BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043493
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 77/104 (74%), Gaps = 3/104 (2%)
Query: 1 MPSE-STDRKLARAHNPI--STYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCK 57
MPSE S R++ + + S P E L CPRCEST+TKFCYYNNYN SQPRHFCK
Sbjct: 1 MPSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCK 60
Query: 58 SCRRYWTQGGTLRNIPVGGGTRKNSKRTRISSSSSSGAVVATAN 101
SCRRYWT GGTLR+IPVGG +RK+SKR+R SS+++ +VV + N
Sbjct: 61 SCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTSVVGSRN 104
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 62/78 (79%)
Query: 1 MPSESTDRKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCR 60
MPSE + R + YPPP + E LPCPRC ST+TKFCYYNNYNL+QPR++CKSCR
Sbjct: 1 MPSEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCR 60
Query: 61 RYWTQGGTLRNIPVGGGT 78
RYWTQGGTLR++PVGGGT
Sbjct: 61 RYWTQGGTLRDVPVGGGT 78
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 102/182 (56%), Gaps = 29/182 (15%)
Query: 27 ESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTR 86
E L CPRC+S +TKFCYYNNYNLSQPRHFCK+CRRYWT+GG LRNIPVGGGTRK++KR+
Sbjct: 31 EQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSG 90
Query: 87 ISSSSS--SGAVVATANSSSCSSAVTHDRVA-EPANPVSVLPCGNPEMGLITMTDVNLND 143
S SS+ + V + S +RV+ + NP +L GL
Sbjct: 91 SSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRML------YGL---------- 134
Query: 144 SVGVPGSGSYTTMLNMQIQGQNFLGLGGFHNHGYGIGSG-LEELELGFGTARSWDIPGTG 202
VG P S++++L +Q +GG Y GS L ++LG G+ R D T
Sbjct: 135 PVGDPNGASFSSLLASNMQ------MGGL---VYESGSRWLPGMDLGLGSVRRSDDTWTD 185
Query: 203 YA 204
A
Sbjct: 186 LA 187
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 8 RKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGG 67
R++A N + T P E LPCPRC+S++TKFCYYNNYN SQPRHFCK+CRRYWT GG
Sbjct: 10 RRIAMKPNGV-TVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGG 68
Query: 68 TLRNIPVGGGTRKNSKRTR 86
TLR++PVGGGTRK++KR+R
Sbjct: 69 TLRDVPVGGGTRKSAKRSR 87
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Query: 4 ESTDRKLARAHNPI----STYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSC 59
E+ D K RA I P P++ E+L CPRC+S +TKFCYYNNY++SQPR+FCK+C
Sbjct: 31 EARDPKQTRAMPQIGGSGERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKAC 90
Query: 60 RRYWTQGGTLRNIPVGGGTRKNSKRTRI 87
RRYWT GGTLRN+P+GGG RKN +R
Sbjct: 91 RRYWTHGGTLRNVPIGGGCRKNKHASRF 118
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 7/97 (7%)
Query: 7 DRKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQG 66
DR++ N I + +SL CPRC S +TKFCYYNNYNLSQPRHFCK+CRRYWT+G
Sbjct: 34 DRRMRAHQNNILNH-----HQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKG 88
Query: 67 GTLRNIPVGGGTR--KNSKRTRISSSSSSGAVVATAN 101
G LRN+PVGGG R K SK ++ SSSS+ T +
Sbjct: 89 GVLRNVPVGGGCRKAKRSKTKQVPSSSSADKPTTTQD 125
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 95/183 (51%), Gaps = 35/183 (19%)
Query: 23 PKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNS 82
P + L CPRC+S++TKFCYYNNYNL+QPRHFCK CRRYWTQGG LRN+PVGGG R+N+
Sbjct: 71 PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 130
Query: 83 KRTR---ISSSSSSGAVVATANSSSCSSAVTHDRVAEPANPVSVLPCGNPEMGLITMTDV 139
K+ + + SSSSS ++ N+ S SS P +P T
Sbjct: 131 KKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSP----------------TLY 174
Query: 140 NLNDSVGVPGSGSYTTMLNMQIQGQNFLGLGGFHNHGYGIGSGLEELELGFGTARSWDIP 199
NL G+ G N G +N + IGS L +LGF R+ P
Sbjct: 175 NLTQLGGI---------------GLNLAATNG-NNQAHQIGSSLMMSDLGFLHGRNTSTP 218
Query: 200 GTG 202
TG
Sbjct: 219 MTG 221
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 27 ESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTR 86
++L CPRC S +TKFCYYNNY+LSQPRHFCKSCRRYWT+GG LRN+P+GGG RK K +
Sbjct: 39 QNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIK 98
Query: 87 ISSSSSSGAVVATANSSSCSSAVTHDRVAEPANPVSVLPCGNPEMGLITMTDVNLNDSVG 146
+SS ++ +++ S + P + G + L M D+ L
Sbjct: 99 PNSSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAG---LSLNKMNDLQL----- 150
Query: 147 VPGSGSYTTMLNMQIQGQNFLGLGGFHNHGYGIGSGLEELELGFGTARSWDIPGTGYACT 206
+ N ++ + G N +GSGL +GFG + P TG+
Sbjct: 151 ---------LNNQEVLDLRPMMSSGRENTPVDVGSGLS--LMGFGDFNNNHSP-TGFTTA 198
Query: 207 GGGSGAATSGCNTWQMMNGD 226
G G S T +N D
Sbjct: 199 GASDGNLASSIETLSCLNQD 218
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 7 DRKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQG 66
D+K ++ PP++ +L CPRC+ST+TKFCYYNNY+L+QPR+FCKSCRRYWT+G
Sbjct: 35 DQKKPSPATAVTRPQPPEL--ALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKG 92
Query: 67 GTLRNIPVGGGTRKNSKRTRISSSS 91
GTLRNIPVGGG RKN + T ++ S
Sbjct: 93 GTLRNIPVGGGCRKNKRSTSSAARS 117
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 29 LPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNS-KRTRI 87
L CPRC+S +TKFCYYNNYNLSQPRHFCKSCRRYWT+GG LRN+PVGGG+RKN+ KR+
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTS 88
Query: 88 SSSSSSGAVVATANSSSCSSAVTHDRVAEPANPVSVLPCGNPEMGLITMTDVNLNDSVGV 147
SSSS+S ++ N + + D +P N S P +P L + D G+
Sbjct: 89 SSSSASSPSNSSQNKKTKNP----DPDPDPRN--SQKPDLDPTRMLYGFP-IGDQDVKGM 141
Query: 148 PGSGSYTTMLNMQIQGQNFLGLGGFHNHGY---GIGSGLEELELGFGTARSW 196
GS++++L +Q G G+ G+G GL E G W
Sbjct: 142 EIGGSFSSLLANNMQLGLGGGGIMLDGSGWDHPGMGLGLRRTEPGNNNNNPW 193
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 71/102 (69%), Gaps = 10/102 (9%)
Query: 16 PISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVG 75
P+S P +SL CPRC+ST+TKFCYYNNY+LSQPR+FCKSCRRYWT+GG LRNIP+G
Sbjct: 27 PLSATRPAPPEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIG 86
Query: 76 GGTRKNSKRTRISSSSSSGAVVATANSSSCSSAVTHDRVAEP 117
G RK+ + SSS++ ++ T + +THD + P
Sbjct: 87 GAYRKHKR-----SSSATKSLRTTPEPT-----MTHDGKSFP 118
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 51/58 (87%)
Query: 24 KVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKN 81
K T+ LPCPRC+S TKFCYYNNYN++QPRHFCK+C+RYWT GGT+RN+PVG G RKN
Sbjct: 105 KPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKN 162
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 48/57 (84%)
Query: 25 VTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKN 81
V E PCPRC S TKFCYYNNYN SQPRHFCK CRRYWT+GGTLRN+PVGGGTRK
Sbjct: 43 VGEGDPCPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKK 99
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 5/81 (6%)
Query: 17 ISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGG 76
I+ P P+ +L CPRC+ST+TKFCY+NNY+L+QPRHFCK+CRRYWT+GG+LRN+PVGG
Sbjct: 66 IAKVPLPEA--ALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGG 123
Query: 77 GTRKNSKRTRISSSSSSGAVV 97
G R+N KR++ S S S VV
Sbjct: 124 GFRRN-KRSK--SRSKSTVVV 141
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 23 PKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNS 82
P+ +++ CPRC ST+TKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRNIPVGGG+RKN
Sbjct: 47 PEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNK 106
Query: 83 KRTRISSSSSSGAVVATANSSSCSSAVTHDRVAEPANPVSVLPCGNPEMGLITMTDVNL 141
+ SS S+ +T ++ + H + + L NP+ T D+NL
Sbjct: 107 RSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQ--QGLTGQNPKFLETTQQDLNL 163
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 61/83 (73%)
Query: 4 ESTDRKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYW 63
+S + +A +H P + L CPRC+S++TKFCYYNNY+LSQPRHFCK+C+RYW
Sbjct: 2 QSKNMIVASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYW 61
Query: 64 TQGGTLRNIPVGGGTRKNSKRTR 86
T+GGTLRN+PVGG RKN + R
Sbjct: 62 TRGGTLRNVPVGGSYRKNKRVKR 84
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Query: 28 SLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTR 86
+L CPRCEST+TKFCY+NNY+L+QPRHFCK+CRRYWT+GG LRN+PVGGG R+N +RT+
Sbjct: 88 ALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRN-RRTK 145
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 52/57 (91%)
Query: 27 ESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSK 83
E+ CPRCES +TKFCYYNNY+LSQPR+FCKSCRRYWT+GGTLRN+PVGGG R+N +
Sbjct: 46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKR 102
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 29 LPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKN 81
LPCPRC S TKFCYYNNYN++QPRHFCK C+RYWT GGT+RN+PVG G RKN
Sbjct: 138 LPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKN 190
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 60/81 (74%), Gaps = 6/81 (7%)
Query: 24 KVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKN-- 81
K T+ LPCPRC S TKFCYYNNYN++QPRHFCK+C+RYWT GGT+R++P+G G RKN
Sbjct: 49 KPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKN 108
Query: 82 ----SKRTRISSSSSSGAVVA 98
S ++ S ++G V++
Sbjct: 109 NSPTSHYHHVTISETNGPVLS 129
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Query: 2 PSESTDRKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRR 61
PS + RA ++ PP +L CPRC+S +TKFCY+NNYNL+QPRHFCK+CRR
Sbjct: 70 PSSLNGQAAERARLAKNSQPP---EGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRR 126
Query: 62 YWTQGGTLRNIPVGGGTRK 80
YWT+GG LRN+PVGGG R+
Sbjct: 127 YWTRGGALRNVPVGGGCRR 145
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 51/63 (80%)
Query: 21 PPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRK 80
P P L CPRC+S +TKFCYYNNY+LSQPRH+CK+CRRYWT+GG LRN+P+GG TR
Sbjct: 33 PSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTRN 92
Query: 81 NSK 83
+K
Sbjct: 93 KNK 95
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 27 ESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSK 83
E + CPRC ST+TKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG +RKN +
Sbjct: 72 EKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKR 128
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 57/67 (85%), Gaps = 2/67 (2%)
Query: 17 ISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGG 76
++ P P+ +L CPRC+ST+TKFCY+NNY+L+QPRHFCK+CRRYWT+GG LR++PVGG
Sbjct: 85 LANIPLPET--ALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGG 142
Query: 77 GTRKNSK 83
G R+N +
Sbjct: 143 GCRRNKR 149
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 43/49 (87%), Positives = 47/49 (95%)
Query: 31 CPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTR 79
CPRCEST TKFCYYNNY+LSQPR+FCK+CRRYWT+GGTLRNIPVGGG R
Sbjct: 75 CPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 123
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Query: 31 CPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTRISSS 90
CPRC S++TKFCYYNNY+LSQPR+FCK CRRYWT+GG+LRNIPVGGG RK S R+R +S
Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRS-RSRQNSH 98
Query: 91 SSSG 94
G
Sbjct: 99 KRFG 102
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 50/53 (94%)
Query: 31 CPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSK 83
CPRC S++TKFCYYNNY+L+QPR+ CKSCRRYWT+GG+LRN+PVGGG+RKN K
Sbjct: 70 CPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 49/53 (92%)
Query: 29 LPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKN 81
+PCPRCES +TKFCYYNNYN++QPR+FC++C+RYWT GG++RN+PVG G RKN
Sbjct: 132 IPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 16 PISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVG 75
P+ P+ ++L CPRC S +TKFCYYNNY+L+QPR+FCK CRRYWT GG+LRNIPVG
Sbjct: 36 PVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVG 95
Query: 76 GGTRKNSKRTRISSSSSSGAVVATANSSSCSSAVTHDRVAEPANPVSVLPCGNPEMGLIT 135
GG + + ++++S S SS+ A P LP NP++G
Sbjct: 96 GGV----------RKNKRSSSNSSSSSPSSSSSSKKPLFANNNTPTPPLPHLNPKIGEAA 145
Query: 136 MTDVNLNDSVGVPGSGSYTTMLNMQIQGQNFLGLGGFHNHGYGIGSGLE 184
T V D G G+ + ++ + G+G HNH I L+
Sbjct: 146 ATKV--QDLTFSQGFGNAHEVKDLNLAFSQGFGIG--HNHHSSIPEFLQ 190
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 21 PPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRK 80
PPP S CPRC+S +TKFC+YNNY+ SQPR+FCK+CRRYWT GG LRNIPVGG RK
Sbjct: 20 PPP----SRVCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRK 75
Query: 81 NSKRTRISSSSSSGAV 96
KR ++ SS S V
Sbjct: 76 -PKRLKVDQSSISEMV 90
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Query: 31 CPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTRISSS 90
CPRC S++TKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGGG RK S+R + SSS
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRK-SRRPK-SSS 84
Query: 91 SSSGAVVATANS 102
++ TANS
Sbjct: 85 GNNTKTSLTANS 96
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 29 LPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKN 81
LPCPRC S TKFCYYNNYN++QPRHFC+ C+RYWT GG++R +PVG G RKN
Sbjct: 105 LPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKN 157
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 29 LPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTRI 87
+PCPRC+S TKFCY+NNYN++QPRHFCK C+RYWT GG LRN+PVG G RK+ R+
Sbjct: 62 IPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV 120
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 46/50 (92%)
Query: 27 ESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGG 76
E L CPRC ST+TKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG
Sbjct: 78 EKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 46/59 (77%)
Query: 29 LPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTRI 87
+ CPRC+S TKFCY+NNYN++QPRHFCK C RYWT GG LRN+PVG G RK+ R+
Sbjct: 58 IACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRV 116
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Query: 31 CPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTRISSS 90
C RC+S +TKFCYYNNY+ QPR+FCK+CRRYWT GG LRN+P+GG +R +KRTRI+
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSR--AKRTRINQP 84
Query: 91 SSSGAV 96
S + V
Sbjct: 85 SVAQMV 90
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 31 CPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTRISSS 90
C RC+S +TKFCYYNNY QPR+FCK+CRRYWT GG LRNIP+GG +R +KR R++
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSR--AKRARVNQP 84
Query: 91 SSSGAV 96
S + V
Sbjct: 85 SVARMV 90
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 15 NPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPV 74
N ++ PPP+V CPRC S T+F Y+NN SQPR+ CK+C R WT GG LRNIPV
Sbjct: 12 NEMNVMPPPRV-----CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPV 66
Query: 75 GGGTRKNSKRTRISSSSSSGAVVA 98
G K S +I SS S ++A
Sbjct: 67 TGICDK-SNLPKIDQSSVSQMILA 89
>sp|Q6DIB4|CT112_MOUSE Uncharacterized protein C20orf112 homolog OS=Mus musculus PE=2 SV=1
Length = 494
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 28/141 (19%)
Query: 4 ESTDRKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYW 63
E+ DR + PIS P K+ + ES S +F + + R + KSCRR
Sbjct: 259 ENLDRMV-----PISKQPKEKIQAII-----ESCSRQFPEFQERARKRIRTYLKSCRRMK 308
Query: 64 TQGGTL-------------RNIPVGG---GTRKNSKRTR--ISSSSSSGAVVATANSSSC 105
G + NI TRK +KR R I SS + S
Sbjct: 309 KNGMEMTRPTPPHLTSAMAENILAAACESETRKAAKRMRLEIYQSSQEEPIALDKQHSRD 368
Query: 106 SSAVTHDRVAEPANPVSVLPC 126
S+A+TH + PA+ S P
Sbjct: 369 STAITHSTYSLPASAYSQDPV 389
>sp|Q96MY1|CT112_HUMAN Uncharacterized protein C20orf112 OS=Homo sapiens GN=C20orf112 PE=1
SV=2
Length = 436
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 28/141 (19%)
Query: 4 ESTDRKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYW 63
E+ DR + PIS P K+ + ES S +F + + R + KSCRR
Sbjct: 200 ENLDRMV-----PISKQPKEKIQAII-----ESCSRQFPEFQERARKRIRTYLKSCRRMK 249
Query: 64 TQGGTL-------------RNIPVGG---GTRKNSKRTR--ISSSSSSGAVVATANSSSC 105
G + NI TRK +KR R I SS + S
Sbjct: 250 KNGMEMTRPTPPHLTSAMAENILAAACESETRKAAKRMRLEIYQSSQDEPIALDKQHSRD 309
Query: 106 SSAVTHDRVAEPANPVSVLPC 126
S+A+TH + PA+ S P
Sbjct: 310 SAAITHSTYSLPASSYSQDPV 330
>sp|Q5RFT9|CT112_PONAB Uncharacterized protein C20orf112 homolog OS=Pongo abelii PE=2 SV=1
Length = 436
Score = 34.7 bits (78), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 28/141 (19%)
Query: 4 ESTDRKLARAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYW 63
E+ DR + PIS P K+ + ES S +F + + R + KSCRR
Sbjct: 200 ENLDRMV-----PISKQPKEKIQAII-----ESCSRQFPEFQERARKRIRTYHKSCRRMK 249
Query: 64 TQGGTL-------------RNIPVGG---GTRKNSKRTR--ISSSSSSGAVVATANSSSC 105
G + NI TRK +KR R I SS + S
Sbjct: 250 KNGMEMTRPTPPHLTSAMAENILAAACESETRKAAKRMRLEIYQSSQDEPIALDKQHSRD 309
Query: 106 SSAVTHDRVAEPANPVSVLPC 126
S+A+TH + PA+ S P
Sbjct: 310 SAAITHSTYSLPASSYSQDPV 330
>sp|Q9RHG2|ARAA_MYCSM L-arabinose isomerase OS=Mycobacterium smegmatis GN=araA PE=3 SV=1
Length = 501
Score = 34.3 bits (77), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 54 HFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTRISSSSSSGAVVATANSSSCSSAVT-HD 112
H + C Q +L P+G G R++ R R +++ SG V+ + S V H
Sbjct: 350 HMLEVCPSIAGQTPSLEVHPLGIGNREDPVRLRFTAAPGSGVVLGICDMGSRFRLVANHV 409
Query: 113 RVAEPANPVSVLPCG 127
V EP+ P+ LP
Sbjct: 410 TVVEPSAPLPNLPVA 424
>sp|A0QT53|ARAA_MYCS2 L-arabinose isomerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=araA PE=3 SV=1
Length = 501
Score = 34.3 bits (77), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 54 HFCKSCRRYWTQGGTLRNIPVGGGTRKNSKRTRISSSSSSGAVVATANSSSCSSAVT-HD 112
H + C Q +L P+G G R++ R R +++ SG V+ + S V H
Sbjct: 350 HMLEVCPSIAGQTPSLEVHPLGIGNREDPVRLRFTAAPGSGVVLGICDMGSRFRLVANHV 409
Query: 113 RVAEPANPVSVLPCG 127
V EP+ P+ LP
Sbjct: 410 TVVEPSAPLPNLPVA 424
>sp|A6VSX4|PYRE_MARMS Orotate phosphoribosyltransferase OS=Marinomonas sp. (strain MWYL1)
GN=pyrE PE=3 SV=1
Length = 215
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 36 STSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTR-KNSKRTRISSSSSSG 94
+T+T Y+++N+ P F + + +GG+L P+ G + T ++
Sbjct: 78 ATTTAVALYDHHNVDTPYVFNRKEAKTHGEGGSLVGAPLAGNVMIIDDVITAGTAIREVM 137
Query: 95 AVVATANSSSCSSAVTHDRVAEPANPVSVLPCGNPEMGLITMTDVNLND 143
A++ AN+ + DR +S + + G+ ++ V+LND
Sbjct: 138 AIIQQANALPAGVLIALDRQERGQGELSAIQEVERDFGMPVISIVSLND 186
>sp|Q9M203|EXPB5_ARATH Expansin-B5 OS=Arabidopsis thaliana GN=EXPB5 PE=2 SV=2
Length = 264
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 60/161 (37%), Gaps = 14/161 (8%)
Query: 12 RAHNPISTYPPPKVTESLPCPRCESTSTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRN 71
+ +P+ T P KV S CP C S F +LS + F +R +G LRN
Sbjct: 91 KCDHPLCTKKPIKVMISDECPGCTKESVHF------DLSG-KAFGALAKR--GKGDQLRN 141
Query: 72 IPVGGGTRKNSKRTRISSSSSSGA--VVATANSSSCSSAVTHDRVAEPANPVSVLPCGNP 129
+ G + + KR + A V A AN S AV + V P G
Sbjct: 142 L---GELKVSYKRACCKHPKTMIAIHVDAGANPYYMSFAVKFANGDGNFACIEVQPAGGQ 198
Query: 130 EMGLITMTDVNLNDSVGVPGSGSYTTMLNMQIQGQNFLGLG 170
M + M S GVP G + L + G+ + G
Sbjct: 199 YMKMEEMRSAVWRLSPGVPLKGPFNIRLTSAVSGKKIIAKG 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,221,591
Number of Sequences: 539616
Number of extensions: 5082068
Number of successful extensions: 13272
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 12919
Number of HSP's gapped (non-prelim): 372
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)