-...... ..+....+.+
T Consensus 85 ~eI~v~GlSmGGv~alkla~~~p--------~K~iv~m~a~~~~k~~-~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~ 155 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYHYP--------PKKIVPMCAPVNVKSW-RIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSY 155 (243)
T ss_pred CeEEEEeecchhHHHHHHHhhCC--------ccceeeecCCcccccc-hhhhHHHHHHHHHhhhccCCCHHHHHHHHHHh
Confidence 79999999999999999999876 5677777654432111 0010111000
Q ss_pred --------------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 145 --------------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 145 --------------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
+-..|..|+|++.|.+ |..+|.. ...-+|+...+..|.+.+++++||.
T Consensus 156 ~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~-------D~mv~~~-sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 156 KDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQ-------DEMVPAE-SANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred hcchHHHHHHHHHHHHHHHhhhhhcccchhheeccc-------CCCCCHH-HHHHHHHhccCCcceeEEEccCCce
Confidence 1146899999999999 6677763 3445788888877799999999997
No 23
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.77 E-value=3.1e-17 Score=140.84 Aligned_cols=102 Identities=11% Similarity=0.010 Sum_probs=77.8
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc-------hhhHHHHHHHHhhhhhhhcCCccccCC
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK-------EVDAAAEEINWLPKGLQSHLPENVVAD 85 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-------~~~~~~~~~~~l~~~l~~~~~~~~~~d 85 (278)
.|+|||+||++++...|..+++.|+++ |.|+++|++|+|.+.... ...++.+..+.+ ..+++. +.
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l----~~~l~~---l~ 100 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQL----NDFCSD---VV 100 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHH----HHHHHH---hc
Confidence 479999999999999999999999988 799999999998765321 112233333332 222222 34
Q ss_pred CCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
.+++.++||||||.+++.++..+|+ +++++++++|..
T Consensus 101 ~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~lili~~~~ 137 (294)
T PLN02824 101 GDPAFVICNSVGGVVGLQAAVDAPE------LVRGVMLINISL 137 (294)
T ss_pred CCCeEEEEeCHHHHHHHHHHHhChh------heeEEEEECCCc
Confidence 5799999999999999999999987 788888887643
No 24
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.77 E-value=6.4e-17 Score=139.45 Aligned_cols=102 Identities=23% Similarity=0.350 Sum_probs=78.1
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch--hhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE--VDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
..|+|||+||++++...|..+++.|++.||.|+++|++|+|.+..... ..+.....+++.+ +++. ++.+++
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~----~l~~---l~~~~v 117 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRS----WFEQ---LDLTDV 117 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHH----HHHH---cCCCCE
Confidence 467999999999999999999999999999999999999987653221 1223333343322 2221 456789
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
.++||||||.+|+.++..+++ ++++++++++
T Consensus 118 ~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~ 148 (302)
T PRK00870 118 TLVCQDWGGLIGLRLAAEHPD------RFARLVVANT 148 (302)
T ss_pred EEEEEChHHHHHHHHHHhChh------heeEEEEeCC
Confidence 999999999999999999886 6777777765
No 25
>PRK10162 acetyl esterase; Provisional
Probab=99.75 E-value=1.7e-16 Score=137.67 Aligned_cols=184 Identities=12% Similarity=0.098 Sum_probs=121.8
Q ss_pred CcEEEecCCCCCceEEEEeCCCC---CCChhHHHHHHHHHHc-CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhh
Q 043492 1 PLFIVFPDNQGKYEVILFFPGTS---VSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQS 76 (278)
Q Consensus 1 p~~i~~P~~~~~~Pvvv~~hG~~---~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (278)
|+.+|.|... +.|+|||+||++ ++...+..+++.|++. |+.|+++|++............|+..+++|+.+....
T Consensus 70 ~~~~y~P~~~-~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~ 148 (318)
T PRK10162 70 ETRLYYPQPD-SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAED 148 (318)
T ss_pred EEEEECCCCC-CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHH
Confidence 4678999643 569999999988 5666788899999984 9999999987654333344577888889997654332
Q ss_pred cCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCC---------CCC---------
Q 043492 77 HLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHS---------ELD--------- 138 (278)
Q Consensus 77 ~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~---------~~~--------- 138 (278)
..+|.++|+|+|||+||.+|+.++....+......+++++++++|+........ .+.
T Consensus 149 -----~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~ 223 (318)
T PRK10162 149 -----YGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWDGLTQQDLQMYEE 223 (318)
T ss_pred -----hCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCccccCHHHHHHHHH
Confidence 236788999999999999999998753221111126788999888764311100 000
Q ss_pred ----------CCccccCccCC---CCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCC--cceeEEecCCCcc
Q 043492 139 ----------PPILDYESFNF---SIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSS--DRAHFDATYYGHM 200 (278)
Q Consensus 139 ----------~~~~~~~~~~~---~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~--~~~~~~~~g~~H~ 200 (278)
.+.......++ -.|+++++|+. |...+. ...+.++++.. ..++.+++|..|.
T Consensus 224 ~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~-------D~L~de---~~~~~~~L~~aGv~v~~~~~~g~~H~ 290 (318)
T PRK10162 224 AYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEF-------DPLLDD---SRLLYQTLAAHQQPCEFKLYPGTLHA 290 (318)
T ss_pred HhCCCccccCCcccCcchhhhhcCCCCeEEEecCC-------CcCcCh---HHHHHHHHHHcCCCEEEEEECCCcee
Confidence 00000000123 26999999999 665543 34444554322 2288999999996
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.75 E-value=2.3e-17 Score=136.71 Aligned_cols=101 Identities=16% Similarity=0.136 Sum_probs=74.3
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
..|+||++||++.+...|..+++.|. .||.|+++|++|+|.+.......+.....+.+.+-++. ++.+++.+
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~-------~~~~~v~l 83 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH-------LGIERAVF 83 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCCceEE
Confidence 57899999999999999999999886 57999999999998654332222333333332221221 35578999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
+|||+||.+++.++..++. ++++++++++
T Consensus 84 iG~S~Gg~~a~~~a~~~p~------~v~~li~~~~ 112 (251)
T TIGR02427 84 CGLSLGGLIAQGLAARRPD------RVRALVLSNT 112 (251)
T ss_pred EEeCchHHHHHHHHHHCHH------HhHHHhhccC
Confidence 9999999999999998865 5666666654
No 27
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.75 E-value=7.4e-17 Score=137.25 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=76.5
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEE
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALM 92 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~ 92 (278)
.|.|||+||++++...|..+++.|+++ |.|+++|++|+|.+.......+.....+++ ..+++. ++.+++.|+
T Consensus 25 ~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~----~~~i~~---l~~~~~~Lv 96 (276)
T TIGR02240 25 LTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPRHPYRFPGLAKLA----ARMLDY---LDYGQVNAI 96 (276)
T ss_pred CCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCCCcCcHHHHHHHH----HHHHHH---hCcCceEEE
Confidence 468999999999999999999999875 999999999998765432222333333332 222222 456789999
Q ss_pred EeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 93 GHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 93 GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
||||||.+++.+|..+++ ++++++++++..
T Consensus 97 G~S~GG~va~~~a~~~p~------~v~~lvl~~~~~ 126 (276)
T TIGR02240 97 GVSWGGALAQQFAHDYPE------RCKKLILAATAA 126 (276)
T ss_pred EECHHHHHHHHHHHHCHH------HhhheEEeccCC
Confidence 999999999999999886 677777776543
No 28
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.74 E-value=5.5e-17 Score=136.42 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=74.7
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEE
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALM 92 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~ 92 (278)
.|.|||+||++++...|..+++.|.++ |.|+++|++|+|.+.... ..+..+..+.+ .. ...+++.++
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l----~~-------~~~~~~~lv 79 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG-ALSLADMAEAV----LQ-------QAPDKAIWL 79 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC-CCCHHHHHHHH----Hh-------cCCCCeEEE
Confidence 357999999999999999999999877 999999999998665322 22333333332 21 234689999
Q ss_pred EeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 93 GHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 93 GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
||||||.+|+.++...+. +++.++++++.
T Consensus 80 GhS~Gg~ia~~~a~~~p~------~v~~lili~~~ 108 (256)
T PRK10349 80 GWSLGGLVASQIALTHPE------RVQALVTVASS 108 (256)
T ss_pred EECHHHHHHHHHHHhChH------hhheEEEecCc
Confidence 999999999999998886 78888877653
No 29
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.74 E-value=3.3e-17 Score=134.16 Aligned_cols=174 Identities=22% Similarity=0.251 Sum_probs=113.7
Q ss_pred HHHHHHHHHHcCcEEEEeccCCCCCCC-----------CCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChh
Q 043492 29 YSKLFDHLASHGYIVVSPQLYNLMPPK-----------GNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRG 97 (278)
Q Consensus 29 ~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~G 97 (278)
|.+..+.|+++||+|+.+|++|++..+ ......|+.++++++.+ ...+|.+||+++|||+|
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~--------~~~iD~~ri~i~G~S~G 74 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIK--------QYYIDPDRIGIMGHSYG 74 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHH--------TTSEEEEEEEEEEETHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhc--------cccccceeEEEEccccc
Confidence 457788899999999999999986322 11234556666666533 23578999999999999
Q ss_pred HHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCC---CC-------CCc-cc---c-------CccC--CCCCeE
Q 043492 98 GLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSE---LD-------PPI-LD---Y-------ESFN--FSIPVT 154 (278)
Q Consensus 98 G~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~---~~-------~~~-~~---~-------~~~~--~~~P~L 154 (278)
|++++.++...++ .+++++..+|+......... +. +.. .. + ...+ +++|+|
T Consensus 75 G~~a~~~~~~~~~------~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~l 148 (213)
T PF00326_consen 75 GYLALLAATQHPD------RFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVL 148 (213)
T ss_dssp HHHHHHHHHHTCC------GSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEE
T ss_pred ccccchhhcccce------eeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEE
Confidence 9999999998876 78999998887654221100 00 000 00 0 1134 789999
Q ss_pred EEecCCCCCcCCCCCCCCccccHHHHHHHhcCC--cceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHH
Q 043492 155 VIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSS--DRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQ 232 (278)
Q Consensus 155 ii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~--~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (278)
+++|++ |..+|. .+..++++.++.. ...++++++++|. +. ....+.
T Consensus 149 i~hG~~-------D~~Vp~-~~s~~~~~~L~~~g~~~~~~~~p~~gH~-~~-----------------------~~~~~~ 196 (213)
T PF00326_consen 149 IIHGEN-------DPRVPP-SQSLRLYNALRKAGKPVELLIFPGEGHG-FG-----------------------NPENRR 196 (213)
T ss_dssp EEEETT-------BSSSTT-HHHHHHHHHHHHTTSSEEEEEETT-SSS-TT-----------------------SHHHHH
T ss_pred EEccCC-------CCccCH-HHHHHHHHHHHhcCCCEEEEEcCcCCCC-CC-----------------------CchhHH
Confidence 999999 777776 3455566666432 1389999999995 21 111223
Q ss_pred HhhHHHHHHHHHHhcC
Q 043492 233 CVSGIAVAFLKAYFDS 248 (278)
Q Consensus 233 ~~~~~~~afl~~~l~~ 248 (278)
.....+.+||+.+|++
T Consensus 197 ~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 197 DWYERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHcCC
Confidence 5567899999999986
No 30
>PLN02442 S-formylglutathione hydrolase
Probab=99.73 E-value=1.3e-16 Score=136.17 Aligned_cols=186 Identities=17% Similarity=0.215 Sum_probs=112.7
Q ss_pred CcEEEecCC--CCCceEEEEeCCCCCCChhHH---HHHHHHHHcCcEEEEeccCCCCCC--C---------CCc----hh
Q 043492 1 PLFIVFPDN--QGKYEVILFFPGTSVSNTSYS---KLFDHLASHGYIVVSPQLYNLMPP--K---------GNK----EV 60 (278)
Q Consensus 1 p~~i~~P~~--~~~~Pvvv~~hG~~~~~~~~~---~l~~~Las~Gy~Vv~~d~~~~~~~--~---------~~~----~~ 60 (278)
++.||.|.. .+++|+|+|+||++++...+. .+.+.++.+||+|+.+|..+.+.. . ... ..
T Consensus 33 ~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 112 (283)
T PLN02442 33 TFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNAT 112 (283)
T ss_pred EEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccc
Confidence 357888973 357999999999998887653 355778889999999997543210 0 000 00
Q ss_pred -hH--HHHHHHHhhhhhhhcCCc-cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCC---
Q 043492 61 -DA--AAEEINWLPKGLQSHLPE-NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYF--- 133 (278)
Q Consensus 61 -~~--~~~~~~~l~~~l~~~~~~-~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~--- 133 (278)
.. ....++++.+.+...+.. ...+|.++++++||||||.+|+.++.++++ +++++++++|.......
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~------~~~~~~~~~~~~~~~~~~~~ 186 (283)
T PLN02442 113 QEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD------KYKSVSAFAPIANPINCPWG 186 (283)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch------hEEEEEEECCccCcccCchh
Confidence 00 001122222212111111 123688899999999999999999999887 78888888887542110
Q ss_pred C----CCCC--CCc---ccc-----CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHh---cCCcceeEEecC
Q 043492 134 H----SELD--PPI---LDY-----ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRC---TSSDRAHFDATY 196 (278)
Q Consensus 134 ~----~~~~--~~~---~~~-----~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~---~~~~~~~~~~~g 196 (278)
. ..+. ... ... ...+.++|+|+++|+. |...+.......+++.+ ..+. .+.+++|
T Consensus 187 ~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~-------D~~v~~~~~s~~~~~~l~~~g~~~-~~~~~pg 258 (283)
T PLN02442 187 QKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEA-------DKFLKEQLLPENFEEACKEAGAPV-TLRLQPG 258 (283)
T ss_pred hHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCC-------CccccccccHHHHHHHHHHcCCCe-EEEEeCC
Confidence 0 0000 000 000 1124689999999999 66666422233444443 3343 7888999
Q ss_pred CCcc
Q 043492 197 YGHM 200 (278)
Q Consensus 197 ~~H~ 200 (278)
.+|.
T Consensus 259 ~~H~ 262 (283)
T PLN02442 259 YDHS 262 (283)
T ss_pred CCcc
Confidence 9996
No 31
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.73 E-value=3.7e-16 Score=132.41 Aligned_cols=101 Identities=23% Similarity=0.253 Sum_probs=73.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch-hhHHHHHHHHhhhhhhhcCCccccCCCCceE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE-VDAAAEEINWLPKGLQSHLPENVVADLNYSA 90 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~ 90 (278)
..|+|||+||++++...|..+.+.|++ +|.|+++|++|+|.+..... ..++....+.+..-++. ++.+++.
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~-------~~~~~~~ 98 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA-------EGLSPDG 98 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH-------cCCCCce
Confidence 468999999999999999999999987 49999999999986543221 22333333332221211 3456889
Q ss_pred EEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc
Q 043492 91 LMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 91 l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
|+||||||.+++.++...+. ++++++++++
T Consensus 99 lvG~S~Gg~~a~~~a~~~p~------~v~~~v~~~~ 128 (278)
T TIGR03056 99 VIGHSAGAAIALRLALDGPV------TPRMVVGINA 128 (278)
T ss_pred EEEECccHHHHHHHHHhCCc------ccceEEEEcC
Confidence 99999999999999998876 5666666554
No 32
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.73 E-value=1.4e-16 Score=132.95 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=75.2
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc-hhhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK-EVDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
.+.|+||++||++++...|..+++.|.+ ||.|+++|++|+|.+.... ...+..+..+.+.+-++. ++..++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~-------~~~~~~ 82 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA-------LNIERF 82 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-------hCCCcE
Confidence 3568999999999999999999988876 5999999999998665321 112233333332221211 356789
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
.++||||||.+++.++...++ ++++++.++++.
T Consensus 83 ~l~G~S~Gg~~a~~~a~~~~~------~v~~~i~~~~~~ 115 (257)
T TIGR03611 83 HFVGHALGGLIGLQLALRYPE------RLLSLVLINAWS 115 (257)
T ss_pred EEEEechhHHHHHHHHHHChH------HhHHheeecCCC
Confidence 999999999999999998875 577777766543
No 33
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.73 E-value=2.4e-16 Score=135.32 Aligned_cols=102 Identities=20% Similarity=0.329 Sum_probs=77.8
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceE
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSA 90 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~ 90 (278)
++.|.|||+||++++...|..+++.|++.+ .|+++|++|+|.+.......+.....+++. .+++. ++.+++.
T Consensus 25 G~g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~----~ll~~---l~~~~~~ 96 (295)
T PRK03592 25 GEGDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLD----AWFDA---LGLDDVV 96 (295)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHH----HHHHH---hCCCCeE
Confidence 345799999999999999999999999995 999999999987654322222333333322 22221 3557999
Q ss_pred EEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc
Q 043492 91 LMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 91 l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
++|||+||.+|+.++..+|+ ++++++++++
T Consensus 97 lvGhS~Gg~ia~~~a~~~p~------~v~~lil~~~ 126 (295)
T PRK03592 97 LVGHDWGSALGFDWAARHPD------RVRGIAFMEA 126 (295)
T ss_pred EEEECHHHHHHHHHHHhChh------heeEEEEECC
Confidence 99999999999999999997 7888888775
No 34
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.73 E-value=2.8e-16 Score=133.77 Aligned_cols=103 Identities=19% Similarity=0.305 Sum_probs=73.2
Q ss_pred CCceEEEEeCCCCCCChhHHH---HHHHHHHcCcEEEEeccCCCCCCCCCc--hhhHHHHHHHHhhhhhhhcCCccccCC
Q 043492 11 GKYEVILFFPGTSVSNTSYSK---LFDHLASHGYIVVSPQLYNLMPPKGNK--EVDAAAEEINWLPKGLQSHLPENVVAD 85 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~---l~~~Las~Gy~Vv~~d~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~d 85 (278)
+..|.||++||++++...|.. .+..+++.||.|+++|++|+|.+.... ..... ...+. +.++++. ++
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~-~~~~~----l~~~l~~---l~ 99 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGL-VNARA----VKGLMDA---LD 99 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccc-hhHHH----HHHHHHH---cC
Confidence 345789999999988766653 356677889999999999998765321 11111 11111 2222222 56
Q ss_pred CCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
.+++.++||||||.+++.++..+++ +++++++++|.
T Consensus 100 ~~~~~lvG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~ 135 (282)
T TIGR03343 100 IEKAHLVGNSMGGATALNFALEYPD------RIGKLILMGPG 135 (282)
T ss_pred CCCeeEEEECchHHHHHHHHHhChH------hhceEEEECCC
Confidence 7899999999999999999999886 78888887764
No 35
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.72 E-value=4.9e-16 Score=130.30 Aligned_cols=104 Identities=18% Similarity=0.184 Sum_probs=78.8
Q ss_pred cCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCC
Q 043492 7 PDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADL 86 (278)
Q Consensus 7 P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~ 86 (278)
|......|+|||+||++++...|..+++.|++. |.|+++|++|+|.+..... .+..+..+++.+-++. ++.
T Consensus 10 ~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~-------l~~ 80 (255)
T PRK10673 10 AQNPHNNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDA-------LQI 80 (255)
T ss_pred CCCCCCCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHH-------cCC
Confidence 455567799999999999999999999999875 9999999999986553222 2333333333222222 355
Q ss_pred CceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 87 NYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
+++.++||||||.+|+.++...++ +++++++++
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~~~------~v~~lvli~ 113 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTALAPD------RIDKLVAID 113 (255)
T ss_pred CceEEEEECHHHHHHHHHHHhCHh------hcceEEEEe
Confidence 689999999999999999998886 688888765
No 36
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.72 E-value=2.1e-16 Score=134.47 Aligned_cols=185 Identities=16% Similarity=0.194 Sum_probs=111.6
Q ss_pred cEEEecCC--CCCceEEEEeCCCCCCChhHHHH---HHHHHHcCcEEEEecc--CCCCCCCC---------Cc-------
Q 043492 2 LFIVFPDN--QGKYEVILFFPGTSVSNTSYSKL---FDHLASHGYIVVSPQL--YNLMPPKG---------NK------- 58 (278)
Q Consensus 2 ~~i~~P~~--~~~~Pvvv~~hG~~~~~~~~~~l---~~~Las~Gy~Vv~~d~--~~~~~~~~---------~~------- 58 (278)
..||.|+. .++.|+|+++||++++...|... .+.++++||.|++||. +|.+.+.. ..
T Consensus 29 ~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~ 108 (275)
T TIGR02821 29 FGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATE 108 (275)
T ss_pred EEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCc
Confidence 56888974 45789999999999988777543 2444567999999997 33322110 00
Q ss_pred hh-hHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCC--
Q 043492 59 EV-DAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHS-- 135 (278)
Q Consensus 59 ~~-~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~-- 135 (278)
.. .......+++.+++...++....+|.++++++||||||.+|+.++..+++ .++++++++|+........
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~------~~~~~~~~~~~~~~~~~~~~~ 182 (275)
T TIGR02821 109 EPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD------RFKSVSAFAPIVAPSRCPWGQ 182 (275)
T ss_pred CcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc------cceEEEEECCccCcccCcchH
Confidence 00 00001122222233333333334688899999999999999999999887 6888998888754321100
Q ss_pred -----CC--CCCcc---cc----CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhc---CCcceeEEecCCC
Q 043492 136 -----EL--DPPIL---DY----ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCT---SSDRAHFDATYYG 198 (278)
Q Consensus 136 -----~~--~~~~~---~~----~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~---~~~~~~~~~~g~~ 198 (278)
.+ .+... +. .......|+++.+|+. |...+.......+.+.++ .+. ++.+++|++
T Consensus 183 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~-------D~~v~~~~~~~~~~~~l~~~g~~v-~~~~~~g~~ 254 (275)
T TIGR02821 183 KAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTA-------DQFLDEQLRPDAFEQACRAAGQAL-TLRRQAGYD 254 (275)
T ss_pred HHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCC-------CcccCccccHHHHHHHHHHcCCCe-EEEEeCCCC
Confidence 00 00000 00 0113457888889998 666665222233444443 333 778889999
Q ss_pred cc
Q 043492 199 HM 200 (278)
Q Consensus 199 H~ 200 (278)
|.
T Consensus 255 H~ 256 (275)
T TIGR02821 255 HS 256 (275)
T ss_pred cc
Confidence 96
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.72 E-value=2.1e-16 Score=130.62 Aligned_cols=102 Identities=19% Similarity=0.180 Sum_probs=77.9
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc--hhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK--EVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
|+||++||++++...|..+++.|+ .||.|+++|++|++.+.... ...+..+.++++...+.. .++.+++.+
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l 74 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLD------QLGIEPFFL 74 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHH------HcCCCeEEE
Confidence 789999999999999999999999 89999999999988665322 233444555442111211 135679999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
+|||+||.+|+.++..+++ ++++++++++..
T Consensus 75 ~G~S~Gg~ia~~~a~~~~~------~v~~lil~~~~~ 105 (251)
T TIGR03695 75 VGYSMGGRIALYYALQYPE------RVQGLILESGSP 105 (251)
T ss_pred EEeccHHHHHHHHHHhCch------heeeeEEecCCC
Confidence 9999999999999999886 677787777643
No 38
>PLN02965 Probable pheophorbidase
Probab=99.72 E-value=3.3e-16 Score=131.74 Aligned_cols=100 Identities=20% Similarity=0.172 Sum_probs=76.2
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc-hhhHHHHHHHHhhhhhhhcCCccccCCC-CceEEE
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK-EVDAAAEEINWLPKGLQSHLPENVVADL-NYSALM 92 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~d~-~~i~l~ 92 (278)
.|||+||++.+...|..+++.|++.||.|+++|++|+|.+.... ...+.....+++.+ +++. ++. .++.++
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~----~l~~---l~~~~~~~lv 77 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFA----LLSD---LPPDHKVILV 77 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHH----HHHh---cCCCCCEEEE
Confidence 49999999999999999999999999999999999998665322 12334444444332 2222 333 499999
Q ss_pred EeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 93 GHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 93 GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
||||||.+++.++.+++. +++.++++++.
T Consensus 78 GhSmGG~ia~~~a~~~p~------~v~~lvl~~~~ 106 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTD------KISMAIYVAAA 106 (255)
T ss_pred ecCcchHHHHHHHHhCch------heeEEEEEccc
Confidence 999999999999998886 67777776654
No 39
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.71 E-value=5.5e-16 Score=137.19 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=81.1
Q ss_pred EecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccC
Q 043492 5 VFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVA 84 (278)
Q Consensus 5 ~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 84 (278)
|.+...++.|+|||+||++++...|..+.+.|+.. |.|+++|++|++.+.......+...+.+.+..-+. .+
T Consensus 123 ~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~-------~~ 194 (371)
T PRK14875 123 YLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLD-------AL 194 (371)
T ss_pred EecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH-------hc
Confidence 33433345689999999999999999999999876 99999999999866433222334444444322121 14
Q ss_pred CCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
+.+++.++|||+||.+++.++..++. +++++++++|.
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~~~------~v~~lv~~~~~ 231 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARAPQ------RVASLTLIAPA 231 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhCch------heeEEEEECcC
Confidence 66789999999999999999988875 68888888765
No 40
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.70 E-value=1.7e-15 Score=133.65 Aligned_cols=102 Identities=18% Similarity=0.142 Sum_probs=74.9
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc-hhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK-EVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
.|.|||+||++++...|..++..|++ +|.|+++|++|+|.+.... ...+.....+++.+ +++. ++.+++.|
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~----~l~~---l~~~~~~l 159 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILD----FLEE---VVQKPTVL 159 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHH----HHHH---hcCCCeEE
Confidence 47899999999999999999999987 6999999999998765332 12233333333222 2221 35579999
Q ss_pred EEeChhHHHHHHHHhh-CCCCCCCCcccceEEecCcCC
Q 043492 92 MGHSRGGLTAFALAQG-YATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~-~~~~~~~~~~~~a~v~~~p~~ 128 (278)
+||||||.+++.++.. +|+ ++++++++++..
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~------rV~~LVLi~~~~ 191 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRD------LVRGLVLLNCAG 191 (360)
T ss_pred EEECHHHHHHHHHHHhcChh------hcCEEEEECCcc
Confidence 9999999999988764 565 688888877643
No 41
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.69 E-value=1.7e-15 Score=123.94 Aligned_cols=113 Identities=19% Similarity=0.313 Sum_probs=82.9
Q ss_pred cEEEecCC-CCCceEEEEeCCCCCCChhHH---HHHHHHHHcCcEEEEeccCCCCCCC-------------CCchhhHHH
Q 043492 2 LFIVFPDN-QGKYEVILFFPGTSVSNTSYS---KLFDHLASHGYIVVSPQLYNLMPPK-------------GNKEVDAAA 64 (278)
Q Consensus 2 ~~i~~P~~-~~~~Pvvv~~hG~~~~~~~~~---~l~~~Las~Gy~Vv~~d~~~~~~~~-------------~~~~~~~~~ 64 (278)
.++|.|.+ .++.|+||++||++++...+. .+.+.+.++||+|++||+++.+... ......++.
T Consensus 1 ~~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T TIGR01840 1 MYVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLH 80 (212)
T ss_pred CEEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHH
Confidence 36899975 468999999999998877665 3566666789999999998764211 011233444
Q ss_pred HHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 65 EEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 65 ~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
.+++++.+ ...+|.++|.|+|||+||.+++.++..+++ .+.+++.+++..
T Consensus 81 ~~i~~~~~--------~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~------~~~~~~~~~g~~ 130 (212)
T TIGR01840 81 QLIDAVKA--------NYSIDPNRVYVTGLSAGGGMTAVLGCTYPD------VFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHH--------hcCcChhheEEEEECHHHHHHHHHHHhCch------hheEEEeecCCc
Confidence 55555432 234788999999999999999999999886 677887776543
No 42
>PRK10985 putative hydrolase; Provisional
Probab=99.69 E-value=1e-15 Score=133.28 Aligned_cols=103 Identities=19% Similarity=0.185 Sum_probs=72.7
Q ss_pred CCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCCCCCC-------CchhhHHHHHHHHhhhhhhhcCCcc
Q 043492 11 GKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLMPPKG-------NKEVDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
.+.|+||++||++++.. .+..+++.|+++||.|+++|++|++.... .....|+..+++++.+.
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~-------- 127 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQRE-------- 127 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHh--------
Confidence 45789999999987644 34668999999999999999999864321 12345666666665331
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
....++.++||||||.+++.++...... .++++++.+++.
T Consensus 128 --~~~~~~~~vG~S~GG~i~~~~~~~~~~~----~~~~~~v~i~~p 167 (324)
T PRK10985 128 --FGHVPTAAVGYSLGGNMLACLLAKEGDD----LPLDAAVIVSAP 167 (324)
T ss_pred --CCCCCEEEEEecchHHHHHHHHHhhCCC----CCccEEEEEcCC
Confidence 2346899999999999888877765431 135565555543
No 43
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.68 E-value=4e-15 Score=125.96 Aligned_cols=104 Identities=18% Similarity=0.181 Sum_probs=70.7
Q ss_pred CCceEEEEeCCCCCCChh-HHHHHHHHHHcCcEEEEeccCCCCCCCCCch---hhHHHHHHHHhhhhhhhcCCccccCCC
Q 043492 11 GKYEVILFFPGTSVSNTS-YSKLFDHLASHGYIVVSPQLYNLMPPKGNKE---VDAAAEEINWLPKGLQSHLPENVVADL 86 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~-~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~d~ 86 (278)
++.|.|||+||+.++... +..+...+.+.||.|+++|++|++.+..... ..+.....+.+ ..+++. ++.
T Consensus 23 ~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~ 95 (288)
T TIGR01250 23 GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDEL----EEVREK---LGL 95 (288)
T ss_pred CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHH----HHHHHH---cCC
Confidence 346789999998765544 4556666666699999999999876543211 12233333332 222211 355
Q ss_pred CceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 87 NYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
+++.++||||||.+++.++...+. ++++++++++.
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~ 130 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKYGQ------HLKGLIISSML 130 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhCcc------ccceeeEeccc
Confidence 679999999999999999998886 67777766654
No 44
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.68 E-value=2.4e-16 Score=128.34 Aligned_cols=165 Identities=22% Similarity=0.254 Sum_probs=110.2
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc--hhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEE
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK--EVDAAAEEINWLPKGLQSHLPENVVADLNYSALMG 93 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~G 93 (278)
|||+||++++...|..+++.|+ +||.|+++|++|++.+.... ...+..+..+.+.+-++. ++.+++.++|
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~-------~~~~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA-------LGIKKVILVG 72 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH-------TTTSSEEEEE
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc-------cccccccccc
Confidence 7999999999999999999995 89999999999988665322 122333333332221222 3447999999
Q ss_pred eChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC-----CCCCCC----------------------------
Q 043492 94 HSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH-----SELDPP---------------------------- 140 (278)
Q Consensus 94 hS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~-----~~~~~~---------------------------- 140 (278)
||+||.+++.++..+++ +++++++++|........ ..+...
T Consensus 73 ~S~Gg~~a~~~a~~~p~------~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPD------RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPED 146 (228)
T ss_dssp ETHHHHHHHHHHHHSGG------GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred ccccccccccccccccc------ccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccc
Confidence 99999999999999887 899999999887421000 000000
Q ss_pred cc---------------cc-----CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 141 IL---------------DY-----ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 141 ~~---------------~~-----~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
.. .. ...++++|+++++|+. |...+. +..+.+....... .+++++++||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~-------D~~~~~--~~~~~~~~~~~~~-~~~~~~~~gH~ 216 (228)
T PF12697_consen 147 LIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGED-------DPIVPP--ESAEELADKLPNA-ELVVIPGAGHF 216 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETT-------SSSSHH--HHHHHHHHHSTTE-EEEEETTSSST
T ss_pred cccccccccccccccccccccccccccccCCCeEEeecCC-------CCCCCH--HHHHHHHHHCCCC-EEEEECCCCCc
Confidence 00 00 1146899999999999 666653 2333333222233 78999999999
Q ss_pred ccCC
Q 043492 201 DVLD 204 (278)
Q Consensus 201 ~f~d 204 (278)
-+.+
T Consensus 217 ~~~~ 220 (228)
T PF12697_consen 217 LFLE 220 (228)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 6654
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.68 E-value=1.1e-15 Score=126.23 Aligned_cols=95 Identities=18% Similarity=0.211 Sum_probs=72.7
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEE
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMG 93 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~G 93 (278)
|.|||+||++++...|..+++.|++ +|.|+++|++|++.+.... ..+..++.+.+ ...+ .+++.++|
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~----~~~~-------~~~~~lvG 71 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG-PLSLADAAEAI----AAQA-------PDPAIWLG 71 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC-CcCHHHHHHHH----HHhC-------CCCeEEEE
Confidence 7899999999999999999999976 5999999999998754322 22344444432 2211 25899999
Q ss_pred eChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 94 HSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 94 hS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
|||||.+++.++..+++ ++++++++++.
T Consensus 72 ~S~Gg~~a~~~a~~~p~------~v~~~il~~~~ 99 (245)
T TIGR01738 72 WSLGGLVALHIAATHPD------RVRALVTVASS 99 (245)
T ss_pred EcHHHHHHHHHHHHCHH------hhheeeEecCC
Confidence 99999999999998886 57777776554
No 46
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.68 E-value=4.8e-16 Score=130.91 Aligned_cols=111 Identities=19% Similarity=0.149 Sum_probs=82.1
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceE
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSA 90 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~ 90 (278)
.....+|++||+|+....|..-.+.|++ ...|.++|.+|.|.+.......+......|+.+.++..- ...+.++..
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR---~~~~L~Kmi 163 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWR---KKMGLEKMI 163 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHH---HHcCCccee
Confidence 4566899999999988888888888888 699999999999876543322222222222222222111 114667999
Q ss_pred EEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCC
Q 043492 91 LMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIP 131 (278)
Q Consensus 91 l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~ 131 (278)
|+|||+||++|..+|.++|+ +++.+++.+||+...
T Consensus 164 lvGHSfGGYLaa~YAlKyPe------rV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 164 LVGHSFGGYLAAKYALKYPE------RVEKLILVSPWGFPE 198 (365)
T ss_pred EeeccchHHHHHHHHHhChH------hhceEEEeccccccc
Confidence 99999999999999999998 899999999998653
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.67 E-value=6e-15 Score=125.44 Aligned_cols=110 Identities=17% Similarity=0.201 Sum_probs=74.0
Q ss_pred EEEecCCCCCceEEEEeCCCC----CCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc-h----hhHHHHHHHHhhhh
Q 043492 3 FIVFPDNQGKYEVILFFPGTS----VSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK-E----VDAAAEEINWLPKG 73 (278)
Q Consensus 3 ~i~~P~~~~~~Pvvv~~hG~~----~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-~----~~~~~~~~~~l~~~ 73 (278)
.++.|.+..+. .||++||+. ++...+..+++.|+++||.|+++|++|++.+.... . ..++..+++++.+.
T Consensus 17 ~~~~p~~~~~~-~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~ 95 (274)
T TIGR03100 17 VLHIPGASHTT-GVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREA 95 (274)
T ss_pred EEEcCCCCCCC-eEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 45667654444 455555544 23345678899999999999999999998654321 1 12334444443211
Q ss_pred hhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 74 LQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 74 l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
. .+.++|.++|||+||.+++.++...+ +++++++++|+..
T Consensus 96 ----~-----~g~~~i~l~G~S~Gg~~a~~~a~~~~-------~v~~lil~~p~~~ 135 (274)
T TIGR03100 96 ----A-----PHLRRIVAWGLCDAASAALLYAPADL-------RVAGLVLLNPWVR 135 (274)
T ss_pred ----C-----CCCCcEEEEEECHHHHHHHHHhhhCC-------CccEEEEECCccC
Confidence 0 13468999999999999999876543 6889999998853
No 48
>PRK11460 putative hydrolase; Provisional
Probab=99.67 E-value=3.9e-15 Score=123.39 Aligned_cols=167 Identities=14% Similarity=0.091 Sum_probs=105.1
Q ss_pred cCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCc--EEEEeccCCCCC-C-C----------CCchhhHHHHHHHHhhh
Q 043492 7 PDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGY--IVVSPQLYNLMP-P-K----------GNKEVDAAAEEINWLPK 72 (278)
Q Consensus 7 P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy--~Vv~~d~~~~~~-~-~----------~~~~~~~~~~~~~~l~~ 72 (278)
+......|+||++||++++...+..+++.|+..++ .++.++-+.... . . ......++...++.+.+
T Consensus 10 ~~~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 10 SPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 33355679999999999999999999999998764 455555332100 0 0 01112223333333322
Q ss_pred hhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCC
Q 043492 73 GLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIP 152 (278)
Q Consensus 73 ~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P 152 (278)
.++.... ...++.++|+++|||+||.+++.++...++ .+.+++.+++.... + + ......+|
T Consensus 90 ~i~~~~~-~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~------~~~~vv~~sg~~~~------~-~-----~~~~~~~p 150 (232)
T PRK11460 90 TVRYWQQ-QSGVGASATALIGFSQGAIMALEAVKAEPG------LAGRVIAFSGRYAS------L-P-----ETAPTATT 150 (232)
T ss_pred HHHHHHH-hcCCChhhEEEEEECHHHHHHHHHHHhCCC------cceEEEEecccccc------c-c-----ccccCCCc
Confidence 2222221 234677899999999999999999987775 45667776653211 1 0 01235789
Q ss_pred eEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCC--cceeEEecCCCcc
Q 043492 153 VTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSS--DRAHFDATYYGHM 200 (278)
Q Consensus 153 ~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~--~~~~~~~~g~~H~ 200 (278)
+|+++|++ |..+|... ..+..+.++.. ...+.++++++|.
T Consensus 151 vli~hG~~-------D~vvp~~~-~~~~~~~L~~~g~~~~~~~~~~~gH~ 192 (232)
T PRK11460 151 IHLIHGGE-------DPVIDVAH-AVAAQEALISLGGDVTLDIVEDLGHA 192 (232)
T ss_pred EEEEecCC-------CCccCHHH-HHHHHHHHHHCCCCeEEEEECCCCCC
Confidence 99999999 77777632 34455555432 2266778999997
No 49
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.67 E-value=6.4e-15 Score=125.18 Aligned_cols=105 Identities=21% Similarity=0.175 Sum_probs=75.6
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc-hhhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK-EVDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
++.|.|||+||++.+...|..+++.|++.||.|+++|++|++.+.... ...++....+.+.+-+... . +.+++
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l----~--~~~~v 89 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL----P--ENEKV 89 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc----C--CCCCE
Confidence 456899999999999999999999999999999999999987542211 1122333333322212221 0 23699
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
.|+||||||.++..++..+++ +++.++.+++.
T Consensus 90 ~lvGhS~GG~v~~~~a~~~p~------~v~~lv~~~~~ 121 (273)
T PLN02211 90 ILVGHSAGGLSVTQAIHRFPK------KICLAVYVAAT 121 (273)
T ss_pred EEEEECchHHHHHHHHHhChh------heeEEEEeccc
Confidence 999999999999999988776 56777776553
No 50
>PLN02578 hydrolase
Probab=99.67 E-value=6.4e-15 Score=129.80 Aligned_cols=102 Identities=19% Similarity=0.154 Sum_probs=75.3
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
+.|.||++||++++...|..++..|++. |.|+++|++|+|.+.......+.....+++.+-++. +..+++.+
T Consensus 85 ~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~-------~~~~~~~l 156 (354)
T PLN02578 85 EGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKE-------VVKEPAVL 156 (354)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHH-------hccCCeEE
Confidence 4467899999999999999999999865 999999999998766432222233222332221222 23468999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
+|||+||.+++.++..+++ ++++++++++.
T Consensus 157 vG~S~Gg~ia~~~A~~~p~------~v~~lvLv~~~ 186 (354)
T PLN02578 157 VGNSLGGFTALSTAVGYPE------LVAGVALLNSA 186 (354)
T ss_pred EEECHHHHHHHHHHHhChH------hcceEEEECCC
Confidence 9999999999999999987 78888877654
No 51
>PLN02511 hydrolase
Probab=99.67 E-value=2.4e-15 Score=133.92 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=73.4
Q ss_pred CCceEEEEeCCCCCCChh-H-HHHHHHHHHcCcEEEEeccCCCCCCCC-------CchhhHHHHHHHHhhhhhhhcCCcc
Q 043492 11 GKYEVILFFPGTSVSNTS-Y-SKLFDHLASHGYIVVSPQLYNLMPPKG-------NKEVDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~-~-~~l~~~Las~Gy~Vv~~d~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
...|+||++||++++... | ..++..+.+.||.|+++|++|++.+.. .....|+.++++++...
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~-------- 169 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGR-------- 169 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHH--------
Confidence 356899999999876543 4 568888889999999999999876442 13355666777765321
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
....++.++||||||.+++.++...++. ..++++++++
T Consensus 170 --~~~~~~~lvG~SlGg~i~~~yl~~~~~~----~~v~~~v~is 207 (388)
T PLN02511 170 --YPSANLYAAGWSLGANILVNYLGEEGEN----CPLSGAVSLC 207 (388)
T ss_pred --CCCCCEEEEEechhHHHHHHHHHhcCCC----CCceEEEEEC
Confidence 2235899999999999999999887752 1255555544
No 52
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.66 E-value=5.1e-15 Score=126.66 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=74.8
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch-hhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE-VDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
++.|.|||+||++.+...|..+++.|.++ |.|+++|++|+|.+..... ..+.....+.+.. +++. ++.+++
T Consensus 32 G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~ 103 (286)
T PRK03204 32 GTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGE----FVDH---LGLDRY 103 (286)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHHHHHH----HHHH---hCCCCE
Confidence 34588999999998888899999999765 9999999999986653221 1222222332211 1111 456789
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
.++||||||.+++.++..++. ++++++++++.
T Consensus 104 ~lvG~S~Gg~va~~~a~~~p~------~v~~lvl~~~~ 135 (286)
T PRK03204 104 LSMGQDWGGPISMAVAVERAD------RVRGVVLGNTW 135 (286)
T ss_pred EEEEECccHHHHHHHHHhChh------heeEEEEECcc
Confidence 999999999999999998886 78888876653
No 53
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.66 E-value=4.7e-15 Score=129.38 Aligned_cols=189 Identities=13% Similarity=0.148 Sum_probs=112.0
Q ss_pred EecCCCCCceEEEEeCCCCCCCh-h---------------------H----HHHHHHHHHcCcEEEEeccCCCCCCCCC-
Q 043492 5 VFPDNQGKYEVILFFPGTSVSNT-S---------------------Y----SKLFDHLASHGYIVVSPQLYNLMPPKGN- 57 (278)
Q Consensus 5 ~~P~~~~~~Pvvv~~hG~~~~~~-~---------------------~----~~l~~~Las~Gy~Vv~~d~~~~~~~~~~- 57 (278)
|.|. .+..+|+++||++.... . | ..+++.|++.||.|+++|++|+|.+...
T Consensus 15 ~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~ 92 (332)
T TIGR01607 15 WIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQ 92 (332)
T ss_pred eecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCcccc
Confidence 4454 46679999999997765 1 1 5789999999999999999999865532
Q ss_pred ---chhhHHHHHHHHhhhhhhhcCC------------cc-----ccCCCCceEEEEeChhHHHHHHHHhhCCCCCC--CC
Q 043492 58 ---KEVDAAAEEINWLPKGLQSHLP------------EN-----VVADLNYSALMGHSRGGLTAFALAQGYATNPP--LG 115 (278)
Q Consensus 58 ---~~~~~~~~~~~~l~~~l~~~~~------------~~-----~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~--~~ 115 (278)
....+....++.+..-++.+.. .. ......++.|+||||||.+++.++...+.... ..
T Consensus 93 ~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~ 172 (332)
T TIGR01607 93 NLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDK 172 (332)
T ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccc
Confidence 1122333333333222221100 00 00013479999999999999998865432110 01
Q ss_pred cccceEEecCcCCCCCC-----------------------------CC-CCCC------------CCccc----c-----
Q 043492 116 LKFSALVGVDPVAGIPY-----------------------------FH-SELD------------PPILD----Y----- 144 (278)
Q Consensus 116 ~~~~a~v~~~p~~~~~~-----------------------------~~-~~~~------------~~~~~----~----- 144 (278)
..++++++++|...... .. ..+. +.... .
T Consensus 173 ~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~ 252 (332)
T TIGR01607 173 LNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASE 252 (332)
T ss_pred cccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCccccCCcccHHHHHH
Confidence 24677777666532100 00 0000 00000 0
Q ss_pred ----------CccCC--CCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccC
Q 043492 145 ----------ESFNF--SIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVL 203 (278)
Q Consensus 145 ----------~~~~~--~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~ 203 (278)
....+ ++|+|+++|+. |.+++.. ....+++.+..+.+.+.+++|++|.-+.
T Consensus 253 l~~~~~~~~~~~~~i~~~~P~Lii~G~~-------D~vv~~~-~~~~~~~~~~~~~~~l~~~~g~~H~i~~ 315 (332)
T TIGR01607 253 LIKATDTLDCDIDYIPKDIPILFIHSKG-------DCVCSYE-GTVSFYNKLSISNKELHTLEDMDHVITI 315 (332)
T ss_pred HHHHHHHHHhhHhhCCCCCCEEEEEeCC-------CCccCHH-HHHHHHHhccCCCcEEEEECCCCCCCcc
Confidence 00234 68999999999 6676653 3445666666555588899999998553
No 54
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.66 E-value=8.4e-15 Score=132.28 Aligned_cols=109 Identities=20% Similarity=0.287 Sum_probs=76.0
Q ss_pred cCCCCCceEEEEeCCCCCCChhHHH-HHHHHH---HcCcEEEEeccCCCCCCCCCc-hhhHHHHHHHHhhhhhhhcCCcc
Q 043492 7 PDNQGKYEVILFFPGTSVSNTSYSK-LFDHLA---SHGYIVVSPQLYNLMPPKGNK-EVDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 7 P~~~~~~Pvvv~~hG~~~~~~~~~~-l~~~La---s~Gy~Vv~~d~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
|.++...|.|||+||++++...|.. +...|+ +.||.|+++|++|+|.+.... ...+.....+.+.. .+++.
T Consensus 195 p~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~---~ll~~- 270 (481)
T PLN03087 195 PKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIER---SVLER- 270 (481)
T ss_pred CCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHH---HHHHH-
Confidence 3333345799999999999888874 445555 478999999999998655321 12233333333211 12221
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
++.+++.++||||||.+++.++..+|+ +++++++++|.
T Consensus 271 --lg~~k~~LVGhSmGG~iAl~~A~~~Pe------~V~~LVLi~~~ 308 (481)
T PLN03087 271 --YKVKSFHIVAHSLGCILALALAVKHPG------AVKSLTLLAPP 308 (481)
T ss_pred --cCCCCEEEEEECHHHHHHHHHHHhChH------hccEEEEECCC
Confidence 456799999999999999999999987 67888887753
No 55
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.65 E-value=9.6e-15 Score=121.51 Aligned_cols=100 Identities=19% Similarity=0.127 Sum_probs=74.6
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEE
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALM 92 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~ 92 (278)
.|+|||+||++++...|..+++.| + +|.|+++|++|+|.+.... ..+.....+++.+ +++. ++.+++.++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~----~l~~---~~~~~~~lv 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQ----TLQS---YNILPYWLV 71 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc-ccCHHHHHHHHHH----HHHH---cCCCCeEEE
Confidence 378999999999999999999998 3 6999999999998765332 1244444444322 2222 356799999
Q ss_pred EeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 93 GHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 93 GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
||||||.+|+.++..++.. ++++++++++.
T Consensus 72 G~S~Gg~va~~~a~~~~~~-----~v~~lvl~~~~ 101 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAG-----GLCGLIVEGGN 101 (242)
T ss_pred EECHHHHHHHHHHHhCCcc-----cccEEEEeCCC
Confidence 9999999999999987541 37777776544
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.65 E-value=5.9e-15 Score=119.76 Aligned_cols=165 Identities=17% Similarity=0.174 Sum_probs=123.0
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHc-CcEEEEeccCCCCCCC----CCchhhHHHHHHHHhhhhhhhcCCccccCCC
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPK----GNKEVDAAAEEINWLPKGLQSHLPENVVADL 86 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~ 86 (278)
..++++|+||.......+..+...|.++ .+.|+++|+.|.|.+. ......|+..+.+||.++ .. ..
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~--------~g-~~ 129 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNR--------YG-SP 129 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhh--------cC-CC
Confidence 5689999999987777777888888884 8999999999876544 334567888899997552 22 56
Q ss_pred CceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCcccc-------CccCCCCCeEEEecC
Q 043492 87 NYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDY-------ESFNFSIPVTVIGTG 159 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~P~Lii~g~ 159 (278)
++|+|+|||+|...++.+|.+.+ +.++|+.+|+.+...---......+.+ .-+.+++|+|++||+
T Consensus 130 ~~Iil~G~SiGt~~tv~Lasr~~--------~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~PVLiiHgt 201 (258)
T KOG1552|consen 130 ERIILYGQSIGTVPTVDLASRYP--------LAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKITCPVLIIHGT 201 (258)
T ss_pred ceEEEEEecCCchhhhhHhhcCC--------cceEEEeccchhhhhhhccCcceEEeeccccccCcceeccCCEEEEecc
Confidence 79999999999999999998875 578999999886522100000000111 124688999999999
Q ss_pred CCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcccc
Q 043492 160 LGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDV 202 (278)
Q Consensus 160 ~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f 202 (278)
. |.+.+. ....++|+.++.+- .-+++.|+||.+.
T Consensus 202 d-------Devv~~-sHg~~Lye~~k~~~-epl~v~g~gH~~~ 235 (258)
T KOG1552|consen 202 D-------DEVVDF-SHGKALYERCKEKV-EPLWVKGAGHNDI 235 (258)
T ss_pred c-------Cceecc-cccHHHHHhccccC-CCcEEecCCCccc
Confidence 9 556665 45678999998875 7789999999854
No 57
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.62 E-value=4.2e-14 Score=125.09 Aligned_cols=110 Identities=13% Similarity=0.116 Sum_probs=81.6
Q ss_pred EecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch----hhHHHHHHHHhhhhhhhcCCc
Q 043492 5 VFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE----VDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 5 ~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~ 80 (278)
|.....+..|+|||+||++++...|..++..|++ +|.|+++|++|+|.+..... ..++....+++..-++.
T Consensus 119 y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~---- 193 (383)
T PLN03084 119 CVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE---- 193 (383)
T ss_pred EEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH----
Confidence 3333334568999999999999999999999986 69999999999986653321 22344444443322222
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
+..+++.|+|||+||.+++.++..+|+ +++++++++|..
T Consensus 194 ---l~~~~~~LvG~s~GG~ia~~~a~~~P~------~v~~lILi~~~~ 232 (383)
T PLN03084 194 ---LKSDKVSLVVQGYFSPPVVKYASAHPD------KIKKLILLNPPL 232 (383)
T ss_pred ---hCCCCceEEEECHHHHHHHHHHHhChH------hhcEEEEECCCC
Confidence 345689999999999999999999887 788888888653
No 58
>PRK06489 hypothetical protein; Provisional
Probab=99.62 E-value=1.5e-14 Score=127.70 Aligned_cols=103 Identities=16% Similarity=0.213 Sum_probs=71.1
Q ss_pred ceEEEEeCCCCCCChhHH--HHHHHH-------HHcCcEEEEeccCCCCCCCCCch-------hhHHHHHHHHhhhhhhh
Q 043492 13 YEVILFFPGTSVSNTSYS--KLFDHL-------ASHGYIVVSPQLYNLMPPKGNKE-------VDAAAEEINWLPKGLQS 76 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~--~l~~~L-------as~Gy~Vv~~d~~~~~~~~~~~~-------~~~~~~~~~~l~~~l~~ 76 (278)
.|.|||+||++++...|. .+.+.| .+.+|.|+++|++|+|.+..... ..++....+++...+.
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~- 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT- 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH-
Confidence 689999999999887764 555555 25679999999999986543211 1223333333211111
Q ss_pred cCCccccCCCCceE-EEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 77 HLPENVVADLNYSA-LMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 77 ~~~~~~~~d~~~i~-l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
+ .++.+++. |+||||||.+|+.++.++|+ ++++++++++.
T Consensus 148 --~---~lgi~~~~~lvG~SmGG~vAl~~A~~~P~------~V~~LVLi~s~ 188 (360)
T PRK06489 148 --E---GLGVKHLRLILGTSMGGMHAWMWGEKYPD------FMDALMPMASQ 188 (360)
T ss_pred --H---hcCCCceeEEEEECHHHHHHHHHHHhCch------hhheeeeeccC
Confidence 1 14556775 89999999999999999997 78888877653
No 59
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.62 E-value=3.3e-15 Score=128.80 Aligned_cols=174 Identities=20% Similarity=0.181 Sum_probs=109.0
Q ss_pred cEEEecC-CCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCC-----------------CCch-h--
Q 043492 2 LFIVFPD-NQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPK-----------------GNKE-V-- 60 (278)
Q Consensus 2 ~~i~~P~-~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----------------~~~~-~-- 60 (278)
+.++.|. ..++.|+||.+||+++....+...+ .++..||+|+++|.+|.+... +... .
T Consensus 71 g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~ 149 (320)
T PF05448_consen 71 GWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPED 149 (320)
T ss_dssp EEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT
T ss_pred EEEEecCCCCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHH
Confidence 4678898 6789999999999999877776654 489999999999999886211 0001 1
Q ss_pred -------hHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCC
Q 043492 61 -------DAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYF 133 (278)
Q Consensus 61 -------~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~ 133 (278)
.|...+++.+. ....+|.++|++.|.|+||.+++.+|.-++ +|++++...|+......
T Consensus 150 ~yyr~~~~D~~ravd~l~--------slpevD~~rI~v~G~SqGG~lal~~aaLd~-------rv~~~~~~vP~l~d~~~ 214 (320)
T PF05448_consen 150 YYYRRVYLDAVRAVDFLR--------SLPEVDGKRIGVTGGSQGGGLALAAAALDP-------RVKAAAADVPFLCDFRR 214 (320)
T ss_dssp -HHHHHHHHHHHHHHHHH--------TSTTEEEEEEEEEEETHHHHHHHHHHHHSS-------T-SEEEEESESSSSHHH
T ss_pred HHHHHHHHHHHHHHHHHH--------hCCCcCcceEEEEeecCchHHHHHHHHhCc-------cccEEEecCCCccchhh
Confidence 12222223221 123478899999999999999999999887 68999999998753111
Q ss_pred CC--CC--CC--C-----------------c---ccc-----CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHH
Q 043492 134 HS--EL--DP--P-----------------I---LDY-----ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFN 182 (278)
Q Consensus 134 ~~--~~--~~--~-----------------~---~~~-----~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~ 182 (278)
.. .. .+ . + +.| -+..+++|+++-.|=. |...|+ .++-..|+
T Consensus 215 ~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~-------D~~cPP-~t~fA~yN 286 (320)
T PF05448_consen 215 ALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQ-------DPVCPP-STQFAAYN 286 (320)
T ss_dssp HHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT--------SSS-H-HHHHHHHC
T ss_pred hhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecC-------CCCCCc-hhHHHHHh
Confidence 00 00 00 0 0 011 1257999999999998 777777 45777899
Q ss_pred HhcCCcceeEEecCCCcc
Q 043492 183 RCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 183 ~~~~~~~~~~~~~g~~H~ 200 (278)
.++.++ .+.+++..+|.
T Consensus 287 ~i~~~K-~l~vyp~~~He 303 (320)
T PF05448_consen 287 AIPGPK-ELVVYPEYGHE 303 (320)
T ss_dssp C--SSE-EEEEETT--SS
T ss_pred ccCCCe-eEEeccCcCCC
Confidence 998886 99999999997
No 60
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.61 E-value=5.9e-14 Score=130.47 Aligned_cols=111 Identities=18% Similarity=0.182 Sum_probs=83.5
Q ss_pred cEEEecCCCCCceEEEEeCCCCCCCh----hHHHHHHHHHHcCcEEEEeccCCCCCCCC------CchhhHHHHHHHHhh
Q 043492 2 LFIVFPDNQGKYEVILFFPGTSVSNT----SYSKLFDHLASHGYIVVSPQLYNLMPPKG------NKEVDAAAEEINWLP 71 (278)
Q Consensus 2 ~~i~~P~~~~~~Pvvv~~hG~~~~~~----~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~------~~~~~~~~~~~~~l~ 71 (278)
+.+|.|...++.|+||++||++.+.. .....++.|+++||.|+++|++|++.+.+ .....|+..+++|+.
T Consensus 11 ~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~ 90 (550)
T TIGR00976 11 IDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIA 90 (550)
T ss_pred EEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHH
Confidence 46788987778999999999997653 22345678999999999999999876553 344567888888864
Q ss_pred hhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 72 KGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 72 ~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
++ ...+ .+|+++|||+||.+++.++...+. ++++++..++.
T Consensus 91 ~q--------~~~~-~~v~~~G~S~GG~~a~~~a~~~~~------~l~aiv~~~~~ 131 (550)
T TIGR00976 91 KQ--------PWCD-GNVGMLGVSYLAVTQLLAAVLQPP------ALRAIAPQEGV 131 (550)
T ss_pred hC--------CCCC-CcEEEEEeChHHHHHHHHhccCCC------ceeEEeecCcc
Confidence 31 1123 699999999999999999988764 45566554443
No 61
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.61 E-value=1.2e-14 Score=122.01 Aligned_cols=109 Identities=23% Similarity=0.274 Sum_probs=80.4
Q ss_pred EEecCCCCCceEEEEeCCCCCC----ChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch-------hhHHHHHHHHhhh
Q 043492 4 IVFPDNQGKYEVILFFPGTSVS----NTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE-------VDAAAEEINWLPK 72 (278)
Q Consensus 4 i~~P~~~~~~Pvvv~~hG~~~~----~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~-------~~~~~~~~~~l~~ 72 (278)
++.|...++.|+|||+||+++. ...+..+++.|+++||.|+.+|++|+|.+..... ..|+..+++++.+
T Consensus 16 ~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~ 95 (266)
T TIGR03101 16 YHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIE 95 (266)
T ss_pred EecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHh
Confidence 3446555667999999999864 3456778999999999999999999986543211 1223333333221
Q ss_pred hhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 73 GLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 73 ~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
.+.++++|+||||||.+++.++.+++. +++++++++|+..
T Consensus 96 -----------~~~~~v~LvG~SmGG~vAl~~A~~~p~------~v~~lVL~~P~~~ 135 (266)
T TIGR03101 96 -----------QGHPPVTLWGLRLGALLALDAANPLAA------KCNRLVLWQPVVS 135 (266)
T ss_pred -----------cCCCCEEEEEECHHHHHHHHHHHhCcc------ccceEEEeccccc
Confidence 235689999999999999999988875 6888999998764
No 62
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.61 E-value=5.3e-14 Score=118.17 Aligned_cols=105 Identities=26% Similarity=0.359 Sum_probs=78.6
Q ss_pred CCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCc
Q 043492 9 NQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNY 88 (278)
Q Consensus 9 ~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~ 88 (278)
..+..|+|+++||+..+..+|+.....|+++||.|+++|.+|.|.++....... ..++.+..++..+++. +..++
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~--Yt~~~l~~di~~lld~---Lg~~k 114 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISE--YTIDELVGDIVALLDH---LGLKK 114 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcce--eeHHHHHHHHHHHHHH---hccce
Confidence 456789999999999999999999999999999999999999987664433211 1111112223333332 45789
Q ss_pred eEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEec
Q 043492 89 SALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGV 124 (278)
Q Consensus 89 i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~ 124 (278)
+.++||++|+.+|..+|..+|+ ++++++.+
T Consensus 115 ~~lvgHDwGaivaw~la~~~Pe------rv~~lv~~ 144 (322)
T KOG4178|consen 115 AFLVGHDWGAIVAWRLALFYPE------RVDGLVTL 144 (322)
T ss_pred eEEEeccchhHHHHHHHHhChh------hcceEEEe
Confidence 9999999999999999999997 55555543
No 63
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.56 E-value=2.1e-13 Score=118.19 Aligned_cols=181 Identities=18% Similarity=0.107 Sum_probs=121.2
Q ss_pred CcEEEec--CCCCCceEEEEeCCCC---CCChhH-HHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhh
Q 043492 1 PLFIVFP--DNQGKYEVILFFPGTS---VSNTSY-SKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGL 74 (278)
Q Consensus 1 p~~i~~P--~~~~~~Pvvv~~hG~~---~~~~~~-~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l 74 (278)
|+.+|.| ....+.|+|||+||++ ++...+ ..+...++..|++|+++|++-...-.......++..++.|+.++.
T Consensus 65 ~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~ 144 (312)
T COG0657 65 PVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANA 144 (312)
T ss_pred eEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhh
Confidence 4688999 4455799999999999 455566 445555666899999999876544445566778888999976543
Q ss_pred hhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCC--CC------------
Q 043492 75 QSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELD--PP------------ 140 (278)
Q Consensus 75 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~--~~------------ 140 (278)
.. ...|.++|+|+|+|.||.+++.++....+. ......+.++++|+.........+. ..
T Consensus 145 ~~-----~g~dp~~i~v~GdSAGG~La~~~a~~~~~~--~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (312)
T COG0657 145 AE-----LGIDPSRIAVAGDSAGGHLALALALAARDR--GLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAW 217 (312)
T ss_pred Hh-----hCCCccceEEEecCcccHHHHHHHHHHHhc--CCCCceEEEEEecccCCcccccchhhcCCccccCHHHHHHH
Confidence 32 346899999999999999999998865431 1125678888898876543000000 00
Q ss_pred ---------------cccc---C-ccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhc---CCcceeEEecCCC
Q 043492 141 ---------------ILDY---E-SFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCT---SSDRAHFDATYYG 198 (278)
Q Consensus 141 ---------------~~~~---~-~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~---~~~~~~~~~~g~~ 198 (278)
.... . ..+ -.|+++++|+. |...+. ...+.++++ .+. .+..++|+.
T Consensus 218 ~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~-------D~l~~~---~~~~a~~L~~agv~~-~~~~~~g~~ 285 (312)
T COG0657 218 FADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEF-------DPLRDE---GEAYAERLRAAGVPV-ELRVYPGMI 285 (312)
T ss_pred HHHHhCcCccccCCCccCccccccccC-CCCEEEEecCC-------CcchhH---HHHHHHHHHHcCCeE-EEEEeCCcc
Confidence 0000 0 012 37899999999 666663 333444443 334 789999999
Q ss_pred cc
Q 043492 199 HM 200 (278)
Q Consensus 199 H~ 200 (278)
|.
T Consensus 286 H~ 287 (312)
T COG0657 286 HG 287 (312)
T ss_pred ee
Confidence 93
No 64
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.55 E-value=8.5e-14 Score=122.16 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=64.7
Q ss_pred CceEEEEeCCCCCCCh-----------hHHHHHH---HHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhc
Q 043492 12 KYEVILFFPGTSVSNT-----------SYSKLFD---HLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSH 77 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~-----------~~~~l~~---~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 77 (278)
+.|+|++.||++.+.. .|..+.+ .|.+.+|.|+++|++|++.+... ........+. +..+
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--~~~~~~~a~d----l~~l 130 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV--PIDTADQADA----IALL 130 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--CCCHHHHHHH----HHHH
Confidence 3465555555555443 5666765 56555699999999998654321 1122222232 2223
Q ss_pred CCccccCCCCce-EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 78 LPENVVADLNYS-ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 78 ~~~~~~~d~~~i-~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
++. ++.++. .|+||||||.+|+.++.++|+ ++++++++++.
T Consensus 131 l~~---l~l~~~~~lvG~SmGG~vA~~~A~~~P~------~V~~LvLi~s~ 172 (343)
T PRK08775 131 LDA---LGIARLHAFVGYSYGALVGLQFASRHPA------RVRTLVVVSGA 172 (343)
T ss_pred HHH---cCCCcceEEEEECHHHHHHHHHHHHChH------hhheEEEECcc
Confidence 322 456564 799999999999999999987 67777777654
No 65
>PRK07581 hypothetical protein; Validated
Probab=99.54 E-value=2.6e-13 Score=118.92 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=67.2
Q ss_pred CceEEEEeCCCCCCChhHHHHH---HHHHHcCcEEEEeccCCCCCCCCCch---hhHHH-----HHHHHhhhhhhhcCCc
Q 043492 12 KYEVILFFPGTSVSNTSYSKLF---DHLASHGYIVVSPQLYNLMPPKGNKE---VDAAA-----EEINWLPKGLQSHLPE 80 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~---~~Las~Gy~Vv~~d~~~~~~~~~~~~---~~~~~-----~~~~~l~~~l~~~~~~ 80 (278)
+.|+|++.||++++...+..+. +.|...+|.|+++|++|+|.+..... ..++. .+.+.+......+++
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 118 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE- 118 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH-
Confidence 4578888898887776665553 46777789999999999986542211 00000 011111110001111
Q ss_pred cccCCCCce-EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 81 NVVADLNYS-ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 81 ~~~~d~~~i-~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
.++.+++ .|+||||||.+|+.+|..+|+ +++++++++
T Consensus 119 --~lgi~~~~~lvG~S~GG~va~~~a~~~P~------~V~~Lvli~ 156 (339)
T PRK07581 119 --KFGIERLALVVGWSMGAQQTYHWAVRYPD------MVERAAPIA 156 (339)
T ss_pred --HhCCCceEEEEEeCHHHHHHHHHHHHCHH------HHhhheeee
Confidence 1466784 799999999999999999997 666666654
No 66
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.54 E-value=4.3e-14 Score=114.87 Aligned_cols=176 Identities=20% Similarity=0.220 Sum_probs=123.9
Q ss_pred EEEecCCC-CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCC--------c---------------
Q 043492 3 FIVFPDNQ-GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGN--------K--------------- 58 (278)
Q Consensus 3 ~i~~P~~~-~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~--------~--------------- 58 (278)
++..|... ++.|.||-.||+++....+..+.. ++..||.|+++|.+|.+.+... .
T Consensus 72 wlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~ 150 (321)
T COG3458 72 WLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDT 150 (321)
T ss_pred EEEeecccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCc
Confidence 56678765 899999999999999887656554 8999999999999998643210 0
Q ss_pred -----hhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCC
Q 043492 59 -----EVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYF 133 (278)
Q Consensus 59 -----~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~ 133 (278)
...|+.++++.+ .....+|.+||++.|-|+||.+++.++.-++ +++++++..|+.+....
T Consensus 151 yyyr~v~~D~~~ave~~--------~sl~~vde~Ri~v~G~SqGGglalaaaal~~-------rik~~~~~~Pfl~df~r 215 (321)
T COG3458 151 YYYRGVFLDAVRAVEIL--------ASLDEVDEERIGVTGGSQGGGLALAAAALDP-------RIKAVVADYPFLSDFPR 215 (321)
T ss_pred eEEeeehHHHHHHHHHH--------hccCccchhheEEeccccCchhhhhhhhcCh-------hhhcccccccccccchh
Confidence 011222222221 1123489999999999999999999999888 68999999998864221
Q ss_pred CCCCC--C---Ccccc----------------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcC
Q 043492 134 HSELD--P---PILDY----------------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTS 186 (278)
Q Consensus 134 ~~~~~--~---~~~~~----------------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~ 186 (278)
.-++. . .+.+| -+..+++|+|+..|=. |.+.|+ +.+-..|+.+..
T Consensus 216 ~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~-------D~vcpP-stqFA~yN~l~~ 287 (321)
T COG3458 216 AIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLM-------DPVCPP-STQFAAYNALTT 287 (321)
T ss_pred heeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeeccc-------CCCCCC-hhhHHHhhcccC
Confidence 11110 0 00000 1146899999998887 556665 567788999998
Q ss_pred CcceeEEecCCCccccC
Q 043492 187 SDRAHFDATYYGHMDVL 203 (278)
Q Consensus 187 ~~~~~~~~~g~~H~~f~ 203 (278)
++ ..-+++.-+|...-
T Consensus 288 ~K-~i~iy~~~aHe~~p 303 (321)
T COG3458 288 SK-TIEIYPYFAHEGGP 303 (321)
T ss_pred Cc-eEEEeeccccccCc
Confidence 88 78888888898653
No 67
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.53 E-value=1.5e-13 Score=120.06 Aligned_cols=177 Identities=15% Similarity=0.228 Sum_probs=107.7
Q ss_pred CcEEEecCCCCCceEEEEeCCCCCCChhHHHH-HHHHHHcCcEEEEeccCCCCCCCC----CchhhHHHHHHHHhhhhhh
Q 043492 1 PLFIVFPDNQGKYEVILFFPGTSVSNTSYSKL-FDHLASHGYIVVSPQLYNLMPPKG----NKEVDAAAEEINWLPKGLQ 75 (278)
Q Consensus 1 p~~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l-~~~Las~Gy~Vv~~d~~~~~~~~~----~~~~~~~~~~~~~l~~~l~ 75 (278)
|+++..|...++.|+||++-|..+-.+.+..+ .++|+++|++++++|.||.|.+.. .+...-...+++||.+
T Consensus 178 ~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~--- 254 (411)
T PF06500_consen 178 PGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLAS--- 254 (411)
T ss_dssp EEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHH---
T ss_pred EEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhc---
Confidence 46788899888999999999999988776555 567999999999999999876431 2222335677888644
Q ss_pred hcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC----CCCCCCccc--------
Q 043492 76 SHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH----SELDPPILD-------- 143 (278)
Q Consensus 76 ~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~----~~~~~~~~~-------- 143 (278)
...+|.+||+++|.|+||..|+.+|...+. |+++++++.|.....+.. ..+ |..+.
T Consensus 255 -----~p~VD~~RV~~~G~SfGGy~AvRlA~le~~------RlkavV~~Ga~vh~~ft~~~~~~~~-P~my~d~LA~rlG 322 (411)
T PF06500_consen 255 -----RPWVDHTRVGAWGFSFGGYYAVRLAALEDP------RLKAVVALGAPVHHFFTDPEWQQRV-PDMYLDVLASRLG 322 (411)
T ss_dssp -----STTEEEEEEEEEEETHHHHHHHHHHHHTTT------T-SEEEEES---SCGGH-HHHHTTS--HHHHHHHHHHCT
T ss_pred -----CCccChhheEEEEeccchHHHHHHHHhccc------ceeeEeeeCchHhhhhccHHHHhcC-CHHHHHHHHHHhC
Confidence 234789999999999999999999876544 799999998876443321 111 11100
Q ss_pred ---------------c--------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCC-c
Q 043492 144 ---------------Y--------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYG-H 199 (278)
Q Consensus 144 ---------------~--------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~-H 199 (278)
+ +.....+|+|.+++++ |.+.|.. -..+......++ ....++... |
T Consensus 323 ~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~-------D~v~P~e--D~~lia~~s~~g-k~~~~~~~~~~ 392 (411)
T PF06500_consen 323 MAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGED-------DPVSPIE--DSRLIAESSTDG-KALRIPSKPLH 392 (411)
T ss_dssp -SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT--------SSS-HH--HHHHHHHTBTT--EEEEE-SSSHH
T ss_pred CccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCC-------CCCCCHH--HHHHHHhcCCCC-ceeecCCCccc
Confidence 0 0134568999999999 7888863 223344444445 445555444 7
Q ss_pred ccc
Q 043492 200 MDV 202 (278)
Q Consensus 200 ~~f 202 (278)
++|
T Consensus 393 ~gy 395 (411)
T PF06500_consen 393 MGY 395 (411)
T ss_dssp HHH
T ss_pred cch
Confidence 655
No 68
>PRK11071 esterase YqiA; Provisional
Probab=99.53 E-value=4.1e-13 Score=107.82 Aligned_cols=147 Identities=20% Similarity=0.178 Sum_probs=93.4
Q ss_pred eEEEEeCCCCCCChhHH--HHHHHHHHc--CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 14 EVILFFPGTSVSNTSYS--KLFDHLASH--GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~--~l~~~Las~--Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
|.|||+||++++...+. .+.+.++++ +|.|+++|+++.+ .+..+.+.++.+ . .+.+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~-------~---~~~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVL-------E---HGGDPL 63 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHH-------H---cCCCCe
Confidence 68999999999999876 356777664 7999999998762 222233332211 1 345689
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCC------CCC--CCCCC--Cccc---------c--CccC
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIP------YFH--SELDP--PILD---------Y--ESFN 148 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~------~~~--~~~~~--~~~~---------~--~~~~ 148 (278)
.++||||||.+++.++...+. + +++++|..... ... ....+ ..++ . ....
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~~--------~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~ 134 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFML--------P-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLE 134 (190)
T ss_pred EEEEECHHHHHHHHHHHHcCC--------C-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCC
Confidence 999999999999999998762 2 35566654310 000 00000 0010 0 1123
Q ss_pred CCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 149 FSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 149 ~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
...|+++++|+. |..+|.. ...++|+.+ ....++|++|.
T Consensus 135 ~~~~v~iihg~~-------De~V~~~-~a~~~~~~~-----~~~~~~ggdH~ 173 (190)
T PRK11071 135 SPDLIWLLQQTG-------DEVLDYR-QAVAYYAAC-----RQTVEEGGNHA 173 (190)
T ss_pred ChhhEEEEEeCC-------CCcCCHH-HHHHHHHhc-----ceEEECCCCcc
Confidence 567888999999 7777763 344455532 35678999997
No 69
>PRK10115 protease 2; Provisional
Probab=99.53 E-value=8.9e-13 Score=124.93 Aligned_cols=177 Identities=13% Similarity=0.096 Sum_probs=120.9
Q ss_pred Cc-EEEecC--CCCCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCCCCC-----------CCchhhHHH
Q 043492 1 PL-FIVFPD--NQGKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLMPPK-----------GNKEVDAAA 64 (278)
Q Consensus 1 p~-~i~~P~--~~~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----------~~~~~~~~~ 64 (278)
|+ ++|.|. ..++.|+||+.||..+... .|......|+++||+|+.++.+|++.-+ +.....|+.
T Consensus 430 p~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~ 509 (686)
T PRK10115 430 PVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYL 509 (686)
T ss_pred EEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHH
Confidence 44 445564 2457799999999887653 5667778899999999999999986433 223455666
Q ss_pred HHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCC----CCCCCC--
Q 043492 65 EEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPY----FHSELD-- 138 (278)
Q Consensus 65 ~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~----~~~~~~-- 138 (278)
.+.++|.+ .+..|.+|++++|-|.||.++..++...|+ .++++|+..|+..+.. ....+.
T Consensus 510 a~~~~Lv~--------~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd------lf~A~v~~vp~~D~~~~~~~~~~p~~~~ 575 (686)
T PRK10115 510 DACDALLK--------LGYGSPSLCYGMGGSAGGMLMGVAINQRPE------LFHGVIAQVPFVDVVTTMLDESIPLTTG 575 (686)
T ss_pred HHHHHHHH--------cCCCChHHeEEEEECHHHHHHHHHHhcChh------heeEEEecCCchhHhhhcccCCCCCChh
Confidence 66666533 355789999999999999999999988887 7899999888775421 000000
Q ss_pred -------CCc-------ccc----CccCCCCC-eEEEecCCCCCcCCCCCCCCccccHHHHHHHhc---CCcceeEEe--
Q 043492 139 -------PPI-------LDY----ESFNFSIP-VTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCT---SSDRAHFDA-- 194 (278)
Q Consensus 139 -------~~~-------~~~----~~~~~~~P-~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~---~~~~~~~~~-- 194 (278)
|.. ..+ +..+++.| +|+++|.+ |..+|.. +..+++.+++ .+. ..+++
T Consensus 576 ~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~-------D~RV~~~-~~~k~~a~Lr~~~~~~-~~vl~~~ 646 (686)
T PRK10115 576 EFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLH-------DSQVQYW-EPAKWVAKLRELKTDD-HLLLLCT 646 (686)
T ss_pred HHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCC-------CCCcCch-HHHHHHHHHHhcCCCC-ceEEEEe
Confidence 000 001 22457789 55669999 6677763 3455666664 333 55666
Q ss_pred -cCCCcc
Q 043492 195 -TYYGHM 200 (278)
Q Consensus 195 -~g~~H~ 200 (278)
+++||.
T Consensus 647 ~~~~GHg 653 (686)
T PRK10115 647 DMDSGHG 653 (686)
T ss_pred cCCCCCC
Confidence 899998
No 70
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.52 E-value=9.2e-13 Score=102.08 Aligned_cols=160 Identities=17% Similarity=0.156 Sum_probs=111.5
Q ss_pred EEecCCCCCceEEEEeCCCC-----CCChhHHHHHHHHHHcCcEEEEeccCCCCCCC-----CCchhhHHHHHHHHhhhh
Q 043492 4 IVFPDNQGKYEVILFFPGTS-----VSNTSYSKLFDHLASHGYIVVSPQLYNLMPPK-----GNKEVDAAAEEINWLPKG 73 (278)
Q Consensus 4 i~~P~~~~~~Pvvv~~hG~~-----~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----~~~~~~~~~~~~~~l~~~ 73 (278)
.|.|......|+.|.+|--. .+...-..+++.|.+.||.++-+|++|.|.+. +..+..|+..+++|+...
T Consensus 19 ~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~ 98 (210)
T COG2945 19 RYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQAR 98 (210)
T ss_pred ccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhh
Confidence 35566667789999988543 34456678999999999999999999977554 456789999999996431
Q ss_pred hhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCe
Q 043492 74 LQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPV 153 (278)
Q Consensus 74 l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~ 153 (278)
..+.....++|+|+|+.++++++++.++ ....+.+.|..+. .+ ..+ ...-..|.
T Consensus 99 ---------hp~s~~~~l~GfSFGa~Ia~~la~r~~e-------~~~~is~~p~~~~-~d------fs~---l~P~P~~~ 152 (210)
T COG2945 99 ---------HPDSASCWLAGFSFGAYIAMQLAMRRPE-------ILVFISILPPINA-YD------FSF---LAPCPSPG 152 (210)
T ss_pred ---------CCCchhhhhcccchHHHHHHHHHHhccc-------ccceeeccCCCCc-hh------hhh---ccCCCCCc
Confidence 1233345889999999999999999874 3445555544331 10 000 12356899
Q ss_pred EEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 154 TVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 154 Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
++|+|+.| .+++ ...-++..++....++++++++||
T Consensus 153 lvi~g~~D-------dvv~----l~~~l~~~~~~~~~~i~i~~a~HF 188 (210)
T COG2945 153 LVIQGDAD-------DVVD----LVAVLKWQESIKITVITIPGADHF 188 (210)
T ss_pred eeEecChh-------hhhc----HHHHHHhhcCCCCceEEecCCCce
Confidence 99999994 3322 344555554433378999999999
No 71
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.52 E-value=8.7e-13 Score=116.10 Aligned_cols=109 Identities=16% Similarity=0.131 Sum_probs=71.8
Q ss_pred EEEecCCC-CCceEEEEeCCCCCCChh-----HHHHHHHHHHcCcEEEEeccCCCCCCCCCchhh-----HHHHHHHHhh
Q 043492 3 FIVFPDNQ-GKYEVILFFPGTSVSNTS-----YSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVD-----AAAEEINWLP 71 (278)
Q Consensus 3 ~i~~P~~~-~~~Pvvv~~hG~~~~~~~-----~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~-----~~~~~~~~l~ 71 (278)
..|.|..+ ...+.|+++||+..+... +..+++.|+++||.|+++|+++.+.+....... ++..+++++.
T Consensus 51 ~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~ 130 (350)
T TIGR01836 51 YRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYIC 130 (350)
T ss_pred EEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 34556432 333458999998644433 258999999999999999998765433221111 1233344432
Q ss_pred hhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 72 KGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 72 ~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
+ ..+.+++.++||||||.+++.++..+++ ++++++.++|.
T Consensus 131 ~----------~~~~~~i~lvGhS~GG~i~~~~~~~~~~------~v~~lv~~~~p 170 (350)
T TIGR01836 131 R----------TSKLDQISLLGICQGGTFSLCYAALYPD------KIKNLVTMVTP 170 (350)
T ss_pred H----------HhCCCcccEEEECHHHHHHHHHHHhCch------heeeEEEeccc
Confidence 2 1245699999999999999999888775 56666666653
No 72
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.51 E-value=5.7e-13 Score=109.33 Aligned_cols=173 Identities=17% Similarity=0.142 Sum_probs=94.0
Q ss_pred EEecCCCCCceEEEEeCCCCCCChhHHHHHH-HHHHcCcEEEEeccCC------CCC------C------CCCchhhHHH
Q 043492 4 IVFPDNQGKYEVILFFPGTSVSNTSYSKLFD-HLASHGYIVVSPQLYN------LMP------P------KGNKEVDAAA 64 (278)
Q Consensus 4 i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~-~Las~Gy~Vv~~d~~~------~~~------~------~~~~~~~~~~ 64 (278)
|..|. ....|+|||+||+|.+...+..+.+ .+......++.++-+. .+. . ....+..++.
T Consensus 6 i~~~~-~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 6 IIEPK-GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp EE--S-ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred EeCCC-CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 33444 4568899999999999866666655 2333456677664321 011 0 0111233344
Q ss_pred HHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCcccc
Q 043492 65 EEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDY 144 (278)
Q Consensus 65 ~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~ 144 (278)
+....+.+-+....+ ..++.+||.++|+|+||.+|+.++...+. .+.++++++++...... . ....
T Consensus 85 ~s~~~l~~li~~~~~--~~i~~~ri~l~GFSQGa~~al~~~l~~p~------~~~gvv~lsG~~~~~~~---~-~~~~-- 150 (216)
T PF02230_consen 85 ESAERLDELIDEEVA--YGIDPSRIFLGGFSQGAAMALYLALRYPE------PLAGVVALSGYLPPESE---L-EDRP-- 150 (216)
T ss_dssp HHHHHHHHHHHHHHH--TT--GGGEEEEEETHHHHHHHHHHHCTSS------TSSEEEEES---TTGCC---C-HCCH--
T ss_pred HHHHHHHHHHHHHHH--cCCChhheehhhhhhHHHHHHHHHHHcCc------CcCEEEEeecccccccc---c-cccc--
Confidence 433333222222221 12788999999999999999999999987 78999999876533111 1 0000
Q ss_pred CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCc--ceeEEecCCCcc
Q 043492 145 ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSD--RAHFDATYYGHM 200 (278)
Q Consensus 145 ~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~--~~~~~~~g~~H~ 200 (278)
. ..-++|++++||+. |...|.. ...+..+.++... ..+..++|.||.
T Consensus 151 ~-~~~~~pi~~~hG~~-------D~vvp~~-~~~~~~~~L~~~~~~v~~~~~~g~gH~ 199 (216)
T PF02230_consen 151 E-ALAKTPILIIHGDE-------DPVVPFE-WAEKTAEFLKAAGANVEFHEYPGGGHE 199 (216)
T ss_dssp C-CCCTS-EEEEEETT--------SSSTHH-HHHHHHHHHHCTT-GEEEEEETT-SSS
T ss_pred c-ccCCCcEEEEecCC-------CCcccHH-HHHHHHHHHHhcCCCEEEEEcCCCCCC
Confidence 0 11278999999999 7777763 2334455554322 278889999996
No 73
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.51 E-value=4.4e-13 Score=137.41 Aligned_cols=102 Identities=17% Similarity=0.142 Sum_probs=76.3
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc--------hhhHHHHHHHHhhhhhhhcCCcccc
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK--------EVDAAAEEINWLPKGLQSHLPENVV 83 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~--------~~~~~~~~~~~l~~~l~~~~~~~~~ 83 (278)
..|+|||+||++++...|..+++.|++. |.|+++|++|+|.+.... ...++....+++.+ +++.
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~----ll~~--- 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYK----LIEH--- 1441 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHH----HHHH---
Confidence 4679999999999999999999999875 999999999998654221 11223333443322 2211
Q ss_pred CCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 84 ADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
++.+++.|+||||||.+++.++.++|+ ++++++++++.
T Consensus 1442 l~~~~v~LvGhSmGG~iAl~~A~~~P~------~V~~lVlis~~ 1479 (1655)
T PLN02980 1442 ITPGKVTLVGYSMGARIALYMALRFSD------KIEGAVIISGS 1479 (1655)
T ss_pred hCCCCEEEEEECHHHHHHHHHHHhChH------hhCEEEEECCC
Confidence 456799999999999999999999887 67888777654
No 74
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.50 E-value=3.4e-13 Score=118.71 Aligned_cols=103 Identities=16% Similarity=0.257 Sum_probs=68.4
Q ss_pred CceEEEEeCCCCCCCh-----------hHHHHH---HHHHHcCcEEEEeccCC--CCCCCCC-----c-------hhhHH
Q 043492 12 KYEVILFFPGTSVSNT-----------SYSKLF---DHLASHGYIVVSPQLYN--LMPPKGN-----K-------EVDAA 63 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~-----------~~~~l~---~~Las~Gy~Vv~~d~~~--~~~~~~~-----~-------~~~~~ 63 (278)
..|.||++||++++.. .|..+. +.|.+.+|.|+++|++| ++.+... . ....+
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 3579999999999763 255554 36667889999999999 3332210 0 01223
Q ss_pred HHHHHHhhhhhhhcCCccccCCCCc-eEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 64 AEEINWLPKGLQSHLPENVVADLNY-SALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 64 ~~~~~~l~~~l~~~~~~~~~~d~~~-i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
....+.+ ..+++. ++.++ +.++||||||.+++.++..+|. +++.++++++.
T Consensus 110 ~~~~~~~----~~~~~~---l~~~~~~~l~G~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~ 161 (351)
T TIGR01392 110 RDDVKAQ----KLLLDH---LGIEQIAAVVGGSMGGMQALEWAIDYPE------RVRAIVVLATS 161 (351)
T ss_pred HHHHHHH----HHHHHH---cCCCCceEEEEECHHHHHHHHHHHHChH------hhheEEEEccC
Confidence 3333332 222222 45678 9999999999999999999886 66777766644
No 75
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.46 E-value=5.2e-12 Score=106.19 Aligned_cols=88 Identities=18% Similarity=0.197 Sum_probs=66.3
Q ss_pred CCCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCCCCC-------CCchhhHHHHHHHHhhhhhhhcCCc
Q 043492 10 QGKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLMPPK-------GNKEVDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~~~~ 80 (278)
..+.|.||.+||+.|+.. ....|++.+..+||.|++++.+|++... ......|+...++|+.+.
T Consensus 72 ~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~------- 144 (345)
T COG0429 72 AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKAR------- 144 (345)
T ss_pred ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHh-------
Confidence 446799999999997654 4477889999999999999999986533 234567888888886431
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhh
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
.-..++..+|.|+||.+...+.++
T Consensus 145 ---~~~r~~~avG~SLGgnmLa~ylge 168 (345)
T COG0429 145 ---FPPRPLYAVGFSLGGNMLANYLGE 168 (345)
T ss_pred ---CCCCceEEEEecccHHHHHHHHHh
Confidence 235689999999999555555443
No 76
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.46 E-value=4.6e-12 Score=109.14 Aligned_cols=126 Identities=23% Similarity=0.256 Sum_probs=96.5
Q ss_pred CcEEEecCC--C-CCceEEEEeCCCC---C--CChhHHHHHHHHHH-cCcEEEEeccCCCCCCCCCchhhHHHHHHHHhh
Q 043492 1 PLFIVFPDN--Q-GKYEVILFFPGTS---V--SNTSYSKLFDHLAS-HGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLP 71 (278)
Q Consensus 1 p~~i~~P~~--~-~~~Pvvv~~hG~~---~--~~~~~~~l~~~Las-~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~ 71 (278)
++.||.|.. . .+.|+|||+||+| + +...|..++.++++ .+.+|+++|++-.-.........|...++.|+.
T Consensus 75 ~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~ 154 (336)
T KOG1515|consen 75 PVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVL 154 (336)
T ss_pred EEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHH
Confidence 468999973 3 5789999999999 3 35679999999955 599999999876543344556778889999986
Q ss_pred hhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC
Q 043492 72 KGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 72 ~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
++. .+ ....|.+||+|+|-|.||.+|..++.+..+......++++.+++.|+...
T Consensus 155 ~~~--~~--~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 155 KNS--WL--KLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred HhH--HH--HhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 541 11 23579999999999999999999998755322223589999999998854
No 77
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.46 E-value=4.1e-13 Score=105.78 Aligned_cols=172 Identities=17% Similarity=0.168 Sum_probs=126.2
Q ss_pred CCCCceEEEEeCCCCCCChhHHHHHHHHHHc-CcEEEEeccCCCCCCCC----CchhhHHHHHHHHhhhhhhhcCCcccc
Q 043492 9 NQGKYEVILFFPGTSVSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPKG----NKEVDAAAEEINWLPKGLQSHLPENVV 83 (278)
Q Consensus 9 ~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~ 83 (278)
++...|+++++|+..|+-...-.+++-+-.+ +..|+.++++|-|.+.+ .+-..|.+.+++++.. ...
T Consensus 74 ~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t--------~~~ 145 (300)
T KOG4391|consen 74 SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMT--------RPD 145 (300)
T ss_pred ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhc--------Ccc
Confidence 4558899999999999998887888776554 99999999999875543 3334577888888633 233
Q ss_pred CCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCC-CCCcccc----------Cc----cC
Q 043492 84 ADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSEL-DPPILDY----------ES----FN 148 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~-~~~~~~~----------~~----~~ 148 (278)
+|..++.++|.|+||+.|+.+|.++.. ++.+++.-..+.+.+.....+ .|....+ .+ ..
T Consensus 146 ~dktkivlfGrSlGGAvai~lask~~~------ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S~~ki~~ 219 (300)
T KOG4391|consen 146 LDKTKIVLFGRSLGGAVAIHLASKNSD------RISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWLSYRKIGQ 219 (300)
T ss_pred CCcceEEEEecccCCeeEEEeeccchh------heeeeeeechhccchhhhhheeccchhhHHHHHHHHhhhcchhhhcc
Confidence 678899999999999999999998775 788888766655542111111 1101000 00 23
Q ss_pred CCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcccc
Q 043492 149 FSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDV 202 (278)
Q Consensus 149 ~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f 202 (278)
-++|+|++.|.+ |..+|+ ....+.|..+.+..|.+..+|++.|.+-
T Consensus 220 ~~~P~LFiSGlk-------DelVPP-~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT 265 (300)
T KOG4391|consen 220 CRMPFLFISGLK-------DELVPP-VMMRQLYELCPSRTKRLAEFPDGTHNDT 265 (300)
T ss_pred ccCceEEeecCc-------cccCCc-HHHHHHHHhCchhhhhheeCCCCccCce
Confidence 468999999999 778887 3466789999888889999999999843
No 78
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.46 E-value=1.6e-12 Score=112.57 Aligned_cols=93 Identities=19% Similarity=0.223 Sum_probs=68.8
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHc-CcEEEEeccCCCCCCC-CC-chhhHHHHHHHHhhhhhhhcCCccccCCCC
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPK-GN-KEVDAAAEEINWLPKGLQSHLPENVVADLN 87 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~-~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~ 87 (278)
...|.||++|||+++...|+.....|.+. |+.|.++|.+|.+... .. ....+.......+..-... ....
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~-------~~~~ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKE-------VFVE 128 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHh-------hcCc
Confidence 46789999999999999999999999887 6999999999977322 22 2223333333332221221 2345
Q ss_pred ceEEEEeChhHHHHHHHHhhCCC
Q 043492 88 YSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
++.++|||+||.+|+.+|...|+
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~ 151 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPE 151 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcc
Confidence 79999999999999999999987
No 79
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.46 E-value=1.4e-12 Score=116.04 Aligned_cols=102 Identities=14% Similarity=0.238 Sum_probs=67.2
Q ss_pred ceEEEEeCCCCCCChh-------------HHHHH---HHHHHcCcEEEEeccCCC-CCCCCCc--------------hhh
Q 043492 13 YEVILFFPGTSVSNTS-------------YSKLF---DHLASHGYIVVSPQLYNL-MPPKGNK--------------EVD 61 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~-------------~~~l~---~~Las~Gy~Vv~~d~~~~-~~~~~~~--------------~~~ 61 (278)
.|.||++||++++... |..++ ..|-..+|.|+++|++|. +.+.... ...
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 6899999999998874 44444 234356799999999873 2111100 012
Q ss_pred HHHHHHHHhhhhhhhcCCccccCCCCc-eEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 62 AAAEEINWLPKGLQSHLPENVVADLNY-SALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 62 ~~~~~~~~l~~~l~~~~~~~~~~d~~~-i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
++....++ +..+++. ++.++ +.++||||||.+++.++..++. ++++++++++.
T Consensus 128 ~~~~~~~~----~~~~l~~---l~~~~~~~lvG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~ 181 (379)
T PRK00175 128 TIRDWVRA----QARLLDA---LGITRLAAVVGGSMGGMQALEWAIDYPD------RVRSALVIASS 181 (379)
T ss_pred CHHHHHHH----HHHHHHH---hCCCCceEEEEECHHHHHHHHHHHhChH------hhhEEEEECCC
Confidence 33333333 2222222 46678 4899999999999999999887 67777776644
No 80
>PLN02872 triacylglycerol lipase
Probab=99.45 E-value=2.6e-13 Score=120.34 Aligned_cols=83 Identities=23% Similarity=0.268 Sum_probs=57.6
Q ss_pred CceEEEEeCCCCCCChhH------HHHHHHHHHcCcEEEEeccCCCCCCCC-------Cch----------hhHHHHHHH
Q 043492 12 KYEVILFFPGTSVSNTSY------SKLFDHLASHGYIVVSPQLYNLMPPKG-------NKE----------VDAAAEEIN 68 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~------~~l~~~Las~Gy~Vv~~d~~~~~~~~~-------~~~----------~~~~~~~~~ 68 (278)
+.|+|++.||+..+...| ..++..|+++||.|+.+|.+|.+.+.+ ... ..|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 468999999998877765 457888999999999999998753211 000 123333333
Q ss_pred HhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHH
Q 043492 69 WLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALA 105 (278)
Q Consensus 69 ~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a 105 (278)
++ +. ...+++.++|||+||.+++.++
T Consensus 153 ~i-------~~----~~~~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 153 YV-------YS----ITNSKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred HH-------Hh----ccCCceEEEEECHHHHHHHHHh
Confidence 32 11 1236999999999999998555
No 81
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.45 E-value=1.8e-12 Score=111.96 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=66.8
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch--hhHHHHHHHHhhhhhhhcCCccccCCCCceE
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE--VDAAAEEINWLPKGLQSHLPENVVADLNYSA 90 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~ 90 (278)
.+.||++||+.++... ..+...+...+|.|+++|++|+|.+..... .....++.+++ ..+++. ++.+++.
T Consensus 27 ~~~lvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl----~~l~~~---l~~~~~~ 98 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTD-PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADI----EKLREK---LGIKNWL 98 (306)
T ss_pred CCEEEEECCCCCCCCC-HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHH----HHHHHH---cCCCCEE
Confidence 4678999998877554 345556667789999999999986553221 11222333332 222211 3557899
Q ss_pred EEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc
Q 043492 91 LMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 91 l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
++||||||.+++.++..++. ++++++++++
T Consensus 99 lvG~S~GG~ia~~~a~~~p~------~v~~lvl~~~ 128 (306)
T TIGR01249 99 VFGGSWGSTLALAYAQTHPE------VVTGLVLRGI 128 (306)
T ss_pred EEEECHHHHHHHHHHHHChH------hhhhheeecc
Confidence 99999999999999998876 4555555543
No 82
>PRK05855 short chain dehydrogenase; Validated
Probab=99.43 E-value=3.8e-12 Score=119.16 Aligned_cols=88 Identities=10% Similarity=0.133 Sum_probs=63.7
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc--hhhHHHHHHHHhhhhhhhcCCccccCCCC-c
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK--EVDAAAEEINWLPKGLQSHLPENVVADLN-Y 88 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~d~~-~ 88 (278)
..|+|||+||++++...|..+.+.| ..||.|+++|++|+|.+.... ...+.....+++..-++. +... +
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~-------l~~~~~ 95 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDA-------VSPDRP 95 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHH-------hCCCCc
Confidence 4689999999999999999999999 567999999999998765321 112333444443222222 2333 4
Q ss_pred eEEEEeChhHHHHHHHHhh
Q 043492 89 SALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 89 i~l~GhS~GG~~a~~~a~~ 107 (278)
+.|+||||||.+++.++..
T Consensus 96 ~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 96 VHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred EEEEecChHHHHHHHHHhC
Confidence 9999999999999887765
No 83
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.42 E-value=1.5e-12 Score=106.20 Aligned_cols=168 Identities=18% Similarity=0.177 Sum_probs=109.2
Q ss_pred EEEeCCCC---CCChhHHHHHHHHHH-cCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 16 ILFFPGTS---VSNTSYSKLFDHLAS-HGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 16 vv~~hG~~---~~~~~~~~l~~~Las-~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
|||+||++ ++...+..+++.|++ .|++|+++|++-...........|+.+++.|+.++... ..+|.++|+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~-----~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADK-----LGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHH-----HTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeecccccc-----ccccccceEE
Confidence 79999999 455677888888886 89999999997653334566778899999998664432 2368899999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC-CCC-CCC------CCCCccc--------------------
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI-PYF-HSE------LDPPILD-------------------- 143 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~-~~~-~~~------~~~~~~~-------------------- 143 (278)
+|+|.||.+|+.++....+.. ...++++++++|+... ... ... ...+.+.
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~--~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRG--LPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRDDP 153 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTT--TCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTTST
T ss_pred eecccccchhhhhhhhhhhhc--ccchhhhhcccccccchhccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999997544321 1258999999998644 110 000 0001100
Q ss_pred -cCc--c-CC--CCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCc--ceeEEecCCCcc
Q 043492 144 -YES--F-NF--SIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSD--RAHFDATYYGHM 200 (278)
Q Consensus 144 -~~~--~-~~--~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~--~~~~~~~g~~H~ 200 (278)
..+ . .+ -.|+++++|+. |...+ +...+.++++..+ ..+.+++|..|.
T Consensus 154 ~~sp~~~~~~~~~Pp~~i~~g~~-------D~l~~---~~~~~~~~L~~~gv~v~~~~~~g~~H~ 208 (211)
T PF07859_consen 154 LASPLNASDLKGLPPTLIIHGED-------DVLVD---DSLRFAEKLKKAGVDVELHVYPGMPHG 208 (211)
T ss_dssp TTSGGGSSCCTTCHEEEEEEETT-------STTHH---HHHHHHHHHHHTT-EEEEEEETTEETT
T ss_pred ccccccccccccCCCeeeecccc-------ccchH---HHHHHHHHHHHCCCCEEEEEECCCeEE
Confidence 000 0 12 24899999998 55433 2445666665332 288899999996
No 84
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.40 E-value=7.1e-13 Score=114.04 Aligned_cols=171 Identities=20% Similarity=0.278 Sum_probs=91.5
Q ss_pred CcEEEecCC-CCCceEEEEeCCCCCCChh------------------HHHHHHHHHHcCcEEEEeccCCCCCCCCCc---
Q 043492 1 PLFIVFPDN-QGKYEVILFFPGTSVSNTS------------------YSKLFDHLASHGYIVVSPQLYNLMPPKGNK--- 58 (278)
Q Consensus 1 p~~i~~P~~-~~~~Pvvv~~hG~~~~~~~------------------~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~--- 58 (278)
|++++.|.. +++.|.||++||-++..+. ...++.+||++||+|+++|..+.|......
T Consensus 102 paylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~ 181 (390)
T PF12715_consen 102 PAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAA 181 (390)
T ss_dssp EEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCT
T ss_pred EEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccc
Confidence 567889987 7899999999998864321 134689999999999999998876432110
Q ss_pred -----hhhHH-----------HHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEE
Q 043492 59 -----EVDAA-----------AEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALV 122 (278)
Q Consensus 59 -----~~~~~-----------~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v 122 (278)
....+ .....|....+-+.+.....+|.+||+++|+||||..++.++.-++ +|++.+
T Consensus 182 ~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-------RIka~v 254 (390)
T PF12715_consen 182 QGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-------RIKATV 254 (390)
T ss_dssp TTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-------T--EEE
T ss_pred cccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-------hhHhHh
Confidence 00011 1111221111222233345689999999999999999999999887 577776
Q ss_pred ecCcCCCC-------CCC--------CC---CCCCCcccc------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHH
Q 043492 123 GVDPVAGI-------PYF--------HS---ELDPPILDY------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQ 178 (278)
Q Consensus 123 ~~~p~~~~-------~~~--------~~---~~~~~~~~~------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~ 178 (278)
+.+-.... ... +. .+.|-+..+ .+..-..|+|+++|+. |...|. ..
T Consensus 255 ~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~-------Dklf~i---V~ 324 (390)
T PF12715_consen 255 ANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGK-------DKLFPI---VR 324 (390)
T ss_dssp EES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B--------HHHHHH---HH
T ss_pred hhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCc-------ccccHH---HH
Confidence 54322211 000 00 112222222 1123468999999998 544443 56
Q ss_pred HHHHHhcCCc
Q 043492 179 QFFNRCTSSD 188 (278)
Q Consensus 179 ~~~~~~~~~~ 188 (278)
..|+....+.
T Consensus 325 ~AY~~~~~p~ 334 (390)
T PF12715_consen 325 RAYAIMGAPD 334 (390)
T ss_dssp HHHHHTT-GG
T ss_pred HHHHhcCCCc
Confidence 6788877665
No 85
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.37 E-value=9.6e-13 Score=102.83 Aligned_cols=179 Identities=14% Similarity=0.134 Sum_probs=111.6
Q ss_pred cEEEecCCCCCceEEEEeCCCCC---CChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcC
Q 043492 2 LFIVFPDNQGKYEVILFFPGTSV---SNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHL 78 (278)
Q Consensus 2 ~~i~~P~~~~~~Pvvv~~hG~~~---~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 78 (278)
++||.|. ..-|+.||+||+.+ +++.--..+.-+...||+|+++++.-+ +.. ..+++.+..+...++.++
T Consensus 58 VDIwg~~--~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~-~q~-----htL~qt~~~~~~gv~fil 129 (270)
T KOG4627|consen 58 VDIWGST--NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLC-PQV-----HTLEQTMTQFTHGVNFIL 129 (270)
T ss_pred EEEecCC--CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcC-ccc-----ccHHHHHHHHHHHHHHHH
Confidence 4678775 34579999999984 555666778889999999999996332 111 123333333233333333
Q ss_pred CccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC------CCC-CCCCCC---Ccccc---C
Q 043492 79 PENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI------PYF-HSELDP---PILDY---E 145 (278)
Q Consensus 79 ~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~------~~~-~~~~~~---~~~~~---~ 145 (278)
+. .-+..++.+.|||.|+++|+++..+... .+|.++++++..... ..+ ...+.. ...+. .
T Consensus 130 k~--~~n~k~l~~gGHSaGAHLa~qav~R~r~-----prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~ 202 (270)
T KOG4627|consen 130 KY--TENTKVLTFGGHSAGAHLAAQAVMRQRS-----PRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWE 202 (270)
T ss_pred Hh--cccceeEEEcccchHHHHHHHHHHHhcC-----chHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHH
Confidence 32 1256689999999999999999876432 267777766654421 000 000100 00000 1
Q ss_pred ccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCCC
Q 043492 146 SFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLDD 205 (278)
Q Consensus 146 ~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d~ 205 (278)
-..++.|+|++.++. .+|...++.+-|....... .+-.++|++|++.+..
T Consensus 203 ~~~v~~~ilVv~~~~---------espklieQnrdf~~q~~~a-~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 203 YTDVTVWILVVAAEH---------ESPKLIEQNRDFADQLRKA-SFTLFKNYDHYDIIEE 252 (270)
T ss_pred hcCceeeeeEeeecc---------cCcHHHHhhhhHHHHhhhc-ceeecCCcchhhHHHH
Confidence 136889999999998 3455566777665554444 5788999999987654
No 86
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.37 E-value=5e-11 Score=103.68 Aligned_cols=173 Identities=17% Similarity=0.195 Sum_probs=115.1
Q ss_pred CCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCCCCC-------CCchhhHHHHHHHHhhhhhhhcCCcc
Q 043492 11 GKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLMPPK-------GNKEVDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
+..|.||++||..+++. ....++..+.+.||.|++++++|.+... ...+..|+.++++.+.+. .
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~----~--- 195 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKR----Y--- 195 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHh----C---
Confidence 56799999999997654 3477888889999999999999976543 245678999999986442 2
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC---C-----------------------
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH---S----------------------- 135 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~---~----------------------- 135 (278)
-..++..+|.||||.+...+.++..... .-+.|+..-+||+...... .
T Consensus 196 ---P~a~l~avG~S~Gg~iL~nYLGE~g~~~---~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r 269 (409)
T KOG1838|consen 196 ---PQAPLFAVGFSMGGNILTNYLGEEGDNT---PLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHR 269 (409)
T ss_pred ---CCCceEEEEecchHHHHHHHhhhccCCC---CceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhh
Confidence 2348999999999999999988755422 1234444555776210000 0
Q ss_pred ------------------------CCCCCcccc--------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccH
Q 043492 136 ------------------------ELDPPILDY--------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENH 177 (278)
Q Consensus 136 ------------------------~~~~~~~~~--------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~ 177 (278)
.+..+.+.+ .-.++++|+|+|++.+ |++.|.. .
T Consensus 270 ~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~D-------DPv~p~~--~ 340 (409)
T KOG1838|consen 270 HTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAAD-------DPVVPEE--A 340 (409)
T ss_pred hhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCC-------CCCCCcc--c
Confidence 000000111 0047999999999998 7777763 1
Q ss_pred HHHHHHhcCCcceeEEecCCCccccCCC
Q 043492 178 QQFFNRCTSSDRAHFDATYYGHMDVLDD 205 (278)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~H~~f~d~ 205 (278)
...-....+|...+++..-+||..|++.
T Consensus 341 ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 341 IPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred CCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 1122333455646777788999999765
No 87
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.37 E-value=1.8e-11 Score=111.87 Aligned_cols=89 Identities=15% Similarity=0.128 Sum_probs=61.3
Q ss_pred EEEecCCCC-CceEEEEeCCCCCCChhH-----HHHHHHHHHcCcEEEEeccCCCCCCCCCchhh-----HHHHHHHHhh
Q 043492 3 FIVFPDNQG-KYEVILFFPGTSVSNTSY-----SKLFDHLASHGYIVVSPQLYNLMPPKGNKEVD-----AAAEEINWLP 71 (278)
Q Consensus 3 ~i~~P~~~~-~~Pvvv~~hG~~~~~~~~-----~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~-----~~~~~~~~l~ 71 (278)
+-|.|..+. ..+.|+++||+......+ .+++++|+++||.|+++|+++.+.+....... .+.++++.+
T Consensus 177 i~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v- 255 (532)
T TIGR01838 177 IQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVV- 255 (532)
T ss_pred EEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHH-
Confidence 457776543 567899999997665544 48999999999999999998876544221111 122233332
Q ss_pred hhhhhcCCccccCCCCceEEEEeChhHHHH
Q 043492 72 KGLQSHLPENVVADLNYSALMGHSRGGLTA 101 (278)
Q Consensus 72 ~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a 101 (278)
.+ ..+.+++.++|||+||.++
T Consensus 256 ------~~---~~g~~kv~lvG~cmGGtl~ 276 (532)
T TIGR01838 256 ------EA---ITGEKQVNCVGYCIGGTLL 276 (532)
T ss_pred ------HH---hcCCCCeEEEEECcCcHHH
Confidence 11 1467799999999999985
No 88
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.36 E-value=2.9e-11 Score=102.71 Aligned_cols=112 Identities=23% Similarity=0.300 Sum_probs=81.3
Q ss_pred cEEEec--CCCCCceEEEEeCCCCCCChhHHHH----H------HHHHHcCcEEEEeccCCCCCCCCC------chhhHH
Q 043492 2 LFIVFP--DNQGKYEVILFFPGTSVSNTSYSKL----F------DHLASHGYIVVSPQLYNLMPPKGN------KEVDAA 63 (278)
Q Consensus 2 ~~i~~P--~~~~~~Pvvv~~hG~~~~~~~~~~l----~------~~Las~Gy~Vv~~d~~~~~~~~~~------~~~~~~ 63 (278)
+.||.| ...+++|+||..|+++.....-... . +.++++||+||+.|.+|.+.+.+. .+..|.
T Consensus 7 adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~ 86 (272)
T PF02129_consen 7 ADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDG 86 (272)
T ss_dssp EEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHH
T ss_pred EEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHH
Confidence 578999 7788999999999999654222221 1 239999999999999998766532 355788
Q ss_pred HHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 64 AEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 64 ~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
.++++|+.++ .-...+|+++|.|++|.+++.+|...+. .+++++...+..
T Consensus 87 ~d~I~W~~~Q---------pws~G~VGm~G~SY~G~~q~~~A~~~~p------~LkAi~p~~~~~ 136 (272)
T PF02129_consen 87 YDTIEWIAAQ---------PWSNGKVGMYGISYGGFTQWAAAARRPP------HLKAIVPQSGWS 136 (272)
T ss_dssp HHHHHHHHHC---------TTEEEEEEEEEETHHHHHHHHHHTTT-T------TEEEEEEESE-S
T ss_pred HHHHHHHHhC---------CCCCCeEEeeccCHHHHHHHHHHhcCCC------CceEEEecccCC
Confidence 8999997552 1234599999999999999999986554 688888766544
No 89
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.34 E-value=3.1e-10 Score=85.50 Aligned_cols=191 Identities=16% Similarity=0.134 Sum_probs=115.8
Q ss_pred EecCCCCCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCC--------CCCCCc--hhhHHHHHHHHhhh
Q 043492 5 VFPDNQGKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLM--------PPKGNK--EVDAAAEEINWLPK 72 (278)
Q Consensus 5 ~~P~~~~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~--------~~~~~~--~~~~~~~~~~~l~~ 72 (278)
+.|... ..-+||+.||.+++.+ .+...+..|+.+|+.|+-+++++.. ++.... +...+. .+.+
T Consensus 7 ~~pag~-~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~-~~aq--- 81 (213)
T COG3571 7 FDPAGP-APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIV-AIAQ--- 81 (213)
T ss_pred cCCCCC-CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHH-HHHH---
Confidence 344433 3347899999998764 6889999999999999999987642 111111 111111 2222
Q ss_pred hhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC-cCCCCCCCCCCCCCCccccCccCCCC
Q 043492 73 GLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD-PVAGIPYFHSELDPPILDYESFNFSI 151 (278)
Q Consensus 73 ~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (278)
+. ..++..++++.||||||-++-.++...-- .|.+++++. |+-..-.. .++ -+..-..+++
T Consensus 82 -l~------~~l~~gpLi~GGkSmGGR~aSmvade~~A------~i~~L~clgYPfhppGKP-e~~----Rt~HL~gl~t 143 (213)
T COG3571 82 -LR------AGLAEGPLIIGGKSMGGRVASMVADELQA------PIDGLVCLGYPFHPPGKP-EQL----RTEHLTGLKT 143 (213)
T ss_pred -HH------hcccCCceeeccccccchHHHHHHHhhcC------CcceEEEecCccCCCCCc-ccc----hhhhccCCCC
Confidence 22 23566789999999999999988876543 577777654 33322111 111 1111246899
Q ss_pred CeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHH
Q 043492 152 PVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMR 231 (278)
Q Consensus 152 P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (278)
|+||.+|+. |.+-.. ....- ..+..+. +++++++++|- . .+.... .+ ...+...
T Consensus 144 Ptli~qGtr-------D~fGtr--~~Va~-y~ls~~i-ev~wl~~adHD-L---kp~k~v----------sg-ls~~~hL 197 (213)
T COG3571 144 PTLITQGTR-------DEFGTR--DEVAG-YALSDPI-EVVWLEDADHD-L---KPRKLV----------SG-LSTADHL 197 (213)
T ss_pred CeEEeeccc-------ccccCH--HHHHh-hhcCCce-EEEEeccCccc-c---cccccc----------cc-ccHHHHH
Confidence 999999999 444221 11111 2233344 89999999994 2 111111 11 3456666
Q ss_pred HHhhHHHHHHHHH
Q 043492 232 QCVSGIAVAFLKA 244 (278)
Q Consensus 232 ~~~~~~~~afl~~ 244 (278)
+..++.+..|.++
T Consensus 198 ~~~A~~va~~~~~ 210 (213)
T COG3571 198 KTLAEQVAGWARR 210 (213)
T ss_pred HHHHHHHHHHHhh
Confidence 7788888888875
No 90
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.32 E-value=1e-11 Score=105.39 Aligned_cols=113 Identities=22% Similarity=0.184 Sum_probs=73.4
Q ss_pred CCceEEEEeCCCCCCC-hhH-HHHHHHHHH-cCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCC
Q 043492 11 GKYEVILFFPGTSVSN-TSY-SKLFDHLAS-HGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLN 87 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~-~~~-~~l~~~Las-~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~ 87 (278)
...|++|++|||+++. ..| ..+++.+.+ .+|.|+++|+++...+...........+.+.+.+-+..+.. ...++.+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~-~~g~~~~ 112 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVD-NTGLSLE 112 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHH-hcCCChH
Confidence 4578999999999887 444 455655544 68999999997753222111111111111221111222111 1135678
Q ss_pred ceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC
Q 043492 88 YSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
++.++||||||.+|..++...+. +++.+++++|....
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~------~v~~iv~LDPa~p~ 149 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNG------KLGRITGLDPAGPL 149 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcC------ccceeEEecCCccc
Confidence 99999999999999999998876 79999999988643
No 91
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.31 E-value=3.8e-11 Score=94.44 Aligned_cols=149 Identities=20% Similarity=0.180 Sum_probs=87.2
Q ss_pred EEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEE
Q 043492 16 ILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMG 93 (278)
Q Consensus 16 vv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~G 93 (278)
|+++||++++.. .+.++.++|.+. +.|-.++. . . .+..+.+..|.+.+.. + .+++.++|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~---~----~---P~~~~W~~~l~~~i~~-------~-~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW---D----N---PDLDEWVQALDQAIDA-------I-DEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-----T----S-----HHHHHHHHHHCCHC---------TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc---C----C---CCHHHHHHHHHHHHhh-------c-CCCeEEEE
Confidence 689999998764 568888899888 78777664 1 1 1223333332222221 2 34699999
Q ss_pred eChhHHHHHHHHh-hCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCcccc---CccCCCCCeEEEecCCCCCcCCCCC
Q 043492 94 HSRGGLTAFALAQ-GYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDY---ESFNFSIPVTVIGTGLGGLAKCVVP 169 (278)
Q Consensus 94 hS~GG~~a~~~a~-~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~P~Lii~g~~~~~~~~~d~ 169 (278)
||+|+.+++.++. .... +++++++++|+..... ....+....+ ....+.+|.++|.+++ |+
T Consensus 62 HSLGc~~~l~~l~~~~~~------~v~g~lLVAp~~~~~~--~~~~~~~~~f~~~p~~~l~~~~~viaS~n-------Dp 126 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQK------KVAGALLVAPFDPDDP--EPFPPELDGFTPLPRDPLPFPSIVIASDN-------DP 126 (171)
T ss_dssp ETHHHHHHHHHHHHTCCS------SEEEEEEES--SCGCH--HCCTCGGCCCTTSHCCHHHCCEEEEEETT-------BS
T ss_pred eCHHHHHHHHHHhhcccc------cccEEEEEcCCCcccc--cchhhhccccccCcccccCCCeEEEEcCC-------CC
Confidence 9999999999994 3333 8999999999876300 0111111111 1123567889999998 78
Q ss_pred CCCccccHHHHHHHhcCCcceeEEecCCCcccc
Q 043492 170 CAPEKENHQQFFNRCTSSDRAHFDATYYGHMDV 202 (278)
Q Consensus 170 ~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f 202 (278)
.+|.. ...++-+.+.. .++.++++||+.-
T Consensus 127 ~vp~~-~a~~~A~~l~a---~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 127 YVPFE-RAQRLAQRLGA---ELIILGGGGHFNA 155 (171)
T ss_dssp SS-HH-HHHHHHHHHT----EEEEETS-TTSSG
T ss_pred ccCHH-HHHHHHHHcCC---CeEECCCCCCccc
Confidence 88863 22233344433 5899999999844
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=99.30 E-value=6.2e-11 Score=95.55 Aligned_cols=164 Identities=15% Similarity=0.079 Sum_probs=102.4
Q ss_pred CCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCC---------CCCchhhHHHHHHHHhhhhhhhcCCc
Q 043492 10 QGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPP---------KGNKEVDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~~~~~ 80 (278)
....|+||++||+|++...+..+.+.+..+ +.++.+.-+-.... ...-+.++.......+.+.+.....
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~- 92 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE- 92 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH-
Confidence 346789999999999999999988888888 77777653221100 0111122222222222221222111
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEEecCC
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIGTGL 160 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~g~~ 160 (278)
...+|.++++++|+|.|+.+++.++...+. .++++++++|....... . ....-.+|+|+++|+.
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~------~~~~ail~~g~~~~~~~---~-------~~~~~~~pill~hG~~ 156 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPG------LFAGAILFSGMLPLEPE---L-------LPDLAGTPILLSHGTE 156 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCch------hhccchhcCCcCCCCCc---c-------ccccCCCeEEEeccCc
Confidence 234788999999999999999999999986 68888888876644221 0 1123578999999999
Q ss_pred CCCcCCCCCCCCccccHHHHHHHhc--CCcceeEEecCCCcc
Q 043492 161 GGLAKCVVPCAPEKENHQQFFNRCT--SSDRAHFDATYYGHM 200 (278)
Q Consensus 161 ~~~~~~~d~~~p~~~~~~~~~~~~~--~~~~~~~~~~g~~H~ 200 (278)
|++.|... ..+..+.++ .......+++ +||.
T Consensus 157 -------Dpvvp~~~-~~~l~~~l~~~g~~v~~~~~~-~GH~ 189 (207)
T COG0400 157 -------DPVVPLAL-AEALAEYLTASGADVEVRWHE-GGHE 189 (207)
T ss_pred -------CCccCHHH-HHHHHHHHHHcCCCEEEEEec-CCCc
Confidence 77766532 222222222 2221555556 8896
No 93
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.30 E-value=1e-11 Score=97.46 Aligned_cols=122 Identities=20% Similarity=0.345 Sum_probs=86.1
Q ss_pred EEEecCC---CCCceEEEEeCCCCCCChhHHH---HHHHHHHcCcEEEEeccCCCCCC-CCCc-----------------
Q 043492 3 FIVFPDN---QGKYEVILFFPGTSVSNTSYSK---LFDHLASHGYIVVSPQLYNLMPP-KGNK----------------- 58 (278)
Q Consensus 3 ~i~~P~~---~~~~Pvvv~~hG~~~~~~~~~~---l~~~Las~Gy~Vv~~d~~~~~~~-~~~~----------------- 58 (278)
-||.|.. .++.|+++|+.|+.+..+++.. +-++-++||++||.||..-.|-. .+.+
T Consensus 31 ~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~ 110 (283)
T KOG3101|consen 31 GVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQ 110 (283)
T ss_pred EEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEeccc
Confidence 3677763 4569999999999998887633 44566778999999997322210 0000
Q ss_pred hh-hHHHHHHHHhhhhhhhcCC-ccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC
Q 043492 59 EV-DAAAEEINWLPKGLQSHLP-ENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 59 ~~-~~~~~~~~~l~~~l~~~~~-~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
+. ..-.++-+++.+.+...+. ....+|+.++++.||||||+.|+-.+.+++. +.+.+-++.|...+
T Consensus 111 epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~------kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 111 EPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS------KYKSVSAFAPICNP 178 (283)
T ss_pred chHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc------cccceeccccccCc
Confidence 01 1123456666666655554 4556899999999999999999999998887 77888888877654
No 94
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.28 E-value=3.3e-10 Score=92.33 Aligned_cols=111 Identities=24% Similarity=0.367 Sum_probs=75.7
Q ss_pred EEEecCCC--CCceEEEEeCCCCCCChhHHHH--HHHHHH-cCcEEEEeccCCCC-----CC-------CCCchhhHHHH
Q 043492 3 FIVFPDNQ--GKYEVILFFPGTSVSNTSYSKL--FDHLAS-HGYIVVSPQLYNLM-----PP-------KGNKEVDAAAE 65 (278)
Q Consensus 3 ~i~~P~~~--~~~Pvvv~~hG~~~~~~~~~~l--~~~Las-~Gy~Vv~~d~~~~~-----~~-------~~~~~~~~~~~ 65 (278)
.+|.|... ++.|+||++||.+++...+... ...||+ +||+|+.|+..... .. ....+...+..
T Consensus 4 ~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~ 83 (220)
T PF10503_consen 4 RLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAA 83 (220)
T ss_pred EEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHH
Confidence 57889743 4689999999999988765432 234555 59999999853211 10 01122333444
Q ss_pred HHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 66 EINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 66 ~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
+++++.+ ...+|.+||.+.|+|.||.++..++..+|+ .+.++...+..
T Consensus 84 lv~~v~~--------~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd------~faa~a~~sG~ 131 (220)
T PF10503_consen 84 LVDYVAA--------RYNIDPSRVYVTGLSNGGMMANVLACAYPD------LFAAVAVVSGV 131 (220)
T ss_pred HHHhHhh--------hcccCCCceeeEEECHHHHHHHHHHHhCCc------cceEEEeeccc
Confidence 4444322 456899999999999999999999999998 56666655443
No 95
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.27 E-value=3.9e-11 Score=106.86 Aligned_cols=111 Identities=16% Similarity=0.091 Sum_probs=71.4
Q ss_pred CceEEEEeCCCCCCC--hhHH-HHHHHHHHc--CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCC
Q 043492 12 KYEVILFFPGTSVSN--TSYS-KLFDHLASH--GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADL 86 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~--~~~~-~l~~~Las~--Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~ 86 (278)
..|++|++||++.+. ..|. .+++.|.+. .|.|+++|+++.+.+...........+-+.+.+-++.+.+. ..++.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~-~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEE-FNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHh-hCCCC
Confidence 578999999998754 2343 356655432 59999999998764432211111111111111111111111 12578
Q ss_pred CceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 87 NYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
+++.|+||||||++|..++...+. +++.+++++|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~------rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKH------KVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCc------ceeEEEEEcCCCC
Confidence 899999999999999999987775 7999999999764
No 96
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.27 E-value=1.4e-10 Score=92.10 Aligned_cols=183 Identities=16% Similarity=0.191 Sum_probs=118.6
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCC--CCCC--------------chhhHHHHHHHHhhhhhhh
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMP--PKGN--------------KEVDAAAEEINWLPKGLQS 76 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~--~~~~--------------~~~~~~~~~~~~l~~~l~~ 76 (278)
.-+|++.-=+|.+-..-...+..+|..||.|++||+.+-.+ ++.. ..-.++..++.||..
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~---- 115 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKN---- 115 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHH----
Confidence 44566666666666778999999999999999999844211 1100 112345556666532
Q ss_pred cCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEE
Q 043492 77 HLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVI 156 (278)
Q Consensus 77 ~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii 156 (278)
.-+..+|+++|++|||..+..+....+ .+.+++.+.|.....- +..++++|+|++
T Consensus 116 ------~g~~kkIGv~GfCwGak~vv~~~~~~~-------~f~a~v~~hps~~d~~------------D~~~vk~Pilfl 170 (242)
T KOG3043|consen 116 ------HGDSKKIGVVGFCWGAKVVVTLSAKDP-------EFDAGVSFHPSFVDSA------------DIANVKAPILFL 170 (242)
T ss_pred ------cCCcceeeEEEEeecceEEEEeeccch-------hheeeeEecCCcCChh------------HHhcCCCCEEEE
Confidence 235679999999999999998888776 5788888776543211 225689999999
Q ss_pred ecCCCCCcCCCCCCCCccccHHHHH-HHhcCCc---ceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHH
Q 043492 157 GTGLGGLAKCVVPCAPEKENHQQFF-NRCTSSD---RAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQ 232 (278)
Q Consensus 157 ~g~~~~~~~~~d~~~p~~~~~~~~~-~~~~~~~---~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (278)
.++. |...|.. -...+ +.+.... .++.+++|.+|. |+.... + +| . .+.+...+
T Consensus 171 ~ae~-------D~~~p~~--~v~~~ee~lk~~~~~~~~v~~f~g~~HG-f~~~r~---------~-~~-~--Ped~~~~e 227 (242)
T KOG3043|consen 171 FAEL-------DEDVPPK--DVKAWEEKLKENPAVGSQVKTFSGVGHG-FVARRA---------N-IS-S--PEDKKAAE 227 (242)
T ss_pred eecc-------cccCCHH--HHHHHHHHHhcCcccceeEEEcCCccch-hhhhcc---------C-CC-C--hhHHHHHH
Confidence 9998 6666653 22233 3333222 268999999997 543211 0 11 1 12334445
Q ss_pred HhhHHHHHHHHHHhc
Q 043492 233 CVSGIAVAFLKAYFD 247 (278)
Q Consensus 233 ~~~~~~~afl~~~l~ 247 (278)
......+.||..|+.
T Consensus 228 ea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 228 EAYQRFISWFKHYLA 242 (242)
T ss_pred HHHHHHHHHHHHhhC
Confidence 666778999998863
No 97
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.22 E-value=3.7e-10 Score=111.97 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=63.3
Q ss_pred EEEecCCC-----CCceEEEEeCCCCCCChhHHHH-----HHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhh
Q 043492 3 FIVFPDNQ-----GKYEVILFFPGTSVSNTSYSKL-----FDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPK 72 (278)
Q Consensus 3 ~i~~P~~~-----~~~Pvvv~~hG~~~~~~~~~~l-----~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~ 72 (278)
+-|.|..+ ...|.||++||+..+...|... .+.|+++||.|+++|+...+.+... ...++.+.+..+.+
T Consensus 52 ~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~~~~~~~~-~~~~l~~~i~~l~~ 130 (994)
T PRK07868 52 RRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFGSPDKVEGG-MERNLADHVVALSE 130 (994)
T ss_pred EEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCCCCChhHcC-ccCCHHHHHHHHHH
Confidence 34666542 3558999999999988887654 8999999999999996322211111 01222222222222
Q ss_pred hhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhC
Q 043492 73 GLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 73 ~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
.+..+.. ...+++.++||||||.+++.++..+
T Consensus 131 ~l~~v~~----~~~~~v~lvG~s~GG~~a~~~aa~~ 162 (994)
T PRK07868 131 AIDTVKD----VTGRDVHLVGYSQGGMFCYQAAAYR 162 (994)
T ss_pred HHHHHHH----hhCCceEEEEEChhHHHHHHHHHhc
Confidence 2221110 1235899999999999998887643
No 98
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.22 E-value=1.6e-10 Score=109.18 Aligned_cols=97 Identities=19% Similarity=0.170 Sum_probs=67.4
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCC----------chh-------------hHHHHHHH
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGN----------KEV-------------DAAAEEIN 68 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~----------~~~-------------~~~~~~~~ 68 (278)
.+|+|||+||++++...|..+++.|+++||.|+++||+|+|.+... ... ..+++.+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 4689999999999999999999999999999999999998765221 000 02222222
Q ss_pred Hhh---hhhhhc------CCccccCCCCceEEEEeChhHHHHHHHHhhC
Q 043492 69 WLP---KGLQSH------LPENVVADLNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 69 ~l~---~~l~~~------~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
++. ..++.. +......+..++.++||||||.+++.++...
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 221 112210 0011225678999999999999999998753
No 99
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.20 E-value=3.7e-10 Score=91.42 Aligned_cols=93 Identities=20% Similarity=0.176 Sum_probs=76.3
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceE
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSA 90 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~ 90 (278)
+..+-++++|=.||+...|..|.+.|... ..+++++++|.+..-......++..+.+.+...+.. . .-...++
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~-~-----~~d~P~a 77 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLLTDIESLADELANELLP-P-----LLDAPFA 77 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCcccccHHHHHHHHHHHhcc-c-----cCCCCee
Confidence 45678999999999999999999999886 999999999987766666778888888887666552 0 1234899
Q ss_pred EEEeChhHHHHHHHHhhCCC
Q 043492 91 LMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 91 l~GhS~GG~~a~~~a~~~~~ 110 (278)
++||||||++|..+|....+
T Consensus 78 lfGHSmGa~lAfEvArrl~~ 97 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLER 97 (244)
T ss_pred ecccchhHHHHHHHHHHHHH
Confidence 99999999999999987543
No 100
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=6.1e-10 Score=106.33 Aligned_cols=176 Identities=18% Similarity=0.161 Sum_probs=112.4
Q ss_pred EEecC---CCCCceEEEEeCCCCCCCh----hHHHHHH-HHHHcCcEEEEeccCCCCCCCCC-----------chhhHHH
Q 043492 4 IVFPD---NQGKYEVILFFPGTSVSNT----SYSKLFD-HLASHGYIVVSPQLYNLMPPKGN-----------KEVDAAA 64 (278)
Q Consensus 4 i~~P~---~~~~~Pvvv~~hG~~~~~~----~~~~l~~-~Las~Gy~Vv~~d~~~~~~~~~~-----------~~~~~~~ 64 (278)
+..|. ..+++|++|.+||+.++.. ....+.. .+.+.|++|+.+|.+|.+..+.. .++.|..
T Consensus 514 ~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~ 593 (755)
T KOG2100|consen 514 LILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQI 593 (755)
T ss_pred EecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHH
Confidence 45564 4568999999999997332 2223333 46778999999999998754422 1233333
Q ss_pred HHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC-----CC--C
Q 043492 65 EEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH-----SE--L 137 (278)
Q Consensus 65 ~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~-----~~--~ 137 (278)
.++.+ +++.. .+|.+||+++|+|.||.+++..+..++.. -++..++++|+....+-. .. +
T Consensus 594 ~~~~~-------~~~~~-~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-----~fkcgvavaPVtd~~~yds~~terymg~ 660 (755)
T KOG2100|consen 594 EAVKK-------VLKLP-FIDRSRVAIWGWSYGGYLTLKLLESDPGD-----VFKCGVAVAPVTDWLYYDSTYTERYMGL 660 (755)
T ss_pred HHHHH-------HHhcc-cccHHHeEEeccChHHHHHHHHhhhCcCc-----eEEEEEEecceeeeeeecccccHhhcCC
Confidence 33333 23333 68999999999999999999999988631 456669999988543211 00 0
Q ss_pred CCCccc-c-------CccCCCCCe-EEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCc--ceeEEecCCCcc
Q 043492 138 DPPILD-Y-------ESFNFSIPV-TVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSD--RAHFDATYYGHM 200 (278)
Q Consensus 138 ~~~~~~-~-------~~~~~~~P~-Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~--~~~~~~~g~~H~ 200 (278)
+..... | ...+++.|. |++||+.| .-+.. ++..++++.+.... -.++++++.+|.
T Consensus 661 p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~D-------dnVh~-q~s~~~~~aL~~~gv~~~~~vypde~H~ 726 (755)
T KOG2100|consen 661 PSENDKGYEESSVSSPANNIKTPKLLLIHGTED-------DNVHF-QQSAILIKALQNAGVPFRLLVYPDENHG 726 (755)
T ss_pred CccccchhhhccccchhhhhccCCEEEEEcCCc-------CCcCH-HHHHHHHHHHHHCCCceEEEEeCCCCcc
Confidence 000000 1 123566666 88899994 33332 34556676665332 288999999997
No 101
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.17 E-value=8.9e-10 Score=105.48 Aligned_cols=91 Identities=18% Similarity=0.184 Sum_probs=64.3
Q ss_pred HHHHHHHHcCcEEEEeccCCCCCCCC------CchhhHHHHHHHHhhhhhhhcCCc------cccCCCCceEEEEeChhH
Q 043492 31 KLFDHLASHGYIVVSPQLYNLMPPKG------NKEVDAAAEEINWLPKGLQSHLPE------NVVADLNYSALMGHSRGG 98 (278)
Q Consensus 31 ~l~~~Las~Gy~Vv~~d~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~------~~~~d~~~i~l~GhS~GG 98 (278)
.+.+.|+++||+|+..|.+|.+.+.+ ..+..+..++++|+..+.....+. +..=-..+|+++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 56789999999999999999876553 334567888999976421110110 000113699999999999
Q ss_pred HHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 99 LTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 99 ~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
.+++.+|...+. .++++|...++
T Consensus 350 ~~~~~aAa~~pp------~LkAIVp~a~i 372 (767)
T PRK05371 350 TLPNAVATTGVE------GLETIIPEAAI 372 (767)
T ss_pred HHHHHHHhhCCC------cceEEEeeCCC
Confidence 999999887664 57777776554
No 102
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.17 E-value=3.1e-10 Score=92.73 Aligned_cols=165 Identities=19% Similarity=0.225 Sum_probs=87.1
Q ss_pred hhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC----C
Q 043492 60 VDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH----S 135 (278)
Q Consensus 60 ~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~----~ 135 (278)
.+.++++++||.+ ...++.++|+|+|.|.||-+|+.+|...+ .++++|+++|......+. .
T Consensus 3 LEyfe~Ai~~L~~--------~p~v~~~~Igi~G~SkGaelALllAs~~~-------~i~avVa~~ps~~~~~~~~~~~~ 67 (213)
T PF08840_consen 3 LEYFEEAIDWLKS--------HPEVDPDKIGIIGISKGAELALLLASRFP-------QISAVVAISPSSVVFQGIGFYRD 67 (213)
T ss_dssp CHHHHHHHHHHHC--------STTB--SSEEEEEETHHHHHHHHHHHHSS-------SEEEEEEES--SB--SSEEEETT
T ss_pred hHHHHHHHHHHHh--------CCCCCCCCEEEEEECHHHHHHHHHHhcCC-------CccEEEEeCCceeEecchhcccC
Confidence 3567788888654 34578889999999999999999999998 588898888765332110 0
Q ss_pred C---CC-------------CCcc--cc---------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHH
Q 043492 136 E---LD-------------PPIL--DY---------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFN 182 (278)
Q Consensus 136 ~---~~-------------~~~~--~~---------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~ 182 (278)
. ++ +..+ .+ .-.+++.|+|+|+|++ |.+.|........-+
T Consensus 68 ~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~d-------D~~WpS~~~a~~i~~ 140 (213)
T PF08840_consen 68 SSKPLPYLPFDISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGED-------DQIWPSSEMAEQIEE 140 (213)
T ss_dssp E--EE----B-GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT--------SSS-HHHHHHHHHH
T ss_pred CCccCCcCCcChhhceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCC-------CCccchHHHHHHHHH
Confidence 0 00 0000 00 1146899999999999 777776443333445
Q ss_pred HhcCCc----ceeEEecCCCccccCCCCCcchhhhc--ccccccCCCC--CCchhHHHHhhHHHHHHHHHHhc
Q 043492 183 RCTSSD----RAHFDATYYGHMDVLDDCPPDLKSLA--ISKCMCTNGT--LPRQPMRQCVSGIAVAFLKAYFD 247 (278)
Q Consensus 183 ~~~~~~----~~~~~~~g~~H~~f~d~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~afl~~~l~ 247 (278)
+++... .+.+.++++||+-.....+ ...... .......-|+ ..-.+.++....-++.||+.+|.
T Consensus 141 rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P-~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 141 RLKAAGFPHNVEHLSYPGAGHLIEPPYFP-HCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHCTT-----EEEEETTB-S---STT------EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHhCCCCcceEEEcCCCCceecCCCCC-CcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 554321 2678899999983221111 011000 0000011121 12233556677889999999986
No 103
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.12 E-value=1.6e-09 Score=85.64 Aligned_cols=168 Identities=15% Similarity=0.177 Sum_probs=105.0
Q ss_pred CCCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCCCCCC-------CchhhHHHHHHHHhhhhhhhcCCc
Q 043492 10 QGKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLMPPKG-------NKEVDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~ 80 (278)
.+...+||++||+..+.. .+..+|..|++.||-++-+|+.|.|.+.+ .....|+..+++.+.. .+.
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~-~nr---- 104 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSN-SNR---- 104 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhcc-Cce----
Confidence 356679999999997654 56888999999999999999999876542 2334566666666422 221
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCC-----CCCccc------------------ceEEecCcCCCCCCCCCCC
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNP-----PLGLKF------------------SALVGVDPVAGIPYFHSEL 137 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~-----~~~~~~------------------~a~v~~~p~~~~~~~~~~~ 137 (278)
.=-+++|||-||.+++.++.++.... ..+... ++.+...|..+- ++ ..+
T Consensus 105 ------~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~-y~-~rv 176 (269)
T KOG4667|consen 105 ------VVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGK-YG-YRV 176 (269)
T ss_pred ------EEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCC-cC-cee
Confidence 12368899999999999999887521 111111 112211111110 00 000
Q ss_pred CCCcccc----------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 138 DPPILDY----------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 138 ~~~~~~~----------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
.+..+.. -.-...+|+|-++|.. |.++|.. ...++.+.+++ . .+.+++|++|.
T Consensus 177 t~eSlmdrLntd~h~aclkId~~C~VLTvhGs~-------D~IVPve-~AkefAk~i~n-H-~L~iIEgADHn 239 (269)
T KOG4667|consen 177 TEESLMDRLNTDIHEACLKIDKQCRVLTVHGSE-------DEIVPVE-DAKEFAKIIPN-H-KLEIIEGADHN 239 (269)
T ss_pred cHHHHHHHHhchhhhhhcCcCccCceEEEeccC-------Cceeech-hHHHHHHhccC-C-ceEEecCCCcC
Confidence 0111000 0023569999999999 8888863 33444455555 4 78999999997
No 104
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.11 E-value=2.3e-10 Score=94.51 Aligned_cols=155 Identities=21% Similarity=0.279 Sum_probs=92.4
Q ss_pred cEEEecCC---CCCc-eEEEEeCCCCCCChh-HHHHH-------HHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHH
Q 043492 2 LFIVFPDN---QGKY-EVILFFPGTSVSNTS-YSKLF-------DHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINW 69 (278)
Q Consensus 2 ~~i~~P~~---~~~~-Pvvv~~hG~~~~~~~-~~~l~-------~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~ 69 (278)
..+|.|++ .+++ |+|+|+||.|..... +..+. ...-+.++-|++|.+...-..............++.
T Consensus 176 Yrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idl 255 (387)
T COG4099 176 YRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDL 255 (387)
T ss_pred EEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHHHHHHH
Confidence 35677852 3455 999999999965443 32221 222334566777764321110111111112223333
Q ss_pred hhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCC
Q 043492 70 LPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNF 149 (278)
Q Consensus 70 l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 149 (278)
+.+.+.....+|.+||.++|.|+||..++.++.+.|+ .+.+.+.++.-..... + ....-
T Consensus 256 ----i~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd------fFAaa~~iaG~~d~v~----l-------v~~lk 314 (387)
T COG4099 256 ----ILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD------FFAAAVPIAGGGDRVY----L-------VRTLK 314 (387)
T ss_pred ----HHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch------hhheeeeecCCCchhh----h-------hhhhc
Confidence 3334445678999999999999999999999999997 6778877664332100 1 01124
Q ss_pred CCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhc
Q 043492 150 SIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCT 185 (278)
Q Consensus 150 ~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~ 185 (278)
+.|+.++|+++ |...|.. +..-.|.+++
T Consensus 315 ~~piWvfhs~d-------Dkv~Pv~-nSrv~y~~lk 342 (387)
T COG4099 315 KAPIWVFHSSD-------DKVIPVS-NSRVLYERLK 342 (387)
T ss_pred cCceEEEEecC-------CCccccC-cceeehHHHH
Confidence 68999999999 6666653 3333454443
No 105
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.10 E-value=6.8e-10 Score=91.05 Aligned_cols=111 Identities=21% Similarity=0.186 Sum_probs=74.0
Q ss_pred CCCceEEEEeCCCCCCChhHHHHHHHHHHc-CcEEEEeccCCCCCCCCCchh-hHHHHHHHHhhhhhhhcCCccccCCCC
Q 043492 10 QGKYEVILFFPGTSVSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPKGNKEV-DAAAEEINWLPKGLQSHLPENVVADLN 87 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~d~~ 87 (278)
....|++++.||+|.+.-+|..++.+|.+. -.+|+++|.+|++........ .+.+.++..+..-++++.. -...
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fg----e~~~ 146 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFG----ELPP 146 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhc----cCCC
Confidence 457899999999999999999999999886 567788999999865532211 1122222221111222221 1456
Q ss_pred ceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 88 YSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
+|.|+||||||.+|...+....- + .+.+++.+|=+.+
T Consensus 147 ~iilVGHSmGGaIav~~a~~k~l-p----sl~Gl~viDVVEg 183 (343)
T KOG2564|consen 147 QIILVGHSMGGAIAVHTAASKTL-P----SLAGLVVIDVVEG 183 (343)
T ss_pred ceEEEeccccchhhhhhhhhhhc-h----hhhceEEEEEech
Confidence 79999999999999877765422 1 4566666665543
No 106
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1.8e-09 Score=97.39 Aligned_cols=112 Identities=27% Similarity=0.364 Sum_probs=81.2
Q ss_pred EEEecCC---CCCceEEEEeCCCCCCCh--------hHHHHHHHHHHcCcEEEEeccCCCCCCC-----------CCchh
Q 043492 3 FIVFPDN---QGKYEVILFFPGTSVSNT--------SYSKLFDHLASHGYIVVSPQLYNLMPPK-----------GNKEV 60 (278)
Q Consensus 3 ~i~~P~~---~~~~Pvvv~~hG~~~~~~--------~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----------~~~~~ 60 (278)
-||.|.+ .+++|+|+++-|+.+-.. .|-. ...||+.||+|+.+|.+|+...+ +..++
T Consensus 629 miyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR-~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~ 707 (867)
T KOG2281|consen 629 MIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR-FCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEV 707 (867)
T ss_pred EEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhh-hhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeee
Confidence 4678864 457999999999986322 2222 35699999999999999975433 12334
Q ss_pred hHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 61 DAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 61 ~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
+|--+.+.||.+ ..+-+|++||++-|.|+||++++....++|+ -++..|+=.|+.
T Consensus 708 eDQVeglq~Lae-------q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~------IfrvAIAGapVT 762 (867)
T KOG2281|consen 708 EDQVEGLQMLAE-------QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN------IFRVAIAGAPVT 762 (867)
T ss_pred hhhHHHHHHHHH-------hcCcccchheeEeccccccHHHHHHhhcCcc------eeeEEeccCcce
Confidence 444555555533 2445899999999999999999999999997 466677666655
No 107
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.99 E-value=1.5e-09 Score=90.93 Aligned_cols=121 Identities=21% Similarity=0.287 Sum_probs=76.1
Q ss_pred cEEEecCC---CCCceEEEEeCCCCCCCh--hHHHHHHHHHHcC----cEEEEeccCCCCC--C---------CCCchhh
Q 043492 2 LFIVFPDN---QGKYEVILFFPGTSVSNT--SYSKLFDHLASHG----YIVVSPQLYNLMP--P---------KGNKEVD 61 (278)
Q Consensus 2 ~~i~~P~~---~~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~G----y~Vv~~d~~~~~~--~---------~~~~~~~ 61 (278)
+.||.|.+ .+++|||+++||...... ......+.+...| .++|+++..+... . .......
T Consensus 10 ~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (251)
T PF00756_consen 10 VWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSG 89 (251)
T ss_dssp EEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTT
T ss_pred EEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCC
Confidence 57899976 568999999999722111 2334455555554 5566666543320 0 0001111
Q ss_pred HHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 62 AAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 62 ~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
......+++.+++...++...+++.++.+|+|+||||..|+.++.++|+ .++++++++|..
T Consensus 90 ~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd------~F~~~~~~S~~~ 150 (251)
T PF00756_consen 90 GGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD------LFGAVIAFSGAL 150 (251)
T ss_dssp THHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT------TESEEEEESEES
T ss_pred CCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc------ccccccccCccc
Confidence 2233344444444444444444555559999999999999999999998 799999999764
No 108
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.99 E-value=4.2e-09 Score=88.79 Aligned_cols=111 Identities=18% Similarity=0.229 Sum_probs=67.7
Q ss_pred CceEEEEeCCCCC---CChhHHHHHHHHHHcCcEEEEeccC----CCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccC
Q 043492 12 KYEVILFFPGTSV---SNTSYSKLFDHLASHGYIVVSPQLY----NLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVA 84 (278)
Q Consensus 12 ~~Pvvv~~hG~~~---~~~~~~~l~~~Las~Gy~Vv~~d~~----~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 84 (278)
...+|||+.|++. +......|++.|.+.||.|+.+... |.|...-..++.++.+++.+|... + .+..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~-~-----~g~~ 105 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSE-K-----GGHF 105 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHH-S---------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHh-h-----cccc
Confidence 4558999999984 4456789999998899999998864 334444456677888888886541 1 1123
Q ss_pred CCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
..++|+|+|||-|..-++.++...... ..+..+.++|+..|+..
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~-~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPS-PSRPPVDGAILQAPVSD 149 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT----CCCEEEEEEEEE---
T ss_pred CCccEEEEecCCCcHHHHHHHhccCcc-ccccceEEEEEeCCCCC
Confidence 578999999999999999999865421 11236888888888763
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.99 E-value=2.5e-08 Score=79.41 Aligned_cols=148 Identities=20% Similarity=0.158 Sum_probs=84.6
Q ss_pred EEEeCCCCCCChhH--HHHHHHHHHcCc--EEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 16 ILFFPGTSVSNTSY--SKLFDHLASHGY--IVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 16 vv~~hG~~~~~~~~--~~l~~~Las~Gy--~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
|+|+||+.+++.+. ..+.+.++.+|. .+.+++.+.. + ..+++.+.+-+.. ...+.+.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------p---~~a~~~l~~~i~~-------~~~~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------P---EEAIAQLEQLIEE-------LKPENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------H---HHHHHHHHHHHHh-------CCCCCeEE
Confidence 79999999988654 566788888864 4455553221 1 2222222221222 23345999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCC------CCCC--CCCCcccc-------------CccCCC
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPY------FHSE--LDPPILDY-------------ESFNFS 150 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~------~~~~--~~~~~~~~-------------~~~~~~ 150 (278)
+|.||||..|..++..+. +++ ++++|...+.. +... .+...+.. ....-.
T Consensus 64 iGSSlGG~~A~~La~~~~--------~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~ 134 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG--------LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNP 134 (187)
T ss_pred EEEChHHHHHHHHHHHhC--------CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCC
Confidence 999999999999998775 344 66677664210 1000 00001100 012234
Q ss_pred CCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCC
Q 043492 151 IPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLD 204 (278)
Q Consensus 151 ~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d 204 (278)
.+++++.++. |...+ +.+.+....+. ..++.+|++|- |.+
T Consensus 135 ~~~lvll~~~-------DEvLd----~~~a~~~~~~~--~~~i~~ggdH~-f~~ 174 (187)
T PF05728_consen 135 ERYLVLLQTG-------DEVLD----YREAVAKYRGC--AQIIEEGGDHS-FQD 174 (187)
T ss_pred ccEEEEEecC-------CcccC----HHHHHHHhcCc--eEEEEeCCCCC-Ccc
Confidence 6899999998 55544 34444444433 34567888996 543
No 110
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.98 E-value=2.2e-09 Score=73.11 Aligned_cols=67 Identities=21% Similarity=0.283 Sum_probs=54.1
Q ss_pred EEEecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCC-CchhhHHHHHHHHh
Q 043492 3 FIVFPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKG-NKEVDAAAEEINWL 70 (278)
Q Consensus 3 ~i~~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~-~~~~~~~~~~~~~l 70 (278)
..|.|+.+ ++.+|+++||++.....|..+++.|+++||.|+++|++|+|.+.. .........+++.+
T Consensus 7 ~~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~ 74 (79)
T PF12146_consen 7 RRWKPENP-PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDL 74 (79)
T ss_pred EEecCCCC-CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHH
Confidence 45667765 788999999999999999999999999999999999999987763 33444555555543
No 111
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.98 E-value=5.3e-09 Score=93.52 Aligned_cols=119 Identities=13% Similarity=0.200 Sum_probs=77.1
Q ss_pred cEEEecCC--CCCceEEEEeCCCCCCCh-hHHHHHHHHHHcC----cEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhh
Q 043492 2 LFIVFPDN--QGKYEVILFFPGTSVSNT-SYSKLFDHLASHG----YIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGL 74 (278)
Q Consensus 2 ~~i~~P~~--~~~~Pvvv~~hG~~~~~~-~~~~l~~~Las~G----y~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l 74 (278)
+.||.|.. .+++|||+++||...... .....++.|...| .+|+.+|....... ...........++|.+++
T Consensus 196 v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R--~~el~~~~~f~~~l~~eL 273 (411)
T PRK10439 196 VWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHR--SQELPCNADFWLAVQQEL 273 (411)
T ss_pred EEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccc--cccCCchHHHHHHHHHHH
Confidence 57899864 468999999999764322 3445666777777 44677875321111 111111223344443433
Q ss_pred hhcCCccc--cCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 75 QSHLPENV--VADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 75 ~~~~~~~~--~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
...++... ..|.++.+|+|+||||..|+.++..+|+ .+..+++++|..
T Consensus 274 lP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 274 LPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPE------RFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcc------cccEEEEeccce
Confidence 33333222 2477899999999999999999999998 899999999753
No 112
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.97 E-value=4.9e-09 Score=85.85 Aligned_cols=71 Identities=24% Similarity=0.323 Sum_probs=52.3
Q ss_pred cEEEEeccCCCCCCCC---C-c---hhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCC
Q 043492 41 YIVVSPQLYNLMPPKG---N-K---EVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPP 113 (278)
Q Consensus 41 y~Vv~~d~~~~~~~~~---~-~---~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~ 113 (278)
|.|+++|.+|.+.+.. . . ...+..+.++.+.+ .+..+++.++||||||.+++.++..+|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--- 67 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALRE----------ALGIKKINLVGHSMGGMLALEYAAQYPE--- 67 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHH----------HHTTSSEEEEEETHHHHHHHHHHHHSGG---
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHH----------HhCCCCeEEEEECCChHHHHHHHHHCch---
Confidence 6899999999987663 1 1 12233333333222 1355679999999999999999999997
Q ss_pred CCcccceEEecCcC
Q 043492 114 LGLKFSALVGVDPV 127 (278)
Q Consensus 114 ~~~~~~a~v~~~p~ 127 (278)
++++++++++.
T Consensus 68 ---~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ---RVKKLVLISPP 78 (230)
T ss_dssp ---GEEEEEEESES
T ss_pred ---hhcCcEEEeee
Confidence 89999998885
No 113
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.96 E-value=8.5e-09 Score=85.59 Aligned_cols=101 Identities=22% Similarity=0.239 Sum_probs=71.3
Q ss_pred cEEEecCC-CCCceEEEEeCCCCCCChhHHHHH--HHHHH-cCcEEEEeccCCCCC-CC-------------CCchhhHH
Q 043492 2 LFIVFPDN-QGKYEVILFFPGTSVSNTSYSKLF--DHLAS-HGYIVVSPQLYNLMP-PK-------------GNKEVDAA 63 (278)
Q Consensus 2 ~~i~~P~~-~~~~Pvvv~~hG~~~~~~~~~~l~--~~Las-~Gy~Vv~~d~~~~~~-~~-------------~~~~~~~~ 63 (278)
..+|.|.. ..+.|+||++||.+++...+.... +.||+ .||.|+.||-..... .+ ..+++..+
T Consensus 49 y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgfl 128 (312)
T COG3509 49 YRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFL 128 (312)
T ss_pred eEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHH
Confidence 46788864 345599999999999988777666 66666 599999997533211 11 11223333
Q ss_pred HHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 64 AEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 64 ~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
.+++..|. .+..+|.+||.+.|.|.||.++..++...+.
T Consensus 129 r~lva~l~--------~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~ 167 (312)
T COG3509 129 RALVAKLV--------NEYGIDPARVYVTGLSNGGRMANRLACEYPD 167 (312)
T ss_pred HHHHHHHH--------HhcCcCcceEEEEeeCcHHHHHHHHHhcCcc
Confidence 34444332 2456899999999999999999999999886
No 114
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.95 E-value=3.2e-09 Score=94.06 Aligned_cols=101 Identities=21% Similarity=0.234 Sum_probs=77.2
Q ss_pred cEEEecC-CCCCceEEEEeCCCC---CCChhHHHHHHHHHHcC-cEEEEeccC-CC-CC---CC--------CCchhhHH
Q 043492 2 LFIVFPD-NQGKYEVILFFPGTS---VSNTSYSKLFDHLASHG-YIVVSPQLY-NL-MP---PK--------GNKEVDAA 63 (278)
Q Consensus 2 ~~i~~P~-~~~~~Pvvv~~hG~~---~~~~~~~~l~~~Las~G-y~Vv~~d~~-~~-~~---~~--------~~~~~~~~ 63 (278)
+.||.|. ...+.||+||+||++ |+......=...||..| ++||+++|+ |. |. +. ......|.
T Consensus 82 LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~Dq 161 (491)
T COG2272 82 LNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQ 161 (491)
T ss_pred EEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHH
Confidence 3589998 666889999999998 56666556678899999 999999985 32 21 10 11246678
Q ss_pred HHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhh
Q 043492 64 AEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 64 ~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
.-++.|+.++|..+ .-|+++|.|+|+|.|++.++.++..
T Consensus 162 ilALkWV~~NIe~F-----GGDp~NVTl~GeSAGa~si~~Lla~ 200 (491)
T COG2272 162 ILALKWVRDNIEAF-----GGDPQNVTLFGESAGAASILTLLAV 200 (491)
T ss_pred HHHHHHHHHHHHHh-----CCCccceEEeeccchHHHHHHhhcC
Confidence 88899988877763 2589999999999999988877654
No 115
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.94 E-value=3e-08 Score=83.76 Aligned_cols=95 Identities=18% Similarity=0.149 Sum_probs=68.2
Q ss_pred ecCCCCCceEEEEeCCCCCCChhHHHHHHHHHHc-CcEEEEeccCCCCCCCCCc------hhhHHHHHHHHhhhhhhhcC
Q 043492 6 FPDNQGKYEVILFFPGTSVSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPKGNK------EVDAAAEEINWLPKGLQSHL 78 (278)
Q Consensus 6 ~P~~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~~~------~~~~~~~~~~~l~~~l~~~~ 78 (278)
...+..+.|.++++||+-|+...|..+++.|+.. |-.|+++|.+.+|.+.... ...|+...+++. .
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v----~--- 117 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGV----G--- 117 (315)
T ss_pred cccccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHc----c---
Confidence 4445568899999999999999999999999986 8899999998887654221 112222233321 1
Q ss_pred CccccCCCCceEEEEeChhH-HHHHHHHhhCCC
Q 043492 79 PENVVADLNYSALMGHSRGG-LTAFALAQGYAT 110 (278)
Q Consensus 79 ~~~~~~d~~~i~l~GhS~GG-~~a~~~a~~~~~ 110 (278)
+..-..++.++|||||| .+++..+...+.
T Consensus 118 ---~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~ 147 (315)
T KOG2382|consen 118 ---GSTRLDPVVLLGHSMGGVKVAMAETLKKPD 147 (315)
T ss_pred ---cccccCCceecccCcchHHHHHHHHHhcCc
Confidence 01134589999999999 777777777775
No 116
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.89 E-value=3.9e-08 Score=87.46 Aligned_cols=101 Identities=23% Similarity=0.319 Sum_probs=62.8
Q ss_pred CCceEEEEeCCCCCCChh-------------HHHHH---HHHHHcCcEEEEeccCCCCC---------------CC-CC-
Q 043492 11 GKYEVILFFPGTSVSNTS-------------YSKLF---DHLASHGYIVVSPQLYNLMP---------------PK-GN- 57 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~-------------~~~l~---~~Las~Gy~Vv~~d~~~~~~---------------~~-~~- 57 (278)
.+-++||+.|++.++... |..+. +.|--.-|-||++|..|.+. ++ +.
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 456899999999986532 33332 12323349999999987642 10 00
Q ss_pred ----chhhHHHHHHHHhhhhhhhcCCccccCCCCceE-EEEeChhHHHHHHHHhhCCCCCCCCcccceEEec
Q 043492 58 ----KEVDAAAEEINWLPKGLQSHLPENVVADLNYSA-LMGHSRGGLTAFALAQGYATNPPLGLKFSALVGV 124 (278)
Q Consensus 58 ----~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~-l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~ 124 (278)
....++.+..+.+ ..+++. ++.+++. ++||||||++|+.++..+|+ +++.++.+
T Consensus 134 ~~~~fP~~t~~d~~~~~----~~ll~~---lgi~~~~~vvG~SmGG~ial~~a~~~P~------~v~~lv~i 192 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQ----KELIKS---LGIARLHAVMGPSMGGMQAQEWAVHYPH------MVERMIGV 192 (389)
T ss_pred cCCCCCcCcHHHHHHHH----HHHHHH---cCCCCceEEEEECHHHHHHHHHHHHChH------hhheEEEE
Confidence 0112333333332 222222 5677886 99999999999999999997 55555554
No 117
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.87 E-value=1.4e-08 Score=83.79 Aligned_cols=104 Identities=22% Similarity=0.257 Sum_probs=78.2
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEE
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMG 93 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~G 93 (278)
+.|+++|+.+|+...|..|++.|...++.|+++++++.. .......++.++++...+.+....+ ..++.|+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~------~gp~~L~G 72 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQP------EGPYVLAG 72 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTS------SSSEEEEE
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCC------CCCeeehc
Confidence 368999999999999999999999977899999998875 2333445666666666555554332 23999999
Q ss_pred eChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 94 HSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 94 hS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
||+||.+|..+|..-.+. +..+..++++|...
T Consensus 73 ~S~Gg~lA~E~A~~Le~~---G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEA---GEEVSRLILIDSPP 104 (229)
T ss_dssp ETHHHHHHHHHHHHHHHT---T-SESEEEEESCSS
T ss_pred cCccHHHHHHHHHHHHHh---hhccCceEEecCCC
Confidence 999999999999864321 23688899998443
No 118
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.86 E-value=1.2e-08 Score=93.98 Aligned_cols=100 Identities=23% Similarity=0.297 Sum_probs=70.9
Q ss_pred cEEEecCC---CCCceEEEEeCCCC---CCChhHHHHHHHHHHc--CcEEEEeccC-CC-CCC-------CCCchhhHHH
Q 043492 2 LFIVFPDN---QGKYEVILFFPGTS---VSNTSYSKLFDHLASH--GYIVVSPQLY-NL-MPP-------KGNKEVDAAA 64 (278)
Q Consensus 2 ~~i~~P~~---~~~~Pvvv~~hG~~---~~~~~~~~l~~~Las~--Gy~Vv~~d~~-~~-~~~-------~~~~~~~~~~ 64 (278)
+.||.|.. .++.|||||+||++ ++...+ ....|+.. |++|+.++++ |. +.. .......|..
T Consensus 81 l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~ 158 (493)
T cd00312 81 LNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQR 158 (493)
T ss_pred EEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHH
Confidence 46888864 46789999999987 333222 33455554 3999999987 43 111 1123467889
Q ss_pred HHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhC
Q 043492 65 EEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 65 ~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
.+++|+.+++... ..|.++|.|+|||.||..+..++...
T Consensus 159 ~al~wv~~~i~~f-----ggd~~~v~~~G~SaG~~~~~~~~~~~ 197 (493)
T cd00312 159 LALKWVQDNIAAF-----GGDPDSVTIFGESAGGASVSLLLLSP 197 (493)
T ss_pred HHHHHHHHHHHHh-----CCCcceEEEEeecHHHHHhhhHhhCc
Confidence 9999987766542 26899999999999999998887753
No 119
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.84 E-value=4.6e-08 Score=81.06 Aligned_cols=104 Identities=20% Similarity=0.255 Sum_probs=74.4
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch-hhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE-VDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
.+..+||=+||..|+-.++.++...|.+.|.+++.+++||++....... ...-.+-..+...-++. +. ++ +++
T Consensus 33 s~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~-l~----i~-~~~ 106 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDE-LG----IK-GKL 106 (297)
T ss_pred CCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHH-cC----CC-Cce
Confidence 3566899999999999999999999999999999999999875443221 11222222221110111 11 22 689
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
..+|||.|+-.|+.++...+ ..++++++|.+
T Consensus 107 i~~gHSrGcenal~la~~~~--------~~g~~lin~~G 137 (297)
T PF06342_consen 107 IFLGHSRGCENALQLAVTHP--------LHGLVLINPPG 137 (297)
T ss_pred EEEEeccchHHHHHHHhcCc--------cceEEEecCCc
Confidence 99999999999999998875 34677777765
No 120
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.83 E-value=7e-09 Score=90.01 Aligned_cols=112 Identities=16% Similarity=0.169 Sum_probs=63.6
Q ss_pred CCceEEEEeCCCCCCC---hhHHHHHHHHHHc---CcEEEEeccCCCCCCCCCc---hhhHHHHHHHHhhhhhhhcCCcc
Q 043492 11 GKYEVILFFPGTSVSN---TSYSKLFDHLASH---GYIVVSPQLYNLMPPKGNK---EVDAAAEEINWLPKGLQSHLPEN 81 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~---~~~~~l~~~Las~---Gy~Vv~~d~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~ 81 (278)
.+.|++|++|||.++. .....+.+.+-++ ++.|+++|+.......... ....+.+.+..+ +..+.. .
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~---l~~L~~-~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKF---LSFLIN-N 144 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHH---HHHHHH-H
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHH---HHHHHh-h
Confidence 4789999999999877 3556666655554 8999999984321111011 111122222222 222111 1
Q ss_pred ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC
Q 043492 82 VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 82 ~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
..++.++|.|+|||+||++|..++..... +.++..|.++||....
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~----~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKG----GGKIGRITGLDPAGPL 189 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT-------SSEEEEES-B-TT
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccC----cceeeEEEecCccccc
Confidence 24678999999999999999999987654 2378899999998754
No 121
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.82 E-value=2.8e-08 Score=80.29 Aligned_cols=166 Identities=19% Similarity=0.288 Sum_probs=90.9
Q ss_pred cCC--CCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCC-CCCCCC-------chhhHHHHHHHHhhhhhhh
Q 043492 7 PDN--QGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNL-MPPKGN-------KEVDAAAEEINWLPKGLQS 76 (278)
Q Consensus 7 P~~--~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~-~~~~~~-------~~~~~~~~~~~~l~~~l~~ 76 (278)
|++ ..+.+.||+.+|++.....|..++++|+..||.|+-+|+..+ |.+.+. ....++..+++|+.+
T Consensus 22 P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~---- 97 (294)
T PF02273_consen 22 PKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLAT---- 97 (294)
T ss_dssp --TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHH----
T ss_pred CCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHh----
Confidence 543 346799999999999999999999999999999999998654 333322 123456778888653
Q ss_pred cCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC----------CC---CCCCCCCCccc
Q 043492 77 HLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI----------PY---FHSELDPPILD 143 (278)
Q Consensus 77 ~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~----------~~---~~~~~~~~~~~ 143 (278)
-...+++|+--|+-|-+|...+.+. +++.++....+... ++ ...++ |..+.
T Consensus 98 -------~g~~~~GLIAaSLSaRIAy~Va~~i--------~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~l-p~dld 161 (294)
T PF02273_consen 98 -------RGIRRIGLIAASLSARIAYEVAADI--------NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQL-PEDLD 161 (294)
T ss_dssp -------TT---EEEEEETTHHHHHHHHTTTS----------SEEEEES--S-HHHHHHHHHSS-GGGS-GGG---SEEE
T ss_pred -------cCCCcchhhhhhhhHHHHHHHhhcc--------CcceEEEEeeeeeHHHHHHHHhccchhhcchhhC-CCccc
Confidence 2556899999999999999999743 35556655444321 00 00111 11111
Q ss_pred c---------------------------CccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecC
Q 043492 144 Y---------------------------ESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATY 196 (278)
Q Consensus 144 ~---------------------------~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g 196 (278)
+ +...+++|++.++++. |.++.. .+..+....+..+...++.++|
T Consensus 162 feGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~-------D~WV~q-~eV~~~~~~~~s~~~klysl~G 233 (294)
T PF02273_consen 162 FEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTAND-------DDWVKQ-SEVEELLDNINSNKCKLYSLPG 233 (294)
T ss_dssp ETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT--------TTS-H-HHHHHHHTT-TT--EEEEEETT
T ss_pred ccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCC-------CccccH-HHHHHHHHhcCCCceeEEEecC
Confidence 1 1157899999999999 555543 3455566667777768999999
Q ss_pred CCcc
Q 043492 197 YGHM 200 (278)
Q Consensus 197 ~~H~ 200 (278)
+.|-
T Consensus 234 s~Hd 237 (294)
T PF02273_consen 234 SSHD 237 (294)
T ss_dssp -SS-
T ss_pred ccch
Confidence 9995
No 122
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.79 E-value=5e-08 Score=90.56 Aligned_cols=118 Identities=20% Similarity=0.202 Sum_probs=78.0
Q ss_pred cEEEecCCCC---CceEEEEeCCCC---CCC-hhHHHHHHHHHHcCcEEEEeccCC----CC---CCC---CCchhhHHH
Q 043492 2 LFIVFPDNQG---KYEVILFFPGTS---VSN-TSYSKLFDHLASHGYIVVSPQLYN----LM---PPK---GNKEVDAAA 64 (278)
Q Consensus 2 ~~i~~P~~~~---~~Pvvv~~hG~~---~~~-~~~~~l~~~Las~Gy~Vv~~d~~~----~~---~~~---~~~~~~~~~ 64 (278)
+.||.|.... +.||+||+||++ |+. .....-...+++++.+||.+++|= .- ... ......|..
T Consensus 111 LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~ 190 (535)
T PF00135_consen 111 LNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQR 190 (535)
T ss_dssp EEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHH
T ss_pred HhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhH
Confidence 4589997543 689999999988 333 123344566788999999999862 11 111 234567889
Q ss_pred HHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 65 EEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 65 ~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
.++.|+.++|..+ .-|+++|.|+|||.||..+...+...... --++.+|+.++..
T Consensus 191 ~AL~WV~~nI~~F-----GGDp~~VTl~G~SAGa~sv~~~l~sp~~~----~LF~raI~~SGs~ 245 (535)
T PF00135_consen 191 LALKWVQDNIAAF-----GGDPDNVTLFGQSAGAASVSLLLLSPSSK----GLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHGGGG-----TEEEEEEEEEEETHHHHHHHHHHHGGGGT----TSBSEEEEES--T
T ss_pred HHHHHHHhhhhhc-----ccCCcceeeeeecccccccceeeeccccc----ccccccccccccc
Confidence 9999988877653 24889999999999999999887763211 1577888877643
No 123
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.78 E-value=1.8e-08 Score=82.41 Aligned_cols=165 Identities=17% Similarity=0.162 Sum_probs=78.5
Q ss_pred CceEEEEeCCCCCCChhHHHH----HHHHHHcCcEEEEeccCCCC-C-CCC--------------------------Cch
Q 043492 12 KYEVILFFPGTSVSNTSYSKL----FDHLASHGYIVVSPQLYNLM-P-PKG--------------------------NKE 59 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l----~~~Las~Gy~Vv~~d~~~~~-~-~~~--------------------------~~~ 59 (278)
+++-|+++||++.+...++.. .+.|.+.++..+.+|-+-.. . ++. ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 467899999999999876554 45555547888888753221 0 000 011
Q ss_pred hhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCC--CCcccceEEecCcCCCCCCCCCCC
Q 043492 60 VDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPP--LGLKFSALVGVDPVAGIPYFHSEL 137 (278)
Q Consensus 60 ~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~--~~~~~~a~v~~~p~~~~~~~~~~~ 137 (278)
...+.+.++++.+.+.+ .+. -.+|+|+|+||.+|..++....+... ....+|.+|.++++.........
T Consensus 83 ~~~~~~sl~~l~~~i~~----~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~- 153 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEE----NGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQE- 153 (212)
T ss_dssp G---HHHHHHHHHHHHH----H-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTT-
T ss_pred ccCHHHHHHHHHHHHHh----cCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhh-
Confidence 33455555555443333 121 35999999999999988864221100 12357888888866643211011
Q ss_pred CCCccccCccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 138 DPPILDYESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 138 ~~~~~~~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
.+ ....+++|+|.|.|++ |...+.. ....+.+.+.+. ..++.-.+||.
T Consensus 154 ---~~--~~~~i~iPtlHv~G~~-------D~~~~~~-~s~~L~~~~~~~--~~v~~h~gGH~ 201 (212)
T PF03959_consen 154 ---LY--DEPKISIPTLHVIGEN-------DPVVPPE-RSEALAEMFDPD--ARVIEHDGGHH 201 (212)
T ss_dssp ---TT----TT---EEEEEEETT--------SSS-HH-HHHHHHHHHHHH--EEEEEESSSSS
T ss_pred ---hh--ccccCCCCeEEEEeCC-------CCCcchH-HHHHHHHhccCC--cEEEEECCCCc
Confidence 11 2346899999999999 7777742 234445554442 24556677786
No 124
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.73 E-value=2e-07 Score=76.79 Aligned_cols=105 Identities=17% Similarity=0.195 Sum_probs=64.3
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHH--------cCcEEEEeccCCCCCCCCCchh----hHHHHHHHHhhhhhhhcCCc
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLAS--------HGYIVVSPQLYNLMPPKGNKEV----DAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las--------~Gy~Vv~~d~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~ 80 (278)
...|||+||.+|+...+..++..+.+ ..+.++++|+......-..... ..+.+.+..+.+ ...
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~----~~~- 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILE----LYK- 78 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHH----hhh-
Confidence 45899999999998888888877632 2477888887543211111111 222333333222 111
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
...-..++|.++||||||.+|-.+........ ..++.++.+.
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~---~~v~~iitl~ 120 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDP---DSVKTIITLG 120 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhcccccc---ccEEEEEEEc
Confidence 12346789999999999998888876543211 2577888755
No 125
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.71 E-value=3.9e-07 Score=83.23 Aligned_cols=101 Identities=14% Similarity=0.067 Sum_probs=61.8
Q ss_pred EEEecCCC-CCceEEEEeCCCCCCChhH-----HHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhh
Q 043492 3 FIVFPDNQ-GKYEVILFFPGTSVSNTSY-----SKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQS 76 (278)
Q Consensus 3 ~i~~P~~~-~~~Pvvv~~hG~~~~~~~~-----~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (278)
+-|.|.++ .....|++++.+-.....+ .+++++|.++||.|+.+|+..-+..... .++.+.++.+.+.++.
T Consensus 204 iqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~---~~ldDYv~~i~~Ald~ 280 (560)
T TIGR01839 204 IQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE---WGLSTYVDALKEAVDA 280 (560)
T ss_pred EEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC---CCHHHHHHHHHHHHHH
Confidence 45777643 3345667777766333222 6899999999999999998664333222 2222222333222322
Q ss_pred cCCccccCCCCceEEEEeChhHHHHHH----HHhhCC
Q 043492 77 HLPENVVADLNYSALMGHSRGGLTAFA----LAQGYA 109 (278)
Q Consensus 77 ~~~~~~~~d~~~i~l~GhS~GG~~a~~----~a~~~~ 109 (278)
+.. .-+.++|.++|||+||.+++. ++...+
T Consensus 281 V~~---~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~ 314 (560)
T TIGR01839 281 VRA---ITGSRDLNLLGACAGGLTCAALVGHLQALGQ 314 (560)
T ss_pred HHH---hcCCCCeeEEEECcchHHHHHHHHHHHhcCC
Confidence 221 134678999999999999986 455544
No 126
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.70 E-value=3.8e-07 Score=72.26 Aligned_cols=165 Identities=15% Similarity=0.176 Sum_probs=100.5
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCC--CC----------------CCCchhhHHHHHHHHhhhhhh
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLM--PP----------------KGNKEVDAAAEEINWLPKGLQ 75 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~--~~----------------~~~~~~~~~~~~~~~l~~~l~ 75 (278)
-+|||+||.+.+...+..+++.|.-....-++|.-+... .. +...+...+....+. +.
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~----i~ 79 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN----IA 79 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHH----HH
Confidence 489999999999999988888877776777776543221 00 001111122222222 22
Q ss_pred hcCCc--cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCe
Q 043492 76 SHLPE--NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPV 153 (278)
Q Consensus 76 ~~~~~--~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~ 153 (278)
.+++. ...++.+||++.|+|+||..|+..+..++. .+..+...+++...... .+ +.... . .+ .+|+
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~------~l~G~~~~s~~~p~~~~--~~-~~~~~-~-~~-~~~i 147 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK------ALGGIFALSGFLPRASI--GL-PGWLP-G-VN-YTPI 147 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhcccc------ccceeeccccccccchh--hc-cCCcc-c-cC-cchh
Confidence 22211 234678899999999999999999998865 56666666655531110 01 11110 0 12 7899
Q ss_pred EEEecCCCCCcCCCCCCCCcccc--HHHHHHHhcCCcceeEEecCCCcccc
Q 043492 154 TVIGTGLGGLAKCVVPCAPEKEN--HQQFFNRCTSSDRAHFDATYYGHMDV 202 (278)
Q Consensus 154 Lii~g~~~~~~~~~d~~~p~~~~--~~~~~~~~~~~~~~~~~~~g~~H~~f 202 (278)
+..||+. |..+|..-. ..+++..+... ..+..++|.+|..+
T Consensus 148 ~~~Hg~~-------d~~vp~~~g~~s~~~l~~~~~~-~~f~~y~g~~h~~~ 190 (206)
T KOG2112|consen 148 LLCHGTA-------DPLVPFRFGEKSAQFLKSLGVR-VTFKPYPGLGHSTS 190 (206)
T ss_pred heecccC-------CceeehHHHHHHHHHHHHcCCc-eeeeecCCcccccc
Confidence 9999999 777776322 22233444444 38889999999844
No 127
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.68 E-value=3.8e-07 Score=74.95 Aligned_cols=100 Identities=24% Similarity=0.303 Sum_probs=66.3
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcC--cEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceE
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHG--YIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSA 90 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~G--y~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~ 90 (278)
.|.|+++||+.++...|......+.... |.|+.+|.+|++.+. .. ........+. +..+++ .+...++.
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~----~~~~~~---~~~~~~~~ 91 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADD----LAALLD---ALGLEKVV 91 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHH----HHHHHH---HhCCCceE
Confidence 5599999999999888877433444421 999999999887664 00 0001111111 111111 13445599
Q ss_pred EEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 91 LMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 91 l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
++|||+||.+++.++...+. +++.++.+++.
T Consensus 92 l~G~S~Gg~~~~~~~~~~p~------~~~~~v~~~~~ 122 (282)
T COG0596 92 LVGHSMGGAVALALALRHPD------RVRGLVLIGPA 122 (282)
T ss_pred EEEecccHHHHHHHHHhcch------hhheeeEecCC
Confidence 99999999999999999886 56667766644
No 128
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.67 E-value=3.4e-07 Score=72.01 Aligned_cols=159 Identities=15% Similarity=0.081 Sum_probs=96.1
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCC--CchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEE
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKG--NKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALM 92 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~ 92 (278)
++||+.|=+|-+..-..+++.|+++|+.|+.+|....-.... .....++.++++...+ +-..+++.|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~----------~w~~~~vvLi 73 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRA----------RWGRKRVVLI 73 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHH----------HhCCceEEEE
Confidence 678888888877788899999999999999999743222211 1123344445444322 1356799999
Q ss_pred EeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC--CCC---CCCc--ccc--CccCCC-CCeEEEecCCCC
Q 043492 93 GHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH--SEL---DPPI--LDY--ESFNFS-IPVTVIGTGLGG 162 (278)
Q Consensus 93 GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~--~~~---~~~~--~~~--~~~~~~-~P~Lii~g~~~~ 162 (278)
|+|+|+-+.-....+.|.. .+-+++.++++.|.....+.. ..+ .... +.. ...+++ .|+++|.|+.+.
T Consensus 74 GYSFGADvlP~~~nrLp~~--~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~ 151 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAA--LRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDED 151 (192)
T ss_pred eecCCchhHHHHHhhCCHH--HHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCC
Confidence 9999998777666555431 112677888888766544331 000 0000 000 112343 599999999843
Q ss_pred CcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 163 LAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 163 ~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
|...|. +..+....+.++|+-||
T Consensus 152 -----d~~cp~----------l~~~~~~~i~lpGgHHf 174 (192)
T PF06057_consen 152 -----DSLCPS----------LRQPGVEVIALPGGHHF 174 (192)
T ss_pred -----CCcCcc----------ccCCCcEEEEcCCCcCC
Confidence 333332 22233267888888777
No 129
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.66 E-value=3.2e-07 Score=77.59 Aligned_cols=114 Identities=15% Similarity=0.207 Sum_probs=80.9
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHc---CcEEEEeccCCCCCCCCC------chhhHHHHHHHHhhhhhhhcCCcccc
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASH---GYIVVSPQLYNLMPPKGN------KEVDAAAEEINWLPKGLQSHLPENVV 83 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~---Gy~Vv~~d~~~~~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~ 83 (278)
.++|+|++|..|-.+.|..+++.|.+. .|.|.++.|.|+...... ....++.+-++.-.+-++..+....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~- 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN- 80 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc-
Confidence 468999999999999999999999865 899999999998644322 2233344433332222333332211
Q ss_pred CCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC
Q 043492 84 ADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
-...++.++|||.|+++++..+.+.+ ....+++.++.+-|....
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~---~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLP---DLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhcc---ccCCceeEEEEeCCcccc
Confidence 13568999999999999999999887 112378889888887643
No 130
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.61 E-value=9.3e-08 Score=75.08 Aligned_cols=85 Identities=20% Similarity=0.232 Sum_probs=59.3
Q ss_pred EEEEeCCCCCCC-hhHHHHHHHHHHc-CcEEEEeccCCCCCCCCCch-------hhHHHHHHHHhhhhhhhcCCccccCC
Q 043492 15 VILFFPGTSVSN-TSYSKLFDHLASH-GYIVVSPQLYNLMPPKGNKE-------VDAAAEEINWLPKGLQSHLPENVVAD 85 (278)
Q Consensus 15 vvv~~hG~~~~~-~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~~d 85 (278)
.|++++|.-|+. ..|......|-.- -+++++.|.+|-|.+....+ ..|.+.+++.+ ..++
T Consensus 44 ~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM-----------~aLk 112 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLM-----------EALK 112 (277)
T ss_pred eeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHH-----------HHhC
Confidence 677888877654 4666666655554 38999999988765442221 22333444432 2267
Q ss_pred CCceEEEEeChhHHHHHHHHhhCCC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
..++.|+|.|=||.+|+.+|+++++
T Consensus 113 ~~~fsvlGWSdGgiTalivAak~~e 137 (277)
T KOG2984|consen 113 LEPFSVLGWSDGGITALIVAAKGKE 137 (277)
T ss_pred CCCeeEeeecCCCeEEEEeeccChh
Confidence 8899999999999999999999886
No 131
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.59 E-value=2.1e-06 Score=66.27 Aligned_cols=150 Identities=17% Similarity=0.162 Sum_probs=87.0
Q ss_pred eEEEEeCCCCCCChh-H-HHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 14 EVILFFPGTSVSNTS-Y-SKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~-~-~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
+.+|++||+++|... | +.+-+.+-. +--++...-.. ....+.++.+.+.++. -.+.++|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~~w~~-------P~~~dWi~~l~~~v~a--------~~~~~vl 63 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQDDWEA-------PVLDDWIARLEKEVNA--------AEGPVVL 63 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccCCCCC-------CCHHHHHHHHHHHHhc--------cCCCeEE
Confidence 468999999988742 2 222222221 22233222111 1233333333333332 1345999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCcccc---CccCCCCCeEEEecCCCCCcCCCC
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDY---ESFNFSIPVTVIGTGLGGLAKCVV 168 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~P~Lii~g~~~~~~~~~d 168 (278)
++||+|+.+++.++..... .++++++++|..-..- ........++ ....+.-|.+++++.+ |
T Consensus 64 VAHSLGc~~v~h~~~~~~~------~V~GalLVAppd~~~~--~~~~~~~~tf~~~p~~~lpfps~vvaSrn-------D 128 (181)
T COG3545 64 VAHSLGCATVAHWAEHIQR------QVAGALLVAPPDVSRP--EIRPKHLMTFDPIPREPLPFPSVVVASRN-------D 128 (181)
T ss_pred EEecccHHHHHHHHHhhhh------ccceEEEecCCCcccc--ccchhhccccCCCccccCCCceeEEEecC-------C
Confidence 9999999999999987654 7889999888764311 1111222222 1134667999999998 7
Q ss_pred CCCCccccHHHHHHHhcCCcceeEEecCCCccc
Q 043492 169 PCAPEKENHQQFFNRCTSSDRAHFDATYYGHMD 201 (278)
Q Consensus 169 ~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~ 201 (278)
+..+.. +.+.+.+.-.. .++.+..+||++
T Consensus 129 p~~~~~--~a~~~a~~wgs--~lv~~g~~GHiN 157 (181)
T COG3545 129 PYVSYE--HAEDLANAWGS--ALVDVGEGGHIN 157 (181)
T ss_pred CCCCHH--HHHHHHHhccH--hheecccccccc
Confidence 776652 44444433222 578889999973
No 132
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.55 E-value=2.1e-07 Score=82.28 Aligned_cols=109 Identities=22% Similarity=0.267 Sum_probs=76.4
Q ss_pred cCCCCCceEEEEeCCCCCCChhH------HHHHHHHHHcCcEEEEeccCCCCCCCC--------C----------chhhH
Q 043492 7 PDNQGKYEVILFFPGTSVSNTSY------SKLFDHLASHGYIVVSPQLYNLMPPKG--------N----------KEVDA 62 (278)
Q Consensus 7 P~~~~~~Pvvv~~hG~~~~~~~~------~~l~~~Las~Gy~Vv~~d~~~~~~~~~--------~----------~~~~~ 62 (278)
|..++++|+|++.||+-+++..| ..++=.||.+||.|..-+.||...+.. . ....|
T Consensus 67 p~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yD 146 (403)
T KOG2624|consen 67 PRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYD 146 (403)
T ss_pred cCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcC
Confidence 33447899999999999887755 567788999999999999998653321 1 11234
Q ss_pred HHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 63 AAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
+.++++.+ +.. -..+++..+|||+|+.+....+..+++.. -+|+..++++|+.
T Consensus 147 LPA~IdyI-------L~~---T~~~kl~yvGHSQGtt~~fv~lS~~p~~~---~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 147 LPAMIDYI-------LEK---TGQEKLHYVGHSQGTTTFFVMLSERPEYN---KKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHH-------HHh---ccccceEEEEEEccchhheehhcccchhh---hhhheeeeecchh
Confidence 44555553 211 24579999999999999998888776422 1466666666655
No 133
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.42 E-value=1.2e-06 Score=70.36 Aligned_cols=83 Identities=18% Similarity=0.127 Sum_probs=57.8
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCch-----------hhHHHHHHHHhhhhhhhcCCcccc
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE-----------VDAAAEEINWLPKGLQSHLPENVV 83 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~-----------~~~~~~~~~~l~~~l~~~~~~~~~ 83 (278)
.|+.-.+.+.-...|..++..++..||.|+..|++|.+.+..... ..|+..+++++.+.
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~---------- 101 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKA---------- 101 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhh----------
Confidence 566666667777899999999999999999999999875442111 12344445553221
Q ss_pred CCCCceEEEEeChhHHHHHHHHhh
Q 043492 84 ADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
...-....+|||+||.+...+...
T Consensus 102 ~~~~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 102 LPGHPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred CCCCceEEeeccccceeecccccC
Confidence 223478999999999977666544
No 134
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.40 E-value=6.3e-06 Score=70.57 Aligned_cols=76 Identities=22% Similarity=0.239 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhh
Q 043492 30 SKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 30 ~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
..+...+.++||+|+++|+.|.+.+-. ........++|-+.. .+.+....+.-...+++++|||.||..++.++..
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~y~-~~~~~a~avLD~vRA-A~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTPYL-NGRSEAYAVLDAVRA-ARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCccc-CcHhHHHHHHHHHHH-HHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 445677889999999999998876332 223445556665422 2222211111124699999999999999887753
No 135
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.39 E-value=3.3e-07 Score=74.65 Aligned_cols=89 Identities=19% Similarity=0.196 Sum_probs=49.0
Q ss_pred EEEEeCCCCC-CChhHHHHHHHHHHcCcE---EEEeccCCCCCCCCCchhh-HHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 15 VILFFPGTSV-SNTSYSKLFDHLASHGYI---VVSPQLYNLMPPKGNKEVD-AAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 15 vvv~~hG~~~-~~~~~~~l~~~Las~Gy~---Vv~~d~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
.|||+||.++ ....|..+++.|.++||- |.++++-............ ..+. ...|..-+.+++.. -.. +|
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~-~~~l~~fI~~Vl~~---TGa-kV 77 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCES-AKQLRAFIDAVLAY---TGA-KV 77 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHH-HHHHHHHHHHHHHH---HT---E
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhh-HHHHHHHHHHHHHh---hCC-EE
Confidence 5899999998 667999999999999999 7999963322111001111 1111 12222223333322 234 99
Q ss_pred EEEEeChhHHHHHHHHhhC
Q 043492 90 ALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~ 108 (278)
-|+||||||.++-.+....
T Consensus 78 DIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEETCHHHHHHHHHHHC
T ss_pred EEEEcCCcCHHHHHHHHHc
Confidence 9999999999998887644
No 136
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.39 E-value=1.1e-06 Score=79.98 Aligned_cols=100 Identities=23% Similarity=0.260 Sum_probs=75.1
Q ss_pred cEEEecCCCCCceEEEEeC--CCCCC---ChhHHHHHH---HHHHcCcEEEEeccCCCCCCCCC------chhhHHHHHH
Q 043492 2 LFIVFPDNQGKYEVILFFP--GTSVS---NTSYSKLFD---HLASHGYIVVSPQLYNLMPPKGN------KEVDAAAEEI 67 (278)
Q Consensus 2 ~~i~~P~~~~~~Pvvv~~h--G~~~~---~~~~~~l~~---~Las~Gy~Vv~~d~~~~~~~~~~------~~~~~~~~~~ 67 (278)
..||.|...++.|+++..+ =+.-. .......+. .++.+||+||..|.+|.+.+.+. .+..|..++|
T Consensus 34 ~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I 113 (563)
T COG2936 34 ADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTI 113 (563)
T ss_pred EEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccccccchhHHH
Confidence 4689999999999999999 22211 112233344 69999999999999998776532 3667888999
Q ss_pred HHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 68 NWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 68 ~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
+|+.++ + ---.+|+.+|-|++|.+.+.+|...+-
T Consensus 114 ~Wia~Q-----p----WsNG~Vgm~G~SY~g~tq~~~Aa~~pP 147 (563)
T COG2936 114 EWLAKQ-----P----WSNGNVGMLGLSYLGFTQLAAAALQPP 147 (563)
T ss_pred HHHHhC-----C----ccCCeeeeecccHHHHHHHHHHhcCCc
Confidence 997652 1 123599999999999999999988764
No 137
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.35 E-value=3.3e-05 Score=66.75 Aligned_cols=148 Identities=19% Similarity=0.169 Sum_probs=90.7
Q ss_pred EEEecCC-CCCceEEEEeCCCCCCC---hhHHHHHHHHHHcCcEEEEeccCCCCC---CC-----------C----Cch-
Q 043492 3 FIVFPDN-QGKYEVILFFPGTSVSN---TSYSKLFDHLASHGYIVVSPQLYNLMP---PK-----------G----NKE- 59 (278)
Q Consensus 3 ~i~~P~~-~~~~Pvvv~~hG~~~~~---~~~~~l~~~Las~Gy~Vv~~d~~~~~~---~~-----------~----~~~- 59 (278)
.+|.|.. .....+||++||.+.+. .....|-+.|.++||.++++..+.-.. +. . ...
T Consensus 76 aL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~ 155 (310)
T PF12048_consen 76 ALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPS 155 (310)
T ss_pred EEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCC
Confidence 4677764 45678999999999776 467888899999999999988766210 00 0 000
Q ss_pred ----------hhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 60 ----------VDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 60 ----------~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
..........+...+...+.........+++|+||+.|+..++.+....+.. .+.++|.++|...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~-----~~daLV~I~a~~p 230 (310)
T PF12048_consen 156 DEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPP-----MPDALVLINAYWP 230 (310)
T ss_pred CCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCc-----ccCeEEEEeCCCC
Confidence 0001111111112222222221222345699999999999999999887642 5789999998765
Q ss_pred CCCCCCCCCCCccccCccCCCCCeEEEecCC
Q 043492 130 IPYFHSELDPPILDYESFNFSIPVTVIGTGL 160 (278)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~P~Lii~g~~ 160 (278)
.......+.. ...++++|+|=|....
T Consensus 231 ~~~~n~~l~~-----~la~l~iPvLDi~~~~ 256 (310)
T PF12048_consen 231 QPDRNPALAE-----QLAQLKIPVLDIYSAD 256 (310)
T ss_pred cchhhhhHHH-----HhhccCCCEEEEecCC
Confidence 4222111111 1146899999886654
No 138
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.31 E-value=1.9e-05 Score=70.17 Aligned_cols=97 Identities=8% Similarity=-0.066 Sum_probs=57.5
Q ss_pred EEEecCCCC---CceEEEEeCCCCCCCh-hHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcC
Q 043492 3 FIVFPDNQG---KYEVILFFPGTSVSNT-SYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHL 78 (278)
Q Consensus 3 ~i~~P~~~~---~~Pvvv~~hG~~~~~~-~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 78 (278)
+-|.|...+ +.|.|+++.-+.+... ...++.+.|.. |+.|..+|+..-+.......-.++.+.++.+.+.++.
T Consensus 89 ~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~-- 165 (406)
T TIGR01849 89 IHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRF-- 165 (406)
T ss_pred EEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHH--
Confidence 345565332 1245566665554332 45788899999 9999999985443211111222344444554443422
Q ss_pred CccccCCCCceEEEEeChhHHHHHHHHhhC
Q 043492 79 PENVVADLNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 79 ~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
+..+ +.++|.|+||..++.++...
T Consensus 166 -----~G~~-v~l~GvCqgG~~~laa~Al~ 189 (406)
T TIGR01849 166 -----LGPD-IHVIAVCQPAVPVLAAVALM 189 (406)
T ss_pred -----hCCC-CcEEEEchhhHHHHHHHHHH
Confidence 2344 89999999999977665543
No 139
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.31 E-value=5.1e-06 Score=68.69 Aligned_cols=120 Identities=23% Similarity=0.324 Sum_probs=80.1
Q ss_pred EEEecCC---CCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCC-------------CCCCC----------
Q 043492 3 FIVFPDN---QGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNL-------------MPPKG---------- 56 (278)
Q Consensus 3 ~i~~P~~---~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~-------------~~~~~---------- 56 (278)
.++.|++ .+++|||.|.-|-.........+.+.++..=..|++..-+.. .+...
T Consensus 26 ~i~~P~~~~~~~~YpVlY~lDGn~vf~~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~~~r~~DyTp~~~~~~~~~~~~~ 105 (264)
T COG2819 26 FIATPKNYPKPGGYPVLYMLDGNAVFNALTEIMLRILADLPPPVIVGIGYETILVFDPNRRAYDYTPPSANAIVASSRDG 105 (264)
T ss_pred EecCCCCCCCCCCCcEEEEecchhhhchHHHHhhhhhhcCCCceEEEeccccccccccccccccCCCCCCCcccccccCC
Confidence 4555652 234899999999877766666666777766433333221110 00000
Q ss_pred -CchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 57 -NKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 57 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
...--......+.|.+++...+++..++|.++.+++|||+||.+++.+...+|+ .+....+++|..
T Consensus 106 ~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~------~F~~y~~~SPSl 172 (264)
T COG2819 106 FYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD------CFGRYGLISPSL 172 (264)
T ss_pred CCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcc------hhceeeeecchh
Confidence 000112345566666778888888888999999999999999999999999987 688888888755
No 140
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.28 E-value=3.6e-05 Score=61.67 Aligned_cols=163 Identities=20% Similarity=0.109 Sum_probs=96.1
Q ss_pred CceEEEEeCCCCCCChhHHH----HHHHHHHcCcEEEEeccCCCC----CCCCC-----ch-------------------
Q 043492 12 KYEVILFFPGTSVSNTSYSK----LFDHLASHGYIVVSPQLYNLM----PPKGN-----KE------------------- 59 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~----l~~~Las~Gy~Vv~~d~~~~~----~~~~~-----~~------------------- 59 (278)
+.+-|+++||+..+.+.++. +-+.|.+. +-.+.+|-+-.- .+... ..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 45789999999988875543 44445555 566666644210 00000 00
Q ss_pred --hhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhC--CCCCCCCcccceEEecCcCCCCCCCCC
Q 043492 60 --VDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGY--ATNPPLGLKFSALVGVDPVAGIPYFHS 135 (278)
Q Consensus 60 --~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~--~~~~~~~~~~~a~v~~~p~~~~~~~~~ 135 (278)
.....+.++.+.+.+.+ .+-.| ||+|+|.|+.++..++... ...-.....++.+|.++.+......
T Consensus 83 ~~~~~~eesl~yl~~~i~e----nGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-- 152 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKE----NGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-- 152 (230)
T ss_pred ccccChHHHHHHHHHHHHH----hCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--
Confidence 01122334443333332 34456 8999999999999998821 1111223467888888765543111
Q ss_pred CCCCCccccCccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 136 ELDPPILDYESFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 136 ~~~~~~~~~~~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
+.... ....+++|.|-|.|+. |..+|.. ....+++.+..+ .++...+||+
T Consensus 153 -~~~~~---~~~~i~~PSLHi~G~~-------D~iv~~~-~s~~L~~~~~~a---~vl~HpggH~ 202 (230)
T KOG2551|consen 153 -LDESA---YKRPLSTPSLHIFGET-------DTIVPSE-RSEQLAESFKDA---TVLEHPGGHI 202 (230)
T ss_pred -hhhhh---hccCCCCCeeEEeccc-------ceeecch-HHHHHHHhcCCC---eEEecCCCcc
Confidence 10111 1246899999999999 7777763 345677777765 5777888898
No 141
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.27 E-value=9.3e-05 Score=60.48 Aligned_cols=106 Identities=16% Similarity=0.266 Sum_probs=65.6
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHcC-----cEEEEeccCCCCC-----------CC----CCchhhHHHHHHHHhhhhhh
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASHG-----YIVVSPQLYNLMP-----------PK----GNKEVDAAAEEINWLPKGLQ 75 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~G-----y~Vv~~d~~~~~~-----------~~----~~~~~~~~~~~~~~l~~~l~ 75 (278)
.||+||.+|+..+...++++|.+.+ -.|+.+|-.|.-. |- .+.........-.|+...+.
T Consensus 48 TIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ms 127 (288)
T COG4814 48 TIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAMS 127 (288)
T ss_pred eEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHHH
Confidence 5899999999999999999999985 3456666555310 00 01111122223445443333
Q ss_pred hcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 76 SHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 76 ~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
.+ ..+.+..++-++||||||.....++..+..... -..++.++.+.
T Consensus 128 yL---~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks-~P~lnK~V~l~ 173 (288)
T COG4814 128 YL---QKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKS-LPPLNKLVSLA 173 (288)
T ss_pred HH---HHhcCCceeeeeeeccccHHHHHHHHHhcCCCC-CcchhheEEec
Confidence 32 223678899999999999999999987653210 01345555544
No 142
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.27 E-value=4.9e-06 Score=74.88 Aligned_cols=94 Identities=14% Similarity=0.169 Sum_probs=59.4
Q ss_pred CChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHH
Q 043492 25 SNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFAL 104 (278)
Q Consensus 25 ~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~ 104 (278)
....|..+.+.|++.||++ ..|++|.+....... ...+..+.+.+.+...... ...+++.|+||||||.++..+
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~--~~~~~~~~Lk~lIe~~~~~---~g~~kV~LVGHSMGGlva~~f 179 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN--RLPETMDGLKKKLETVYKA---SGGKKVNIISHSMGGLLVKCF 179 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccc--cHHHHHHHHHHHHHHHHHH---cCCCCEEEEEECHhHHHHHHH
Confidence 4467899999999999977 788888765443221 1122223332223322221 345699999999999999999
Q ss_pred HhhCCCCCCCCcccceEEecCc
Q 043492 105 AQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 105 a~~~~~~~~~~~~~~a~v~~~p 126 (278)
+...++.. .-.++.+|++++
T Consensus 180 l~~~p~~~--~k~I~~~I~la~ 199 (440)
T PLN02733 180 MSLHSDVF--EKYVNSWIAIAA 199 (440)
T ss_pred HHHCCHhH--HhHhccEEEECC
Confidence 88765421 114667776553
No 143
>COG0627 Predicted esterase [General function prediction only]
Probab=98.25 E-value=2e-06 Score=74.04 Aligned_cols=116 Identities=18% Similarity=0.222 Sum_probs=72.6
Q ss_pred CCCceEEEEeCCCCCCChhH---HHHHHHHHHcCcEEEEeccCCC--CC---------------CCCCch--hhHHHHHH
Q 043492 10 QGKYEVILFFPGTSVSNTSY---SKLFDHLASHGYIVVSPQLYNL--MP---------------PKGNKE--VDAAAEEI 67 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~---~~l~~~Las~Gy~Vv~~d~~~~--~~---------------~~~~~~--~~~~~~~~ 67 (278)
..+.||+++.||..++...+ ..+-+....+|++++++|-... +. .+.... .....+.-
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 36899999999999886433 4455667778999999865311 10 110000 00012222
Q ss_pred HHhhhhhhhcCCccccCCC--CceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCC
Q 043492 68 NWLPKGLQSHLPENVVADL--NYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIP 131 (278)
Q Consensus 68 ~~l~~~l~~~~~~~~~~d~--~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~ 131 (278)
+.|.+++...+......+. ++.+++||||||+.|+.+|..+++ +++.+..++|.....
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd------~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD------RFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc------hhceecccccccccc
Confidence 2232233322222333344 489999999999999999999986 788888888776553
No 144
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.19 E-value=9.1e-06 Score=66.65 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=51.6
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHc--CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASH--GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~--Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
+.=+|||+||+.|+...+..+.+.|... .+.-..+...+... +......++....+.+.+.+...+.... ....+|
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~-n~~~T~~gI~~~g~rL~~eI~~~~~~~~-~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSN-NEFKTFDGIDVCGERLAEEILEHIKDYE-SKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccc-cccccchhhHHHHHHHHHHHHHhccccc-cccccc
Confidence 3448999999999999999998888773 12111111111110 0111112233333333222333222111 124689
Q ss_pred EEEEeChhHHHHHHHHhh
Q 043492 90 ALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~ 107 (278)
.++||||||.++-.+...
T Consensus 81 sfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALGL 98 (217)
T ss_pred eEEEecccHHHHHHHHHH
Confidence 999999999988766653
No 145
>PRK04940 hypothetical protein; Provisional
Probab=98.19 E-value=4.2e-05 Score=60.06 Aligned_cols=90 Identities=14% Similarity=0.130 Sum_probs=50.1
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHc---CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEE
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASH---GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALM 92 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~---Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~ 92 (278)
|+|+||+.+++.+...-++.+. + ++.++ ++ + ...+. +++..+.+.+...... . ..++++|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~-~~~p~~~~~--~l-----~--~~~P~---~a~~~l~~~i~~~~~~-~--~~~~~~li 65 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ-FIDPDVRLI--SY-----S--TLHPK---HDMQHLLKEVDKMLQL-S--DDERPLIC 65 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe-eeCCCCeEE--EC-----C--CCCHH---HHHHHHHHHHHHhhhc-c--CCCCcEEE
Confidence 7999999999887444555555 2 12222 11 1 01111 1122222212211110 0 02469999
Q ss_pred EeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC
Q 043492 93 GHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 93 GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
|+|+||.-|..++.++. +++ |+++|...+
T Consensus 66 GSSLGGyyA~~La~~~g--------~~a-VLiNPAv~P 94 (180)
T PRK04940 66 GVGLGGYWAERIGFLCG--------IRQ-VIFNPNLFP 94 (180)
T ss_pred EeChHHHHHHHHHHHHC--------CCE-EEECCCCCh
Confidence 99999999999999875 444 456776644
No 146
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.15 E-value=2.5e-05 Score=64.66 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=74.6
Q ss_pred CCceEEEEeCCCCCCChh-HHHHHHHHHHcCc--EEEEeccCCCCCCCCC-chhhHHHHHHHHhhhhhhhcCCccccCCC
Q 043492 11 GKYEVILFFPGTSVSNTS-YSKLFDHLASHGY--IVVSPQLYNLMPPKGN-KEVDAAAEEINWLPKGLQSHLPENVVADL 86 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~-~~~l~~~Las~Gy--~Vv~~d~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~d~ 86 (278)
.+..++||+||+..+.+. ....++.....|| .|+.+.+|..+..... .+..........|.+-+..+.. ....
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~---~~~~ 92 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLAR---APGI 92 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHh---ccCC
Confidence 456799999999987553 3444444444444 7888888765432110 0111111111111111211111 1356
Q ss_pred CceEEEEeChhHHHHHHHHhhCCCCCC---CCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEEecCC
Q 043492 87 NYSALMGHSRGGLTAFALAQGYATNPP---LGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIGTGL 160 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~~~~~~---~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~g~~ 160 (278)
.+|.+++||||+.+.+.+......... ...++..++++.|-.....-.... . ...+...++.+.+..+
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~-~-----~~~~~~~~itvy~s~~ 163 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQL-P-----DLGSSARRITVYYSRN 163 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHH-H-----HHhhcCCCEEEEEcCC
Confidence 799999999999999988765332211 112677888777543321000000 0 0023456777777777
No 147
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.13 E-value=1.4e-05 Score=66.59 Aligned_cols=104 Identities=19% Similarity=0.165 Sum_probs=75.6
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEE
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMG 93 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~G 93 (278)
|+++++|+.+|....|..|+..|... ..|+.++.++.+.. .....++.++.+....++.+.-+ ...+.|.|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP------~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQP------EGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCC------CCCEEEEe
Confidence 57899999999999999999999999 99999998877531 22223344444443333444333 34899999
Q ss_pred eChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 94 HSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 94 hS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
+|+||.+|..+|.+--.. +..+..++.+|++..
T Consensus 72 ~S~GG~vA~evA~qL~~~---G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQ---GEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhC---CCeEEEEEEeccCCC
Confidence 999999999999864321 125777888887765
No 148
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.06 E-value=1.9e-05 Score=66.04 Aligned_cols=115 Identities=21% Similarity=0.303 Sum_probs=66.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHH-HcCc----EEEEeccCCC----C--CCC---------CCchh-hHHHHHHHHh
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLA-SHGY----IVVSPQLYNL----M--PPK---------GNKEV-DAAAEEINWL 70 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~La-s~Gy----~Vv~~d~~~~----~--~~~---------~~~~~-~~~~~~~~~l 70 (278)
..-..||+||++++...+..+++.+. ++|. .++-++--|. | ... .+... .+...-..||
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34467899999999999999999997 6553 2333333332 1 000 01112 3455556665
Q ss_pred hhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC-cCCCC
Q 043492 71 PKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD-PVAGI 130 (278)
Q Consensus 71 ~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~-p~~~~ 130 (278)
.+-+..+ ..+...+++-++||||||..++.++..+.... .-.+++.+|.|. |+.+.
T Consensus 90 ~~vl~~L---~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~-~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 90 KKVLKYL---KKKYHFKKFNLVGHSMGGLSWTYYLENYGNDK-NLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHH---HHCC--SEEEEEEETHHHHHHHHHHHHCTTGT-TS-EEEEEEEES--TTTT
T ss_pred HHHHHHH---HHhcCCCEEeEEEECccHHHHHHHHHHhccCC-CCcccceEEEeccccCcc
Confidence 5443332 22357889999999999999999988764311 011567777655 66654
No 149
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.05 E-value=2.3e-05 Score=80.44 Aligned_cols=104 Identities=17% Similarity=0.054 Sum_probs=71.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
..|.++++||++++...|..+++.|..+ +.|++++.+|.+.+. ....++.++.+++...+.... ...++.+
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~------~~~p~~l 1137 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQ------PHGPYHL 1137 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhC------CCCCEEE
Confidence 3467999999999999999999999765 999999998875432 122345555554433333211 1247999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
+|||+||.+|..+|....+.. .++..++.++++
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~---~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARG---EEVAFLGLLDTW 1170 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcC---CceeEEEEecCC
Confidence 999999999999988632211 156667766653
No 150
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.00 E-value=0.00011 Score=64.28 Aligned_cols=119 Identities=14% Similarity=0.140 Sum_probs=67.7
Q ss_pred EEEe-cCC--CCCceEEEEeCCCCCCC----hhH---HHHHHHHHHcCcEEEEeccCCCC-CCCCCchhhHHHHHHHHhh
Q 043492 3 FIVF-PDN--QGKYEVILFFPGTSVSN----TSY---SKLFDHLASHGYIVVSPQLYNLM-PPKGNKEVDAAAEEINWLP 71 (278)
Q Consensus 3 ~i~~-P~~--~~~~Pvvv~~hG~~~~~----~~~---~~l~~~Las~Gy~Vv~~d~~~~~-~~~~~~~~~~~~~~~~~l~ 71 (278)
+++. |.. .+.-|+|||+||+|-.- ..+ ..+-..|- ...++++|+.-.. ...+..-+..+.+++.-..
T Consensus 109 Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~ 186 (374)
T PF10340_consen 109 WLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYD 186 (374)
T ss_pred EEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHH
Confidence 4555 654 23469999999999322 222 22222233 3578888864322 1112222333444433321
Q ss_pred hhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCC
Q 043492 72 KGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIP 131 (278)
Q Consensus 72 ~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~ 131 (278)
. + ... .+-++|.|+|-|+||.+++.+...-.... .-...+.+++++||....
T Consensus 187 ~-L---v~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~-~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 187 Y-L---VES---EGNKNIILMGDSAGGNLALSFLQYLKKPN-KLPYPKSAILISPWVNLV 238 (374)
T ss_pred H-H---Hhc---cCCCeEEEEecCccHHHHHHHHHHHhhcC-CCCCCceeEEECCCcCCc
Confidence 1 1 101 23479999999999999998877533211 112457899999999763
No 151
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.99 E-value=2.8e-05 Score=72.62 Aligned_cols=99 Identities=19% Similarity=0.237 Sum_probs=68.3
Q ss_pred EEEecCCCCC--ceEEEEeCCCC---CCChhH--HHHHHHHHHcCcEEEEeccC-CC-C--CC-----CCCchhhHHHHH
Q 043492 3 FIVFPDNQGK--YEVILFFPGTS---VSNTSY--SKLFDHLASHGYIVVSPQLY-NL-M--PP-----KGNKEVDAAAEE 66 (278)
Q Consensus 3 ~i~~P~~~~~--~Pvvv~~hG~~---~~~~~~--~~l~~~Las~Gy~Vv~~d~~-~~-~--~~-----~~~~~~~~~~~~ 66 (278)
-||.|..... .||+||+||++ ++...+ ......+..+..+||.++++ |. | .. .+.....|...+
T Consensus 100 NV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~A 179 (545)
T KOG1516|consen 100 NVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLA 179 (545)
T ss_pred EEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHH
Confidence 4678875543 89999999998 332223 23344455567888889974 31 1 11 123345688889
Q ss_pred HHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHh
Q 043492 67 INWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 67 ~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~ 106 (278)
+.|+.+++...- -|+++|.|+|||.||..+..++.
T Consensus 180 L~wv~~~I~~FG-----Gdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 180 LRWVKDNIPSFG-----GDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHHHHhcC-----CCCCeEEEEeechhHHHHHHHhc
Confidence 999887776643 48999999999999999877665
No 152
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.99 E-value=5.1e-05 Score=64.81 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=63.8
Q ss_pred CCceEEEEeCCCCCCChhH-------HHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCcccc
Q 043492 11 GKYEVILFFPGTSVSNTSY-------SKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVV 83 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~-------~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 83 (278)
.+...|+++-|.+..-+.+ ..+.+..-..|-.|+..++||.+.+.+.....++...-. ..++.+.+....
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~---a~v~yL~d~~~G 211 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQ---ACVRYLRDEEQG 211 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHH---HHHHHHHhcccC
Confidence 4556899999988765552 234444445699999999999987765544333322221 123333343445
Q ss_pred CCCCceEEEEeChhHHHHHHHHhhC
Q 043492 84 ADLNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
+..++|++.|||+||.++..+..+.
T Consensus 212 ~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 212 PKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CChheEEEeeccccHHHHHHHHHhc
Confidence 6788999999999999999876654
No 153
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.97 E-value=9.7e-05 Score=67.25 Aligned_cols=176 Identities=19% Similarity=0.163 Sum_probs=110.5
Q ss_pred CcEEEecCC--CCCceEEEEeCCCCCCC--hhHHHHHHHHHHcCcEEEEeccCCCCCCC-----------CCchhhHHHH
Q 043492 1 PLFIVFPDN--QGKYEVILFFPGTSVSN--TSYSKLFDHLASHGYIVVSPQLYNLMPPK-----------GNKEVDAAAE 65 (278)
Q Consensus 1 p~~i~~P~~--~~~~Pvvv~~hG~~~~~--~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----------~~~~~~~~~~ 65 (278)
|.+|.. +. ..+.|++++.-|+-.-+ -.|+...+.+.++|.+-+..+.+|-|.-+ ...-..|...
T Consensus 408 PYFiv~-K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~A 486 (648)
T COG1505 408 PYFIVR-KGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIA 486 (648)
T ss_pred cEEEEe-cCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHH
Confidence 456665 32 23678877766655322 25666668899999999999999865322 1222345555
Q ss_pred HHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCC----CCCC---
Q 043492 66 EINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFH----SELD--- 138 (278)
Q Consensus 66 ~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~----~~~~--- 138 (278)
+..+|.+ .+.--++++++.|-|-||.++-.+..+.|+ .+.|++.-.|+..+..-. +..+
T Consensus 487 VaedLi~--------rgitspe~lgi~GgSNGGLLvg~alTQrPe------lfgA~v~evPllDMlRYh~l~aG~sW~~E 552 (648)
T COG1505 487 VAEDLIK--------RGITSPEKLGIQGGSNGGLLVGAALTQRPE------LFGAAVCEVPLLDMLRYHLLTAGSSWIAE 552 (648)
T ss_pred HHHHHHH--------hCCCCHHHhhhccCCCCceEEEeeeccChh------hhCceeeccchhhhhhhcccccchhhHhh
Confidence 5555532 122346799999999999999998888998 678888888877653210 0000
Q ss_pred ------CC----ccccCc-cCC-----CCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhc---CCcceeEEecCCCc
Q 043492 139 ------PP----ILDYES-FNF-----SIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCT---SSDRAHFDATYYGH 199 (278)
Q Consensus 139 ------~~----~~~~~~-~~~-----~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~---~~~~~~~~~~g~~H 199 (278)
|. +..|.+ .++ -.|+||-++.+| |.+.|.. ..+++.+++ .+. ++.+-.++||
T Consensus 553 YG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~D------DRVHPaH--arKfaa~L~e~~~pv-~~~e~t~gGH 623 (648)
T COG1505 553 YGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHD------DRVHPAH--ARKFAAKLQEVGAPV-LLREETKGGH 623 (648)
T ss_pred cCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEccccc------ccccchH--HHHHHHHHHhcCCce-EEEeecCCcc
Confidence 00 011111 122 358888888885 8888862 444555553 333 7777789999
Q ss_pred c
Q 043492 200 M 200 (278)
Q Consensus 200 ~ 200 (278)
+
T Consensus 624 ~ 624 (648)
T COG1505 624 G 624 (648)
T ss_pred c
Confidence 8
No 154
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.95 E-value=9.2e-05 Score=63.80 Aligned_cols=96 Identities=17% Similarity=0.169 Sum_probs=67.1
Q ss_pred EEecCC--CCCceEEEEeCCCCCCChhH--HHHHHHHHHcCcEEEEeccCCCCCCC--C-----C-----------chhh
Q 043492 4 IVFPDN--QGKYEVILFFPGTSVSNTSY--SKLFDHLASHGYIVVSPQLYNLMPPK--G-----N-----------KEVD 61 (278)
Q Consensus 4 i~~P~~--~~~~Pvvv~~hG~~~~~~~~--~~l~~~Las~Gy~Vv~~d~~~~~~~~--~-----~-----------~~~~ 61 (278)
+..|.. ....|++|.++|.|...... .-+++.|.+.|+..+.++.+..+... . . ..+.
T Consensus 81 ~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~ 160 (348)
T PF09752_consen 81 LLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATIL 160 (348)
T ss_pred EEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHH
Confidence 345654 35789999999999755433 33489999999999999976654321 1 0 1122
Q ss_pred HHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 62 AAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 62 ~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
+...++.|+.+ -...++++.|.||||.+|..++...++
T Consensus 161 E~~~Ll~Wl~~-----------~G~~~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 161 ESRALLHWLER-----------EGYGPLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred HHHHHHHHHHh-----------cCCCceEEEEechhHhhHHhhhhcCCC
Confidence 33445555432 155699999999999999999998886
No 155
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.94 E-value=9.5e-05 Score=62.73 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=38.2
Q ss_pred EEEecCCC---CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 3 FIVFPDNQ---GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 3 ~i~~P~~~---~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
.++.|... +++|.+++.||+++........+..++.+++.++..+.
T Consensus 36 ~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 36 VLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred EEEecCCCCccccCceEEeccCccccccCcchHHHHhhhceeEEeeecc
Confidence 45666644 58999999999999888776699999999999988875
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.88 E-value=0.00077 Score=61.55 Aligned_cols=202 Identities=13% Similarity=0.097 Sum_probs=109.6
Q ss_pred CceEEEEeCCCC---CCChhHHHHHHHHHHcCcEEEE--eccCCCCCCCCCchhhHHHHHHHHhhhhhh-hcCCccccCC
Q 043492 12 KYEVILFFPGTS---VSNTSYSKLFDHLASHGYIVVS--PQLYNLMPPKGNKEVDAAAEEINWLPKGLQ-SHLPENVVAD 85 (278)
Q Consensus 12 ~~Pvvv~~hG~~---~~~~~~~~l~~~Las~Gy~Vv~--~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~d 85 (278)
-.|++|+.||.. -....|..|-+.|.-.|-+|-. +|+... -++ ..+...+..+..-.+ ..+...+.+-
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~--igG----~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP--IGG----ANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC--CCC----cchHHHHHHHHHHhhhhhhhhhccCC
Confidence 468999999998 2233445555556555644433 333211 111 112222222211111 1122234456
Q ss_pred CCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEEecCCCCCcC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIGTGLGGLAK 165 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~g~~~~~~~ 165 (278)
-..|.|+|.|||..+++.....+.+ ..++++|.+.=-+....++..+....+ ..++.|+|++.|.+|
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsd-----v~V~~vVCigypl~~vdgprgirDE~L----ldmk~PVLFV~Gsnd---- 315 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSD-----VEVDAVVCIGYPLDTVDGPRGIRDEAL----LDMKQPVLFVIGSND---- 315 (784)
T ss_pred CCceEEEecccCceeeEEeccccCC-----ceEEEEEEecccccCCCcccCCcchhh----HhcCCceEEEecCCc----
Confidence 6799999999997776666654433 257888876522221111112211111 468999999999994
Q ss_pred CCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHH
Q 043492 166 CVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAY 245 (278)
Q Consensus 166 ~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~ 245 (278)
..|.+. ...+.-++++... .++++.+++|. |-=... ... ..| .-...+...+...+.+|....
T Consensus 316 --~mcspn--~ME~vreKMqA~~-elhVI~~adhs-maipk~-k~e---------seg-ltqseVd~~i~~aI~efvt~~ 378 (784)
T KOG3253|consen 316 --HMCSPN--SMEEVREKMQAEV-ELHVIGGADHS-MAIPKR-KVE---------SEG-LTQSEVDSAIAQAIKEFVTIA 378 (784)
T ss_pred --ccCCHH--HHHHHHHHhhccc-eEEEecCCCcc-ccCCcc-ccc---------ccc-ccHHHHHHHHHHHHHHHHHHh
Confidence 335443 3445567777777 89999999996 311100 000 011 234555556667777777776
Q ss_pred hcCC
Q 043492 246 FDSE 249 (278)
Q Consensus 246 l~~~ 249 (278)
|...
T Consensus 379 l~c~ 382 (784)
T KOG3253|consen 379 LNCT 382 (784)
T ss_pred hcCC
Confidence 6543
No 157
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.86 E-value=0.0021 Score=56.50 Aligned_cols=200 Identities=18% Similarity=0.206 Sum_probs=118.9
Q ss_pred cEEEecCC-CCCceEEEEeCCCC------CCChhHHHHHHHHHHc-CcEEEEecc-CCCC--CC-CCCchhhH-------
Q 043492 2 LFIVFPDN-QGKYEVILFFPGTS------VSNTSYSKLFDHLASH-GYIVVSPQL-YNLM--PP-KGNKEVDA------- 62 (278)
Q Consensus 2 ~~i~~P~~-~~~~Pvvv~~hG~~------~~~~~~~~l~~~Las~-Gy~Vv~~d~-~~~~--~~-~~~~~~~~------- 62 (278)
+.|+.|.. ......++++.|+. .........++.+|.. |-+|+.+.. +..- .. +.....+|
T Consensus 52 l~I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAytW 131 (367)
T PF10142_consen 52 LTIYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAYTW 131 (367)
T ss_pred EEEEECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHHHH
Confidence 57899987 66777888888876 1223455667777765 777777554 3221 00 11111111
Q ss_pred --------------------HHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEE
Q 043492 63 --------------------AAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALV 122 (278)
Q Consensus 63 --------------------~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v 122 (278)
..++++. +++.+.....++.++.+|.|.|==|.++...|..++ |+++++
T Consensus 132 ~~fl~~~d~~w~l~~PMtka~vrAMD~----vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D~-------RV~aiv 200 (367)
T PF10142_consen 132 RKFLETGDPEWPLHLPMTKAAVRAMDA----VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVDP-------RVKAIV 200 (367)
T ss_pred HHHhccCCccchhhhhHHHHHHHHHHH----HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccCc-------ceeEEe
Confidence 1112222 222222234568899999999999999999999777 566665
Q ss_pred ecC-cCCCC---------CCCCCCCCCCcccc---------------------Cc----cCCCCCeEEEecCCCCCcCCC
Q 043492 123 GVD-PVAGI---------PYFHSELDPPILDY---------------------ES----FNFSIPVTVIGTGLGGLAKCV 167 (278)
Q Consensus 123 ~~~-p~~~~---------~~~~~~~~~~~~~~---------------------~~----~~~~~P~Lii~g~~~~~~~~~ 167 (278)
-+. +...+ .++ +.....+..| ++ ..+++|-++|.|..|
T Consensus 201 P~Vid~LN~~~~l~h~y~~yG-~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgD------ 273 (367)
T PF10142_consen 201 PIVIDVLNMKANLEHQYRSYG-GNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGD------ 273 (367)
T ss_pred eEEEccCCcHHHHHHHHHHhC-CCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCC------
Confidence 321 11110 000 0111111111 11 468999999999995
Q ss_pred CCCCCccccHHHHHHHhcCCcceeEEecCCCccccCCCCCcchhhhcccccccCCCCCCchhHHHHhhHHHHHHHHHHhc
Q 043492 168 VPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLDDCPPDLKSLAISKCMCTNGTLPRQPMRQCVSGIAVAFLKAYFD 247 (278)
Q Consensus 168 d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~afl~~~l~ 247 (278)
+.+.|. ...-+|+.+++++ ++..+|+++|... . ..+..-+.+|+...+.
T Consensus 274 eFf~pD--~~~~y~d~L~G~K-~lr~vPN~~H~~~------------------------~----~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 274 EFFVPD--SSNFYYDKLPGEK-YLRYVPNAGHSLI------------------------G----SDVVQSLRAFYNRIQN 322 (367)
T ss_pred ceeccC--chHHHHhhCCCCe-eEEeCCCCCcccc------------------------h----HHHHHHHHHHHHHHHc
Confidence 345554 2455789999877 9999999999711 0 2233458889998888
Q ss_pred CCh
Q 043492 248 SEG 250 (278)
Q Consensus 248 ~~~ 250 (278)
|.+
T Consensus 323 ~~~ 325 (367)
T PF10142_consen 323 GRP 325 (367)
T ss_pred CCC
Confidence 875
No 158
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.80 E-value=0.00056 Score=63.18 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=77.6
Q ss_pred CcEEEecC---CCCCceEEEEeCCCCCCC--hhHHHHHHHHHHcCcEEEEeccCCCCCCC-----------CCchhhHHH
Q 043492 1 PLFIVFPD---NQGKYEVILFFPGTSVSN--TSYSKLFDHLASHGYIVVSPQLYNLMPPK-----------GNKEVDAAA 64 (278)
Q Consensus 1 p~~i~~P~---~~~~~Pvvv~~hG~~~~~--~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----------~~~~~~~~~ 64 (278)
|+.+++-+ -.++.|++++.-|..|.. ..++...--|..+||+-.+.--+|-+.-+ ......|+-
T Consensus 433 PVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFI 512 (682)
T COG1770 433 PVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFI 512 (682)
T ss_pred eEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHH
Confidence 44444433 356889999999988754 34555556688999877766667754322 111223333
Q ss_pred HHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 65 EEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 65 ~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
++.+.|.+ .+..+.++|+++|-|.||++...++...|+ .++++|+..|+..
T Consensus 513 a~a~~Lv~--------~g~~~~~~i~a~GGSAGGmLmGav~N~~P~------lf~~iiA~VPFVD 563 (682)
T COG1770 513 AAARHLVK--------EGYTSPDRIVAIGGSAGGMLMGAVANMAPD------LFAGIIAQVPFVD 563 (682)
T ss_pred HHHHHHHH--------cCcCCccceEEeccCchhHHHHHHHhhChh------hhhheeecCCccc
Confidence 33333322 244567899999999999999999988887 7899999888764
No 159
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.80 E-value=0.00029 Score=61.85 Aligned_cols=101 Identities=17% Similarity=0.100 Sum_probs=57.5
Q ss_pred EEEecCCCC--CceEEEEeCCCCC-----CChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHH-HHhhhhh
Q 043492 3 FIVFPDNQG--KYEVILFFPGTSV-----SNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEI-NWLPKGL 74 (278)
Q Consensus 3 ~i~~P~~~~--~~Pvvv~~hG~~~-----~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~-~~l~~~l 74 (278)
..|.|..+. +.|++++ |-+-- .-.--..+++.|.++|..|..++.++-+...... ..++.+ +.+.+.+
T Consensus 96 iqy~p~~e~v~~~PlLiV-pP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~---~~edYi~e~l~~ai 171 (445)
T COG3243 96 IQYKPLTEKVLKRPLLIV-PPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAK---NLEDYILEGLSEAI 171 (445)
T ss_pred hccCCCCCccCCCceEee-ccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhc---cHHHHHHHHHHHHH
Confidence 346676543 5555554 44332 1223467899999999999999986543222211 111111 1111111
Q ss_pred hhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 75 QSHLPENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 75 ~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
..+.+ ....++|-++|||.||.+...++...+.
T Consensus 172 d~v~~---itg~~~InliGyCvGGtl~~~ala~~~~ 204 (445)
T COG3243 172 DTVKD---ITGQKDINLIGYCVGGTLLAAALALMAA 204 (445)
T ss_pred HHHHH---HhCccccceeeEecchHHHHHHHHhhhh
Confidence 11111 1234689999999999998888776554
No 160
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.79 E-value=0.00024 Score=59.77 Aligned_cols=118 Identities=19% Similarity=0.287 Sum_probs=68.0
Q ss_pred EEEecCC---CCCceEEEEeCCCCCCCh-hHHHHHHHHHHc----CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhh
Q 043492 3 FIVFPDN---QGKYEVILFFPGTSVSNT-SYSKLFDHLASH----GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGL 74 (278)
Q Consensus 3 ~i~~P~~---~~~~Pvvv~~hG~~~~~~-~~~~l~~~Las~----Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l 74 (278)
.+|.|.+ ..++||+++.||-..... ....+.+.|... .-++|.+|.-...... .........+..|.+.+
T Consensus 85 vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~--~~~~~n~~~~~~L~~eL 162 (299)
T COG2382 85 VVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRR--EELHCNEAYWRFLAQEL 162 (299)
T ss_pred EEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHH--HHhcccHHHHHHHHHHh
Confidence 5677764 348999999998653322 122334444443 4677777753211000 00001112222222222
Q ss_pred hhcCCcc--ccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 75 QSHLPEN--VVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 75 ~~~~~~~--~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
-..++.. ..-+.++-+|+|-|+||.+++.++..+|+ .+.-++..+|..
T Consensus 163 lP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe------~FG~V~s~Sps~ 212 (299)
T COG2382 163 LPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPE------RFGHVLSQSGSF 212 (299)
T ss_pred hhhhhccCcccccCCCcEEeccccccHHHHHHHhcCch------hhceeeccCCcc
Confidence 2222211 12355678999999999999999999998 788888888755
No 161
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.75 E-value=4.1e-05 Score=66.08 Aligned_cols=96 Identities=17% Similarity=0.239 Sum_probs=58.5
Q ss_pred CCceEEEEeCCCCCCChhHHH-------HHHHHHHcC-------cEEEEeccCCCCC-CCCC----ch--h--h--HHHH
Q 043492 11 GKYEVILFFPGTSVSNTSYSK-------LFDHLASHG-------YIVVSPQLYNLMP-PKGN----KE--V--D--AAAE 65 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~-------l~~~Las~G-------y~Vv~~d~~~~~~-~~~~----~~--~--~--~~~~ 65 (278)
.+-.+|+++|++.++...... |-+.|..-| |-||+.|..|.+. +... .. . . -.-.
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 456799999999997765441 334444433 9999999987641 1110 00 0 0 0111
Q ss_pred HHHHhhhhhhhcCCccccCCCCceE-EEEeChhHHHHHHHHhhCCC
Q 043492 66 EINWLPKGLQSHLPENVVADLNYSA-LMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 66 ~~~~l~~~l~~~~~~~~~~d~~~i~-l~GhS~GG~~a~~~a~~~~~ 110 (278)
+.|++..+ +.+++ .+..+++. |+|-||||+.|+.++..+|+
T Consensus 129 i~D~V~aq-~~ll~---~LGI~~l~avvGgSmGGMqaleWa~~yPd 170 (368)
T COG2021 129 IRDMVRAQ-RLLLD---ALGIKKLAAVVGGSMGGMQALEWAIRYPD 170 (368)
T ss_pred HHHHHHHH-HHHHH---hcCcceEeeeeccChHHHHHHHHHHhChH
Confidence 22332111 11122 25666776 89999999999999999987
No 162
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.71 E-value=0.00023 Score=64.95 Aligned_cols=121 Identities=15% Similarity=0.073 Sum_probs=67.8
Q ss_pred CCCCceEEEEeCCCCCCChhHHHHHH------------------HHHHcCcEEEEecc-CCCCCCCCC--chhhHHHHHH
Q 043492 9 NQGKYEVILFFPGTSVSNTSYSKLFD------------------HLASHGYIVVSPQL-YNLMPPKGN--KEVDAAAEEI 67 (278)
Q Consensus 9 ~~~~~Pvvv~~hG~~~~~~~~~~l~~------------------~Las~Gy~Vv~~d~-~~~~~~~~~--~~~~~~~~~~ 67 (278)
.....|+|+|++|+.|.+..+..+.+ -+.++ ..++.+|. .|.|.+... ....+..++.
T Consensus 73 ~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a 151 (462)
T PTZ00472 73 GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYADKADYDHNESEVS 151 (462)
T ss_pred CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccCCCCCCCCChHHHH
Confidence 34578999999999887654422211 13333 45666675 455544321 1111112222
Q ss_pred HHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCC----CCCCcccceEEecCcCCCC
Q 043492 68 NWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATN----PPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 68 ~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~----~~~~~~~~a~v~~~p~~~~ 130 (278)
+.+..-+...+.....+...++.|+|||+||..+..++..--+. ....+.+++++.-+|+...
T Consensus 152 ~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 152 EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 22212122222222334567999999999999988877653211 1123678999988887754
No 163
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.70 E-value=0.00013 Score=63.85 Aligned_cols=99 Identities=17% Similarity=0.165 Sum_probs=66.7
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcE---EEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYI---VVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~---Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
.++++||++.....+..+...+++.|+. |..+++.+... .........++...+. ..+.. ....++.+
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~ql~~~V~----~~l~~---~ga~~v~L 131 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDG--TYSLAVRGEQLFAYVD----EVLAK---TGAKKVNL 131 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCC--CccccccHHHHHHHHH----HHHhh---cCCCceEE
Confidence 7899999988888999999889999998 88888765411 1111122333333322 22221 23479999
Q ss_pred EEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc
Q 043492 92 MGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
+|||+||.++..++...+.. .+++.++.+.+
T Consensus 132 igHS~GG~~~ry~~~~~~~~----~~V~~~~tl~t 162 (336)
T COG1075 132 IGHSMGGLDSRYYLGVLGGA----NRVASVVTLGT 162 (336)
T ss_pred EeecccchhhHHHHhhcCcc----ceEEEEEEecc
Confidence 99999999999888877632 15666666553
No 164
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.64 E-value=0.0014 Score=55.16 Aligned_cols=108 Identities=13% Similarity=0.126 Sum_probs=62.3
Q ss_pred CCceEEEEeCCCCCCChh-HHH-----HHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccC
Q 043492 11 GKYEVILFFPGTSVSNTS-YSK-----LFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVA 84 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~-~~~-----l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 84 (278)
+++|++|=.|-.|-+..+ +.. -.+.+.++ |.++=+|.+|+.............--++.|.+.+..+++. +
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~---f 96 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDH---F 96 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHH---H
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHh---C
Confidence 368999999999977654 333 34556666 9999999999743211100001111233333333333332 4
Q ss_pred CCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
..+.+.-+|--.|+.+-..+|..+|+ ++-++|+++|..
T Consensus 97 ~lk~vIg~GvGAGAnIL~rfAl~~p~------~V~GLiLvn~~~ 134 (283)
T PF03096_consen 97 GLKSVIGFGVGAGANILARFALKHPE------RVLGLILVNPTC 134 (283)
T ss_dssp T---EEEEEETHHHHHHHHHHHHSGG------GEEEEEEES---
T ss_pred CccEEEEEeeccchhhhhhccccCcc------ceeEEEEEecCC
Confidence 66789999999999999999999998 899999988866
No 165
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.62 E-value=0.0016 Score=56.95 Aligned_cols=85 Identities=14% Similarity=0.110 Sum_probs=58.7
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccC-CCCCCCC-CchhhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLY-NLMPPKG-NKEVDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~-~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
.--+-||..|=||-+..-..++++|+++|+-||.+|.. ++..... +....|..+++...... -...++
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~----------w~~~~~ 328 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARR----------WGAKRV 328 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHh----------hCcceE
Confidence 44567888888888888899999999999999999973 4332221 12234555555553222 245699
Q ss_pred EEEEeChhHHHHHHHHh
Q 043492 90 ALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~ 106 (278)
.|+|+|+|+-+--.+-.
T Consensus 329 ~liGySfGADvlP~~~n 345 (456)
T COG3946 329 LLIGYSFGADVLPFAYN 345 (456)
T ss_pred EEEeecccchhhHHHHH
Confidence 99999999986544433
No 166
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.58 E-value=0.0014 Score=53.85 Aligned_cols=99 Identities=21% Similarity=0.250 Sum_probs=57.9
Q ss_pred EEEecCCCCCceEEEEeCCCCC--CC-hhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCC
Q 043492 3 FIVFPDNQGKYEVILFFPGTSV--SN-TSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLP 79 (278)
Q Consensus 3 ~i~~P~~~~~~Pvvv~~hG~~~--~~-~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 79 (278)
++..|. .+..+|=|+-|... .+ -.|+.+.+.|++.||+|++.-+.- + -+...-+.++...+...+..+..
T Consensus 9 wvl~P~--~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t----fDH~~~A~~~~~~f~~~~~~L~~ 81 (250)
T PF07082_consen 9 WVLIPP--RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T----FDHQAIAREVWERFERCLRALQK 81 (250)
T ss_pred EEEeCC--CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C----CcHHHHHHHHHHHHHHHHHHHHH
Confidence 455665 45667777766552 22 389999999999999999966521 1 11222233333332222221111
Q ss_pred ccccCCC--CceEEEEeChhHHHHHHHHhhCC
Q 043492 80 ENVVADL--NYSALMGHSRGGLTAFALAQGYA 109 (278)
Q Consensus 80 ~~~~~d~--~~i~l~GhS~GG~~a~~~a~~~~ 109 (278)
. ..++. -.+.=+|||+|+.+-+.+.....
T Consensus 82 ~-~~~~~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 82 R-GGLDPAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred h-cCCCcccCCeeeeecccchHHHHHHhhhcc
Confidence 1 11222 26777999999999888876543
No 167
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.55 E-value=0.00029 Score=60.14 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=68.0
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhh-hhhhcCCccccCCCCceE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPK-GLQSHLPENVVADLNYSA 90 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~~~~~~d~~~i~ 90 (278)
...+||++-|..|.-+. -....=+..||.|+..+|+|+..+.+......-..++|.+.+ .++. -.+..+.|+
T Consensus 242 gq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~-----Lgf~~edIi 314 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQV-----LGFRQEDII 314 (517)
T ss_pred CceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHH-----cCCCccceE
Confidence 45689999998765431 122334667999999999998766544332222222222111 1221 124567999
Q ss_pred EEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 91 LMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 91 l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
++|.|-||..++++|..+| ++|++|+-..++
T Consensus 315 lygWSIGGF~~~waAs~YP-------dVkavvLDAtFD 345 (517)
T KOG1553|consen 315 LYGWSIGGFPVAWAASNYP-------DVKAVVLDATFD 345 (517)
T ss_pred EEEeecCCchHHHHhhcCC-------CceEEEeecchh
Confidence 9999999999999999999 588988755444
No 168
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.28 E-value=0.0044 Score=50.78 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=67.2
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHc-C--cEEEEeccCCCCCCC---C---CchhhHHHHHHHHhhh---hhhhcC
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASH-G--YIVVSPQLYNLMPPK---G---NKEVDAAAEEINWLPK---GLQSHL 78 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~-G--y~Vv~~d~~~~~~~~---~---~~~~~~~~~~~~~l~~---~l~~~~ 78 (278)
...+.|++++|..|....|..++++|-+. + +.|..+.|.++.... . .-...+.-.+-+++.- -++..+
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 46899999999999999999999998775 2 347777776653211 0 0001111122222111 122222
Q ss_pred CccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 79 PENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 79 ~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
+ -..++.++|||-|+++.+......... .++..++.+-|..
T Consensus 107 P-----k~~ki~iiGHSiGaYm~Lqil~~~k~~----~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 107 P-----KDRKIYIIGHSIGAYMVLQILPSIKLV----FSVQKAVLLFPTI 147 (301)
T ss_pred C-----CCCEEEEEecchhHHHHHHHhhhcccc----cceEEEEEecchH
Confidence 2 345999999999999999998754321 2455555555543
No 169
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.20 E-value=0.0026 Score=54.94 Aligned_cols=108 Identities=14% Similarity=0.095 Sum_probs=63.1
Q ss_pred CceEEEEeCCCCCCC-hhHHHHHHHHHHcCcEEEE--eccCCCCC----CC-CCch---hhHHHHHHHHhhhhhhhcCCc
Q 043492 12 KYEVILFFPGTSVSN-TSYSKLFDHLASHGYIVVS--PQLYNLMP----PK-GNKE---VDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~-~~~~~l~~~Las~Gy~Vv~--~d~~~~~~----~~-~~~~---~~~~~~~~~~l~~~l~~~~~~ 80 (278)
..-+++|+||++-+- ..-...++...+.|+..+. +.++..+. .. .+.. ...++.++..|.+ .
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~-------~ 187 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLAT-------D 187 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHh-------C
Confidence 456999999998544 3455677777777765544 44443221 11 1111 1123333444322 1
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCCC--CCcccceEEecCcCCC
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNPP--LGLKFSALVGVDPVAG 129 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~--~~~~~~a~v~~~p~~~ 129 (278)
....+|.|++||||..+++....+..-... ...+++-+|+.+|=..
T Consensus 188 ---~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 188 ---KPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred ---CCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 235699999999999999988765322111 2346788888776443
No 170
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.07 E-value=0.003 Score=59.57 Aligned_cols=92 Identities=17% Similarity=0.221 Sum_probs=47.0
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHH----------------cCcEEEEeccCCC-CCCCCCc---hhhHHHHHHHHhhhh
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLAS----------------HGYIVVSPQLYNL-MPPKGNK---EVDAAAEEINWLPKG 73 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las----------------~Gy~Vv~~d~~~~-~~~~~~~---~~~~~~~~~~~l~~~ 73 (278)
=.|+|++|..|+-+.-+.+|...+. .-|.-.++|+.+- ..-++.. ..+...+++..+.+-
T Consensus 90 IPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~ILsl 169 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYILSL 169 (973)
T ss_pred ceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhHHHHHHHHHHHHHHHHHH
Confidence 3589999999998777776655442 1244444444221 1111111 111122222222111
Q ss_pred hhhcCCccccCCCCceEEEEeChhHHHHHHHHh
Q 043492 74 LQSHLPENVVADLNYSALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 74 l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~ 106 (278)
.+. -.+....-+..|+++||||||.+|...+.
T Consensus 170 Yr~-~~e~~~p~P~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 170 YRG-EREYASPLPHSVILVGHSMGGIVARATLT 201 (973)
T ss_pred hhc-ccccCCCCCceEEEEeccchhHHHHHHHh
Confidence 111 00111223678999999999998877664
No 171
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.04 E-value=0.011 Score=52.29 Aligned_cols=46 Identities=13% Similarity=0.286 Sum_probs=32.3
Q ss_pred ecCCCCCceEEEEeCCCCCCCh--hHHHHHHHHHHc-CcEEEEeccCCC
Q 043492 6 FPDNQGKYEVILFFPGTSVSNT--SYSKLFDHLASH-GYIVVSPQLYNL 51 (278)
Q Consensus 6 ~P~~~~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~-Gy~Vv~~d~~~~ 51 (278)
+...+....+|+++.|+|++.. .+..+.+.+|+. +.+|+.+++.+.
T Consensus 28 ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf 76 (403)
T PF11144_consen 28 YDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCF 76 (403)
T ss_pred cCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeehe
Confidence 3344456679999999998876 356888888886 555555666554
No 172
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.02 E-value=0.0066 Score=48.55 Aligned_cols=91 Identities=23% Similarity=0.207 Sum_probs=55.8
Q ss_pred CCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHH
Q 043492 24 VSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFA 103 (278)
Q Consensus 24 ~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~ 103 (278)
++...|..+++.|... +.|++++.++.+..... ..+.....+.+...+... ....++.++|||+||.++..
T Consensus 10 ~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~------~~~~~~~l~g~s~Gg~~a~~ 80 (212)
T smart00824 10 SGPHEYARLAAALRGR-RDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRA------AGGRPFVLVGHSSGGLLAHA 80 (212)
T ss_pred CcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHh------cCCCCeEEEEECHHHHHHHH
Confidence 5667889999999864 89999999887533211 122333333322222221 12457899999999999988
Q ss_pred HHhhCCCCCCCCcccceEEecCc
Q 043492 104 LAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 104 ~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
.+....... ..++.++.+++
T Consensus 81 ~a~~l~~~~---~~~~~l~~~~~ 100 (212)
T smart00824 81 VAARLEARG---IPPAAVVLLDT 100 (212)
T ss_pred HHHHHHhCC---CCCcEEEEEcc
Confidence 887643211 14556665543
No 173
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.99 E-value=0.00087 Score=61.64 Aligned_cols=116 Identities=20% Similarity=0.233 Sum_probs=78.7
Q ss_pred CcEEEecC---CCCCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCCCCC-----------CCchhhHHH
Q 043492 1 PLFIVFPD---NQGKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLMPPK-----------GNKEVDAAA 64 (278)
Q Consensus 1 p~~i~~P~---~~~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~~~~-----------~~~~~~~~~ 64 (278)
|+.|++-+ ..++.|.+++.+|..+-.- +|..--..|..+|++.+..+.+|-|.-+ ......|..
T Consensus 455 PM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfi 534 (712)
T KOG2237|consen 455 PMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFI 534 (712)
T ss_pred ceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHH
Confidence 56666643 2468899999999876332 3333333456699999999998865432 122334444
Q ss_pred HHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC
Q 043492 65 EEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 65 ~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
..+.+|.+ .+-...+++++.|.|.||.++..++...|+ -++++++-.|+..+
T Consensus 535 a~AeyLve--------~gyt~~~kL~i~G~SaGGlLvga~iN~rPd------LF~avia~VpfmDv 586 (712)
T KOG2237|consen 535 ACAEYLVE--------NGYTQPSKLAIEGGSAGGLLVGACINQRPD------LFGAVIAKVPFMDV 586 (712)
T ss_pred HHHHHHHH--------cCCCCccceeEecccCccchhHHHhccCch------HhhhhhhcCcceeh
Confidence 44444422 234578899999999999999999988887 57888877776643
No 174
>COG3150 Predicted esterase [General function prediction only]
Probab=96.94 E-value=0.005 Score=47.37 Aligned_cols=78 Identities=19% Similarity=0.140 Sum_probs=45.8
Q ss_pred EEEeCCCCCCChhHHH--HHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEE
Q 043492 16 ILFFPGTSVSNTSYSK--LFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMG 93 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~--l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~G 93 (278)
|+|+||+.+|+.+... +.+.+..++-.+ .+-.+ ... .+...++..+.+.+... ..++.+++|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i-~y~~p-----~l~---h~p~~a~~ele~~i~~~-------~~~~p~ivG 65 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDI-EYSTP-----HLP---HDPQQALKELEKAVQEL-------GDESPLIVG 65 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccce-eeecC-----CCC---CCHHHHHHHHHHHHHHc-------CCCCceEEe
Confidence 8999999998887644 345566653222 11111 111 12333333333322221 223599999
Q ss_pred eChhHHHHHHHHhhCC
Q 043492 94 HSRGGLTAFALAQGYA 109 (278)
Q Consensus 94 hS~GG~~a~~~a~~~~ 109 (278)
-|+||+-|.+++....
T Consensus 66 ssLGGY~At~l~~~~G 81 (191)
T COG3150 66 SSLGGYYATWLGFLCG 81 (191)
T ss_pred ecchHHHHHHHHHHhC
Confidence 9999999999998754
No 175
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.91 E-value=0.0053 Score=55.78 Aligned_cols=105 Identities=15% Similarity=0.105 Sum_probs=55.1
Q ss_pred CceEEEEeCCCCCCCh--hHHHHHHHHHH-cCcEEEEeccCCCCCCCCCc-------hhhHHHHHHHHhh---hhhhhcC
Q 043492 12 KYEVILFFPGTSVSNT--SYSKLFDHLAS-HGYIVVSPQLYNLMPPKGNK-------EVDAAAEEINWLP---KGLQSHL 78 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~--~~~~l~~~Las-~Gy~Vv~~d~~~~~~~~~~~-------~~~~~~~~~~~l~---~~l~~~~ 78 (278)
+.|++|++-|-+.-.. ....+...||+ .|-.|++++||..|.+.-.. ...+.++++..+. +.++...
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 4788888866653221 12335555666 49999999998776443111 1112233332221 1222111
Q ss_pred CccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 79 PENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 79 ~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
...+..+++++|-|+||.+|..+-.++|. -+.+.++-+
T Consensus 108 ---~~~~~~pwI~~GgSY~G~Laaw~r~kyP~------~~~ga~ASS 145 (434)
T PF05577_consen 108 ---NTAPNSPWIVFGGSYGGALAAWFRLKYPH------LFDGAWASS 145 (434)
T ss_dssp ---TTGCC--EEEEEETHHHHHHHHHHHH-TT------T-SEEEEET
T ss_pred ---cCCCCCCEEEECCcchhHHHHHHHhhCCC------eeEEEEecc
Confidence 11345699999999999999999999997 455555433
No 176
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.80 E-value=0.0036 Score=55.99 Aligned_cols=88 Identities=17% Similarity=0.127 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHcCcEEE-----E-eccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHH
Q 043492 28 SYSKLFDHLASHGYIVV-----S-PQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTA 101 (278)
Q Consensus 28 ~~~~l~~~Las~Gy~Vv-----~-~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a 101 (278)
.|..+++.|.+.||..- + +|+|-.-. ........|.+.++... ...-++|.|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~--------~~~~~~~~lk~~ie~~~----~~~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA--------ERDEYFTKLKQLIEEAY----KKNGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh--------hHHHHHHHHHHHHHHHH----HhcCCcEEEEEeCCCchHH
Confidence 58999999999998652 1 44433211 11111222211122211 1235699999999999999
Q ss_pred HHHHhhCCCCCCCCcccceEEecCcC
Q 043492 102 FALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 102 ~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
..+....+...-....|+.+|.+++-
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCC
Confidence 99888764321011257888877643
No 177
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.75 E-value=0.0027 Score=57.08 Aligned_cols=120 Identities=14% Similarity=0.010 Sum_probs=63.4
Q ss_pred CCCceEEEEeCCCCCCChhHHHHHHH-------------------HHHcCcEEEEeccC-CCCCCCCCch---hhHHHHH
Q 043492 10 QGKYEVILFFPGTSVSNTSYSKLFDH-------------------LASHGYIVVSPQLY-NLMPPKGNKE---VDAAAEE 66 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~~~l~~~-------------------Las~Gy~Vv~~d~~-~~~~~~~~~~---~~~~~~~ 66 (278)
....|+|||+.|+.|.++.+..+.+. +.+. ..++-+|.| |.|.+..... ..+..++
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGfS~~~~~~~~~~~~~~~ 115 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGFSYGNDPSDYVWNDDQA 115 (415)
T ss_dssp GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT-EESSGGGGS-SHHHH
T ss_pred CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCceEEeeccccccccchhhHH
Confidence 45789999999999877655333221 1112 455666643 5554332111 1122233
Q ss_pred HHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhh----CCCCCCCCcccceEEecCcCCCC
Q 043492 67 INWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQG----YATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 67 ~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~----~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
.+.+..-+...+....+....++.|+|-|+||.-+-.+|.. ........+.++++++-+|+...
T Consensus 116 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 116 AEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 22222223333333444666799999999999987766653 22111134689999998887754
No 178
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.55 E-value=0.017 Score=46.63 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=68.7
Q ss_pred ceEEEEeCCCCCC---ChhHHHHHHHHHHcCcEEEEeccCCC----CCCCCCchhhHHHHHHHHhhhhhhhcCCccccCC
Q 043492 13 YEVILFFPGTSVS---NTSYSKLFDHLASHGYIVVSPQLYNL----MPPKGNKEVDAAAEEINWLPKGLQSHLPENVVAD 85 (278)
Q Consensus 13 ~Pvvv~~hG~~~~---~~~~~~l~~~Las~Gy~Vv~~d~~~~----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d 85 (278)
.-.|||+-|++.- ...-..+.+.|-+.+|-.+.+..+.+ |...-..+.+++..+++.+.. .-.
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~----------~~f 105 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQL----------CGF 105 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhc----------cCc
Confidence 3567888888742 23457888999999999999886533 222334556667777765311 012
Q ss_pred CCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
...|.|+|||-|..-.+.+....... -++++.|+..|+...
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~----r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKD----RKIRAAILQAPVSDR 146 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccch----HHHHHHHHhCccchh
Confidence 34899999999999999888332110 157777777777644
No 179
>PLN02606 palmitoyl-protein thioesterase
Probab=96.47 E-value=0.039 Score=47.02 Aligned_cols=101 Identities=17% Similarity=0.158 Sum_probs=57.4
Q ss_pred CceEEEEeCCCC--CCChhHHHHHHHHHHc-CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCc
Q 043492 12 KYEVILFFPGTS--VSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNY 88 (278)
Q Consensus 12 ~~Pvvv~~hG~~--~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~ 88 (278)
+.| ||+.||.+ +....+..+.+.+... |.-+.++. .|.+.. ......+.+-++.+.+.+.. .+. + .+-
T Consensus 26 ~~P-vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~-~~~---L-~~G 96 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQ-MKE---L-SEG 96 (306)
T ss_pred CCC-EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhc-chh---h-cCc
Confidence 444 56679999 6666888888888533 66665555 222210 11111122222222222332 111 1 136
Q ss_pred eEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 89 SALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 89 i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
+-++|+|.||.+.=.++.+.+.. ..++.+|.+.
T Consensus 97 ~naIGfSQGglflRa~ierc~~~----p~V~nlISlg 129 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFCDNA----PPVINYVSLG 129 (306)
T ss_pred eEEEEEcchhHHHHHHHHHCCCC----CCcceEEEec
Confidence 89999999999998888876541 2577777655
No 180
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.38 E-value=0.053 Score=45.13 Aligned_cols=96 Identities=18% Similarity=0.149 Sum_probs=59.0
Q ss_pred EEEEeCCCCCCChh--HHHHHHHHHHc-CcEEEEeccCCCC--CCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 15 VILFFPGTSVSNTS--YSKLFDHLASH-GYIVVSPQLYNLM--PPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 15 vvv~~hG~~~~~~~--~~~l~~~Las~-Gy~Vv~~d~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
.+|+.||.+.+..+ +..+.+.+.++ |..|.++|. |.+ .+....-.+....+.+. +.. .+ --.+-+
T Consensus 25 P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l~pl~~Qv~~~ce~----v~~-m~----~lsqGy 94 (296)
T KOG2541|consen 25 PVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSLMPLWEQVDVACEK----VKQ-MP----ELSQGY 94 (296)
T ss_pred CEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhhccHHHHHHHHHHH----Hhc-ch----hccCce
Confidence 45677999977765 88888888887 999999995 222 11111111222222222 221 11 123578
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
.++|.|.||..+-.++..-+.. .++..|.+.
T Consensus 95 nivg~SQGglv~Raliq~cd~p-----pV~n~ISL~ 125 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNP-----PVKNFISLG 125 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCC-----CcceeEecc
Confidence 9999999999988888765442 455565543
No 181
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.36 E-value=0.22 Score=45.41 Aligned_cols=93 Identities=17% Similarity=0.180 Sum_probs=58.3
Q ss_pred CCCCceEEEEeC----CCC--CCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccc
Q 043492 9 NQGKYEVILFFP----GTS--VSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENV 82 (278)
Q Consensus 9 ~~~~~Pvvv~~h----G~~--~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 82 (278)
+..+.|+||+=+ |-| |... -+.+...|.. |.-|+.+.+.....++ ....|+..+...+.+.+....
T Consensus 65 d~~krP~vViDPRAGHGpGIGGFK~-dSevG~AL~~-GHPvYFV~F~p~P~pg--QTl~DV~~ae~~Fv~~V~~~h---- 136 (581)
T PF11339_consen 65 DPTKRPFVVIDPRAGHGPGIGGFKP-DSEVGVALRA-GHPVYFVGFFPEPEPG--QTLEDVMRAEAAFVEEVAERH---- 136 (581)
T ss_pred CCCCCCeEEeCCCCCCCCCccCCCc-ccHHHHHHHc-CCCeEEEEecCCCCCC--CcHHHHHHHHHHHHHHHHHhC----
Confidence 346789999853 333 3332 3455555554 8888887764332222 234555555444433344433
Q ss_pred cCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 83 VADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 83 ~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
.+..+..|+|.+.||..++.+|...|+
T Consensus 137 -p~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 137 -PDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred -CCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 234499999999999999999999886
No 182
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.15 E-value=0.017 Score=52.92 Aligned_cols=97 Identities=16% Similarity=0.133 Sum_probs=63.4
Q ss_pred EecCCCCCceEEEEeCCCC---CCChhHHHHHHHHHHc-CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCc
Q 043492 5 VFPDNQGKYEVILFFPGTS---VSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 5 ~~P~~~~~~Pvvv~~hG~~---~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 80 (278)
|.+......-+|+-+||+| .++.+...+.+.||.. |.-|+++|+.-.-........+....+..|+.++-.. +-
T Consensus 388 wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~al-lG- 465 (880)
T KOG4388|consen 388 WHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCAL-LG- 465 (880)
T ss_pred CCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHH-hC-
Confidence 3333333445899999999 3555666777777765 9999999974332223445566777778887543221 11
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHh
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~ 106 (278)
--.+||.++|-|.||.+.+-.+.
T Consensus 466 ---~TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 466 ---STGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred ---cccceEEEeccCCCcceeehhHH
Confidence 13469999999999987665554
No 183
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.13 E-value=0.1 Score=44.09 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=72.6
Q ss_pred CCceEEEEeCCCCCCChh-HHH-----HHHHHHHcCcEEEEeccCCCC--CCCCCch--hhHHHHHHHHhhhhhhhcCCc
Q 043492 11 GKYEVILFFPGTSVSNTS-YSK-----LFDHLASHGYIVVSPQLYNLM--PPKGNKE--VDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~-~~~-----l~~~Las~Gy~Vv~~d~~~~~--~~~~~~~--~~~~~~~~~~l~~~l~~~~~~ 80 (278)
+++|++|=.|..+-+..+ +.. -+..+..+ |.|+-+|-+|+- .+....+ ...+..+.+. +..+++.
T Consensus 44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~----l~~VL~~ 118 (326)
T KOG2931|consen 44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADM----LPEVLDH 118 (326)
T ss_pred CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHH----HHHHHHh
Confidence 368899999999977654 333 35667778 999999999873 2221111 2223333333 2223322
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
+....|.-+|--.|+++-..+|.++|+ ++-++|++++..
T Consensus 119 ---f~lk~vIg~GvGAGAyIL~rFAl~hp~------rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 119 ---FGLKSVIGMGVGAGAYILARFALNHPE------RVLGLVLINCDP 157 (326)
T ss_pred ---cCcceEEEecccccHHHHHHHHhcChh------heeEEEEEecCC
Confidence 567789999999999999999999998 899999988755
No 184
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.13 E-value=0.04 Score=44.27 Aligned_cols=103 Identities=16% Similarity=0.193 Sum_probs=60.9
Q ss_pred CCceEEEEeCCCCCCCh----------------hHHHHHHHHHHcCcEEEEeccCCCC-----CCCC----CchhhHHHH
Q 043492 11 GKYEVILFFPGTSVSNT----------------SYSKLFDHLASHGYIVVSPQLYNLM-----PPKG----NKEVDAAAE 65 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~----------------~~~~l~~~Las~Gy~Vv~~d~~~~~-----~~~~----~~~~~~~~~ 65 (278)
.+..++|++||.|.-+. .--.+.++-...||-|++.+.-... ..+. ...+..+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 35569999999984321 1223456667789999998853211 0010 011111111
Q ss_pred HHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcC
Q 043492 66 EINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPV 127 (278)
Q Consensus 66 ~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~ 127 (278)
+...+ ++ ......+.++.||+||...+.+..+.+... ++.++.+.+..
T Consensus 179 vw~~~------v~----pa~~~sv~vvahsyGG~~t~~l~~~f~~d~----~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNI------VL----PAKAESVFVVAHSYGGSLTLDLVERFPDDE----SVFAIALTDSA 226 (297)
T ss_pred HHHHH------hc----ccCcceEEEEEeccCChhHHHHHHhcCCcc----ceEEEEeeccc
Confidence 11111 11 135679999999999999999998877532 56666665543
No 185
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.08 E-value=0.0077 Score=45.36 Aligned_cols=23 Identities=30% Similarity=0.234 Sum_probs=20.2
Q ss_pred CCceEEEEeChhHHHHHHHHhhC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
..+|.+.|||+||.+|..++...
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhh
Confidence 47999999999999999988753
No 186
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.08 E-value=0.081 Score=45.23 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=57.5
Q ss_pred CceEEEEeCCCCCCC--hhHHHHHHHHHHc-CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCc
Q 043492 12 KYEVILFFPGTSVSN--TSYSKLFDHLASH-GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNY 88 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~--~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~ 88 (278)
+.| +|+.||.|.+. .....+.+.+... |.-|.++..-.. ........+.+-++.+.+.+.. .+. + .+-
T Consensus 25 ~~P-~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~~---~~~s~~~~~~~Qve~vce~l~~-~~~---l-~~G 95 (314)
T PLN02633 25 SVP-FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGNG---VGDSWLMPLTQQAEIACEKVKQ-MKE---L-SQG 95 (314)
T ss_pred CCC-eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECCC---ccccceeCHHHHHHHHHHHHhh-chh---h-hCc
Confidence 344 56679999544 3677777777664 667777664222 1111222222222222222332 111 1 136
Q ss_pred eEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 89 SALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 89 i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
+.++|||.||.++=.+..+-+.. ..++.+|.+.
T Consensus 96 ~naIGfSQGGlflRa~ierc~~~----p~V~nlISlg 128 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFCDGG----PPVYNYISLA 128 (314)
T ss_pred EEEEEEccchHHHHHHHHHCCCC----CCcceEEEec
Confidence 89999999999998888876641 2577777765
No 187
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.97 E-value=0.035 Score=46.82 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=47.8
Q ss_pred eEEEEeCCCCCC---ChhHHHHHHHHHHc--CcEEEEeccCCCCCCC-CCchhhHHHHHHHHhhhhhhhcCCccccCCCC
Q 043492 14 EVILFFPGTSVS---NTSYSKLFDHLASH--GYIVVSPQLYNLMPPK-GNKEVDAAAEEINWLPKGLQSHLPENVVADLN 87 (278)
Q Consensus 14 Pvvv~~hG~~~~---~~~~~~l~~~Las~--Gy~Vv~~d~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~ 87 (278)
..||+.||+|.+ +..+..+.+.+.+. |--|.+++.......+ .......+.+-++.+.+.+... ..+. +
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~----p~L~-~ 80 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLAND----PELA-N 80 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-----GGGT-T
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhC----hhhh-c
Confidence 356777999964 34566666655554 7778887742210000 0000111222222222222221 1111 4
Q ss_pred ceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc
Q 043492 88 YSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
-+.++|+|.||.+.=.++.+.+. ..++.+|.+..
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~-----~~V~nlISlgg 114 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCND-----PPVHNLISLGG 114 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TS-----S-EEEEEEES-
T ss_pred ceeeeeeccccHHHHHHHHHCCC-----CCceeEEEecC
Confidence 78999999999999988888764 26888887663
No 188
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.75 E-value=0.018 Score=44.26 Aligned_cols=42 Identities=17% Similarity=0.033 Sum_probs=28.8
Q ss_pred CCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
...+|.+.|||+||.+|..++....... ..+...++.+++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~--~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG--LGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc--CCCceEEEEeCCCc
Confidence 4579999999999999999988754310 01344566666543
No 189
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.54 E-value=0.033 Score=49.94 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHcCcE----EE--EeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHH
Q 043492 28 SYSKLFDHLASHGYI----VV--SPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTA 101 (278)
Q Consensus 28 ~~~~l~~~Las~Gy~----Vv--~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a 101 (278)
.|..+.+.|+..||. ++ .+|+|-+- . ......+.+..|++.++..... -+..+|.|++|||||...
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~-~----~~e~rd~yl~kLK~~iE~~~~~---~G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSY-H----NSEERDQYLSKLKKKIETMYKL---NGGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhcc-C----ChhHHHHHHHHHHHHHHHHHHH---cCCCceEEEecCCccHHH
Confidence 678889999999998 33 35554321 1 1222333333333333332221 123799999999999999
Q ss_pred HHHHhhCCC
Q 043492 102 FALAQGYAT 110 (278)
Q Consensus 102 ~~~a~~~~~ 110 (278)
+.+....+.
T Consensus 197 lyFl~w~~~ 205 (473)
T KOG2369|consen 197 LYFLKWVEA 205 (473)
T ss_pred HHHHhcccc
Confidence 999987665
No 190
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.37 E-value=0.049 Score=44.79 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=27.3
Q ss_pred ceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc
Q 043492 88 YSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP 126 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p 126 (278)
++.+.|||.||.+|..++...... ..-+|..++.+++
T Consensus 85 ~i~v~GHSkGGnLA~yaa~~~~~~--~~~rI~~vy~fDg 121 (224)
T PF11187_consen 85 KIYVTGHSKGGNLAQYAAANCDDE--IQDRISKVYSFDG 121 (224)
T ss_pred CEEEEEechhhHHHHHHHHHccHH--HhhheeEEEEeeC
Confidence 699999999999999998873210 0116778887764
No 191
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.32 E-value=0.02 Score=52.93 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHcCcEEEEeccCCCCCCCC--CchhhHHHHHHHHhhhhhhhcCCccccCC-CCceEEEEeChhHHHHHHH
Q 043492 28 SYSKLFDHLASHGYIVVSPQLYNLMPPKG--NKEVDAAAEEINWLPKGLQSHLPENVVAD-LNYSALMGHSRGGLTAFAL 104 (278)
Q Consensus 28 ~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~d-~~~i~l~GhS~GG~~a~~~ 104 (278)
.|..+.+.|++.||. .-+..+..+.-. ....+.-......|.+.++. ....+ -.+|.|+||||||.+++.+
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~----ay~~nggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIEL----MVATNGGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHH----HHHHcCCCeEEEEEeCCchHHHHHH
Confidence 457999999999997 344433221110 00011011111111111111 11223 4699999999999999988
Q ss_pred Hh
Q 043492 105 AQ 106 (278)
Q Consensus 105 a~ 106 (278)
..
T Consensus 231 L~ 232 (642)
T PLN02517 231 MK 232 (642)
T ss_pred HH
Confidence 76
No 192
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=95.15 E-value=0.048 Score=49.10 Aligned_cols=100 Identities=18% Similarity=0.194 Sum_probs=64.6
Q ss_pred EEEec-CCCCCceEEEEeCCCC---CCChhHHHHHHHHHHcC-cEEEEeccC-CC-C------CCC--CCchhhHHHHHH
Q 043492 3 FIVFP-DNQGKYEVILFFPGTS---VSNTSYSKLFDHLASHG-YIVVSPQLY-NL-M------PPK--GNKEVDAAAEEI 67 (278)
Q Consensus 3 ~i~~P-~~~~~~Pvvv~~hG~~---~~~~~~~~l~~~Las~G-y~Vv~~d~~-~~-~------~~~--~~~~~~~~~~~~ 67 (278)
-||.| .+..+.-|+||+-|+| |+++.--+=++.||..+ .+|+.++++ |. | .+. +.....|-.-++
T Consensus 124 NVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl 203 (601)
T KOG4389|consen 124 NVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLAL 203 (601)
T ss_pred EEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHH
Confidence 47888 3444555899999988 55554444467787765 445557764 11 1 111 223455666678
Q ss_pred HHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhh
Q 043492 68 NWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 68 ~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
.|+.+++... .-|+++|.|+|.|.|+.-+..-...
T Consensus 204 ~WV~~Ni~aF-----GGnp~~vTLFGESAGaASv~aHLls 238 (601)
T KOG4389|consen 204 QWVQENIAAF-----GGNPSRVTLFGESAGAASVVAHLLS 238 (601)
T ss_pred HHHHHhHHHh-----CCCcceEEEeccccchhhhhheecC
Confidence 8987776653 2489999999999999866655544
No 193
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.14 E-value=0.1 Score=42.93 Aligned_cols=24 Identities=33% Similarity=0.238 Sum_probs=20.3
Q ss_pred CCCceEEEEeChhHHHHHHHHhhC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
...+|.+.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 346899999999999999988753
No 194
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.80 E-value=0.11 Score=45.31 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=63.9
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHc---------CcEEEEeccCCCCCCCCCchh----hHHHHHHHHhhhhhhhcCC
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASH---------GYIVVSPQLYNLMPPKGNKEV----DAAAEEINWLPKGLQSHLP 79 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~---------Gy~Vv~~d~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~ 79 (278)
--.++++|||.|+-..+..+...|... =|.||+|..+|.+.++..... .....++.-|
T Consensus 152 v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkL--------- 222 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKL--------- 222 (469)
T ss_pred ccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHH---------
Confidence 345788999999988877777777654 388999999998877643221 1112222211
Q ss_pred ccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 80 ENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 80 ~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
-.+++.++..|=|--+|..++..+|.-+|+
T Consensus 223 -MlRLg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 223 -MLRLGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred -HHHhCcceeEeecCchHHHHHHHHHhhcch
Confidence 123678899999999999999999999997
No 195
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.70 E-value=0.12 Score=47.00 Aligned_cols=119 Identities=12% Similarity=-0.004 Sum_probs=63.0
Q ss_pred CCCceEEEEeCCCCCCChhHHH---HHHH--------------------HHHcCcEEEEecc-CCCCCCCCC---chhhH
Q 043492 10 QGKYEVILFFPGTSVSNTSYSK---LFDH--------------------LASHGYIVVSPQL-YNLMPPKGN---KEVDA 62 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~~~---l~~~--------------------Las~Gy~Vv~~d~-~~~~~~~~~---~~~~~ 62 (278)
....|+|+|+.|+.|.++.... +... +.+. ..++-+|. .|.|.+... ....+
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGtGfSy~~~~~~~~~d 141 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQPVGSGFSYSKTPIDKTGD 141 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCCCCCCccCCCCCCCccCC
Confidence 3467999999999876653211 1110 1111 45666674 344443211 11111
Q ss_pred HHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCC----CCCCCcccceEEecCcCCCC
Q 043492 63 AAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYAT----NPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~----~~~~~~~~~a~v~~~p~~~~ 130 (278)
...+ +.+.+-+...+....++...++.|+|.|+||.-+-.+|..--+ .....+.+++++.-+|+...
T Consensus 142 ~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 142 ISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred HHHH-HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCc
Confidence 1211 1111112222222333455689999999999877766654211 11234678899988877644
No 196
>PLN02209 serine carboxypeptidase
Probab=94.41 E-value=0.17 Score=45.91 Aligned_cols=116 Identities=13% Similarity=0.101 Sum_probs=63.5
Q ss_pred CCCceEEEEeCCCCCCChhHHHHHHH-----------------------HHHcCcEEEEecc-CCCCCCCCC------ch
Q 043492 10 QGKYEVILFFPGTSVSNTSYSKLFDH-----------------------LASHGYIVVSPQL-YNLMPPKGN------KE 59 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~~~l~~~-----------------------Las~Gy~Vv~~d~-~~~~~~~~~------~~ 59 (278)
....|+|+|+.|+.|.+..+..+.+. +.+. ..++-+|. .|.|.+... .+
T Consensus 65 ~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGtGfSy~~~~~~~~~~ 143 (437)
T PLN02209 65 PQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQPVGSGFSYSKTPIERTSD 143 (437)
T ss_pred CCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecCCCCCCccCCCCCCCccCC
Confidence 34679999999998876543222110 1111 34555564 344433211 11
Q ss_pred hhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCC----CCCCCcccceEEecCcCCCC
Q 043492 60 VDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYAT----NPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 60 ~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~----~~~~~~~~~a~v~~~p~~~~ 130 (278)
..++.++... +...+....+....++.|+|.|+||.-+-.+|..--+ .....+.+++++..+|+...
T Consensus 144 ~~~a~~~~~f----l~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 144 TSEVKKIHEF----LQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHH----HHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 1223333333 2223322333455689999999999877766653211 12234688999988887654
No 197
>PLN02454 triacylglycerol lipase
Probab=94.37 E-value=0.052 Score=48.36 Aligned_cols=20 Identities=35% Similarity=0.232 Sum_probs=18.3
Q ss_pred ceEEEEeChhHHHHHHHHhh
Q 043492 88 YSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~ 107 (278)
+|.+.|||+||++|+.+|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 59999999999999999865
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=94.27 E-value=1.1 Score=35.38 Aligned_cols=23 Identities=26% Similarity=0.147 Sum_probs=20.3
Q ss_pred CCCceEEEEeChhHHHHHHHHhh
Q 043492 85 DLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
...++.++|||+|..++-.++..
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhh
Confidence 45699999999999999988877
No 199
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.17 E-value=0.16 Score=40.24 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=26.8
Q ss_pred CCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
-.++.|+|+|+|+.++..++...+......-+|.+++++.
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfG 119 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFG 119 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES
T ss_pred CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEec
Confidence 3599999999999999999877221111112566766643
No 200
>PLN02324 triacylglycerol lipase
Probab=93.79 E-value=0.067 Score=47.68 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=18.4
Q ss_pred ceEEEEeChhHHHHHHHHhh
Q 043492 88 YSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~ 107 (278)
+|.+.|||+||++|+.+|..
T Consensus 216 sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 79999999999999999864
No 201
>PLN02310 triacylglycerol lipase
Probab=93.75 E-value=0.066 Score=47.62 Aligned_cols=21 Identities=33% Similarity=0.303 Sum_probs=18.7
Q ss_pred CceEEEEeChhHHHHHHHHhh
Q 043492 87 NYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~ 107 (278)
-+|.+.|||+||++|+.+|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999998864
No 202
>PLN02571 triacylglycerol lipase
Probab=93.67 E-value=0.077 Score=47.34 Aligned_cols=20 Identities=30% Similarity=0.218 Sum_probs=18.4
Q ss_pred ceEEEEeChhHHHHHHHHhh
Q 043492 88 YSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~ 107 (278)
+|.+.|||+||.+|+.+|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 79999999999999998875
No 203
>PLN02408 phospholipase A1
Probab=93.58 E-value=0.08 Score=46.54 Aligned_cols=22 Identities=27% Similarity=0.205 Sum_probs=19.4
Q ss_pred ceEEEEeChhHHHHHHHHhhCC
Q 043492 88 YSALMGHSRGGLTAFALAQGYA 109 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~~~~ 109 (278)
+|.+.|||+||.+|..+|....
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHH
Confidence 6999999999999999987643
No 204
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.55 E-value=0.56 Score=38.62 Aligned_cols=82 Identities=18% Similarity=0.183 Sum_probs=46.8
Q ss_pred CcEEEEeccCCCCCCC----CCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCC-
Q 043492 40 GYIVVSPQLYNLMPPK----GNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPL- 114 (278)
Q Consensus 40 Gy~Vv~~d~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~- 114 (278)
||.+..++++.+-.+- .........+-.+.|.+.+....+ ..+++.|+|+|+|+.++..++.+.......
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~ 76 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP 76 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC
Confidence 6788888887753331 111222333334444333433222 567899999999999999888765332111
Q ss_pred CcccceEEecCc
Q 043492 115 GLKFSALVGVDP 126 (278)
Q Consensus 115 ~~~~~a~v~~~p 126 (278)
.-.++.++.-+|
T Consensus 77 ~~~l~fVl~gnP 88 (225)
T PF08237_consen 77 PDDLSFVLIGNP 88 (225)
T ss_pred cCceEEEEecCC
Confidence 124555555555
No 205
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=93.07 E-value=0.16 Score=36.18 Aligned_cols=44 Identities=18% Similarity=0.180 Sum_probs=33.1
Q ss_pred CCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcccc
Q 043492 149 FSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDV 202 (278)
Q Consensus 149 ~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f 202 (278)
...|+|+++++. |+.+|.. ......+.+.+ . .++.++|.||..+
T Consensus 33 ~~~piL~l~~~~-------Dp~TP~~-~a~~~~~~l~~-s-~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 33 GAPPILVLGGTH-------DPVTPYE-GARAMAARLPG-S-RLVTVDGAGHGVY 76 (103)
T ss_pred CCCCEEEEecCc-------CCCCcHH-HHHHHHHHCCC-c-eEEEEeccCccee
Confidence 358999999999 8899873 23334455554 4 7999999999976
No 206
>PLN02162 triacylglycerol lipase
Probab=92.70 E-value=0.13 Score=46.53 Aligned_cols=21 Identities=33% Similarity=0.270 Sum_probs=18.4
Q ss_pred CCceEEEEeChhHHHHHHHHh
Q 043492 86 LNYSALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~ 106 (278)
..++.+.|||+||++|..++.
T Consensus 277 ~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CceEEEEecChHHHHHHHHHH
Confidence 458999999999999998765
No 207
>PLN00413 triacylglycerol lipase
Probab=92.61 E-value=0.098 Score=47.32 Aligned_cols=21 Identities=33% Similarity=0.389 Sum_probs=18.8
Q ss_pred CCceEEEEeChhHHHHHHHHh
Q 043492 86 LNYSALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~ 106 (278)
..++.+.|||+||++|..++.
T Consensus 283 ~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHH
Confidence 458999999999999999885
No 208
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.54 E-value=0.13 Score=47.04 Aligned_cols=21 Identities=33% Similarity=0.319 Sum_probs=18.8
Q ss_pred CceEEEEeChhHHHHHHHHhh
Q 043492 87 NYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~ 107 (278)
-+|.+.|||+||++|+.+|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999998864
No 209
>PLN02802 triacylglycerol lipase
Probab=92.23 E-value=0.14 Score=46.64 Aligned_cols=22 Identities=27% Similarity=0.301 Sum_probs=19.2
Q ss_pred CceEEEEeChhHHHHHHHHhhC
Q 043492 87 NYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
-+|.+.|||+||.+|..+|...
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHH
Confidence 3799999999999999988754
No 210
>PLN02761 lipase class 3 family protein
Probab=92.22 E-value=0.15 Score=46.57 Aligned_cols=21 Identities=29% Similarity=0.237 Sum_probs=18.8
Q ss_pred CceEEEEeChhHHHHHHHHhh
Q 043492 87 NYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~ 107 (278)
-+|.+.|||+||++|..+|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 489999999999999998864
No 211
>PLN02719 triacylglycerol lipase
Probab=92.18 E-value=0.15 Score=46.48 Aligned_cols=22 Identities=32% Similarity=0.264 Sum_probs=19.3
Q ss_pred CceEEEEeChhHHHHHHHHhhC
Q 043492 87 NYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
-+|.+.|||+||.+|+.+|...
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHH
Confidence 4899999999999999988643
No 212
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.11 E-value=0.19 Score=44.39 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=43.4
Q ss_pred CceEEEEeCCCCC-CChhHHHHHHHHHHc--CcEEEEeccCCCCCCCCCchhhH-HHHHHHHhhhhhhhcCCccccCCCC
Q 043492 12 KYEVILFFPGTSV-SNTSYSKLFDHLASH--GYIVVSPQLYNLMPPKGNKEVDA-AAEEINWLPKGLQSHLPENVVADLN 87 (278)
Q Consensus 12 ~~Pvvv~~hG~~~-~~~~~~~l~~~Las~--Gy~Vv~~d~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~d~~ 87 (278)
+.=+||+.||..+ +...+...++..++. ++.++.-...+..... ...+.. -.++.+++.+.+. ....+
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T-~~Gv~~lG~Rla~~~~e~~~-------~~si~ 150 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQT-FDGVDVLGERLAEEVKETLY-------DYSIE 150 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhc-cccceeeecccHHHHhhhhh-------ccccc
Confidence 3348999999998 445556666666654 4433332222221111 000000 0111122111010 01257
Q ss_pred ceEEEEeChhHHHHHHHHh
Q 043492 88 YSALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a~ 106 (278)
+|-.+|||+||.++-.+.+
T Consensus 151 kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeeeeecCCeeeeEEEE
Confidence 9999999999987665543
No 213
>PLN02934 triacylglycerol lipase
Probab=92.04 E-value=0.14 Score=46.66 Aligned_cols=22 Identities=27% Similarity=0.268 Sum_probs=19.0
Q ss_pred CCceEEEEeChhHHHHHHHHhh
Q 043492 86 LNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
..++.+.|||+||++|..++..
T Consensus 320 ~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 320 NAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred CCeEEEeccccHHHHHHHHHHH
Confidence 3589999999999999998753
No 214
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=91.98 E-value=0.51 Score=41.89 Aligned_cols=89 Identities=19% Similarity=0.242 Sum_probs=52.0
Q ss_pred eEEEEeCCCCCCChhHH---HHHHHHH-HcCcEEEEeccCCCCCCC--CC---------------chhhHHHHHHHHhhh
Q 043492 14 EVILFFPGTSVSNTSYS---KLFDHLA-SHGYIVVSPQLYNLMPPK--GN---------------KEVDAAAEEINWLPK 72 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~---~l~~~La-s~Gy~Vv~~d~~~~~~~~--~~---------------~~~~~~~~~~~~l~~ 72 (278)
..|+|.-|.-|+-+.+. -++-.+| +.+-.+|-++|+.-|.+. +. ....|...++..|++
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 35666667666544321 1222233 346788889997654321 10 112233333333322
Q ss_pred hhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 73 GLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 73 ~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
+ .......|+++|-|+||++|.++-.++|.
T Consensus 161 ~--------~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 161 D--------LSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred c--------cccccCcEEEecCchhhHHHHHHHhcChh
Confidence 2 12345689999999999999999999996
No 215
>PLN02753 triacylglycerol lipase
Probab=90.88 E-value=0.17 Score=46.32 Aligned_cols=21 Identities=33% Similarity=0.308 Sum_probs=19.0
Q ss_pred CceEEEEeChhHHHHHHHHhh
Q 043492 87 NYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~ 107 (278)
-+|.+.|||+||++|+.+|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 489999999999999999864
No 216
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=90.61 E-value=0.59 Score=37.78 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=20.3
Q ss_pred CCceEEEEeChhHHHHHHHHhhC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
-..++|+|||+|+.+...+..+.
T Consensus 94 GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 94 GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCCEEEEEeChHHHHHHHHHHHH
Confidence 35899999999999999998764
No 217
>PLN02847 triacylglycerol lipase
Probab=90.47 E-value=0.19 Score=46.69 Aligned_cols=21 Identities=38% Similarity=0.290 Sum_probs=18.7
Q ss_pred CceEEEEeChhHHHHHHHHhh
Q 043492 87 NYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~ 107 (278)
-++.+.|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999988764
No 218
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=89.77 E-value=0.77 Score=42.28 Aligned_cols=88 Identities=16% Similarity=0.219 Sum_probs=56.2
Q ss_pred HHHHHcCcEEEEeccCCCCCCC---CCchhhHHHHHHHHhhhh-------hhhcCCccccCCCCceEEEEeChhHHHHHH
Q 043492 34 DHLASHGYIVVSPQLYNLMPPK---GNKEVDAAAEEINWLPKG-------LQSHLPENVVADLNYSALMGHSRGGLTAFA 103 (278)
Q Consensus 34 ~~Las~Gy~Vv~~d~~~~~~~~---~~~~~~~~~~~~~~l~~~-------l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~ 103 (278)
..-.++||++++-|. |+.... ......+.+.+.+|-.+. -+.++...+.-.+++-...|.|.||.-++.
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 445678999999994 332211 111112333333332111 122222334456788999999999999999
Q ss_pred HHhhCCCCCCCCcccceEEecCcCC
Q 043492 104 LAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 104 ~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
.|.++|+ .+.+|++-+|..
T Consensus 132 ~AQryP~------dfDGIlAgaPA~ 150 (474)
T PF07519_consen 132 AAQRYPE------DFDGILAGAPAI 150 (474)
T ss_pred HHHhChh------hcCeEEeCCchH
Confidence 9999998 788898888866
No 219
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.14 E-value=2.3 Score=33.27 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=30.2
Q ss_pred CceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCCC
Q 043492 87 NYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVAG 129 (278)
Q Consensus 87 ~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~ 129 (278)
.+..+-|-||||..|.++..+.|. -+..+|+++.+..
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~------lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPH------LFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChh------Hhhhheeecceee
Confidence 357888999999999999999997 4667777776653
No 220
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=87.75 E-value=0.38 Score=42.19 Aligned_cols=23 Identities=30% Similarity=0.160 Sum_probs=20.0
Q ss_pred CCceEEEEeChhHHHHHHHHhhC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
.-+|.+.|||+||.+|..+|..-
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHHH
Confidence 45899999999999999998753
No 221
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=87.39 E-value=20 Score=31.81 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=62.5
Q ss_pred cCCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCc-CC-------------CCCCCC-----------CCC
Q 043492 83 VADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDP-VA-------------GIPYFH-----------SEL 137 (278)
Q Consensus 83 ~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p-~~-------------~~~~~~-----------~~~ 137 (278)
.+...+..|-|-|--|.++...|..+++ +.+++.+.- .. |.++.. ..+
T Consensus 230 q~~Ik~F~VTGaSKRgWttwLTAIaDpr-------v~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl 302 (507)
T COG4287 230 QVEIKGFMVTGASKRGWTTWLTAIADPR-------VFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERL 302 (507)
T ss_pred heeeeeEEEeccccchHHHHHHHhcCcc-------hhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhh
Confidence 3677899999999999999999999986 333321100 00 000000 000
Q ss_pred CCCc----------cccC----ccCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCcc
Q 043492 138 DPPI----------LDYE----SFNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHM 200 (278)
Q Consensus 138 ~~~~----------~~~~----~~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 200 (278)
..+. +.|. ...+.+|-.|+.++.| |.++|.. ..-+|+.+++.+ .+..+|+..|.
T Consensus 303 ~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgD------dff~pDs--a~lYyd~LPG~k-aLrmvPN~~H~ 370 (507)
T COG4287 303 ETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGD------DFFVPDS--ANLYYDDLPGEK-ALRMVPNDPHN 370 (507)
T ss_pred cCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCC------cccCCCc--cceeeccCCCce-eeeeCCCCcch
Confidence 0000 0000 0357789999988885 6677752 333567777766 89999999998
No 222
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=86.20 E-value=0.78 Score=29.48 Aligned_cols=21 Identities=19% Similarity=0.222 Sum_probs=11.8
Q ss_pred CCCCceEEEEeCCCCCCChhH
Q 043492 9 NQGKYEVILFFPGTSVSNTSY 29 (278)
Q Consensus 9 ~~~~~Pvvv~~hG~~~~~~~~ 29 (278)
..+++|+|++.||+.+++..|
T Consensus 39 ~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 39 QNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TTTT--EEEEE--TT--GGGG
T ss_pred cCCCCCcEEEECCcccChHHH
Confidence 345789999999999988765
No 223
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=85.42 E-value=8.6 Score=35.22 Aligned_cols=101 Identities=11% Similarity=0.069 Sum_probs=60.7
Q ss_pred CCCceEEEEeCCCCCCChhH-----HHHHHHHHHcCcEEEEeccCCCCCCC--CCc-----hhhHHHHHHHHhhhhhhhc
Q 043492 10 QGKYEVILFFPGTSVSNTSY-----SKLFDHLASHGYIVVSPQLYNLMPPK--GNK-----EVDAAAEEINWLPKGLQSH 77 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~-----~~l~~~Las~Gy~Vv~~d~~~~~~~~--~~~-----~~~~~~~~~~~l~~~l~~~ 77 (278)
+...|+.+++-|=+.-...| ..+...-.++|-.|+.++||-.|.+. ... ......+++..+..-+..+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 34678889998877433222 34555566779999999997655221 111 1112223333322212221
Q ss_pred CCccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 78 LPENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 78 ~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
-.+...-+..+++.+|-|+-|.+++++-..+|+
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe 195 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE 195 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCch
Confidence 111122344699999999999999999999997
No 224
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=85.00 E-value=3.8 Score=33.36 Aligned_cols=65 Identities=28% Similarity=0.354 Sum_probs=42.1
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEE-EEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEE
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIV-VSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALM 92 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~V-v~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~ 92 (278)
-+|||..|||........+. ...+|.| ++.|++..... . + + -..++|.|+
T Consensus 12 ~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~d--------~----~-~-------------~~y~~i~lv 62 (213)
T PF04301_consen 12 ELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDFD--------F----D-L-------------SGYREIYLV 62 (213)
T ss_pred eEEEEEecCCCChHHhhhcc---CCCCccEEEEecCcccccc--------c----c-c-------------ccCceEEEE
Confidence 59999999999887665542 1234444 44666543210 0 0 0 124589999
Q ss_pred EeChhHHHHHHHHhh
Q 043492 93 GHSRGGLTAFALAQG 107 (278)
Q Consensus 93 GhS~GG~~a~~~a~~ 107 (278)
+.|||=.+|..+...
T Consensus 63 AWSmGVw~A~~~l~~ 77 (213)
T PF04301_consen 63 AWSMGVWAANRVLQG 77 (213)
T ss_pred EEeHHHHHHHHHhcc
Confidence 999999988777643
No 225
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=83.66 E-value=2.2 Score=39.04 Aligned_cols=95 Identities=13% Similarity=0.037 Sum_probs=50.9
Q ss_pred CCCCCceEEEEeCCCCCCChhHHHHHHH-------------------HHHcCcEEEEecc-CCCCCCCC--C-------c
Q 043492 8 DNQGKYEVILFFPGTSVSNTSYSKLFDH-------------------LASHGYIVVSPQL-YNLMPPKG--N-------K 58 (278)
Q Consensus 8 ~~~~~~Pvvv~~hG~~~~~~~~~~l~~~-------------------Las~Gy~Vv~~d~-~~~~~~~~--~-------~ 58 (278)
....+.|+|+|+.|+.|.++.+-.+.+. |-++ -.++-+|+ -|.|.+.. . .
T Consensus 96 ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~ 174 (498)
T COG2939 96 NDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEG 174 (498)
T ss_pred CCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhc
Confidence 3455799999999999988766555331 1111 12333442 23333321 1 1
Q ss_pred hhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhC
Q 043492 59 EVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 59 ~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
.-.|+..+.+.+-+.+.. ..+ ..++..|+|-|+||.-+..+|...
T Consensus 175 ~~~D~~~~~~~f~~~fp~----~~r-~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPH----YAR-LLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred cchhHHHHHHHHHHHHHH----Hhh-hcCceeEeeccccchhhHHHHHHH
Confidence 112333322222111111 111 236889999999999988888754
No 226
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=83.54 E-value=1.3 Score=37.48 Aligned_cols=25 Identities=32% Similarity=0.279 Sum_probs=20.9
Q ss_pred CCCceEEEEeChhHHHHHHHHhhCC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGYA 109 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~~ 109 (278)
-..+|.|-|||+||.+|..+.....
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 3458999999999999998887654
No 227
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=83.54 E-value=1.3 Score=37.48 Aligned_cols=25 Identities=32% Similarity=0.279 Sum_probs=20.9
Q ss_pred CCCceEEEEeChhHHHHHHHHhhCC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGYA 109 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~~ 109 (278)
-..+|.|-|||+||.+|..+.....
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 3458999999999999998887654
No 228
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.49 E-value=3.2 Score=34.83 Aligned_cols=100 Identities=10% Similarity=-0.050 Sum_probs=56.3
Q ss_pred CCceEEEEeCCCCCCChhH-HHHHHHHHHcCcEEEEeccCCCCCCCCCc-hhhHHHHHHHH------hhhhhhhcCCccc
Q 043492 11 GKYEVILFFPGTSVSNTSY-SKLFDHLASHGYIVVSPQLYNLMPPKGNK-EVDAAAEEINW------LPKGLQSHLPENV 82 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~-~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-~~~~~~~~~~~------l~~~l~~~~~~~~ 82 (278)
+..|+-++..|.|.....- .-+..-+..+|...+.++-+..+...... ....++.+-|. +.+..+.++....
T Consensus 111 K~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 111 KMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred CcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 4557777777766543322 25677788888888888864433211111 11111111111 1112223333233
Q ss_pred cCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 83 VADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 83 ~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
.....+.+++|-||||.+|-.+....++
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~ 218 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQK 218 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCC
Confidence 3567899999999999999998875554
No 229
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=80.76 E-value=7.9 Score=28.68 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=24.6
Q ss_pred CCCceEEEEeCCCCCCChhH--HHHHHHHHHcC
Q 043492 10 QGKYEVILFFPGTSVSNTSY--SKLFDHLASHG 40 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~~--~~l~~~Las~G 40 (278)
..++|+|+-+||+.|...+| +-+|+.|-..|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 35789999999999999876 45677766665
No 230
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=80.67 E-value=2.7 Score=33.63 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=32.0
Q ss_pred cCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCCC
Q 043492 147 FNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLDD 205 (278)
Q Consensus 147 ~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d~ 205 (278)
.++++|+|+++|++ |...|... ........+. ...+.++++++|+.+.+.
T Consensus 218 ~~~~~P~l~i~g~~-------d~~~~~~~-~~~~~~~~~~-~~~~~~~~~~gH~~~~~~ 267 (282)
T COG0596 218 ARITVPTLIIHGED-------DPVVPAEL-ARRLAAALPN-DARLVVIPGAGHFPHLEA 267 (282)
T ss_pred ccCCCCeEEEecCC-------CCcCCHHH-HHHHHhhCCC-CceEEEeCCCCCcchhhc
Confidence 45789999999999 64444321 1222233333 237899999999966544
No 231
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=80.55 E-value=7.3 Score=35.60 Aligned_cols=47 Identities=17% Similarity=0.016 Sum_probs=31.8
Q ss_pred CCCCceEEEEeChhHHHHHHHHhh----CCCCCCCCcccceEEecCcCCCC
Q 043492 84 ADLNYSALMGHSRGGLTAFALAQG----YATNPPLGLKFSALVGVDPVAGI 130 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~a~~~a~~----~~~~~~~~~~~~a~v~~~p~~~~ 130 (278)
.--+.+.|.|-|++|+-+-.+|.. +...+..-+.+|+++.=.|+...
T Consensus 165 y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 165 YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred hcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCc
Confidence 456689999999999776666653 22112334678888876666644
No 232
>PF03283 PAE: Pectinacetylesterase
Probab=80.43 E-value=11 Score=33.56 Aligned_cols=38 Identities=24% Similarity=0.179 Sum_probs=26.8
Q ss_pred HHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhh
Q 043492 62 AAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 62 ~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
.+..+++||... +.-+.++|.|.|.|.||..++..+..
T Consensus 139 i~~avl~~l~~~--------gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 139 ILRAVLDDLLSN--------GLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHh--------cCcccceEEEeccChHHHHHHHHHHH
Confidence 345566665332 22356799999999999999987654
No 233
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=79.36 E-value=4.9 Score=31.73 Aligned_cols=38 Identities=29% Similarity=0.376 Sum_probs=32.0
Q ss_pred CCceEEEEeCCCCCCChh--HHHHHHHHHHcCcEEEEecc
Q 043492 11 GKYEVILFFPGTSVSNTS--YSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~--~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+..|.+||+.|+.|+..+ -..+.+.|..+||.|...|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 466899999999998764 35677889999999999994
No 234
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=79.00 E-value=8.9 Score=33.34 Aligned_cols=88 Identities=15% Similarity=0.025 Sum_probs=49.6
Q ss_pred EEEEeccC-CCCCCCCC---chhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCC----CCC
Q 043492 42 IVVSPQLY-NLMPPKGN---KEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYAT----NPP 113 (278)
Q Consensus 42 ~Vv~~d~~-~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~----~~~ 113 (278)
.|+-+|.| |.|.+... ....+...+ ..+...+...+.....+...++.|.|-|+||.-+-.+|..--+ ...
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 46778875 55554321 111122222 2222223333333344567799999999999877777664211 122
Q ss_pred CCcccceEEecCcCCCC
Q 043492 114 LGLKFSALVGVDPVAGI 130 (278)
Q Consensus 114 ~~~~~~a~v~~~p~~~~ 130 (278)
..+.+++++.-+|+...
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 34688999988877654
No 235
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=73.63 E-value=17 Score=31.52 Aligned_cols=125 Identities=12% Similarity=0.022 Sum_probs=68.2
Q ss_pred EEecC--CCCCceEEEEeCCCCCCCh----hHHHHHH-----------HHHHcCcEEEEeccC-CCCCCC--CC-chhhH
Q 043492 4 IVFPD--NQGKYEVILFFPGTSVSNT----SYSKLFD-----------HLASHGYIVVSPQLY-NLMPPK--GN-KEVDA 62 (278)
Q Consensus 4 i~~P~--~~~~~Pvvv~~hG~~~~~~----~~~~l~~-----------~Las~Gy~Vv~~d~~-~~~~~~--~~-~~~~~ 62 (278)
+|+.+ .+...|+.+++.|..+.+. .+.++.. .|.. -.++-+|.+ |.+.+- .. ....+
T Consensus 20 ly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~ 97 (414)
T KOG1283|consen 20 LYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTN 97 (414)
T ss_pred EeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCccccccc
Confidence 44443 3357899999999886543 2333321 1222 345566653 444322 11 11112
Q ss_pred HHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHhhCCCCCCC---CcccceEEecCcCCCC
Q 043492 63 AAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQGYATNPPL---GLKFSALVGVDPVAGI 130 (278)
Q Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~---~~~~~a~v~~~p~~~~ 130 (278)
..++...|.+-++.++.....+....+.++.-|+||-+|..++......... ...+.++++=++|.++
T Consensus 98 ~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 98 NKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 2222222222234444455667888999999999999999988754332111 1345677776766654
No 236
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=72.83 E-value=4.4 Score=32.40 Aligned_cols=47 Identities=11% Similarity=0.197 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHh---cCCcceeEEecCCCccccCC
Q 043492 150 SIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRC---TSSDRAHFDATYYGHMDVLD 204 (278)
Q Consensus 150 ~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~f~d 204 (278)
++++|-|-|+.| .++...+... ..+.+ +...|..++.+|+||++..+
T Consensus 134 ~taLlTVEGe~D-------DIsg~GQT~A-A~~LC~glp~~~k~~~~~~g~GHYGlF~ 183 (202)
T PF06850_consen 134 RTALLTVEGERD-------DISGPGQTHA-AHDLCTGLPADMKRHHLQPGVGHYGLFN 183 (202)
T ss_pred cceeEEeecCcc-------cCCcchHHHH-HHHHhcCCCHHHhhhcccCCCCeeeccc
Confidence 577888999994 3444433322 22333 33445788899999997643
No 237
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=72.14 E-value=29 Score=31.89 Aligned_cols=103 Identities=17% Similarity=0.068 Sum_probs=56.0
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHH-HHHHHHhhhhhhhcCCccccCCCCce
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAA-AEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
-+-|+.|+..|+-.. +.+.-+ -.+.+.|.-.+.+.=++.-........... ..+++-+.+.++. -.++.+.+
T Consensus 287 ~KPPL~VYFSGyR~a-EGFEgy-~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~-----LgF~~~qL 359 (511)
T TIGR03712 287 FKPPLNVYFSGYRPA-EGFEGY-FMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDY-----LGFDHDQL 359 (511)
T ss_pred CCCCeEEeeccCccc-CcchhH-HHHHhcCCCeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHH-----hCCCHHHe
Confidence 367899999999863 332111 123344444444332222111111111222 2223332222332 23677899
Q ss_pred EEEEeChhHHHHHHHHhhCCCCCCCCcccceEEecCcCC
Q 043492 90 ALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGVDPVA 128 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~ 128 (278)
+|.|-|||-..|+.++.+.. ..|++.--|..
T Consensus 360 ILSGlSMGTfgAlYYga~l~--------P~AIiVgKPL~ 390 (511)
T TIGR03712 360 ILSGLSMGTFGALYYGAKLS--------PHAIIVGKPLV 390 (511)
T ss_pred eeccccccchhhhhhcccCC--------CceEEEcCccc
Confidence 99999999999999998743 35777666655
No 238
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=71.66 E-value=21 Score=29.38 Aligned_cols=85 Identities=13% Similarity=0.008 Sum_probs=45.9
Q ss_pred eEEEEeCCCCCC-ChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEE
Q 043492 14 EVILFFPGTSVS-NTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALM 92 (278)
Q Consensus 14 Pvvv~~hG~~~~-~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~ 92 (278)
|+||+ =||.+. ......+.+...+.|+.++.+-.+-...-... ..+..+++.+.+.+.. ...-+..+|.+=
T Consensus 1 plvvl-~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~----~~~~~~~~il~H 72 (240)
T PF05705_consen 1 PLVVL-LGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---KRLAPAADKLLELLSD----SQSASPPPILFH 72 (240)
T ss_pred CEEEE-EeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---cchHHHHHHHHHHhhh----hccCCCCCEEEE
Confidence 34444 456544 45566677777779999999875332110000 2223333322111111 111122489999
Q ss_pred EeChhHHHHHHHHh
Q 043492 93 GHSRGGLTAFALAQ 106 (278)
Q Consensus 93 GhS~GG~~a~~~a~ 106 (278)
.+|.||...+....
T Consensus 73 ~FSnGG~~~~~~l~ 86 (240)
T PF05705_consen 73 SFSNGGSFLYSQLL 86 (240)
T ss_pred EEECchHHHHHHHH
Confidence 99998887776655
No 239
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=68.42 E-value=2.8 Score=37.47 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=61.2
Q ss_pred CCceEEEEeCCCCCCCh-hHHHHHHHHHHcCcEEEEeccCCCCCCCCCch---hhHHHHHHHHhhh---hhhhcCCcccc
Q 043492 11 GKYEVILFFPGTSVSNT-SYSKLFDHLASHGYIVVSPQLYNLMPPKGNKE---VDAAAEEINWLPK---GLQSHLPENVV 83 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~-~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~---~~~~~~~~~~l~~---~l~~~~~~~~~ 83 (278)
...|+|++.-|++.+.. .+.++.+-|.. .-+.++|+..+.+.-... ..++.++.+.... .++.
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Lld~---NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~------- 130 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLLDG---NQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP------- 130 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhhcc---ceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh-------
Confidence 46799999999997543 34455544433 467889987765442211 1233333333222 2222
Q ss_pred CCCCceEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEe
Q 043492 84 ADLNYSALMGHSRGGLTAFALAQGYATNPPLGLKFSALVG 123 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~ 123 (278)
+=..+.+--|-|=||++++..=.-+|+ ++.+.|.
T Consensus 131 iY~~kWISTG~SKGGmTa~y~rrFyP~------DVD~tVa 164 (448)
T PF05576_consen 131 IYPGKWISTGGSKGGMTAVYYRRFYPD------DVDGTVA 164 (448)
T ss_pred hccCCceecCcCCCceeEEEEeeeCCC------CCCeeee
Confidence 235588999999999999999888887 5666664
No 240
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.12 E-value=10 Score=35.53 Aligned_cols=24 Identities=38% Similarity=0.383 Sum_probs=19.5
Q ss_pred CCCCceEEEEeChhHHHHHHHHhh
Q 043492 84 ADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
-|...|.-+||||||..+=.+..+
T Consensus 523 G~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 523 GDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred CCCCceEEEecccchHHHHHHHHH
Confidence 357789999999999988777654
No 241
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=63.26 E-value=16 Score=28.24 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=27.9
Q ss_pred ceEEEEeCCCCCCChh--HHHHHHHHHHcCcEEEEecc
Q 043492 13 YEVILFFPGTSVSNTS--YSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~--~~~l~~~Las~Gy~Vv~~d~ 48 (278)
.|.|||+-|..++... -..+.+.|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 3789999999998874 35566778889999999984
No 242
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=60.44 E-value=11 Score=27.07 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=25.7
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHc-CcEEEEecc
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASH-GYIVVSPQL 48 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~d~ 48 (278)
||++.|..|+..+ .+++.|+++ |+.++..|.
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 5788888887665 788889987 999999987
No 243
>KOG2585 consensus Uncharacterized conserved protein [Function unknown]
Probab=57.10 E-value=21 Score=32.23 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=29.9
Q ss_pred CCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEec
Q 043492 9 NQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 9 ~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d 47 (278)
+....|.|+++=|-+.+...-.-.+|+|+.+||.++.+=
T Consensus 262 n~~~~P~V~Ilcgpgnnggdg~v~gRHL~~~G~~~vi~~ 300 (453)
T KOG2585|consen 262 NSHQWPLVAILCGPGNNGGDGLVCGRHLAQHGYTPVIYY 300 (453)
T ss_pred ccCCCceEEEEeCCCCccchhHHHHHHHHHcCceeEEEe
Confidence 345678888887777666655569999999999988854
No 244
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=55.18 E-value=1.4e+02 Score=26.91 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=54.6
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchh-------------h------HHHHHHHHhhhhhh
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEV-------------D------AAAEEINWLPKGLQ 75 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~-------------~------~~~~~~~~l~~~l~ 75 (278)
.|+++-=+--..+.+.++.+.+.++|..|+.+|.--.+.+....++ . +-.++++.+.+.+.
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 3444433334446788899999999999999997433322211100 0 11223333322222
Q ss_pred hcCC-ccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 76 SHLP-ENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 76 ~~~~-~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
..+. ....-..+-|.-+|-|.|..++..++...|-
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPi 118 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPI 118 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCC
Confidence 2211 1111224578888999999999999987764
No 245
>PRK02399 hypothetical protein; Provisional
Probab=54.73 E-value=93 Score=28.08 Aligned_cols=92 Identities=17% Similarity=0.161 Sum_probs=52.7
Q ss_pred eCCCC-CCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCc-----hh--------------hHHHHHHHHhhhhhhhcC
Q 043492 19 FPGTS-VSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNK-----EV--------------DAAAEEINWLPKGLQSHL 78 (278)
Q Consensus 19 ~hG~~-~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~-----~~--------------~~~~~~~~~l~~~l~~~~ 78 (278)
+=|.. -..+.+.++.+.+.++|..|+.+|....+.+.... .+ .+-.++++.+.+.....+
T Consensus 8 iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v 87 (406)
T PRK02399 8 IAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAAFV 87 (406)
T ss_pred EEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHHHH
Confidence 33444 34457788888999999999999974333221110 00 011122232222222222
Q ss_pred C-ccccCCCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 79 P-ENVVADLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 79 ~-~~~~~d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
. +...-+.+-|.-+|-|.|..++..++...|-
T Consensus 88 ~~L~~~g~i~gviglGGs~GT~lat~aMr~LPi 120 (406)
T PRK02399 88 RELYERGDVAGVIGLGGSGGTALATPAMRALPI 120 (406)
T ss_pred HHHHhcCCccEEEEecCcchHHHHHHHHHhCCC
Confidence 1 1112245688899999999999999988764
No 246
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=51.17 E-value=21 Score=30.22 Aligned_cols=37 Identities=14% Similarity=0.313 Sum_probs=31.8
Q ss_pred CCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEec
Q 043492 11 GKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d 47 (278)
++.||||++.|+.++.. ....+.+.|-.+|+.|.++.
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~ 91 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFK 91 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCC
Confidence 46799999999997664 56888999999999999975
No 247
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=50.30 E-value=1.3e+02 Score=25.84 Aligned_cols=83 Identities=19% Similarity=0.105 Sum_probs=43.6
Q ss_pred CCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCC-----CCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEe
Q 043492 20 PGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMP-----PKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGH 94 (278)
Q Consensus 20 hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~Gh 94 (278)
-|.|.-...-..-.+.+..-...++++.+..... .+..........+++.+...+.. ++. -+.-|+.|.|-
T Consensus 41 TGtGWVdp~a~~a~E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~-lP~---~~RPkL~l~Ge 116 (289)
T PF10081_consen 41 TGTGWVDPWAVDALEYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWST-LPE---DRRPKLYLYGE 116 (289)
T ss_pred CCCCccCHHHHhHHHHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHh-CCc---ccCCeEEEecc
Confidence 3444433444455566666667777777644311 11111222233344443333332 222 23458999999
Q ss_pred ChhHHHHHHHHh
Q 043492 95 SRGGLTAFALAQ 106 (278)
Q Consensus 95 S~GG~~a~~~a~ 106 (278)
|+|+..+..+..
T Consensus 117 SLGa~g~~~af~ 128 (289)
T PF10081_consen 117 SLGAYGGEAAFD 128 (289)
T ss_pred Cccccchhhhhc
Confidence 999987766554
No 248
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=49.32 E-value=28 Score=30.66 Aligned_cols=26 Identities=23% Similarity=0.213 Sum_probs=21.1
Q ss_pred CCCceEEEEeChhHHHHHHHHhhCCC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~~~ 110 (278)
...+|.|+|||+|+.+.......-.+
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~ 243 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAE 243 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHh
Confidence 55579999999999998888776544
No 249
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=49.25 E-value=29 Score=26.63 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=25.5
Q ss_pred eEEEEeCCCCCCCh--------------------hHHHHHHHHHHcCcEEEE
Q 043492 14 EVILFFPGTSVSNT--------------------SYSKLFDHLASHGYIVVS 45 (278)
Q Consensus 14 Pvvv~~hG~~~~~~--------------------~~~~l~~~Las~Gy~Vv~ 45 (278)
--+|++|++.|+.- .-.++|.+|++.||...+
T Consensus 81 AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C 132 (170)
T KOG3349|consen 81 ADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYC 132 (170)
T ss_pred ccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEe
Confidence 46889999887532 346789999999999988
No 250
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=49.20 E-value=74 Score=25.11 Aligned_cols=64 Identities=22% Similarity=0.361 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHc-CcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHh
Q 043492 28 SYSKLFDHLASH-GYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 28 ~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~ 106 (278)
....+.+.++.. |+++++|.|.++ -..-+..++||+... .+....+++++.|.|+...+.+..
T Consensus 57 ~v~~~~~~i~~aD~li~~tPeYn~s-------~pg~lKnaiD~l~~~---------~~~~Kpv~~~~~s~g~~~~~~a~~ 120 (184)
T COG0431 57 AVQALREAIAAADGLIIATPEYNGS-------YPGALKNAIDWLSRE---------ALGGKPVLLLGTSGGGAGGLRAQN 120 (184)
T ss_pred HHHHHHHHHHhCCEEEEECCccCCC-------CCHHHHHHHHhCCHh---------HhCCCcEEEEecCCCchhHHHHHH
Confidence 344455555444 555555665432 112356677775432 234568889999988887776654
Q ss_pred h
Q 043492 107 G 107 (278)
Q Consensus 107 ~ 107 (278)
.
T Consensus 121 ~ 121 (184)
T COG0431 121 Q 121 (184)
T ss_pred H
Confidence 4
No 251
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=48.32 E-value=69 Score=28.26 Aligned_cols=68 Identities=12% Similarity=0.059 Sum_probs=46.9
Q ss_pred HHHHHHHHHcCcEEEEeccCCC------------CCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChh
Q 043492 30 SKLFDHLASHGYIVVSPQLYNL------------MPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRG 97 (278)
Q Consensus 30 ~~l~~~Las~Gy~Vv~~d~~~~------------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~G 97 (278)
..+.+.|+++|+.|.++-+.-. .-++++.++..+..++..+.+ ++.. ++=++|.++|
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP~~~~~~i~~ik~----l~~~-------~iPifGICLG 259 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPGDPAPLDYAIETIKE----LLGT-------KIPIFGICLG 259 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCChhHHHHHHHHHHH----Hhcc-------CCCeEEEcHH
Confidence 4789999999999998765332 124456677777777776433 2221 4478899999
Q ss_pred HHHHHHHHhhC
Q 043492 98 GLTAFALAQGY 108 (278)
Q Consensus 98 G~~a~~~a~~~ 108 (278)
=.+...+.+..
T Consensus 260 HQllalA~Ga~ 270 (368)
T COG0505 260 HQLLALALGAK 270 (368)
T ss_pred HHHHHHhcCCc
Confidence 98777766553
No 252
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=48.00 E-value=30 Score=26.98 Aligned_cols=32 Identities=22% Similarity=0.139 Sum_probs=22.3
Q ss_pred EeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccC
Q 043492 18 FFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 18 ~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
+.++-||... .-..++..|+.+|+.|+.+|..
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 3444444443 4467899999999999999973
No 253
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=46.79 E-value=11 Score=31.55 Aligned_cols=15 Identities=33% Similarity=0.605 Sum_probs=13.1
Q ss_pred CCCceEEEEeChhHH
Q 043492 85 DLNYSALMGHSRGGL 99 (278)
Q Consensus 85 d~~~i~l~GhS~GG~ 99 (278)
+.+.|.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 568999999999974
No 254
>PRK11253 ldcA L,D-carboxypeptidase A; Provisional
Probab=45.96 E-value=75 Score=27.47 Aligned_cols=36 Identities=14% Similarity=0.115 Sum_probs=24.7
Q ss_pred EEEEeCCCCC-CChhHHHHHHHHHHcCcEEEEeccCC
Q 043492 15 VILFFPGTSV-SNTSYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 15 vvv~~hG~~~-~~~~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
+-|+++..+. ..+.+..-.+.|.++||.|+..++..
T Consensus 4 I~viAPSs~~~~~~~~~~~i~~L~~~G~~v~~~~~~~ 40 (305)
T PRK11253 4 FHLIAPSGYPIDQAAALRGVQRLTDAGHQVENVEVIA 40 (305)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhCCCEEeeccccc
Confidence 3455555433 45567777788999999988877643
No 255
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=45.68 E-value=69 Score=25.50 Aligned_cols=64 Identities=14% Similarity=0.081 Sum_probs=41.6
Q ss_pred CceEEEEeCCCCC---CChhHHHHHHHHHHcCcEEEEeccCC--CCCCCCCchhhHHHHHHHHhhhhhh
Q 043492 12 KYEVILFFPGTSV---SNTSYSKLFDHLASHGYIVVSPQLYN--LMPPKGNKEVDAAAEEINWLPKGLQ 75 (278)
Q Consensus 12 ~~Pvvv~~hG~~~---~~~~~~~l~~~Las~Gy~Vv~~d~~~--~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (278)
..+.++++||..- ....-..+.+.|.+.|..+...-+++ ++............++++|+.+.++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 4577889999873 34566788899999998776666554 3323222333456677788765443
No 256
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=43.93 E-value=28 Score=29.71 Aligned_cols=30 Identities=33% Similarity=0.474 Sum_probs=25.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
.-|.|+|..|.++ ..++|+..||.|+..|+
T Consensus 251 ~vPmi~fakG~g~-------~Le~l~~tG~DVvgLDW 280 (359)
T KOG2872|consen 251 PVPMILFAKGSGG-------ALEELAQTGYDVVGLDW 280 (359)
T ss_pred CCceEEEEcCcch-------HHHHHHhcCCcEEeecc
Confidence 4689999999764 57889999999999996
No 257
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=43.63 E-value=1.1e+02 Score=21.20 Aligned_cols=69 Identities=23% Similarity=0.309 Sum_probs=42.4
Q ss_pred ChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEE-E--eChhHHHHH
Q 043492 26 NTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALM-G--HSRGGLTAF 102 (278)
Q Consensus 26 ~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~-G--hS~GG~~a~ 102 (278)
...+...++.|.+.||.|+.|-.. ..+.......-+...+..|. +-+.|.++ | +|-|+.+=.
T Consensus 15 ~~~f~~~a~~L~~~G~~vvnPa~~--~~~~~~~~~~ym~~~l~~L~-------------~cD~i~~l~gWe~S~GA~~E~ 79 (92)
T PF14359_consen 15 RPAFNAAAKRLRAKGYEVVNPAEL--GIPEGLSWEEYMRICLAMLS-------------DCDAIYMLPGWENSRGARLEH 79 (92)
T ss_pred HHHHHHHHHHHHHCCCEEeCchhh--CCCCCCCHHHHHHHHHHHHH-------------hCCEEEEcCCcccCcchHHHH
Confidence 456778899999999999998765 22222233333333344432 12244444 3 799999888
Q ss_pred HHHhhCC
Q 043492 103 ALAQGYA 109 (278)
Q Consensus 103 ~~a~~~~ 109 (278)
.+|.+..
T Consensus 80 ~~A~~lG 86 (92)
T PF14359_consen 80 ELAKKLG 86 (92)
T ss_pred HHHHHCC
Confidence 8887643
No 258
>PF13728 TraF: F plasmid transfer operon protein
Probab=43.05 E-value=68 Score=26.15 Aligned_cols=45 Identities=18% Similarity=0.363 Sum_probs=37.8
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHc-CcEEEEeccCCCCCCC
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASH-GYIVVSPQLYNLMPPK 55 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~d~~~~~~~~ 55 (278)
+++.+++|.-|.+..+.....+++.|+.. |+.|+.++..|.+.+.
T Consensus 120 ~~~gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~ 165 (215)
T PF13728_consen 120 QKYGLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPS 165 (215)
T ss_pred hCeEEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcC
Confidence 56789999999988888899999998875 9999999988765544
No 259
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=42.58 E-value=31 Score=26.88 Aligned_cols=35 Identities=26% Similarity=0.216 Sum_probs=26.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEe
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSP 46 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~ 46 (278)
+.+.|+++-|-|.+...=-.++++|+.+||.|.++
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 45677777787777777778999999999999883
No 260
>COG3101 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.51 E-value=24 Score=26.54 Aligned_cols=23 Identities=30% Similarity=0.469 Sum_probs=18.1
Q ss_pred EEecCCC-CCceEEEEeCCCCCCC
Q 043492 4 IVFPDNQ-GKYEVILFFPGTSVSN 26 (278)
Q Consensus 4 i~~P~~~-~~~Pvvv~~hG~~~~~ 26 (278)
||.|.+. .++-.|+|.||+..+.
T Consensus 32 iYlPAde~vpyhri~FA~GfYaSa 55 (180)
T COG3101 32 IYLPADEEVPYHRIVFAHGFYASA 55 (180)
T ss_pred eeccCccCCCceeEEEechhHHHH
Confidence 6788754 4888999999987654
No 261
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=42.04 E-value=37 Score=27.75 Aligned_cols=30 Identities=27% Similarity=0.272 Sum_probs=22.8
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+.=|+++|.|-+.. +..||++||.|+++|.
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 34577788776533 5668999999999995
No 262
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=41.36 E-value=65 Score=22.12 Aligned_cols=32 Identities=22% Similarity=0.160 Sum_probs=21.2
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEe
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSP 46 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~ 46 (278)
...|+||+++.... -...++.|.+.||.|..+
T Consensus 60 ~~~~ivv~C~~G~r----s~~aa~~L~~~G~~~~~l 91 (100)
T cd01523 60 DDQEVTVICAKEGS----SQFVAELLAERGYDVDYL 91 (100)
T ss_pred CCCeEEEEcCCCCc----HHHHHHHHHHcCceeEEe
Confidence 34678888775432 245677889999985443
No 263
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=41.33 E-value=2.5e+02 Score=24.72 Aligned_cols=94 Identities=18% Similarity=0.087 Sum_probs=49.3
Q ss_pred CCceEEEEeCCCCC----CC-hhHHHHHHHHHH-cCcEEEEeccCCCCCCCCCchhhHHHH---------HHHH-hhhhh
Q 043492 11 GKYEVILFFPGTSV----SN-TSYSKLFDHLAS-HGYIVVSPQLYNLMPPKGNKEVDAAAE---------EINW-LPKGL 74 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~----~~-~~~~~l~~~Las-~Gy~Vv~~d~~~~~~~~~~~~~~~~~~---------~~~~-l~~~l 74 (278)
..+.+|+++-|... .+ .+--.|..-|.. .|-.+++.=..|.|.-+... +-+..+ +-.| |.+++
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfda-vvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDA-VVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchh-hHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 35668899888762 22 344445555555 57777775446665433211 111100 1111 11112
Q ss_pred h----hcCCccccCCCCceEEEEeChhHHHHHHHHhh
Q 043492 75 Q----SHLPENVVADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 75 ~----~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
. .++.. .. --++|.++|+|.|+..|-.+|+-
T Consensus 108 ~~AYrFL~~~-ye-pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFN-YE-PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHh-cC-CCCeEEEeeccchhHHHHHHHHH
Confidence 1 11111 11 23699999999999998877764
No 264
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=40.54 E-value=43 Score=31.74 Aligned_cols=48 Identities=15% Similarity=0.236 Sum_probs=33.3
Q ss_pred CC-CCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhc---C--CcceeEEecCCCcccc
Q 043492 148 NF-SIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCT---S--SDRAHFDATYYGHMDV 202 (278)
Q Consensus 148 ~~-~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~---~--~~~~~~~~~g~~H~~f 202 (278)
++ .+|.+++||.. |...|.......++...+ . ....++++.++-||+-
T Consensus 552 ~L~GKPaIiVhGR~-------DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 552 NLHGKPAIIVHGRS-------DALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CcCCCceEEEeccc-------ceecccCCCchHHHHHhhhhcccccceeEEEecCCeechh
Confidence 56 69999999999 677777544444442221 2 2237899999999974
No 265
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=40.50 E-value=75 Score=23.21 Aligned_cols=14 Identities=21% Similarity=0.278 Sum_probs=11.3
Q ss_pred HHHHHHcCcEEEEe
Q 043492 33 FDHLASHGYIVVSP 46 (278)
Q Consensus 33 ~~~Las~Gy~Vv~~ 46 (278)
-+.|.+.|+.|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 45688999999875
No 266
>PF08257 Sulfakinin: Sulfakinin family; InterPro: IPR013259 The sulfakinin (SK) family of neuropeptides have only been identified in crustaceans and insects. For most species there is the potential for producing two sulfakinin peptides, one has a short sulfakinin sequence. The function of the sulfakinins is difficult to assess. For the Periplaneta americana (American cockroach), various forms of the endogenous sulfakinins have been shown to be active on the hindgut, and also on the heart. In Calliphora vomitoria (Blue blowfly) the peptides act as neurotransmitters or neuromodulators, linking the brain with all thoracic and abdominal ganglia. In adults of Penaeus monodon (Penoeid shrimp) they appear to be restricted to a few neurones in the brain with a neural pathway extending along to the ventral thoracic and abdominal ganglia [].
Probab=39.88 E-value=15 Score=13.73 Aligned_cols=7 Identities=57% Similarity=1.028 Sum_probs=3.9
Q ss_pred cCCCccc
Q 043492 195 TYYGHMD 201 (278)
Q Consensus 195 ~g~~H~~ 201 (278)
.+.||+-
T Consensus 2 ~dyghmr 8 (9)
T PF08257_consen 2 DDYGHMR 8 (9)
T ss_pred Ccccccc
Confidence 4566663
No 267
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=39.83 E-value=2.2e+02 Score=23.84 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=25.9
Q ss_pred CCCceEEEEeCCCCCCChh-HHHHHHHHHHcCcE-EEEecc
Q 043492 10 QGKYEVILFFPGTSVSNTS-YSKLFDHLASHGYI-VVSPQL 48 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~~-~~~l~~~Las~Gy~-Vv~~d~ 48 (278)
.++.|-|+|++-.++.... ...+.+.|.+.|+. |..++.
T Consensus 25 g~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i 65 (250)
T TIGR02069 25 GGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDV 65 (250)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEec
Confidence 3456788888876665544 45566778899984 555554
No 268
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=39.12 E-value=1.2e+02 Score=24.45 Aligned_cols=23 Identities=22% Similarity=0.075 Sum_probs=18.4
Q ss_pred ceEEEEeCh----hHHHHHHHHhhCCC
Q 043492 88 YSALMGHSR----GGLTAFALAQGYAT 110 (278)
Q Consensus 88 ~i~l~GhS~----GG~~a~~~a~~~~~ 110 (278)
.+.++|||. |+.++-.+|.+...
T Consensus 110 ~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 110 DLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred CEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 689999999 88888888876543
No 269
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=39.07 E-value=38 Score=27.99 Aligned_cols=37 Identities=22% Similarity=0.402 Sum_probs=31.3
Q ss_pred CceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEecc
Q 043492 12 KYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+.||||++.|+.++.. ....+.+.|-.+|+.|.++.-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~ 67 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPK 67 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 4699999999997664 568888999999999999763
No 270
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=38.15 E-value=43 Score=28.98 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=23.9
Q ss_pred CCceEEEEeCCCCCCChhH--HHHHHHHHHcCcE
Q 043492 11 GKYEVILFFPGTSVSNTSY--SKLFDHLASHGYI 42 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~--~~l~~~Las~Gy~ 42 (278)
.++|+++=+||+.|+..+| .-+++.+-+-|-.
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl~ 140 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGLR 140 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcccc
Confidence 5789999999999999887 3455665555543
No 271
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=38.13 E-value=26 Score=29.61 Aligned_cols=24 Identities=29% Similarity=0.318 Sum_probs=19.3
Q ss_pred CCceEEEEeChhHHHHHHHHhhCC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYA 109 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~ 109 (278)
...-.++|||+|=++|+.+++...
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~ls 105 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGALD 105 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCCCC
Confidence 345689999999999998887543
No 272
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=37.96 E-value=21 Score=30.85 Aligned_cols=24 Identities=29% Similarity=0.459 Sum_probs=19.5
Q ss_pred CCceEEEEeChhHHHHHHHHhhCC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYA 109 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~ 109 (278)
...-+++|||+|=..|+.+++...
T Consensus 83 i~P~~v~GhSlGE~aA~~aaG~ls 106 (318)
T PF00698_consen 83 IKPDAVIGHSLGEYAALVAAGALS 106 (318)
T ss_dssp HCESEEEESTTHHHHHHHHTTSSS
T ss_pred cccceeeccchhhHHHHHHCCccc
Confidence 456689999999999998887543
No 273
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=37.85 E-value=29 Score=29.53 Aligned_cols=24 Identities=38% Similarity=0.312 Sum_probs=20.0
Q ss_pred CCCceEEEEeChhHHHHHHHHhhC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
..++|.++|+|.|+.+|=.++..-
T Consensus 90 ~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 90 PGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred CcceEEEEecCccHHHHHHHHHHH
Confidence 346899999999999998888654
No 274
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=37.80 E-value=29 Score=29.50 Aligned_cols=23 Identities=30% Similarity=0.362 Sum_probs=18.6
Q ss_pred CCceEEEEeChhHHHHHHHHhhC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~ 108 (278)
...-.++|||+|-..|+.+++..
T Consensus 81 i~p~~~~GhSlGE~aA~~~ag~~ 103 (298)
T smart00827 81 VRPDAVVGHSLGEIAAAYVAGVL 103 (298)
T ss_pred CcccEEEecCHHHHHHHHHhCCC
Confidence 34558999999999999888654
No 275
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=37.75 E-value=53 Score=29.13 Aligned_cols=33 Identities=30% Similarity=0.250 Sum_probs=25.4
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCC
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
|+|+|... +..|..+++.|+++|+.|.++-..+
T Consensus 2 il~~~~~~--p~~~~~la~~L~~~G~~v~~~~~~~ 34 (396)
T cd03818 2 ILFVHQNF--PGQFRHLAPALAAQGHEVVFLTEPN 34 (396)
T ss_pred EEEECCCC--chhHHHHHHHHHHCCCEEEEEecCC
Confidence 67777743 3457899999999999999876543
No 276
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=36.27 E-value=25 Score=30.45 Aligned_cols=23 Identities=30% Similarity=0.327 Sum_probs=19.6
Q ss_pred CCCceEEEEeChhHHHHHHHHhh
Q 043492 85 DLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
+.....+.|||+|=+.|+.++..
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag~ 105 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAGV 105 (310)
T ss_pred CCCCceeecccHhHHHHHHHccc
Confidence 55677999999999999998873
No 277
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=36.13 E-value=3e+02 Score=24.20 Aligned_cols=124 Identities=13% Similarity=0.130 Sum_probs=66.6
Q ss_pred EEeCCCCCCChh-HHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeC
Q 043492 17 LFFPGTSVSNTS-YSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHS 95 (278)
Q Consensus 17 v~~hG~~~~~~~-~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS 95 (278)
|+.|..|+.+.. -..-.++--.+||-|+.+|..|.-... ..+++.|.+ +.+++.....-.+..+.++--+
T Consensus 197 vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk--------~nLM~EL~K-I~rV~~k~~~~ap~e~llvlDA 267 (340)
T COG0552 197 VISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNK--------KNLMDELKK-IVRVIKKDDPDAPHEILLVLDA 267 (340)
T ss_pred EEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCc--------hhHHHHHHH-HHHHhccccCCCCceEEEEEEc
Confidence 445445555542 233445566678999999976643222 223333322 2222222111235678888899
Q ss_pred hhHHHHHHHHhhCCCCCCCCcccceEEecCcCCCCCCCCCCCCCCccccCccCCCCCeEEEe-cCC
Q 043492 96 RGGLTAFALAQGYATNPPLGLKFSALVGVDPVAGIPYFHSELDPPILDYESFNFSIPVTVIG-TGL 160 (278)
Q Consensus 96 ~GG~~a~~~a~~~~~~~~~~~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~-g~~ 160 (278)
.-|.-++.-|....+. ..+.++++.- .++...+ +.+ +. -...+++|+++|+ |+.
T Consensus 268 ttGqnal~QAk~F~ea----v~l~GiIlTK-lDgtAKG-G~i----l~-I~~~l~~PI~fiGvGE~ 322 (340)
T COG0552 268 TTGQNALSQAKIFNEA----VGLDGIILTK-LDGTAKG-GII----LS-IAYELGIPIKFIGVGEG 322 (340)
T ss_pred ccChhHHHHHHHHHHh----cCCceEEEEe-cccCCCc-cee----ee-HHHHhCCCEEEEeCCCC
Confidence 9999999988765442 2466666521 2222121 111 11 1135889999995 554
No 278
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=35.31 E-value=41 Score=24.51 Aligned_cols=23 Identities=17% Similarity=0.378 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHcCcEEEEeccCC
Q 043492 28 SYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 28 ~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
.|...++.|+++|+.|++.|--.
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~~ 46 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDINE 46 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEeccc
Confidence 57899999999999999999643
No 279
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=34.75 E-value=34 Score=29.12 Aligned_cols=24 Identities=29% Similarity=0.173 Sum_probs=19.5
Q ss_pred CCceEEEEeChhHHHHHHHHhhCC
Q 043492 86 LNYSALMGHSRGGLTAFALAQGYA 109 (278)
Q Consensus 86 ~~~i~l~GhS~GG~~a~~~a~~~~ 109 (278)
.....++|||+|=..|+.+++...
T Consensus 75 ~~P~~v~GhS~GE~aAa~~aG~~s 98 (295)
T TIGR03131 75 PRPSAVAGYSVGEYAAAVVAGVLT 98 (295)
T ss_pred CCCcEEeecCHHHHHHHHHhCCCC
Confidence 356789999999999998887543
No 280
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=34.59 E-value=48 Score=27.32 Aligned_cols=28 Identities=21% Similarity=0.230 Sum_probs=20.3
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
=|+++|.|-+ .=+..||++||.|+++|.
T Consensus 46 rvLvPgCGkg-----~D~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCS-----IDMLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCCh-----HHHHHHHhCCCcEEEEec
Confidence 4566665543 335668999999999996
No 281
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=34.15 E-value=3.2e+02 Score=24.72 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=23.9
Q ss_pred CceEEEEe--CCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 12 KYEVILFF--PGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 12 ~~Pvvv~~--hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+.|+||+- |.-.........-.+.|.+.|+.|+-+..
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~ 154 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPAS 154 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCC
Confidence 45666554 23233344556667889999999998764
No 282
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=34.04 E-value=2.2e+02 Score=23.98 Aligned_cols=39 Identities=13% Similarity=-0.016 Sum_probs=29.8
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCC
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNL 51 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~ 51 (278)
...|++.-|..++...+...++.+.+.|-.=+++=|+|.
T Consensus 132 gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~ 170 (260)
T TIGR01361 132 GKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCERGI 170 (260)
T ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCC
Confidence 347889999999999999999999998874333334544
No 283
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=34.00 E-value=63 Score=28.64 Aligned_cols=50 Identities=18% Similarity=0.147 Sum_probs=34.7
Q ss_pred cCCCCCeEEEecCCCCCcCCCCCCCCccccHHHHHHHhcCCcceeEEecCCCccccCC
Q 043492 147 FNFSIPVTVIGTGLGGLAKCVVPCAPEKENHQQFFNRCTSSDRAHFDATYYGHMDVLD 204 (278)
Q Consensus 147 ~~~~~P~Lii~g~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~H~~f~d 204 (278)
.++++|+|+++-+. |...|.. ...+..+.+........+-...||-.|+-
T Consensus 303 ~~i~~~~lv~gi~s-------D~lfp~~-~~~~~~~~L~~~~~~~~i~S~~GHDaFL~ 352 (368)
T COG2021 303 ARIKAPVLVVGITS-------DWLFPPE-LQRALAEALPAAGALREIDSPYGHDAFLV 352 (368)
T ss_pred hcCccCEEEEEecc-------cccCCHH-HHHHHHHhccccCceEEecCCCCchhhhc
Confidence 46899999998887 6777763 34555566665553445556889988853
No 284
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=33.88 E-value=70 Score=27.58 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=25.9
Q ss_pred CceEEEEeCCCCCC-----ChhHHHHHHHHHHcCcEEEE
Q 043492 12 KYEVILFFPGTSVS-----NTSYSKLFDHLASHGYIVVS 45 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~-----~~~~~~l~~~Las~Gy~Vv~ 45 (278)
..|.|++.||.... .+.|..+++.|.+.|+.|+.
T Consensus 177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 177 AGPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 34678888987642 34789999999999998765
No 285
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=33.68 E-value=84 Score=20.74 Aligned_cols=22 Identities=27% Similarity=0.181 Sum_probs=18.4
Q ss_pred ChhHHHHHHHHHHcCcEEEEec
Q 043492 26 NTSYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 26 ~~~~~~l~~~Las~Gy~Vv~~d 47 (278)
...-..+++.|++.|+.|+.+|
T Consensus 13 tt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 13 TTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHHHCCCeEEEEC
Confidence 3455788999999999999988
No 286
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=33.31 E-value=1.8e+02 Score=20.71 Aligned_cols=80 Identities=13% Similarity=0.063 Sum_probs=47.0
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
..|+|||+--+.........+...+.. .+.|+=+|-... ..++...+..+ .+.--.-+|.+
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v-~~~vvELD~~~~--------g~eiq~~l~~~----------tg~~tvP~vFI 73 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGV-NPKVVELDEDED--------GSEIQKALKKL----------TGQRTVPNVFI 73 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCC-CCEEEEccCCCC--------cHHHHHHHHHh----------cCCCCCCEEEE
Confidence 568999999666555444444444222 256666663211 11333333322 11124558999
Q ss_pred EEeChhHHHHHHHHhhCCC
Q 043492 92 MGHSRGGLTAFALAQGYAT 110 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~~~ 110 (278)
-|.+.||.--+........
T Consensus 74 ~Gk~iGG~~dl~~lh~~G~ 92 (104)
T KOG1752|consen 74 GGKFIGGASDLMALHKSGE 92 (104)
T ss_pred CCEEEcCHHHHHHHHHcCC
Confidence 9999999988888776553
No 287
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=33.31 E-value=1.7e+02 Score=23.91 Aligned_cols=39 Identities=36% Similarity=0.495 Sum_probs=30.2
Q ss_pred CCceEEEEeCCCCCCChh--H-HHHHHHHHHcCcEEEEeccC
Q 043492 11 GKYEVILFFPGTSVSNTS--Y-SKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~--~-~~l~~~Las~Gy~Vv~~d~~ 49 (278)
++.+.|.|++=.++..+. | ....+.|++.|+.|..++..
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 446799999999887765 4 44557799999999988753
No 288
>CHL00175 minD septum-site determining protein; Validated
Probab=33.25 E-value=1.1e+02 Score=25.79 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=29.4
Q ss_pred CceEEEEeCCCCCCChh--HHHHHHHHHHcCcEEEEecc
Q 043492 12 KYEVILFFPGTSVSNTS--YSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~--~~~l~~~Las~Gy~Vv~~d~ 48 (278)
...+|.+..|-||.... -..++..|+++|+.|+.+|.
T Consensus 14 ~~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~ 52 (281)
T CHL00175 14 MSRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDA 52 (281)
T ss_pred CceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 34578888877776654 46788999999999999997
No 289
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=33.14 E-value=85 Score=23.45 Aligned_cols=35 Identities=20% Similarity=0.375 Sum_probs=23.0
Q ss_pred CceEEEEeCCCCCCC-------------hhH-----------HHHHHHHHHcCcEEEEe
Q 043492 12 KYEVILFFPGTSVSN-------------TSY-----------SKLFDHLASHGYIVVSP 46 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~-------------~~~-----------~~l~~~Las~Gy~Vv~~ 46 (278)
++..|||+||--+.. +.| ..-...|...|+.|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 577999999976421 111 11245578889999885
No 290
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=33.07 E-value=2.5e+02 Score=25.30 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=39.4
Q ss_pred ceEEEEeC--CCCCCChhHHHHHHHHHHcCcEEEEeccCCC-CCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 13 YEVILFFP--GTSVSNTSYSKLFDHLASHGYIVVSPQLYNL-MPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 13 ~Pvvv~~h--G~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
.|+|+.-- ...........-.+.|.+.|+.|+-+..-.. +...+.....+..++++.+.+.+... ..+.-.++
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~----~~~~~~~v 188 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFSPK----EDLEGKRV 188 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHhhc----cccCCceE
Confidence 45554433 3344444566777889999999988774111 11122333444555555543333221 11333456
Q ss_pred EEEEe
Q 043492 90 ALMGH 94 (278)
Q Consensus 90 ~l~Gh 94 (278)
.+.|-
T Consensus 189 lit~g 193 (390)
T TIGR00521 189 LITAG 193 (390)
T ss_pred EEecC
Confidence 66655
No 291
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=32.37 E-value=1.1e+02 Score=32.06 Aligned_cols=83 Identities=18% Similarity=0.161 Sum_probs=47.7
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceE
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSA 90 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~ 90 (278)
...|.++|+|-.-|.......++..|. +-.+..... .......++.+..+..+.++.+.+. ...-
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---~PaYglQ~T------~~vP~dSies~A~~yirqirkvQP~------GPYr 2185 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---IPAYGLQCT------EAVPLDSIESLAAYYIRQIRKVQPE------GPYR 2185 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---Ccchhhhcc------ccCCcchHHHHHHHHHHHHHhcCCC------CCee
Confidence 467889999988776655555544332 111111111 1112233444444444445554332 4677
Q ss_pred EEEeChhHHHHHHHHhhC
Q 043492 91 LMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 91 l~GhS~GG~~a~~~a~~~ 108 (278)
++|+|+|+.++...|...
T Consensus 2186 l~GYSyG~~l~f~ma~~L 2203 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQL 2203 (2376)
T ss_pred eeccchhHHHHHHHHHHH
Confidence 889999999999888754
No 292
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=31.70 E-value=78 Score=20.72 Aligned_cols=8 Identities=13% Similarity=0.355 Sum_probs=4.0
Q ss_pred eEEEEeCC
Q 043492 14 EVILFFPG 21 (278)
Q Consensus 14 Pvvv~~hG 21 (278)
|.++++||
T Consensus 32 ~~~~lvhG 39 (71)
T PF10686_consen 32 PDMVLVHG 39 (71)
T ss_pred CCEEEEEC
Confidence 44455555
No 293
>PHA02114 hypothetical protein
Probab=31.69 E-value=75 Score=22.34 Aligned_cols=36 Identities=25% Similarity=0.437 Sum_probs=25.1
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEec
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d 47 (278)
.+.+||+--.+..++.-|-..+..|-..||.|++-.
T Consensus 81 ~~gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 81 QYGTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred hcCeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 456666666666677777777777777777777643
No 294
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=31.61 E-value=1.4e+02 Score=23.78 Aligned_cols=38 Identities=13% Similarity=0.011 Sum_probs=28.2
Q ss_pred CCceEEEEeCCCCCCCh--hHHHHHHHHHH-cCcEEEEecc
Q 043492 11 GKYEVILFFPGTSVSNT--SYSKLFDHLAS-HGYIVVSPQL 48 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~--~~~~l~~~Las-~Gy~Vv~~d~ 48 (278)
+...+|.+.-+-+|... .-..++..|+. +|+.|+.+|.
T Consensus 33 ~~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~ 73 (207)
T TIGR03018 33 KNNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDA 73 (207)
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 35667888876665544 45678899996 6999999986
No 295
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=31.40 E-value=73 Score=24.35 Aligned_cols=30 Identities=30% Similarity=0.215 Sum_probs=23.0
Q ss_pred CCCCCCChhHHHHHHHHHHcCcEEEEeccC
Q 043492 20 PGTSVSNTSYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 20 hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
.|+-|....-..++..|+++|+.|+.+|..
T Consensus 8 kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 8 KGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 344444455678899999999999999863
No 296
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=31.29 E-value=53 Score=26.87 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=24.0
Q ss_pred CceEEEEeCCCCCC-----ChhHHHHHHHHHHcCcEEEEec
Q 043492 12 KYEVILFFPGTSVS-----NTSYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~-----~~~~~~l~~~Las~Gy~Vv~~d 47 (278)
+.+.|++.+|.+.. .+.|..+++.|.+.|+.|+.+-
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 56889999998863 3468899999999997777643
No 297
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=31.23 E-value=30 Score=28.53 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=29.0
Q ss_pred CceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEecc
Q 043492 12 KYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+.||||++.|+.++.. ....+.+.|-.+|+.|.++.-
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~ 67 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGK 67 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCC
Confidence 4689999999998876 457777888889999999773
No 298
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=31.04 E-value=93 Score=23.76 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=26.5
Q ss_pred EEeCCCCCCChh--HHHHHHHHHHcCcEEEEeccCCC
Q 043492 17 LFFPGTSVSNTS--YSKLFDHLASHGYIVVSPQLYNL 51 (278)
Q Consensus 17 v~~hG~~~~~~~--~~~l~~~Las~Gy~Vv~~d~~~~ 51 (278)
+.+-|..++.+. ...+++.|..+||.|.++.|..+
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~ 38 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHH 38 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 445577766654 47888999999999999987644
No 299
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=30.96 E-value=95 Score=24.96 Aligned_cols=36 Identities=17% Similarity=0.133 Sum_probs=28.8
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
++.|.+|-+-|..|+..+ .+++.|.+.|+.|+..|-
T Consensus 2 ~~~~~~igitG~igsGKS--t~~~~l~~~g~~v~d~D~ 37 (208)
T PRK14731 2 RSLPFLVGVTGGIGSGKS--TVCRFLAEMGCELFEADR 37 (208)
T ss_pred CCCCEEEEEECCCCCCHH--HHHHHHHHCCCeEEeccH
Confidence 456788888887777665 788889999999998883
No 300
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=30.77 E-value=1.1e+02 Score=27.73 Aligned_cols=38 Identities=26% Similarity=0.217 Sum_probs=27.9
Q ss_pred ceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCC
Q 043492 13 YEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
..+|.+...=||..+ .-..++..||..|+.|+.+|...
T Consensus 121 ~~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDp 160 (405)
T PRK13869 121 LQVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDP 160 (405)
T ss_pred ceEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCC
Confidence 356666665555444 45778899999999999999743
No 301
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=30.40 E-value=1.6e+02 Score=24.60 Aligned_cols=45 Identities=13% Similarity=0.410 Sum_probs=36.8
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHH-cCcEEEEeccCCCCCCC
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLAS-HGYIVVSPQLYNLMPPK 55 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las-~Gy~Vv~~d~~~~~~~~ 55 (278)
+.+.+++|.-|-+.-...+..+.+.++. +|+.|+.+...|.+.+.
T Consensus 143 ~~~GL~fFy~s~Cp~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p~ 188 (248)
T PRK13703 143 EHYGLMFFYRGQDPIDGQLAQVINDFRDTYGLSVIPVSVDGVINPL 188 (248)
T ss_pred hcceEEEEECCCCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCC
Confidence 4577889999888888889999998887 49999998887765544
No 302
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.23 E-value=1.6e+02 Score=25.12 Aligned_cols=19 Identities=47% Similarity=0.746 Sum_probs=16.7
Q ss_pred EEEEeChhHHHHHHHHhhC
Q 043492 90 ALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~ 108 (278)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7889999999999998754
No 303
>PRK03094 hypothetical protein; Provisional
Probab=30.02 E-value=58 Score=22.01 Aligned_cols=22 Identities=27% Similarity=0.360 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHcCcEEEEecc
Q 043492 27 TSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 27 ~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
...+.+.+.|.++||.|+-+..
T Consensus 8 ~~Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 8 QSLTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred cCcHHHHHHHHHCCCEEEecCc
Confidence 3457899999999999998764
No 304
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=29.95 E-value=1.6e+02 Score=20.60 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=23.2
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEec
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d 47 (278)
...|+||++.+... ..-...+..|...||.|..++
T Consensus 63 ~~~~vvvyc~~g~~--~~s~~~a~~l~~~G~~v~~l~ 97 (110)
T cd01521 63 KEKLFVVYCDGPGC--NGATKAALKLAELGFPVKEMI 97 (110)
T ss_pred CCCeEEEEECCCCC--chHHHHHHHHHHcCCeEEEec
Confidence 35689999876432 123456677888999866554
No 305
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=29.35 E-value=99 Score=26.96 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=28.0
Q ss_pred ceEEEEeCC-CCC-----CChhHHHHHHHHHHcCcEEEEec
Q 043492 13 YEVILFFPG-TSV-----SNTSYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 13 ~Pvvv~~hG-~~~-----~~~~~~~l~~~Las~Gy~Vv~~d 47 (278)
.|.|++.|| ..+ +.+.|..+++.|-.+|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 589999999 442 33589999999999998888744
No 306
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=29.33 E-value=38 Score=29.71 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=16.4
Q ss_pred EEEEeChhHHHHHHHHhhC
Q 043492 90 ALMGHSRGGLTAFALAQGY 108 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~~ 108 (278)
.++|||+|=+.|+.+++..
T Consensus 127 ~~~GHSlGE~aA~~~AG~l 145 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGAL 145 (343)
T ss_pred eeeeccHHHHHHHHHhCCC
Confidence 6899999999999988653
No 307
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=29.29 E-value=94 Score=26.64 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=27.0
Q ss_pred CceEEEEeCCCCCCC-----hhHHHHHHHHHHcCcEEEEe
Q 043492 12 KYEVILFFPGTSVSN-----TSYSKLFDHLASHGYIVVSP 46 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~-----~~~~~l~~~Las~Gy~Vv~~ 46 (278)
+.|.|++.||..... +.|..+++.|.++|+.++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 467899999976432 47889999999888877754
No 308
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=29.27 E-value=1.9e+02 Score=27.82 Aligned_cols=62 Identities=18% Similarity=0.219 Sum_probs=43.5
Q ss_pred ceEEEEeCCCCC---CChhHHHHHHHHHHcCcEEEEeccCC--CCCCCCCchhhHHHHHHHHhhhhh
Q 043492 13 YEVILFFPGTSV---SNTSYSKLFDHLASHGYIVVSPQLYN--LMPPKGNKEVDAAAEEINWLPKGL 74 (278)
Q Consensus 13 ~Pvvv~~hG~~~---~~~~~~~l~~~Las~Gy~Vv~~d~~~--~~~~~~~~~~~~~~~~~~~l~~~l 74 (278)
...++++||..- ..+....+.+.|..+|..|-..-+++ ++.+........+.++++|+.+.+
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 345788999884 33466778899999999888877654 444444445667788888876644
No 309
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=29.12 E-value=1e+02 Score=25.18 Aligned_cols=36 Identities=22% Similarity=0.063 Sum_probs=26.1
Q ss_pred EEEEeCCCCCCC--hhHHHHHHHHHHcCcEEEEeccCC
Q 043492 15 VILFFPGTSVSN--TSYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 15 vvv~~hG~~~~~--~~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
+|.+..+=||.. ..-..++..|+.+|+.|+.+|...
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~ 40 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDP 40 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 455555444444 455778899999999999999743
No 310
>PF14246 TetR_C_7: AefR-like transcriptional repressor, C-terminal region; PDB: 3BHQ_B 3CDL_A.
Probab=29.10 E-value=42 Score=20.23 Aligned_cols=21 Identities=24% Similarity=0.407 Sum_probs=16.7
Q ss_pred CCchhHHHHhhHHHHHHHHHH
Q 043492 225 LPRQPMRQCVSGIAVAFLKAY 245 (278)
Q Consensus 225 ~~~~~~~~~~~~~~~afl~~~ 245 (278)
.+.++..+.+...+..||++|
T Consensus 35 ~s~~e~~~~v~~aV~~FL~aY 55 (55)
T PF14246_consen 35 PSAEEIERIVESAVDMFLRAY 55 (55)
T ss_dssp --HHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhhC
Confidence 457888899999999999887
No 311
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=28.50 E-value=1.5e+02 Score=23.51 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=26.8
Q ss_pred ceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEecc
Q 043492 13 YEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
..+|.+..+-++... .-..++..|+..|+.|+.+|.
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 446666655555444 457789999999999999996
No 312
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=28.02 E-value=71 Score=21.97 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=20.7
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcE-EEEec
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYI-VVSPQ 47 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~-Vv~~d 47 (278)
+..++||++.++..+ ...+..|...||. |..++
T Consensus 60 ~~~~ivvyC~~G~rs----~~a~~~L~~~G~~~v~~l~ 93 (101)
T cd01518 60 KGKKVLMYCTGGIRC----EKASAYLKERGFKNVYQLK 93 (101)
T ss_pred CCCEEEEECCCchhH----HHHHHHHHHhCCcceeeec
Confidence 446788888764332 2345677888995 65554
No 313
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=27.87 E-value=34 Score=25.67 Aligned_cols=32 Identities=22% Similarity=0.167 Sum_probs=23.9
Q ss_pred EeCCCCCCChhHHHHHHHHHHcCcEEEEeccC
Q 043492 18 FFPGTSVSNTSYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 18 ~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
+.++.||.......+++.|+++|+.|..+-..
T Consensus 7 ~~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 7 FLPNIGGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp -TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred cCCCCChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 34556666677889999999999999998543
No 314
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=27.61 E-value=1.3e+02 Score=24.65 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=24.8
Q ss_pred CCCceEEEEeCCCCCCCh-hHHHHHHHHHHcCc-EEEE
Q 043492 10 QGKYEVILFFPGTSVSNT-SYSKLFDHLASHGY-IVVS 45 (278)
Q Consensus 10 ~~~~Pvvv~~hG~~~~~~-~~~~l~~~Las~Gy-~Vv~ 45 (278)
.+.--+|++.||...... .|.-+-..|-.+|| .|++
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v 172 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFV 172 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEE
Confidence 345569999999986654 55555566788888 4443
No 315
>TIGR03586 PseI pseudaminic acid synthase.
Probab=27.40 E-value=4.3e+02 Score=23.19 Aligned_cols=78 Identities=17% Similarity=0.075 Sum_probs=44.6
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCc-EEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEE
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGY-IVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMG 93 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy-~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~G 93 (278)
.|+++-|. .+-..+...++.+.+.|. .|+... --+.++. .....++ ..+..|.+. .+ -.||+..
T Consensus 136 PvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh-C~s~YP~-~~~~~nL-~~i~~lk~~----------f~-~pVG~SD 200 (327)
T TIGR03586 136 PIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK-CTSSYPA-PLEDANL-RTIPDLAER----------FN-VPVGLSD 200 (327)
T ss_pred cEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe-cCCCCCC-CcccCCH-HHHHHHHHH----------hC-CCEEeeC
Confidence 56689998 577788888999999887 344433 2222322 1111112 223332221 11 2788999
Q ss_pred eChhHHHHHHHHhh
Q 043492 94 HSRGGLTAFALAQG 107 (278)
Q Consensus 94 hS~GG~~a~~~a~~ 107 (278)
||.|=.+++.+...
T Consensus 201 Ht~G~~~~~aAva~ 214 (327)
T TIGR03586 201 HTLGILAPVAAVAL 214 (327)
T ss_pred CCCchHHHHHHHHc
Confidence 99996555555443
No 316
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=26.99 E-value=48 Score=24.22 Aligned_cols=36 Identities=17% Similarity=0.089 Sum_probs=27.2
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCC
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
++|...|..|+-.=+-.+++.|.++|+.|...-+.+
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~ 36 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPD 36 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence 466777777777778899999999999997655443
No 317
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=26.91 E-value=85 Score=25.65 Aligned_cols=35 Identities=23% Similarity=0.138 Sum_probs=24.8
Q ss_pred EEEEeCCCCCCC--hhHHHHHHHHHHcCcEEEEeccC
Q 043492 15 VILFFPGTSVSN--TSYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 15 vvv~~hG~~~~~--~~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
+|.++.+=||.. ..-..++..|+++|+.|+.+|..
T Consensus 2 ii~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D 38 (251)
T TIGR01969 2 IITIASGKGGTGKTTITANLGVALAKLGKKVLALDAD 38 (251)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 344444444444 44566899999999999999973
No 318
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=26.81 E-value=3.4e+02 Score=23.78 Aligned_cols=79 Identities=11% Similarity=-0.010 Sum_probs=45.5
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcE---EEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYI---VVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~---Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
.||++-|. .+-..+..-++.+.++|.. ++.+ |-.+.+|.... ..+ ...+..|.+. .+ -.|++
T Consensus 135 PvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~ll-hC~s~YP~~~~-~~n-L~~I~~Lk~~----------f~-~pVG~ 199 (329)
T TIGR03569 135 PVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLL-HCTTEYPAPFE-DVN-LNAMDTLKEA----------FD-LPVGY 199 (329)
T ss_pred cEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEE-EECCCCCCCcc-cCC-HHHHHHHHHH----------hC-CCEEE
Confidence 48889998 5777888889999998874 3332 22222222111 111 1233333221 11 27899
Q ss_pred EEeChhHHHHHHHHhhC
Q 043492 92 MGHSRGGLTAFALAQGY 108 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~~~ 108 (278)
.+||.|-.+++.+....
T Consensus 200 SdHt~G~~~~~aAvalG 216 (329)
T TIGR03569 200 SDHTLGIEAPIAAVALG 216 (329)
T ss_pred CCCCccHHHHHHHHHcC
Confidence 99999976665555443
No 319
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=26.75 E-value=1.7e+02 Score=24.68 Aligned_cols=45 Identities=18% Similarity=0.352 Sum_probs=36.6
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHH-cCcEEEEeccCCCCCCC
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLAS-HGYIVVSPQLYNLMPPK 55 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las-~Gy~Vv~~d~~~~~~~~ 55 (278)
+++.+|+|.-|-+.-+..+....+.++. +|+.|+.++..|.+.++
T Consensus 150 ~~~gL~fFy~~~C~~C~~~apil~~fa~~ygi~v~~VS~DG~~~p~ 195 (256)
T TIGR02739 150 QSYGLFFFYRGKSPISQKMAPVIQAFAKEYGISVIPISVDGTLIPG 195 (256)
T ss_pred hceeEEEEECCCCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCC
Confidence 4577899999888888888888888887 49999999988775544
No 320
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.
Probab=26.41 E-value=1.7e+02 Score=19.64 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=21.1
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcE-EEEe
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYI-VVSP 46 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~-Vv~~ 46 (278)
..|+||+++++. +..-...+..|.+.||. |..+
T Consensus 50 ~~~ivl~c~~G~--~~~s~~aa~~L~~~G~~~v~~l 83 (92)
T cd01532 50 DTPIVVYGEGGG--EDLAPRAARRLSELGYTDVALL 83 (92)
T ss_pred CCeEEEEeCCCC--chHHHHHHHHHHHcCccCEEEc
Confidence 568888887632 22234567788889985 4433
No 321
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=26.26 E-value=3.3e+02 Score=23.53 Aligned_cols=63 Identities=17% Similarity=0.219 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEEEEeChhHHHHHHHHh
Q 043492 27 TSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSALMGHSRGGLTAFALAQ 106 (278)
Q Consensus 27 ~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l~GhS~GG~~a~~~a~ 106 (278)
..+..|++.|...- +.++++ | ++..... -.-+++.|.+. +..-=.++|-|+|+.++..++.
T Consensus 2 ~d~~rl~r~l~~~~-~gLvL~--G----GG~RG~a-hiGvL~aLee~-----------gi~~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 2 SDFSRLARVLTGNS-IALVLG--G----GGARGCA-HIGVIKALEEA-----------GIPVDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred ChHHHHHHHhcCCC-EEEEEC--C----hHHHHHH-HHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHc
Confidence 35778899888883 445544 1 1111111 12244444321 1112378899999999999987
Q ss_pred hC
Q 043492 107 GY 108 (278)
Q Consensus 107 ~~ 108 (278)
..
T Consensus 63 g~ 64 (306)
T cd07225 63 ER 64 (306)
T ss_pred CC
Confidence 64
No 322
>PRK03846 adenylylsulfate kinase; Provisional
Probab=26.26 E-value=1.3e+02 Score=23.75 Aligned_cols=36 Identities=28% Similarity=0.265 Sum_probs=26.0
Q ss_pred CceEEEEeCCCCCCChh--HHHHHHHHHHcCcEEEEec
Q 043492 12 KYEVILFFPGTSVSNTS--YSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~--~~~l~~~Las~Gy~Vv~~d 47 (278)
..|.+|++.|..|+..+ -..+++.|...|+.++.+|
T Consensus 22 ~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 22 HKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 56789999998887764 4556666666777677766
No 323
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=25.96 E-value=3e+02 Score=20.93 Aligned_cols=73 Identities=16% Similarity=0.187 Sum_probs=49.4
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceEE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSAL 91 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~l 91 (278)
+..+++---|..+....-.-+++.|++.||.|+..-+... + .++++.. +. -|.+-|++
T Consensus 12 rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~t--------p---~e~v~aA---~~--------~dv~vIgv 69 (143)
T COG2185 12 RPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQT--------P---EEAVRAA---VE--------EDVDVIGV 69 (143)
T ss_pred CceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCC--------H---HHHHHHH---Hh--------cCCCEEEE
Confidence 3446777888888888889999999999999998543211 1 2222221 11 16678899
Q ss_pred EEeChhHHHHHHHHh
Q 043492 92 MGHSRGGLTAFALAQ 106 (278)
Q Consensus 92 ~GhS~GG~~a~~~a~ 106 (278)
.+.|.|...-+.-..
T Consensus 70 Ssl~g~h~~l~~~lv 84 (143)
T COG2185 70 SSLDGGHLTLVPGLV 84 (143)
T ss_pred EeccchHHHHHHHHH
Confidence 999888776655543
No 324
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=25.68 E-value=78 Score=24.26 Aligned_cols=34 Identities=26% Similarity=0.135 Sum_probs=24.1
Q ss_pred EEEeCCCCCCC--hhHHHHHHHHHHcCcEEEEeccC
Q 043492 16 ILFFPGTSVSN--TSYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 16 vv~~hG~~~~~--~~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
|.+..+=||.. ..-..++..|++.|+.|+.+|..
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D 37 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDAD 37 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCC
Confidence 34444444443 34577899999999999999963
No 325
>PRK00889 adenylylsulfate kinase; Provisional
Probab=25.68 E-value=1.7e+02 Score=22.48 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=25.5
Q ss_pred eEEEEeCCCCCCChh--HHHHHHHHHHcCcEEEEecc
Q 043492 14 EVILFFPGTSVSNTS--YSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~--~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+-+|++.|..|+.++ -..++..|...|+.|..+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 458888899988764 35566777777877777764
No 326
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=24.93 E-value=87 Score=24.41 Aligned_cols=32 Identities=22% Similarity=0.187 Sum_probs=23.9
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccC
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
+|.+.|..|+..+ .+++.|++.|+.|+..|-.
T Consensus 1 ii~itG~~gsGKs--t~~~~l~~~g~~~i~~D~~ 32 (179)
T cd02022 1 IIGLTGGIGSGKS--TVAKLLKELGIPVIDADKI 32 (179)
T ss_pred CEEEECCCCCCHH--HHHHHHHHCCCCEEecCHH
Confidence 3566777776654 6778888899999988853
No 327
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=24.92 E-value=2.2e+02 Score=22.40 Aligned_cols=37 Identities=14% Similarity=0.124 Sum_probs=25.2
Q ss_pred CceEEEEe--CCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 12 KYEVILFF--PGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 12 ~~Pvvv~~--hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+.|+++.- |...........-.+.|.+.|+.|+-|+.
T Consensus 112 ~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 112 ETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 44555443 23334555667778889999999998875
No 328
>COG0400 Predicted esterase [General function prediction only]
Probab=24.88 E-value=3.6e+02 Score=21.82 Aligned_cols=57 Identities=18% Similarity=0.062 Sum_probs=41.5
Q ss_pred CCceEEEEeCCCCC---CChhHHHHHHHHHHcCcEEEEeccC-CCCCCCCCchhhHHHHHHHHhhh
Q 043492 11 GKYEVILFFPGTSV---SNTSYSKLFDHLASHGYIVVSPQLY-NLMPPKGNKEVDAAAEEINWLPK 72 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~---~~~~~~~l~~~Las~Gy~Vv~~d~~-~~~~~~~~~~~~~~~~~~~~l~~ 72 (278)
.+...|+++||..- ....-..+.+.|.+.|..|-.-++. |+ .-....+..+.+|+.+
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH-----~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGH-----EIPPEELEAARSWLAN 204 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCC-----cCCHHHHHHHHHHHHh
Confidence 35668999999884 3456678889999999999998875 33 3344567777778643
No 329
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.83 E-value=4.4e+02 Score=23.40 Aligned_cols=86 Identities=13% Similarity=0.075 Sum_probs=50.8
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCC--CCCCCC--chhhHHHHHHHHhhhhhhhcCCccccCCCC
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNL--MPPKGN--KEVDAAAEEINWLPKGLQSHLPENVVADLN 87 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~--~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~ 87 (278)
..|+|+++-..|........+..-..+.||.|+-+--+-. ..+... .........+..|.++ ...|..
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~--------~~~~~~ 109 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSD--------YNSDPC 109 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhh--------ccCCcC
Confidence 3467777766666666666777778888999988665432 111111 1122232333333221 125777
Q ss_pred ceEEEEeChhHHHHHHHH
Q 043492 88 YSALMGHSRGGLTAFALA 105 (278)
Q Consensus 88 ~i~l~GhS~GG~~a~~~a 105 (278)
++..-=+|+||.+.+..-
T Consensus 110 pi~fh~FS~ng~~~~~si 127 (350)
T KOG2521|consen 110 PIIFHVFSGNGVRLMYSI 127 (350)
T ss_pred ceEEEEecCCceeehHHH
Confidence 888889999998766544
No 330
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=24.72 E-value=1.7e+02 Score=26.21 Aligned_cols=39 Identities=18% Similarity=0.123 Sum_probs=28.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCC
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
+..+.+++-+..+.......+++.|+++||.|..+...+
T Consensus 3 ~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~ 41 (415)
T cd03816 3 RKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLE 41 (415)
T ss_pred ccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecC
Confidence 344666666666666666779999999999998876543
No 331
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=24.71 E-value=1.9e+02 Score=24.19 Aligned_cols=38 Identities=8% Similarity=-0.057 Sum_probs=28.7
Q ss_pred CCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEecc
Q 043492 11 GKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
++..+|.+.-+-+|... .-..++..||..|..|+.+|.
T Consensus 101 ~~~~vi~vts~~~g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 101 EGRKALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 34557777777666554 346788999999999999996
No 332
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=24.68 E-value=76 Score=21.43 Aligned_cols=21 Identities=29% Similarity=0.373 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHcCcEEEEecc
Q 043492 28 SYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 28 ~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
..+.+.+.|.+.||.|+-++.
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CchHHHHHHHHCCCEEEecCC
Confidence 456889999999999999884
No 333
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=24.43 E-value=4.5e+02 Score=22.50 Aligned_cols=90 Identities=14% Similarity=0.120 Sum_probs=52.3
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCceE
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNYSA 90 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~i~ 90 (278)
+-.-+||++.|+... .-..+.+...++|..++.|+..|.-.+...... .+ .. ......+|+
T Consensus 87 Gvk~avIis~Gf~e~--~~~~l~~~a~~~girilGPNc~Giin~~~~~~~-------~~-~~---------~~~~~G~Va 147 (286)
T TIGR01019 87 GIELIVCITEGIPVH--DMLKVKRYMEESGTRLIGPNCPGIITPGECKIG-------IM-PG---------HIHKPGNVG 147 (286)
T ss_pred CCCEEEEECCCCCHH--HHHHHHHHHHHcCCEEECCCCceEEccccccee-------ec-cc---------cCCCCCcEE
Confidence 445578999998543 335677777788999999998886443311000 00 00 002356899
Q ss_pred EEEeChhHHHHH-HHHhhCCCCCCCCcccceEEecC
Q 043492 91 LMGHSRGGLTAF-ALAQGYATNPPLGLKFSALVGVD 125 (278)
Q Consensus 91 l~GhS~GG~~a~-~~a~~~~~~~~~~~~~~a~v~~~ 125 (278)
++.+|-+=..++ ..+.... +.++.++.+-
T Consensus 148 liSQSG~l~~~~~~~a~~~g------iG~S~~Vs~G 177 (286)
T TIGR01019 148 IVSRSGTLTYEAVHQLTKAG------FGQSTCVGIG 177 (286)
T ss_pred EEeccHHHHHHHHHHHHHcC------CCeEEEEEeC
Confidence 998886533333 3333332 3567777644
No 334
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=24.14 E-value=1.6e+02 Score=24.09 Aligned_cols=35 Identities=26% Similarity=0.163 Sum_probs=26.1
Q ss_pred EEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccC
Q 043492 15 VILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 15 vvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
+|.+..+-||..+ .-..++..|+++|+.|+.+|..
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D 39 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDAD 39 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 5556665555554 4567889999999999999973
No 335
>PRK06696 uridine kinase; Validated
Probab=24.12 E-value=1.6e+02 Score=23.78 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=26.8
Q ss_pred CCceEEEEeCCCCCCChhH--HHHHHHHHHcCcEEEEe
Q 043492 11 GKYEVILFFPGTSVSNTSY--SKLFDHLASHGYIVVSP 46 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~--~~l~~~Las~Gy~Vv~~ 46 (278)
.+.|.||.+.|..++.++. ..+++.|...|..|+.+
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~ 56 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRA 56 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEe
Confidence 4568999999999887653 56677777778777763
No 336
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=23.98 E-value=1.3e+02 Score=28.08 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=34.2
Q ss_pred CCceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCC
Q 043492 11 GKYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
.+.|+||.+.|+.++.. ....+.+.|-.+|+.|.++..+.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 56899999999997765 56889999999999999988654
No 337
>PRK06091 membrane protein FdrA; Validated
Probab=23.75 E-value=6.4e+02 Score=23.99 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=0.0
Q ss_pred CCCCceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCCchhhHHHHHHHHhhhhhhhcCCccccCCCCc
Q 043492 9 NQGKYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGNKEVDAAAEEINWLPKGLQSHLPENVVADLNY 88 (278)
Q Consensus 9 ~~~~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~~~ 88 (278)
..+ ..++||+.|+ ....-..+.+.-.++|..|+.||. |........ +.....+...+
T Consensus 139 ~~G-~~viI~S~gf--g~~~E~~L~e~Ar~~GlrvmGPNC-G~~~i~gl~-------------------lsF~~~~~~G~ 195 (555)
T PRK06091 139 DRN-LNVMMFSDNV--TLEDEIRLKTRAREKGLLVMGPDC-GTAMIAGTP-------------------LAFANVMPEGN 195 (555)
T ss_pred HcC-CeEEEEcCCC--CHHHHHHHHHHHHHcCCEEECCCC-hhhhhcCCc-------------------ccccCCCCCCC
Q ss_pred eEEEEeChhHHHHHHHHhhCCCCCCCCcccceEEec
Q 043492 89 SALMGHSRGGLTAFALAQGYATNPPLGLKFSALVGV 124 (278)
Q Consensus 89 i~l~GhS~GG~~a~~~a~~~~~~~~~~~~~~a~v~~ 124 (278)
|+++++|-++...+........ +-++.++.+
T Consensus 196 IgiVSQSGtl~~~v~~~a~~~G-----iG~S~~Vs~ 226 (555)
T PRK06091 196 IGVIGASGTGIQELCSQIALAG-----EGITHAIGL 226 (555)
T ss_pred EEEEeCcHHHHHHHHHHHHHcC-----CCeEEEEEC
No 338
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=23.61 E-value=68 Score=28.81 Aligned_cols=39 Identities=15% Similarity=-0.068 Sum_probs=27.2
Q ss_pred ceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEecc-CCC
Q 043492 13 YEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQL-YNL 51 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~-~~~ 51 (278)
..+|.+...=||..+ .-..++..||.+||.|+++|. ...
T Consensus 106 ~~vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ 147 (387)
T PHA02519 106 PVVLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQ 147 (387)
T ss_pred ceEEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 345555554444443 457788999999999999995 443
No 339
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=23.51 E-value=18 Score=14.10 Aligned_cols=6 Identities=67% Similarity=1.093 Sum_probs=2.8
Q ss_pred EeChhH
Q 043492 93 GHSRGG 98 (278)
Q Consensus 93 GhS~GG 98 (278)
|+++||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 344544
No 340
>PLN02200 adenylate kinase family protein
Probab=23.50 E-value=1.6e+02 Score=24.25 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=25.1
Q ss_pred CCceEEEEeCCCCCCChhHHHHHHHHHHc-CcEEEEe
Q 043492 11 GKYEVILFFPGTSVSNTSYSKLFDHLASH-GYIVVSP 46 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~ 46 (278)
.+.|.+|++.|..|+... .+++.|+++ |+..+..
T Consensus 40 ~~~~~ii~I~G~PGSGKs--T~a~~La~~~g~~his~ 74 (234)
T PLN02200 40 EKTPFITFVLGGPGSGKG--TQCEKIVETFGFKHLSA 74 (234)
T ss_pred CCCCEEEEEECCCCCCHH--HHHHHHHHHhCCeEEEc
Confidence 356889999999988765 566666665 7777765
No 341
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional
Probab=23.46 E-value=3.8e+02 Score=24.10 Aligned_cols=78 Identities=15% Similarity=0.162 Sum_probs=44.5
Q ss_pred ceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCC------------CCCCCchhhHHHHHHHHhhhhhhhcCCc
Q 043492 13 YEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLM------------PPKGNKEVDAAAEEINWLPKGLQSHLPE 80 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~------------~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 80 (278)
..++|+=.|+. | .+.+.|.+.|+.|..+...-.- .+++...+.+....++.+ ++++.
T Consensus 193 ~~I~viD~g~k-----~-ni~~~L~~~G~~v~vvp~~~~~~~i~~~~~dgIilSgGPg~p~~~~~~i~~i----~~~~~- 261 (382)
T CHL00197 193 LKIIVIDFGVK-----Y-NILRRLKSFGCSITVVPATSPYQDILSYQPDGILLSNGPGDPSAIHYGIKTV----KKLLK- 261 (382)
T ss_pred CEEEEEECCcH-----H-HHHHHHHHCCCeEEEEcCCCCHHHHhccCCCEEEEcCCCCChhHHHHHHHHH----HHHHh-
Confidence 45666666533 2 4889999999998887432110 011223333333333332 22221
Q ss_pred cccCCCCceEEEEeChhHHHHHHHHhh
Q 043492 81 NVVADLNYSALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 81 ~~~~d~~~i~l~GhS~GG~~a~~~a~~ 107 (278)
.++=++|.++|-.+...+.+.
T Consensus 262 ------~~~PilGIClGhQlLa~a~Gg 282 (382)
T CHL00197 262 ------YNIPIFGICMGHQILSLALEA 282 (382)
T ss_pred ------CCCCEEEEcHHHHHHHHHhCC
Confidence 256799999999887777654
No 342
>PRK06762 hypothetical protein; Provisional
Probab=23.35 E-value=1e+02 Score=23.41 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=21.4
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHc---CcEEEEecc
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASH---GYIVVSPQL 48 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~---Gy~Vv~~d~ 48 (278)
|.+|++.|..|+.++ .+++.|+++ |+.++..|.
T Consensus 2 ~~li~i~G~~GsGKS--T~A~~L~~~l~~~~~~i~~D~ 37 (166)
T PRK06762 2 TTLIIIRGNSGSGKT--TIAKQLQERLGRGTLLVSQDV 37 (166)
T ss_pred CeEEEEECCCCCCHH--HHHHHHHHHhCCCeEEecHHH
Confidence 567888898888774 555666554 455555443
No 343
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=23.34 E-value=1.5e+02 Score=26.07 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=25.0
Q ss_pred ceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEecc
Q 043492 13 YEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 13 ~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
..+|.++ |-+|... .-..++..|+.+|+.|+.+|.
T Consensus 31 ~~ii~v~-gkgG~GKSt~a~nLa~~la~~g~rVllid~ 67 (329)
T cd02033 31 TQIIAIY-GKGGIGKSFTLANLSYMMAQQGKRVLLIGC 67 (329)
T ss_pred CeEEEEE-CCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 3344444 6666554 346788999999999999886
No 344
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=23.30 E-value=1.6e+02 Score=24.65 Aligned_cols=33 Identities=24% Similarity=0.199 Sum_probs=26.2
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEec
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d 47 (278)
.|+++-|-|.+...=..++++|..+||.|.++-
T Consensus 62 ~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 466666777777777789999999999988765
No 345
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=22.96 E-value=1.1e+02 Score=25.86 Aligned_cols=35 Identities=14% Similarity=0.011 Sum_probs=25.9
Q ss_pred EEEEeCCC-----CCCChhHHHHHHHHHHcCcEEEEeccC
Q 043492 15 VILFFPGT-----SVSNTSYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 15 vvv~~hG~-----~~~~~~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
+++++|.+ +|.......+++.|+++|+.|..+...
T Consensus 2 Il~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~ 41 (359)
T cd03823 2 ILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAG 41 (359)
T ss_pred eeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCC
Confidence 46666666 344456678999999999999887653
No 346
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=22.93 E-value=1.2e+02 Score=25.23 Aligned_cols=34 Identities=24% Similarity=0.173 Sum_probs=24.6
Q ss_pred EEEeCCCCCCC--hhHHHHHHHHHHcCcEEEEeccCC
Q 043492 16 ILFFPGTSVSN--TSYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 16 vv~~hG~~~~~--~~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
|.++ |=||.. ..-..++..|++.|+.|+.+|...
T Consensus 4 iav~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dp 39 (270)
T cd02040 4 IAIY-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDP 39 (270)
T ss_pred EEEE-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 4444 444444 455788999999999999999743
No 347
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=22.76 E-value=1.1e+02 Score=26.71 Aligned_cols=27 Identities=15% Similarity=-0.108 Sum_probs=21.7
Q ss_pred CCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 22 TSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 22 ~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
.||.......+++.|++.|+.|..+-.
T Consensus 12 ~gG~e~~~~~la~~L~~~G~~V~v~~~ 38 (392)
T cd03805 12 IGGAERLVVDAALALQSRGHEVTIYTS 38 (392)
T ss_pred CchHHHHHHHHHHHHHhCCCeEEEEcC
Confidence 356666778999999999999988753
No 348
>COG2820 Udp Uridine phosphorylase [Nucleotide transport and metabolism]
Probab=22.62 E-value=1.7e+02 Score=24.33 Aligned_cols=32 Identities=16% Similarity=0.089 Sum_probs=25.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVS 45 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~ 45 (278)
..|+.|.+||.|+.+.. --.++|+.-|-.+++
T Consensus 57 g~~v~v~StGIGgPSaa--IAvEEL~~lGa~tfi 88 (248)
T COG2820 57 GKPVTVCSTGIGGPSAA--IAVEELARLGAKTFI 88 (248)
T ss_pred CeEEEEEecCCCCchHH--HHHHHHHhcCCeEEE
Confidence 56899999999987643 456889999988874
No 349
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=22.50 E-value=3.8e+02 Score=22.75 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=26.9
Q ss_pred EEeCCCCCCC-hhHHHHHHHHHHcCcEEEEeccCC
Q 043492 17 LFFPGTSVSN-TSYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 17 v~~hG~~~~~-~~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
|+++..+... ..+....+.|.++||.|+..++-.
T Consensus 3 iiapSs~~~~~~~~~~~~~~L~~~G~~v~~~~~~~ 37 (282)
T cd07025 3 IVAPSSPIDEEERLERAIARLESLGLEVVVGPHVL 37 (282)
T ss_pred EEeCCCCCCcHHHHHHHHHHHHhCCCEEEeccchh
Confidence 5566666666 788888999999999999988744
No 350
>PRK14734 coaE dephospho-CoA kinase; Provisional
Probab=22.25 E-value=1.4e+02 Score=23.83 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=24.7
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+|.+.|..|+..+ .+++.|+..|+.|+..|-
T Consensus 3 ~igitG~igsGKs--t~~~~l~~~g~~vid~D~ 33 (200)
T PRK14734 3 RIGLTGGIGSGKS--TVADLLSSEGFLIVDADQ 33 (200)
T ss_pred EEEEECCCCCCHH--HHHHHHHHCCCeEEeCcH
Confidence 5778887777665 788888899999988873
No 351
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=22.15 E-value=1.3e+02 Score=22.40 Aligned_cols=35 Identities=20% Similarity=0.071 Sum_probs=23.3
Q ss_pred EEEe-CCCCCCChhHHHHHHHHHHcCcEEEEeccCC
Q 043492 16 ILFF-PGTSVSNTSYSKLFDHLASHGYIVVSPQLYN 50 (278)
Q Consensus 16 vv~~-hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~ 50 (278)
.|++ -|..|....-..++..|++.|..|+.+|...
T Consensus 4 ~v~s~~~g~G~t~~a~~lA~~la~~~~~Vllid~~~ 39 (157)
T PF13614_consen 4 AVWSPKGGVGKTTLALNLAAALARKGKKVLLIDFDF 39 (157)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTT-EEEEE--S
T ss_pred EEECCCCCCCHHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 3455 3334555566889999999999999999743
No 352
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=22.11 E-value=3e+02 Score=20.53 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=23.1
Q ss_pred EEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccCCCC
Q 043492 16 ILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLYNLM 52 (278)
Q Consensus 16 vv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~~~~ 52 (278)
+|.+-|..++.. .-..++..|.++||.|.++=|.+++
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g 40 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHG 40 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCC
Confidence 344445554443 5688999999999999976665543
No 353
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.
Probab=22.05 E-value=1.9e+02 Score=19.48 Aligned_cols=32 Identities=16% Similarity=0.032 Sum_probs=19.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEec
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQ 47 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d 47 (278)
..++|+++.+... ....+..|...||.|..++
T Consensus 56 ~~~iv~~c~~G~r----s~~aa~~L~~~G~~v~~l~ 87 (95)
T cd01534 56 GARIVLADDDGVR----ADMTASWLAQMGWEVYVLE 87 (95)
T ss_pred CCeEEEECCCCCh----HHHHHHHHHHcCCEEEEec
Confidence 3567887765322 2345677888999854443
No 354
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=21.93 E-value=2.8e+02 Score=21.90 Aligned_cols=59 Identities=10% Similarity=0.114 Sum_probs=33.7
Q ss_pred CceEEEEeC--CCCCCChhHHHHHHHHHHcCcEEEEeccCCC--CCCCCCchhhHHHHHHHHhh
Q 043492 12 KYEVILFFP--GTSVSNTSYSKLFDHLASHGYIVVSPQLYNL--MPPKGNKEVDAAAEEINWLP 71 (278)
Q Consensus 12 ~~Pvvv~~h--G~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~--~~~~~~~~~~~~~~~~~~l~ 71 (278)
+.|+|++-- ........+..-.+.|.+.|+.|+-+.. |. ....+.....+.+++++++.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~~-g~la~~~~g~g~~~~~~~i~~~v~ 175 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPKE-GLLACGDEGYGALADIETILETIE 175 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCccCCCCCCHHHHHHHHH
Confidence 456665542 2233444566777889999999999884 22 11112333445566666543
No 355
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=21.89 E-value=64 Score=30.37 Aligned_cols=25 Identities=16% Similarity=0.226 Sum_probs=20.3
Q ss_pred CCCceEEEEeChhHHHHHHHHhhCC
Q 043492 85 DLNYSALMGHSRGGLTAFALAQGYA 109 (278)
Q Consensus 85 d~~~i~l~GhS~GG~~a~~~a~~~~ 109 (278)
....-+++|||+|=+.|+.+++...
T Consensus 263 GI~Pdav~GHSlGE~aAa~aAGvls 287 (538)
T TIGR02816 263 AIKPDFALGYSKGEASMWASLGVWK 287 (538)
T ss_pred CCCCCEEeecCHHHHHHHHHhCCCC
Confidence 3445599999999999999998653
No 356
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=21.72 E-value=1.1e+02 Score=26.47 Aligned_cols=34 Identities=21% Similarity=0.138 Sum_probs=27.8
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+++...|.+|.......+++.|.+.|+.|..+-.
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~ 37 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGT 37 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEEC
Confidence 5666677888777778999999999999988754
No 357
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=21.63 E-value=72 Score=25.91 Aligned_cols=17 Identities=29% Similarity=0.319 Sum_probs=14.2
Q ss_pred HHHHHHHcCcEEEEecc
Q 043492 32 LFDHLASHGYIVVSPQL 48 (278)
Q Consensus 32 l~~~Las~Gy~Vv~~d~ 48 (278)
-+..||++|+.|+++|.
T Consensus 48 da~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 48 DLAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHHhCCCeEEEEeC
Confidence 35668899999999995
No 358
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein.
Probab=21.59 E-value=1.8e+02 Score=24.89 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=24.7
Q ss_pred EEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEecc
Q 043492 15 VILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 15 vvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
+|.++ |=||..+ .-..++..||.+|+.|+.+|.
T Consensus 2 vIav~-gKGGvGKTT~a~nLA~~La~~g~rVLlID~ 36 (296)
T TIGR02016 2 IIAIY-GKGGSGKSFTTTNLSHMMAEMGKRVLQLGC 36 (296)
T ss_pred EEEEE-CCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 34444 5555444 457789999999999999997
No 359
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=21.42 E-value=1.5e+02 Score=26.25 Aligned_cols=35 Identities=17% Similarity=0.005 Sum_probs=30.8
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccC
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
++++..|..|+-.-+-.+++.|.++|+.|...-..
T Consensus 3 Il~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~ 37 (401)
T cd03784 3 VLITTIGSRGDVQPLVALAWALRAAGHEVRVATPP 37 (401)
T ss_pred EEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCH
Confidence 67888998888888999999999999999987654
No 360
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=21.41 E-value=1.7e+02 Score=20.87 Aligned_cols=22 Identities=18% Similarity=0.244 Sum_probs=19.1
Q ss_pred CChhHHHHHHHHHHcCcEEEEe
Q 043492 25 SNTSYSKLFDHLASHGYIVVSP 46 (278)
Q Consensus 25 ~~~~~~~l~~~Las~Gy~Vv~~ 46 (278)
.......+++.|.+.||.+++-
T Consensus 11 dk~~~~~~a~~l~~~G~~i~aT 32 (116)
T cd01423 11 SKPELLPTAQKLSKLGYKLYAT 32 (116)
T ss_pred cchhHHHHHHHHHHCCCEEEEc
Confidence 5667889999999999999883
No 361
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=21.37 E-value=2.1e+02 Score=23.09 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=24.5
Q ss_pred CCceEEEEeCCCCCCChh-H----HHHHHHHHHcCcEEEE
Q 043492 11 GKYEVILFFPGTSVSNTS-Y----SKLFDHLASHGYIVVS 45 (278)
Q Consensus 11 ~~~Pvvv~~hG~~~~~~~-~----~~l~~~Las~Gy~Vv~ 45 (278)
+-.+++|+.++..+.... | ..+++.|+.+|++|+.
T Consensus 13 ~~~~i~V~~gs~~~~~~~~~~~~a~~lg~~la~~g~~V~t 52 (205)
T COG1611 13 GIRQIVVICGSARGIEPEEYYELARELGRELAKRGLLVIT 52 (205)
T ss_pred CcceEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEe
Confidence 356788888887654443 4 4566778889977776
No 362
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=21.18 E-value=2.1e+02 Score=19.54 Aligned_cols=32 Identities=9% Similarity=0.032 Sum_probs=19.9
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcE-EEEec
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYI-VVSPQ 47 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~-Vv~~d 47 (278)
..++|+++++.. . ....+..|...||. |..++
T Consensus 65 ~~~vv~~c~~g~--~--s~~~a~~L~~~G~~~v~~l~ 97 (105)
T cd01525 65 GKIIVIVSHSHK--H--AALFAAFLVKCGVPRVCILD 97 (105)
T ss_pred CCeEEEEeCCCc--c--HHHHHHHHHHcCCCCEEEEe
Confidence 456777776543 2 23456678889995 55444
No 363
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=20.88 E-value=1.8e+02 Score=25.38 Aligned_cols=34 Identities=26% Similarity=0.460 Sum_probs=26.3
Q ss_pred ceEEEEeCCCCC-----CChhHHHHHHHHHHcCcEEEEe
Q 043492 13 YEVILFFPGTSV-----SNTSYSKLFDHLASHGYIVVSP 46 (278)
Q Consensus 13 ~Pvvv~~hG~~~-----~~~~~~~l~~~Las~Gy~Vv~~ 46 (278)
.+.|++.+|... ..+.|..+++.|.+.|+.|+.+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ 221 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLT 221 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 467888888763 3357899999999889988875
No 364
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=20.87 E-value=1.6e+02 Score=31.02 Aligned_cols=17 Identities=29% Similarity=0.503 Sum_probs=12.9
Q ss_pred CCCCceEEEEeChhHHH
Q 043492 84 ADLNYSALMGHSRGGLT 100 (278)
Q Consensus 84 ~d~~~i~l~GhS~GG~~ 100 (278)
++...=+++|||.|-..
T Consensus 579 lgi~PDGIvGHS~GElg 595 (2376)
T KOG1202|consen 579 LGIRPDGIVGHSLGELG 595 (2376)
T ss_pred cCCCCCcccccccchhc
Confidence 45666699999998643
No 365
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=20.83 E-value=78 Score=25.79 Aligned_cols=17 Identities=29% Similarity=0.233 Sum_probs=14.0
Q ss_pred HHHHHHHcCcEEEEecc
Q 043492 32 LFDHLASHGYIVVSPQL 48 (278)
Q Consensus 32 l~~~Las~Gy~Vv~~d~ 48 (278)
-+..||++||.|+++|.
T Consensus 51 da~~LA~~G~~V~avD~ 67 (218)
T PRK13255 51 DMLWLAEQGHEVLGVEL 67 (218)
T ss_pred hHHHHHhCCCeEEEEcc
Confidence 35567889999999995
No 366
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=20.76 E-value=1.3e+02 Score=25.11 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=24.2
Q ss_pred EEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEeccC
Q 043492 16 ILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQLY 49 (278)
Q Consensus 16 vv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~~ 49 (278)
|.++ |=||..+ .-..++..||.+|+.|+.+|..
T Consensus 3 i~v~-gKGGvGKTT~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 3 LAVY-GKGGIGKSTTSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred EEEe-cCCCCCHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 3444 5554444 4577899999999999999974
No 367
>PRK12467 peptide synthase; Provisional
Probab=20.58 E-value=3.2e+02 Score=32.92 Aligned_cols=85 Identities=15% Similarity=0.090 Sum_probs=49.7
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEEeccCCCCCCCCC-chh-hHHHHHHHHhhhhhhhcCCccccCCCCce
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQLYNLMPPKGN-KEV-DAAAEEINWLPKGLQSHLPENVVADLNYS 89 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~~~~~~~~~~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~d~~~i 89 (278)
..+.++..|...+....|..+...|... ..|+.+..++....... ... .-.....+. +.... .....
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~~~~~~~~~~~~y~~~----~~~~~------~~~p~ 3759 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGWQDTSLQAMAVQYADY----ILWQQ------AKGPY 3759 (3956)
T ss_pred cccceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccCCccchHHHHHHHHHH----HHHhc------cCCCe
Confidence 4567999999998888888888888653 55666554433211111 111 111112222 11111 12357
Q ss_pred EEEEeChhHHHHHHHHhh
Q 043492 90 ALMGHSRGGLTAFALAQG 107 (278)
Q Consensus 90 ~l~GhS~GG~~a~~~a~~ 107 (278)
.+.|+|+||.++..++..
T Consensus 3760 ~l~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3760 GLLGWSLGGTLARLVAEL 3777 (3956)
T ss_pred eeeeeecchHHHHHHHHH
Confidence 888999999999888764
No 368
>PRK00081 coaE dephospho-CoA kinase; Reviewed
Probab=20.56 E-value=1.8e+02 Score=22.96 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=24.3
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEecc
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSPQL 48 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~d~ 48 (278)
.+|.+-|..|+..+ .+++.|++.|+.|+..|.
T Consensus 3 ~~i~ltG~~gsGKs--t~~~~l~~~g~~~i~~D~ 34 (194)
T PRK00081 3 LIIGLTGGIGSGKS--TVANLFAELGAPVIDADA 34 (194)
T ss_pred eEEEEECCCCCCHH--HHHHHHHHcCCEEEEecH
Confidence 46777777776654 677788889999998885
No 369
>PRK05569 flavodoxin; Provisional
Probab=20.33 E-value=2.8e+02 Score=20.34 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=19.6
Q ss_pred CceEEEEeCCCCCCChhHHHHHHHHHHcCcEEEE
Q 043492 12 KYEVILFFPGTSVSNTSYSKLFDHLASHGYIVVS 45 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~ 45 (278)
..++++|..+..........+.+.|...|+.++.
T Consensus 83 ~K~v~~f~t~g~~~~~~~~~~~~~l~~~g~~~~~ 116 (141)
T PRK05569 83 NKKCILFGSYGWDNGEFMKLWKDRMKDYGFNVIG 116 (141)
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHCCCeEee
Confidence 3455555554333334455666777777887765
No 370
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=20.32 E-value=2.2e+02 Score=25.53 Aligned_cols=40 Identities=18% Similarity=-0.082 Sum_probs=28.6
Q ss_pred CceEEEEeCCCCCCCh--hHHHHHHHHHHcCcEEEEecc-CCC
Q 043492 12 KYEVILFFPGTSVSNT--SYSKLFDHLASHGYIVVSPQL-YNL 51 (278)
Q Consensus 12 ~~Pvvv~~hG~~~~~~--~~~~l~~~Las~Gy~Vv~~d~-~~~ 51 (278)
+..+|.+...=||..+ .-..++..||.+|+.|+.+|. ...
T Consensus 105 ~~~vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~~DpQ 147 (388)
T PRK13705 105 FPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQ 147 (388)
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcCCCCC
Confidence 3456666665555554 457788999999999999994 443
No 371
>PRK00131 aroK shikimate kinase; Reviewed
Probab=20.24 E-value=1.2e+02 Score=22.91 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=24.0
Q ss_pred eEEEEeCCCCCCChhHHHHHHHHHHc-CcEEEEecc
Q 043492 14 EVILFFPGTSVSNTSYSKLFDHLASH-GYIVVSPQL 48 (278)
Q Consensus 14 Pvvv~~hG~~~~~~~~~~l~~~Las~-Gy~Vv~~d~ 48 (278)
+.+|++.|..|+..+ .+++.|++. |+.++..|.
T Consensus 4 ~~~i~l~G~~GsGKs--tla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 4 GPNIVLIGFMGAGKS--TIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCeEEEEcCCCCCHH--HHHHHHHHHhCCCEEEChH
Confidence 468889998887765 567777775 777776664
No 372
>COG3911 Predicted ATPase [General function prediction only]
Probab=20.15 E-value=1.7e+02 Score=22.74 Aligned_cols=29 Identities=21% Similarity=0.378 Sum_probs=20.9
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHcCcEEEEe
Q 043492 16 ILFFPGTSVSNTSYSKLFDHLASHGYIVVSP 46 (278)
Q Consensus 16 vv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~ 46 (278)
++++.|..|..+ +.+...|+..||+++--
T Consensus 11 ~fIltGgpGaGK--TtLL~aLa~~Gfatvee 39 (183)
T COG3911 11 RFILTGGPGAGK--TTLLAALARAGFATVEE 39 (183)
T ss_pred EEEEeCCCCCcH--HHHHHHHHHcCceeecc
Confidence 555666555443 57889999999998863
No 373
>PRK01184 hypothetical protein; Provisional
Probab=20.02 E-value=1.5e+02 Score=22.94 Aligned_cols=30 Identities=20% Similarity=0.036 Sum_probs=23.4
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHcCcEEEEe
Q 043492 15 VILFFPGTSVSNTSYSKLFDHLASHGYIVVSP 46 (278)
Q Consensus 15 vvv~~hG~~~~~~~~~~l~~~Las~Gy~Vv~~ 46 (278)
.+|++.|..|+..+. +++.+...|+.++..
T Consensus 2 ~~i~l~G~~GsGKsT--~a~~~~~~g~~~i~~ 31 (184)
T PRK01184 2 KIIGVVGMPGSGKGE--FSKIAREMGIPVVVM 31 (184)
T ss_pred cEEEEECCCCCCHHH--HHHHHHHcCCcEEEh
Confidence 478899999988765 455566779999886
Done!