BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043501
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0AD20|YOHK_SHIFL Inner membrane protein YohK OS=Shigella flexneri GN=yohK PE=3 SV=1
Length = 231
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 30 LVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKLR 89
L+G P + SILP+ +T +A+++ G +++A V+ G++GA F L+ +R
Sbjct: 112 LMGASPEIAASILPKSVTTPIAMAVGGSI-GGIPAISAVCVIFVGILGAVFGHTLLNAMR 170
Query: 90 FRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLICSVPAVRQSLLA 149
R ARG+A +++H LGTA + + + F ++A L GI SLI P + +LA
Sbjct: 171 IRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIA--PFLFPIILA 228
Query: 150 IAG 152
+ G
Sbjct: 229 VMG 231
>sp|P0AD19|YOHK_ECOLI Inner membrane protein YohK OS=Escherichia coli (strain K12)
GN=yohK PE=1 SV=1
Length = 231
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 30 LVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKLR 89
L+G P + SILP+ +T +A+++ G +++A V+ G++GA F L+ +R
Sbjct: 112 LMGASPEIAASILPKSVTTPIAMAVGGSI-GGIPAISAVCVIFVGILGAVFGHTLLNAMR 170
Query: 90 FRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLICSVPAVRQSLLA 149
R ARG+A +++H LGTA + + + F ++A L GI SLI P + +LA
Sbjct: 171 IRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIA--PFLFPIILA 228
Query: 150 IAG 152
+ G
Sbjct: 229 VMG 231
>sp|P39590|YWBG_BACSU Uncharacterized protein YwbG OS=Bacillus subtilis (strain 168)
GN=ywbG PE=3 SV=2
Length = 225
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 1 LVKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 60
++K++A EI ++V + + ++ STAL + + L L S++PR +T +A++ VS G
Sbjct: 82 VLKKYAVEIILNVAVGSCIAIISTALIAKWLHLGTGLIDSLVPRSVTTPIAMN-VSEMIG 140
Query: 61 ANSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA 110
++TA V++T L+G + R + IARG+ +SAHG GT+
Sbjct: 141 GMPAVTAVFVILTALLGTVIGPMVIRYFRIDNEIARGVLLGTSAHGAGTS 190
>sp|Q6GDQ8|CIDB_STAAR Holin-like protein CidB OS=Staphylococcus aureus (strain MRSA252)
GN=cidB PE=3 SV=1
Length = 229
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K + + IF SV+ + + L + G + V++LPR IT A+ + VS G
Sbjct: 86 IKDNVSIIFASVLTGVMLNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIE-VSHELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L RF IA+G+ +++H GTA + E+
Sbjct: 145 TDTMTVLFIITTGLIGSILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|P60640|CIDB_STAAW Holin-like protein CidB OS=Staphylococcus aureus (strain MW2)
GN=cidB PE=3 SV=1
Length = 229
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K + + IF SV+ + + L + G + V++LPR IT A+ + VS G
Sbjct: 86 IKDNVSIIFASVLTGVMLNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIE-VSHELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L RF IA+G+ +++H GTA + E+
Sbjct: 145 TDTMTVLFIITTGLIGSILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|Q6G6D4|CIDB_STAAS Holin-like protein CidB OS=Staphylococcus aureus (strain MSSA476)
GN=cidB PE=3 SV=1
Length = 229
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K + + IF SV+ + + L + G + V++LPR IT A+ + VS G
Sbjct: 86 IKDNVSIIFASVLTGVMLNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIE-VSHELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L RF IA+G+ +++H GTA + E+
Sbjct: 145 TDTMTVLFIITTGLIGSILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|P60638|CIDB_STAAN Holin-like protein CidB OS=Staphylococcus aureus (strain N315)
GN=cidB PE=3 SV=1
Length = 229
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K + + IF SV+ + + L + G + V++LPR IT A+ + VS G
Sbjct: 86 IKDNVSIIFASVLTGVMLNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIE-VSHELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L RF IA+G+ +++H GTA + E+
Sbjct: 145 TDTMTVLFIITTGLIGSILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|P60637|CIDB_STAAM Holin-like protein CidB OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=cidB PE=3 SV=1
Length = 229
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K + + IF SV+ + + L + G + V++LPR IT A+ + VS G
Sbjct: 86 IKDNVSIIFASVLTGVMLNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIE-VSHELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L RF IA+G+ +++H GTA + E+
Sbjct: 145 TDTMTVLFIITTGLIGSILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|Q5HD11|CIDB_STAAC Holin-like protein CidB OS=Staphylococcus aureus (strain COL)
GN=cidB PE=3 SV=1
Length = 229
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K + + IF SV+ + + L + G + V++LPR IT A+ + VS G
Sbjct: 86 IKDNVSIIFASVLTGVMLNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIE-VSHELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L RF IA+G+ +++H GTA + E+
Sbjct: 145 TDTMTVLFIITTGLIGSILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|P60639|CIDB_STAA8 Holin-like protein CidB OS=Staphylococcus aureus (strain NCTC 8325)
GN=cidB PE=1 SV=1
Length = 229
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K + + IF SV+ + + L + G + V++LPR IT A+ + VS G
Sbjct: 86 IKDNVSIIFASVLTGVMLNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIE-VSHELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L RF IA+G+ +++H GTA + E+
Sbjct: 145 TDTMTVLFIITTGLIGSILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|Q8CR39|CIDB_STAES Holin-like protein CidB OS=Staphylococcus epidermidis (strain ATCC
12228) GN=cidB PE=3 SV=1
Length = 229
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ IF SV+ + + ++ G V++LPR IT A+ + VS G
Sbjct: 86 IKKYLTIIFTSVLTGVVLNFVLVFTTLKIFGYSKDTIVTLLPRSITAAVGIE-VSQELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L F+ IARG+ +++H GTA + E+
Sbjct: 145 TDTITVLFIITTGLIGSILGSMLLRMGGFKSSIARGLTYGNASHAFGTAKALELDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|Q5HL71|CIDB_STAEQ Holin-like protein CidB OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=cidB PE=3 SV=1
Length = 229
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ IF SV+ + + ++ G V++LPR IT A+ + VS G
Sbjct: 86 IKKYLTIIFTSVLTGVVLNFVLVFTTLKIFGYSKDTIVTLLPRSITAAVGIE-VSQELGG 144
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++T ++ TGLIG+ L F+ IARG+ +++H GTA + E+
Sbjct: 145 TDTITVLFIITTGLIGSILGSMLLRMGGFKSSIARGLTYGNASHAFGTAKALELDIESGA 204
Query: 122 FCAIAYALTGIFGSLICSV 140
F +I LT + S++ V
Sbjct: 205 FSSIGMILTAVISSVLIPV 223
>sp|P42102|YXAC_BACSU Uncharacterized protein YxaC OS=Bacillus subtilis (strain 168)
GN=yxaC PE=3 SV=4
Length = 230
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 1 LVKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 60
++ +H I V++ + S + G++ L +SILP+ IT +A+ I + G
Sbjct: 85 IIVKHCVPILGGVLVGLCMGMISGLIFAEAFGIDHDLLLSILPKSITTPVAIQIAAGLGG 144
Query: 61 ANSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEAL 120
S+T V++ G G L LR R + +GIA S++H LGT+ A+
Sbjct: 145 V-PSMTVVFVMIAGFSGVILGPLFLKWLRIRSSLGQGIALGSASHALGTSKALEYGELAV 203
Query: 121 PFCAIAYALTGIFGSL 136
+++ L + GS
Sbjct: 204 SMSSVSMTLCAVLGSF 219
>sp|A9VTH6|LRGB_BACWK Antiholin-like protein LrgB OS=Bacillus weihenstephanensis (strain
KBAB4) GN=lrgB PE=3 SV=1
Length = 230
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVVVVYIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|Q6HAJ7|LRGB_BACHK Antiholin-like protein LrgB OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|Q630G4|LRGB_BACCZ Antiholin-like protein LrgB OS=Bacillus cereus (strain ZK / E33L)
GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|Q814J3|LRGB_BACCR Antiholin-like protein LrgB OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|B9ISZ3|LRGB_BACCQ Antiholin-like protein LrgB OS=Bacillus cereus (strain Q1) GN=lrgB
PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|B7HZC3|LRGB_BACC7 Antiholin-like protein LrgB OS=Bacillus cereus (strain AH187)
GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|B7HGA1|LRGB_BACC4 Antiholin-like protein LrgB OS=Bacillus cereus (strain B4264)
GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|C1ER33|LRGB_BACC3 Antiholin-like protein LrgB OS=Bacillus cereus (strain 03BB102)
GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|B7IRX1|LRGB_BACC2 Antiholin-like protein LrgB OS=Bacillus cereus (strain G9842)
GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|Q72X07|LRGB_BACC1 Antiholin-like protein LrgB OS=Bacillus cereus (strain ATCC 10987)
GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|B7JIF5|LRGB_BACC0 Antiholin-like protein LrgB OS=Bacillus cereus (strain AH820)
GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|Q81JL5|LRGB_BACAN Antiholin-like protein LrgB OS=Bacillus anthracis GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|C3LGP7|LRGB_BACAC Antiholin-like protein LrgB OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|C3P2J6|LRGB_BACAA Antiholin-like protein LrgB OS=Bacillus anthracis (strain A0248)
GN=lrgB PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++++ ++ S+ + + +GL+ ++ S+LP+ T A+AL I G
Sbjct: 87 LKKYWWQILSAIVVGSICSVIVVFIVAKAIGLDTAVMNSMLPQAATTAIALPISESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKEP 117
+ + AV+ V+ +GA F L R + PIA+G+A ++ H LG A + E
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKHPIAKGLALGTAGHALGVAVGIEMGEV 202
Query: 118 EA 119
EA
Sbjct: 203 EA 204
>sp|Q8CN53|LRGB_STAES Antiholin-like protein LrgB OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=lrgB PE=3 SV=1
Length = 233
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 1 LVKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 60
++KR+ +IF + + T+ +L L + S+LP+ T A+AL + G
Sbjct: 89 VLKRYWLQIFGGIAVGTIIALLLIYLVAITFQFGNQIIASMLPQAATTAIALPVSDGIGG 148
Query: 61 ANSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKE 116
+ AV+ VV +GA V+ + +PIARG+A +S H LG AA AKE
Sbjct: 149 VKELTSLAVILNAVVISALGAKIVKL----FKISNPIARGLALGTSGHTLGVAA--AKE 201
>sp|P94516|LRGB_BACSU Antiholin-like protein LrgB OS=Bacillus subtilis (strain 168)
GN=lrgB PE=3 SV=1
Length = 231
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I S+I ++ S+ L + + L+ ++ S+LP+ T A+AL + S G
Sbjct: 87 LKKYWWQIMASIIAGSICSVTIVYLLAKGIHLDSAVMKSMLPQAATTAIALPL-SKGIGG 145
Query: 62 NSSLTAAVVVVTGLI----GANFVQATLDKLRFRDPIARGIATASSAHGLGTA-ALSAKE 116
S +TA V+ +I GA F++ + ++PI++G+A +S H LG A + E
Sbjct: 146 ISDITAFAVIFNAVIVYALGALFLKV----FKVKNPISKGLALGTSGHALGVAVGIEMGE 201
Query: 117 PEA 119
EA
Sbjct: 202 VEA 204
>sp|A7GVI2|LRGB_BACCN Antiholin-like protein LrgB OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=lrgB PE=3 SV=1
Length = 230
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+K++ +I ++I+ ++ S+ + + + L+ ++ S+LP+ T A+AL + G
Sbjct: 87 LKKYWWQILSAIIVGSICSVVVVFIVAKAIHLDTAIMNSMLPQAATTAIALPLSESIGGI 146
Query: 62 NSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTA 110
+ + AV+ V+ +GA F L R ++PIA+G+A ++ H LG A
Sbjct: 147 PAITSFAVIFNAVIVYALGALF----LKTFRVKNPIAKGLALGTAGHALGVA 194
>sp|Q5HLG0|LRGB_STAEQ Antiholin-like protein LrgB OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=lrgB PE=3 SV=1
Length = 233
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 1 LVKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 60
++K++ +IF + + T+ +L L + S+LP+ T A+AL + G
Sbjct: 89 VLKKYWLQIFGGIAVGTIIALLLIYLVAITFQFGNQIIASMLPQAATTAIALPVSDGIGG 148
Query: 61 ANSSLTAAVV---VVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKE 116
+ AV+ VV +GA V+ + +PIARG+A +S H LG AA AKE
Sbjct: 149 VKELTSLAVILNAVVISALGAKIVKL----FKISNPIARGLALGTSGHTLGVAA--AKE 201
>sp|P60644|LRGB_STAAW Antiholin-like protein LrgB OS=Staphylococcus aureus (strain MW2)
GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|A8Z0M6|LRGB_STAAT Antiholin-like protein LrgB OS=Staphylococcus aureus (strain USA300
/ TCH1516) GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|Q6GCK9|LRGB_STAAS Antiholin-like protein LrgB OS=Staphylococcus aureus (strain
MSSA476) GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|Q6GK49|LRGB_STAAR Antiholin-like protein LrgB OS=Staphylococcus aureus (strain
MRSA252) GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|P60642|LRGB_STAAN Antiholin-like protein LrgB OS=Staphylococcus aureus (strain N315)
GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|P60641|LRGB_STAAM Antiholin-like protein LrgB OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|A6QDN7|LRGB_STAAE Antiholin-like protein LrgB OS=Staphylococcus aureus (strain
Newman) GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|Q5HJB3|LRGB_STAAC Antiholin-like protein LrgB OS=Staphylococcus aureus (strain COL)
GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|Q2YV65|LRGB_STAAB Antiholin-like protein LrgB OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|A5IPD2|LRGB_STAA9 Antiholin-like protein LrgB OS=Staphylococcus aureus (strain JH9)
GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|P60643|LRGB_STAA8 Antiholin-like protein LrgB OS=Staphylococcus aureus (strain NCTC
8325) GN=lrgB PE=1 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|Q2FK07|LRGB_STAA3 Antiholin-like protein LrgB OS=Staphylococcus aureus (strain
USA300) GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|A6TY48|LRGB_STAA2 Antiholin-like protein LrgB OS=Staphylococcus aureus (strain JH1)
GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|A7WXS7|LRGB_STAA1 Antiholin-like protein LrgB OS=Staphylococcus aureus (strain Mu3 /
ATCC 700698) GN=lrgB PE=3 SV=1
Length = 233
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 RLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQATLDKL 88
+L + +S+LP+ T A+AL VS G LT+ V++ G+I L
Sbjct: 117 KLAQFANDVILSMLPQAATTAIALP-VSAGIGGIKELTSLAVILNGVIIYALGNKFLKLF 175
Query: 89 RFRDPIARGIATASSAHGLGTAALSAKE 116
R +PIARG+A +S H LG A AKE
Sbjct: 176 RITNPIARGLALGTSGHTLGVA--PAKE 201
>sp|Q4A012|LRGB_STAS1 Antiholin-like protein LrgB OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=lrgB
PE=3 SV=1
Length = 233
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 1 LVKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 60
++K++ +I + L T +L L + S+LP+ T A+AL VS G
Sbjct: 89 VLKKYWKQILGGITLGTTAALVCIYLIAEAFQFSNGIIASMLPQGATTAIALP-VSADIG 147
Query: 61 ANSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKE 116
LT+ V++ G+I + +PIARG+A +S H LG + SA+E
Sbjct: 148 GIKELTSLAVILNGVIIYALGSKLIKLFNITNPIARGLALGTSGHSLGVS--SAQE 201
>sp|P45146|Y1298_HAEIN Uncharacterized protein HI_1298 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1298 PE=3 SV=1
Length = 231
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 2 VKRHAAEIFMSVILSTLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGA 61
+ R I +V++++ ++ S L L+G P + ++LP+ IT+ +A+ VS G
Sbjct: 85 IARQWKIILSTVVIASFLAMLSGGLLALLLGSTPEMVATVLPKSITMPIAME-VSRHLGG 143
Query: 62 NSSLTAAVVVVTGLIGANFVQATLDKLRFRDPIARGIATASSAHGLGTAALSAKEPEALP 121
++TA VVV GL G+ F L KL + A G++ S +H LGT + P A
Sbjct: 144 IPAVTAVGVVVAGLQGSIFGYLVLKKLGVKHQEAIGLSVGSVSHALGTVSCMETNPTAGS 203
Query: 122 FCAIAYALTGIFGSLI 137
+ +I+ L GI S++
Sbjct: 204 YSSISLVLCGIISSIL 219
>sp|A8G5I6|TRMFO_PROM2 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Prochlorococcus marinus (strain MIT 9215) GN=trmFO
PE=3 SV=1
Length = 470
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 94 IARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLICS 139
I G+A + +A + A + K E PF + TG FG L+CS
Sbjct: 9 IGAGLAGSEAAWQVANAGVPVKLVEMRPFKSTPAHHTGEFGELVCS 54
>sp|Q00578|RAD25_YEAST DNA repair helicase RAD25 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SSL2 PE=1 SV=1
Length = 843
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 17 TLFSLYSTALAGRLVGLEPSLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVV 72
T +SLY A VGLE +S+L R V +A SI++ +GA S +V+
Sbjct: 176 TAYSLY----AAVSVGLETDDIISVLDRLSKVPVAESIINFIKGATISYGKVKLVI 227
>sp|Q7VFT5|NUON_HELHP NADH-quinone oxidoreductase subunit N OS=Helicobacter hepaticus
(strain ATCC 51449 / 3B1) GN=nuoN PE=3 SV=1
Length = 492
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 39 VSILPRCITVALALSIVSLFEGANSSL---TAAVVVVTGLIGANFVQATLDKLRFRDPIA 95
++I+P+ +T A+ + I S+F ++S+ T V+VV + N + T + +
Sbjct: 251 IAIVPKIVTFAVIIRIFSVFIDSHSAFVEYTLYVIVVLTMTIPNLIALT------QKDVK 304
Query: 96 RGIATASSAH-GLGTAALSAKEPEA-----LPFCAIAYALTGIFGSLICSVPAVRQ 145
R +A +S +H G AA+ P++ + +A G FG L SV +
Sbjct: 305 RMLAYSSISHSGFVLAAVLINTPQSHSVIFFYWFLFLFANIGAFGILWLSVDCKKN 360
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.135 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,402,254
Number of Sequences: 539616
Number of extensions: 1459764
Number of successful extensions: 5749
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 5663
Number of HSP's gapped (non-prelim): 66
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)