Query 043502
Match_columns 949
No_of_seqs 36 out of 38
Neff 2.4
Searched_HMMs 29240
Date Mon Mar 25 09:25:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043502.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043502hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ofz_A Fucose-specific lectin; 98.8 1.6E-07 5.6E-12 97.8 19.3 199 618-836 24-246 (312)
2 1ofz_A Fucose-specific lectin; 98.6 2.7E-06 9.1E-11 88.8 21.1 237 579-839 26-300 (312)
3 3q7m_A Lipoprotein YFGL, BAMB; 98.4 6.3E-05 2.2E-09 73.7 22.3 231 567-827 95-332 (376)
4 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00017 5.8E-09 70.7 24.8 239 572-840 50-304 (376)
5 3hxj_A Pyrrolo-quinoline quino 97.6 0.018 6.2E-07 54.2 21.7 211 575-828 107-320 (330)
6 2xbg_A YCF48-like protein; pho 97.5 0.02 6.7E-07 57.2 22.3 214 575-827 98-317 (327)
7 3hxj_A Pyrrolo-quinoline quino 97.4 0.0022 7.7E-08 60.3 12.9 207 575-828 70-280 (330)
8 2xbg_A YCF48-like protein; pho 97.2 0.027 9.1E-07 56.3 18.9 170 576-780 142-317 (327)
9 3v9f_A Two-component system se 96.8 0.9 3.1E-05 50.0 36.9 156 234-404 73-237 (781)
10 2hz6_A Endoplasmic reticulum t 96.8 0.0034 1.1E-07 63.7 8.8 177 574-780 8-187 (369)
11 3no0_A DNA gyrase subunit A; D 96.1 0.25 8.4E-06 50.1 17.3 195 173-404 25-244 (276)
12 3b7f_A Glycosyl hydrolase, BNR 95.7 2 6.9E-05 43.4 22.0 259 575-843 67-383 (394)
13 2hz6_A Endoplasmic reticulum t 95.7 0.014 4.9E-07 59.1 6.5 186 612-844 5-205 (369)
14 3no2_A Uncharacterized protein 95.6 0.9 3.1E-05 44.5 18.8 100 613-740 11-113 (276)
15 1zi0_A DNA gyrase subunit A; b 95.2 0.64 2.2E-05 47.6 16.8 213 175-404 45-275 (307)
16 3no2_A Uncharacterized protein 94.9 0.67 2.3E-05 45.4 15.4 110 182-311 6-117 (276)
17 2ad6_A Methanol dehydrogenase 94.7 3 0.0001 45.6 21.2 163 575-742 115-343 (571)
18 2be1_A Serine/threonine-protei 94.6 0.24 8.1E-06 52.3 12.1 121 616-747 10-144 (339)
19 1kb0_A Quinohemoprotein alcoho 94.6 1.1 3.7E-05 50.0 17.7 128 610-745 71-210 (677)
20 1w6s_A Methanol dehydrogenase 94.5 2.3 7.9E-05 47.4 20.2 166 577-742 123-350 (599)
21 3b7f_A Glycosyl hydrolase, BNR 94.5 1.9 6.5E-05 43.6 17.8 157 616-795 22-217 (394)
22 1kb0_A Quinohemoprotein alcoho 94.3 0.93 3.2E-05 50.5 16.4 119 574-702 76-211 (677)
23 4asc_A Kelch repeat and BTB do 94.2 4.3 0.00015 39.3 21.4 215 577-822 6-252 (315)
24 1flg_A Protein (quinoprotein e 94.0 6.4 0.00022 43.3 21.9 168 575-742 117-363 (582)
25 2uvk_A YJHT; unknown function, 93.7 3.4 0.00012 40.5 17.4 191 604-821 6-260 (357)
26 2ad6_A Methanol dehydrogenase 93.4 2.1 7.2E-05 46.8 16.9 127 610-745 56-196 (571)
27 2be1_A Serine/threonine-protei 93.2 0.76 2.6E-05 48.5 12.5 123 575-703 10-144 (339)
28 3uc1_A DNA gyrase subunit A; D 93.2 1.5 5E-05 45.8 14.5 236 175-444 45-299 (327)
29 3sfz_A APAF-1, apoptotic pepti 92.7 16 0.00056 41.5 36.8 146 569-735 1009-1157(1249)
30 3uc1_A DNA gyrase subunit A; D 92.7 1.1 3.6E-05 46.9 12.6 203 233-459 48-277 (327)
31 1yiq_A Quinohemoprotein alcoho 92.4 2.7 9.1E-05 47.0 16.1 116 574-699 69-201 (689)
32 1flg_A Protein (quinoprotein e 92.1 7.5 0.00026 42.8 19.0 124 611-743 63-202 (582)
33 1suu_A DNA gyrase subunit A; t 92.1 4.9 0.00017 41.2 16.5 111 181-298 8-129 (312)
34 1gxr_A ESG1, transducin-like e 92.0 7.5 0.00026 35.8 24.0 139 667-831 148-293 (337)
35 3a0f_A Xyloglucanase; beta-pro 92.0 2.9 0.0001 47.3 16.0 155 674-845 559-733 (763)
36 1zi0_A DNA gyrase subunit A; b 91.9 4.3 0.00015 41.6 15.7 248 183-462 5-278 (307)
37 1yiq_A Quinohemoprotein alcoho 91.4 10 0.00035 42.3 19.4 125 610-743 64-201 (689)
38 1zgk_A Kelch-like ECH-associat 91.4 9.1 0.00031 37.1 16.7 178 615-822 23-224 (308)
39 1kv9_A Type II quinohemoprotei 91.0 5.3 0.00018 44.3 16.6 115 574-698 65-195 (668)
40 1tl2_A L10, protein (tachylect 90.9 0.52 1.8E-05 48.7 7.9 104 566-684 42-157 (236)
41 1k3i_A Galactose oxidase precu 90.7 6.9 0.00024 42.7 16.8 103 565-679 187-305 (656)
42 1gxr_A ESG1, transducin-like e 90.6 10 0.00036 34.9 24.2 135 667-826 190-331 (337)
43 1p22_A F-BOX/WD-repeat protein 90.3 16 0.00054 36.6 20.9 210 573-831 141-362 (435)
44 1r5m_A SIR4-interacting protei 90.3 13 0.00044 35.4 22.0 139 665-831 211-358 (425)
45 2vpj_A Kelch-like protein 12; 90.2 13 0.00044 35.4 21.8 196 593-822 39-262 (301)
46 3zwl_B Eukaryotic translation 90.2 6.8 0.00023 36.5 14.1 73 229-303 178-250 (369)
47 3mkq_A Coatomer beta'-subunit; 89.5 25 0.00085 37.6 22.3 221 569-826 61-296 (814)
48 4asc_A Kelch repeat and BTB do 88.8 12 0.0004 36.3 15.1 155 593-774 75-251 (315)
49 3odt_A Protein DOA1; ubiquitin 88.5 14 0.0005 33.7 24.6 220 573-831 27-252 (313)
50 3ii7_A Kelch-like protein 7; p 87.8 20 0.00068 34.4 20.2 195 594-821 33-255 (306)
51 1tl2_A L10, protein (tachylect 87.7 1.2 4.1E-05 46.0 7.8 61 616-686 51-112 (236)
52 3v9f_A Two-component system se 87.5 39 0.0013 37.3 41.9 247 132-404 23-285 (781)
53 4aez_A CDC20, WD repeat-contai 87.4 12 0.0004 37.1 14.3 185 181-405 103-292 (401)
54 4a2l_A BT_4663, two-component 87.2 40 0.0014 37.3 41.7 233 132-403 47-288 (795)
55 3i2n_A WD repeat-containing pr 86.7 20 0.0007 33.4 15.5 111 183-303 131-244 (357)
56 3gre_A Serine/threonine-protei 85.7 26 0.0009 34.5 15.7 68 234-303 178-246 (437)
57 3vl1_A 26S proteasome regulato 85.4 8.5 0.00029 37.3 11.9 67 234-303 255-323 (420)
58 1zgk_A Kelch-like ECH-associat 85.4 28 0.00095 33.7 22.5 195 593-821 47-270 (308)
59 1wp5_A Topoisomerase IV; broke 85.4 32 0.0011 35.8 16.9 214 175-405 42-276 (323)
60 3mmy_A MRNA export factor; mRN 85.2 24 0.00082 32.8 19.0 190 183-406 56-247 (368)
61 3no0_A DNA gyrase subunit A; D 84.8 6.9 0.00023 39.7 11.4 59 239-299 36-96 (276)
62 2vpj_A Kelch-like protein 12; 84.8 28 0.00095 33.2 19.2 158 567-744 105-286 (301)
63 3l6v_A GYRA, DNA gyrase subuni 84.7 45 0.0015 35.5 18.3 119 139-275 58-205 (370)
64 3l6v_A GYRA, DNA gyrase subuni 84.6 20 0.00067 38.2 15.3 211 234-461 53-316 (370)
65 1kv9_A Type II quinohemoprotei 84.4 7 0.00024 43.4 12.3 126 178-310 63-196 (668)
66 2fp8_A Strictosidine synthase; 84.3 31 0.0011 33.4 18.2 51 766-829 259-309 (322)
67 1w6s_A Methanol dehydrogenase 84.3 58 0.002 36.4 28.0 127 178-311 59-201 (599)
68 3a0f_A Xyloglucanase; beta-pro 83.3 29 0.00098 39.4 16.8 75 715-797 143-223 (763)
69 3u4y_A Uncharacterized protein 83.1 14 0.00049 34.6 12.0 152 233-405 46-206 (331)
70 3vgz_A Uncharacterized protein 83.0 31 0.0011 32.3 17.0 72 226-303 140-216 (353)
71 1sqj_A OXG-RCBH, oligoxylogluc 82.6 27 0.00091 39.9 16.2 159 671-843 27-211 (789)
72 3odt_A Protein DOA1; ubiquitin 82.5 29 0.00099 31.7 21.1 119 158-299 10-130 (313)
73 2cn3_A Xyloglucanase, beta-1,4 82.5 6 0.0002 44.5 10.8 110 714-839 574-694 (737)
74 1suu_A DNA gyrase subunit A; t 82.5 26 0.0009 35.9 14.7 142 138-299 58-228 (312)
75 1wp5_A Topoisomerase IV; broke 81.5 21 0.00072 37.1 13.7 199 183-408 7-227 (323)
76 2xn4_A Kelch-like protein 2; s 80.3 42 0.0014 32.1 19.8 198 595-822 40-260 (302)
77 2xn4_A Kelch-like protein 2; s 80.1 43 0.0015 32.0 22.2 193 575-793 61-283 (302)
78 2bt9_A Lectin; sugar recogniti 80.0 2.3 8E-05 38.5 5.3 65 766-836 15-82 (90)
79 2uvk_A YJHT; unknown function, 80.0 47 0.0016 32.5 19.8 99 567-679 12-126 (357)
80 2ovr_B FBW7, F-BOX/WD repeat p 79.9 51 0.0017 32.8 22.3 218 136-405 167-390 (445)
81 2ovr_B FBW7, F-BOX/WD repeat p 79.2 54 0.0018 32.7 22.2 214 573-832 127-346 (445)
82 2woz_A Kelch repeat and BTB do 79.1 48 0.0017 32.1 20.2 211 584-822 22-262 (318)
83 3v7d_B Cell division control p 79.0 54 0.0018 32.6 22.4 220 571-833 128-380 (464)
84 4a2l_A BT_4663, two-component 78.6 86 0.0029 34.7 37.5 152 236-404 182-337 (795)
85 1yfq_A Cell cycle arrest prote 78.5 43 0.0015 31.2 18.2 155 229-406 59-225 (342)
86 2zwa_A Leucine carboxyl methyl 78.3 29 0.001 38.9 14.5 158 568-741 443-640 (695)
87 3bws_A Protein LP49; two-domai 78.1 17 0.00058 35.6 11.1 68 230-303 257-335 (433)
88 1p22_A F-BOX/WD-repeat protein 78.0 59 0.002 32.5 20.5 211 574-831 182-411 (435)
89 2zwa_A Leucine carboxyl methyl 77.8 67 0.0023 36.0 17.2 194 604-821 385-615 (695)
90 4aow_A Guanine nucleotide-bind 77.3 45 0.0015 30.9 13.2 70 231-303 91-160 (340)
91 3ii7_A Kelch-like protein 7; p 77.2 52 0.0018 31.5 22.4 179 568-774 49-255 (306)
92 2aq5_A Coronin-1A; WD40 repeat 77.2 58 0.002 31.9 17.4 63 667-734 138-205 (402)
93 3iuj_A Prolyl endopeptidase; h 77.0 53 0.0018 36.1 15.7 76 231-309 238-323 (693)
94 3sfz_A APAF-1, apoptotic pepti 76.9 1.1E+02 0.0037 35.0 35.8 145 569-734 967-1114(1249)
95 2woz_A Kelch repeat and BTB do 76.7 57 0.0019 31.6 17.5 155 593-774 86-261 (318)
96 2dg1_A DRP35, lactonase; beta 76.0 55 0.0019 31.0 15.5 12 813-824 291-302 (333)
97 1sqj_A OXG-RCBH, oligoxylogluc 75.9 47 0.0016 37.9 15.5 76 715-798 131-212 (789)
98 1yfq_A Cell cycle arrest prote 75.8 52 0.0018 30.7 20.4 147 568-736 16-179 (342)
99 3bws_A Protein LP49; two-domai 75.8 62 0.0021 31.6 18.9 19 717-735 314-333 (433)
100 1k3i_A Galactose oxidase precu 75.3 43 0.0015 36.5 14.4 114 616-742 197-329 (656)
101 1pgu_A Actin interacting prote 74.4 79 0.0027 32.1 36.2 98 717-831 456-569 (615)
102 4g56_B MGC81050 protein; prote 73.9 72 0.0025 31.5 18.8 141 574-734 52-211 (357)
103 3hfq_A Uncharacterized protein 72.1 70 0.0024 30.5 18.4 20 386-405 250-270 (347)
104 3scy_A Hypothetical bacterial 71.9 21 0.00071 34.4 9.8 20 386-405 221-241 (361)
105 1k8k_C P40, ARP2/3 complex 41 71.8 67 0.0023 30.2 22.6 150 569-733 14-170 (372)
106 1r5m_A SIR4-interacting protei 70.9 73 0.0025 30.3 30.0 21 283-303 120-140 (425)
107 2ojh_A Uncharacterized protein 70.6 58 0.002 29.0 16.1 70 229-303 87-163 (297)
108 3mmy_A MRNA export factor; mRN 70.5 69 0.0023 29.8 19.5 217 574-823 97-337 (368)
109 3v7d_B Cell division control p 70.5 89 0.003 31.0 20.5 225 140-405 175-420 (464)
110 3ott_A Two-component system se 70.3 1.3E+02 0.0045 33.0 31.9 134 240-404 34-172 (758)
111 3g4e_A Regucalcin; six bladed 67.8 88 0.003 30.0 14.4 27 667-694 60-86 (297)
112 3dr2_A Exported gluconolactona 66.6 92 0.0031 29.8 13.1 225 148-405 34-305 (305)
113 3mkq_A Coatomer beta'-subunit; 66.4 1.4E+02 0.0049 31.9 24.6 220 575-833 25-258 (814)
114 3jrp_A Fusion protein of prote 66.4 86 0.003 29.3 25.4 146 573-733 21-188 (379)
115 1yr2_A Prolyl oligopeptidase; 66.2 1.2E+02 0.0041 33.3 15.4 77 231-310 272-359 (741)
116 3amr_A 3-phytase; beta-propell 65.7 25 0.00086 37.9 9.8 142 616-782 49-207 (355)
117 1sq9_A Antiviral protein SKI8; 65.7 96 0.0033 29.7 15.7 71 229-303 189-268 (397)
118 4g56_B MGC81050 protein; prote 65.4 1.1E+02 0.0037 30.2 18.7 170 129-303 43-259 (357)
119 3pe7_A Oligogalacturonate lyas 65.1 81 0.0028 30.3 12.3 18 230-247 191-209 (388)
120 4a5s_A Dipeptidyl peptidase 4 64.8 71 0.0024 35.0 13.3 33 266-303 70-102 (740)
121 2ymu_A WD-40 repeat protein; u 64.7 1.3E+02 0.0044 30.7 24.0 230 571-827 269-534 (577)
122 3k26_A Polycomb protein EED; W 64.6 91 0.0031 29.0 19.8 147 138-303 34-193 (366)
123 3zwl_B Eukaryotic translation 64.5 91 0.0031 29.0 24.0 61 668-735 183-248 (369)
124 3vl1_A 26S proteasome regulato 64.1 1.1E+02 0.0037 29.7 23.4 20 386-405 67-86 (420)
125 3f3f_A Nucleoporin SEH1; struc 63.9 86 0.0029 28.5 21.1 67 237-303 70-144 (351)
126 3fvz_A Peptidyl-glycine alpha- 63.5 1E+02 0.0034 30.0 12.8 18 717-734 154-173 (329)
127 2vdu_B TRNA (guanine-N(7)-)-me 63.2 1.1E+02 0.0038 30.7 13.4 69 231-303 154-230 (450)
128 1k8k_C P40, ARP2/3 complex 41 61.6 1.1E+02 0.0037 28.8 23.4 187 569-784 58-273 (372)
129 3ei3_B DNA damage-binding prot 61.1 1.2E+02 0.0041 29.2 17.1 103 182-302 132-236 (383)
130 2hqs_A Protein TOLB; TOLB, PAL 60.8 1.2E+02 0.0043 30.7 13.5 67 229-303 181-257 (415)
131 2cn3_A Xyloglucanase, beta-1,4 59.7 2.3E+02 0.0078 31.9 23.8 112 718-843 211-350 (737)
132 3scy_A Hypothetical bacterial 58.7 1.3E+02 0.0045 28.9 19.3 24 386-409 316-340 (361)
133 4a11_B DNA excision repair pro 58.2 1.3E+02 0.0043 28.5 16.5 192 183-407 158-366 (408)
134 3ott_A Two-component system se 57.2 2.3E+02 0.0078 31.2 22.7 111 668-795 153-269 (758)
135 1nir_A Nitrite reductase; hemo 57.2 2.1E+02 0.0072 30.8 17.8 73 230-303 225-312 (543)
136 3jro_A Fusion protein of prote 56.4 2.4E+02 0.0082 31.2 22.1 147 574-733 20-186 (753)
137 3dwl_C Actin-related protein 2 56.3 1.4E+02 0.0048 28.5 19.8 54 768-832 219-280 (377)
138 3u4y_A Uncharacterized protein 55.5 1.3E+02 0.0046 28.0 13.4 19 285-303 53-72 (331)
139 1q7f_A NHL, brain tumor CG1071 54.9 1.3E+02 0.0046 27.8 22.3 64 666-735 126-193 (286)
140 1ri6_A Putative isomerase YBHE 54.7 1.3E+02 0.0045 27.7 18.9 69 229-301 131-208 (343)
141 1erj_A Transcriptional repress 54.4 1.6E+02 0.0056 29.1 12.8 161 229-406 126-287 (393)
142 4gqb_B Methylosome protein 50; 53.5 1.8E+02 0.0062 28.9 17.6 156 130-303 32-202 (344)
143 4aez_A CDC20, WD repeat-contai 50.6 1.9E+02 0.0067 28.4 21.6 219 141-405 149-379 (401)
144 3dwl_C Actin-related protein 2 50.2 1.1E+02 0.0037 29.2 10.4 151 233-405 18-176 (377)
145 1pjx_A Dfpase, DIISOPROPYLFLUO 49.7 1.6E+02 0.0055 27.3 12.1 15 719-733 189-204 (314)
146 2p4o_A Hypothetical protein; p 49.2 1.2E+02 0.004 29.4 10.6 64 667-734 78-145 (306)
147 2dg1_A DRP35, lactonase; beta 49.2 1.8E+02 0.0061 27.5 17.4 12 292-303 161-172 (333)
148 2aq5_A Coronin-1A; WD40 repeat 47.4 2.1E+02 0.0073 28.0 15.0 55 577-631 146-203 (402)
149 1sq9_A Antiviral protein SKI8; 47.0 2E+02 0.0068 27.5 20.1 63 666-734 192-265 (397)
150 1pgu_A Actin interacting prote 46.6 2.5E+02 0.0085 28.5 35.8 191 230-460 164-365 (615)
151 3e5z_A Putative gluconolactona 46.6 1.9E+02 0.0065 27.1 17.2 22 667-688 75-97 (296)
152 3i2n_A WD repeat-containing pr 46.0 1.9E+02 0.0064 26.9 21.5 62 673-734 131-197 (357)
153 2p9w_A MAL S 1 allergenic prot 44.6 1.3E+02 0.0046 32.1 11.0 50 767-827 159-210 (334)
154 2bkl_A Prolyl endopeptidase; m 44.5 3.4E+02 0.012 29.5 17.1 18 231-248 231-248 (695)
155 2bt9_A Lectin; sugar recogniti 42.9 26 0.00088 31.8 4.5 60 719-790 17-82 (90)
156 4aow_A Guanine nucleotide-bind 42.4 2.1E+02 0.0072 26.5 16.6 149 233-405 135-285 (340)
157 3amr_A 3-phytase; beta-propell 41.2 2.9E+02 0.0099 29.8 13.0 155 233-404 43-208 (355)
158 1yr2_A Prolyl oligopeptidase; 41.1 4E+02 0.014 29.3 14.3 66 233-302 322-395 (741)
159 2pm9_A Protein WEB1, protein t 41.0 2.2E+02 0.0074 27.3 10.9 161 229-406 70-249 (416)
160 4ery_A WD repeat-containing pr 40.9 2.3E+02 0.0078 26.5 12.4 154 229-405 152-311 (312)
161 1q7f_A NHL, brain tumor CG1071 40.1 2.3E+02 0.0078 26.2 18.4 19 717-735 131-150 (286)
162 3o4h_A Acylamino-acid-releasin 40.0 1.8E+02 0.0061 30.4 10.9 18 230-247 153-170 (582)
163 3azo_A Aminopeptidase; POP fam 39.9 1.3E+02 0.0046 31.6 10.1 18 230-247 191-208 (662)
164 2ecf_A Dipeptidyl peptidase IV 39.1 1.6E+02 0.0054 31.5 10.5 16 233-248 215-230 (741)
165 2ecf_A Dipeptidyl peptidase IV 38.4 1.3E+02 0.0045 32.1 9.8 20 229-248 39-59 (741)
166 3qqz_A Putative uncharacterize 38.0 3.3E+02 0.011 27.5 16.5 208 607-834 21-254 (255)
167 2qe8_A Uncharacterized protein 37.8 2E+02 0.0068 28.3 10.4 27 767-793 132-162 (343)
168 3hfq_A Uncharacterized protein 36.8 2.8E+02 0.0096 26.3 19.4 25 386-410 296-321 (347)
169 1zvt_A Topoisomerase IV subuni 36.3 2.4E+02 0.0081 28.3 10.8 96 184-298 5-110 (256)
170 1pby_B Quinohemoprotein amine 35.7 99 0.0034 28.5 7.4 121 233-359 40-175 (337)
171 3g4e_A Regucalcin; six bladed 35.4 1.4E+02 0.0048 28.5 8.6 12 291-302 128-139 (297)
172 3jrp_A Fusion protein of prote 34.1 2.9E+02 0.01 25.7 19.3 194 181-405 69-286 (379)
173 1qks_A Cytochrome CD1 nitrite 33.8 5E+02 0.017 28.6 13.8 69 233-302 246-329 (567)
174 3f6k_A Sortilin; protein sorti 33.6 1.1E+02 0.0038 35.5 8.9 160 661-843 12-180 (685)
175 2hqs_A Protein TOLB; TOLB, PAL 33.5 3.9E+02 0.013 27.1 12.0 20 229-248 225-245 (415)
176 1rwi_B Serine/threonine-protei 32.6 2.8E+02 0.0096 25.1 22.1 63 666-736 113-180 (270)
177 1jmx_B Amine dehydrogenase; ox 31.4 2.9E+02 0.0098 25.7 9.8 65 231-303 259-326 (349)
178 3jro_A Fusion protein of prote 30.9 5.8E+02 0.02 28.2 18.6 121 283-406 113-238 (753)
179 3hrp_A Uncharacterized protein 30.3 4.7E+02 0.016 26.9 24.2 66 666-734 176-247 (409)
180 3f6k_A Sortilin; protein sorti 29.7 1.3E+02 0.0043 35.0 8.5 71 716-796 101-179 (685)
181 3vgz_A Uncharacterized protein 28.9 3.6E+02 0.012 25.1 25.6 64 666-735 146-214 (353)
182 1pjx_A Dfpase, DIISOPROPYLFLUO 28.9 1.9E+02 0.0066 26.7 8.2 16 389-404 238-254 (314)
183 1l0q_A Surface layer protein; 28.7 3.9E+02 0.013 25.5 19.8 215 578-827 5-228 (391)
184 4e54_B DNA damage-binding prot 28.6 2.2E+02 0.0074 28.6 9.0 22 284-305 222-243 (435)
185 3dm0_A Maltose-binding peripla 28.4 5.8E+02 0.02 27.4 12.9 75 229-303 475-551 (694)
186 4a11_B DNA excision repair pro 28.1 3.9E+02 0.013 25.2 20.0 166 234-405 152-322 (408)
187 2p4o_A Hypothetical protein; p 26.9 1.7E+02 0.0057 28.3 7.7 20 283-302 127-147 (306)
188 1b2p_A Protein (lectin); manno 26.5 2.6E+02 0.0089 24.9 8.3 62 232-307 22-85 (119)
189 1zvt_A Topoisomerase IV subuni 26.5 1.4E+02 0.0048 29.9 7.3 105 138-259 44-167 (256)
190 3f3f_A Nucleoporin SEH1; struc 25.8 3.7E+02 0.013 24.3 21.5 60 671-734 71-141 (351)
191 2ghs_A AGR_C_1268P; regucalcin 25.8 3.1E+02 0.011 26.8 9.4 24 231-254 182-207 (326)
192 3o4h_A Acylamino-acid-releasin 25.5 5.9E+02 0.02 26.5 12.9 19 228-246 23-41 (582)
193 3e5z_A Putative gluconolactona 23.7 4.5E+02 0.015 24.5 20.0 17 717-733 183-199 (296)
194 3v65_B Low-density lipoprotein 23.4 6.1E+02 0.021 25.9 11.9 112 174-296 88-217 (386)
195 2xdw_A Prolyl endopeptidase; a 23.1 7.5E+02 0.026 26.8 14.2 17 231-247 237-253 (710)
196 3gre_A Serine/threonine-protei 23.1 5.4E+02 0.018 25.2 19.4 119 171-303 168-293 (437)
197 1n7d_A LDL receptor, low-densi 22.9 8.5E+02 0.029 27.4 15.5 54 767-829 552-610 (699)
198 2z2n_A Virginiamycin B lyase; 22.6 4.3E+02 0.015 23.9 22.3 225 571-827 63-290 (299)
199 3iuj_A Prolyl endopeptidase; h 22.5 7.9E+02 0.027 26.9 20.3 67 233-303 286-360 (693)
200 3lrv_A PRE-mRNA-splicing facto 22.4 5.2E+02 0.018 24.8 18.0 97 716-832 138-242 (343)
201 1z7e_A Protein aRNA; rossmann 22.2 78 0.0027 35.0 4.9 65 661-728 255-326 (660)
202 2mad_H Methylamine dehydrogena 21.1 6.7E+02 0.023 25.6 13.4 13 233-245 72-84 (373)
203 3f14_A Uncharacterized NTF2-li 20.9 42 0.0015 28.5 2.0 15 906-920 95-109 (112)
204 1zvu_A Topoisomerase IV subuni 20.7 1E+03 0.035 28.3 13.7 145 181-350 514-673 (716)
205 1xip_A Nucleoporin NUP159; bet 20.7 4.3E+02 0.015 28.2 9.9 142 237-403 96-261 (388)
206 2qc5_A Streptogramin B lactona 20.7 4.8E+02 0.016 23.7 21.4 61 667-734 152-216 (300)
207 3i0y_A Putative polyketide cyc 20.6 44 0.0015 28.5 2.0 17 442-458 110-126 (140)
208 3dsm_A Uncharacterized protein 20.3 6E+02 0.021 24.7 19.8 198 609-827 9-248 (328)
209 3ei3_B DNA damage-binding prot 20.2 5.8E+02 0.02 24.5 20.8 19 716-734 174-192 (383)
No 1
>1ofz_A Fucose-specific lectin; sugar-binding protein, AAL, aleuria aurantia lectin; HET: FUL FUC; 1.5A {Aleuria aurantia} SCOP: b.68.8.1 PDB: 1iuc_A* 1iub_A*
Probab=98.82 E-value=1.6e-07 Score=97.82 Aligned_cols=199 Identities=13% Similarity=0.220 Sum_probs=122.7
Q ss_pred ceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeec----ccCcEEEEecCCeEeEEEEeceee
Q 043502 618 SLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVT----AEDALFFVSKNGRLLQFTVALRKF 693 (949)
Q Consensus 618 sLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt----~~dklF~vt~~GrLlq~tva~rkw 693 (949)
.||..|.+|.|+|+.+.++. .|..-+. . ..+....|-. |=+|.-.- ..=.+|..++|+.|.|..+....
T Consensus 24 ~Vy~q~~~n~i~e~~~~~~~-~W~~~~~-~--~~~~~~~~~S--plAAv~~~~~~~~~i~Vfy~~~dn~l~e~~~~~~~- 96 (312)
T 1ofz_A 24 RVYFQDLNGKIREAQRGGDN-PWTGGSS-Q--NVIGEAKLFS--PLAAVTWKSAQGIQIRVYCVNKDNILSEFVYDGSK- 96 (312)
T ss_dssp EEEEEBTTSEEEEEEEETTS-CCEECSG-G--GEEEECSTTC--CCEEEEEEETTEEEEEEEEECTTCBEEEEEEESSC-
T ss_pred EEEEECCCCCEEEEEECCCC-CcccCcc-c--ccccccccCC--CceEEEecCCCCCEEEEEEECCCCcEEEEEecCCC-
Confidence 47999999999999999844 5877432 1 1111111111 22222121 23478999999999999998644
Q ss_pred eeec--CCC-----CCCcceEEee-cccccc--cCeEEEE---ccCceEee--ecCceee-eeecCCCCceeeecCCCce
Q 043502 694 KWKD--CRH-----PLDTKVACIV-DQELFR--ENIVFVV---GRNGRLYQ--YNKVTEL-WHEHYQSQHLVLSILPGTA 757 (949)
Q Consensus 694 kW~d--hg~-----PPgTkIata~-d~~~~r--~~~iFvv---G~NGrLYE--wNg~TW~-WhdHGkP~~t~ls~~pGtA 757 (949)
|.. .+. .|+++||.+- ..--.+ .=+||+- +.|..|+| |++. |. |-..|++ .+||+
T Consensus 97 -W~~g~L~~~~~~~~~~S~lAAvs~~~~~~~~~~i~Vf~q~~~~~dn~I~e~~~~g~-W~~~~~lg~~-------~~gT~ 167 (312)
T 1ofz_A 97 -WITGQLGSVGVKVGSNSKLAALQWGGSESAPPNIRVYYQKSNLSGSSIHEYVWSGK-WTAGASFGST-------APGTG 167 (312)
T ss_dssp -EEECGGGGGCCBCCTTCCCEEEEESCBTTBCCEEEEEECSCCSTTEEEEEEEESSS-EEEEEEEEEE-------STTCC
T ss_pred -ccccccCCcccccCCCCcceEEEecCCCCCCCeEEEEEEeccCCCCeEEEEEccCC-cccCCCcCCc-------cCCCC
Confidence 543 322 2688885541 111001 1148999 99999999 8987 66 6554411 22222
Q ss_pred ecCCC-CCCcceEEEEecCCCeEEEEEeCCCCeE--EeecCC-CCCCceeecCCCCcccCceEEEEecCCceEEEEEeCC
Q 043502 758 MRPPS-ASLTGSLFMLSEDGGLVEYHWNTWDGWN--WVEHGT-PGKGVTLVGSPGPCLHGNQLLLIGSDGKVYLRYMDQM 833 (949)
Q Consensus 758 M~psk-~sl~gslFm~~snG~LyEr~Wntg~gW~--WVdHGt-P~~gvtvv~spG~sf~gsqLFviGSDG~LYeRywdg~ 833 (949)
+.... .....++|..+.|+.|+|+.|+ +++|+ -+.++. |.++++.+.-.+.. .-.||..+.|+++|+..|++
T Consensus 168 laa~s~~~~~i~vf~q~~dn~i~~~~~d-~~~W~~~~~~~~~~p~s~lAavs~~~~~--~i~lf~~~~~n~i~~~~~~~- 243 (312)
T 1ofz_A 168 IGATAIGPGRLRIYYQATDNKIREHCWD-SNSWYVGGFSASASAGVSIAAISWGSTP--NIRVYWQKGREELYEAAYGG- 243 (312)
T ss_dssp EEEEEEETTEEEEEEEBTTSEEEEEEES-SSCEEEEEEEEECCTTCEEEEEEETTTT--EEEEEEECTTSCEEEEEESS-
T ss_pred cceeecCCCCEEEEEEcCCCcEEEEEec-CCcceECCEecCcCCCCCcEEEEeCCCC--EEEEEEECCCCcEEEEEecC-
Confidence 11100 1236799999999999999999 57776 222332 44334433222211 56899999999999999995
Q ss_pred cce
Q 043502 834 TWR 836 (949)
Q Consensus 834 tWt 836 (949)
+|+
T Consensus 244 ~W~ 246 (312)
T 1ofz_A 244 SWN 246 (312)
T ss_dssp SBC
T ss_pred Ccc
Confidence 565
No 2
>1ofz_A Fucose-specific lectin; sugar-binding protein, AAL, aleuria aurantia lectin; HET: FUL FUC; 1.5A {Aleuria aurantia} SCOP: b.68.8.1 PDB: 1iuc_A* 1iub_A*
Probab=98.62 E-value=2.7e-06 Score=88.81 Aligned_cols=237 Identities=9% Similarity=0.067 Sum_probs=141.2
Q ss_pred EEEeeCCeeEEEEecC-CEEEEEecCC--------C-CCccccccc----cccceEEEeccCcEEEEEecCCCceeeecc
Q 043502 579 FLITDGGFTFEYLYAE-SVWLWLRHDH--------S-TPMRGVLGN----YNGSLYMVDLYGSLLIRERSSNELAWINCT 644 (949)
Q Consensus 579 fliTd~G~~fE~~~~~-~~WlWl~H~h--------~-T~m~g~~g~----~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t 644 (949)
|...-+|.+.|..|+. +.| ..-.. | ||+.-+... ..=.||.++.|+.|.++-|+++. |..-+
T Consensus 26 y~q~~~n~i~e~~~~~~~~W--~~~~~~~~~~~~~~~SplAAv~~~~~~~~~i~Vfy~~~dn~l~e~~~~~~~--W~~g~ 101 (312)
T 1ofz_A 26 YFQDLNGKIREAQRGGDNPW--TGGSSQNVIGEAKLFSPLAAVTWKSAQGIQIRVYCVNKDNILSEFVYDGSK--WITGQ 101 (312)
T ss_dssp EEEBTTSEEEEEEEETTSCC--EECSGGGEEEECSTTCCCEEEEEEETTEEEEEEEEECTTCBEEEEEEESSC--EEECG
T ss_pred EEECCCCCEEEEEECCCCCc--ccCcccccccccccCCCceEEEecCCCCCEEEEEEECCCCcEEEEEecCCC--ccccc
Confidence 4456678899999996 444 44332 2 444433221 22368999999999999999854 75432
Q ss_pred CCCCC-ceeecCCCCCCCCCcceeec----ccCcEEEE---ecCCeEeEEEEeceeeeeecCC-CCCCcceEEeeccccc
Q 043502 645 AMRKG-RQVIGGPPWDGITGKAMKVT----AEDALFFV---SKNGRLLQFTVALRKFKWKDCR-HPLDTKVACIVDQELF 715 (949)
Q Consensus 645 ~mr~G-~~V~~G~pwdgipG~~~~vt----~~dklF~v---t~~GrLlq~tva~rkwkW~dhg-~PPgTkIata~d~~~~ 715 (949)
|..- -++..| .+|--....-. ..=.+|+- +.|..++|+.+..++-.|...| .+|||.+|...-..
T Consensus 102 -L~~~~~~~~~~---S~lAAvs~~~~~~~~~~i~Vf~q~~~~~dn~I~e~~~~g~W~~~~~lg~~~~gT~laa~s~~~-- 175 (312)
T 1ofz_A 102 -LGSVGVKVGSN---SKLAALQWGGSESAPPNIRVYYQKSNLSGSSIHEYVWSGKWTAGASFGSTAPGTGIGATAIGP-- 175 (312)
T ss_dssp -GGGGCCBCCTT---CCCEEEEESCBTTBCCEEEEEECSCCSTTEEEEEEEESSSEEEEEEEEEESTTCCEEEEEEET--
T ss_pred -cCCcccccCCC---CcceEEEecCCCCCCCeEEEEEEeccCCCCeEEEEEccCCcccCCCcCCccCCCCcceeecCC--
Confidence 2110 011111 11111111000 01137888 8889999999987733444433 34788886664432
Q ss_pred ccCeEEEEccCceEee--ecCceee--eeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeE-
Q 043502 716 RENIVFVVGRNGRLYQ--YNKVTEL--WHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWN- 790 (949)
Q Consensus 716 r~~~iFvvG~NGrLYE--wNg~TW~--WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~- 790 (949)
+.-+||..+.|.+|+| |++..|. .+.+.-++++-|. |++.+.. ...++|.++.|+.|+++.|+ ++|+
T Consensus 176 ~~i~vf~q~~dn~i~~~~~d~~~W~~~~~~~~~~p~s~lA----avs~~~~--~~i~lf~~~~~n~i~~~~~~--~~W~~ 247 (312)
T 1ofz_A 176 GRLRIYYQATDNKIREHCWDSNSWYVGGFSASASAGVSIA----AISWGST--PNIRVYWQKGREELYEAAYG--GSWNT 247 (312)
T ss_dssp TEEEEEEEBTTSEEEEEEESSSCEEEEEEEEECCTTCEEE----EEEETTT--TEEEEEEECTTSCEEEEEES--SSBCC
T ss_pred CCEEEEEEcCCCcEEEEEecCCcceECCEecCcCCCCCcE----EEEeCCC--CEEEEEEECCCCcEEEEEec--CCccc
Confidence 4558999999999998 8876543 2223334444433 3333211 16789999999999999999 4587
Q ss_pred ------EeecCC--CCCCceeecCCCCcccCceEEEEecCCceE--EEEEeCCcceeee
Q 043502 791 ------WVEHGT--PGKGVTLVGSPGPCLHGNQLLLIGSDGKVY--LRYMDQMTWRWKN 839 (949)
Q Consensus 791 ------WVdHGt--P~~gvtvv~spG~sf~gsqLFviGSDG~LY--eRywdg~tWtW~N 839 (949)
|...+. |.+.+..+.-.+ ..-.||+.+ ..++ |=-|++.. -|..
T Consensus 248 ~~~~~d~~~~~~~~~~s~~aa~s~~~---~~i~lf~q~--~~i~~~~~~w~~~~-~w~~ 300 (312)
T 1ofz_A 248 PGQIKDASRPTPSLPDTFIAANSSGN---IDISVFFQA--SGVSLQQWQWISGK-GWSI 300 (312)
T ss_dssp CEEECCTTSCSCBCTTCCCEEEEETT---TEEEEEEEE--TTTEEEEEEEETTT-EEEE
T ss_pred cccccCcccccCcCCCCceEEEecCC---CeEEEEEeC--CeeEEEEEEecCCC-cccc
Confidence 544443 333333333333 256899999 7889 66666642 4555
No 3
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.38 E-value=6.3e-05 Score=73.71 Aligned_cols=231 Identities=12% Similarity=0.205 Sum_probs=141.4
Q ss_pred ceEEEEecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCC
Q 043502 567 FRLRVMHGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAM 646 (949)
Q Consensus 567 f~~rvmh~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~m 646 (949)
+.--+.-.+..+|+.|.+|.++-+=-..+.-+|-. ..+..+..++-..++.||+...+|.|+.-.-..-...|......
T Consensus 95 ~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~-~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 95 LSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT-KVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp EEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEE-ECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred cccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEE-eCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 34445566789999999998876654557767743 33444555556678888888888888777765566777654321
Q ss_pred CCCceeecCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecC-CCCCCcc-e---EEeecccccccCeEE
Q 043502 647 RKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDC-RHPLDTK-V---ACIVDQELFRENIVF 721 (949)
Q Consensus 647 r~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dh-g~PPgTk-I---ata~d~~~~r~~~iF 721 (949)
+ +.. +.+...-+..++.+|+.+.+|+|+-+-....+..|... +.|.+.. + ..+....+..++.+|
T Consensus 174 ~----~~~------~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~ 243 (376)
T 3q7m_A 174 P----SLS------LRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVF 243 (376)
T ss_dssp ---------------CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEE
T ss_pred C----cee------ecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEE
Confidence 1 110 11112223357889999999999988887888888764 3343321 1 111122234578999
Q ss_pred EEccCceEeeec--CceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecCCCCC
Q 043502 722 VVGRNGRLYQYN--KVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPGK 799 (949)
Q Consensus 722 vvG~NGrLYEwN--g~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~~ 799 (949)
+.+.+|+||-++ .+...|........ +.+. ..+.+|+.+.+|.||-.-=.+|. =.|.....+..
T Consensus 244 ~~~~~g~l~~~d~~tG~~~w~~~~~~~~-------~~~~------~~~~l~~~~~~g~l~~~d~~tG~-~~w~~~~~~~~ 309 (376)
T 3q7m_A 244 ALAYNGNLTALDLRSGQIMWKRELGSVN-------DFIV------DGNRIYLVDQNDRVMALTIDGGV-TLWTQSDLLHR 309 (376)
T ss_dssp EECTTSCEEEEETTTCCEEEEECCCCEE-------EEEE------ETTEEEEEETTCCEEEEETTTCC-EEEEECTTTTS
T ss_pred EEecCcEEEEEECCCCcEEeeccCCCCC-------CceE------ECCEEEEEcCCCeEEEEECCCCc-EEEeecccCCC
Confidence 999999999965 35667876532211 1111 24679999999999864333232 23554322110
Q ss_pred CceeecCCCCcccCceEEEEecCCceEE
Q 043502 800 GVTLVGSPGPCLHGNQLLLIGSDGKVYL 827 (949)
Q Consensus 800 gvtvv~spG~sf~gsqLFviGSDG~LYe 827 (949)
....+...+++||+...+|.||.
T Consensus 310 -----~~~~~~~~~~~l~v~~~~g~l~~ 332 (376)
T 3q7m_A 310 -----LLTSPVLYNGNLVVGDSEGYLHW 332 (376)
T ss_dssp -----CCCCCEEETTEEEEECTTSEEEE
T ss_pred -----cccCCEEECCEEEEEeCCCeEEE
Confidence 12234556789999999998774
No 4
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.36 E-value=0.00017 Score=70.70 Aligned_cols=239 Identities=15% Similarity=0.223 Sum_probs=143.2
Q ss_pred EecCceEEEEeeCCeeEEEEecCCEEEEEecCC---------CCCccccccccccceEEEeccCcEEEEEecCCCceeee
Q 043502 572 MHGSRSFFLITDGGFTFEYLYAESVWLWLRHDH---------STPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWIN 642 (949)
Q Consensus 572 mh~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h---------~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n 642 (949)
+-.+..+|+.+.+|.++-+=-..+.=+|-..-. ..++.+++...++.||+.+.+|.|..-.-..-...|.-
T Consensus 50 ~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 50 ALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 335688999999998876544456667754432 23455666668899999999998888776666677865
Q ss_pred ccCCCCCceeecCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEE
Q 043502 643 CTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFV 722 (949)
Q Consensus 643 ~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFv 722 (949)
-.. ..+... -+..++.+|+.+.+|.|+-+-....+..|......+...+.....+.+ .++.+|+
T Consensus 130 ~~~----~~~~~~-----------p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~v~~ 193 (376)
T 3q7m_A 130 KVA----GEALSR-----------PVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-AFGAAVV 193 (376)
T ss_dssp ECS----SCCCSC-----------CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-ETTEEEE
T ss_pred eCC----CceEcC-----------CEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-ECCEEEE
Confidence 422 112111 133588999999999999888888888888655443322211112223 3678999
Q ss_pred EccCceEeeec--CceeeeeecC-CCCcee-ee---cCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecC
Q 043502 723 VGRNGRLYQYN--KVTELWHEHY-QSQHLV-LS---ILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHG 795 (949)
Q Consensus 723 vG~NGrLYEwN--g~TW~WhdHG-kP~~t~-ls---~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHG 795 (949)
.+.+|+||-++ .+...|.... .|.+.. +. ...++.. -..+.+|+.+.+|.||-.-=.+| .=.|...
T Consensus 194 g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~-----~~~~~v~~~~~~g~l~~~d~~tG-~~~w~~~- 266 (376)
T 3q7m_A 194 GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPV-----VVNGVVFALAYNGNLTALDLRSG-QIMWKRE- 266 (376)
T ss_dssp CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCE-----EETTEEEEECTTSCEEEEETTTC-CEEEEEC-
T ss_pred EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcE-----EECCEEEEEecCcEEEEEECCCC-cEEeecc-
Confidence 99999999965 4677787653 333221 11 0111111 12467899998999876432222 2224332
Q ss_pred CCCCCceeecCCCCcccCceEEEEecCCceEEEEEeCCcceeeec
Q 043502 796 TPGKGVTLVGSPGPCLHGNQLLLIGSDGKVYLRYMDQMTWRWKNC 840 (949)
Q Consensus 796 tP~~gvtvv~spG~sf~gsqLFviGSDG~LYeRywdg~tWtW~Nh 840 (949)
..+ ..++...+++||+...+|.+|.-=-+...=.|...
T Consensus 267 --~~~-----~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 267 --LGS-----VNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp --CCC-----EEEEEEETTEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred --CCC-----CCCceEECCEEEEEcCCCeEEEEECCCCcEEEeec
Confidence 111 12345668899999999998754332223345543
No 5
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.55 E-value=0.018 Score=54.17 Aligned_cols=211 Identities=16% Similarity=0.230 Sum_probs=118.6
Q ss_pred CceEEEEeeCCeeEEEEecCCEEEEEecCCCCCcccccccc-ccceEEEeccCcEEEEEecCCCceeeeccCCCCCceee
Q 043502 575 SRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNY-NGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVI 653 (949)
Q Consensus 575 ~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~-ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~ 653 (949)
++.+|+.|.+|.+|-+=-. +.=+|-... +.++..++-.. +|.||+...+|.|..-... ....|..... + .++
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~---~-~~~ 179 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTN---D-AIT 179 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECS---S-CCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecC---C-Cce
Confidence 6889999988877755433 555665442 23333333333 6777777776766665554 4455544311 0 111
Q ss_pred cCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEccCceEeeec
Q 043502 654 GGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQYN 733 (949)
Q Consensus 654 ~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEwN 733 (949)
..+.+..++.+++.+ +.|+.+- ...+..|.-.-. +..+ .....-.++.|++.+.+|.||.++
T Consensus 180 ----------~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~--~~~~---~~~~~~~~g~l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 180 ----------SAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAG--YWTV---TRPAISEDGTIYVTSLDGHLYAIN 241 (330)
T ss_dssp ----------SCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCS--SCCC---SCCEECTTSCEEEEETTTEEEEEC
T ss_pred ----------eeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccC--Ccce---eceEECCCCeEEEEcCCCeEEEEC
Confidence 123344678888888 7787766 555666764421 1112 122334456899999999999976
Q ss_pred C-ceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecCCCCCCceeecCCCCcc-
Q 043502 734 K-VTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCL- 811 (949)
Q Consensus 734 g-~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf- 811 (949)
. +...|+---. ...++ +.+. ...+.+++.+.+|+||-. +..+.=.|... .|. .. ...+..
T Consensus 242 ~~g~~~~~~~~~--~~~~~----~~~~----~~~g~l~v~t~~ggl~~~--d~~g~~~~~~~-~~~---~~--~~~~~~d 303 (330)
T 3hxj_A 242 PDGTEKWRFKTG--KRIES----SPVI----GNTDTIYFGSYDGHLYAI--NPDGTEKWNFE-TGS---WI--IATPVID 303 (330)
T ss_dssp TTSCEEEEEECS--SCCCS----CCEE----CTTSCEEEECTTCEEEEE--CTTSCEEEEEE-CSS---CC--CSCCEEC
T ss_pred CCCCEeEEeeCC--CCccc----cceE----cCCCeEEEecCCCCEEEE--CCCCcEEEEEE-cCC---cc--ccceEEc
Confidence 5 4455753221 11111 1111 124679999999999875 43333334322 221 11 112233
Q ss_pred cCceEEEEecCCceEEE
Q 043502 812 HGNQLLLIGSDGKVYLR 828 (949)
Q Consensus 812 ~gsqLFviGSDG~LYeR 828 (949)
.+++||+.+.+|.++..
T Consensus 304 ~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 304 ENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp TTCCEEEECTTSCEEEE
T ss_pred CCCEEEEEcCCCeEEEE
Confidence 35789999999998754
No 6
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.49 E-value=0.02 Score=57.20 Aligned_cols=214 Identities=14% Similarity=0.214 Sum_probs=114.6
Q ss_pred CceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeec
Q 043502 575 SRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIG 654 (949)
Q Consensus 575 ~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~ 654 (949)
...+|..+|+|.+|+..-... .+|..+......-++.+|++..+|.|+ |-.. ..-.|.......++
T Consensus 98 ~g~i~~S~DgG~tW~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~~~g~v~-~S~D-gG~tW~~~~~~~~~----- 163 (327)
T 2xbg_A 98 PPIMLHTTDGGQSWSQIPLDP-------KLPGSPRLIKALGNGSAEMITNVGAIY-RTKD-SGKNWQALVQEAIG----- 163 (327)
T ss_dssp TTEEEEESSTTSSCEECCCCT-------TCSSCEEEEEEEETTEEEEEETTCCEE-EESS-TTSSEEEEECSCCC-----
T ss_pred CCeEEEECCCCCCceECcccc-------CCCCCeEEEEEECCCCEEEEeCCccEE-EEcC-CCCCCEEeecCCCc-----
Confidence 346777777777777765321 112111222222467889988888764 3222 12345544321111
Q ss_pred CCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEccCceEeeec-
Q 043502 655 GPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQYN- 733 (949)
Q Consensus 655 G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEwN- 733 (949)
.+- .+.+..++.+++++.+|.+|.-. ....-+|.....|+...+..+. ...++.+++++.+|.+|..+
T Consensus 164 -----~~~--~~~~~~~~~~~~~g~~G~~~~S~-d~gG~tW~~~~~~~~~~~~~~~---~~~~g~~~~~~~~G~~~~s~~ 232 (327)
T 2xbg_A 164 -----VMR--NLNRSPSGEYVAVSSRGSFYSTW-EPGQTAWEPHNRTTSRRLHNMG---FTPDGRLWMIVNGGKIAFSDP 232 (327)
T ss_dssp -----CEE--EEEECTTSCEEEEETTSSEEEEE-CTTCSSCEEEECCSSSCEEEEE---ECTTSCEEEEETTTEEEEEET
T ss_pred -----ceE--EEEEcCCCcEEEEECCCcEEEEe-CCCCCceeECCCCCCCccceeE---ECCCCCEEEEeCCceEEEecC
Confidence 111 12233456677777777766432 2223345544445444443221 23456888999999999863
Q ss_pred CceeeeeecCCC---CceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecCCCC-CCceeecCCCC
Q 043502 734 KVTELWHEHYQS---QHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPG-KGVTLVGSPGP 809 (949)
Q Consensus 734 g~TW~WhdHGkP---~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~-~gvtvv~spG~ 809 (949)
..-.+|..-..| .+.-+. .-+..+ .+.+++.+.+|.+|. .-+.|..|.=+..+.+. ..++-+
T Consensus 233 D~G~tW~~~~~~~~~~~~~~~---~v~~~~-----~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~v----- 298 (327)
T 2xbg_A 233 DNSENWGELLSPLRRNSVGFL---DLAYRT-----PNEVWLAGGAGALLC-SQDGGQTWQQDVDVKKVPSNFYKI----- 298 (327)
T ss_dssp TEEEEECCCBCTTSSCCSCEE---EEEESS-----SSCEEEEESTTCEEE-ESSTTSSCEECGGGTTSSSCCCEE-----
T ss_pred CCCCeeEeccCCcccCCcceE---EEEecC-----CCEEEEEeCCCeEEE-eCCCCcccEEcCccCCCCCCeEEE-----
Confidence 334566665544 221111 011122 356899999999975 33556788877655332 122211
Q ss_pred cc-cCceEEEEecCCceEE
Q 043502 810 CL-HGNQLLLIGSDGKVYL 827 (949)
Q Consensus 810 sf-~gsqLFviGSDG~LYe 827 (949)
.| .+++++++|.+|.+|+
T Consensus 299 ~~~~~~~~~~~G~~G~i~~ 317 (327)
T 2xbg_A 299 LFFSPDQGFILGQKGILLR 317 (327)
T ss_dssp EEEETTEEEEECSTTEEEE
T ss_pred EEECCCceEEEcCCceEEE
Confidence 12 3578999999998874
No 7
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.35 E-value=0.0022 Score=60.28 Aligned_cols=207 Identities=15% Similarity=0.285 Sum_probs=107.3
Q ss_pred CceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeec
Q 043502 575 SRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIG 654 (949)
Q Consensus 575 ~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~ 654 (949)
++.+|+.|++ +|-+ ...+.=+|- +..+......+..++|.||+...+|.|..-... ....|..-.. ..++.
T Consensus 70 ~g~l~v~t~~--l~~~-d~~g~~~~~-~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~----~~~~~ 140 (330)
T 3hxj_A 70 DGTIYFGSDK--VYAI-NPDGTEKWR-FDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTK----KAIYA 140 (330)
T ss_dssp TTEECCSSCE--EEEE-CCCGGGGGG-SCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECS----SCCCS
T ss_pred CCcEEEecCc--EEEE-CCCCcEEEE-EECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCC----Cceee
Confidence 4556666655 4433 222222221 222222333344457777777777777665544 3456654321 11111
Q ss_pred CCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEccCceEeeecC
Q 043502 655 GPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQYNK 734 (949)
Q Consensus 655 G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEwNg 734 (949)
.+.+..++.+++.+.+|.|+.+--. .+..|..... +..+. ++..-.++.+++.+ |.||.++.
T Consensus 141 ----------~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~--~~~~~---~~~~d~~g~l~v~t--~~l~~~d~ 202 (330)
T 3hxj_A 141 ----------TPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTN--DAITS---AASIGKDGTIYFGS--DKVYAINP 202 (330)
T ss_dssp ----------CCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECS--SCCCS---CCEECTTCCEEEES--SSEEEECT
T ss_pred ----------eeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecC--CCcee---eeEEcCCCEEEEEe--CEEEEECC
Confidence 1234458889999998998877665 5556654321 11121 12232466777777 88999764
Q ss_pred c-eeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC--eEEeecCCCCCCceeecCCCCcc
Q 043502 735 V-TELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG--WNWVEHGTPGKGVTLVGSPGPCL 811 (949)
Q Consensus 735 ~-TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g--W~WVdHGtP~~gvtvv~spG~sf 811 (949)
. ...|...... .. +. +... .-.+.+++.+.+|+||.. +..+. |+....+ +. ...+.+
T Consensus 203 ~g~~~~~~~~~~-~~-~~----~~~~----~~~g~l~v~t~~~gl~~~--~~~g~~~~~~~~~~-~~-------~~~~~~ 262 (330)
T 3hxj_A 203 DGTEKWNFYAGY-WT-VT----RPAI----SEDGTIYVTSLDGHLYAI--NPDGTEKWRFKTGK-RI-------ESSPVI 262 (330)
T ss_dssp TSCEEEEECCSS-CC-CS----CCEE----CTTSCEEEEETTTEEEEE--CTTSCEEEEEECSS-CC-------CSCCEE
T ss_pred CCcEEEEEccCC-cc-ee----ceEE----CCCCeEEEEcCCCeEEEE--CCCCCEeEEeeCCC-Cc-------cccceE
Confidence 3 4567654321 11 11 1111 123579999999999986 43222 4332221 11 112334
Q ss_pred c-CceEEEEecCCceEEE
Q 043502 812 H-GNQLLLIGSDGKVYLR 828 (949)
Q Consensus 812 ~-gsqLFviGSDG~LYeR 828 (949)
+ +++|++.+.+|.+|.-
T Consensus 263 ~~~g~l~v~t~~ggl~~~ 280 (330)
T 3hxj_A 263 GNTDTIYFGSYDGHLYAI 280 (330)
T ss_dssp CTTSCEEEECTTCEEEEE
T ss_pred cCCCeEEEecCCCCEEEE
Confidence 4 5788888888887753
No 8
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.16 E-value=0.027 Score=56.26 Aligned_cols=170 Identities=16% Similarity=0.214 Sum_probs=93.6
Q ss_pred ceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecC
Q 043502 576 RSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGG 655 (949)
Q Consensus 576 ~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G 655 (949)
..+|..+|+|.+|+..-. +.+..+.+..-.-++.++++..+|.++. ...+..-.|..... ....
T Consensus 142 g~v~~S~DgG~tW~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~G~~~~-S~d~gG~tW~~~~~-~~~~----- 205 (327)
T 2xbg_A 142 GAIYRTKDSGKNWQALVQ---------EAIGVMRNLNRSPSGEYVAVSSRGSFYS-TWEPGQTAWEPHNR-TTSR----- 205 (327)
T ss_dssp CCEEEESSTTSSEEEEEC---------SCCCCEEEEEECTTSCEEEEETTSSEEE-EECTTCSSCEEEEC-CSSS-----
T ss_pred ccEEEEcCCCCCCEEeec---------CCCcceEEEEEcCCCcEEEEECCCcEEE-EeCCCCCceeECCC-CCCC-----
Confidence 345555555655555543 2232222222223678898998888754 33322344544421 1111
Q ss_pred CCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCC---CCcceEEeecccccccCeEEEEccCceEee-
Q 043502 656 PPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHP---LDTKVACIVDQELFRENIVFVVGRNGRLYQ- 731 (949)
Q Consensus 656 ~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~P---PgTkIata~d~~~~r~~~iFvvG~NGrLYE- 731 (949)
.+. .+.+..++.+++++.+|.++..+ .-..-+|..-..| .+..+..+ . ...++.++++|.+|.||.
T Consensus 206 ----~~~--~~~~~~~g~~~~~~~~G~~~~s~-~D~G~tW~~~~~~~~~~~~~~~~v-~--~~~~~~~~~~g~~g~i~~S 275 (327)
T 2xbg_A 206 ----RLH--NMGFTPDGRLWMIVNGGKIAFSD-PDNSENWGELLSPLRRNSVGFLDL-A--YRTPNEVWLAGGAGALLCS 275 (327)
T ss_dssp ----CEE--EEEECTTSCEEEEETTTEEEEEE-TTEEEEECCCBCTTSSCCSCEEEE-E--ESSSSCEEEEESTTCEEEE
T ss_pred ----ccc--eeEECCCCCEEEEeCCceEEEec-CCCCCeeEeccCCcccCCcceEEE-E--ecCCCEEEEEeCCCeEEEe
Confidence 111 23346788899999999876432 2335678776655 22333222 1 113568999999999998
Q ss_pred -ecCceeeeeecCCC-CceeeecCCCceecCCCCCCcceEEEEecCCCeEE
Q 043502 732 -YNKVTELWHEHYQS-QHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVE 780 (949)
Q Consensus 732 -wNg~TW~WhdHGkP-~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyE 780 (949)
++|.+|.=...+.+ +..++. .+..+ ...+|+++.+|.++.
T Consensus 276 ~DgG~tW~~~~~~~~~~~~~~~----v~~~~-----~~~~~~~G~~G~i~~ 317 (327)
T 2xbg_A 276 QDGGQTWQQDVDVKKVPSNFYK----ILFFS-----PDQGFILGQKGILLR 317 (327)
T ss_dssp SSTTSSCEECGGGTTSSSCCCE----EEEEE-----TTEEEEECSTTEEEE
T ss_pred CCCCcccEEcCccCCCCCCeEE----EEEEC-----CCceEEEcCCceEEE
Confidence 66777765554422 222211 22221 346999999998886
No 9
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.79 E-value=0.9 Score=50.02 Aligned_cols=156 Identities=11% Similarity=0.104 Sum_probs=78.1
Q ss_pred eecCCcEEEEEecCCceeEee-ccCCCccc-----cCCCCCCCceeEEe-eccccCCceEEEEccCCceeeeccCCchhh
Q 043502 234 VSQDGERVYFCTKNGLLLELS-EVEPPRWL-----NHGRPPGANVAAIA-DAGNVRPEVVYTISSTGDLYEYDRISKPSW 306 (949)
Q Consensus 234 vs~dg~~lff~~knG~LLe~t-el~p~rW~-----~hg~PPga~VA~I~-D~~~~R~~vVftiss~GdLYeYnr~tkpsW 306 (949)
...+|++|++.|.+|-|-.+. +-+.|+=- .....+...|.+|+ |.. ..+.|++....+-||.||..++ ..
T Consensus 73 ~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~--~~g~lwi~t~~~gl~~~~~~~~-~~ 149 (781)
T 3v9f_A 73 TDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQ--AGKGLWVCTYYRGIEYLDIATG-KF 149 (781)
T ss_dssp ECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSS--TTSEEEEEESSSCEEEEETTTT-EE
T ss_pred EcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCc--cCCCEEEEECCCCeeEEECCCC-eE
Confidence 344566588888884455554 22222211 11223344676664 321 1356776654667999998776 33
Q ss_pred hhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccceeEEEcCCCCCCcc--cccceeccCCcc
Q 043502 307 RKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKWKWIIHGSPEDTHL--TSITPVQQDESN 384 (949)
Q Consensus 307 ~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkWkWi~HGtP~~~~l--~siT~v~~d~~~ 384 (949)
+ ++-.+.. ...+.. .+..+.-+....|++-|.+++|..+.....+.+-+.|.......+ ..|.-+.+|..
T Consensus 150 ~-~~~~~~~--~~l~~~----~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~- 221 (781)
T 3v9f_A 150 T-HYNKSTV--PALPSE----QTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTN- 221 (781)
T ss_dssp E-EESTTTC--TTCSCC----CEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTT-
T ss_pred E-eeccCcc--cCCCcc----ceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCC-
Confidence 2 2221110 000111 122232233347888888878887665566677776643221111 23555555543
Q ss_pred ccceEEEEEcccceEEEEee
Q 043502 385 EKFFSLFLTTSAGAVFEYQI 404 (949)
Q Consensus 385 ~~~~sLF~t~S~G~Vyey~~ 404 (949)
-.|++.|.. -+|.|..
T Consensus 222 ---g~lwigt~~-Gl~~~d~ 237 (781)
T 3v9f_A 222 ---GNIWIGTSK-GLALFNA 237 (781)
T ss_dssp ---CCEEEEETT-EEEEEET
T ss_pred ---CCEEEEeCC-cHheECC
Confidence 237776665 4777654
No 10
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.78 E-value=0.0034 Score=63.70 Aligned_cols=177 Identities=12% Similarity=0.112 Sum_probs=83.7
Q ss_pred cCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEE-eccCcEEEEEecCCCceeeeccCCCCCcee
Q 043502 574 GSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMV-DLYGSLLIRERSSNELAWINCTAMRKGRQV 652 (949)
Q Consensus 574 ~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~v-d~~GsL~~R~~~g~~~~W~n~t~mr~G~~V 652 (949)
.++.+|+.+.||.++-.=-..+.=+|-... .++..++...+|.+|++ ..+|+|..=....-+..|..-... + ..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~--~-~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI--P-EL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH--H-HH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC--c-cc
Confidence 467899999999876543345655665544 34555555577878887 578887765543333445442211 1 11
Q ss_pred ecCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEccCceEeee
Q 043502 653 IGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQY 732 (949)
Q Consensus 653 ~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEw 732 (949)
+...| -+..++.+|+.+.+|+|+-+-..+.+..|.-.... .+..++ .++.+|+.+.||+||-|
T Consensus 83 ~~~sp---------~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p-----~~~~v~~~~~dg~v~a~ 145 (369)
T 2hz6_A 83 VQASP---------CRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSP-----STSLLYLGRTEYTITMY 145 (369)
T ss_dssp HTTCS---------CC-----CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECC
T ss_pred cccCc---------eEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccc-----cCCEEEEEecCCEEEEE
Confidence 12212 11145667778888888777666677777654321 122332 57789999999999997
Q ss_pred cC--ceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEE
Q 043502 733 NK--VTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVE 780 (949)
Q Consensus 733 Ng--~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyE 780 (949)
+- +...|.-.... ...-++.+ .....+.+|+.+.||.++-
T Consensus 146 d~~tG~~~W~~~~~~-------~~~~~~~~-~~~~~~~v~~~~~dg~v~a 187 (369)
T 2hz6_A 146 DTKTRELRWNATYFD-------YAASLPED-DVDYKMSHFVSNGDGLVVT 187 (369)
T ss_dssp CSSSSSCCCEEEEEE-------ECCBCCCC-CTTCCCCEEEEETSCEEEE
T ss_pred ECCCCCEEEeEeccc-------ccCccccC-CccccceEEEECCCCEEEE
Confidence 63 45567643211 01111211 1112356888888888865
No 11
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=96.06 E-value=0.25 Score=50.12 Aligned_cols=195 Identities=17% Similarity=0.208 Sum_probs=105.1
Q ss_pred CeEEEEEEec--eeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCce
Q 043502 173 PAISVFIVNQ--RILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLL 250 (949)
Q Consensus 173 ~ai~vfivn~--tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~L 250 (949)
.-+++|.+|+ +||.++..|.+|++...|-..--|.. + +.+.++=..+.. .- .+...++|+|++|.+
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-------l-l~~~e~i~~v~~-~~---~~~~~~v~~T~~G~i 92 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-------L-KSREEKIVGAFI-RE---KFGNRLLLATKKGYV 92 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-------C-SSTTCCEEEEEE-GG---GSCSEEEEEETTSEE
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-------c-CCCCCEEEEEEC-Cc---CCCCEEEEEeCCCEE
Confidence 3456667764 59999999999999654421111222 2 222232222222 11 166799999999998
Q ss_pred eEee--ccCCCc---cccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhccccccccccccccCc
Q 043502 251 LELS--EVEPPR---WLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSM 325 (949)
Q Consensus 251 Le~t--el~p~r---W~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~ 325 (949)
..+. +++ .| ..--.-.+|-.|..+.-... .+-|+.++++|++|-|+-..-|.=.+ .+.
T Consensus 93 Kr~~l~~~~-~~~~G~~~i~lkegD~l~~~~~~~~--~~~ill~T~~G~~~r~~~~eip~~gR--------------~a~ 155 (276)
T 3no0_A 93 KKIPLAEFE-YKAQGMPIIKLTEGDEVVSIASSVD--ETHILLFTKKGRVARFSVREVPPSTP--------------GAR 155 (276)
T ss_dssp EEEEGGGTT-TCSTTEECSCCCTTCCEEEEEECCS--SCEEEEEETTSEEEEEEGGGSCBCCT--------------TCC
T ss_pred EEEEHHHhh-hhcCCeEEEecCCCCEEEEEEEeCC--CCEEEEEECCCEEEEEEhhhCCCcCC--------------CCC
Confidence 8776 454 21 00011223334433322221 24577899999999996433321100 011
Q ss_pred cccccccc----------CCceeeEEEEecCCcEEEE-----Eeeccc-eeEEEcCCCCCCcccccceeccCCccccceE
Q 043502 326 ACTLHGLI----------GDHSTSLFLLTKGGNLVER-----RIQQRK-WKWIIHGSPEDTHLTSITPVQQDESNEKFFS 389 (949)
Q Consensus 326 g~t~~gl~----------g~~S~SLFlltk~G~LVEr-----r~~qrk-WkWi~HGtP~~~~l~siT~v~~d~~~~~~~s 389 (949)
|-....|. ....-.|+|+|+.|..-.- +...|+ --=+.. .+.+.|.++.++. .. -.
T Consensus 156 Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i--~~~~~lv~~~~~~---~~---~~ 227 (276)
T 3no0_A 156 GVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS--GTKDTLVDLIPIK---EE---VE 227 (276)
T ss_dssp CEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC--CSSSCEEEEEEES---SE---EE
T ss_pred CEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE--cCCCcEEEEEEeC---CC---CE
Confidence 11111111 0112379999999976543 333332 222222 4555566655552 11 36
Q ss_pred EEEEcccceEEE--Eee
Q 043502 390 LFLTTSAGAVFE--YQI 404 (949)
Q Consensus 390 LF~t~S~G~Vye--y~~ 404 (949)
++++|+.|++-+ +..
T Consensus 228 i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 228 LLITTKNGKAFYDKINQ 244 (276)
T ss_dssp EEEEETTSCEEEEEEEG
T ss_pred EEEEcCCCeEEEeeeCH
Confidence 999999999998 877
No 12
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.69 E-value=2 Score=43.36 Aligned_cols=259 Identities=13% Similarity=0.200 Sum_probs=120.2
Q ss_pred CceEEEEeeCC----eeEEEEecCCEEEEEecCC--CCCc--------cc--cccc---c-ccceEEEeccCcEEEEEec
Q 043502 575 SRSFFLITDGG----FTFEYLYAESVWLWLRHDH--STPM--------RG--VLGN---Y-NGSLYMVDLYGSLLIRERS 634 (949)
Q Consensus 575 ~~s~fliTd~G----~~fE~~~~~~~WlWl~H~h--~T~m--------~g--~~g~---~-ngsLf~vd~~GsL~~R~~~ 634 (949)
...+|+.|+.| -+|-.--.+..|.-+.... +... .- ++.. . ++.||++...|-|+.-.-.
T Consensus 67 ~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg 146 (394)
T 3b7f_A 67 PERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH 146 (394)
T ss_dssp TTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST
T ss_pred CCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC
Confidence 56788888887 5664444455676665431 1111 00 1111 1 6788888877776643333
Q ss_pred CCCceeeeccCC--CCCceeecCCCCCC-CCCc---ceeecc--cCcEEEEecCCeEeEEEEeceeeeeecCCC-----C
Q 043502 635 SNELAWINCTAM--RKGRQVIGGPPWDG-ITGK---AMKVTA--EDALFFVSKNGRLLQFTVALRKFKWKDCRH-----P 701 (949)
Q Consensus 635 g~~~~W~n~t~m--r~G~~V~~G~pwdg-ipG~---~~~vt~--~dklF~vt~~GrLlq~tva~rkwkW~dhg~-----P 701 (949)
|. .|...... .|.+....+.|=+| .++. ++.+.. ++.+|+++.+|.||...=.+..|+=...+. |
T Consensus 147 G~--tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p 224 (394)
T 3b7f_A 147 GA--SWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLP 224 (394)
T ss_dssp TS--BCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSS
T ss_pred CC--CeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccC
Confidence 33 45443321 01110000000011 1111 232322 356888887777765433343333222221 2
Q ss_pred C-----CcceEE-eecccccccCeEEEEccCceEeeecCceeeeeec--CCCCceeeecCCCceecCCCCCCcceEEEEe
Q 043502 702 L-----DTKVAC-IVDQELFRENIVFVVGRNGRLYQYNKVTELWHEH--YQSQHLVLSILPGTAMRPPSASLTGSLFMLS 773 (949)
Q Consensus 702 P-----gTkIat-a~d~~~~r~~~iFvvG~NGrLYEwNg~TW~WhdH--GkP~~t~ls~~pGtAM~psk~sl~gslFm~~ 773 (949)
+ +..|.. +++ .-+.+.|++.+. +.||..+....+|..- +.|.... ..+.++... ....+.+|+.+
T Consensus 225 ~~~~~~g~~~~~i~~~--~~~~~~l~vg~~-~gl~~s~D~G~tW~~~~~~l~~~~~---~~~~~i~~~-p~~~~~l~~~t 297 (394)
T 3b7f_A 225 DPNVEFGHDPHCVVQH--PAAPDILYQQNH-CGIYRMDRREGVWKRIGDAMPREVG---DIGFPIVVH-QRDPRTVWVFP 297 (394)
T ss_dssp SSSSSSCBCEEEEEEC--SSSTTEEEEEET-TEEEEEETTTTEEECGGGGSCTTTC---SCEEEEEEC-SSCTTCEEEEE
T ss_pred CCccccCcceeEEEEC--CCCCCEEEEEcC-CeEEEeCCCCCcceECCCCCCCCCc---cceEEEEEC-CCCCCEEEEEe
Confidence 1 112322 222 223467887654 5599854444455443 2333100 001122211 12245677765
Q ss_pred cC-------------CCeEEEEEeCCCCeEEeecCCCCCCcee-ecCCCCcc---cCceEEEEecCCceEEEEEeCCcce
Q 043502 774 ED-------------GGLVEYHWNTWDGWNWVEHGTPGKGVTL-VGSPGPCL---HGNQLLLIGSDGKVYLRYMDQMTWR 836 (949)
Q Consensus 774 sn-------------G~LyEr~Wntg~gW~WVdHGtP~~gvtv-v~spG~sf---~gsqLFviGSDG~LYeRywdg~tWt 836 (949)
.+ +.|| +.-+.|..|.=+..|.|...... +....-++ ..+.|++.+.+|.+|+-.=.+.+|+
T Consensus 298 ~~~~~~w~~~~~~~~~~~~-~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~D~G~tW~ 376 (394)
T 3b7f_A 298 MDGSDVWPRVSPGGKPAVY-VTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASADEGEHWQ 376 (394)
T ss_dssp CBCCSSTTCCBCCSSCCEE-EESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEESSTTSBCE
T ss_pred ccCCccceeecCCCceeEE-EECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEECCCCCCce
Confidence 32 2555 33344567887777877532210 00011112 2345777666889995443466999
Q ss_pred eeecCCC
Q 043502 837 WKNCGFP 843 (949)
Q Consensus 837 W~NhG~P 843 (949)
=++.+-|
T Consensus 377 ~~~~~lp 383 (394)
T 3b7f_A 377 CIASHLP 383 (394)
T ss_dssp EEECSCS
T ss_pred EcccCCC
Confidence 8888877
No 13
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.67 E-value=0.014 Score=59.11 Aligned_cols=186 Identities=15% Similarity=0.133 Sum_probs=87.6
Q ss_pred ccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEE-ecCCeEeEEEEec
Q 043502 612 LGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFV-SKNGRLLQFTVAL 690 (949)
Q Consensus 612 ~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~v-t~~GrLlq~tva~ 690 (949)
+...++.||+.+.+|.|+.=.-..-...|.--. ..+.+. .+..++++|++ +.||+|+-+-...
T Consensus 5 P~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~-----------p~~~~g~~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 5 VTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQV-----------PTHVEEPAFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp ---CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCC-----------C-----CCEEECTTTCCEEEC----
T ss_pred CeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceec-----------ceEcCCCEEEEeCCCCEEEEEECCC
Confidence 344678888888888887766556667786542 122222 23356777777 7899998876655
Q ss_pred eeeeeecCCCCCCcceEEeecccccccCeEEEEccCceEeeecC--ceeeeeecCCCCceeeecCCCceecCCCCCCcce
Q 043502 691 RKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQYNK--VTELWHEHYQSQHLVLSILPGTAMRPPSASLTGS 768 (949)
Q Consensus 691 rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEwNg--~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gs 768 (949)
++..|+-....++ .+.. .+.+..+++||+.+.+|+||-++- +...|.-..... . .+.| ..+.
T Consensus 69 G~~~w~~~~~~~~-~~~~--sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~------~~~p----~~~~ 132 (369)
T 2hz6_A 69 NEGLTKLPFTIPE-LVQA--SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---D------SLSP----STSL 132 (369)
T ss_dssp -CCSEECSCCHHH-HHTT--CSCC-----CCCCEEEEEEEEECCC-----------------------------------
T ss_pred CceeeeeeccCcc-cccc--CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---c------cccc----cCCE
Confidence 5444432221111 1111 123325678898899999999753 456676543211 1 1112 3457
Q ss_pred EEEEecCCCeEEEEEeCCC---CeEEeecCCCCCCceeecCCCCccc-----CceEEEEecCCceEEEEEeC---C-cce
Q 043502 769 LFMLSEDGGLVEYHWNTWD---GWNWVEHGTPGKGVTLVGSPGPCLH-----GNQLLLIGSDGKVYLRYMDQ---M-TWR 836 (949)
Q Consensus 769 lFm~~snG~LyEr~Wntg~---gW~WVdHGtP~~gvtvv~spG~sf~-----gsqLFviGSDG~LYeRywdg---~-tWt 836 (949)
+|+.+.||.|+= |+..+ -|+.-.++. ..+++. ++++|+...||.+|- ++- . -|+
T Consensus 133 v~~~~~dg~v~a--~d~~tG~~~W~~~~~~~----------~~~~~~~~~~~~~~v~~~~~dg~v~a--~d~~tG~~~W~ 198 (369)
T 2hz6_A 133 LYLGRTEYTITM--YDTKTRELRWNATYFDY----------AASLPEDDVDYKMSHFVSNGDGLVVT--VDSESGDVLWI 198 (369)
T ss_dssp EEEEEEEEEEEC--CCSSSSSCCCEEEEEEE----------CCBCCCCCTTCCCCEEEEETSCEEEE--ECTTTCCEEEE
T ss_pred EEEEecCCEEEE--EECCCCCEEEeEecccc----------cCccccCCccccceEEEECCCCEEEE--EECCCCcEEEE
Confidence 888888888764 55433 266433221 112222 378999888998764 552 2 344
Q ss_pred eeecCCCC
Q 043502 837 WKNCGFPH 844 (949)
Q Consensus 837 W~NhG~P~ 844 (949)
.. .+.|.
T Consensus 199 ~~-~~~pv 205 (369)
T 2hz6_A 199 QN-YASPV 205 (369)
T ss_dssp EE-CSSCE
T ss_pred ec-CCCce
Confidence 32 55563
No 14
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.64 E-value=0.9 Score=44.47 Aligned_cols=100 Identities=13% Similarity=0.072 Sum_probs=55.2
Q ss_pred cccccceEEEec-cCcEEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEece
Q 043502 613 GNYNGSLYMVDL-YGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALR 691 (949)
Q Consensus 613 g~~ngsLf~vd~-~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~r 691 (949)
|..++.+++.|. .|.+.=+.-.+.. ...++ ..++.++.+++ +.+++++.+.- ..
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~----------------------~~~~pdG~ilv-s~~~~V~~~d~-~G 65 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKG-WECNS----------------------VAATKAGEILF-SYSKGAKMITR-DG 65 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTT-CCCCE----------------------EEECTTSCEEE-ECBSEEEEECT-TS
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCcc-CCCcC----------------------eEECCCCCEEE-eCCCCEEEECC-CC
Confidence 457899999999 9998755543221 11111 12344555555 44555555444 44
Q ss_pred eeeeecCCCCCCcceEEeecccccccCeEEEEcc-CceEeeec-Cceeeee
Q 043502 692 KFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR-NGRLYQYN-KVTELWH 740 (949)
Q Consensus 692 kwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~-NGrLYEwN-g~TW~Wh 740 (949)
+..|.-.. |.+..+.++ +.+-+++.+++... |+++++++ .+..+|.
T Consensus 66 ~~~W~~~~-~~~~~~~~~--~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~ 113 (276)
T 3no2_A 66 RELWNIAA-PAGCEMQTA--RILPDGNALVAWCGHPSTILEVNMKGEVLSK 113 (276)
T ss_dssp CEEEEEEC-CTTCEEEEE--EECTTSCEEEEEESTTEEEEEECTTSCEEEE
T ss_pred CEEEEEcC-CCCcccccc--EECCCCCEEEEecCCCCEEEEEeCCCCEEEE
Confidence 45554332 222334333 34556666666666 89999954 4555555
No 15
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=95.23 E-value=0.64 Score=47.60 Aligned_cols=213 Identities=15% Similarity=0.176 Sum_probs=108.0
Q ss_pred EEEEEEe--ceeeehhccCceEEEecCCCCcceEEEe-ecccccccccccccccee-EeecceeecCCcEEEEEecCCce
Q 043502 175 ISVFIVN--QRILALAEAGVLYQMQLGDNSQPIWVEF-IPAIDQSINGEAEQRSVI-QIKSGVVSQDGERVYFCTKNGLL 250 (949)
Q Consensus 175 i~vfivn--~tilalseag~lyqmql~e~sqpiw~ef-~~~~~~~~~~~~~qs~~~-~ik~gvvs~dg~~lff~~knG~L 250 (949)
+.+|+.| +.||..+..|.+|++...|-..--|... .|-.+-+.+.+.++=-++ .++. -.+...|+|+|++|..
T Consensus 45 ~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~---~~~~~~ll~~T~~G~~ 121 (307)
T 1zi0_A 45 DRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTE---FEEGVKVFMATANGTV 121 (307)
T ss_dssp EEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESC---CCTTCEEEEEETTSEE
T ss_pred EEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCCCCCEEEEEEEecc---CCCCcEEEEEeCCCeE
Confidence 4566665 5799999999999997665322222211 010111112222221111 2211 1356789999999988
Q ss_pred eEe--eccCCCc---cccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhccccccccccccccCc
Q 043502 251 LEL--SEVEPPR---WLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSM 325 (949)
Q Consensus 251 Le~--tel~p~r---W~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~ 325 (949)
-.. .|++..+ ..-..-..|-.+..+.-... .+-|+.++++|+++.|+-..-|.-.+--.--.. ..|. .
T Consensus 122 Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~--~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~---i~L~--~ 194 (307)
T 1zi0_A 122 KKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSG--EDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRG---IRLG--E 194 (307)
T ss_dssp EEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECT--TCEEEEEETTSEEEEEEGGGSCBCCTTCCCEEC---CCCC--T
T ss_pred EEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCC--CCEEEEECCCCcEEEEEHHHcCccCCCCCCeEe---EEeC--C
Confidence 554 4666543 11111223444443332211 245788999999999976554444331111100 0111 1
Q ss_pred ccccccc--cCCceeeEEEEecCCcEE-----EEEeeccc-eeEEEcC-CCCCCcccccceeccCCccccceEEEEEccc
Q 043502 326 ACTLHGL--IGDHSTSLFLLTKGGNLV-----ERRIQQRK-WKWIIHG-SPEDTHLTSITPVQQDESNEKFFSLFLTTSA 396 (949)
Q Consensus 326 g~t~~gl--~g~~S~SLFlltk~G~LV-----Err~~qrk-WkWi~HG-tP~~~~l~siT~v~~d~~~~~~~sLF~t~S~ 396 (949)
+-.+.++ ..+ .-.|+++|+.|..- ||+...|+ +-=+..- +.+.+.|-.+..+.. . -.|+++|++
T Consensus 195 ~d~Vv~~~~~~~-~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~---~---~~l~~~t~~ 267 (307)
T 1zi0_A 195 GDKVVSLIVPRG-DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDD---C---DQIMMITDA 267 (307)
T ss_dssp TCCEEEEECCCS-SCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECT---T---CEEEEEESS
T ss_pred CCEEEEEEEecC-CCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCC---C---ceEEEEcCC
Confidence 1111111 111 12589999988743 55545442 3211111 222255554444422 1 359999999
Q ss_pred ceEEEEee
Q 043502 397 GAVFEYQI 404 (949)
Q Consensus 397 G~Vyey~~ 404 (949)
|++.++..
T Consensus 268 g~~ir~~~ 275 (307)
T 1zi0_A 268 GTLVRTRV 275 (307)
T ss_dssp CCEEEEEG
T ss_pred CcEEEEec
Confidence 99998888
No 16
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.94 E-value=0.67 Score=45.36 Aligned_cols=110 Identities=9% Similarity=0.103 Sum_probs=64.0
Q ss_pred ceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEeeccCCCcc
Q 043502 182 QRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELSEVEPPRW 261 (949)
Q Consensus 182 ~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~tel~p~rW 261 (949)
+.|++-|+.+.+|=+. .++-+.+|.-=.+.. ..+.+-.++.||+.|+ +-++.+.++..--++.|
T Consensus 6 ~~lv~~~~~~~v~~~d-~~tG~~~w~~~~~~~-------------~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W 69 (276)
T 3no2_A 6 HLLVGGSGWNKIAIIN-KDTKEIVWEYPLEKG-------------WECNSVAATKAGEILF--SYSKGAKMITRDGRELW 69 (276)
T ss_dssp EEEEECTTCSEEEEEE-TTTTEEEEEEECCTT-------------CCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEE
T ss_pred cEEEeeCCCCEEEEEE-CCCCeEEEEeCCCcc-------------CCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEE
Confidence 4566677788887554 335667776322110 1123334667786444 45667777776566777
Q ss_pred ccCCCCCCCceeEEeeccccCC-ceEEEEcc-CCceeeeccCCchhhhhhcc
Q 043502 262 LNHGRPPGANVAAIADAGNVRP-EVVYTISS-TGDLYEYDRISKPSWRKHIW 311 (949)
Q Consensus 262 ~~hg~PPga~VA~I~D~~~~R~-~vVftiss-~GdLYeYnr~tkpsW~kHiw 311 (949)
+... |.+..+. ++..... +++++-+. ++++|++|+.-+-+|+--+.
T Consensus 70 ~~~~-~~~~~~~---~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~ 117 (276)
T 3no2_A 70 NIAA-PAGCEMQ---TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFE 117 (276)
T ss_dssp EEEC-CTTCEEE---EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEEC
T ss_pred EEcC-CCCcccc---ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEecc
Confidence 7653 2222232 2222332 45666565 89999999988877775543
No 17
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.70 E-value=3 Score=45.63 Aligned_cols=163 Identities=15% Similarity=0.159 Sum_probs=88.8
Q ss_pred CceEEEEeeCCeeEEEEecCCEEEEEec--CCC--CCccccccccccceEEEec------cCcEEEEEecCCCceeeecc
Q 043502 575 SRSFFLITDGGFTFEYLYAESVWLWLRH--DHS--TPMRGVLGNYNGSLYMVDL------YGSLLIRERSSNELAWINCT 644 (949)
Q Consensus 575 ~~s~fliTd~G~~fE~~~~~~~WlWl~H--~h~--T~m~g~~g~~ngsLf~vd~------~GsL~~R~~~g~~~~W~n~t 644 (949)
+.++|+.|.||.+|-.=-..+.=+|-.. +++ -.+..++-.+++.||+... +|.|.--.-..-...|.-.+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 5688888888888765444565556432 211 1334445457788887765 67777777666677786654
Q ss_pred CCCCCc----------ee-------------------ecCCCCCCCCCcceeec-ccCcEEEEecCC-------------
Q 043502 645 AMRKGR----------QV-------------------IGGPPWDGITGKAMKVT-AEDALFFVSKNG------------- 681 (949)
Q Consensus 645 ~mr~G~----------~V-------------------~~G~pwdgipG~~~~vt-~~dklF~vt~~G------------- 681 (949)
.-+..+ .+ -+|.+|. .+-+. ..+.+|+.+.+.
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~-----~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWG-----WYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCS-----CCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeee-----eEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 322100 00 1122332 11111 245778877542
Q ss_pred ---eEeEEEEeceeeeeecCCCCCCcceE-Eeeccccc----cc---CeEEEEccCceEeeec--Cceeeeeec
Q 043502 682 ---RLLQFTVALRKFKWKDCRHPLDTKVA-CIVDQELF----RE---NIVFVVGRNGRLYQYN--KVTELWHEH 742 (949)
Q Consensus 682 ---rLlq~tva~rkwkW~dhg~PPgTkIa-ta~d~~~~----r~---~~iFvvG~NGrLYEwN--g~TW~WhdH 742 (949)
.|+-+-..+.+.+|+..-.|.+.+-. ....+.++ .+ +.+++..+||.||-.+ .+..+|...
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 35555556788889876555333210 00112222 22 2467788999999954 345667643
No 18
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.65 E-value=0.24 Score=52.32 Aligned_cols=121 Identities=10% Similarity=0.045 Sum_probs=75.2
Q ss_pred ccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEE--ecCCeEeEEEEeceee
Q 043502 616 NGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFV--SKNGRLLQFTVALRKF 693 (949)
Q Consensus 616 ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~v--t~~GrLlq~tva~rkw 693 (949)
++.||+.+.||.|+--....-+..|.--+. ....++... -|.. ..++.++++ +.||+||.+....+.+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~----~~~~----~~~~~~~vv~p~~dG~l~a~~~~~G~~ 79 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQ----EPSR----LETYETLIIEPFGDGNIYYFNAHQGLQ 79 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECC----CSCT----TTSSEEEEECCSTTTEEEEEETTTEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEec----CCcc----ccCCcEEEEEECCCCEEEEEECCCCcE
Confidence 578999999999999998888999987544 101122210 0111 146678888 6899999988777778
Q ss_pred eeecCCCCCCcceEEee-c-cccc-------ccCeEEEEccCceEeee--cCceeeeee-cCCCCc
Q 043502 694 KWKDCRHPLDTKVACIV-D-QELF-------RENIVFVVGRNGRLYQY--NKVTELWHE-HYQSQH 747 (949)
Q Consensus 694 kW~dhg~PPgTkIata~-d-~~~~-------r~~~iFvvG~NGrLYEw--Ng~TW~Whd-HGkP~~ 747 (949)
+|.. ..|.-+.+.-+. + +-++ .+++||++++||+||-. ..+...|.- -+.|.+
T Consensus 80 ~~~~-~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~ 144 (339)
T 2be1_A 80 KLPL-SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNG 144 (339)
T ss_dssp EEEE-EHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC
T ss_pred Eeee-ccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcc
Confidence 8843 122111111011 1 1123 68899999999999993 346666764 345544
No 19
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.60 E-value=1.1 Score=49.96 Aligned_cols=128 Identities=14% Similarity=0.237 Sum_probs=78.7
Q ss_pred ccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecCCCCCC-CCCcceeecccCcEEEEecCCeEeEEEE
Q 043502 610 GVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDG-ITGKAMKVTAEDALFFVSKNGRLLQFTV 688 (949)
Q Consensus 610 g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdg-ipG~~~~vt~~dklF~vt~~GrLlq~tv 688 (949)
+++-..+|.||+.+.+|.|+-=.-..-...|.--...+.......- .+. -.|.+. .++.+|+.+.+|+|+-+-.
T Consensus 71 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~--~~~~~~~~a~---~~~~v~v~~~dg~l~alD~ 145 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGC--CDVVNRGVAL---WKGKVYVGAWDGRLIALDA 145 (677)
T ss_dssp CCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSS--SCSCCCCCEE---ETTEEEEECTTSEEEEEET
T ss_pred eCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccc--ccCCCCCceE---ECCEEEEEcCCCEEEEEEC
Confidence 4444578888888888888776666666778765443221110000 000 123343 6889999999999998887
Q ss_pred eceeeeeecCCC---CCCcceEEeecccccccCeEEEEcc------CceEeeec--CceeeeeecCCC
Q 043502 689 ALRKFKWKDCRH---PLDTKVACIVDQELFRENIVFVVGR------NGRLYQYN--KVTELWHEHYQS 745 (949)
Q Consensus 689 a~rkwkW~dhg~---PPgTkIata~d~~~~r~~~iFvvG~------NGrLYEwN--g~TW~WhdHGkP 745 (949)
.+.+..|+.... +.+..+..+ +.+. +++||+.+. +|.||-++ .+..+|.-+..|
T Consensus 146 ~tG~~~W~~~~~~~~~~~~~~~~~--p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~ 210 (677)
T 1kb0_A 146 ATGKEVWHQNTFEGQKGSLTITGA--PRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVP 210 (677)
T ss_dssp TTCCEEEEEETTTTCCSSCBCCSC--CEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred CCCCEEeeecCCcCcCcCcccccC--cEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCC
Confidence 788888876532 222223222 3344 568888765 79999965 356667665533
No 20
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.54 E-value=2.3 Score=47.45 Aligned_cols=166 Identities=13% Similarity=0.152 Sum_probs=90.0
Q ss_pred eEEEEeeCCeeEEEEecCCEEEEEec--CC--CCCccccccccccceEEEe------ccCcEEEEEecCCCceeeeccCC
Q 043502 577 SFFLITDGGFTFEYLYAESVWLWLRH--DH--STPMRGVLGNYNGSLYMVD------LYGSLLIRERSSNELAWINCTAM 646 (949)
Q Consensus 577 s~fliTd~G~~fE~~~~~~~WlWl~H--~h--~T~m~g~~g~~ngsLf~vd------~~GsL~~R~~~g~~~~W~n~t~m 646 (949)
.+|+.|.||.++-.=-..+.=+|-.. ++ .-.+.+++-..+|.||+.. .+|.|+--.-..-.++|.-.+.-
T Consensus 123 rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 123 LILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 38888888887764333454455432 11 0133444545677777765 36777766666667778766442
Q ss_pred CCCc----------------eeecCCCCCC----CCCc----ceee-cccCcEEEEecCC----------------eEeE
Q 043502 647 RKGR----------------QVIGGPPWDG----ITGK----AMKV-TAEDALFFVSKNG----------------RLLQ 685 (949)
Q Consensus 647 r~G~----------------~V~~G~pwdg----ipG~----~~~v-t~~dklF~vt~~G----------------rLlq 685 (949)
+... ...+-+.|.| +.|. .+-+ ...+.+|+.+-++ .|+-
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 2100 0011122221 0010 1111 1456788888764 6666
Q ss_pred EEEeceeeeeecCCCCCCcceE------Eeeccccccc---CeEEEEccCceEeeec--Cceeeeeec
Q 043502 686 FTVALRKFKWKDCRHPLDTKVA------CIVDQELFRE---NIVFVVGRNGRLYQYN--KVTELWHEH 742 (949)
Q Consensus 686 ~tva~rkwkW~dhg~PPgTkIa------ta~d~~~~r~---~~iFvvG~NGrLYEwN--g~TW~WhdH 742 (949)
+-..+.+.+|+....|.+.|-- .+.|....++ +.+++.++||.||-.+ .+..+|...
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 6667889999988877665511 1111111223 3466678999999944 345567654
No 21
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.51 E-value=1.9 Score=43.55 Aligned_cols=157 Identities=10% Similarity=0.172 Sum_probs=79.2
Q ss_pred ccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecc--cCcEEEEecCC----eEeEEEEe
Q 043502 616 NGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTA--EDALFFVSKNG----RLLQFTVA 689 (949)
Q Consensus 616 ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~--~dklF~vt~~G----rLlq~tva 689 (949)
.+.||+....| |+++.-.+..-.|........+.. |- ++-+.. ++.+|+++..| .||..+=.
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~---------v~--~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~ 89 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHT---------IH--HIVQDPREPERMLMAARTGHLGPTVFRSDDG 89 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSE---------EE--EEEECSSSTTCEEEEEEC--CCEEEEEESST
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCc---------eE--EEEECCCCCCeEEEEecCCCCCccEEEeCCC
Confidence 57888888888 555444332235554321011111 11 122222 56788888887 66654333
Q ss_pred ceeeeeecCCC----CCCc---------ce-EEeecccccc-cCeEEEEccCceEeeecCceeeeeecC----CCC----
Q 043502 690 LRKFKWKDCRH----PLDT---------KV-ACIVDQELFR-ENIVFVVGRNGRLYQYNKVTELWHEHY----QSQ---- 746 (949)
Q Consensus 690 ~rkwkW~dhg~----PPgT---------kI-ata~d~~~~r-~~~iFvvG~NGrLYEwNg~TW~WhdHG----kP~---- 746 (949)
+. +|..... |+.. .| +.++++ -+ .+++|+++.+|.||..+....+|.... .|.
T Consensus 90 G~--tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~--~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~ 165 (394)
T 3b7f_A 90 GG--NWTEATRPPAFNKAPEGETGRVVDHVFWLTPGH--ASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAW 165 (394)
T ss_dssp TS--CCEECSBCCCCCCCC----CCCCCEEEEEEECC--TTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHH
T ss_pred CC--CceECCccccCCCcccccccccccceeEEEeCC--CCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCcccccc
Confidence 33 3443332 2221 23 122222 22 678999999999999443333444321 121
Q ss_pred ----------ceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecC
Q 043502 747 ----------HLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHG 795 (949)
Q Consensus 747 ----------~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHG 795 (949)
...+. +|.-. ..-...+++.+.+|+||. .-+.|..|.=+..+
T Consensus 166 ~~~~~~g~~~~~~i~-----~i~~d-~~~~~~l~vg~~~ggl~~-s~DgG~tW~~~~~~ 217 (394)
T 3b7f_A 166 TGGEQDGTPDGPKMH-----SILVD-PRDPKHLYIGMSSGGVFE-STDAGTDWKPLNRG 217 (394)
T ss_dssp HCCC----CCCCEEE-----EEEEC-TTCTTCEEEEEETBEEEE-ESSTTSSCEECCTT
T ss_pred ccccccCCCCCCcee-----EEEEC-CCCCCEEEEEECCCCEEE-ECCCCCCceECCCC
Confidence 11111 12211 112456888888888885 55667788766555
No 22
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.28 E-value=0.93 Score=50.46 Aligned_cols=119 Identities=13% Similarity=0.204 Sum_probs=76.6
Q ss_pred cCceEEEEeeCCeeEEEEecCCEEEEEecCCCCC----------ccccccccccceEEEeccCcEEEEEecCCCceeeec
Q 043502 574 GSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTP----------MRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINC 643 (949)
Q Consensus 574 ~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~----------m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~ 643 (949)
.+..+|+.|.+|.+|=.=-..+.=+|-..-.... ....+..+++.||+...+|.|.--.-..-...|.--
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 3578999999888776544566667754332211 123345588999999999999988876677788765
Q ss_pred cC-CCCCceeecCCCCCCCCCcceeecccCcEEEEec------CCeEeEEEEeceeeeeecCCCCC
Q 043502 644 TA-MRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSK------NGRLLQFTVALRKFKWKDCRHPL 702 (949)
Q Consensus 644 t~-mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~------~GrLlq~tva~rkwkW~dhg~PP 702 (949)
.. -.+...-+.+ .. +..++.+|+.+. +|.|+-+-..+++..|+-...|+
T Consensus 156 ~~~~~~~~~~~~~--------~p--~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~ 211 (677)
T 1kb0_A 156 TFEGQKGSLTITG--------AP--RVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPG 211 (677)
T ss_dssp TTTTCCSSCBCCS--------CC--EEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCC
T ss_pred CCcCcCcCccccc--------Cc--EEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCC
Confidence 43 1111111111 11 124788888875 68898888888888887665443
No 23
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.20 E-value=4.3 Score=39.32 Aligned_cols=215 Identities=15% Similarity=0.148 Sum_probs=110.6
Q ss_pred eEEEEeeCCeeEEEEecCCEEEEEecCCC--CCcccccc-ccccceEEEecc-----C---cEE--EEEecCCCceeeec
Q 043502 577 SFFLITDGGFTFEYLYAESVWLWLRHDHS--TPMRGVLG-NYNGSLYMVDLY-----G---SLL--IRERSSNELAWINC 643 (949)
Q Consensus 577 s~fliTd~G~~fE~~~~~~~WlWl~H~h~--T~m~g~~g-~~ngsLf~vd~~-----G---sL~--~R~~~g~~~~W~n~ 643 (949)
.+|++-. ..++-|=-..+.|. .-..| .|..+... .++++||+..-. + .+. +-..+-..-.|...
T Consensus 6 ~l~~~GG-~~~~~yd~~~~~W~--~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 6 LIFMISE-EGAVAYDPAANECY--CASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEEET-TEEEEEETTTTEEE--EEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred EEEEEcC-CceEEECCCCCeEe--cCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 3444433 34444444566765 23333 34444433 389999998762 2 111 23345566679888
Q ss_pred cCCCCCceeecCCCCCCCCCcceeecccCcEEEEecC-----CeEeE--EEEeceeeeeecCCCCCCcceEEeecccccc
Q 043502 644 TAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKN-----GRLLQ--FTVALRKFKWKDCRHPLDTKVACIVDQELFR 716 (949)
Q Consensus 644 t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~-----GrLlq--~tva~rkwkW~dhg~PPgTkIata~d~~~~r 716 (949)
+.|+..|. + .++ +..++++|+..-. +..+. +......-+|......|...-..+ ...+
T Consensus 83 ~~~p~~r~---~------~~~---~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~--~~~~- 147 (315)
T 4asc_A 83 PPLPSPRC---L------FGL---GEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT--VLSH- 147 (315)
T ss_dssp CCBSSCEE---S------CEE---EEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE--EEEE-
T ss_pred CCCCcchh---c------eeE---EEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee--EEEE-
Confidence 88776543 1 122 2358888887641 22222 222444456777665554443222 2234
Q ss_pred cCeEEEEccC-------ceEeeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecC-CC----eEEEEEe
Q 043502 717 ENIVFVVGRN-------GRLYQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSED-GG----LVEYHWN 784 (949)
Q Consensus 717 ~~~iFvvG~N-------GrLYEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~sn-G~----LyEr~Wn 784 (949)
+++||+.|.. ..++.|+-.+..|..-...+... .+.++.. +.+++|+.+-. +. -.|.| +
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~----~~~~iyv~GG~~~~~~~~~~~~y-d 218 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR----SLFGATV----HDGRIIVAAGVTDTGLTSSAEVY-S 218 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC----BSCEEEE----ETTEEEEEEEECSSSEEEEEEEE-E
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch----hceEEEE----ECCEEEEEeccCCCCccceEEEE-E
Confidence 4577777653 23777998899998865333221 1122221 24568877542 21 23333 3
Q ss_pred CCCCeEEeecCCCCCCceeecCCCCcccCceEEEEecC
Q 043502 785 TWDGWNWVEHGTPGKGVTLVGSPGPCLHGNQLLLIGSD 822 (949)
Q Consensus 785 tg~gW~WVdHGtP~~gvtvv~spG~sf~gsqLFviGSD 822 (949)
..+ -.|..-..++.+.. ....+..+++||++|+.
T Consensus 219 ~~~-~~W~~~~~~p~~r~---~~~~~~~~~~l~v~GG~ 252 (315)
T 4asc_A 219 ITD-NKWAPFEAFPQERS---SLSLVSLVGTLYAIGGF 252 (315)
T ss_dssp TTT-TEEEEECCCSSCCB---SCEEEEETTEEEEEEEE
T ss_pred CCC-CeEEECCCCCCccc---ceeEEEECCEEEEECCc
Confidence 222 24555443322211 22234557899999873
No 24
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.99 E-value=6.4 Score=43.34 Aligned_cols=168 Identities=15% Similarity=0.165 Sum_probs=84.6
Q ss_pred CceEEEEeeCCeeEEEEecCCEEEEEecCCC----CCcccccccccc------ceEEEe------ccCcEEEEEecCCCc
Q 043502 575 SRSFFLITDGGFTFEYLYAESVWLWLRHDHS----TPMRGVLGNYNG------SLYMVD------LYGSLLIRERSSNEL 638 (949)
Q Consensus 575 ~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~----T~m~g~~g~~ng------sLf~vd------~~GsL~~R~~~g~~~ 638 (949)
+..+|+.|.+|.++-.=-..+.=+|-..-.. ..+.+++-.+++ .||+.. .+|.|+--....-.+
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 4678899988888765444554455432211 123333333445 555543 356666666555566
Q ss_pred eeeeccCC----CCCcee------ecCCCCCCC-------------CC----cceeec-ccCcEEEEecC----------
Q 043502 639 AWINCTAM----RKGRQV------IGGPPWDGI-------------TG----KAMKVT-AEDALFFVSKN---------- 680 (949)
Q Consensus 639 ~W~n~t~m----r~G~~V------~~G~pwdgi-------------pG----~~~~vt-~~dklF~vt~~---------- 680 (949)
+|.....- +.+.++ .+.+.|++- .| ..+.+. ..+.+|+.+-|
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 77543210 001111 012223321 00 012222 24667777732
Q ss_pred --------------CeEeEEEEeceeeeeecCCCCCCcceE-Eeeccccc-----cc---CeEEEEccCceEeeecC--c
Q 043502 681 --------------GRLLQFTVALRKFKWKDCRHPLDTKVA-CIVDQELF-----RE---NIVFVVGRNGRLYQYNK--V 735 (949)
Q Consensus 681 --------------GrLlq~tva~rkwkW~dhg~PPgTkIa-ta~d~~~~-----r~---~~iFvvG~NGrLYEwNg--~ 735 (949)
+.|+-+-..+.+.+|+..-.|.+.+-- ....+.+. .+ +.+|+.++||.||-.+. +
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 466666667888999875555443310 00111221 22 36888899999999553 3
Q ss_pred eeeeeec
Q 043502 736 TELWHEH 742 (949)
Q Consensus 736 TW~WhdH 742 (949)
..+|...
T Consensus 357 ~~lw~~~ 363 (582)
T 1flg_A 357 KLQNAFP 363 (582)
T ss_dssp CEEEEEE
T ss_pred CEecccc
Confidence 4556543
No 25
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.72 E-value=3.4 Score=40.55 Aligned_cols=191 Identities=13% Similarity=0.209 Sum_probs=97.2
Q ss_pred CCCCccccccc-cccceEEEe-ccCcEEEEEecC-CCceeeeccCCC-CCceeecCCCCCCCCCcceeecccCcEEEEec
Q 043502 604 HSTPMRGVLGN-YNGSLYMVD-LYGSLLIRERSS-NELAWINCTAMR-KGRQVIGGPPWDGITGKAMKVTAEDALFFVSK 679 (949)
Q Consensus 604 h~T~m~g~~g~-~ngsLf~vd-~~GsL~~R~~~g-~~~~W~n~t~mr-~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~ 679 (949)
.|.|..+..++ ++++||+.. .+++=..++--. ..-.|...+.|+ ..|. +.++ +..+++||+..-
T Consensus 6 lP~~r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~-----------~~~~-~~~~~~lyv~GG 73 (357)
T 2uvk_A 6 TPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRD-----------QATS-AFIDGNLYVFGG 73 (357)
T ss_dssp CSSCCCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCB-----------SCEE-EEETTEEEEECC
T ss_pred CCccccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCc-----------cceE-EEECCEEEEEcC
Confidence 35677776665 599999986 334433444332 246788887776 3431 1222 336888998753
Q ss_pred C-----------CeEeEEEEeceeeeeecCCCCC-CcceEEeecccccccCeEEEEc-cC--------------------
Q 043502 680 N-----------GRLLQFTVALRKFKWKDCRHPL-DTKVACIVDQELFRENIVFVVG-RN-------------------- 726 (949)
Q Consensus 680 ~-----------GrLlq~tva~rkwkW~dhg~PP-gTkIata~d~~~~r~~~iFvvG-~N-------------------- 726 (949)
. ..++.+ ....-+|...-..+ -..-..+ .... +++||+.| .+
T Consensus 74 ~~~~~~~~~~~~~~v~~y--d~~~~~W~~~~~~~p~~r~~~~--~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
T 2uvk_A 74 IGKNSEGLTQVFNDVHKY--NPKTNSWVKLMSHAPMGMAGHV--TFVH-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTA 148 (357)
T ss_dssp EEECTTSCEEECCCEEEE--ETTTTEEEECSCCCSSCCSSEE--EEEE-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCCCccceeeccEEEE--eCCCCcEEECCCCCCcccccce--EEEE-CCEEEEEeCcCCCcCcccccchhhcCCcccc
Confidence 2 123333 34444555543322 2222211 1234 44666665 33
Q ss_pred -------------------ceEeeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEec-------CCCeEE
Q 043502 727 -------------------GRLYQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSE-------DGGLVE 780 (949)
Q Consensus 727 -------------------GrLYEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~s-------nG~LyE 780 (949)
..++.|+-.+..|..-...+... ..+.++.- +.+++|+.+- ...++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~---~~~~~~~~----~~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 149 IDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYG---TAGAAVVN----KGDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp HHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCC---CBSCEEEE----ETTEEEEECCEEETTEECCCEEE
T ss_pred hhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCC---cccccEEE----ECCEEEEEeeecCCCcccCceEE
Confidence 35777999988998775333211 11233332 2456888853 234555
Q ss_pred EEEe-CCCCeEEeecCCCCCCceeecCCCCcccCceEEEEec
Q 043502 781 YHWN-TWDGWNWVEHGTPGKGVTLVGSPGPCLHGNQLLLIGS 821 (949)
Q Consensus 781 r~Wn-tg~gW~WVdHGtP~~gvtvv~spG~sf~gsqLFviGS 821 (949)
+-.+ ....|.-+.-- |. +.... ....+..+++|||+|+
T Consensus 222 ~d~d~~~~~W~~~~~~-~~-~~~~~-~~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPV-SS-PDGVA-GGFAGISNDSLIFAGG 260 (357)
T ss_dssp EECC---CEEEECCCS-ST-TTCCB-SCEEEEETTEEEEECC
T ss_pred EEecCCCCcEEecCCC-CC-Ccccc-cceEEEECCEEEEEcC
Confidence 5442 12345443221 21 11100 1113455789999997
No 26
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.44 E-value=2.1 Score=46.81 Aligned_cols=127 Identities=13% Similarity=0.175 Sum_probs=74.7
Q ss_pred ccccccccceEEEec-cCcEEEEEe-cCCCceeeeccCCCCCceeecCCCC-CC-CCCcceeecccCcEEEEecCCeEeE
Q 043502 610 GVLGNYNGSLYMVDL-YGSLLIRER-SSNELAWINCTAMRKGRQVIGGPPW-DG-ITGKAMKVTAEDALFFVSKNGRLLQ 685 (949)
Q Consensus 610 g~~g~~ngsLf~vd~-~GsL~~R~~-~g~~~~W~n~t~mr~G~~V~~G~pw-dg-ipG~~~~vt~~dklF~vt~~GrLlq 685 (949)
+++-..+|.||+.+. +|.|+-=.- ..-...|.--.....+ +.. .+. +. -.|.+. .++++|+.+.+|+|+-
T Consensus 56 ~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~--~~~-~~~~~~~~~~~~~---~~~~v~v~~~dg~l~a 129 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDAS--TKA-VMCCDVVDRGLAY---GAGQIVKKQANGHLLA 129 (571)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGG--GGG-GCTTCSCCCCCEE---ETTEEEEECTTSEEEE
T ss_pred cccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCcc--ccc-cccccccccccEE---ECCEEEEEeCCCEEEE
Confidence 334445777777777 677666554 4445567654332111 100 000 00 012333 6889999999999998
Q ss_pred EEEeceeeeeecC-CCC-CCcceEEeecccccccCeEEEEcc------CceEeeecC--ceeeeeecCCC
Q 043502 686 FTVALRKFKWKDC-RHP-LDTKVACIVDQELFRENIVFVVGR------NGRLYQYNK--VTELWHEHYQS 745 (949)
Q Consensus 686 ~tva~rkwkW~dh-g~P-PgTkIata~d~~~~r~~~iFvvG~------NGrLYEwNg--~TW~WhdHGkP 745 (949)
+-..+.+..|+.. +.+ .+..+.. .+.+. +++||+... +|.||-++- +..+|.-+-.+
T Consensus 130 lD~~tG~~~W~~~~~~~~~~~~~~~--~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~ 196 (571)
T 2ad6_A 130 LDAKTGKINWEVEVCDPKVGSTLTQ--APFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATG 196 (571)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCS--CCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EECCCCCEEEEecCCCCCccceecc--CCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCC
Confidence 8878888889743 222 2222222 23344 568888776 799999653 57788766544
No 27
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.18 E-value=0.76 Score=48.52 Aligned_cols=123 Identities=8% Similarity=0.031 Sum_probs=72.3
Q ss_pred CceEEEEeeCCeeEEEEecCCEEEEEecCC-CCCccccccc---cccceEEEe--ccCcEEEEEecCCCceeeeccCCCC
Q 043502 575 SRSFFLITDGGFTFEYLYAESVWLWLRHDH-STPMRGVLGN---YNGSLYMVD--LYGSLLIRERSSNELAWINCTAMRK 648 (949)
Q Consensus 575 ~~s~fliTd~G~~fE~~~~~~~WlWl~H~h-~T~m~g~~g~---~ngsLf~vd--~~GsL~~R~~~g~~~~W~n~t~mr~ 648 (949)
+..+|+.|.||.+|=.=-..|.=+|--... ..|+.++.+. .++.+|+++ .+|.|..=....-.+.| -..++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~--~~~~~- 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL--PLSIR- 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE--EEEHH-
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe--eeccc-
Confidence 467999999999987655678777865443 2455443221 466777775 58888654432223333 22322
Q ss_pred CceeecCCCCCCCCCcce-----eecccCcEEEEecCCeEeEEEEeceeeeeecC-CCCCC
Q 043502 649 GRQVIGGPPWDGITGKAM-----KVTAEDALFFVSKNGRLLQFTVALRKFKWKDC-RHPLD 703 (949)
Q Consensus 649 G~~V~~G~pwdgipG~~~-----~vt~~dklF~vt~~GrLlq~tva~rkwkW~dh-g~PPg 703 (949)
+.+..+|--+ .|... .++.++.+|+++++|+|+-.-...++..|.-- +.|.+
T Consensus 87 --~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~ 144 (339)
T 2be1_A 87 --QLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNG 144 (339)
T ss_dssp --HHHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC
T ss_pred --cceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcc
Confidence 2112222211 11111 12378999999999999999988888888753 44433
No 28
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=93.17 E-value=1.5 Score=45.77 Aligned_cols=236 Identities=17% Similarity=0.202 Sum_probs=116.2
Q ss_pred EEEEEEe--ceeeehhccCceEEEecCCCCcceEEEe-ecccccccccccccc-ceeEeecceeecCCcEEEEEecCCce
Q 043502 175 ISVFIVN--QRILALAEAGVLYQMQLGDNSQPIWVEF-IPAIDQSINGEAEQR-SVIQIKSGVVSQDGERVYFCTKNGLL 250 (949)
Q Consensus 175 i~vfivn--~tilalseag~lyqmql~e~sqpiw~ef-~~~~~~~~~~~~~qs-~~~~ik~gvvs~dg~~lff~~knG~L 250 (949)
+.+|..| +.||-++..|.+|++...|-..-=|... .|-.+-+...+.++= .++.+++ -.+...++|+|++|.+
T Consensus 45 ~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~---~~~e~~~v~~T~~G~i 121 (327)
T 3uc1_A 45 AHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRG---YTDAPYLVLATRNGLV 121 (327)
T ss_dssp EEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESS---TTSSSEEEEEETTSEE
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEecc---CCCCCEEEEEcCCCEE
Confidence 3455554 5699999999999996544322212211 111111222222222 2222221 1257899999999988
Q ss_pred eEee--ccCCCc---cccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccC--Cchhhhhhcccccccccccccc
Q 043502 251 LELS--EVEPPR---WLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRI--SKPSWRKHIWSKGTAANASLIP 323 (949)
Q Consensus 251 Le~t--el~p~r---W~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~--tkpsW~kHiws~~l~~~~sl~~ 323 (949)
-... +.+..+ ..--.-..|-.+..+.-.. -. +-|+.++++|++|.|+-. .=|.=.+- +.+. .-..|.
T Consensus 122 Kr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~-~~-d~ill~T~~G~~~rf~~~~~eip~~gr~--a~Gv-~~i~L~- 195 (327)
T 3uc1_A 122 KKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCS-AG-DDLLLVSANGQSIRFSATDEALRPMGRA--TSGV-QGMRFN- 195 (327)
T ss_dssp EEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEEC-TT-CEEEEEETTSEEEEEECCTTTSCCCCTT--SBCE-ESSCCC-
T ss_pred EEeEHHHhhccccCceEEEEECCCCEEEEEEEec-CC-CEEEEEECCCeEEEEECcccccCcCCcC--CCCe-eeecCC-
Confidence 7665 555443 1111122344443332221 12 457779999999999765 22210000 0010 000010
Q ss_pred Ccccccccc-cCCceeeEEEEecCCcEE-----EEEeecc-ceeEEEcCC-CCCCcccccceeccCCccccceEEEEEcc
Q 043502 324 SMACTLHGL-IGDHSTSLFLLTKGGNLV-----ERRIQQR-KWKWIIHGS-PEDTHLTSITPVQQDESNEKFFSLFLTTS 395 (949)
Q Consensus 324 s~g~t~~gl-~g~~S~SLFlltk~G~LV-----Err~~qr-kWkWi~HGt-P~~~~l~siT~v~~d~~~~~~~sLF~t~S 395 (949)
.+-.+.++ .-.-...|+|+|+.|..- ||+...| +---+..-. .+.+.|-.+.++.. . -.++++|+
T Consensus 196 -~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~---~---~~i~l~T~ 268 (327)
T 3uc1_A 196 -IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDD---D---SELYAVTS 268 (327)
T ss_dssp -TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECT---T---CEEEEEEG
T ss_pred -CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCC---C---ccEEEEcC
Confidence 00001000 001123699999998643 3444323 222232322 21344555544422 1 35999999
Q ss_pred cceEEEEeeccCCCCCccccccccccccCCCcccccccCCCCcccccce
Q 043502 396 AGAVFEYQIPKYSGTSQENQFSGGWISHLHPPHARAARGAVGLPFQVGR 444 (949)
Q Consensus 396 ~G~Vyey~~~k~tg~~q~nq~~~~W~sh~~P~~ak~a~~~~g~pfq~gr 444 (949)
.|++-++..... |.-...|.+++++-+.+|.
T Consensus 269 ~G~~ir~~~~~i------------------~~~gR~a~GV~~i~l~~~d 299 (327)
T 3uc1_A 269 GGGVIRTAARQV------------------RKAGRQTKGVRLMNLGEGD 299 (327)
T ss_dssp GGCEEEEEGGGS------------------CBCCTTSCCEECTTCCTTC
T ss_pred CCeEEEEehhhc------------------cccCCCCCCeEeEecCCCC
Confidence 999999988332 3334456677777776543
No 29
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=92.74 E-value=16 Score=41.50 Aligned_cols=146 Identities=8% Similarity=0.086 Sum_probs=73.0
Q ss_pred EEEEecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCC
Q 043502 569 LRVMHGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRK 648 (949)
Q Consensus 569 ~rvmh~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~ 648 (949)
+.+-..++.++..+.||.+.=+=...+....+. +|+.++....-.-++.|+....+|++.+-.-......
T Consensus 1009 l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~--------- 1078 (1249)
T 3sfz_A 1009 IQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ-AHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIE--------- 1078 (1249)
T ss_dssp EEECSSSSCEEEECSSSBEEEEETTTTEEECCB-CCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCC---------
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCceEEEe-cCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCcee---------
Confidence 344445566666777887765544555555433 4555554444446788888999998765332221111
Q ss_pred CceeecCCCCCCCCCcceeecccC-cEEEEecCCeEeEEEEeceee--eeecCCCCCCcceEEeecccccccCeEEEEcc
Q 043502 649 GRQVIGGPPWDGITGKAMKVTAED-ALFFVSKNGRLLQFTVALRKF--KWKDCRHPLDTKVACIVDQELFRENIVFVVGR 725 (949)
Q Consensus 649 G~~V~~G~pwdgipG~~~~vt~~d-klF~vt~~GrLlq~tva~rkw--kW~dhg~PPgTkIata~d~~~~r~~~iFvvG~ 725 (949)
+.+.+.. ..|- .+.+..++ .+..++.||.+.-+-....+. +...|..| =+.++.. + .++.+++.+.
T Consensus 1079 --~~~~~~~-~~v~--~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~-v~~~~~s--~---dg~~lat~~~ 1147 (1249)
T 3sfz_A 1079 --RDFTCHQ-GTVL--SCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGC-VRCSAFS--L---DGILLATGDD 1147 (1249)
T ss_dssp --EEEECCS-SCCC--CEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSC-EEEEEEC--S---SSSEEEEEET
T ss_pred --EEEcccC-CcEE--EEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCc-EEEEEEC--C---CCCEEEEEeC
Confidence 1111100 1111 22334444 355666777765444332221 22333222 1122222 2 3456777788
Q ss_pred CceEeeecCc
Q 043502 726 NGRLYQYNKV 735 (949)
Q Consensus 726 NGrLYEwNg~ 735 (949)
||.++-|+-.
T Consensus 1148 dg~i~vwd~~ 1157 (1249)
T 3sfz_A 1148 NGEIRIWNVS 1157 (1249)
T ss_dssp TSCCCEEESS
T ss_pred CCEEEEEECC
Confidence 9987776543
No 30
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=92.68 E-value=1.1 Score=46.86 Aligned_cols=203 Identities=15% Similarity=0.211 Sum_probs=118.7
Q ss_pred eeecCCcEEEEEecCCceeEee--ccCCCccccCCCC--------CCCceeEEeecccc-CCceEEEEccCCcee-----
Q 043502 233 VVSQDGERVYFCTKNGLLLELS--EVEPPRWLNHGRP--------PGANVAAIADAGNV-RPEVVYTISSTGDLY----- 296 (949)
Q Consensus 233 vvs~dg~~lff~~knG~LLe~t--el~p~rW~~hg~P--------Pga~VA~I~D~~~~-R~~vVftiss~GdLY----- 296 (949)
++......|.|.|.+|++..+. +|...+|...|.| +|.+|.++.-...| -...+++++++|-.-
T Consensus 48 ~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~ 127 (327)
T 3uc1_A 48 FVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLT 127 (327)
T ss_dssp EEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGG
T ss_pred EEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHH
Confidence 3445667789999999999998 7999999999976 89999998877766 456999999999653
Q ss_pred eeccCCchhhhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEee--c---cceeEEEcCC-----
Q 043502 297 EYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQ--Q---RKWKWIIHGS----- 366 (949)
Q Consensus 297 eYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~--q---rkWkWi~HGt----- 366 (949)
+|....+ +-+..=.+-+.-.+....-|. + .--|+|+|+.|.++=...+ + -++. -.|.
T Consensus 128 ~~~~~~r----~G~~~i~lke~D~lv~~~~~~-----~--~d~ill~T~~G~~~rf~~~~~eip~~gr~--a~Gv~~i~L 194 (327)
T 3uc1_A 128 DFDSNRS----GGIVAVNLRDNDELVGAVLCS-----A--GDDLLLVSANGQSIRFSATDEALRPMGRA--TSGVQGMRF 194 (327)
T ss_dssp GGCCCCS----SCEESCBCCTTCCEEEEEEEC-----T--TCEEEEEETTSEEEEEECCTTTSCCCCTT--SBCEESSCC
T ss_pred Hhhcccc----CceEEEEECCCCEEEEEEEec-----C--CCEEEEEECCCeEEEEECcccccCcCCcC--CCCeeeecC
Confidence 4433221 111111111122222222111 1 1259999999999855555 2 1211 1221
Q ss_pred CCCCcccccceeccCCccccceEEEEEcccceEEEEeeccCCCCCccccccccccccCCCc-ccccccCCCCcccccceE
Q 043502 367 PEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQIPKYSGTSQENQFSGGWISHLHPP-HARAARGAVGLPFQVGRT 445 (949)
Q Consensus 367 P~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~~~k~tg~~q~nq~~~~W~sh~~P~-~ak~a~~~~g~pfq~grv 445 (949)
.+++.+.++.++.. ...|++.|..|++.+-.+.+|.-.... ...-.....-+ +-+++. +..+. ..+.|
T Consensus 195 ~~~d~Vv~~~~~~~------~~~ll~~T~~G~~Krt~l~e~~~~~R~---~~G~~~~~l~~~~d~lv~-~~~~~-~~~~i 263 (327)
T 3uc1_A 195 NIDDRLLSLNVVRE------GTYLLVATSGGYAKRTAIEEYPVQGRG---GKGVLTVMYDRRRGRLVG-ALIVD-DDSEL 263 (327)
T ss_dssp CTTCCEEEEEECCT------TCEEEEEETTSEEEEEEGGGSCBCCTT---SCCEESSCCCTTTCSEEE-EEEEC-TTCEE
T ss_pred CCCCEEEEEEEECC------CCEEEEEeCCCcEEEEEHHHccccCcC---CCcEEEEEecCCCCeEEE-EEEeC-CCccE
Confidence 23455666666532 146999999999999999888622110 01111111111 111211 11111 34578
Q ss_pred EEEeCCCceeeccc
Q 043502 446 IFPLDDGRLAELHP 459 (949)
Q Consensus 446 iF~L~DGRLaELhl 459 (949)
++.-.+|++..+..
T Consensus 264 ~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 264 YAVTSGGGVIRTAA 277 (327)
T ss_dssp EEEEGGGCEEEEEG
T ss_pred EEEcCCCeEEEEeh
Confidence 88888998876654
No 31
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=92.40 E-value=2.7 Score=46.98 Aligned_cols=116 Identities=14% Similarity=0.197 Sum_probs=72.8
Q ss_pred cCceEEEEeeCCeeEEEEecCCEEEEEecCCCC----------CccccccccccceEEEeccCcEEEEEecCCCceeeec
Q 043502 574 GSRSFFLITDGGFTFEYLYAESVWLWLRHDHST----------PMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINC 643 (949)
Q Consensus 574 ~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T----------~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~ 643 (949)
.++.+|+.|.+|.+|=.=-..+.=+|-..-... .....+..+++.||+.+.+|+|.--.-..-...|.--
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 467899999888877543334555554322111 1223345588999999999999888776667788765
Q ss_pred cC-CCCCceeecCCCCCCCCCcceeecccCcEEEEec------CCeEeEEEEeceeeeeecCC
Q 043502 644 TA-MRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSK------NGRLLQFTVALRKFKWKDCR 699 (949)
Q Consensus 644 t~-mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~------~GrLlq~tva~rkwkW~dhg 699 (949)
.. -++...-+.+ .. +..++.+|+.+. +|+|+-+-..+.+..|+..-
T Consensus 149 ~~~~~~~~~~~~~--------sP--~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 149 TRADHKRSYTITG--------AP--RVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp CCSCTTSCCBCCS--------CC--EEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CcCCCCCCccccC--------Cc--EEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 42 1111111111 11 225788888763 78898888888888887653
No 32
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.12 E-value=7.5 Score=42.78 Aligned_cols=124 Identities=16% Similarity=0.309 Sum_probs=76.7
Q ss_pred cccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecCCCCCC-CCCcceeecccCcEEEEecCCeEeEEEEe
Q 043502 611 VLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDG-ITGKAMKVTAEDALFFVSKNGRLLQFTVA 689 (949)
Q Consensus 611 ~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdg-ipG~~~~vt~~dklF~vt~~GrLlq~tva 689 (949)
++-..+|.||+...++.|+-=.-..-...|.--...+.... +..+. -.|.+. .++++|+.+.+|+|+-+-..
T Consensus 63 ~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~----~~~~~~~~g~a~---~~~~v~~~t~dg~l~AlD~~ 135 (582)
T 1flg_A 63 QAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIR----PCCDVVNRGAAI---YGDKVFFGTLDASVVALNKN 135 (582)
T ss_dssp CCEEETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCC----CSSCSCCCCCEE---ETTEEEEEETTTEEEEEESS
T ss_pred ccEEECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccc----cccccCCCccEE---ECCEEEEEeCCCEEEEEECC
Confidence 34446888888888655665555555667876554333222 11111 134444 78999999999999998888
Q ss_pred ceeeeeecCCCCC--CcceEEeeccccccc----C-eEEEEc------cCceEeeecC--ceeeeeecC
Q 043502 690 LRKFKWKDCRHPL--DTKVACIVDQELFRE----N-IVFVVG------RNGRLYQYNK--VTELWHEHY 743 (949)
Q Consensus 690 ~rkwkW~dhg~PP--gTkIata~d~~~~r~----~-~iFvvG------~NGrLYEwNg--~TW~WhdHG 743 (949)
+.+..|+....++ +..+.. .+.+..+ + +||+.. .+|.||-++- +..+|..+.
T Consensus 136 TG~~~W~~~~~~~~~~~~~~~--sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~ 202 (582)
T 1flg_A 136 TGKVVWKKKFADHGAGYTMTG--APTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF 202 (582)
T ss_dssp SCCEEEEEECSCGGGTCBCCS--CCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES
T ss_pred CCCEEeeecCCCCCcCccccc--CCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCC
Confidence 8999998643332 112211 2334433 1 677754 4899999663 567897664
No 33
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=92.05 E-value=4.9 Score=41.22 Aligned_cols=111 Identities=8% Similarity=0.198 Sum_probs=60.9
Q ss_pred eceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccCC
Q 043502 181 NQRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVEP 258 (949)
Q Consensus 181 n~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~p 258 (949)
...++.||..|.+-.+.+.+-..+-=- .-.+..+.. ++.-..+. =++......|+|.|.+|++..|. ++++
T Consensus 8 e~~~v~~T~~G~iKr~~~~~~~~~~~~--~~g~~~~~l--ke~D~l~~---~~~~~~~~~ll~~T~~G~~~~~~~~~ip~ 80 (312)
T 1suu_A 8 ENIVVMLTKKGFLKRLSQNEYKLQGTG--GKGLSSFDL--NDGDEIVI---ALCVNTHDYLFMISNEGKLYLINAYEIKD 80 (312)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSS--CCCEECCCC--CTTCCEEE---EEEEETTCEEEEEETTSEEEEEEGGGSCC
T ss_pred CCEEEEEeCCCEEEEeEHHHhhccccC--CCCceeccc--CCCCEEEE---EEEECCCCEEEEEECCCeEEEEEHHHCCC
Confidence 345778899999998887665321000 000001111 11122221 22344556899999999999998 6999
Q ss_pred CccccCCCC--------CCCceeEEeecccc-CCceEEEEccCCceeee
Q 043502 259 PRWLNHGRP--------PGANVAAIADAGNV-RPEVVYTISSTGDLYEY 298 (949)
Q Consensus 259 ~rW~~hg~P--------Pga~VA~I~D~~~~-R~~vVftiss~GdLYeY 298 (949)
..|...|.| +|-+|.++.-...+ -..-++.++++|..+.-
T Consensus 81 ~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~ 129 (312)
T 1suu_A 81 SSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARF 129 (312)
T ss_dssp -------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEE
T ss_pred CCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEE
Confidence 999998886 67777777554333 12346677888876643
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.97 E-value=7.5 Score=35.82 Aligned_cols=139 Identities=12% Similarity=0.141 Sum_probs=70.4
Q ss_pred eecccCc-EEEEecCCeEeEEEEeceee--eeecCCCCCCcce-EEeecccccccCeEEEEccCceEeeecCce--ee-e
Q 043502 667 KVTAEDA-LFFVSKNGRLLQFTVALRKF--KWKDCRHPLDTKV-ACIVDQELFRENIVFVVGRNGRLYQYNKVT--EL-W 739 (949)
Q Consensus 667 ~vt~~dk-lF~vt~~GrLlq~tva~rkw--kW~dhg~PPgTkI-ata~d~~~~r~~~iFvvG~NGrLYEwNg~T--W~-W 739 (949)
.+..+++ +++++.+|.+.-+-....+. +...|..+ | ..+..+ +++.+++.+.||.++-|+-.+ .. -
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~----i~~~~~~~---~~~~l~~~~~dg~i~~~d~~~~~~~~~ 220 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG----ASCIDISN---DGTKLWTGGLDNTVRSWDLREGRQLQQ 220 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCc----eEEEEECC---CCCEEEEEecCCcEEEEECCCCceEee
Confidence 3344443 55666788877655433332 23333332 3 222222 456788888999988865322 11 2
Q ss_pred eecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecCCCCCCceeecCCCCcccCceEEEE
Q 043502 740 HEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCLHGNQLLLI 819 (949)
Q Consensus 740 hdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf~gsqLFvi 819 (949)
..|..+.. ..+..|. +..+++.+.||.++-+--..+.-.....|..|.. .+.-+| ++..|+..
T Consensus 221 ~~~~~~v~-------~~~~s~~----~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~--~~~~~~----~~~~l~~~ 283 (337)
T 1gxr_A 221 HDFTSQIF-------SLGYCPT----GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL--SLKFAY----CGKWFVST 283 (337)
T ss_dssp EECSSCEE-------EEEECTT----SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEE--EEEECT----TSSEEEEE
T ss_pred ecCCCceE-------EEEECCC----CCEEEEEcCCCcEEEEECCCCCeEEEcCCcccee--EEEECC----CCCEEEEe
Confidence 22322211 1233332 2345666678887664444444444555655542 222222 34566666
Q ss_pred ecCCceEEEEEe
Q 043502 820 GSDGKVYLRYMD 831 (949)
Q Consensus 820 GSDG~LYeRywd 831 (949)
+.||.+ +.|+
T Consensus 284 ~~dg~i--~~~~ 293 (337)
T 1gxr_A 284 GKDNLL--NAWR 293 (337)
T ss_dssp ETTSEE--EEEE
T ss_pred cCCCcE--EEEE
Confidence 667765 5666
No 35
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=91.96 E-value=2.9 Score=47.30 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=84.6
Q ss_pred EEEEec--CCeEeEEEEeceeeeeecC-CCCCC-cceEEeecccccccCeEEEEccCceEee--ecCceeeeeecCCC--
Q 043502 674 LFFVSK--NGRLLQFTVALRKFKWKDC-RHPLD-TKVACIVDQELFRENIVFVVGRNGRLYQ--YNKVTELWHEHYQS-- 745 (949)
Q Consensus 674 lF~vt~--~GrLlq~tva~rkwkW~dh-g~PPg-TkIata~d~~~~r~~~iFvvG~NGrLYE--wNg~TW~WhdHGkP-- 745 (949)
+|+++. ++.||.-+ -..-+|... +.|.. ..|+ +| ..+.+++|+. .+|.||. +.|.+|.=...+.|
T Consensus 559 ~~~~~~~~~~~v~~S~--D~G~tW~~~~~l~~~~~~i~--~d--~~~~~~~y~g-~~g~v~~S~DgG~tW~~~~~~lp~~ 631 (763)
T 3a0f_A 559 VWSPSKADGKGPYTSS--DYGKTWTAPSGLSKQTTGIA--AD--RVQANTFYVY-VEGDFFVSTDGGKSYTKKGNGLPCC 631 (763)
T ss_dssp EEECSSCCSSCCEEES--STTSCCBCCBSCCCCCSCEE--EC--SSSTTCEEEE-ETTEEEEESSTTSBCEEECBTSCCS
T ss_pred EEEecccCCCceEEeC--CCCCCCeecCCCCCCcceEE--Ee--ccCCCEEEEE-cCCCEEEEeCCCcCccccccCCCcc
Confidence 555542 45554322 223455554 45542 2232 22 3456667766 7999999 66666653334555
Q ss_pred -CceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecCCCCCCc---eeecCCCCcccCceEEEEe-
Q 043502 746 -QHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPGKGV---TLVGSPGPCLHGNQLLLIG- 820 (949)
Q Consensus 746 -~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~~gv---tvv~spG~sf~gsqLFviG- 820 (949)
....+ -++.| .-.+.+++.+.+++||. .=+.|..|+=+. +.|.... ...+..-..-..+.||+.|
T Consensus 632 ~~~~~~-----i~~~~---~~~~~l~~~~~~~~l~~-S~D~G~tW~~~~-~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~ 701 (763)
T 3a0f_A 632 WTYTGT-----PVTSN---LRAGELWVSVKGVGIYH-STDFGNTFTALA-GSGSSLNPAVFSIGAPQTPNATETLFLWGI 701 (763)
T ss_dssp SCCCEE-----EEECS---SSTTCEEEEETTTEEEE-ESSTTSBCEECT-TBTTTBEEEEEEEECCSSTTSSCEEEEEEE
T ss_pred cCcccc-----EEECC---CCCCcEEEEcCCCeEEE-EcCCCCCceEcc-CCCcccccceeEEeeecCCCCCceEEEEEE
Confidence 22221 11222 23567999888777775 223334555443 4453211 0112111111246899999
Q ss_pred ----cCCceEEEEEeCCcceeee---cCCCCC
Q 043502 821 ----SDGKVYLRYMDQMTWRWKN---CGFPHK 845 (949)
Q Consensus 821 ----SDG~LYeRywdg~tWtW~N---hG~P~~ 845 (949)
.+|.||+--=.+.+|+=++ |+.|.+
T Consensus 702 ~~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~ 733 (763)
T 3a0f_A 702 PSASQPEGLYMSTDNGGLWTRLNDDAHNYGGA 733 (763)
T ss_dssp CSTTSCSEEEEESSTTSCCEECSCTTCCTBCE
T ss_pred cccCCCcEEEEeCCCCCCcEeccCccccCCCc
Confidence 8999998776677999888 888843
No 36
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=91.86 E-value=4.3 Score=41.56 Aligned_cols=248 Identities=13% Similarity=0.143 Sum_probs=132.5
Q ss_pred eeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccCCCc
Q 043502 183 RILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVEPPR 260 (949)
Q Consensus 183 tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~p~r 260 (949)
.++.||..|.+-.+.+.+-...- .....-+..+.++.-..+. =++......|+|.|.+|+.+.|. +|+..+
T Consensus 5 ~~v~~T~~G~iKr~~~~~~~~~~----~~~~g~~~~~~ke~D~l~~---~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~ 77 (307)
T 1zi0_A 5 VVVTLSHQGYVKYQPLSEYEAQR----RGGKGKSAARIKEEDFIDR---LLVANTHDHILCFSSRGRVYSMKVYQLPEAT 77 (307)
T ss_dssp EEEEEETTSEEEEEECC------------------------CCEEE---EEEEETTCEEEEEETTSEEEEEEGGGSCCCC
T ss_pred EEEEEeCCCEEEEeeHHHhhhhc----cCCCCceeeeeCCCCEEEE---EEEECCCCEEEEEECCCEEEEEEhhHCcCCC
Confidence 46678999999888777522110 0000000011111122221 23455667899999999999998 799999
Q ss_pred cccCCCC--------CCCceeEEeeccccCCc-eEEEEccCCce-----eeeccCCchhhhhhccccccccccccccCcc
Q 043502 261 WLNHGRP--------PGANVAAIADAGNVRPE-VVYTISSTGDL-----YEYDRISKPSWRKHIWSKGTAANASLIPSMA 326 (949)
Q Consensus 261 W~~hg~P--------Pga~VA~I~D~~~~R~~-vVftiss~GdL-----YeYnr~tkpsW~kHiws~~l~~~~sl~~s~g 326 (949)
|+..|.| +|-+|.++.-...+-++ .++.++++|-. -+|....+ +-+..-.+...-.+....-
T Consensus 78 ~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r----~G~~~i~l~~~d~lv~~~~ 153 (307)
T 1zi0_A 78 RGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT----AGKVAIKLVDGDELIGVDL 153 (307)
T ss_dssp SSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT----TCEESSCCCTTCCEEEEEE
T ss_pred CCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc----CCeEEEEECCCCEEEEEEE
Confidence 9988873 78888887655444433 68889999975 34443322 1111111111111211111
Q ss_pred cccccccCCceeeEEEEecCCcEEEEEeec-cceeEEEcC-----CCCCCcccccceeccCCccccceEEEEEcccceEE
Q 043502 327 CTLHGLIGDHSTSLFLLTKGGNLVERRIQQ-RKWKWIIHG-----SPEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVF 400 (949)
Q Consensus 327 ~t~~gl~g~~S~SLFlltk~G~LVErr~~q-rkWkWi~HG-----tP~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vy 400 (949)
+ +..--|+|+|+.|.++-...++ +--..---| -..++.+.++..+.. ...|+++|..|++-
T Consensus 154 ~-------~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~------~~~ll~~T~~G~~K 220 (307)
T 1zi0_A 154 T-------SGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG------DGAILTATQNGYGK 220 (307)
T ss_dssp E-------CTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCS------SCEEEEEETTSEEE
T ss_pred e-------CCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecC------CCEEEEEEcCCceE
Confidence 1 1122699999999998776652 222111112 123455666654421 13599999999999
Q ss_pred EEeeccCCCCCcccccccccc--ccCCC--cccccccCCCCcccccceEEEEeCCCceeecccCCC
Q 043502 401 EYQIPKYSGTSQENQFSGGWI--SHLHP--PHARAARGAVGLPFQVGRTIFPLDDGRLAELHPSGL 462 (949)
Q Consensus 401 ey~~~k~tg~~q~nq~~~~W~--sh~~P--~~ak~a~~~~g~pfq~grviF~L~DGRLaELhl~g~ 462 (949)
+..+.+|.- +-++.+. ..-.. .+.-+++-. +. ..+.+++.-.+|++..+....+
T Consensus 221 r~~~~e~~~-----~~Rg~kG~~~~~~~~~~~~lv~~~~--v~-~~~~l~~~t~~g~~ir~~~~~i 278 (307)
T 1zi0_A 221 RTAVAEYPT-----KSRATKGVISIKVTERNGLVVGAVQ--VD-DCDQIMMITDAGTLVRTRVSEI 278 (307)
T ss_dssp EECGGGSCC-----CCTTSCCEESSCCCTTTCSEEEEEE--EC-TTCEEEEEESSCCEEEEEGGGS
T ss_pred EEEHHHhcc-----CCCCCCCEEeeEecCCCCeEEEEEE--eC-CCceEEEEcCCCcEEEEecccc
Confidence 988877751 1122121 01010 111121111 11 2467889999999877665543
No 37
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.43 E-value=10 Score=42.35 Aligned_cols=125 Identities=14% Similarity=0.214 Sum_probs=76.3
Q ss_pred ccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecCCCC-CCC-CCcceeecccCcEEEEecCCeEeEEE
Q 043502 610 GVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGGPPW-DGI-TGKAMKVTAEDALFFVSKNGRLLQFT 687 (949)
Q Consensus 610 g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pw-dgi-pG~~~~vt~~dklF~vt~~GrLlq~t 687 (949)
+++-..+|.||+.+.+|.|+-=.-..-...|.--...+.. +... +. +.+ .|.+. .++++|+.+.+|+|+-+-
T Consensus 64 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~--~~~~-~~~~~~~~~~~~---~~g~v~v~~~dg~l~AlD 137 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRH--RAGE-ACCDAVNRGVAV---WKGKVYVGVLDGRLEAID 137 (689)
T ss_dssp CCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGG--GGGG-CTTCSCCCCCEE---ETTEEEEECTTSEEEEEE
T ss_pred ecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCcc--cccc-ccccCCCCccEE---ECCEEEEEccCCEEEEEE
Confidence 3444578888888888888766655556778754332211 1000 00 000 22333 688999999999999888
Q ss_pred EeceeeeeecCCC--CC-CcceEEeecccccccCeEEEEc------cCceEeeec--CceeeeeecC
Q 043502 688 VALRKFKWKDCRH--PL-DTKVACIVDQELFRENIVFVVG------RNGRLYQYN--KVTELWHEHY 743 (949)
Q Consensus 688 va~rkwkW~dhg~--PP-gTkIata~d~~~~r~~~iFvvG------~NGrLYEwN--g~TW~WhdHG 743 (949)
..+.+..|+.-.. +. +..+..+ +.+. +++||+.. .+|+||-++ .+..+|.-+-
T Consensus 138 a~TG~~~W~~~~~~~~~~~~~~~~s--P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 138 AKTGQRAWSVDTRADHKRSYTITGA--PRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp TTTCCEEEEEECCSCTTSCCBCCSC--CEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCCCEeeeecCcCCCCCCccccCC--cEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 8888888986543 21 1222222 3444 55777764 378999966 3567787653
No 38
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.41 E-value=9.1 Score=37.06 Aligned_cols=178 Identities=15% Similarity=0.228 Sum_probs=91.7
Q ss_pred cccceEEEecc-CcE--EEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEecC----------C
Q 043502 615 YNGSLYMVDLY-GSL--LIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKN----------G 681 (949)
Q Consensus 615 ~ngsLf~vd~~-GsL--~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~----------G 681 (949)
+++.||+..-. +.. -+.-.+-..-.|...+.|+..+. +.++ +..++++|+..-. .
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-----------~~~~-~~~~~~lyv~GG~~~~~~~~~~~~ 90 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRS-----------GLAG-CVVGGLLYAVGGRNNSPDGNTDSS 90 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCB-----------SCEE-EEETTEEEEECCEEEETTEEEECC
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccc-----------cceE-EEECCEEEEECCCcCCCCCCeecc
Confidence 88889988652 110 12223344556877777665442 1222 3468889987532 1
Q ss_pred eEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEcc-Cc-----eEeeecCceeeeeecCCCCceeeecCCC
Q 043502 682 RLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR-NG-----RLYQYNKVTELWHEHYQSQHLVLSILPG 755 (949)
Q Consensus 682 rLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~-NG-----rLYEwNg~TW~WhdHGkP~~t~ls~~pG 755 (949)
.++. ......+|......|-..-..+ ..++ +++||+.|. ++ .++.|+-.+..|..-...+.... +
T Consensus 91 ~~~~--~d~~~~~W~~~~~~p~~r~~~~--~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~ 161 (308)
T 1zgk_A 91 ALDC--YNPMTNQWSPCAPMSVPRNRIG--VGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI----G 161 (308)
T ss_dssp CEEE--EETTTTEEEECCCCSSCCBTCE--EEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB----S
T ss_pred eEEE--ECCCCCeEeECCCCCcCccccE--EEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc----c
Confidence 2332 2445567777655444333222 2234 557777764 32 36779988889988764443221 1
Q ss_pred ceecCCCCCCcceEEEEecCC-----CeEEEEEeCCCCeEEeecCCCCCCceeecCCCCcccCceEEEEecC
Q 043502 756 TAMRPPSASLTGSLFMLSEDG-----GLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCLHGNQLLLIGSD 822 (949)
Q Consensus 756 tAM~psk~sl~gslFm~~snG-----~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf~gsqLFviGSD 822 (949)
.++.- +.+++|+.+... .-.|.|=-....|. .-...+.+. . ....+..+++||++|+-
T Consensus 162 ~~~~~----~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~--~~~~~p~~r--~-~~~~~~~~~~iyv~GG~ 224 (308)
T 1zgk_A 162 VGVAV----LNRLLYAVGGFDGTNRLNSAECYYPERNEWR--MITAMNTIR--S-GAGVCVLHNCIYAAGGY 224 (308)
T ss_dssp CEEEE----ETTEEEEECCBCSSCBCCCEEEEETTTTEEE--ECCCCSSCC--B-SCEEEEETTEEEEECCB
T ss_pred eEEEE----ECCEEEEEeCCCCCCcCceEEEEeCCCCeEe--eCCCCCCcc--c-cceEEEECCEEEEEeCC
Confidence 22221 245688876421 12333322233444 443322111 1 12234558899999963
No 39
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.03 E-value=5.3 Score=44.34 Aligned_cols=115 Identities=12% Similarity=0.171 Sum_probs=73.2
Q ss_pred cCceEEEEeeCCeeEEEEecCCEEEEEecCCCC----------CccccccccccceEEEeccCcEEEEEecCCCceeeec
Q 043502 574 GSRSFFLITDGGFTFEYLYAESVWLWLRHDHST----------PMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINC 643 (949)
Q Consensus 574 ~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T----------~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~ 643 (949)
.+..+|+.|.+|.+|=.=-..+.=+|-..-... .....+..+++.||+...+|.|.--.-..-...|.--
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 357899999999887644345555665432211 1123345588999999999999888876667788765
Q ss_pred cCCCCCceeecCCCCCCCCCcceeecccCcEEEEec------CCeEeEEEEeceeeeeecC
Q 043502 644 TAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSK------NGRLLQFTVALRKFKWKDC 698 (949)
Q Consensus 644 t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~------~GrLlq~tva~rkwkW~dh 698 (949)
..-++...-+.+ .. +..++.+|+.+. +|+|+-+-..+.+..|...
T Consensus 145 ~~~~~~~~~~~~--------~P--~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 145 TTDPAKPYSITG--------AP--RVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp CSCTTSSCBCCS--------CC--EEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred cCCCCCcceecC--------CC--EEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 432221111111 11 225778888765 5888888888888888765
No 40
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.92 E-value=0.52 Score=48.68 Aligned_cols=104 Identities=18% Similarity=0.292 Sum_probs=64.8
Q ss_pred cceEEEEecCceEEEEeeCCeeEEEEe-cCCEEEEEecCCCCCcccccc-----c----cccceEEEeccCcEEEEEe--
Q 043502 566 YFRLRVMHGSRSFFLITDGGFTFEYLY-AESVWLWLRHDHSTPMRGVLG-----N----YNGSLYMVDLYGSLLIRER-- 633 (949)
Q Consensus 566 nf~~rvmh~~~s~fliTd~G~~fE~~~-~~~~WlWl~H~h~T~m~g~~g-----~----~ngsLf~vd~~GsL~~R~~-- 633 (949)
||..=.+|.+..+|.| .+|.+|+.== ++.-..|..= . ...|..| + -||-||.+ .||.|+-+..
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s--~-t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGR--A-KKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHH--C-EEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCccccccc--c-cEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 6666678989999999 9999888432 2222333321 1 1222111 1 48889998 7788876655
Q ss_pred cCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEecCCeEe
Q 043502 634 SSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKNGRLL 684 (949)
Q Consensus 634 ~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~GrLl 684 (949)
++++ .|+.- ++ +|+.-=|+.+ .+.-++.++.||-|+ +|+|+
T Consensus 117 ~~~~-~Wl~~-----a~-~vg~~gw~~~--~~lff~p~G~Lyav~-dg~ly 157 (236)
T 1tl2_A 117 SDTD-NWIAR-----AT-EVGSGGWSGF--KFLFFHPNGYLYAVH-GQQFY 157 (236)
T ss_dssp STTC-CHHHH-----SE-EEECSSGGGE--EEEEECTTSCEEEEE-TTEEE
T ss_pred CCCC-ceecc-----cc-EeccCCCCce--EEEEECCCceEEEEe-CCcEE
Confidence 4444 66654 22 3333357777 555678888899888 88866
No 41
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=90.69 E-value=6.9 Score=42.70 Aligned_cols=103 Identities=15% Similarity=0.109 Sum_probs=54.5
Q ss_pred ccceEEEEecCceEEEEee----------CC--eeEEEEecCCEEEEEecCCCCCccc-ccc---ccccceEEEeccCcE
Q 043502 565 NYFRLRVMHGSRSFFLITD----------GG--FTFEYLYAESVWLWLRHDHSTPMRG-VLG---NYNGSLYMVDLYGSL 628 (949)
Q Consensus 565 ~nf~~rvmh~~~s~fliTd----------~G--~~fE~~~~~~~WlWl~H~h~T~m~g-~~g---~~ngsLf~vd~~GsL 628 (949)
..++.-|+..++++|++-- ++ ..+.|=-..+.|.=+.- .|++... +.+ ..+|+||++.-...-
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~-~~~~~~~~~~~~~~~~~g~lyv~GG~~~~ 265 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV-TVTKHDMFCPGISMDGNGQIVVTGGNDAK 265 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE-EECSCCCSSCEEEECTTSCEEEECSSSTT
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc-cCCCCCCccccccCCCCCCEEEeCCCCCC
Confidence 4567777765678888731 12 12222233455532211 1122111 212 278999999763322
Q ss_pred EEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEec
Q 043502 629 LIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSK 679 (949)
Q Consensus 629 ~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~ 679 (949)
-++-++-..-.|.....|+..|.- ++++ +..++++|++.-
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~---------~s~~--~~~dg~iyv~GG 305 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGY---------QSSA--TMSDGRVFTIGG 305 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSS---------CEEE--ECTTSCEEEECC
T ss_pred ceEEecCcCCceeECCCCCccccc---------cceE--EecCCeEEEEeC
Confidence 344555556678888777665421 2222 223899999864
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=90.58 E-value=10 Score=34.89 Aligned_cols=135 Identities=10% Similarity=-0.029 Sum_probs=63.2
Q ss_pred eecccC-cEEEEecCCeEeEEEEeceeeeee-cCCCCCCcceEEeecccccccCeEEEEccCceEeeecCce---eeeee
Q 043502 667 KVTAED-ALFFVSKNGRLLQFTVALRKFKWK-DCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQYNKVT---ELWHE 741 (949)
Q Consensus 667 ~vt~~d-klF~vt~~GrLlq~tva~rkwkW~-dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEwNg~T---W~Whd 741 (949)
.+..++ .+++++.+|.+.-+-....+.... .+..+ -+.++. .+ .++.+++.+.+|+++-|+-.+ .....
T Consensus 190 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-v~~~~~--s~---~~~~l~~~~~~~~i~~~~~~~~~~~~~~~ 263 (337)
T 1gxr_A 190 DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ-IFSLGY--CP---TGEWLAVGMESSNVEVLHVNKPDKYQLHL 263 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC-EEEEEE--CT---TSSEEEEEETTSCEEEEETTSSCEEEECC
T ss_pred EECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCc-eEEEEE--CC---CCCEEEEEcCCCcEEEEECCCCCeEEEcC
Confidence 334444 455566788876655433222221 22222 111222 12 355677778899988765332 22233
Q ss_pred cCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCe--EEeecCCCCCCceeecCCCCcccCceEEEE
Q 043502 742 HYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGW--NWVEHGTPGKGVTLVGSPGPCLHGNQLLLI 819 (949)
Q Consensus 742 HGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW--~WVdHGtP~~gvtvv~spG~sf~gsqLFvi 819 (949)
|..+... .+..|. +..++..+.||.+ +.|+..++= .=..|..+. ..+.=+| ++..|+..
T Consensus 264 ~~~~v~~-------~~~~~~----~~~l~~~~~dg~i--~~~~~~~~~~~~~~~~~~~v--~~~~~s~----~~~~l~~~ 324 (337)
T 1gxr_A 264 HESCVLS-------LKFAYC----GKWFVSTGKDNLL--NAWRTPYGASIFQSKESSSV--LSCDISV----DDKYIVTG 324 (337)
T ss_dssp CSSCEEE-------EEECTT----SSEEEEEETTSEE--EEEETTTCCEEEEEECSSCE--EEEEECT----TSCEEEEE
T ss_pred CccceeE-------EEECCC----CCEEEEecCCCcE--EEEECCCCeEEEEecCCCcE--EEEEECC----CCCEEEEe
Confidence 3322111 233331 1235555666665 345543321 123455443 2222222 35677777
Q ss_pred ecCCceE
Q 043502 820 GSDGKVY 826 (949)
Q Consensus 820 GSDG~LY 826 (949)
+.||.++
T Consensus 325 ~~dg~i~ 331 (337)
T 1gxr_A 325 SGDKKAT 331 (337)
T ss_dssp ETTSCEE
T ss_pred cCCCeEE
Confidence 8888774
No 43
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=90.35 E-value=16 Score=36.58 Aligned_cols=210 Identities=10% Similarity=0.061 Sum_probs=106.2
Q ss_pred ecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCcee
Q 043502 573 HGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQV 652 (949)
Q Consensus 573 h~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V 652 (949)
..++.++..+.||.+.=+=...+.-...-.+|..++. ++.-.+..|+....||++.+=..........
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~----------- 208 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL-CLQYDERVIITGSSDSTVRVWDVNTGEMLNT----------- 208 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEE-EEECCSSEEEEEETTSCEEEEESSSCCEEEE-----------
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEE-EEEECCCEEEEEcCCCeEEEEECCCCcEEEE-----------
Confidence 3566777778888765443334444455555654442 2222344566667788877644332222111
Q ss_pred ecCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEecee-----eeeecCCCCCCcceEEeecccccccCeEEEEccCc
Q 043502 653 IGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRK-----FKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNG 727 (949)
Q Consensus 653 ~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rk-----wkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NG 727 (949)
+.+ .-+.|-.++. .++.++.++.||.+.-+-..... ..-..|..+ |..+ -+.++.+++.+.||
T Consensus 209 ~~~-h~~~v~~l~~---~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~----v~~~----~~~~~~l~s~~~dg 276 (435)
T 1p22_A 209 LIH-HCEAVLHLRF---NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA----VNVV----DFDDKYIVSASGDR 276 (435)
T ss_dssp ECC-CCSCEEEEEC---CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSC----EEEE----EEETTEEEEEETTS
T ss_pred EcC-CCCcEEEEEE---cCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCc----EEEE----EeCCCEEEEEeCCC
Confidence 111 0011111111 34567777888888765543322 122233222 2221 22678899999999
Q ss_pred eEeeecCcee----eeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC---eEEeecCCCCCC
Q 043502 728 RLYQYNKVTE----LWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG---WNWVEHGTPGKG 800 (949)
Q Consensus 728 rLYEwNg~TW----~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g---W~WVdHGtP~~g 800 (949)
.++-|+-.+. ....|..+-. ++.. -+..++..+.||.+ +.|+..++ .....|..|...
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~---------~~~~----~~~~l~~g~~dg~i--~iwd~~~~~~~~~~~~h~~~v~~ 341 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIA---------CLQY----RDRLVVSGSSDNTI--RLWDIECGACLRVLEGHEELVRC 341 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEE---------EEEE----ETTEEEEEETTSCE--EEEETTTCCEEEEECCCSSCEEE
T ss_pred eEEEEECCcCcEEEEEcCCCCcEE---------EEEe----CCCEEEEEeCCCeE--EEEECCCCCEEEEEeCCcCcEEE
Confidence 9888764331 1223332211 1111 12346666777877 45775432 234445544321
Q ss_pred ceeecCCCCcccCceEEEEecCCceEEEEEe
Q 043502 801 VTLVGSPGPCLHGNQLLLIGSDGKVYLRYMD 831 (949)
Q Consensus 801 vtvv~spG~sf~gsqLFviGSDG~LYeRywd 831 (949)
+ +|++..|+..+.||.+ +.|+
T Consensus 342 ~--------~~~~~~l~sg~~dg~i--~vwd 362 (435)
T 1p22_A 342 I--------RFDNKRIVSGAYDGKI--KVWD 362 (435)
T ss_dssp E--------ECCSSEEEEEETTSCE--EEEE
T ss_pred E--------EecCCEEEEEeCCCcE--EEEE
Confidence 1 2355677777778876 4666
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=90.29 E-value=13 Score=35.43 Aligned_cols=139 Identities=15% Similarity=0.175 Sum_probs=73.2
Q ss_pred ceeecccCcEEEEecCCeEeEEEEeceee--eeecCCCCCCcceEEeecccccccCeEEEEccCceEeeecCcee----e
Q 043502 665 AMKVTAEDALFFVSKNGRLLQFTVALRKF--KWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQYNKVTE----L 738 (949)
Q Consensus 665 ~~~vt~~dklF~vt~~GrLlq~tva~rkw--kW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEwNg~TW----~ 738 (949)
.+....++.+++++.+|.+.-+-....+. +...|..| =+.++.. + .++.+++.+.||.++-|+-.+. .
T Consensus 211 ~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~-i~~~~~~--~---~~~~l~~~~~d~~i~i~d~~~~~~~~~ 284 (425)
T 1r5m_A 211 DVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGP-ISVLEFN--D---TNKLLLSASDDGTLRIWHGGNGNSQNC 284 (425)
T ss_dssp CCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSC-EEEEEEE--T---TTTEEEEEETTSCEEEECSSSBSCSEE
T ss_pred EEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCc-eEEEEEC--C---CCCEEEEEcCCCEEEEEECCCCccceE
Confidence 34455678888999999988766543332 23333332 1112222 2 3457788888999888764332 2
Q ss_pred eeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC---eEEeecCCCCCCceeecCCCCcccCce
Q 043502 739 WHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG---WNWVEHGTPGKGVTLVGSPGPCLHGNQ 815 (949)
Q Consensus 739 WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g---W~WVdHGtP~~gvtvv~spG~sf~gsq 815 (949)
...|..+-.. .+..| .+.++..+.||.+ +.|+...+ .....|..|.. .+.-+| ++..
T Consensus 285 ~~~~~~~i~~-------~~~~~-----~~~l~~~~~d~~i--~i~d~~~~~~~~~~~~~~~~i~--~~~~s~----~~~~ 344 (425)
T 1r5m_A 285 FYGHSQSIVS-------ASWVG-----DDKVISCSMDGSV--RLWSLKQNTLLALSIVDGVPIF--AGRISQ----DGQK 344 (425)
T ss_dssp ECCCSSCEEE-------EEEET-----TTEEEEEETTSEE--EEEETTTTEEEEEEECTTCCEE--EEEECT----TSSE
T ss_pred ecCCCccEEE-------EEECC-----CCEEEEEeCCCcE--EEEECCCCcEeEecccCCccEE--EEEEcC----CCCE
Confidence 2223322111 22333 1256777777766 45664332 22444555542 222222 3556
Q ss_pred EEEEecCCceEEEEEe
Q 043502 816 LLLIGSDGKVYLRYMD 831 (949)
Q Consensus 816 LFviGSDG~LYeRywd 831 (949)
|++.+.||.++ .|+
T Consensus 345 l~~~~~dg~i~--i~~ 358 (425)
T 1r5m_A 345 YAVAFMDGQVN--VYD 358 (425)
T ss_dssp EEEEETTSCEE--EEE
T ss_pred EEEEECCCeEE--EEE
Confidence 66677788765 565
No 45
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.24 E-value=13 Score=35.44 Aligned_cols=196 Identities=14% Similarity=0.233 Sum_probs=98.1
Q ss_pred cCCEEEEEecCCCCCcccccc-ccccceEEEeccC------cEEEEEecCCCce---eeeccCCCCCceeecCCCCCCCC
Q 043502 593 AESVWLWLRHDHSTPMRGVLG-NYNGSLYMVDLYG------SLLIRERSSNELA---WINCTAMRKGRQVIGGPPWDGIT 662 (949)
Q Consensus 593 ~~~~WlWl~H~h~T~m~g~~g-~~ngsLf~vd~~G------sL~~R~~~g~~~~---W~n~t~mr~G~~V~~G~pwdgip 662 (949)
..+.|.=+. ..|.+..+... .++++||+..-.. .+++ .+-..-. |...+.|+..+.
T Consensus 39 ~~~~W~~~~-~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~--~d~~~~~~~~W~~~~~~p~~r~----------- 104 (301)
T 2vpj_A 39 KTQEWSFLP-SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVEC--LDYTADEDGVWYSVAPMNVRRG----------- 104 (301)
T ss_dssp TTTEEEECC-CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEE--EETTCCTTCCCEEECCCSSCCB-----------
T ss_pred CCCeEEeCC-CCChhhccccEEEECCEEEEEcCCCCCccCceEEE--EECCCCCCCeeEECCCCCCCcc-----------
Confidence 456666554 34454444333 3888999876432 2222 1222223 777777665432
Q ss_pred CcceeecccCcEEEEec------CCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEc-cCc-----eEe
Q 043502 663 GKAMKVTAEDALFFVSK------NGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVG-RNG-----RLY 730 (949)
Q Consensus 663 G~~~~vt~~dklF~vt~------~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG-~NG-----rLY 730 (949)
+.++ +..++++|+..- ...++.+- ...-+|......|-.....+ ..++ +++||+.| .++ .++
T Consensus 105 ~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~d--~~~~~W~~~~~~p~~r~~~~--~~~~-~~~iyv~GG~~~~~~~~~~~ 178 (301)
T 2vpj_A 105 LAGA-TTLGDMIYVSGGFDGSRRHTSMERYD--PNIDQWSMLGDMQTAREGAG--LVVA-SGVIYCLGGYDGLNILNSVE 178 (301)
T ss_dssp SCEE-EEETTEEEEECCBCSSCBCCEEEEEE--TTTTEEEEEEECSSCCBSCE--EEEE-TTEEEEECCBCSSCBCCCEE
T ss_pred ceeE-EEECCEEEEEcccCCCcccceEEEEc--CCCCeEEECCCCCCCcccce--EEEE-CCEEEEECCCCCCcccceEE
Confidence 1222 335888888852 12344333 33445555444443332211 2234 45666665 443 377
Q ss_pred eecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecC------CCeEEEEEeCCCCeEEeecCCCCCCceee
Q 043502 731 QYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSED------GGLVEYHWNTWDGWNWVEHGTPGKGVTLV 804 (949)
Q Consensus 731 EwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~sn------G~LyEr~Wntg~gW~WVdHGtP~~gvtvv 804 (949)
.|+-.+..|..-...+.... +.++.. +.+++|+.+.. ..++.+- -....|.-+ ..++.+- .
T Consensus 179 ~~d~~~~~W~~~~~~p~~r~----~~~~~~----~~~~i~v~GG~~~~~~~~~v~~yd-~~~~~W~~~--~~~p~~r--~ 245 (301)
T 2vpj_A 179 KYDPHTGHWTNVTPMATKRS----GAGVAL----LNDHIYVVGGFDGTAHLSSVEAYN-IRTDSWTTV--TSMTTPR--C 245 (301)
T ss_dssp EEETTTTEEEEECCCSSCCB----SCEEEE----ETTEEEEECCBCSSSBCCCEEEEE-TTTTEEEEE--CCCSSCC--B
T ss_pred EEeCCCCcEEeCCCCCcccc----cceEEE----ECCEEEEEeCCCCCcccceEEEEe-CCCCcEEEC--CCCCCcc--c
Confidence 79988889988764443221 222221 24578888743 2344432 223345544 4322121 1
Q ss_pred cCCCCcccCceEEEEecC
Q 043502 805 GSPGPCLHGNQLLLIGSD 822 (949)
Q Consensus 805 ~spG~sf~gsqLFviGSD 822 (949)
....+..+++||++|+.
T Consensus 246 -~~~~~~~~~~i~v~GG~ 262 (301)
T 2vpj_A 246 -YVGATVLRGRLYAIAGY 262 (301)
T ss_dssp -SCEEEEETTEEEEECCB
T ss_pred -ceeEEEECCEEEEEcCc
Confidence 22234558899999863
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.24 E-value=6.8 Score=36.49 Aligned_cols=73 Identities=10% Similarity=0.028 Sum_probs=42.8
Q ss_pred eecceeecCCcEEEEEecCCceeEeeccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 229 IKSGVVSQDGERVYFCTKNGLLLELSEVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~knG~LLe~tel~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
|..=.++.||..|+.++.+|.+.-+.--...+-...-......|..|+=.. ..+.+++.+.+|.++-||-.+.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP--DLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTC
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC--CCCEEEEecCCceEEEEECCCC
Confidence 344457889999999999998765552110111111111223344433111 2467888899999999997764
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.47 E-value=25 Score=37.58 Aligned_cols=221 Identities=11% Similarity=0.024 Sum_probs=111.0
Q ss_pred EEEEecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCcccccccccc-ceEEEeccCcEEEEEecCCCceeeeccCCC
Q 043502 569 LRVMHGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNG-SLYMVDLYGSLLIRERSSNELAWINCTAMR 647 (949)
Q Consensus 569 ~rvmh~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ng-sLf~vd~~GsL~~R~~~g~~~~W~n~t~mr 647 (949)
+..-..++.|...++||.+.-+-+..+..+..-.+|+.++....=+-+| .|+..+.+|++.+=......
T Consensus 61 ~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---------- 130 (814)
T 3mkq_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---------- 130 (814)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS----------
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc----------
Confidence 3334455667778888988766666677666666676555443333344 46777788887765443220
Q ss_pred CCceeecCCCCCCCCCcce--eecc-c-CcEEEEecCCeEeEEEEece--eeeeecCCCCCCcceEEeecccccccCeEE
Q 043502 648 KGRQVIGGPPWDGITGKAM--KVTA-E-DALFFVSKNGRLLQFTVALR--KFKWKDCRHPLDTKVACIVDQELFRENIVF 721 (949)
Q Consensus 648 ~G~~V~~G~pwdgipG~~~--~vt~-~-dklF~vt~~GrLlq~tva~r--kwkW~dhg~PPgTkIata~d~~~~r~~~iF 721 (949)
.-.+++.+ -++..+ .... + ..+++++.||.+.-+-.... ..+...+...+-+.++..+. -.++.++
T Consensus 131 ~~~~~~~~-----~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~ 202 (814)
T 3mkq_A 131 ALEQTFEG-----HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL---PDKPYMI 202 (814)
T ss_dssp EEEEEEEC-----CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCS---TTCCEEE
T ss_pred eEEEEEcC-----CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEEC---CCCCEEE
Confidence 00112222 122222 2233 3 35666778888765544222 23333333233333344321 1355788
Q ss_pred EEccCceEeeecCce--e--eeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC---eEEeec
Q 043502 722 VVGRNGRLYQYNKVT--E--LWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG---WNWVEH 794 (949)
Q Consensus 722 vvG~NGrLYEwNg~T--W--~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g---W~WVdH 794 (949)
+.+.||+++-|+-.+ . ....|..+-.. .+..|. +..++..+.||.++ .|+..++ .....|
T Consensus 203 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~-------~~~~~~----~~~l~~~~~dg~v~--vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSF-------AVFHPT----LPIIISGSEDGTLK--IWNSSTYKVEKTLNVG 269 (814)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCSSCEEE-------EEECSS----SSEEEEEETTSCEE--EEETTTCSEEEEECCS
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCCEEE-------EEEcCC----CCEEEEEeCCCeEE--EEECCCCcEEEEeecC
Confidence 888999988875322 1 23334333211 223331 12455666678774 4664431 223333
Q ss_pred CCCCCCceeecCCCCcccCce-EEEEecCCceE
Q 043502 795 GTPGKGVTLVGSPGPCLHGNQ-LLLIGSDGKVY 826 (949)
Q Consensus 795 GtP~~gvtvv~spG~sf~gsq-LFviGSDG~LY 826 (949)
..+. ..+.-+| .+.+ +++.|+|+.++
T Consensus 270 ~~~v--~~~~~~~----~~~~~~~~~~~~~~~~ 296 (814)
T 3mkq_A 270 LERS--WCIATHP----TGRKNYIASGFDNGFT 296 (814)
T ss_dssp SSSE--EEEEECT----TCGGGEEEEEETTEEE
T ss_pred CCcE--EEEEEcc----CCCceEEEEEeCCCEE
Confidence 3332 1221122 2333 47777777754
No 48
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.78 E-value=12 Score=36.30 Aligned_cols=155 Identities=15% Similarity=0.264 Sum_probs=82.1
Q ss_pred cCCEEEEEecCCCCCcccc-ccccccceEEEeccC----c----EEEEEecCCCceeeeccCCCCCceeecCCCCCCCCC
Q 043502 593 AESVWLWLRHDHSTPMRGV-LGNYNGSLYMVDLYG----S----LLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITG 663 (949)
Q Consensus 593 ~~~~WlWl~H~h~T~m~g~-~g~~ngsLf~vd~~G----s----L~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG 663 (949)
..+.|.=+. ..|.|..+. ...++++||+..-.. . -..+ .+-..-.|.....|+..+. +
T Consensus 75 ~~~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~-~d~~~~~W~~~~~~p~~r~-----------~ 141 (315)
T 4asc_A 75 LDSEWLGMP-PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMC-YDRLSFKWGESDPLPYVVY-----------G 141 (315)
T ss_dssp TTTEEEECC-CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEE-EETTTTEEEECCCCSSCCB-----------S
T ss_pred CCCeEEECC-CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEE-ECCCCCcEeECCCCCCccc-----------c
Confidence 456675442 233444443 334899999986521 1 1222 2334456888877766542 2
Q ss_pred cceeecccCcEEEEecC---C----eEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEE-ccCc-----eEe
Q 043502 664 KAMKVTAEDALFFVSKN---G----RLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVV-GRNG-----RLY 730 (949)
Q Consensus 664 ~~~~vt~~dklF~vt~~---G----rLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvv-G~NG-----rLY 730 (949)
.++ +..++++|+..-. + .++.+ ....-+|......|-..-..+ ...+++ +||+. |.++ .++
T Consensus 142 ~~~-~~~~~~iyv~GG~~~~~~~~~~~~~y--d~~~~~W~~~~~~p~~r~~~~--~~~~~~-~iyv~GG~~~~~~~~~~~ 215 (315)
T 4asc_A 142 HTV-LSHMDLVYVIGGKGSDRKCLNKMCVY--DPKKFEWKELAPMQTARSLFG--ATVHDG-RIIVAAGVTDTGLTSSAE 215 (315)
T ss_dssp CEE-EEETTEEEEECCBCTTSCBCCCEEEE--ETTTTEEEECCCCSSCCBSCE--EEEETT-EEEEEEEECSSSEEEEEE
T ss_pred eeE-EEECCEEEEEeCCCCCCcccceEEEE--eCCCCeEEECCCCCCchhceE--EEEECC-EEEEEeccCCCCccceEE
Confidence 222 3378889988632 2 23333 344456666554443332222 234444 55555 4444 367
Q ss_pred eecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEec
Q 043502 731 QYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSE 774 (949)
Q Consensus 731 EwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~s 774 (949)
.|+-.+..|..-..++.... +.++.. +.+++|+.+-
T Consensus 216 ~yd~~~~~W~~~~~~p~~r~----~~~~~~----~~~~l~v~GG 251 (315)
T 4asc_A 216 VYSITDNKWAPFEAFPQERS----SLSLVS----LVGTLYAIGG 251 (315)
T ss_dssp EEETTTTEEEEECCCSSCCB----SCEEEE----ETTEEEEEEE
T ss_pred EEECCCCeEEECCCCCCccc----ceeEEE----ECCEEEEECC
Confidence 79999999998875444321 222221 2456887764
No 49
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=88.53 E-value=14 Score=33.66 Aligned_cols=220 Identities=10% Similarity=0.015 Sum_probs=106.5
Q ss_pred ecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCcccccccccc-ceEEEeccCcEEEEEe-cCCCceeeeccCCCCCc
Q 043502 573 HGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNG-SLYMVDLYGSLLIRER-SSNELAWINCTAMRKGR 650 (949)
Q Consensus 573 h~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ng-sLf~vd~~GsL~~R~~-~g~~~~W~n~t~mr~G~ 650 (949)
..++.|+..+.||.+.=+=...+.-.-.-..|..++....=+-++ .|+....+|++.+=.- ..... ++ .
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~--------~~-~ 97 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGE--------DP-L 97 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTS--------CC--
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCC--------Cc-c
Confidence 566778888888876544444554444444444443333222333 4666677787653221 11100 00 0
Q ss_pred eeecCCCCCCCCCcceeec-ccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEccCceE
Q 043502 651 QVIGGPPWDGITGKAMKVT-AEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRL 729 (949)
Q Consensus 651 ~V~~G~pwdgipG~~~~vt-~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrL 729 (949)
..+.+ -.+....+. ..+.++.++.||.+.-+--.....+...|..| |..+ .-....++.+++.+.||.+
T Consensus 98 ~~~~~-----~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----v~~~-~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 98 YTLIG-----HQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNAS----VWDA-KVVSFSENKFLTASADKTI 167 (313)
T ss_dssp CEECC-----CSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECCSSC----EEEE-EEEETTTTEEEEEETTSCE
T ss_pred cchhh-----cccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccCCCc----eeEE-EEccCCCCEEEEEECCCCE
Confidence 11111 111111122 34556667778877655433333444455444 2111 1122357788999999999
Q ss_pred eeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC---eEEeecCCCCCCceeecC
Q 043502 730 YQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG---WNWVEHGTPGKGVTLVGS 806 (949)
Q Consensus 730 YEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g---W~WVdHGtP~~gvtvv~s 806 (949)
+-|+.....-.-.+.....+.. .+..| .+.++..+.||.++ .|+...+ ..+..|..|. ..+.-+
T Consensus 168 ~i~d~~~~~~~~~~~~~~~i~~----~~~~~-----~~~~~~~~~dg~i~--i~d~~~~~~~~~~~~~~~~i--~~~~~~ 234 (313)
T 3odt_A 168 KLWQNDKVIKTFSGIHNDVVRH----LAVVD-----DGHFISCSNDGLIK--LVDMHTGDVLRTYEGHESFV--YCIKLL 234 (313)
T ss_dssp EEEETTEEEEEECSSCSSCEEE----EEEEE-----TTEEEEEETTSEEE--EEETTTCCEEEEEECCSSCE--EEEEEC
T ss_pred EEEecCceEEEEeccCcccEEE----EEEcC-----CCeEEEccCCCeEE--EEECCchhhhhhhhcCCceE--EEEEEe
Confidence 9987444332221111111111 23333 22367777777664 4553321 2344565554 222222
Q ss_pred CCCcccCceEEEEecCCceEEEEEe
Q 043502 807 PGPCLHGNQLLLIGSDGKVYLRYMD 831 (949)
Q Consensus 807 pG~sf~gsqLFviGSDG~LYeRywd 831 (949)
| +++|+..+.||.+ +.|+
T Consensus 235 ~-----~~~l~~~~~dg~v--~iwd 252 (313)
T 3odt_A 235 P-----NGDIVSCGEDRTV--RIWS 252 (313)
T ss_dssp T-----TSCEEEEETTSEE--EEEC
T ss_pred c-----CCCEEEEecCCEE--EEEE
Confidence 2 2368888888886 4677
No 50
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.76 E-value=20 Score=34.35 Aligned_cols=195 Identities=11% Similarity=0.117 Sum_probs=98.5
Q ss_pred CCEEEEEecCCCCCcccccc-ccccceEEEeccC----cEEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceee
Q 043502 594 ESVWLWLRHDHSTPMRGVLG-NYNGSLYMVDLYG----SLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKV 668 (949)
Q Consensus 594 ~~~WlWl~H~h~T~m~g~~g-~~ngsLf~vd~~G----sL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~v 668 (949)
.+.|.=+. ..|.|..+... .++++||++.-.. +-..+ .+-..-.|.....|+..+. +.++ +
T Consensus 33 ~~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~-~d~~~~~W~~~~~~p~~r~-----------~~~~-~ 98 (306)
T 3ii7_A 33 DYSWTDIR-CPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDC-YNVVKDSWYSKLGPPTPRD-----------SLAA-C 98 (306)
T ss_dssp TTEEEECC-CCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEE-EETTTTEEEEEECCSSCCB-----------SCEE-E
T ss_pred CCCEecCC-CCCcccceeEEEEECCEEEEEeCCCCCCcceEEE-EeCCCCeEEECCCCCcccc-----------ceeE-E
Confidence 34444332 23444444333 3788888886433 11122 2344456877777765442 1222 2
Q ss_pred cccCcEEEEecC---C----eEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEcc----------CceEee
Q 043502 669 TAEDALFFVSKN---G----RLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR----------NGRLYQ 731 (949)
Q Consensus 669 t~~dklF~vt~~---G----rLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~----------NGrLYE 731 (949)
..++++|+..-. . .++.+ ....-+|......|-..-..+ ...+ +++||+.|. -..++.
T Consensus 99 ~~~~~iyv~GG~~~~~~~~~~~~~~--d~~~~~W~~~~~~p~~r~~~~--~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 173 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNSALYLFECY--DTRTESWHTKPSMLTQRCSHG--MVEA-NGLIYVCGGSLGNNVSGRVLNSCEV 173 (306)
T ss_dssp EETTEEEEECCBBTTBSCCCCEEEE--ETTTTEEEEECCCSSCCBSCE--EEEE-TTEEEEECCEESCTTTCEECCCEEE
T ss_pred EECCEEEEECCCCCCCcEeeeEEEE--eCCCCceEeCCCCcCCcceeE--EEEE-CCEEEEECCCCCCCCcccccceEEE
Confidence 358888887532 1 23322 444556776665554443222 2234 557777764 233667
Q ss_pred ecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecC------CCeEEEEEeCCCCeEEeecCCCCCCceeec
Q 043502 732 YNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSED------GGLVEYHWNTWDGWNWVEHGTPGKGVTLVG 805 (949)
Q Consensus 732 wNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~sn------G~LyEr~Wntg~gW~WVdHGtP~~gvtvv~ 805 (949)
|+-.+..|..-...+... .+.++.. +.+++|+.+.. ..++. |=-....|. .-+..+.+- .
T Consensus 174 yd~~~~~W~~~~~~p~~r----~~~~~~~----~~~~i~v~GG~~~~~~~~~~~~-yd~~~~~W~--~~~~~p~~r---~ 239 (306)
T 3ii7_A 174 YDPATETWTELCPMIEAR----KNHGLVF----VKDKIFAVGGQNGLGGLDNVEY-YDIKLNEWK--MVSPMPWKG---V 239 (306)
T ss_dssp EETTTTEEEEECCCSSCC----BSCEEEE----ETTEEEEECCEETTEEBCCEEE-EETTTTEEE--ECCCCSCCB---S
T ss_pred eCCCCCeEEECCCccchh----hcceEEE----ECCEEEEEeCCCCCCCCceEEE-eeCCCCcEE--ECCCCCCCc---c
Confidence 988888998876433321 1222221 24568888642 22333 322233444 444322111 1
Q ss_pred CCCCcccCceEEEEec
Q 043502 806 SPGPCLHGNQLLLIGS 821 (949)
Q Consensus 806 spG~sf~gsqLFviGS 821 (949)
....+..+++||++|+
T Consensus 240 ~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 240 TVKCAAVGSIVYVLAG 255 (306)
T ss_dssp CCEEEEETTEEEEEEC
T ss_pred ceeEEEECCEEEEEeC
Confidence 2223445889999987
No 51
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=87.73 E-value=1.2 Score=46.03 Aligned_cols=61 Identities=20% Similarity=0.425 Sum_probs=42.1
Q ss_pred ccceEEEeccCcEEEEEe-cCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEecCCeEeEE
Q 043502 616 NGSLYMVDLYGSLLIRER-SSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQF 686 (949)
Q Consensus 616 ngsLf~vd~~GsL~~R~~-~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~ 686 (949)
||.||.| .+|.|+...- ++..-.|+.. .++|=.+ =|++. .++-+-.+..||.|+ ||+||..
T Consensus 51 ~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s-----~t~IG~~-Gw~~F--~a~~fD~~G~LYav~-dG~iyr~ 112 (236)
T 1tl2_A 51 GGELYGV-LNDKIYKGTPPTHDNDNWMGR-----AKKIGNG-GWNQF--QFLFFDPNGYLYAVS-KDKLYKA 112 (236)
T ss_dssp TSCEEEE-ETTEEEEESCCCSTTCCHHHH-----CEEEECS-CGGGC--SEEEECTTSCEEEEE-TTEEEEE
T ss_pred CccEEEE-eCCeEEEECCCCCCccccccc-----ccEeccc-ccccc--eEEEECCCCCEEEeC-CCEEEEe
Confidence 8999999 9999988776 6667777764 2333222 36652 344466888999994 4988843
No 52
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=87.46 E-value=39 Score=37.33 Aligned_cols=247 Identities=14% Similarity=0.181 Sum_probs=112.4
Q ss_pred eeeeecceeEEEecccCchheeeccceeEEEccC-CCc-----cccCCeEEEEEEe-ce-eeehhccCceEEEecCCCCc
Q 043502 132 SLTKMSETSIWVTGVSGSVYERFWNGVQWVIAPH-DLP-----ISAGPAISVFIVN-QR-ILALAEAGVLYQMQLGDNSQ 203 (949)
Q Consensus 132 sltkmsetsiwvtgesgsiyerfwng~~wviaph-dlp-----~s~g~ai~vfivn-~t-ilalseag~lyqmql~e~sq 203 (949)
++..=++--|||--+.|- -|| +|.+|..-+| +-| ++.-...+++.-. .. |...++.|-||........
T Consensus 23 ~I~qD~~G~lWigT~~GL--~ry-DG~~f~~~~~~~~~~~~~~l~~n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~- 98 (781)
T 3v9f_A 23 SITQDKQGFLWFATEEGL--NKF-DGTRFITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQS- 98 (781)
T ss_dssp EEEECTTSCEEEEESSCE--EEE-CSSSEEEECCCSSCSSSCCCSCSCEEEEEECSSSSEEEEEESSSCEEEEETTTTE-
T ss_pred EEEECCCCCEEEccCCcC--ccc-cCCceEEEEcCCCCCccccccccccceEEEcCCCCEEEEEeCCCCcceECCCCCe-
Confidence 566667778999888883 455 7888887766 122 2223334444433 33 5555555235554432111
Q ss_pred ceEEEeeccccccccccccccceeEeecceeecC--CcEEEEEecCCceeEee-ccCCCccccC---CCCCCCceeEEee
Q 043502 204 PIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQD--GERVYFCTKNGLLLELS-EVEPPRWLNH---GRPPGANVAAIAD 277 (949)
Q Consensus 204 piw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~d--g~~lff~~knG~LLe~t-el~p~rW~~h---g~PPga~VA~I~D 277 (949)
...|..... ....-.+. .|.+ ++... ..+|++.+.++-|..+. +-.+++=... ...|...|.+|.-
T Consensus 99 --f~~~~~~~~---~~~~l~~~--~i~~-i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 170 (781)
T 3v9f_A 99 --FSVYQYNPE---DPQSLITN--DVTH-ITSSVQAGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATE 170 (781)
T ss_dssp --EEEECCCTT---CSSSCSCS--CEEE-EEECSSTTSEEEEEESSSCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEE
T ss_pred --EEeeccccC---CCCCcccC--cceE-EEecCccCCCEEEEECCCCeeEEECCCCeEEeeccCcccCCCccceEEEEE
Confidence 122211100 00000001 1221 22222 35688888444455554 2222221111 1123445555542
Q ss_pred ccccCCceEEEEccCCceeeeccCCchhhhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeecc
Q 043502 278 AGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQR 357 (949)
Q Consensus 278 ~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qr 357 (949)
. +.+.+++-..++-||.||..++ ..+ ++...... ..++. ...+..+.-+....|++-|.+ +|.-+.....
T Consensus 171 d---~~g~lwigt~~~Gl~~~~~~~~-~~~-~~~~~~~~-~~~l~---~~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~ 240 (781)
T 3v9f_A 171 A---EDGKLYIGHVEGGLSILSLNDK-SVK-HFVHDPQN-PNSLP---GNDVRCIYKDTNGNIWIGTSK-GLALFNANTE 240 (781)
T ss_dssp E---ETTEEEEEETTTEEEEEETTTT-EEE-EECC---------C---CSSEEEEEECTTCCEEEEETT-EEEEEETTTT
T ss_pred C---CCCCEEEEecCCCeEEEcCCCC-ceE-eeecCCCC-cccCC---CCceeEEEEcCCCCEEEEeCC-cHheECCCCC
Confidence 1 2467777666657999998876 332 22211110 00111 122333444444578888876 7776665556
Q ss_pred ceeEEEcCC--CCCCcccccceeccCCccccceEEEEEcccceEEEEee
Q 043502 358 KWKWIIHGS--PEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQI 404 (949)
Q Consensus 358 kWkWi~HGt--P~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~~ 404 (949)
++.-+.|.. |..-.-..|.-+.+|.. -.|++.|..+-+|.|..
T Consensus 241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~----g~lWigt~~~Gl~~~~~ 285 (781)
T 3v9f_A 241 TFTNFHNNPGNIHGALSSYIFSIKQLKD----NKLWIATELNGIMILDL 285 (781)
T ss_dssp EEEC-----------CCCCEEEEEECTT----SEEEEEESSSCEEEEET
T ss_pred cEEEEEcCCCccccccCceEEEEEECCC----CCEEEEeCCCCeEEECC
Confidence 666555432 11111123444455432 34776665466776654
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=87.41 E-value=12 Score=37.09 Aligned_cols=185 Identities=15% Similarity=0.047 Sum_probs=91.5
Q ss_pred eceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEeeccCCCc
Q 043502 181 NQRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELSEVEPPR 260 (949)
Q Consensus 181 n~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~tel~p~r 260 (949)
++.++|.+..|.+|=..+.......-.+.. .. -.|.+=..+.||..|+.+..+|.+.-+. ++..+
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~------------~~--~~v~~v~~s~~~~~l~~~~~dg~i~iwd-~~~~~ 167 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETD------------ES--TYVASVKWSHDGSFLSVGLGNGLVDIYD-VESQT 167 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECC------------TT--CCEEEEEECTTSSEEEEEETTSCEEEEE-TTTCC
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecC------------CC--CCEEEEEECCCCCEEEEECCCCeEEEEE-CcCCe
Confidence 345666777777766655433221111110 00 1133334677888888888888765543 11111
Q ss_pred cccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhccccccccccccccCcccccccccCCceeeE
Q 043502 261 WLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSL 340 (949)
Q Consensus 261 W~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SL 340 (949)
-...-......|.+++= .++.+++.+.+|.++-||-.+... .......|. ..-....+++ .| --|
T Consensus 168 ~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~------~~v~~~~~~~-~~---~~l 232 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSW----NRHVLSSGSRSGAIHHHDVRIANH-QIGTLQGHS------SEVCGLAWRS-DG---LQL 232 (401)
T ss_dssp EEEEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSSSC-EEEEEECCS------SCEEEEEECT-TS---SEE
T ss_pred EEEEecCCCCceEEEEE----CCCEEEEEcCCCCEEEEecccCcc-eeeEEcCCC------CCeeEEEEcC-CC---CEE
Confidence 11111122344555543 568999999999999999774310 011111111 0111111111 12 123
Q ss_pred EEEecCCcEEEEEeeccc--eeEEEcCCCCCCcccccceeccCCccccceEEEEEcc---cceEEEEeec
Q 043502 341 FLLTKGGNLVERRIQQRK--WKWIIHGSPEDTHLTSITPVQQDESNEKFFSLFLTTS---AGAVFEYQIP 405 (949)
Q Consensus 341 Flltk~G~LVErr~~qrk--WkWi~HGtP~~~~l~siT~v~~d~~~~~~~sLF~t~S---~G~Vyey~~~ 405 (949)
+.-+.||.+.-+.+...+ .....|..+ ++++.-. + ++..|+++++ ||.++.|.+.
T Consensus 233 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----v~~~~~~--p----~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 233 ASGGNDNVVQIWDARSSIPKFTKTNHNAA----VKAVAWC--P----WQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp EEEETTSCEEEEETTCSSEEEEECCCSSC----CCEEEEC--T----TSTTEEEEECCTTTCEEEEEETT
T ss_pred EEEeCCCeEEEccCCCCCccEEecCCcce----EEEEEEC--C----CCCCEEEEecCCCCCEEEEEECC
Confidence 344567777666555322 222223332 3433322 2 2345888876 9999999884
No 54
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=87.18 E-value=40 Score=37.27 Aligned_cols=233 Identities=16% Similarity=0.249 Sum_probs=112.1
Q ss_pred eeeeecceeEEEecccCchheeeccceeEEEccCCC--cc--ccCCeEEEEEEe-ceeeehhccCceEEEecCCCCcceE
Q 043502 132 SLTKMSETSIWVTGVSGSVYERFWNGVQWVIAPHDL--PI--SAGPAISVFIVN-QRILALAEAGVLYQMQLGDNSQPIW 206 (949)
Q Consensus 132 sltkmsetsiwvtgesgsiyerfwng~~wviaphdl--p~--s~g~ai~vfivn-~tilalseag~lyqmql~e~sqpiw 206 (949)
++..=++--|||--+.|- -|| +|.+|..-.|+. |- +.....+++.-. ..|..-++.| ||....... + .
T Consensus 47 ~I~qD~~G~lWigT~~GL--~ry-DG~~f~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWigT~~G-l~~yd~~~~-~--f 119 (795)
T 4a2l_A 47 SIDQDKRGNMWFATYDGV--NKY-DGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDG-LSRYDEEKD-I--F 119 (795)
T ss_dssp EEEECTTSCEEEEETTEE--EEE-CSSCEEEECCCTTCTTSCSCSCEEEEEECTTSCEEEEESSC-EEEEETTTT-E--E
T ss_pred EEEEcCCCCEEEeecCcC--ccc-CCCceEEEeCCCCCCCcccccceeEEEECCCCCEEEEeCCc-hheeCCCCC-e--E
Confidence 556666778999777773 566 899998877753 22 223334444332 2455555545 344432211 0 1
Q ss_pred EEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee-ccCCCccccCCCCCCCceeEE-eeccccCCc
Q 043502 207 VEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS-EVEPPRWLNHGRPPGANVAAI-ADAGNVRPE 284 (949)
Q Consensus 207 ~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t-el~p~rW~~hg~PPga~VA~I-~D~~~~R~~ 284 (949)
..|.+... ...+ .|.+ ++....-+|++.+.+| |..+. +-.+++-...+.|....|.+| .|. .+
T Consensus 120 ~~~~~~~~-------~~~~--~i~~-i~~d~~g~lwi~t~~g-l~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~----~g 184 (795)
T 4a2l_A 120 QNFFYEKN-------GKHL--QVNG-IEEISPEQLLISTPEG-LIMFDIKESKFIDDSFSTAMHKTIASTLYRQ----GD 184 (795)
T ss_dssp EEECCEET-------TEEC--CCCE-EEEEETTEEEEEETTE-EEEEETTTTEEECSSSCHHHHTCCEEEEEEE----TT
T ss_pred Eecccccc-------CCCc--eEEE-EEECCCCCEEEEECCc-eEEEECCCCEEEeccCCCCCCcceEEEEECC----CC
Confidence 22221100 0000 0332 2222233577777755 55444 222222111111111114444 332 35
Q ss_pred eEEEEccCCceeeeccCCchhhhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccceeEEEc
Q 043502 285 VVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKWKWIIH 364 (949)
Q Consensus 285 vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkWkWi~H 364 (949)
.+++...++-||.||..++ .++.....+ ....+..+.-+....|++-|.+++|..+......++-+.|
T Consensus 185 ~lwigt~~~Gl~~~~~~~~-~~~~~~~~~-----------~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 185 QIYIGTSTDGLYTYSITQK-TFEKVIPIL-----------GTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp EEEEEESSSCEEEEETTTC-CEEECC---------------CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECC
T ss_pred CEEEEECCCCEEEEeCCCC-eEEEecCCC-----------CCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeec
Confidence 6777666567999998776 332211000 0112223332333478888888788777665666777766
Q ss_pred CC--CCCCcccccceeccCCccccceEEEEEcccceEEEEe
Q 043502 365 GS--PEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQ 403 (949)
Q Consensus 365 Gt--P~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~ 403 (949)
.. |..-.-..|.-+.+|.. -.|++.|..| ++.|.
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~----g~lWigt~~G-l~~~~ 288 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQ----NRLWIGTFND-LNIYH 288 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTT----SCEEEEESSC-EEEEE
T ss_pred CCCCccccCCCeEEEEEEcCC----CCEEEEeCCh-hheEc
Confidence 42 22111133445555432 2377766554 66654
No 55
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.72 E-value=20 Score=33.38 Aligned_cols=111 Identities=14% Similarity=0.186 Sum_probs=59.5
Q ss_pred eeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecce-eecCCcEEEEEecCCceeEee-ccCCCc
Q 043502 183 RILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGV-VSQDGERVYFCTKNGLLLELS-EVEPPR 260 (949)
Q Consensus 183 tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gv-vs~dg~~lff~~knG~LLe~t-el~p~r 260 (949)
.|++-++.|.++-..+.....|+-. +.+.... .......+.-++ .+.||..|+.+..+|.+.-+. .-....
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~------~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVAN-MEPVQGE------NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEE-ECCCTTS------CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEeCCCeEEEEeCCCCCCccee-ccccCCC------CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 5666678888877777655544432 2111000 011112222222 678999999898888776655 222222
Q ss_pred cccCCCCCCCceeEEeecc-ccCCceEEEEccCCceeeeccCCc
Q 043502 261 WLNHGRPPGANVAAIADAG-NVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 261 W~~hg~PPga~VA~I~D~~-~~R~~vVftiss~GdLYeYnr~tk 303 (949)
..... ...|.+|+=.. ....+.+++.+.+|.++-||-.+.
T Consensus 204 ~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 204 WETNI---KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp EEEEC---SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred eecCC---CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 22111 22344442111 114578999999999999997664
No 56
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=85.71 E-value=26 Score=34.46 Aligned_cols=68 Identities=12% Similarity=0.031 Sum_probs=41.6
Q ss_pred eecCCcEEEEEecCCceeEee-ccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 234 VSQDGERVYFCTKNGLLLELS-EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 234 vs~dg~~lff~~knG~LLe~t-el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
.+.||..|+.++.+|.+.-+. +-.++...-.+.|-...|-+++=.. ..+.+++.+.+|.++-||-.+.
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE--ECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT--TSCEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC--CCCEEEEEcCCCeEEEEEcCCc
Confidence 567889999999988876554 2222222222211223444443111 2578999999999999997664
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=85.44 E-value=8.5 Score=37.35 Aligned_cols=67 Identities=18% Similarity=0.162 Sum_probs=39.9
Q ss_pred eecCCcEEEEEecCCceeEeec--cCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 234 VSQDGERVYFCTKNGLLLELSE--VEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 234 vs~dg~~lff~~knG~LLe~te--l~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
.|.||+.|+.++.+|.+.-+.. -+++.-... +....|.+|+=... .+..+++.+.+|.++-||-.+.
T Consensus 255 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 255 FGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS--KFTCSCNSLTVDGN-NANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp SSCTTEEEEEEETTSCEEEEETTTCCEEEEECC--TTSSCEEEEEECSS-CTTEEEEEETTSEEEEEETTCT
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCCceeEEccc--ccCCCceeEEEeCC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 4689999999999998655431 111111111 11233444431111 1138999999999999998764
No 58
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=85.42 E-value=28 Score=33.70 Aligned_cols=195 Identities=16% Similarity=0.312 Sum_probs=101.3
Q ss_pred cCCEEEEEecCCCCCcccccc-ccccceEEEecc-----C-----cEEEEEecCCCceeeeccCCCCCceeecCCCCCCC
Q 043502 593 AESVWLWLRHDHSTPMRGVLG-NYNGSLYMVDLY-----G-----SLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGI 661 (949)
Q Consensus 593 ~~~~WlWl~H~h~T~m~g~~g-~~ngsLf~vd~~-----G-----sL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgi 661 (949)
..+.|.=+. ..|+|..+... .++++||+..-. + .++ ..+-..-.|.....|+..+.
T Consensus 47 ~~~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~--~~d~~~~~W~~~~~~p~~r~---------- 113 (308)
T 1zgk_A 47 SNGTWLRLA-DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALD--CYNPMTNQWSPCAPMSVPRN---------- 113 (308)
T ss_dssp TTTEEEECC-CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEE--EEETTTTEEEECCCCSSCCB----------
T ss_pred CCCeEeECC-CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEE--EECCCCCeEeECCCCCcCcc----------
Confidence 345565552 34555555433 389999998643 1 122 23445567888877765442
Q ss_pred CCcceeecccCcEEEEec------CCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEcc-C-----ceE
Q 043502 662 TGKAMKVTAEDALFFVSK------NGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR-N-----GRL 729 (949)
Q Consensus 662 pG~~~~vt~~dklF~vt~------~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~-N-----GrL 729 (949)
+.++ +..++++|+..- ...++.+ ....-+|......|...-..+ ..++ +++||+.|. + ..+
T Consensus 114 -~~~~-~~~~~~iyv~GG~~~~~~~~~~~~y--d~~~~~W~~~~~~p~~r~~~~--~~~~-~~~iyv~GG~~~~~~~~~~ 186 (308)
T 1zgk_A 114 -RIGV-GVIDGHIYAVGGSHGCIHHNSVERY--EPERDEWHLVAPMLTRRIGVG--VAVL-NRLLYAVGGFDGTNRLNSA 186 (308)
T ss_dssp -TCEE-EEETTEEEEECCEETTEECCCEEEE--ETTTTEEEECCCCSSCCBSCE--EEEE-TTEEEEECCBCSSCBCCCE
T ss_pred -ccEE-EEECCEEEEEcCCCCCcccccEEEE--CCCCCeEeECCCCCccccceE--EEEE-CCEEEEEeCCCCCCcCceE
Confidence 1222 335888998742 1223333 344456666555444333222 2234 457777653 3 347
Q ss_pred eeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecC------CCeEEEEEeCCCCeEEeecCCCCCCcee
Q 043502 730 YQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSED------GGLVEYHWNTWDGWNWVEHGTPGKGVTL 803 (949)
Q Consensus 730 YEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~sn------G~LyEr~Wntg~gW~WVdHGtP~~gvtv 803 (949)
+.|+-.+..|..-...+... .+.++.. +..++|+.+.. ..++.+--. ... |..-..++.+-
T Consensus 187 ~~yd~~~~~W~~~~~~p~~r----~~~~~~~----~~~~iyv~GG~~~~~~~~~v~~yd~~-~~~--W~~~~~~p~~r-- 253 (308)
T 1zgk_A 187 ECYYPERNEWRMITAMNTIR----SGAGVCV----LHNCIYAAGGYDGQDQLNSVERYDVE-TET--WTFVAPMKHRR-- 253 (308)
T ss_dssp EEEETTTTEEEECCCCSSCC----BSCEEEE----ETTEEEEECCBCSSSBCCCEEEEETT-TTE--EEECCCCSSCC--
T ss_pred EEEeCCCCeEeeCCCCCCcc----ccceEEE----ECCEEEEEeCCCCCCccceEEEEeCC-CCc--EEECCCCCCCc--
Confidence 77998889998875433321 1222221 24678888742 234443222 334 44444322111
Q ss_pred ecCCCCcccCceEEEEec
Q 043502 804 VGSPGPCLHGNQLLLIGS 821 (949)
Q Consensus 804 v~spG~sf~gsqLFviGS 821 (949)
.....+..+++||++|+
T Consensus 254 -~~~~~~~~~~~i~v~GG 270 (308)
T 1zgk_A 254 -SALGITVHQGRIYVLGG 270 (308)
T ss_dssp -BSCEEEEETTEEEEECC
T ss_pred -cceEEEEECCEEEEEcC
Confidence 12233455789999986
No 59
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=85.36 E-value=32 Score=35.76 Aligned_cols=214 Identities=12% Similarity=0.168 Sum_probs=104.3
Q ss_pred EEEEEEe--ceeeehhccCceEEEecCCCCcceEEEee-ccccccccccccc-cceeEeecceeecCCcEEEEEecCCce
Q 043502 175 ISVFIVN--QRILALAEAGVLYQMQLGDNSQPIWVEFI-PAIDQSINGEAEQ-RSVIQIKSGVVSQDGERVYFCTKNGLL 250 (949)
Q Consensus 175 i~vfivn--~tilalseag~lyqmql~e~sqpiw~ef~-~~~~~~~~~~~~q-s~~~~ik~gvvs~dg~~lff~~knG~L 250 (949)
+.+|+.| +.||-++..|.+|++...|-..-=|...- |-.+-+.+.+.++ -+++.+++ . .++..|+|+|++|..
T Consensus 42 ~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~-~--~~~~~ll~~T~~G~i 118 (323)
T 1wp5_A 42 LAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPIND-F--ELNGYFLFVTRNGMV 118 (323)
T ss_dssp EEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESC-T--TSSCEEEEEETTSEE
T ss_pred EEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecc-c--CCCceEEEEeCCCeE
Confidence 3556664 57999999999999966542211111100 1011122222232 12233321 0 236789999999987
Q ss_pred eEee--ccCCCc----cccCCCCCCCceeEEeeccccC-CceEEEEccCCceeeeccCCchhhhhhcccccccccccccc
Q 043502 251 LELS--EVEPPR----WLNHGRPPGANVAAIADAGNVR-PEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIP 323 (949)
Q Consensus 251 Le~t--el~p~r----W~~hg~PPga~VA~I~D~~~~R-~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~ 323 (949)
-... +++..| ..-..-..|-.+.++. ... .+-|+.++++|+++.|+-..=|.-.+. +.+... ..|.
T Consensus 119 Krt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~---~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~--a~GV~~-i~L~- 191 (323)
T 1wp5_A 119 KKTELKHYKAQRYSKPLTGINLKNDDQVVDVH---LTDGMNELFLVTHNGYALWFDESEVSIVGVR--AAGVKG-MNLK- 191 (323)
T ss_dssp EEEEGGGGCCSCCSSCEECSCCCTTCCEEEEE---EECSCSEEEEEETTSEEEEEEGGGSCBCCSS--CCCEEC-CCCC-
T ss_pred EEeEHHHhhhccccCceEEEEeCCCCEEEEEE---EeCCCCEEEEEeCCCcEEEEEHHHCcccCCC--CcCEEE-EEeC-
Confidence 6655 555433 1112223444443322 111 245889999999999986544333221 111100 0110
Q ss_pred Ccccccccc--cCCceeeEEEEecCCcEEEEEe-----ecccee--EEEcCCCC-CCcccccceeccCCccccceEEEEE
Q 043502 324 SMACTLHGL--IGDHSTSLFLLTKGGNLVERRI-----QQRKWK--WIIHGSPE-DTHLTSITPVQQDESNEKFFSLFLT 393 (949)
Q Consensus 324 s~g~t~~gl--~g~~S~SLFlltk~G~LVErr~-----~qrkWk--Wi~HGtP~-~~~l~siT~v~~d~~~~~~~sLF~t 393 (949)
-+-.+.++ ..+..-.|+++|+.|..-.-.+ ..|+=+ -..-..++ .+.|-.+.++..+ -.++++
T Consensus 192 -~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~------~~i~~i 264 (323)
T 1wp5_A 192 -EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDS------DTIYLQ 264 (323)
T ss_dssp -TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTT------CEEEEE
T ss_pred -CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCC------CeEEEE
Confidence 01111111 0011115888888887433333 322211 11112332 2244444444221 359999
Q ss_pred cccceEEEEeec
Q 043502 394 TSAGAVFEYQIP 405 (949)
Q Consensus 394 ~S~G~Vyey~~~ 405 (949)
|+.|++.+..+.
T Consensus 265 t~~g~~ir~~~~ 276 (323)
T 1wp5_A 265 TEKSFIETIKVG 276 (323)
T ss_dssp ETTSCEEEEEGG
T ss_pred eCCCeEEEEEhh
Confidence 999999998883
No 60
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=85.22 E-value=24 Score=32.82 Aligned_cols=190 Identities=15% Similarity=0.034 Sum_probs=101.0
Q ss_pred eeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccCCCc
Q 043502 183 RILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVEPPR 260 (949)
Q Consensus 183 tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~p~r 260 (949)
.|++-++.|.++-..+....+.+=..+...-. .|.+=..+.||..|+.+..+|.+.-.. .-+..+
T Consensus 56 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~-------------~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG-------------PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ 122 (368)
T ss_dssp EEEEEETTSEEEEEEECTTSCEEEEEEEECSS-------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCceeEEEeccccC-------------CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee
Confidence 45555677777666665533333222211100 123334566777777777777655443 122222
Q ss_pred cccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhccccccccccccccCcccccccccCCceeeE
Q 043502 261 WLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSL 340 (949)
Q Consensus 261 W~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SL 340 (949)
-..|. ..|.+|.=...-..+.+++.+.+|.++-||-.+. .-...+..+. ...++. ..+ -.+
T Consensus 123 ~~~~~----~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~----------~~~~~~-~~~---~~~ 183 (368)
T 3mmy_A 123 IAQHD----APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS-NPMMVLQLPE----------RCYCAD-VIY---PMA 183 (368)
T ss_dssp EEECS----SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS-SCSEEEECSS----------CEEEEE-EET---TEE
T ss_pred ecccc----CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC-cEEEEEecCC----------CceEEE-ecC---Cee
Confidence 22222 3344443111122357889999999999997654 1011111111 111111 111 156
Q ss_pred EEEecCCcEEEEEeeccceeEEEcCCCCCCcccccceeccCCccccceEEEEEcccceEEEEeecc
Q 043502 341 FLLTKGGNLVERRIQQRKWKWIIHGSPEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQIPK 406 (949)
Q Consensus 341 Flltk~G~LVErr~~qrkWkWi~HGtP~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~~~k 406 (949)
+..+.+|.+.=+.+....=.+..-..|..+....+.......... ..|+..+.||.|..|.+..
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dg~i~i~~~~~ 247 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP--TGFALGSIEGRVAIHYINP 247 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE--EEEEEEETTSEEEEEESSC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC--CeEEEecCCCcEEEEecCC
Confidence 777888888888887544455555556656555555444433222 3488888999999998844
No 61
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=84.78 E-value=6.9 Score=39.66 Aligned_cols=59 Identities=5% Similarity=0.060 Sum_probs=43.2
Q ss_pred cEEEEEecCCceeEee--ccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeec
Q 043502 239 ERVYFCTKNGLLLELS--EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYD 299 (949)
Q Consensus 239 ~~lff~~knG~LLe~t--el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYn 299 (949)
..|.|.|.+|++..+. ++..-+|..- -++|.+|.++.- ..|-...+++++++|-.-...
T Consensus 36 ~~ll~fT~~G~v~~~~~~~lp~~~~~~l-l~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~ 96 (276)
T 3no0_A 36 EGLFLVSNRGRVYWIAGSQALQGSKVSL-KSREEKIVGAFI-REKFGNRLLLATKKGYVKKIP 96 (276)
T ss_dssp SCEEEEETTSEEEEECSHHHHTSEECCC-SSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEE
T ss_pred CEEEEEcCCCeEEEEEhhhCccCccccc-CCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEE
Confidence 3789999999998887 6755567665 667888887765 444446788888888765543
No 62
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=84.75 E-value=28 Score=33.16 Aligned_cols=158 Identities=15% Similarity=0.252 Sum_probs=85.8
Q ss_pred ceEEEEecCceEEEEee--C----CeeEEEEecCCEEEEEecCCCCCccccccc-cccceEEEeccC-c----EEEEEec
Q 043502 567 FRLRVMHGSRSFFLITD--G----GFTFEYLYAESVWLWLRHDHSTPMRGVLGN-YNGSLYMVDLYG-S----LLIRERS 634 (949)
Q Consensus 567 f~~rvmh~~~s~fliTd--~----G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~-~ngsLf~vd~~G-s----L~~R~~~ 634 (949)
.|--+.. +.++|++-- + ..++.|=-..+.|.-+. ..|.+..+...+ ++++||++.-.. . -.++ .+
T Consensus 105 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-~d 181 (301)
T 2vpj_A 105 LAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG-DMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEK-YD 181 (301)
T ss_dssp SCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE-ECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEE-EE
T ss_pred ceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECC-CCCCCcccceEEEECCEEEEECCCCCCcccceEEE-Ee
Confidence 3444444 467888731 1 12333333577888875 345565554444 899999985321 1 1222 23
Q ss_pred CCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEecC------CeEeEEEEeceeeeeecCCCCCCcceEE
Q 043502 635 SNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKN------GRLLQFTVALRKFKWKDCRHPLDTKVAC 708 (949)
Q Consensus 635 g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~------GrLlq~tva~rkwkW~dhg~PPgTkIat 708 (949)
-..-.|.....|+..+. +.++ +..++++|++.-. ..++.+- ...-+|.....+|-.....
T Consensus 182 ~~~~~W~~~~~~p~~r~-----------~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd--~~~~~W~~~~~~p~~r~~~ 247 (301)
T 2vpj_A 182 PHTGHWTNVTPMATKRS-----------GAGV-ALLNDHIYVVGGFDGTAHLSSVEAYN--IRTDSWTTVTSMTTPRCYV 247 (301)
T ss_dssp TTTTEEEEECCCSSCCB-----------SCEE-EEETTEEEEECCBCSSSBCCCEEEEE--TTTTEEEEECCCSSCCBSC
T ss_pred CCCCcEEeCCCCCcccc-----------cceE-EEECCEEEEEeCCCCCcccceEEEEe--CCCCcEEECCCCCCcccce
Confidence 34457877777665443 2222 3368889888632 2344443 3444566555554443322
Q ss_pred eecccccccCeEEEEc-cCc-----eEeeecCceeeeeecCC
Q 043502 709 IVDQELFRENIVFVVG-RNG-----RLYQYNKVTELWHEHYQ 744 (949)
Q Consensus 709 a~d~~~~r~~~iFvvG-~NG-----rLYEwNg~TW~WhdHGk 744 (949)
+ ..++ +++||+.| .++ .++.|+-.+..|.....
T Consensus 248 ~--~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 286 (301)
T 2vpj_A 248 G--ATVL-RGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTS 286 (301)
T ss_dssp E--EEEE-TTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEE
T ss_pred e--EEEE-CCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCC
Confidence 2 2344 45666665 443 46678888888877643
No 63
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=84.68 E-value=45 Score=35.51 Aligned_cols=119 Identities=17% Similarity=0.263 Sum_probs=72.7
Q ss_pred eeEEEecccCchheeeccceeEEEccCCCccc----cC-------------CeEEEEEE-----eceeeehhccCceEEE
Q 043502 139 TSIWVTGVSGSVYERFWNGVQWVIAPHDLPIS----AG-------------PAISVFIV-----NQRILALAEAGVLYQM 196 (949)
Q Consensus 139 tsiwvtgesgsiyerfwng~~wviaphdlp~s----~g-------------~ai~vfiv-----n~tilalseag~lyqm 196 (949)
..|-+.-..|.+|- +.-||||.. .| .-++++.+ ++.||-+++.|..-.+
T Consensus 58 d~ll~fT~~G~~~~---------~~~~eip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt 128 (370)
T 3l6v_A 58 DTLLTFTSSGKVFW---------LPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKT 128 (370)
T ss_dssp CEEEEEETTSEEEE---------EEGGGSCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEE
T ss_pred CEEEEEeCCCeEEE---------EEHHHCcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEe
Confidence 34666667777762 355788754 33 23556666 3479999999999999
Q ss_pred ecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccCCCccccCC-----CCCC
Q 043502 197 QLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVEPPRWLNHG-----RPPG 269 (949)
Q Consensus 197 ql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~p~rW~~hg-----~PPg 269 (949)
.|+|-..+- .-.+.-+.++ +....+.+ .+..+...|++.|++|++|.|. ++++....--| -.+|
T Consensus 129 ~l~e~~~~~----~~G~~ai~L~--~~d~lv~v---~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~ 199 (370)
T 3l6v_A 129 PLSEFAFRL----ARGKIAINLD--EGDALVGV---ALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKG 199 (370)
T ss_dssp EGGGGCSCC----TTCEESSCCC--TTCCEEEE---EEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT
T ss_pred EHHHhhccc----CCceEEEEeC--CCCEEEEE---EEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCC
Confidence 998765421 1122222222 22233322 2334566899999999999998 68887666544 2345
Q ss_pred CceeEE
Q 043502 270 ANVAAI 275 (949)
Q Consensus 270 a~VA~I 275 (949)
-.|.++
T Consensus 200 d~Vv~~ 205 (370)
T 3l6v_A 200 EEVVSL 205 (370)
T ss_dssp CCEEEE
T ss_pred CEEEEE
Confidence 555543
No 64
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=84.62 E-value=20 Score=38.25 Aligned_cols=211 Identities=15% Similarity=0.197 Sum_probs=118.9
Q ss_pred eecCCcEEEEEecCCceeEee--ccCCCccccCCC--------CCCCceeEEeeccccCC-ceEEEEccCCc-----eee
Q 043502 234 VSQDGERVYFCTKNGLLLELS--EVEPPRWLNHGR--------PPGANVAAIADAGNVRP-EVVYTISSTGD-----LYE 297 (949)
Q Consensus 234 vs~dg~~lff~~knG~LLe~t--el~p~rW~~hg~--------PPga~VA~I~D~~~~R~-~vVftiss~Gd-----LYe 297 (949)
+......|+|.|.+|+++.|. +|+...|+..|. .+|-+|.++.-...+-+ .-+++++++|- |-+
T Consensus 53 ~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e 132 (370)
T 3l6v_A 53 LVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSE 132 (370)
T ss_dssp EECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGG
T ss_pred EecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHH
Confidence 444557899999999999998 799999998884 46888888776554543 37889999996 456
Q ss_pred eccCCchhhhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeec-cceeEEEcC-----CCCCCc
Q 043502 298 YDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQ-RKWKWIIHG-----SPEDTH 371 (949)
Q Consensus 298 Ynr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~q-rkWkWi~HG-----tP~~~~ 371 (949)
|....+ +-+..=.|-.+-.|....-+ .+ .--|+|+|+.|.++-...++ +--..---| -..++.
T Consensus 133 ~~~~~~----~G~~ai~L~~~d~lv~v~~~-----~~--~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~ 201 (370)
T 3l6v_A 133 FAFRLA----RGKIAINLDEGDALVGVALT-----DG--DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEE 201 (370)
T ss_dssp GCSCCT----TCEESSCCCTTCCEEEEEEE-----CS--CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCC
T ss_pred hhcccC----CceEEEEeCCCCEEEEEEEe-----CC--CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCE
Confidence 654321 11111122111112111111 11 22599999999998776652 111111111 223456
Q ss_pred ccccceeccCC-----------------------------ccccceEEEEEcccceEEEEeeccCCCCCccccccccccc
Q 043502 372 LTSITPVQQDE-----------------------------SNEKFFSLFLTTSAGAVFEYQIPKYSGTSQENQFSGGWIS 422 (949)
Q Consensus 372 l~siT~v~~d~-----------------------------~~~~~~sLF~t~S~G~Vyey~~~k~tg~~q~nq~~~~W~s 422 (949)
+.++..+..++ ...+...++++|..|+.-+..+..|.-.....+ .=+.
T Consensus 202 Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~k---Gv~~ 278 (370)
T 3l6v_A 202 VVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQ---GVIG 278 (370)
T ss_dssp EEEEEEECCC-----------------------------------CEEEEEETTSEEEEEEGGGSCCBCTTSC---CEES
T ss_pred EEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCc---ceEE
Confidence 66666654210 000225799999999999999988863211111 0011
Q ss_pred cCCC-cccccccCCCCccc-ccceEEEEeCCCceeecccCC
Q 043502 423 HLHP-PHARAARGAVGLPF-QVGRTIFPLDDGRLAELHPSG 461 (949)
Q Consensus 423 h~~P-~~ak~a~~~~g~pf-q~grviF~L~DGRLaELhl~g 461 (949)
+-.- .+-+++.. .++ ..+.++.--..|++..+....
T Consensus 279 ~k~~~~~g~lv~~---~~v~~~d~i~liT~~G~~iR~~v~~ 316 (370)
T 3l6v_A 279 IQTTERNGKLVRA---VLLGSTDEVMLISDGGTLVRTRGSE 316 (370)
T ss_dssp SCCCTTTCSEEEE---EEECTTCEEEEEETTCCEEEEEGGG
T ss_pred EEecCCCCcEEEE---EEeCCCceEEEEcCCCeEEEeeHhh
Confidence 1110 01112211 122 346788888899988876544
No 65
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=84.42 E-value=7 Score=43.40 Aligned_cols=126 Identities=19% Similarity=0.280 Sum_probs=74.9
Q ss_pred EEEeceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee-cc
Q 043502 178 FIVNQRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS-EV 256 (949)
Q Consensus 178 fivn~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t-el 256 (949)
-+++-+|...+..|.||-+.+ ++-+.+|.- .+........ .. ..-.+..|++- ++.+||+.+.+|+|.-|. +-
T Consensus 63 ~v~~g~vyv~~~~~~v~AlD~-~tG~~~W~~-~~~~~~~~~~--~~-~~~~~~~~~~~-~~~~v~v~~~dg~l~alD~~t 136 (668)
T 1kv9_A 63 LFHDGVIYTSMSWSRVIAVDA-ASGKELWRY-DPEVAKVKAR--TS-CCDAVNRGVAL-WGDKVYVGTLDGRLIALDAKT 136 (668)
T ss_dssp EEETTEEEEEEGGGEEEEEET-TTCCEEEEE-CCCCCGGGGG--GC-TTCSCCCCCEE-EBTEEEEECTTSEEEEEETTT
T ss_pred EEECCEEEEECCCCeEEEEEC-CCChhceEE-CCCCCccccc--cc-cccCCccceEE-ECCEEEEEcCCCEEEEEECCC
Confidence 357788888888899998877 467789973 3322211100 00 00112344443 566899999999999998 57
Q ss_pred CCCccccCCCCCCCceeEEeeccccCCceEEEEcc------CCceeeeccCC-chhhhhhc
Q 043502 257 EPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISS------TGDLYEYDRIS-KPSWRKHI 310 (949)
Q Consensus 257 ~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss------~GdLYeYnr~t-kpsW~kHi 310 (949)
-+.+|+....++.... .+.-.-.+-.+.||+-.+ .|.||-||..| +..|+-+.
T Consensus 137 G~~~W~~~~~~~~~~~-~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 137 GKAIWSQQTTDPAKPY-SITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp CCEEEEEECSCTTSSC-BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEeeeeccCCCCCcc-eecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 8899986543221100 011111112467777654 48899999876 56776543
No 66
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=84.33 E-value=31 Score=33.37 Aligned_cols=51 Identities=12% Similarity=-0.125 Sum_probs=29.2
Q ss_pred cceEEEEecCCCeEEEEEeCCCCeEEeecCCCCCCceeecCCCCcccCceEEEEecCCceEEEE
Q 043502 766 TGSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCLHGNQLLLIGSDGKVYLRY 829 (949)
Q Consensus 766 ~gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf~gsqLFviGSDG~LYeRy 829 (949)
.+++++.+.+|.+.+.+-.. .|.++...+ +.++.+.+|||.+...+--.||
T Consensus 259 ~~~v~~~d~~G~~~~~~~~~--------~g~~~~~~~-----~~~~~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 259 DPKGIKFDEFGNILEVIPLP--------PPFAGEHFE-----QIQEHDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp EEEEEEECTTSCEEEEEECC--------TTTTTSCCC-----EEEEETTEEEEECSSCSEEEEE
T ss_pred ccEEEEECCCCCEEEEEECC--------CCCccccce-----EEEEeCCEEEEeecCCCceEEE
Confidence 35688888888887766542 233332222 1224467888887665544444
No 67
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=84.27 E-value=58 Score=36.43 Aligned_cols=127 Identities=19% Similarity=0.299 Sum_probs=77.0
Q ss_pred EEEeceeeehhc-cCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceee--cCCc---EEEEEecCCcee
Q 043502 178 FIVNQRILALAE-AGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVS--QDGE---RVYFCTKNGLLL 251 (949)
Q Consensus 178 fivn~tilalse-ag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs--~dg~---~lff~~knG~LL 251 (949)
-+++-+|...+. .|.||-+.+.++-+.+|.- .+..+...... ...-.+..|++. +||+ |||+.+.+|+|+
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~-~~~~~~~~~~~---~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~ 134 (599)
T 1w6s_A 59 LVVDGKMYIHTSFPNNTFALGLDDPGTILWQD-KPKQNPAARAV---ACCDLVNRGLAYWPGDGKTPALILKTQLDGNVA 134 (599)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEE-CCCCCGGGGGG---CSSCSCCCCCEEECCCSSSCCEEEEECTTSEEE
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCCcEEEEE-CCCCCcccccc---ccccccccceEEEecCCcceeEEEEEcCCCEEE
Confidence 356788887787 8999999886688899964 22221110000 000023455555 5554 599999999999
Q ss_pred Eee-ccCCCccccCCCC--CCCceeEEeeccccCCceEEEEcc------CCceeeeccCC-chhhhhhcc
Q 043502 252 ELS-EVEPPRWLNHGRP--PGANVAAIADAGNVRPEVVYTISS------TGDLYEYDRIS-KPSWRKHIW 311 (949)
Q Consensus 252 e~t-el~p~rW~~hg~P--Pga~VA~I~D~~~~R~~vVftiss------~GdLYeYnr~t-kpsW~kHiw 311 (949)
-|. +--+.+|+..-.. ++..+ .-.-.+-.+.||+-++ .|.||-||..| +..|+.+.-
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~---~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 135 ALNAETGETVWKVENSDIKVGSTL---TIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEETTTCCEEEEEECCCGGGTCBC---CSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEECCCCCEEEeecCCCCCcccee---ecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 998 5788899854321 11111 1111112367776654 78999999876 557776543
No 68
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=83.33 E-value=29 Score=39.39 Aligned_cols=75 Identities=19% Similarity=0.268 Sum_probs=44.5
Q ss_pred cccCeEEEEccCceEee--ecCceeeeeecCCCCceeeecCCCc---eecCCCCCCcceEEEEecCCC-eEEEEEeCCCC
Q 043502 715 FRENIVFVVGRNGRLYQ--YNKVTELWHEHYQSQHLVLSILPGT---AMRPPSASLTGSLFMLSEDGG-LVEYHWNTWDG 788 (949)
Q Consensus 715 ~r~~~iFvvG~NGrLYE--wNg~TW~WhdHGkP~~t~ls~~pGt---AM~psk~sl~gslFm~~snG~-LyEr~Wntg~g 788 (949)
.+.+++|+.++.+.||. +.|.||.=.. +.|.... ...+. ++.| .-+..+|+...+|+ ||. .-|.|..
T Consensus 143 ~~~~~v~a~~~~~~l~~S~DgG~TW~~~~-~~~~~~~--~~~~~~~i~~~p---~~~~~~~~~~~~~g~v~~-S~DgG~t 215 (763)
T 3a0f_A 143 HWTDELWFGSRTQGLWRSTDRAQTWSRMN-QLPDSST--YGIGIISVIFDP---KNVGTAYVASHAVGGLWV-TWDGGAN 215 (763)
T ss_dssp TSTTCEEEECSSSCEEEESSTTSSCEECT-TSCCCSC--TTTCEEEEEECS---SSTTCEEEEESSTTCEEE-ESSSSSS
T ss_pred CCCCEEEEEeCCCcEEEECCCCcCccccc-cCcccCC--CccceEEEEECC---CCCCEEEEEEeCCCeEEE-ECCCCCC
Confidence 45679999999999999 7777776443 3332110 00111 2222 22346899988884 664 5565667
Q ss_pred eEEeecCCC
Q 043502 789 WNWVEHGTP 797 (949)
Q Consensus 789 W~WVdHGtP 797 (949)
|.=+. +.|
T Consensus 216 W~~~~-~~~ 223 (763)
T 3a0f_A 216 WSQVG-GQP 223 (763)
T ss_dssp CEECT-TCC
T ss_pred ccccC-CCc
Confidence 77654 444
No 69
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=83.10 E-value=14 Score=34.63 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=67.4
Q ss_pred eeecCCcEEEEEec-CCceeEee-ccCC--CccccCCCCCCCceeEEeeccccCCceEEEEccCC---ceeeeccCCchh
Q 043502 233 VVSQDGERVYFCTK-NGLLLELS-EVEP--PRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTG---DLYEYDRISKPS 305 (949)
Q Consensus 233 vvs~dg~~lff~~k-nG~LLe~t-el~p--~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~G---dLYeYnr~tkps 305 (949)
.+|.||++||+++. +++|..+. +-.+ .+-...+..|-..+++-.| -+.+|+....| .++-||..+...
T Consensus 46 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d-----g~~l~~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 46 AITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD-----DQFAVTVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp EECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT-----SSEEEECCCSSSSCEEEEEETTTTEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCC-----CCEEEEecCCCCcccEEEEECCCCCe
Confidence 47889998998887 56665554 2222 1222222222221332111 23566444342 788888766511
Q ss_pred hhhhccccccccccccccCcccccccccCCce-eeEEEEecCCcEEEEEeeccceeEEEcCCCCCCcccccceeccCCcc
Q 043502 306 WRKHIWSKGTAANASLIPSMACTLHGLIGDHS-TSLFLLTKGGNLVERRIQQRKWKWIIHGSPEDTHLTSITPVQQDESN 384 (949)
Q Consensus 306 W~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S-~SLFlltk~G~LVErr~~qrkWkWi~HGtP~~~~l~siT~v~~d~~~ 384 (949)
.+.+............|.-...+..-.++.. +.+|-+..+|.+++.. . +-+.+|... ..+ .+.+
T Consensus 121 -~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~----~~~~~~~~~----~~~--~~sp--- 185 (331)
T 3u4y_A 121 -ISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-Q----EFISGGTRP----FNI--TFTP--- 185 (331)
T ss_dssp -EEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-E----EEECSSSSE----EEE--EECT---
T ss_pred -EEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-C----ccccCCCCc----cce--EECC---
Confidence 1111111111111122211111222223344 5556665555555443 1 112222221 222 2222
Q ss_pred ccceEEEEEcc-cceEEEEeec
Q 043502 385 EKFFSLFLTTS-AGAVFEYQIP 405 (949)
Q Consensus 385 ~~~~sLF~t~S-~G~Vyey~~~ 405 (949)
++..||++++ ++.|+.|.+.
T Consensus 186 -dg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 186 -DGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp -TSSEEEEEETTTTEEEEEECS
T ss_pred -CCCEEEEEeCCCCeEEEEECC
Confidence 3456888775 7889888873
No 70
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=83.04 E-value=31 Score=32.35 Aligned_cols=72 Identities=17% Similarity=0.222 Sum_probs=43.2
Q ss_pred eeEeecceeecCCcEEEEEe--cCCceeEee-ccCCCcccc--CCCCCCCceeEEeeccccCCceEEEEccCCceeeecc
Q 043502 226 VIQIKSGVVSQDGERVYFCT--KNGLLLELS-EVEPPRWLN--HGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDR 300 (949)
Q Consensus 226 ~~~ik~gvvs~dg~~lff~~--knG~LLe~t-el~p~rW~~--hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr 300 (949)
+.++..=.+|.||++||+++ .++++..+. +-.+..+.- ++..|. .+++=.| -+.+|+.+.+|.++-||.
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~s~d-----g~~l~~~~~~~~i~~~d~ 213 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST-GLALDSE-----GKRLYTTNADGELITIDT 213 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC-CCEEETT-----TTEEEEECTTSEEEEEET
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc-eEEECCC-----CCEEEEEcCCCeEEEEEC
Confidence 34455667899999999998 367666665 222222221 232221 1222112 246888999999999997
Q ss_pred CCc
Q 043502 301 ISK 303 (949)
Q Consensus 301 ~tk 303 (949)
.+.
T Consensus 214 ~~~ 216 (353)
T 3vgz_A 214 ADN 216 (353)
T ss_dssp TTT
T ss_pred CCC
Confidence 765
No 71
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=82.63 E-value=27 Score=39.90 Aligned_cols=159 Identities=16% Similarity=0.188 Sum_probs=87.1
Q ss_pred cCcEEEEecCCeEeEEEEeceeeeeecCCCCC------Ccce-EEeecccccccCeEEEEcc--C----ceEee--ecCc
Q 043502 671 EDALFFVSKNGRLLQFTVALRKFKWKDCRHPL------DTKV-ACIVDQELFRENIVFVVGR--N----GRLYQ--YNKV 735 (949)
Q Consensus 671 ~dklF~vt~~GrLlq~tva~rkwkW~dhg~PP------gTkI-ata~d~~~~r~~~iFvvG~--N----GrLYE--wNg~ 735 (949)
.+-+|+.++.|.||.-+=.++ +|.....++ +..| +.++|+ -+.+++|+.+. + |.||. +.|.
T Consensus 27 ~~~~~a~~~~ggv~rS~DgG~--tW~~~~~~~~~~~~~~~~i~~ia~dp--~~~~~i~~~~g~~~~~~~~~v~~S~DgG~ 102 (789)
T 1sqj_A 27 KDLLYARTDIGGAYRWDAGTS--KWIPLNDFIEAQDMNIMGTESIALDP--NNPDRLYLAQGRYVGDEWAAFYVSEDRGQ 102 (789)
T ss_dssp TTCEEEEESSSCEEEEETTTT--EEEESCTTCCGGGGGGCSEEEEEEET--TEEEEEEEEECSCTTSSCCEEEEESSTTS
T ss_pred CCEEEEEecCCCEEEecCCCC--CeeECccCCCcccccCCceeEEEECC--CCCCEEEEEeCccCCCcccEEEEECCCCC
Confidence 456788888887775443443 344443332 2334 334444 34467888653 3 88998 8888
Q ss_pred eeeeeecCCCCceeee---cCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecCCC-----CCCceeec-C
Q 043502 736 TELWHEHYQSQHLVLS---ILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHGTP-----GKGVTLVG-S 806 (949)
Q Consensus 736 TW~WhdHGkP~~t~ls---~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHGtP-----~~gvtvv~-s 806 (949)
||.-..-..+...... .....++.|. .+..+|+.+..++|| |.-|.|..|.=+.- .| ..++..+. .
T Consensus 103 TW~~~~~~~~~~~~~~~~~~~~~iav~p~---~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~-~~~~~~~~~~~~~i~~~ 177 (789)
T 1sqj_A 103 SFTIYESPFPMGANDMGRNNGERLAVNPF---NSNEVWMGTRTEGIW-KSSDRAKTWTNVTS-IPDAFTNGIGYTSVIFD 177 (789)
T ss_dssp EEEEEECSSCCCTTSTTTTSCCCEEEETT---EEEEEEEECSSSCEE-EESSTTSSCEEETT-SCCCCSTTTCEEEEEEC
T ss_pred cceeccCCcccCccCCCccceeEEEEcCC---CCCEEEEEeccCCEE-EECCCCcccCCCcc-CccccCCCCCeEEEEEC
Confidence 8887764322110000 0112344432 246889988788888 45565667885542 22 11222111 1
Q ss_pred CCCcccCceEEEEecC-CceEEEEEe-CCcceeeecCCC
Q 043502 807 PGPCLHGNQLLLIGSD-GKVYLRYMD-QMTWRWKNCGFP 843 (949)
Q Consensus 807 pG~sf~gsqLFviGSD-G~LYeRywd-g~tWtW~NhG~P 843 (949)
|. ..+.||+...+ +.+|+ =.| +.+|+=+. +.|
T Consensus 178 p~---~~~~~~~~~~~~~~v~~-S~DgG~TW~~~~-~~~ 211 (789)
T 1sqj_A 178 PE---RNGTIYASATAPQGMYV-THDGGVSWEPVA-GQP 211 (789)
T ss_dssp TT---STTCEEEEESSTTCEEE-ESSTTSSCEECT-TCC
T ss_pred CC---CCCEEEEEEcCCCeEEE-EcCCCcCcccCC-CCc
Confidence 11 23578888777 77775 445 55887665 555
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=82.50 E-value=29 Score=31.67 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=66.2
Q ss_pred eeEEEccCCCccccCCeEEEEEEeceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecC
Q 043502 158 VQWVIAPHDLPISAGPAISVFIVNQRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQD 237 (949)
Q Consensus 158 ~~wviaphdlp~s~g~ai~vfivn~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~d 237 (949)
+.-.+..|+-+|. +++. --+..+++-++.|.++-..+... +.+-+-..+ .. .|.+=..+.|
T Consensus 10 ~~~~l~~h~~~v~---~~~~-~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~~~~-----------~~---~v~~~~~~~~ 70 (313)
T 3odt_A 10 LSATLKGHDQDVR---DVVA-VDDSKVASVSRDGTVRLWSKDDQ-WLGTVVYTG-----------QG---FLNSVCYDSE 70 (313)
T ss_dssp EEEEECCCSSCEE---EEEE-EETTEEEEEETTSEEEEEEESSS-EEEEEEEEC-----------SS---CEEEEEEETT
T ss_pred HHHHhhCCCCCcE---EEEe-cCCCEEEEEEcCCcEEEEECCCC-EEEEEeecC-----------Cc---cEEEEEECCC
Confidence 3445666766554 2332 34456777788898776666332 111111111 01 1333356889
Q ss_pred CcEEEEEecCCceeEee--ccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeec
Q 043502 238 GERVYFCTKNGLLLELS--EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYD 299 (949)
Q Consensus 238 g~~lff~~knG~LLe~t--el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYn 299 (949)
|..|+.+..+|.+.-+. .....+-...-......|.+|.= .++.+++.+.+|.++-||
T Consensus 71 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 71 KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF----QDGVVISGSWDKTAKVWK 130 (313)
T ss_dssp TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEE
T ss_pred CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe----cCCEEEEEeCCCCEEEEc
Confidence 99999999999875433 22111111111112234444433 467899999999999999
No 73
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=82.47 E-value=6 Score=44.48 Aligned_cols=110 Identities=14% Similarity=0.221 Sum_probs=61.9
Q ss_pred ccccCeEEEEccCceEee--ecCceeeeeec---CCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC
Q 043502 714 LFRENIVFVVGRNGRLYQ--YNKVTELWHEH---YQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG 788 (949)
Q Consensus 714 ~~r~~~iFvvG~NGrLYE--wNg~TW~WhdH---GkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g 788 (949)
..+.+++|+++ +|.||. +.|.+ |... +.|.. -..|... ....+.+|+.+..|.||. .=+.|..
T Consensus 574 ~~~~~~~~a~~-~g~v~~S~DgG~t--W~~~~~~~~p~~-------~~~i~~~-~~~~g~l~~~~~~g~l~~-S~D~G~t 641 (737)
T 2cn3_A 574 RVNGKKFYAFY-NGKFYISTDGGLT--FTDTKAPQLPKS-------VNKIKAV-PGKEGHVWLAAREGGLWR-STDGGYT 641 (737)
T ss_dssp SSCTTCEEEEE-TTEEEEESSTTSB--CEECCCSSCCSC-------CSEEEEE-TTEEEEEEEECBTTCEEE-ESSTTSS
T ss_pred ecCCCEEEEec-CCEEEEECCCCcC--cccccCCCCCCc-------cceEEEE-eCCCCEEEEEeCCCcEEE-EeCCCcc
Confidence 45778899888 999999 55655 5443 34431 1223321 123568999999888885 4455567
Q ss_pred eEEeecCCCCCC--ceeec-CCCCcccCceEEEEecCCc---eEEEEEeCCcceeee
Q 043502 789 WNWVEHGTPGKG--VTLVG-SPGPCLHGNQLLLIGSDGK---VYLRYMDQMTWRWKN 839 (949)
Q Consensus 789 W~WVdHGtP~~g--vtvv~-spG~sf~gsqLFviGSDG~---LYeRywdg~tWtW~N 839 (949)
|.=+. .|..+ +.++. .++ -.++.||+.|..|. +|+-.=.+.+|+=++
T Consensus 642 W~~~~--~~~~~~~~~~~~~~~~--~~~~~l~~~g~~g~~~gl~~S~D~G~tW~~~~ 694 (737)
T 2cn3_A 642 FEKLS--NVDTAHVVGFGKAAPG--QDYMAIYITGKIDNVLGFFRSDDAGKTWVRIN 694 (737)
T ss_dssp CEECT--TCSEEEEEEEECCCTT--CSSCEEEEEEEETTEEEEEEESSTTSSCEECS
T ss_pred cEECc--CCCccceEEEeecCCC--CCCcEEEEEEecCCcceEEEeCCCCCCCEecc
Confidence 77553 34322 11211 121 11247999876666 554432255776544
No 74
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=82.46 E-value=26 Score=35.87 Aligned_cols=142 Identities=13% Similarity=0.144 Sum_probs=84.3
Q ss_pred ceeEEEecccCchheeeccceeEEEccCCCccc----------------cC-CeEEEEEE-----eceeeehhccCceEE
Q 043502 138 ETSIWVTGVSGSVYERFWNGVQWVIAPHDLPIS----------------AG-PAISVFIV-----NQRILALAEAGVLYQ 195 (949)
Q Consensus 138 etsiwvtgesgsiyerfwng~~wviaphdlp~s----------------~g-~ai~vfiv-----n~tilalseag~lyq 195 (949)
...|-+.-..|-+|- +.-||||.. .| .-++++.+ ++.+|-+++.|..+.
T Consensus 58 ~~~ll~~T~~G~~~~---------~~~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr 128 (312)
T 1suu_A 58 HDYLFMISNEGKLYL---------INAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIAR 128 (312)
T ss_dssp TCEEEEEETTSEEEE---------EEGGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEE
T ss_pred CCEEEEEECCCeEEE---------EEHHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEE
Confidence 445666677777763 567888765 12 23456666 466999999999999
Q ss_pred EecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccCCCccccCC-----CCC
Q 043502 196 MQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVEPPRWLNHG-----RPP 268 (949)
Q Consensus 196 mql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~p~rW~~hg-----~PP 268 (949)
+.+.|-...- .-...-+.+++ ....+... ++ .+...|+++|++|.++.|. ++++..=.--| -++
T Consensus 129 ~~l~~~~~~r----~~G~~~i~L~~--~d~lv~~~--~~-~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~ 199 (312)
T 1suu_A 129 FESTDFKAVK----SRGVIVIKLND--KDFVTSAE--IV-FKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE 199 (312)
T ss_dssp EEGGGGCC--------CEECBCCCT--TCCEEEEE--EE-CTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT
T ss_pred EEHHHhhccC----CCcEEEEecCC--CCEEEEEE--Ee-CCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC
Confidence 9998743220 11111122222 22333332 23 4566899999999999998 46554332222 345
Q ss_pred CCceeEEeeccccCCceEEEEccCCceeeec
Q 043502 269 GANVAAIADAGNVRPEVVYTISSTGDLYEYD 299 (949)
Q Consensus 269 ga~VA~I~D~~~~R~~vVftiss~GdLYeYn 299 (949)
|..|.+++=.+ -.+.|++++.+|.+..++
T Consensus 200 ~d~vv~~~~v~--~~~~l~~vt~~G~~kr~~ 228 (312)
T 1suu_A 200 GDLFVKVLSVK--ENPYLLIVSENGYGKRLN 228 (312)
T ss_dssp TCCEEEEEECT--TCSEEEEEETTSEEEEEE
T ss_pred CCEEEEEEEEC--CCCeEEEEECCCceEEEE
Confidence 77765543211 124588999999877664
No 75
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=81.51 E-value=21 Score=37.08 Aligned_cols=199 Identities=14% Similarity=0.180 Sum_probs=113.9
Q ss_pred eeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccCCCc
Q 043502 183 RILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVEPPR 260 (949)
Q Consensus 183 tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~p~r 260 (949)
.++.||..|.+-.+.+.+-.. ++....+.++.-..+. =++......|+|.|.+|+++.|. +|...+
T Consensus 7 ~~v~lT~~G~IKr~~~~~~~~---------~~~~~~~lke~D~l~~---~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~ 74 (323)
T 1wp5_A 7 VIVTVTKDGYVKRTSLRSYAA---------SNGQDFAMKDTDRLLA---MLEMNTKDVLLLFTNKGNYLYCPVHELPDIR 74 (323)
T ss_dssp EEEEEETTCEEEEEEHHHHHH---------TTTCCCCCCTTCCEEE---EEEEETTSEEEEEETTSEEEEEEGGGSCBCC
T ss_pred EEEEEeCCCEEEEeEHHHhhh---------cCccccccCCCCEEEE---EEEECCCCEEEEEECCCEEEEEEHHHCcCCC
Confidence 466788889888886654311 0111112222222222 23455667899999999999998 799999
Q ss_pred cccCCC--------CCCCceeEEeeccccC-CceEEEEccCCce-----eeeccCCchhhhhhccccccccccccccCcc
Q 043502 261 WLNHGR--------PPGANVAAIADAGNVR-PEVVYTISSTGDL-----YEYDRISKPSWRKHIWSKGTAANASLIPSMA 326 (949)
Q Consensus 261 W~~hg~--------PPga~VA~I~D~~~~R-~~vVftiss~GdL-----YeYnr~tkpsW~kHiws~~l~~~~sl~~s~g 326 (949)
|+..|. .+|-+|.++.-...|- ...++.++++|-. -+|..... ++=+..=.+.+.-.|....
T Consensus 75 r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r---~~G~~ai~l~e~d~lv~~~- 150 (323)
T 1wp5_A 75 WKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY---SKPLTGINLKNDDQVVDVH- 150 (323)
T ss_dssp TTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC---SSCEECSCCCTTCCEEEEE-
T ss_pred CCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc---cCceEEEEeCCCCEEEEEE-
Confidence 998887 3777877665443332 2458888999964 34443220 1111111121111221111
Q ss_pred cccccccCCceeeEEEEecCCcEEEEEeec-cceeEEEcC-----CCCCCcccccceeccCCccccceEEEEEcccceEE
Q 043502 327 CTLHGLIGDHSTSLFLLTKGGNLVERRIQQ-RKWKWIIHG-----SPEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVF 400 (949)
Q Consensus 327 ~t~~gl~g~~S~SLFlltk~G~LVErr~~q-rkWkWi~HG-----tP~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vy 400 (949)
+. .+ .--|+|+|+.|.++-...++ +--..---| -+.++.+.++..+.. + + ..|+++|..|+..
T Consensus 151 --~~--~~--~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~-~--~--~~ll~vt~~G~gK 219 (323)
T 1wp5_A 151 --LT--DG--MNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITS-K--D--ESIVVATQRGAVK 219 (323)
T ss_dssp --EE--CS--CSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECC-T--T--CEEEEEETTSEEE
T ss_pred --Ee--CC--CCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcC-C--C--cEEEEEECCCceE
Confidence 11 11 22599999999998766652 222111111 124456666665532 1 1 2599999999999
Q ss_pred EEeeccCC
Q 043502 401 EYQIPKYS 408 (949)
Q Consensus 401 ey~~~k~t 408 (949)
+..+.++.
T Consensus 220 r~~~~e~~ 227 (323)
T 1wp5_A 220 KMKLTEFE 227 (323)
T ss_dssp EEEGGGSC
T ss_pred EEEHHHcc
Confidence 99998863
No 76
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=80.29 E-value=42 Score=32.06 Aligned_cols=198 Identities=16% Similarity=0.243 Sum_probs=99.4
Q ss_pred CEEEEEecCCCCCccccc-cccccceEEEeccC-c--E-EEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeec
Q 043502 595 SVWLWLRHDHSTPMRGVL-GNYNGSLYMVDLYG-S--L-LIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVT 669 (949)
Q Consensus 595 ~~WlWl~H~h~T~m~g~~-g~~ngsLf~vd~~G-s--L-~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt 669 (949)
+.|.=+. ..|.+..+.. ..++++||+..-.. + + -+-..+-..-.|.....|+..+. + .+++ .
T Consensus 40 ~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~------~~~~---~ 106 (302)
T 2xn4_A 40 ERWHQVA-ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRS---T------LGAA---V 106 (302)
T ss_dssp TEEEEEC-CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB---S------CEEE---E
T ss_pred CcEeEcc-cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcccc---c------eEEE---E
Confidence 3444332 3445544433 33788898875321 1 0 01123445567888877766442 1 2222 3
Q ss_pred ccCcEEEEec-CC-eEeE--EEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEcc-Cc-------eEeeecCcee
Q 043502 670 AEDALFFVSK-NG-RLLQ--FTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR-NG-------RLYQYNKVTE 737 (949)
Q Consensus 670 ~~dklF~vt~-~G-rLlq--~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~-NG-------rLYEwNg~TW 737 (949)
.++++|+..- ++ ..+. +......-+|......|...-..+ ...+ +++||+.|. ++ .++.|+-.+.
T Consensus 107 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~--~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 107 LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVG--VGVV-GGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCE--EEEE-TTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCce--EEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 5888888752 21 1122 122444556666655444333222 2234 457777663 22 3677998888
Q ss_pred eeeecCCCCceeeecCCCceecCCCCCCcceEEEEecC------CCeEEEEEeCCCCeEEeecCCCCCCceeecCCCCcc
Q 043502 738 LWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSED------GGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCL 811 (949)
Q Consensus 738 ~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~sn------G~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf 811 (949)
.|..-...+... .+.++.. +.+++|+.+.. ..++. |=-....|.-+ ..+..+- ...+.+.
T Consensus 184 ~W~~~~~~p~~r----~~~~~~~----~~~~iyv~GG~~~~~~~~~~~~-yd~~~~~W~~~--~~~~~~r---~~~~~~~ 249 (302)
T 2xn4_A 184 EWTYIAEMSTRR----SGAGVGV----LNNLLYAVGGHDGPLVRKSVEV-YDPTTNAWRQV--ADMNMCR---RNAGVCA 249 (302)
T ss_dssp EEEEECCCSSCC----BSCEEEE----ETTEEEEECCBSSSSBCCCEEE-EETTTTEEEEE--CCCSSCC---BSCEEEE
T ss_pred cEEECCCCcccc----ccccEEE----ECCEEEEECCCCCCcccceEEE-EeCCCCCEeeC--CCCCCcc---ccCeEEE
Confidence 998876444322 1222221 24678888642 23443 32223345544 3222111 1223345
Q ss_pred cCceEEEEecC
Q 043502 812 HGNQLLLIGSD 822 (949)
Q Consensus 812 ~gsqLFviGSD 822 (949)
.+++||++|+.
T Consensus 250 ~~~~i~v~GG~ 260 (302)
T 2xn4_A 250 VNGLLYVVGGD 260 (302)
T ss_dssp ETTEEEEECCB
T ss_pred ECCEEEEECCc
Confidence 68899999873
No 77
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=80.06 E-value=43 Score=32.01 Aligned_cols=193 Identities=19% Similarity=0.314 Sum_probs=99.3
Q ss_pred CceEEEEee--C----CeeEEEEecCCEEEEEecCCCCCcccccc-ccccceEEEecc-Cc--E-EEEEecCCCceeeec
Q 043502 575 SRSFFLITD--G----GFTFEYLYAESVWLWLRHDHSTPMRGVLG-NYNGSLYMVDLY-GS--L-LIRERSSNELAWINC 643 (949)
Q Consensus 575 ~~s~fliTd--~----G~~fE~~~~~~~WlWl~H~h~T~m~g~~g-~~ngsLf~vd~~-Gs--L-~~R~~~g~~~~W~n~ 643 (949)
+.++|++-- + ..++.|=-..+.|.=+. ..|.+..+... .++++||++.-. +. + -+-..+-..-.|...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA-NMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCC-CCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 567887621 1 12333334566777664 34455444333 389999998642 21 1 112234455678887
Q ss_pred cCCCCCceeecCCCCCCCCCcceeecccCcEEEEec--------CCeEeEEEEeceeeeeecCCCCCCcceEEeeccccc
Q 043502 644 TAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSK--------NGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELF 715 (949)
Q Consensus 644 t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~--------~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~ 715 (949)
..|+..+. +.++ +..++++|+..- ...++.+-.. .-+|......|-..-..+ ..++
T Consensus 140 ~~~p~~r~-----------~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~--~~~~ 203 (302)
T 2xn4_A 140 APMNTRRS-----------SVGV-GVVGGLLYAVGGYDVASRQCLSTVECYNAT--TNEWTYIAEMSTRRSGAG--VGVL 203 (302)
T ss_dssp CCCSSCCB-----------SCEE-EEETTEEEEECCEETTTTEECCCEEEEETT--TTEEEEECCCSSCCBSCE--EEEE
T ss_pred CCCCCccc-----------CceE-EEECCEEEEEeCCCCCCCccccEEEEEeCC--CCcEEECCCCcccccccc--EEEE
Confidence 77765432 1222 336889998742 1234444333 445555544443332211 2344
Q ss_pred ccCeEEEEc-cCc-----eEeeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecC-CC----eEEEEEe
Q 043502 716 RENIVFVVG-RNG-----RLYQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSED-GG----LVEYHWN 784 (949)
Q Consensus 716 r~~~iFvvG-~NG-----rLYEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~sn-G~----LyEr~Wn 784 (949)
+ ++||+.| .++ .++.|+-.+..|..-...+.... +.++.. +.+++|+.+.. +. -.|.|=-
T Consensus 204 ~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~----~~~~~~----~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 204 N-NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR----NAGVCA----VNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp T-TEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB----SCEEEE----ETTEEEEECCBCSSSBCCCEEEEET
T ss_pred C-CEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc----cCeEEE----ECCEEEEECCcCCCcccccEEEEcC
Confidence 4 4666665 444 47779988889988764443221 222221 24678888653 21 1344433
Q ss_pred CCCCeEEee
Q 043502 785 TWDGWNWVE 793 (949)
Q Consensus 785 tg~gW~WVd 793 (949)
....|.-+.
T Consensus 275 ~~~~W~~~~ 283 (302)
T 2xn4_A 275 TTDKWTVVS 283 (302)
T ss_dssp TTTEEEECS
T ss_pred CCCeEEECC
Confidence 344566554
No 78
>2bt9_A Lectin; sugar recognition, beta-propeller; HET: MFU; 0.94A {Ralstonia solanacearum} PDB: 2bs5_A* 2bs6_A* 3zw0_A* 3zw1_B* 3zw2_A* 3zwe_A* 3zzv_A* 3zw0_B* 3zw1_A*
Probab=80.01 E-value=2.3 Score=38.45 Aligned_cols=65 Identities=14% Similarity=0.259 Sum_probs=47.4
Q ss_pred cceEEEEecCCCeEEEEEeCCCCeE---EeecCCCCCCceeecCCCCcccCceEEEEecCCceEEEEEeCCcce
Q 043502 766 TGSLFMLSEDGGLVEYHWNTWDGWN---WVEHGTPGKGVTLVGSPGPCLHGNQLLLIGSDGKVYLRYMDQMTWR 836 (949)
Q Consensus 766 ~gslFm~~snG~LyEr~Wntg~gW~---WVdHGtP~~gvtvv~spG~sf~gsqLFviGSDG~LYeRywdg~tWt 836 (949)
..|+|. +.|++|.|+-|+ +.+|. -.-.|+|. ..+.-+|++-..-+||- .++..+.|--|++..|+
T Consensus 15 ~IRVYy-~~~~~i~E~~~d-g~~W~~g~~a~P~t~I---AA~sw~g~~~~~IRVY~-~~~n~i~E~~w~~~~W~ 82 (90)
T 2bt9_A 15 SIRVYT-ANNGKITERCWD-GKGWYTGAFNEPGDNV---SVTSWLVGSAIHIRVYA-STGTTTTEWCWDGNGWT 82 (90)
T ss_dssp EEEEEE-EETTEEEEEEES-SSCEEEEEEEEECSEE---EEEEEEETTEEEEEEEE-EETTEEEEEEESSSCEE
T ss_pred eEEEEE-cCCCcEEEEEEc-CCccccCcccCCCCcE---EEEEccCCCcEEEEEEE-CCCCcEEEEEEcCCcee
Confidence 568999 999999999999 77765 33344443 33333555434568999 88899999999976664
No 79
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=79.97 E-value=47 Score=32.49 Aligned_cols=99 Identities=11% Similarity=0.204 Sum_probs=53.1
Q ss_pred ceEEEEecCceEEEEe-eCCeeEEEEecC---CEEEEEecCCC-CCcccccc-ccccceEEEeccCc----------EEE
Q 043502 567 FRLRVMHGSRSFFLIT-DGGFTFEYLYAE---SVWLWLRHDHS-TPMRGVLG-NYNGSLYMVDLYGS----------LLI 630 (949)
Q Consensus 567 f~~rvmh~~~s~fliT-d~G~~fE~~~~~---~~WlWl~H~h~-T~m~g~~g-~~ngsLf~vd~~Gs----------L~~ 630 (949)
.+.-++. +.++|++- .++..++.|... +.|.=+.- -| .|..+... .++++||+..-.+. -..
T Consensus 12 ~~~~~~~-~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~ 89 (357)
T 2uvk_A 12 SGTGAID-NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVH 89 (357)
T ss_dssp SCEEEEE-TTEEEEECGGGTTCEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEE
T ss_pred ceEEEEE-CCEEEEEeCcCCCeEEEEccccCCCCeeECCC-CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEE
Confidence 4555666 46777763 122334455543 67775543 34 45444433 38999999864411 112
Q ss_pred EEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEec
Q 043502 631 RERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSK 679 (949)
Q Consensus 631 R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~ 679 (949)
+ .+-..-.|.....|+|-.+ -+.++ +..++++|+..-
T Consensus 90 ~-yd~~~~~W~~~~~~~p~~r----------~~~~~-~~~~~~iyv~GG 126 (357)
T 2uvk_A 90 K-YNPKTNSWVKLMSHAPMGM----------AGHVT-FVHNGKAYVTGG 126 (357)
T ss_dssp E-EETTTTEEEECSCCCSSCC----------SSEEE-EEETTEEEEEEC
T ss_pred E-EeCCCCcEEECCCCCCccc----------ccceE-EEECCEEEEEeC
Confidence 2 2344556877776652211 12333 237889988763
No 80
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=79.93 E-value=51 Score=32.84 Aligned_cols=218 Identities=14% Similarity=0.127 Sum_probs=113.8
Q ss_pred ecceeEEEecccCchheeecc----ceeEEEccCCCccccCCeEEEEEEeceeeehhccCceEEEecCCCCcceEEEeec
Q 043502 136 MSETSIWVTGVSGSVYERFWN----GVQWVIAPHDLPISAGPAISVFIVNQRILALAEAGVLYQMQLGDNSQPIWVEFIP 211 (949)
Q Consensus 136 msetsiwvtgesgsiyerfwn----g~~wviaphdlp~s~g~ai~vfivn~tilalseag~lyqmql~e~sqpiw~ef~~ 211 (949)
.++.-+...+..|.|+ .|+ -....+..|+-+| .++-+-+..|++-+..|.++-..+.. .+++.+--.+
T Consensus 167 ~~~~~l~s~~~dg~i~--vwd~~~~~~~~~~~~h~~~v-----~~~~~~~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~~ 238 (445)
T 2ovr_B 167 MRDNIIISGSTDRTLK--VWNAETGECIHTLYGHTSTV-----RCMHLHEKRVVSGSRDATLRVWDIET-GQCLHVLMGH 238 (445)
T ss_dssp EETTEEEEEETTSCEE--EEETTTTEEEEEECCCSSCE-----EEEEEETTEEEEEETTSEEEEEESSS-CCEEEEEECC
T ss_pred ecCCEEEEEeCCCeEE--EEECCcCcEEEEECCCCCcE-----EEEEecCCEEEEEeCCCEEEEEECCC-CcEEEEEcCC
Confidence 3456677777788774 565 2345555666554 34555677788888999888877654 2333321110
Q ss_pred cccccccccccccceeEeecceeecCCcEEEEEecCCceeEee-ccCCCccccCCCCCCCceeEEeeccccCCceEEEEc
Q 043502 212 AIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS-EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTIS 290 (949)
Q Consensus 212 ~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t-el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftis 290 (949)
...+. -++.||..|+.+..+|.+.-+. +-......-.++ ...|.++.= -.+.+++.+
T Consensus 239 ------------~~~v~----~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~----~~~~l~~~~ 296 (445)
T 2ovr_B 239 ------------VAAVR----CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH--TNRVYSLQF----DGIHVVSGS 296 (445)
T ss_dssp ------------SSCEE----EEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCC--SSCEEEEEE----CSSEEEEEE
T ss_pred ------------cccEE----EEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCC--CCceEEEEE----CCCEEEEEe
Confidence 01111 1233788888888888765554 111111111111 123444432 457899999
Q ss_pred cCCceeeeccCCchhhhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccceeEEEcCC-CCC
Q 043502 291 STGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKWKWIIHGS-PED 369 (949)
Q Consensus 291 s~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkWkWi~HGt-P~~ 369 (949)
.+|.++-||-.+...-+. ...|.. ...++ ...+. -|+.-+.||.+.-+.+...+-.....+. .+.
T Consensus 297 ~d~~i~i~d~~~~~~~~~--~~~~~~----~v~~~-----~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 362 (445)
T 2ovr_B 297 LDTSIRVWDVETGNCIHT--LTGHQS----LTSGM-----ELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 362 (445)
T ss_dssp TTSCEEEEETTTCCEEEE--ECCCCS----CEEEE-----EEETT---EEEEEETTSCEEEEETTTCCEEEEECSTTSCS
T ss_pred CCCeEEEEECCCCCEEEE--EcCCcc----cEEEE-----EEeCC---EEEEEeCCCeEEEEECCCCcEEEEEccCCCCC
Confidence 999999999876521110 111111 11111 11221 3444566777776666533322333221 122
Q ss_pred CcccccceeccCCccccceEEEEEcccceEEEEeec
Q 043502 370 THLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQIP 405 (949)
Q Consensus 370 ~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~~~ 405 (949)
..++++.. + +..|+..+.||.|+.|.+.
T Consensus 363 ~~v~~~~~---~-----~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 363 SAVTCLQF---N-----KNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp SCEEEEEE---C-----SSEEEEEETTSEEEEEETT
T ss_pred CCEEEEEE---C-----CCEEEEEeCCCeEEEEECC
Confidence 23344433 1 2446666679999999883
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=79.20 E-value=54 Score=32.67 Aligned_cols=214 Identities=13% Similarity=0.038 Sum_probs=106.4
Q ss_pred ecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCcee
Q 043502 573 HGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQV 652 (949)
Q Consensus 573 h~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V 652 (949)
..++.++...+||.+.=+=...+.-+..-.+|..++.... .-+..|+....||++.+=......... .
T Consensus 127 ~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~-----------~ 194 (445)
T 2ovr_B 127 FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ-MRDNIIISGSTDRTLKVWNAETGECIH-----------T 194 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEE-EETTEEEEEETTSCEEEEETTTTEEEE-----------E
T ss_pred EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEE-ecCCEEEEEeCCCeEEEEECCcCcEEE-----------E
Confidence 3467777788888775433334444444455554443222 224456677778877664433222211 1
Q ss_pred ecCCCCCCCCCcceeec-ccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEccCceEee
Q 043502 653 IGGPPWDGITGKAMKVT-AEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQ 731 (949)
Q Consensus 653 ~~G~pwdgipG~~~~vt-~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYE 731 (949)
+.| -.+....+. .++.++.++.||.+.-+-....+....-.+.. ..|..+ -+.++.+++.+.||.++-
T Consensus 195 ~~~-----h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~--~~v~~~----~~~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 195 LYG-----HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHV--AAVRCV----QYDGRRVVSGAYDFMVKV 263 (445)
T ss_dssp ECC-----CSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCS--SCEEEE----EECSSCEEEEETTSCEEE
T ss_pred ECC-----CCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCc--ccEEEE----EECCCEEEEEcCCCEEEE
Confidence 111 111111111 34567778889988776654444333322221 123222 226778899999999888
Q ss_pred ecCce--eeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC---eEEeecCCCCCCceeecC
Q 043502 732 YNKVT--ELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG---WNWVEHGTPGKGVTLVGS 806 (949)
Q Consensus 732 wNg~T--W~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g---W~WVdHGtP~~gvtvv~s 806 (949)
|+-.+ ....-.+.+. .+ +++.. -+..++..+.||.+. .|+..++ .....|..+. .-
T Consensus 264 wd~~~~~~~~~~~~~~~-~v------~~~~~----~~~~l~~~~~d~~i~--i~d~~~~~~~~~~~~~~~~v---~~--- 324 (445)
T 2ovr_B 264 WDPETETCLHTLQGHTN-RV------YSLQF----DGIHVVSGSLDTSIR--VWDVETGNCIHTLTGHQSLT---SG--- 324 (445)
T ss_dssp EEGGGTEEEEEECCCSS-CE------EEEEE----CSSEEEEEETTSCEE--EEETTTCCEEEEECCCCSCE---EE---
T ss_pred EECCCCcEeEEecCCCC-ce------EEEEE----CCCEEEEEeCCCeEE--EEECCCCCEEEEEcCCcccE---EE---
Confidence 76332 2222222111 11 11221 123466677788774 5664332 2233343332 11
Q ss_pred CCCcccCceEEEEecCCceEEEEEeC
Q 043502 807 PGPCLHGNQLLLIGSDGKVYLRYMDQ 832 (949)
Q Consensus 807 pG~sf~gsqLFviGSDG~LYeRywdg 832 (949)
-++.++.|+..+.||.++ .|+-
T Consensus 325 --~~~~~~~l~~~~~dg~i~--vwd~ 346 (445)
T 2ovr_B 325 --MELKDNILVSGNADSTVK--IWDI 346 (445)
T ss_dssp --EEEETTEEEEEETTSCEE--EEET
T ss_pred --EEEeCCEEEEEeCCCeEE--EEEC
Confidence 123456777777788764 5763
No 82
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=79.09 E-value=48 Score=32.07 Aligned_cols=211 Identities=12% Similarity=0.107 Sum_probs=105.9
Q ss_pred CCeeEEEEe-cCCEEEEEecCCCCCccccc-cccccceEEEecc-----Cc---EE--EEEecCCCceeeeccCCCCCce
Q 043502 584 GGFTFEYLY-AESVWLWLRHDHSTPMRGVL-GNYNGSLYMVDLY-----GS---LL--IRERSSNELAWINCTAMRKGRQ 651 (949)
Q Consensus 584 ~G~~fE~~~-~~~~WlWl~H~h~T~m~g~~-g~~ngsLf~vd~~-----Gs---L~--~R~~~g~~~~W~n~t~mr~G~~ 651 (949)
+|...+.|. ..+.|.=..-..|.|..+.. ..+++.||+..-. +. +. +-..+-..-.|...+.|+..|.
T Consensus 22 GG~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 101 (318)
T 2woz_A 22 NDTAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARC 101 (318)
T ss_dssp CSSEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBC
T ss_pred cccceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccc
Confidence 444444443 34566432111223444433 3489999998752 21 11 2223445668888877776552
Q ss_pred eecCCCCCCCCCcceeecccCcEEEEec----CCeEeEEEE--eceeeeeecCCCCCCcceEEeecccccccCeEEEEcc
Q 043502 652 VIGGPPWDGITGKAMKVTAEDALFFVSK----NGRLLQFTV--ALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR 725 (949)
Q Consensus 652 V~~G~pwdgipG~~~~vt~~dklF~vt~----~GrLlq~tv--a~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~ 725 (949)
+ .++ +..++++|+..- .+..+.-.+ ....-+|......|...-..+ .... +++||+.|.
T Consensus 102 ---~------~~~---~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~-~~~iyv~GG 166 (318)
T 2woz_A 102 ---L------FGL---GEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHN--VISH-NGMIYCLGG 166 (318)
T ss_dssp ---S------CEE---EEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCE--EEEE-TTEEEEECC
T ss_pred ---c------cce---EEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccE--EEEE-CCEEEEEcC
Confidence 1 222 236889998753 233333222 455566776665554433222 2234 557877774
Q ss_pred C-------ceEeeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecC-C----CeEEEEEeCCCCeEEee
Q 043502 726 N-------GRLYQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSED-G----GLVEYHWNTWDGWNWVE 793 (949)
Q Consensus 726 N-------GrLYEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~sn-G----~LyEr~Wntg~gW~WVd 793 (949)
. ..++.|+-.+..|..-...+.... +.++.- +.+++|+.+-- + .-.|.| +.. .-.|..
T Consensus 167 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~----~~~~iyv~GG~~~~~~~~~~~~y-d~~-~~~W~~ 236 (318)
T 2woz_A 167 KTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS----MFGVAI----HKGKIVIAGGVTEDGLSASVEAF-DLK-TNKWEV 236 (318)
T ss_dssp EESSSCBCCCEEEEETTTTEEEEECCCSSCCB----SCEEEE----ETTEEEEEEEEETTEEEEEEEEE-ETT-TCCEEE
T ss_pred CCCCCCccceEEEEcCCCCEEEECCCCCCCcc----cceEEE----ECCEEEEEcCcCCCCccceEEEE-ECC-CCeEEE
Confidence 2 237779988889988754333211 122221 23568877631 1 122333 322 224554
Q ss_pred cCCCCCCceeecCCCCcccCceEEEEecC
Q 043502 794 HGTPGKGVTLVGSPGPCLHGNQLLLIGSD 822 (949)
Q Consensus 794 HGtP~~gvtvv~spG~sf~gsqLFviGSD 822 (949)
-...+.+-. ....+..+++||++|+-
T Consensus 237 ~~~~p~~r~---~~~~~~~~~~i~v~GG~ 262 (318)
T 2woz_A 237 MTEFPQERS---SISLVSLAGSLYAIGGF 262 (318)
T ss_dssp CCCCSSCCB---SCEEEEETTEEEEECCB
T ss_pred CCCCCCccc---ceEEEEECCEEEEECCe
Confidence 443221111 12233457899999874
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=78.99 E-value=54 Score=32.56 Aligned_cols=220 Identities=13% Similarity=0.081 Sum_probs=107.5
Q ss_pred EEecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCc
Q 043502 571 VMHGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGR 650 (949)
Q Consensus 571 vmh~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~ 650 (949)
+-+.++.++..++||.+.=+=...+.=+..-.+|..++....=+-++.|+....||++.+=........
T Consensus 128 ~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~----------- 196 (464)
T 3v7d_B 128 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCT----------- 196 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEE-----------
T ss_pred EEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEE-----------
Confidence 334556677777888764433334444444456665544333334557888888888766332221111
Q ss_pred eeecCCCCCCCCCcceeeccc-CcEEEEecCCeEeEEEEeceee-------------------------eeecCCCCCCc
Q 043502 651 QVIGGPPWDGITGKAMKVTAE-DALFFVSKNGRLLQFTVALRKF-------------------------KWKDCRHPLDT 704 (949)
Q Consensus 651 ~V~~G~pwdgipG~~~~vt~~-dklF~vt~~GrLlq~tva~rkw-------------------------kW~dhg~PPgT 704 (949)
+.+.|. =+.|..++.--..+ ..++.++.||.+.-+-...... ....|..
T Consensus 197 ~~~~~h-~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 271 (464)
T 3v7d_B 197 HVFEGH-NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA---- 271 (464)
T ss_dssp EEECCC-SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS----
T ss_pred EEECCC-CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc----
Confidence 112110 01111222211122 3466677788776544432221 1111111
Q ss_pred ceEEeecccccccCeEEEEccCceEeeecCce--ee--eeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEE
Q 043502 705 KVACIVDQELFRENIVFVVGRNGRLYQYNKVT--EL--WHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVE 780 (949)
Q Consensus 705 kIata~d~~~~r~~~iFvvG~NGrLYEwNg~T--W~--WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyE 780 (949)
.|..+ -..++.+++.+.||.++-|+-.+ -. ...|..+ +. ..++.|. +..++..+.||.++
T Consensus 272 ~v~~~----~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~---v~----~~~~~~~----~~~l~sg~~dg~i~- 335 (464)
T 3v7d_B 272 SVRTV----SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR---IY----STIYDHE----RKRCISASMDTTIR- 335 (464)
T ss_dssp CEEEE----EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC---EE----EEEEETT----TTEEEEEETTSCEE-
T ss_pred eEEEE----cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC---EE----EEEEcCC----CCEEEEEeCCCcEE-
Confidence 11111 23467888999999988876432 22 2222221 11 1333332 23466677777765
Q ss_pred EEEeCCCC---eEEeecCCCCCCceeecCCCCcccCceEEEEecCCceEEEEEeCC
Q 043502 781 YHWNTWDG---WNWVEHGTPGKGVTLVGSPGPCLHGNQLLLIGSDGKVYLRYMDQM 833 (949)
Q Consensus 781 r~Wntg~g---W~WVdHGtP~~gvtvv~spG~sf~gsqLFviGSDG~LYeRywdg~ 833 (949)
.|+..++ .....|..|...+ +|.+..|+..+.||.+ |.|+-.
T Consensus 336 -vwd~~~~~~~~~~~~h~~~v~~~--------~~~~~~l~s~s~dg~v--~vwd~~ 380 (464)
T 3v7d_B 336 -IWDLENGELMYTLQGHTALVGLL--------RLSDKFLVSAAADGSI--RGWDAN 380 (464)
T ss_dssp -EEETTTTEEEEEECCCSSCEEEE--------EECSSEEEEEETTSEE--EEEETT
T ss_pred -EEECCCCcEEEEEeCCCCcEEEE--------EEcCCEEEEEeCCCcE--EEEECC
Confidence 4664332 2244454443211 2335677777888875 578743
No 84
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=78.62 E-value=86 Score=34.70 Aligned_cols=152 Identities=16% Similarity=0.160 Sum_probs=80.8
Q ss_pred cCCcEEEEEecCCceeEee-ccCCCccccCCCCCCCceeEEe-eccccCCceEEEEccCCceeeeccCCchhhhhhcccc
Q 043502 236 QDGERVYFCTKNGLLLELS-EVEPPRWLNHGRPPGANVAAIA-DAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSK 313 (949)
Q Consensus 236 ~dg~~lff~~knG~LLe~t-el~p~rW~~hg~PPga~VA~I~-D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~ 313 (949)
.+| +||+.+.++-|..+. +-.+++-.. ..|++..|.+|. |. .+.+++...++-||.||..++ .++ ++..+
T Consensus 182 ~~g-~lwigt~~~Gl~~~~~~~~~~~~~~-~~~~~~~i~~i~~d~----~g~lwigt~~~Gl~~~~~~~~-~~~-~~~~~ 253 (795)
T 4a2l_A 182 QGD-QIYIGTSTDGLYTYSITQKTFEKVI-PILGTKQIQAILQQS----PTRIWVATEGAGLFLINPKTK-EIK-NYLHS 253 (795)
T ss_dssp ETT-EEEEEESSSCEEEEETTTCCEEECC-----CCCEEEEEEEE----TTEEEEEEBSSCEEEEETTTT-EEE-EECCC
T ss_pred CCC-CEEEEECCCCEEEEeCCCCeEEEec-CCCCCCeeEEEEEcC----CCCEEEEECCCCeEEEeCCCC-eEE-EeecC
Confidence 344 677777754466664 222222111 124456676665 33 466776665556999999886 333 22221
Q ss_pred ccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccceeEEEcCCCCCCcc--cccceeccCCccccceEEE
Q 043502 314 GTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKWKWIIHGSPEDTHL--TSITPVQQDESNEKFFSLF 391 (949)
Q Consensus 314 ~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkWkWi~HGtP~~~~l--~siT~v~~d~~~~~~~sLF 391 (949)
.. ...++. ...+..+.-+..+.|.+-|.+ +|.-+......+..+.|.......| .+|..+.+|.. -.|+
T Consensus 254 ~~-~~~~l~---~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~----g~lW 324 (795)
T 4a2l_A 254 PS-NPKSIS---SNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQ----GGMW 324 (795)
T ss_dssp TT-CTTSCS---CSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTT----SCEE
T ss_pred CC-CccccC---CCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCC----cCEE
Confidence 10 011111 122334444445578888876 6765555567788777653222222 34666666653 3488
Q ss_pred EEcccceEEEEee
Q 043502 392 LTTSAGAVFEYQI 404 (949)
Q Consensus 392 ~t~S~G~Vyey~~ 404 (949)
+-|.+|-++.|..
T Consensus 325 igt~~~Gl~~~~~ 337 (795)
T 4a2l_A 325 LGTYFGGLNYYHP 337 (795)
T ss_dssp EEESSSCEEEECG
T ss_pred EEECCCCeEEeCC
Confidence 8777777877754
No 85
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=78.45 E-value=43 Score=31.18 Aligned_cols=155 Identities=9% Similarity=-0.013 Sum_probs=82.0
Q ss_pred eecceeecCCc-EEEEEecCCceeEeec---cCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCch
Q 043502 229 IKSGVVSQDGE-RVYFCTKNGLLLELSE---VEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKP 304 (949)
Q Consensus 229 ik~gvvs~dg~-~lff~~knG~LLe~te---l~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkp 304 (949)
|.+=.++.||. .|+.+..+|.+.-+.- -+...... .+....|.+|+=.. .+.+++.+.+|.++-||-.+..
T Consensus 59 v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 59 LLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN--NEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYG 133 (342)
T ss_dssp EEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS--CCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHT
T ss_pred eEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc--cCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccc
Confidence 33445678899 9999999998765532 11112222 11233454443222 6899999999999999865410
Q ss_pred h-----hhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeec-cc--eeEEEcCCCCCCcccccc
Q 043502 305 S-----WRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQ-RK--WKWIIHGSPEDTHLTSIT 376 (949)
Q Consensus 305 s-----W~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~q-rk--WkWi~HGtP~~~~l~siT 376 (949)
. ..+-+..-. .... .......++ .|+..+.+|.+.-+.+.. .. .+-... ++...++++.
T Consensus 134 ~~~~~~~~~~~~~~~-----~~~~---v~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~i~ 200 (342)
T 1yfq_A 134 DGVIAVKNLNSNNTK-----VKNK---IFTMDTNSS---RLIVGMNNSQVQWFRLPLCEDDNGTIEES--GLKYQIRDVA 200 (342)
T ss_dssp TBCEEEEESCSSSSS-----SCCC---EEEEEECSS---EEEEEESTTEEEEEESSCCTTCCCEEEEC--SCSSCEEEEE
T ss_pred cccccccCCeeeEEe-----eCCc---eEEEEecCC---cEEEEeCCCeEEEEECCccccccceeeec--CCCCceeEEE
Confidence 0 000010000 0000 011111222 177778888888777765 32 333333 3333334433
Q ss_pred eeccCCccccceEEEEEcccceEEEEeecc
Q 043502 377 PVQQDESNEKFFSLFLTTSAGAVFEYQIPK 406 (949)
Q Consensus 377 ~v~~d~~~~~~~sLF~t~S~G~Vyey~~~k 406 (949)
-... ++..|+..+.||.|+.+.+..
T Consensus 201 ~~~~-----~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 201 LLPK-----EQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp ECSG-----GGCEEEEEETTSEEEEEECCT
T ss_pred ECCC-----CCCEEEEEecCCcEEEEEEcC
Confidence 2210 235677778899999988843
No 86
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=78.31 E-value=29 Score=38.90 Aligned_cols=158 Identities=9% Similarity=0.116 Sum_probs=84.1
Q ss_pred eEEEEec-CceEEEEe---eC----CeeEEEEecCCEEEEEecCCCCCccccccc--cccceEEEeccC---cEEEEEec
Q 043502 568 RLRVMHG-SRSFFLIT---DG----GFTFEYLYAESVWLWLRHDHSTPMRGVLGN--YNGSLYMVDLYG---SLLIRERS 634 (949)
Q Consensus 568 ~~rvmh~-~~s~fliT---d~----G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~--~ngsLf~vd~~G---sL~~R~~~ 634 (949)
|--+... +.++|++- .+ ...+.|=-..+.|.-+. ..|+|..+...+ ++|+||+++-.. .++ + .+
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~-~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~-~-yd 519 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK-SLSHTRFRHSACSLPDGNVLILGGVTEGPAML-L-YN 519 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECC-CCSBCCBSCEEEECTTSCEEEECCBCSSCSEE-E-EE
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECC-CCCCCcccceEEEEcCCEEEEECCCCCCCCEE-E-EE
Confidence 3344453 67788872 11 13444444556787773 345666665555 499999986432 222 2 23
Q ss_pred CCCceeeeccC---CCCCceeecCCCCCCCCCcc-eeeccc-CcEEEEecC--------CeEeEEEEeceee----eeec
Q 043502 635 SNELAWINCTA---MRKGRQVIGGPPWDGITGKA-MKVTAE-DALFFVSKN--------GRLLQFTVALRKF----KWKD 697 (949)
Q Consensus 635 g~~~~W~n~t~---mr~G~~V~~G~pwdgipG~~-~~vt~~-dklF~vt~~--------GrLlq~tva~rkw----kW~d 697 (949)
-..-.|..... |+..+. +.+ +-+..+ +++|+..-. ..++.+-.....| +|..
T Consensus 520 ~~t~~W~~~~~~g~~p~~r~-----------~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~ 588 (695)
T 2zwa_A 520 VTEEIFKDVTPKDEFFQNSL-----------VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIK 588 (695)
T ss_dssp TTTTEEEECCCSSGGGGSCC-----------BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEE
T ss_pred CCCCceEEccCCCCCCCccc-----------ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEE
Confidence 34456766654 333321 112 211222 778887632 3466666666654 5766
Q ss_pred CCC-CCCcceEEeecccccccCeEEEEcc-C--------ceEeeecCceeeeee
Q 043502 698 CRH-PLDTKVACIVDQELFRENIVFVVGR-N--------GRLYQYNKVTELWHE 741 (949)
Q Consensus 698 hg~-PPgTkIata~d~~~~r~~~iFvvG~-N--------GrLYEwNg~TW~Whd 741 (949)
... |+-..... ...++++++||+.|. + ..++.|+-.+..|..
T Consensus 589 ~~~~p~~~R~~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~ 640 (695)
T 2zwa_A 589 KLQHPLFQRYGS--QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTS 640 (695)
T ss_dssp EEECGGGCCBSC--EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEE
T ss_pred cCCCCCCCcccc--eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEE
Confidence 544 32222211 123555367777664 2 236778888888984
No 87
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=78.05 E-value=17 Score=35.55 Aligned_cols=68 Identities=21% Similarity=0.226 Sum_probs=36.1
Q ss_pred ecceeecCCcEEEEEe--------cCCceeEee-ccCCCcc-ccCCCCCCCceeEEe-eccccCCceEEEEccCCceeee
Q 043502 230 KSGVVSQDGERVYFCT--------KNGLLLELS-EVEPPRW-LNHGRPPGANVAAIA-DAGNVRPEVVYTISSTGDLYEY 298 (949)
Q Consensus 230 k~gvvs~dg~~lff~~--------knG~LLe~t-el~p~rW-~~hg~PPga~VA~I~-D~~~~R~~vVftiss~GdLYeY 298 (949)
..=.++.||+.||++. ++|.|..+. .-.++.. ..+. + .+..++ +.. .+.++++.+.+|.++-|
T Consensus 257 ~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~---~-~~~~~~~~~~--g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 257 RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP---G-NKRHIVSGNT--ENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE---E-CEEEEEECSS--TTEEEEEETTTTEEEEE
T ss_pred eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC---C-CcceEEECCC--CCEEEEEecCCCEEEEE
Confidence 3445678999999988 466665554 1111111 1111 1 122221 111 12344555889999999
Q ss_pred ccCCc
Q 043502 299 DRISK 303 (949)
Q Consensus 299 nr~tk 303 (949)
|..+.
T Consensus 331 d~~~~ 335 (433)
T 3bws_A 331 DLKEK 335 (433)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 98754
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=78.04 E-value=59 Score=32.48 Aligned_cols=211 Identities=13% Similarity=0.118 Sum_probs=103.9
Q ss_pred cCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCceee
Q 043502 574 GSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVI 653 (949)
Q Consensus 574 ~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~ 653 (949)
.++.++..+.||.+.=+=...+.-+..-.+|..++.. +.-.++.|+....+|++.+=.-......-. .++.
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~-l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~--------~~~~ 252 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH-LRFNNGMMVTCSKDRSIAVWDMASPTDITL--------RRVL 252 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE-EECCTTEEEEEETTSCEEEEECSSSSCCEE--------EEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEE-EEEcCCEEEEeeCCCcEEEEeCCCCCCcee--------eeEe
Confidence 3455666677776654433444444444455443322 222355777778888877644332221100 0222
Q ss_pred cCCCCCCCCCcceeec-ccCcEEEEecCCeEeEEEEecee--eeeecCCCCCCcceEEeecccccccCeEEEEccCceEe
Q 043502 654 GGPPWDGITGKAMKVT-AEDALFFVSKNGRLLQFTVALRK--FKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLY 730 (949)
Q Consensus 654 ~G~pwdgipG~~~~vt-~~dklF~vt~~GrLlq~tva~rk--wkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLY 730 (949)
.| -.+....+. ....+++++.||.+.-+-....+ .+...|..+ |..+ .+.++.+++.+.||.++
T Consensus 253 ~~-----~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----v~~~----~~~~~~l~~g~~dg~i~ 319 (435)
T 1p22_A 253 VG-----HRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG----IACL----QYRDRLVVSGSSDNTIR 319 (435)
T ss_dssp CC-----CSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEEE----EEETTEEEEEETTSCEE
T ss_pred cC-----CCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc----EEEE----EeCCCEEEEEeCCCeEE
Confidence 22 122222222 33445666778887654433222 233334332 3222 23677889999999988
Q ss_pred eecCce--e--eeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCC------------CeEEeec
Q 043502 731 QYNKVT--E--LWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWD------------GWNWVEH 794 (949)
Q Consensus 731 EwNg~T--W--~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~------------gW~WVdH 794 (949)
-|+-.+ - ....|..+-. ++.. -+..++..+.||.+. .|+... --....|
T Consensus 320 iwd~~~~~~~~~~~~h~~~v~---------~~~~----~~~~l~sg~~dg~i~--vwd~~~~~~~~~~~~~~~~~~~~~h 384 (435)
T 1p22_A 320 LWDIECGACLRVLEGHEELVR---------CIRF----DNKRIVSGAYDGKIK--VWDLVAALDPRAPAGTLCLRTLVEH 384 (435)
T ss_dssp EEETTTCCEEEEECCCSSCEE---------EEEC----CSSEEEEEETTSCEE--EEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred EEECCCCCEEEEEeCCcCcEE---------EEEe----cCCEEEEEeCCCcEE--EEECCCCCCccccccchheeeccCC
Confidence 876432 1 2333332211 1221 123466667777764 455211 1224445
Q ss_pred CCCCCCceeecCCCCcccCceEEEEecCCceEEEEEe
Q 043502 795 GTPGKGVTLVGSPGPCLHGNQLLLIGSDGKVYLRYMD 831 (949)
Q Consensus 795 GtP~~gvtvv~spG~sf~gsqLFviGSDG~LYeRywd 831 (949)
..|...+ +|++..|+..+.||.+ +.|+
T Consensus 385 ~~~v~~l--------~~~~~~l~s~s~Dg~i--~iwd 411 (435)
T 1p22_A 385 SGRVFRL--------QFDEFQIVSSSHDDTI--LIWD 411 (435)
T ss_dssp SSCCCCE--------EECSSCEEECCSSSEE--EEEC
T ss_pred CCCeEEE--------EeCCCEEEEEeCCCEE--EEEE
Confidence 5554322 2455666666668876 5676
No 89
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=77.82 E-value=67 Score=36.02 Aligned_cols=194 Identities=10% Similarity=0.133 Sum_probs=92.9
Q ss_pred CCCCccccccccccceEEEeccCc-----EEEEEecCCCceeeecc-C-----CCCCceeecCCCCCCCCCcceeecc-c
Q 043502 604 HSTPMRGVLGNYNGSLYMVDLYGS-----LLIRERSSNELAWINCT-A-----MRKGRQVIGGPPWDGITGKAMKVTA-E 671 (949)
Q Consensus 604 h~T~m~g~~g~~ngsLf~vd~~Gs-----L~~R~~~g~~~~W~n~t-~-----mr~G~~V~~G~pwdgipG~~~~vt~-~ 671 (949)
-|.+--|+..++++.||+.+-.+. ++.= +-..-.|.... . |+..| -+.++-+.. +
T Consensus 385 ~p~rr~g~~~~~~~~iyv~GG~~~~~~~~v~~y--d~~~~~W~~~~~~~p~~~~p~~R-----------~~hs~~~~~~~ 451 (695)
T 2zwa_A 385 PINRKFGDVDVAGNDVFYMGGSNPYRVNEILQL--SIHYDKIDMKNIEVSSSEVPVAR-----------MCHTFTTISRN 451 (695)
T ss_dssp TTCCBSCEEEECSSCEEEECCBSSSBCCCEEEE--EECSSCEEEEECCCCCSCCCCCC-----------BSCEEEEETTT
T ss_pred CCCCceeEEEEECCEEEEECCCCCCCcCcEEEE--ECCCCeEEEeccCCCCCCCCccc-----------cceEEEEEccC
Confidence 345555665558889998876542 2221 11223455444 3 22222 122332222 8
Q ss_pred CcEEEEecC-------CeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEcc-Cc--eEeeecCceeeeee
Q 043502 672 DALFFVSKN-------GRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR-NG--RLYQYNKVTELWHE 741 (949)
Q Consensus 672 dklF~vt~~-------GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~-NG--rLYEwNg~TW~Whd 741 (949)
+++|+..-. ..++.+ ....-+|......|-..-..+ ..++.+++|||.|. ++ .++.|+-.+..|..
T Consensus 452 ~~lyv~GG~~~~~~~~~dv~~y--d~~t~~W~~~~~~p~~R~~h~--~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~ 527 (695)
T 2zwa_A 452 NQLLLIGGRKAPHQGLSDNWIF--DMKTREWSMIKSLSHTRFRHS--ACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKD 527 (695)
T ss_dssp TEEEEECCBSSTTCBCCCCEEE--ETTTTEEEECCCCSBCCBSCE--EEECTTSCEEEECCBCSSCSEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCCCCccccEEEE--eCCCCcEEECCCCCCCcccce--EEEEcCCEEEEECCCCCCCCEEEEECCCCceEE
Confidence 888887421 123333 344445666655544333222 22322456666653 43 58889988889987
Q ss_pred cCCCCceeeecCCCceec-CCCCCCcceEEEEecC--------CCeEEEEEeCCCCe----EEeecCC-CCCCceeecCC
Q 043502 742 HYQSQHLVLSILPGTAMR-PPSASLTGSLFMLSED--------GGLVEYHWNTWDGW----NWVEHGT-PGKGVTLVGSP 807 (949)
Q Consensus 742 HGkP~~t~ls~~pGtAM~-psk~sl~gslFm~~sn--------G~LyEr~Wntg~gW----~WVdHGt-P~~gvtvv~sp 807 (949)
--.....-..+...+|++ . ...+++|+.+.. ..++.+--+ ...| .|..-.. |..+ -. ..
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~---~~~~~iyv~GG~~~~~~~~~~~v~~yd~~-~~~w~~~~~W~~~~~~p~~~--R~-~~ 600 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFD---PVSKQGIILGGGFMDQTTVSDKAIIFKYD-AENATEPITVIKKLQHPLFQ--RY-GS 600 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEE---TTTTEEEEECCBCTTSSCBCCEEEEEEEC-TTCSSCCEEEEEEEECGGGC--CB-SC
T ss_pred ccCCCCCCCcccceeEEEEe---CCCCEEEEECCcCCCCCeeeCcEEEEEcc-CCccccceEEEEcCCCCCCC--cc-cc
Confidence 643111111111122222 1 112568887643 235554444 3443 4554433 3211 11 12
Q ss_pred CCcccC-ceEEEEec
Q 043502 808 GPCLHG-NQLLLIGS 821 (949)
Q Consensus 808 G~sf~g-sqLFviGS 821 (949)
+.+..+ ++||++|+
T Consensus 601 ~~~~~~~~~iyv~GG 615 (695)
T 2zwa_A 601 QIKYITPRKLLIVGG 615 (695)
T ss_dssp EEEEEETTEEEEECC
T ss_pred eEEEeCCCEEEEECC
Confidence 223456 89999997
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=77.34 E-value=45 Score=30.94 Aligned_cols=70 Identities=13% Similarity=0.027 Sum_probs=40.9
Q ss_pred cceeecCCcEEEEEecCCceeEeeccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 231 SGVVSQDGERVYFCTKNGLLLELSEVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 231 ~gvvs~dg~~lff~~knG~LLe~tel~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
+=.++.||+.|+-+..+|.+.-... ....-..........+..+.- .-..+.+++.+.+|.++-||....
T Consensus 91 ~~~~s~dg~~l~s~~~d~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~s~s~d~~~~~~d~~~~ 160 (340)
T 4aow_A 91 DVVISSDGQFALSGSWDGTLRLWDL-TTGTTTRRFVGHTKDVLSVAF--SSDNRQIVSGSRDKTIKLWNTLGV 160 (340)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEET-TTTEEEEEEECCSSCEEEEEE--CTTSSCEEEEETTSCEEEECTTSC
T ss_pred EEEECCCCCEEEEEcccccceEEee-cccceeeeecCCCCceeEEEE--eecCccceeecCCCeEEEEEeCCC
Confidence 3346788888888888887655442 222222222222223333222 223467888999999999886554
No 91
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=77.22 E-value=52 Score=31.46 Aligned_cols=179 Identities=13% Similarity=0.177 Sum_probs=94.4
Q ss_pred eEEEEecCceEEEEee-----CCeeEEEEecCCEEEEEecCCCCCcccccc-ccccceEEEeccC------cEEEEEecC
Q 043502 568 RLRVMHGSRSFFLITD-----GGFTFEYLYAESVWLWLRHDHSTPMRGVLG-NYNGSLYMVDLYG------SLLIRERSS 635 (949)
Q Consensus 568 ~~rvmh~~~s~fliTd-----~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g-~~ngsLf~vd~~G------sL~~R~~~g 635 (949)
|--+.. +.++|++-- -..++.|=-..+.|.=+. ..|.|..+... .++++||+..-.. +-.++ .+-
T Consensus 49 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~-~d~ 125 (306)
T 3ii7_A 49 AACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL-GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFEC-YDT 125 (306)
T ss_dssp CEEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEEEEEE-CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEE-EET
T ss_pred eEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeEEECC-CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEE-EeC
Confidence 333444 456777632 123333434567777663 34566555444 3899999986432 11222 334
Q ss_pred CCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEec----------CCeEeEEEEeceeeeeecCCCCCCcc
Q 043502 636 NELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSK----------NGRLLQFTVALRKFKWKDCRHPLDTK 705 (949)
Q Consensus 636 ~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~----------~GrLlq~tva~rkwkW~dhg~PPgTk 705 (949)
..-.|.....|+..+. +.++ +..++++|+..- ...++.+- ...-+|......|-..
T Consensus 126 ~~~~W~~~~~~p~~r~-----------~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd--~~~~~W~~~~~~p~~r 191 (306)
T 3ii7_A 126 RTESWHTKPSMLTQRC-----------SHGM-VEANGLIYVCGGSLGNNVSGRVLNSCEVYD--PATETWTELCPMIEAR 191 (306)
T ss_dssp TTTEEEEECCCSSCCB-----------SCEE-EEETTEEEEECCEESCTTTCEECCCEEEEE--TTTTEEEEECCCSSCC
T ss_pred CCCceEeCCCCcCCcc-----------eeEE-EEECCEEEEECCCCCCCCcccccceEEEeC--CCCCeEEECCCccchh
Confidence 4557888877776542 2222 336889998763 12233333 3344565554443333
Q ss_pred eEEeecccccccCeEEEEcc-Cc-----eEeeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEec
Q 043502 706 VACIVDQELFRENIVFVVGR-NG-----RLYQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSE 774 (949)
Q Consensus 706 Iata~d~~~~r~~~iFvvG~-NG-----rLYEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~s 774 (949)
-..+ ..++ +++||+.|. ++ .++.|+-.+..|..-...+.... +.++.. +.+++|+.+.
T Consensus 192 ~~~~--~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~----~~~~i~v~GG 255 (306)
T 3ii7_A 192 KNHG--LVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGV----TVKCAA----VGSIVYVLAG 255 (306)
T ss_dssp BSCE--EEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBS----CCEEEE----ETTEEEEEEC
T ss_pred hcce--EEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcc----ceeEEE----ECCEEEEEeC
Confidence 2111 2344 456766653 33 36779999989998765443211 122221 2456888764
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=77.16 E-value=58 Score=31.95 Aligned_cols=63 Identities=11% Similarity=0.094 Sum_probs=34.5
Q ss_pred eecccC--cEEEEecCCeEeEEEEeceeeeeec--CCCCCCcce-EEeecccccccCeEEEEccCceEeeecC
Q 043502 667 KVTAED--ALFFVSKNGRLLQFTVALRKFKWKD--CRHPLDTKV-ACIVDQELFRENIVFVVGRNGRLYQYNK 734 (949)
Q Consensus 667 ~vt~~d--klF~vt~~GrLlq~tva~rkwkW~d--hg~PPgTkI-ata~d~~~~r~~~iFvvG~NGrLYEwNg 734 (949)
....++ .++.++.||.+.-+-....+..-.- .+.+ ..| ..+..+ .++.+++++.||+++-|+-
T Consensus 138 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~ 205 (402)
T 2aq5_A 138 AWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHP--DTIYSVDWSR---DGALICTSCRDKRVRVIEP 205 (402)
T ss_dssp EECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCC--SCEEEEEECT---TSSCEEEEETTSEEEEEET
T ss_pred EECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCC--CceEEEEECC---CCCEEEEEecCCcEEEEeC
Confidence 344454 3666788898765554433332222 1222 123 222222 4667888889999888763
No 93
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=76.98 E-value=53 Score=36.05 Aligned_cols=76 Identities=16% Similarity=0.215 Sum_probs=39.2
Q ss_pred cceeecCCcEEEEEecCC---ceeEeeccCCC--ccccCCCCCCCceeEEeeccccCCceEEEEcc---CCceeeeccCC
Q 043502 231 SGVVSQDGERVYFCTKNG---LLLELSEVEPP--RWLNHGRPPGANVAAIADAGNVRPEVVYTISS---TGDLYEYDRIS 302 (949)
Q Consensus 231 ~gvvs~dg~~lff~~knG---~LLe~tel~p~--rW~~hg~PPga~VA~I~D~~~~R~~vVftiss---~GdLYeYnr~t 302 (949)
+..+|.||+.|+|....+ +-|-+-.+... +++.--.+.++....+. .-...++|+..+ +++||.+|-.+
T Consensus 238 ~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~---~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 238 GATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVD---NKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp EEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEE---EETTEEEEEECTTCTTCEEEEEETTS
T ss_pred EEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEe---ccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 445799999998887644 23333333322 23322223344333321 112345555544 47899998765
Q ss_pred c--hhhhhh
Q 043502 303 K--PSWRKH 309 (949)
Q Consensus 303 k--psW~kH 309 (949)
. ..|+.-
T Consensus 315 ~~~~~~~~l 323 (693)
T 3iuj_A 315 PGPAHWRDL 323 (693)
T ss_dssp CCGGGCEEE
T ss_pred CCccccEEE
Confidence 3 135543
No 94
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=76.87 E-value=1.1e+02 Score=34.96 Aligned_cols=145 Identities=9% Similarity=0.019 Sum_probs=78.0
Q ss_pred EEEEecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccc-eEEEeccCcEEEEEecCCCceeeeccCCC
Q 043502 569 LRVMHGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGS-LYMVDLYGSLLIRERSSNELAWINCTAMR 647 (949)
Q Consensus 569 ~rvmh~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngs-Lf~vd~~GsL~~R~~~g~~~~W~n~t~mr 647 (949)
+.+-..++.+++.+.+|.++=+-...+.-.-.-.+|..++....=+-+|+ |+..+.+|++.+-........... .
T Consensus 967 ~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~--~-- 1042 (1249)
T 3sfz_A 967 CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ--A-- 1042 (1249)
T ss_dssp EEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB--C--
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEe--c--
Confidence 33444566677778888776554444444444455665555443344444 666678888766544333322111 0
Q ss_pred CCceeecCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceee--eeecCCCCCCcceEEeecccccccCeEEEEcc
Q 043502 648 KGRQVIGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKF--KWKDCRHPLDTKVACIVDQELFRENIVFVVGR 725 (949)
Q Consensus 648 ~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkw--kW~dhg~PPgTkIata~d~~~~r~~~iFvvG~ 725 (949)
. .+ +=..+.+..+..++.++.+|.+.-+-....+. +...|..+ =+.++..+ .++.+++.+.
T Consensus 1043 -~----~~------~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-v~~~~~s~-----d~~~l~s~s~ 1105 (1249)
T 3sfz_A 1043 -H----QE------TVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGT-VLSCAISS-----DATKFSSTSA 1105 (1249)
T ss_dssp -C----SS------CEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSC-CCCEEECS-----SSSSCEEECC
T ss_pred -C----CC------cEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCc-EEEEEECC-----CCCEEEEEcC
Confidence 0 00 11223445677888888898876554433322 23334333 23334333 2445778888
Q ss_pred CceEeeecC
Q 043502 726 NGRLYQYNK 734 (949)
Q Consensus 726 NGrLYEwNg 734 (949)
||.++-|+-
T Consensus 1106 d~~v~iwd~ 1114 (1249)
T 3sfz_A 1106 DKTAKIWSF 1114 (1249)
T ss_dssp SSCCCEECS
T ss_pred CCcEEEEEC
Confidence 998877654
No 95
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=76.69 E-value=57 Score=31.59 Aligned_cols=155 Identities=13% Similarity=0.237 Sum_probs=81.5
Q ss_pred cCCEEEEEecCCCCCccc-cccccccceEEEeccC----c---EEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCc
Q 043502 593 AESVWLWLRHDHSTPMRG-VLGNYNGSLYMVDLYG----S---LLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGK 664 (949)
Q Consensus 593 ~~~~WlWl~H~h~T~m~g-~~g~~ngsLf~vd~~G----s---L~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~ 664 (949)
..+.|.=+. ..|.|..+ +...++++||++.-.. . -.++ .+-..-.|.....|+..+. +.
T Consensus 86 ~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~-yd~~~~~W~~~~~~p~~r~-----------~~ 152 (318)
T 2woz_A 86 VSSEWVGLP-PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLC-YDPVAAKWSEVKNLPIKVY-----------GH 152 (318)
T ss_dssp TTTEEEECS-CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEE-EETTTTEEEEECCCSSCEE-----------SC
T ss_pred CCCcEEECC-CCCccccccceEEECCEEEEEcCccCCCCcccceEEE-EeCCCCCEeECCCCCCccc-----------cc
Confidence 356665442 23344333 3334899999986532 1 1222 2445667888877766542 22
Q ss_pred ceeecccCcEEEEec---CC----eEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEc-cCc-----eEee
Q 043502 665 AMKVTAEDALFFVSK---NG----RLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVG-RNG-----RLYQ 731 (949)
Q Consensus 665 ~~~vt~~dklF~vt~---~G----rLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG-~NG-----rLYE 731 (949)
++ +..++++|+..- ++ .++.+-... -+|......|-..-..+ ..++ +++||+.| .++ .++.
T Consensus 153 ~~-~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~--~~~~-~~~iyv~GG~~~~~~~~~~~~ 226 (318)
T 2woz_A 153 NV-ISHNGMIYCLGGKTDDKKCTNRVFIYNPKK--GDWKDLAPMKTPRSMFG--VAIH-KGKIVIAGGVTEDGLSASVEA 226 (318)
T ss_dssp EE-EEETTEEEEECCEESSSCBCCCEEEEETTT--TEEEEECCCSSCCBSCE--EEEE-TTEEEEEEEEETTEEEEEEEE
T ss_pred EE-EEECCEEEEEcCCCCCCCccceEEEEcCCC--CEEEECCCCCCCcccce--EEEE-CCEEEEEcCcCCCCccceEEE
Confidence 22 337889998763 22 244444344 44555444333222111 2234 44666665 332 3566
Q ss_pred ecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEec
Q 043502 732 YNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSE 774 (949)
Q Consensus 732 wNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~s 774 (949)
|+-.+..|..-...+.... +.++.. +.+++|+.+-
T Consensus 227 yd~~~~~W~~~~~~p~~r~----~~~~~~----~~~~i~v~GG 261 (318)
T 2woz_A 227 FDLKTNKWEVMTEFPQERS----SISLVS----LAGSLYAIGG 261 (318)
T ss_dssp EETTTCCEEECCCCSSCCB----SCEEEE----ETTEEEEECC
T ss_pred EECCCCeEEECCCCCCccc----ceEEEE----ECCEEEEECC
Confidence 9988889998765444321 222221 3457888754
No 96
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=75.95 E-value=55 Score=31.03 Aligned_cols=12 Identities=33% Similarity=0.462 Sum_probs=8.9
Q ss_pred CceEEEEecCCc
Q 043502 813 GNQLLLIGSDGK 824 (949)
Q Consensus 813 gsqLFviGSDG~ 824 (949)
+.+||+.+.+|.
T Consensus 291 g~~L~v~~~~g~ 302 (333)
T 2dg1_A 291 TNQLIICSNDIE 302 (333)
T ss_dssp SCEEEEEEECGG
T ss_pred CCEEEEEeCccC
Confidence 468888888863
No 97
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=75.92 E-value=47 Score=37.94 Aligned_cols=76 Identities=17% Similarity=0.244 Sum_probs=43.7
Q ss_pred cccCeEEEEccCceEee--ecCceeeeeecCCCCceeeecCCC---ceecCCCCCCcceEEEEecC-CCeEEEEEeCCCC
Q 043502 715 FRENIVFVVGRNGRLYQ--YNKVTELWHEHYQSQHLVLSILPG---TAMRPPSASLTGSLFMLSED-GGLVEYHWNTWDG 788 (949)
Q Consensus 715 ~r~~~iFvvG~NGrLYE--wNg~TW~WhdHGkP~~t~ls~~pG---tAM~psk~sl~gslFm~~sn-G~LyEr~Wntg~g 788 (949)
.+.+++|+.++.+.||. +.|.||.=.. .++....+. .+ -++.| .-...+|+...+ +.||. .-|.|..
T Consensus 131 ~~~~~v~~g~~~~gl~~S~DgG~TW~~~~--~~~~~~~~~-~~~~~i~~~p---~~~~~~~~~~~~~~~v~~-S~DgG~T 203 (789)
T 1sqj_A 131 FNSNEVWMGTRTEGIWKSSDRAKTWTNVT--SIPDAFTNG-IGYTSVIFDP---ERNGTIYASATAPQGMYV-THDGGVS 203 (789)
T ss_dssp TEEEEEEEECSSSCEEEESSTTSSCEEET--TSCCCCSTT-TCEEEEEECT---TSTTCEEEEESSTTCEEE-ESSTTSS
T ss_pred CCCCEEEEEeccCCEEEECCCCcccCCCc--cCccccCCC-CCeEEEEECC---CCCCEEEEEEcCCCeEEE-EcCCCcC
Confidence 35678999887888998 7777766332 221100000 11 11112 123478888877 77775 5666778
Q ss_pred eEEeecCCCC
Q 043502 789 WNWVEHGTPG 798 (949)
Q Consensus 789 W~WVdHGtP~ 798 (949)
|.=+. |.|.
T Consensus 204 W~~~~-~~~~ 212 (789)
T 1sqj_A 204 WEPVA-GQPS 212 (789)
T ss_dssp CEECT-TCCC
T ss_pred cccCC-CCcC
Confidence 88666 5553
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=75.82 E-value=52 Score=30.68 Aligned_cols=147 Identities=13% Similarity=0.081 Sum_probs=68.2
Q ss_pred eEEEEecCceEEEEeeCCeeEEEEecCCE----EEEEecCCCCCccccccccccc--eEEEeccCcEEEEEe-cCCCcee
Q 043502 568 RLRVMHGSRSFFLITDGGFTFEYLYAESV----WLWLRHDHSTPMRGVLGNYNGS--LYMVDLYGSLLIRER-SSNELAW 640 (949)
Q Consensus 568 ~~rvmh~~~s~fliTd~G~~fE~~~~~~~----WlWl~H~h~T~m~g~~g~~ngs--Lf~vd~~GsL~~R~~-~g~~~~W 640 (949)
.+..-..++.|+....||.+.=+=...+. -.-+. +|..++....=+-+|+ |+....+|++.+=.. .....
T Consensus 16 ~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-- 92 (342)
T 1yfq_A 16 DIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-- 92 (342)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE--
T ss_pred EEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce--
Confidence 34444555666666677765433222222 22221 3333333222223565 777788888766443 33222
Q ss_pred eeccCCCCCceeecCC-CCCCCCCcceeecccCcEEEEecCCeEeEEEEec---------eeeeeecCCCCCCcceEEee
Q 043502 641 INCTAMRKGRQVIGGP-PWDGITGKAMKVTAEDALFFVSKNGRLLQFTVAL---------RKFKWKDCRHPLDTKVACIV 710 (949)
Q Consensus 641 ~n~t~mr~G~~V~~G~-pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~---------rkwkW~dhg~PPgTkIata~ 710 (949)
+.+.+. .=..|-. +.+...+.++.++.||.+.-+-... .+-...-. ....|..+
T Consensus 93 ----------~~~~~~~~~~~v~~--l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~v~~~- 156 (342)
T 1yfq_A 93 ----------QALTNNEANLGICR--ICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK---VKNKIFTM- 156 (342)
T ss_dssp ----------EECBSCCCCSCEEE--EEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---SCCCEEEE-
T ss_pred ----------EeccccCCCCceEE--EEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---eCCceEEE-
Confidence 111110 0011111 2222356677788888876543332 22111111 11222211
Q ss_pred cccccccCeEEEEccCceEeeecCce
Q 043502 711 DQELFRENIVFVVGRNGRLYQYNKVT 736 (949)
Q Consensus 711 d~~~~r~~~iFvvG~NGrLYEwNg~T 736 (949)
.+..+.+++.+.+|.++-|+-.+
T Consensus 157 ---~~~~~~l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 157 ---DTNSSRLIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp ---EECSSEEEEEESTTEEEEEESSC
T ss_pred ---EecCCcEEEEeCCCeEEEEECCc
Confidence 12233488999999988876443
No 99
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=75.76 E-value=62 Score=31.59 Aligned_cols=19 Identities=21% Similarity=0.288 Sum_probs=12.8
Q ss_pred cCeEEEE-ccCceEeeecCc
Q 043502 717 ENIVFVV-GRNGRLYQYNKV 735 (949)
Q Consensus 717 ~~~iFvv-G~NGrLYEwNg~ 735 (949)
++.+|++ +.+|+++-|+-.
T Consensus 314 g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 314 ENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp TTEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEecCCCEEEEEECC
Confidence 3456666 788988886643
No 100
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=75.25 E-value=43 Score=36.55 Aligned_cols=114 Identities=11% Similarity=0.158 Sum_probs=64.2
Q ss_pred ccceEEEecc----------CcEEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEec--CCeE
Q 043502 616 NGSLYMVDLY----------GSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSK--NGRL 683 (949)
Q Consensus 616 ngsLf~vd~~----------GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~--~GrL 683 (949)
+|+||+..-. +.-.+..++-..-.|.....|+..+.-. ..+.-+..++++|++.- +..+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~---------~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF---------CPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS---------SCEEEECTTSCEEEECSSSTTCE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc---------cccccCCCCCCEEEeCCCCCCce
Confidence 8999998532 2235666777777787776665443211 11122346888888864 2334
Q ss_pred eEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEcc--Cc-----eEeeecCceeeeeec
Q 043502 684 LQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR--NG-----RLYQYNKVTELWHEH 742 (949)
Q Consensus 684 lq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~--NG-----rLYEwNg~TW~WhdH 742 (949)
+-+ ....-+|......|...-..+ ..++.+++|||.|. +| .++.|+-.+..|..-
T Consensus 268 ~~y--d~~t~~W~~~~~~~~~R~~~s--~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 268 SLY--DSSSDSWIPGPDMQVARGYQS--SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp EEE--EGGGTEEEECCCCSSCCSSCE--EEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred EEe--cCcCCceeECCCCCccccccc--eEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 333 344446766654444332111 23443567888775 33 255588888888764
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=74.37 E-value=79 Score=32.11 Aligned_cols=98 Identities=8% Similarity=-0.021 Sum_probs=50.7
Q ss_pred cCeEEEEcc-CceEeeecCceeeee-----ecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeE
Q 043502 717 ENIVFVVGR-NGRLYQYNKVTELWH-----EHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWN 790 (949)
Q Consensus 717 ~~~iFvvG~-NGrLYEwNg~TW~Wh-----dHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~ 790 (949)
++.+++.+. ||.++-|+-.+..-. .|..+ + . ..+..|. +..++..+.||.++ .|+..++=.
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~---v-~---~~~~s~~----g~~l~~~~~dg~i~--iw~~~~~~~ 522 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAK---P-S---YISISPS----ETYIAAGDVMGKIL--LYDLQSREV 522 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSC---E-E---EEEECTT----SSEEEEEETTSCEE--EEETTTTEE
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCc---e-E---EEEECCC----CCEEEEcCCCCeEE--EeeCCCCcc
Confidence 667777777 999888777664432 22221 1 1 1333332 23455666778774 466544332
Q ss_pred Eee----cCCCCCCceeecCCCCc------ccCceEEEEecCCceEEEEEe
Q 043502 791 WVE----HGTPGKGVTLVGSPGPC------LHGNQLLLIGSDGKVYLRYMD 831 (949)
Q Consensus 791 WVd----HGtP~~gvtvv~spG~s------f~gsqLFviGSDG~LYeRywd 831 (949)
-.. |..+. +.+.=+|... -++..|+..+.||.++ .|+
T Consensus 523 ~~~~~~~h~~~v--~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~--iw~ 569 (615)
T 1pgu_A 523 KTSRWAFRTSKI--NAISWKPAEKGANEEEIEEDLVATGSLDTNIF--IYS 569 (615)
T ss_dssp EECCSCCCSSCE--EEEEECCCC------CCSCCEEEEEETTSCEE--EEE
T ss_pred eeEeecCCCCce--eEEEEcCccccccccccCCCEEEEEcCCCcEE--EEE
Confidence 211 55554 3333333100 0445666666788765 565
No 102
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=73.93 E-value=72 Score=31.49 Aligned_cols=141 Identities=9% Similarity=0.107 Sum_probs=63.8
Q ss_pred cCceEEEEeeCCeeEEEEecCCEEEEEecC-CC-----CCcccc-------ccccccceEEEeccCcEEEEEecCCCcee
Q 043502 574 GSRSFFLITDGGFTFEYLYAESVWLWLRHD-HS-----TPMRGV-------LGNYNGSLYMVDLYGSLLIRERSSNELAW 640 (949)
Q Consensus 574 ~~~s~fliTd~G~~fE~~~~~~~WlWl~H~-h~-----T~m~g~-------~g~~ngsLf~vd~~GsL~~R~~~g~~~~W 640 (949)
.++++++...+.. -++|++.+|+|=.-. .+ +...+. .=+-++.|++...+|++.+ |.-.
T Consensus 52 pDG~~las~s~d~--~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~l--Wd~~---- 123 (357)
T 4g56_B 52 RDGALLLAASSLS--SRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVEL--WEIL---- 123 (357)
T ss_dssp SSSCEEEEEECSS--SSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEE--C-------
T ss_pred CCCCEEEEEcCCC--CccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEE--eecc----
Confidence 4455555544332 288999999983211 11 111111 1114678888888998654 4211
Q ss_pred eeccCCCCCceeecC-CCCCCCCCc--ceeecccCcE-EEEecCCeEeEEEEeceee--eeecCCCCCCcceEEeecccc
Q 043502 641 INCTAMRKGRQVIGG-PPWDGITGK--AMKVTAEDAL-FFVSKNGRLLQFTVALRKF--KWKDCRHPLDTKVACIVDQEL 714 (949)
Q Consensus 641 ~n~t~mr~G~~V~~G-~pwdgipG~--~~~vt~~dkl-F~vt~~GrLlq~tva~rkw--kW~dhg~PPgTkIata~d~~~ 714 (949)
.|+.+..- .+..|-.+. .+.+..++++ ..++.||.+.-+-....+. +...|..+ -+.|+.. .
T Consensus 124 -------~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~-v~~v~~s----~ 191 (357)
T 4g56_B 124 -------EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE-VNCVAAC----P 191 (357)
T ss_dssp ------------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEEC----T
T ss_pred -------ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC-EEEEEEc----c
Confidence 11110000 000001111 2334455554 4456788775544433332 23334333 1112222 2
Q ss_pred cccCeEEEEccCceEeeecC
Q 043502 715 FRENIVFVVGRNGRLYQYNK 734 (949)
Q Consensus 715 ~r~~~iFvvG~NGrLYEwNg 734 (949)
-.+..+.+.+.||+++-|+-
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~ 211 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDT 211 (357)
T ss_dssp TCSSCEEEEETTSCEEECCT
T ss_pred CCCceeeeeccCCceEEEEC
Confidence 22345667888999888753
No 103
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=72.07 E-value=70 Score=30.49 Aligned_cols=20 Identities=5% Similarity=0.162 Sum_probs=15.1
Q ss_pred cceEEEEEcc-cceEEEEeec
Q 043502 386 KFFSLFLTTS-AGAVFEYQIP 405 (949)
Q Consensus 386 ~~~sLF~t~S-~G~Vyey~~~ 405 (949)
+|..||++.+ ++.|..|.+.
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEEC
Confidence 3456888776 7889999884
No 104
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=71.86 E-value=21 Score=34.44 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=15.2
Q ss_pred cceEEEEEc-ccceEEEEeec
Q 043502 386 KFFSLFLTT-SAGAVFEYQIP 405 (949)
Q Consensus 386 ~~~sLF~t~-S~G~Vyey~~~ 405 (949)
+|..||++. .++.|+.|.+.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEec
Confidence 345688887 58999999885
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=71.83 E-value=67 Score=30.21 Aligned_cols=150 Identities=6% Similarity=0.038 Sum_probs=65.8
Q ss_pred EEEEecCceEEEEeeCCeeEEEEecCCEEE--EEecCCCCCccccccccccc-eEEEeccCcEEEEEecCCCceeeeccC
Q 043502 569 LRVMHGSRSFFLITDGGFTFEYLYAESVWL--WLRHDHSTPMRGVLGNYNGS-LYMVDLYGSLLIRERSSNELAWINCTA 645 (949)
Q Consensus 569 ~rvmh~~~s~fliTd~G~~fE~~~~~~~Wl--Wl~H~h~T~m~g~~g~~ngs-Lf~vd~~GsL~~R~~~g~~~~W~n~t~ 645 (949)
+.+-..++.|+..+.||.++=+=..++.+. -.-.+|..++....=+-+|+ |+....+|++.+=.-....+.-.- .
T Consensus 14 ~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--~ 91 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL--V 91 (372)
T ss_dssp EEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE--E
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE--E
Confidence 333334444445557777665555555321 11123443333332223444 555677787766443332211110 0
Q ss_pred CCCCceeecCCCCCCCCCcceeecccC-cEEEEecCCeEeEEEEeceeeeee--cCCCCCCcceEEe-ecccccccCeEE
Q 043502 646 MRKGRQVIGGPPWDGITGKAMKVTAED-ALFFVSKNGRLLQFTVALRKFKWK--DCRHPLDTKVACI-VDQELFRENIVF 721 (949)
Q Consensus 646 mr~G~~V~~G~pwdgipG~~~~vt~~d-klF~vt~~GrLlq~tva~rkwkW~--dhg~PPgTkIata-~d~~~~r~~~iF 721 (949)
+..-. + +=..+....++ .+++++.+|.+.-+-+....-.+. ....+-...|..+ ..+ .++.++
T Consensus 92 ~~~~~----~------~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~ 158 (372)
T 1k8k_C 92 ILRIN----R------AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP---NSVLLA 158 (372)
T ss_dssp CCCCS----S------CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT---TSSEEE
T ss_pred eecCC----C------ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC---CCCEEE
Confidence 00000 0 11122333444 455667788876655544331110 0001112223221 112 345677
Q ss_pred EEccCceEeeec
Q 043502 722 VVGRNGRLYQYN 733 (949)
Q Consensus 722 vvG~NGrLYEwN 733 (949)
+.+.||.++-|+
T Consensus 159 ~~~~dg~i~~~d 170 (372)
T 1k8k_C 159 AGSCDFKCRIFS 170 (372)
T ss_dssp EEETTSCEEEEE
T ss_pred EEcCCCCEEEEE
Confidence 777899988776
No 106
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=70.91 E-value=73 Score=30.26 Aligned_cols=21 Identities=14% Similarity=0.241 Sum_probs=16.7
Q ss_pred CceEEEEccCCceeeeccCCc
Q 043502 283 PEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 283 ~~vVftiss~GdLYeYnr~tk 303 (949)
.+.+++.+.+|.++-||...+
T Consensus 120 ~~~l~~~~~dg~i~i~~~~~~ 140 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWNKTGA 140 (425)
T ss_dssp SSEEEEEETTSCEEEEETTSC
T ss_pred CCEEEEEeCCCeEEEEeCCCC
Confidence 357889999999999995444
No 107
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=70.56 E-value=58 Score=28.98 Aligned_cols=70 Identities=19% Similarity=0.130 Sum_probs=37.5
Q ss_pred eecceeecCCcEEEEEec----CCceeEee-ccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCC--ceeeeccC
Q 043502 229 IKSGVVSQDGERVYFCTK----NGLLLELS-EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTG--DLYEYDRI 301 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~k----nG~LLe~t-el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~G--dLYeYnr~ 301 (949)
|.+-..|.||++|+++.. ..+|..+. +-.+.+-..+..+ +..++=.. =-+.++|+.+.+| +||.+|..
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSP-DGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS----EEEEEECT-TSSEEEEEEEETTEEEEEEEETT
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC----ccceEECC-CCCEEEEEECCCCceEEEEEECC
Confidence 344567899999999983 45666554 2222222222211 22221000 0124666777777 78888766
Q ss_pred Cc
Q 043502 302 SK 303 (949)
Q Consensus 302 tk 303 (949)
+.
T Consensus 162 ~~ 163 (297)
T 2ojh_A 162 SG 163 (297)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=70.50 E-value=69 Score=29.77 Aligned_cols=217 Identities=13% Similarity=0.107 Sum_probs=100.5
Q ss_pred cCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCcccccc--ccccc-eEEEeccCcEEEEEecCCCceeeeccCCCCCc
Q 043502 574 GSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLG--NYNGS-LYMVDLYGSLLIRERSSNELAWINCTAMRKGR 650 (949)
Q Consensus 574 ~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g--~~ngs-Lf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~ 650 (949)
.++.|+..+.||.+.=+=...+.-.-+ .+|..++....= .-++. |+....+|++.+=.-......
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~----------- 164 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQI-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM----------- 164 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS-----------
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceee-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE-----------
Confidence 444555566677554332233333322 234444433332 33444 666677888665432211111
Q ss_pred eeecCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceE---EeecccccccCeEEEEccCc
Q 043502 651 QVIGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVA---CIVDQELFRENIVFVVGRNG 727 (949)
Q Consensus 651 ~V~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIa---ta~d~~~~r~~~iFvvG~NG 727 (949)
+.+..+. +-..+ ....+.+++++.+|.+.-+......-.+.....|....+. ...+. .+....+++.+.||
T Consensus 165 ~~~~~~~----~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg 238 (368)
T 3mmy_A 165 MVLQLPE----RCYCA-DVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDK-QNKPTGFALGSIEG 238 (368)
T ss_dssp EEEECSS----CEEEE-EEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECT-TSCEEEEEEEETTS
T ss_pred EEEecCC----CceEE-EecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccC-CCCCCeEEEecCCC
Confidence 1111100 11111 1235578888888888777765555555555444333332 22221 12223388899999
Q ss_pred eEeeecCc-------eeeeeecCCCCce--------eeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC---e
Q 043502 728 RLYQYNKV-------TELWHEHYQSQHL--------VLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG---W 789 (949)
Q Consensus 728 rLYEwNg~-------TW~WhdHGkP~~t--------~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g---W 789 (949)
+++-|+-. ......|...... .+. ..+..|. +..++..+.||.+ +.|+..++ -
T Consensus 239 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~sp~----~~~l~s~~~dg~i--~iwd~~~~~~~~ 309 (368)
T 3mmy_A 239 RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVN---GIAFHPV----HGTLATVGSDGRF--SFWDKDARTKLK 309 (368)
T ss_dssp EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEE---EEEECTT----TCCEEEEETTSCE--EEEETTTTEEEE
T ss_pred cEEEEecCCCCccccceeeeeeecccccccccccccceE---EEEEecC----CCEEEEEccCCeE--EEEECCCCcEEE
Confidence 76654322 2244444432110 111 1334432 2346666678876 46775543 2
Q ss_pred EEeecCCCCCCceeecCCCCcccCceEEEEecCC
Q 043502 790 NWVEHGTPGKGVTLVGSPGPCLHGNQLLLIGSDG 823 (949)
Q Consensus 790 ~WVdHGtP~~gvtvv~spG~sf~gsqLFviGSDG 823 (949)
....|..|.. .+.=+| ++..|.+.++||
T Consensus 310 ~~~~~~~~v~--~~~~s~----~g~~l~~~s~d~ 337 (368)
T 3mmy_A 310 TSEQLDQPIS--ACCFNH----NGNIFAYASSYD 337 (368)
T ss_dssp ECCCCSSCEE--EEEECT----TSSCEEEEECCC
T ss_pred EecCCCCCce--EEEECC----CCCeEEEEeccc
Confidence 2334544432 222222 345566666666
No 109
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=70.47 E-value=89 Score=31.03 Aligned_cols=225 Identities=16% Similarity=0.143 Sum_probs=108.2
Q ss_pred eEEEecccCchheeecc---c-eeEEEccCCCccccCCeEEEEEE---e-ceeeehhccCceEEEecCCCCcceE-----
Q 043502 140 SIWVTGVSGSVYERFWN---G-VQWVIAPHDLPISAGPAISVFIV---N-QRILALAEAGVLYQMQLGDNSQPIW----- 206 (949)
Q Consensus 140 siwvtgesgsiyerfwn---g-~~wviaphdlp~s~g~ai~vfiv---n-~tilalseag~lyqmql~e~sqpiw----- 206 (949)
.+-..+..|.| +.|+ | ....+..|+-+|. ++-+. + ..|++-+..|.++-..+.......-
T Consensus 175 ~l~s~s~dg~i--~vwd~~~~~~~~~~~~h~~~v~-----~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~ 247 (464)
T 3v7d_B 175 ILVSGSTDRTV--RVWDIKKGCCTHVFEGHNSTVR-----CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 247 (464)
T ss_dssp EEEEEETTSCE--EEEETTTTEEEEEECCCSSCEE-----EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------C
T ss_pred EEEEEeCCCCE--EEEECCCCcEEEEECCCCCccE-----EEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccC
Confidence 34445566666 3564 2 3344555654443 33333 2 5677888889887766654332111
Q ss_pred ----EEeecccccccc-ccccccceeEeecceeecCCcEEEEEecCCceeEeeccCCCc--cccCCCCCCCceeEEeecc
Q 043502 207 ----VEFIPAIDQSIN-GEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELSEVEPPR--WLNHGRPPGANVAAIADAG 279 (949)
Q Consensus 207 ----~ef~~~~~~~~~-~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~tel~p~r--W~~hg~PPga~VA~I~D~~ 279 (949)
+-+.|..+.... ........+ . -++.||..|+.+..+|.+.-+. ++..+ ..-.+ ....|..++=..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~v--~--~~~~~~~~l~~~~~d~~i~vwd-~~~~~~~~~~~~--~~~~v~~~~~~~ 320 (464)
T 3v7d_B 248 DYPLVFHTPEENPYFVGVLRGHMASV--R--TVSGHGNIVVSGSYDNTLIVWD-VAQMKCLYILSG--HTDRIYSTIYDH 320 (464)
T ss_dssp CSSEEESCGGGCTTEEEEECCCSSCE--E--EEEEETTEEEEEETTSCEEEEE-TTTTEEEEEECC--CSSCEEEEEEET
T ss_pred CcceEeeccCCCeEEEEEccCccceE--E--EEcCCCCEEEEEeCCCeEEEEE-CCCCcEEEEecC--CCCCEEEEEEcC
Confidence 111111100000 000001111 1 2478899999999888765443 22111 11111 122233332111
Q ss_pred ccCCceEEEEccCCceeeeccCCchhhhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccce
Q 043502 280 NVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKW 359 (949)
Q Consensus 280 ~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkW 359 (949)
..+.+++.+.+|.++-||-.+.-.= +....|. ....++ ...+ --|+.-+.||.+.=+.+....=
T Consensus 321 --~~~~l~sg~~dg~i~vwd~~~~~~~--~~~~~h~----~~v~~~-----~~~~---~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 321 --ERKRCISASMDTTIRIWDLENGELM--YTLQGHT----ALVGLL-----RLSD---KFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp --TTTEEEEEETTSCEEEEETTTTEEE--EEECCCS----SCEEEE-----EECS---SEEEEEETTSEEEEEETTTCCE
T ss_pred --CCCEEEEEeCCCcEEEEECCCCcEE--EEEeCCC----CcEEEE-----EEcC---CEEEEEeCCCcEEEEECCCCce
Confidence 2357899999999999997654110 1111121 111111 1112 1345556788887777764443
Q ss_pred eEEEc-CCCCCCcccccceeccCCccccceEEEEEcccceEEEEeec
Q 043502 360 KWIIH-GSPEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQIP 405 (949)
Q Consensus 360 kWi~H-GtP~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~~~ 405 (949)
....| +.+. . +... .+ + .+++++++||.|+.|.+.
T Consensus 385 ~~~~~~~~~~----~-~~~~-~~----~-~~~l~~~~dg~i~iwd~~ 420 (464)
T 3v7d_B 385 KFSYHHTNLS----A-ITTF-YV----S-DNILVSGSENQFNIYNLR 420 (464)
T ss_dssp EEEEECTTCC----C-EEEE-EE----C-SSEEEEEETTEEEEEETT
T ss_pred eeeecCCCCc----c-EEEE-Ee----C-CCEEEEecCCeEEEEECC
Confidence 44333 2221 1 1111 11 1 237888899999999883
No 110
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=70.34 E-value=1.3e+02 Score=33.01 Aligned_cols=134 Identities=14% Similarity=0.262 Sum_probs=69.6
Q ss_pred EEEEEecCCceeEee--ccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhcccccccc
Q 043502 240 RVYFCTKNGLLLELS--EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAA 317 (949)
Q Consensus 240 ~lff~~knG~LLe~t--el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~ 317 (949)
.|+|.|.+| |..+. ..+++ ......++..|-+|+.. +.+.+++-..+| ||.||..++ ..+. +..
T Consensus 34 ~lWigT~~G-L~ryDG~~~~~~--~~~~~~~~~~i~~i~~d---~~g~lWigT~~G-l~~yd~~~~-~f~~----~~~-- 99 (758)
T 3ott_A 34 LIWIGSNKG-LFSYDGYSTQQH--FTYGENNNTRIYCGVII---DNTYLYMGTDNG-ILVYNYRAD-RYEQ----PET-- 99 (758)
T ss_dssp CEEEEESSC-EEEECSSCEEEC--SCTTSTTSSCEEEEEEE---TTTEEEEEETTE-EEEEETTTT-EECC----CSC--
T ss_pred CEEEEECCC-ccccCCCceEEE--EccCCCCCceEEEEEEc---CCCcEEEEeCCC-eEEEeCCCC-EEEC----ccc--
Confidence 688888887 45554 22221 12234456667776532 246677666655 999999887 3332 100
Q ss_pred ccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccceeEEE---cCCCCCCcccccceeccCCccccceEEEEEc
Q 043502 318 NASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKWKWII---HGSPEDTHLTSITPVQQDESNEKFFSLFLTT 394 (949)
Q Consensus 318 ~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkWkWi~---HGtP~~~~l~siT~v~~d~~~~~~~sLF~t~ 394 (949)
.......+ +.- ....|++.|.+ +|.-|.....+.+-+. .+.|. ..|..+.+|.. -.|++.|
T Consensus 100 --~~~~~i~~-i~~----~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~----~~i~~i~~d~~----g~lWigt 163 (758)
T 3ott_A 100 --DFPTDVRT-MAL----QGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPN----NTIYSIIRTKD----NQIYVGT 163 (758)
T ss_dssp --CCCSCEEE-EEE----ETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSC----SCEEEEEECTT----CCEEEEE
T ss_pred --CCCceEEE-EEe----cCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCC----CeEEEEEEcCC----CCEEEEe
Confidence 00111111 111 12378888876 6765554445554441 23343 23555555532 3477766
Q ss_pred ccceEEEEee
Q 043502 395 SAGAVFEYQI 404 (949)
Q Consensus 395 S~G~Vyey~~ 404 (949)
..| +|.|..
T Consensus 164 ~~G-l~~~~~ 172 (758)
T 3ott_A 164 YNG-LCRYIP 172 (758)
T ss_dssp TTE-EEEEET
T ss_pred CCC-HhhCcc
Confidence 554 666643
No 111
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=67.84 E-value=88 Score=29.96 Aligned_cols=27 Identities=0% Similarity=-0.066 Sum_probs=16.4
Q ss_pred eecccCcEEEEecCCeEeEEEEeceeee
Q 043502 667 KVTAEDALFFVSKNGRLLQFTVALRKFK 694 (949)
Q Consensus 667 ~vt~~dklF~vt~~GrLlq~tva~rkwk 694 (949)
.+..++++++.+ +.+|+.+-....+++
T Consensus 60 ~~~~dG~l~v~~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 60 ALRQSGGYVATI-GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEBTTSSEEEEE-TTEEEEEETTTTEEE
T ss_pred EECCCCCEEEEE-CCeEEEEECCCCcEE
Confidence 345677776666 556776665555544
No 112
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=66.56 E-value=92 Score=29.84 Aligned_cols=225 Identities=15% Similarity=0.222 Sum_probs=0.0
Q ss_pred CchheeeccceeEEEccCCCccccCC-eEEEEEEeceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccce
Q 043502 148 GSVYERFWNGVQWVIAPHDLPISAGP-AISVFIVNQRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSV 226 (949)
Q Consensus 148 gsiyerfwng~~wviaphdlp~s~g~-ai~vfivn~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~ 226 (949)
|.-.|+...|..|.=.|.=.| .|. .+.+=+-|.+|..+...|.+-+.......
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~--~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~------------------------ 87 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWE--AQRTLVWSDLVGRRVLGWREDGTVDVLLDATAF------------------------ 87 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEG--GGTEEEEEETTTTEEEEEETTSCEEEEEESCSC------------------------
T ss_pred CCceEEEecCCcCccCCeEeC--CCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCc------------------------
Q ss_pred eEeecceeecCCcEEEEEecCCceeEeeccCCCccccCCCCCCCceeEEeeccccCCceEEEEcc---------------
Q 043502 227 IQIKSGVVSQDGERVYFCTKNGLLLELSEVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISS--------------- 291 (949)
Q Consensus 227 ~~ik~gvvs~dg~~lff~~knG~LLe~tel~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss--------------- 291 (949)
+..=.++.||+ ||+|+..++-|...+...-.=.-....++.....+-|...-+.+-+|+...
T Consensus 88 --~~gl~~d~dG~-l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~ 164 (305)
T 3dr2_A 88 --TNGNAVDAQQR-LVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADP 164 (305)
T ss_dssp --EEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCC
T ss_pred --cceeeECCCCC-EEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccc
Q ss_pred ---CCceeeeccCCchhhhhhccccccccccccccCcccccccccCC-----ceeeEEEEecCCcEEEEEee--------
Q 043502 292 ---TGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGD-----HSTSLFLLTKGGNLVERRIQ-------- 355 (949)
Q Consensus 292 ---~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~-----~S~SLFlltk~G~LVErr~~-------- 355 (949)
.+.||.||..+. ...... ...........+.-..-...-+.. ..+..|=+..+| |-+.+.-
T Consensus 165 ~~~~~~v~~~d~~~g-~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~p 241 (305)
T 3dr2_A 165 ELAHHSVYRLPPDGS-PLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLP 241 (305)
T ss_dssp SSSCEEEEEECSSSC-CCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCC
T ss_pred ccCCCeEEEEcCCCC-cEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCC
Q ss_pred ------ccceeEEEcC------CCCCCcccccceeccCCccc---cceEEEEEcccceEEEEeec
Q 043502 356 ------QRKWKWIIHG------SPEDTHLTSITPVQQDESNE---KFFSLFLTTSAGAVFEYQIP 405 (949)
Q Consensus 356 ------qrkWkWi~HG------tP~~~~l~siT~v~~d~~~~---~~~sLF~t~S~G~Vyey~~~ 405 (949)
.++-=|+-.+ .|....+..+..-..+..+. ++..||++++ +.+|.++++
T Consensus 242 dgi~~d~~G~lwv~~~~gv~~~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~-~~l~~~~~~ 305 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGG-PCLWMLPLP 305 (305)
T ss_dssp CSEEECTTSCEEECCSSEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEEEET-TEEEEEECC
T ss_pred CeEEECCCCCEEEecCCcEEEECCCCCEEEEEECCCceeEEEEeCCCCEEEEEcC-CeEEEEECC
No 113
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=66.42 E-value=1.4e+02 Score=31.87 Aligned_cols=220 Identities=10% Similarity=-0.065 Sum_probs=101.7
Q ss_pred CceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccc-eEEEeccCcEEEEEecCCCceeeeccCCCCCceee
Q 043502 575 SRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGS-LYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVI 653 (949)
Q Consensus 575 ~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngs-Lf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~ 653 (949)
++.+...+.||.+.=+-...+.-+-.-.+|+.++....=+-+|+ |...+.+|++.+=......... .+
T Consensus 25 ~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~-----------~~ 93 (814)
T 3mkq_A 25 EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV-----------DF 93 (814)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE-----------EE
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE-----------EE
Confidence 34455555677665443345554444445665554443334454 5666677876654433222111 11
Q ss_pred cCCCCCCCCCc--ceeecccC-cEEEEecCCeEeEEEEece---eeeeecCCCCCCcceEEeecccccccCeEEEEccCc
Q 043502 654 GGPPWDGITGK--AMKVTAED-ALFFVSKNGRLLQFTVALR---KFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNG 727 (949)
Q Consensus 654 ~G~pwdgipG~--~~~vt~~d-klF~vt~~GrLlq~tva~r---kwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NG 727 (949)
.+ -++. .+....++ .+.+++.||.+.-+-+... ..+...|..| =+.++.. + -.++.+++.+.||
T Consensus 94 ~~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~-v~~~~~~--p--~~~~~l~~~~~dg 163 (814)
T 3mkq_A 94 EA-----HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF-VMCVAFN--P--KDPSTFASGCLDR 163 (814)
T ss_dssp EC-----CSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSC-EEEEEEE--T--TEEEEEEEEETTS
T ss_pred ec-----CCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCc-EEEEEEE--c--CCCCEEEEEeCCC
Confidence 11 1222 22334454 4667778888766555332 1233344333 1112221 1 1345777888899
Q ss_pred eEeeecCce--e--eeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCC---eEEeecCCCCCC
Q 043502 728 RLYQYNKVT--E--LWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDG---WNWVEHGTPGKG 800 (949)
Q Consensus 728 rLYEwNg~T--W--~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~g---W~WVdHGtP~~g 800 (949)
.++-|+-.+ . ....|...+-. ..+..|. .-+..++..+.||.+. .|+..++ .....|..+.
T Consensus 164 ~v~vwd~~~~~~~~~~~~~~~~~v~------~~~~~~~--~~~~~l~~~~~dg~i~--~~d~~~~~~~~~~~~~~~~v-- 231 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTTGQERGVN------YVDYYPL--PDKPYMITASDDLTIK--IWDYQTKSCVATLEGHMSNV-- 231 (814)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCCC------EEEECCS--TTCCEEEEECTTSEEE--EEETTTTEEEEEEECCSSCE--
T ss_pred eEEEEECCCCcceeEEecCCCCCEE------EEEEEEC--CCCCEEEEEeCCCEEE--EEECCCCcEEEEEcCCCCCE--
Confidence 988775321 1 12211111111 1222221 1123455556666553 4664332 2244465554
Q ss_pred ceeecCCCCcccCceEEEEecCCceEEEEEeCC
Q 043502 801 VTLVGSPGPCLHGNQLLLIGSDGKVYLRYMDQM 833 (949)
Q Consensus 801 vtvv~spG~sf~gsqLFviGSDG~LYeRywdg~ 833 (949)
..+.-+| .+..|++.+.||.++ .|+-.
T Consensus 232 ~~~~~~~----~~~~l~~~~~dg~v~--vwd~~ 258 (814)
T 3mkq_A 232 SFAVFHP----TLPIIISGSEDGTLK--IWNSS 258 (814)
T ss_dssp EEEEECS----SSSEEEEEETTSCEE--EEETT
T ss_pred EEEEEcC----CCCEEEEEeCCCeEE--EEECC
Confidence 2222222 345566666688864 57743
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=66.37 E-value=86 Score=29.34 Aligned_cols=146 Identities=9% Similarity=0.059 Sum_probs=67.8
Q ss_pred ecCceEEEEeeCCeeEEEEecCCEEEEEe--cCCCCCccccccc---cccceEEEeccCcEEEEEecCCCceeeeccCCC
Q 043502 573 HGSRSFFLITDGGFTFEYLYAESVWLWLR--HDHSTPMRGVLGN---YNGSLYMVDLYGSLLIRERSSNELAWINCTAMR 647 (949)
Q Consensus 573 h~~~s~fliTd~G~~fE~~~~~~~WlWl~--H~h~T~m~g~~g~---~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr 647 (949)
..++.|.....||.+.=+=..++.+.-++ .+|..++....=+ ....|+....||++.+=.-.... |...
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~---- 94 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQI---- 94 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE--EEEE----
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc--eeEe----
Confidence 34455555567887654444433443332 3444333322211 13456677788887664333322 1110
Q ss_pred CCceeecCCCCCCCCCcceeeccc---CcEEEEecCCeEeEEEEece----eeeeecCCCCCCcceEEeeccccc-----
Q 043502 648 KGRQVIGGPPWDGITGKAMKVTAE---DALFFVSKNGRLLQFTVALR----KFKWKDCRHPLDTKVACIVDQELF----- 715 (949)
Q Consensus 648 ~G~~V~~G~pwdgipG~~~~vt~~---dklF~vt~~GrLlq~tva~r----kwkW~dhg~PPgTkIata~d~~~~----- 715 (949)
+...+. =+ +=..+.+..+ ..+++++.||.+.-+-+... ......|..+ =+.++.. +...
T Consensus 95 ---~~~~~~-~~--~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~-v~~~~~~--~~~~~~~~~ 165 (379)
T 3jrp_A 95 ---AVHAVH-SA--SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-VNSASWA--PATIEEDGE 165 (379)
T ss_dssp ---EEECCC-SS--CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC-EEEEEEC--CCC------
T ss_pred ---eeecCC-Cc--ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc-eEEEEEc--Ccccccccc
Confidence 011110 00 1112233333 35777788888766554322 2333344333 1122222 2110
Q ss_pred -----ccCeEEEEccCceEeeec
Q 043502 716 -----RENIVFVVGRNGRLYQYN 733 (949)
Q Consensus 716 -----r~~~iFvvG~NGrLYEwN 733 (949)
+++.+++.+.||.++-|+
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d 188 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWK 188 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEE
T ss_pred ccCCCCCCEEEEEeCCCeEEEEE
Confidence 466778888899988763
No 115
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=66.17 E-value=1.2e+02 Score=33.34 Aligned_cols=77 Identities=16% Similarity=0.167 Sum_probs=37.7
Q ss_pred cceeecCCcEEEEEecCC----ceeEeeccCCC--c-cccCCCCCCCceeEEeeccccCCceEEEEcc---CCceeeecc
Q 043502 231 SGVVSQDGERVYFCTKNG----LLLELSEVEPP--R-WLNHGRPPGANVAAIADAGNVRPEVVYTISS---TGDLYEYDR 300 (949)
Q Consensus 231 ~gvvs~dg~~lff~~knG----~LLe~tel~p~--r-W~~hg~PPga~VA~I~D~~~~R~~vVftiss---~GdLYeYnr 300 (949)
+-.+|.||+.|+|...++ +-|-+-.+... + ++.--.+.+.....+ + .--..++|.... +++||.+|-
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~--~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-D--GVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-E--EETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-e--ccCCEEEEEECCCCCCCEEEEEeC
Confidence 345799999999988655 12222222211 2 222222223333333 2 112234444332 677999997
Q ss_pred CCc-hhhhhhc
Q 043502 301 ISK-PSWRKHI 310 (949)
Q Consensus 301 ~tk-psW~kHi 310 (949)
.+. ..|+.-+
T Consensus 349 ~~~~~~~~~l~ 359 (741)
T 1yr2_A 349 SGSTPRFDTVV 359 (741)
T ss_dssp SSSSCEEEEEE
T ss_pred CCCccccEEEe
Confidence 652 1455443
No 116
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=65.74 E-value=25 Score=37.90 Aligned_cols=142 Identities=16% Similarity=0.262 Sum_probs=76.0
Q ss_pred ccceEEEeccCcEEEEEecCCCceeeeccCCCCCceeecCCCCCCCCCcceeecccCcEEEEecC---CeEeEEEEecee
Q 043502 616 NGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKN---GRLLQFTVALRK 692 (949)
Q Consensus 616 ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~---GrLlq~tva~rk 692 (949)
.+-|++.|.+|.++-+--.|. +|.-.+|||-.+ +| ..+ |-.|++..+ .+|-=|......
T Consensus 49 ~~gL~Vydl~G~~l~~~~~g~----~nnVD~r~~~~l-~g--------~~~-----dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 49 KSGLVVYSLDGKMLHSYNTGK----LNNVDIRYDFPL-NG--------KKV-----DIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp TTEEEEEETTSCEEEEECCSC----EEEEEEEEEEEE-TT--------EEE-----EEEEEEECSTTCCEEEEEEECTTT
T ss_pred CCCEEEEcCCCcEEEEccCCC----cccEEEeccccc-CC--------ceE-----eEEEEeCCCCCCCeEEEEEECCCC
Confidence 367999999999987752221 455556664332 22 222 233444433 334334442222
Q ss_pred eeeecCCC---CCCcceEEeeccccccc---C--eEEEEccCceEeeecCceeeeeecCCCCceeee------cCCCcee
Q 043502 693 FKWKDCRH---PLDTKVACIVDQELFRE---N--IVFVVGRNGRLYQYNKVTELWHEHYQSQHLVLS------ILPGTAM 758 (949)
Q Consensus 693 wkW~dhg~---PPgTkIata~d~~~~r~---~--~iFvvG~NGrLYEwNg~TW~WhdHGkP~~t~ls------~~pGtAM 758 (949)
-++.+-+. |.+|.+..+.+-.+|++ + -+||.+++|++.||-=. ...-|+.+...+. ...||+.
T Consensus 111 ~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~---~~~~g~~~~~lVR~f~lgsq~Egcvv 187 (355)
T 3amr_A 111 GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELK---ADKNGYISGKKVRAFKMNSQTEGMAA 187 (355)
T ss_dssp CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEE---ECTTSCEEEEEEEEEECSSCEEEEEE
T ss_pred CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEE---eCCCCcccceEEEEecCCCCcceEEE
Confidence 24777766 44555544444446553 3 39999999998873211 0011111111111 2357777
Q ss_pred cCCCCCCcceEEEEecCCCeEEEE
Q 043502 759 RPPSASLTGSLFMLSEDGGLVEYH 782 (949)
Q Consensus 759 ~psk~sl~gslFm~~snG~LyEr~ 782 (949)
-+-. +.||+--+|-+++.+.
T Consensus 188 Dd~~----g~Lyv~eEd~GIw~~d 207 (355)
T 3amr_A 188 DDEY----GRLYIAEEDEAIWKFS 207 (355)
T ss_dssp ETTT----TEEEEEETTTEEEEEE
T ss_pred cCCC----CeEEEecccceEEEEe
Confidence 6543 6788888877776654
No 117
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=65.72 E-value=96 Score=29.65 Aligned_cols=71 Identities=11% Similarity=0.096 Sum_probs=40.8
Q ss_pred eecceeecCCcEEEEEecCCceeEee-c-cCCC-cccc---CCCCCCCceeEEeeccccCCceEEEEccC---Cceeeec
Q 043502 229 IKSGVVSQDGERVYFCTKNGLLLELS-E-VEPP-RWLN---HGRPPGANVAAIADAGNVRPEVVYTISST---GDLYEYD 299 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~knG~LLe~t-e-l~p~-rW~~---hg~PPga~VA~I~D~~~~R~~vVftiss~---GdLYeYn 299 (949)
|.+=.++.|| .|+.+..+|.+.-+. . -++. +... | .+....|-+|+=.. -.+.+++.+.+ |.++-||
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h-~~~~~~i~~i~~~~--~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSM-INNSNSIRSVKFSP--QGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC----CCCCCEEEEEECS--STTEEEEEEEETTEEEEEEEE
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccc-cccCCccceEEECC--CCCEEEEEecCCCCceEEEEE
Confidence 4444578888 888888888766554 1 1111 1222 2 11134444443111 14678888888 9999999
Q ss_pred cCCc
Q 043502 300 RISK 303 (949)
Q Consensus 300 r~tk 303 (949)
-.+.
T Consensus 265 ~~~~ 268 (397)
T 1sq9_A 265 TEFG 268 (397)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 7654
No 118
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=65.42 E-value=1.1e+02 Score=30.20 Aligned_cols=170 Identities=12% Similarity=0.222 Sum_probs=84.0
Q ss_pred ceeeeeeec-ceeEEEecccCchheeeccceeEEEccCCC-c----c--ccCC---eEE-EEEEeceeeehhccCceEE-
Q 043502 129 KRISLTKMS-ETSIWVTGVSGSVYERFWNGVQWVIAPHDL-P----I--SAGP---AIS-VFIVNQRILALAEAGVLYQ- 195 (949)
Q Consensus 129 krisltkms-etsiwvtgesgsiyerfwng~~wviaphdl-p----~--s~g~---ai~-vfivn~tilalseag~lyq- 195 (949)
+.|.=-+.| +.+.-+||-..++ |.|+|--|+.-.-+. | . ..+| ..+ .|.=+..+|+-+..|.+.-
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~--~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lW 120 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSS--RTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELW 120 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSS--SSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC
T ss_pred CCEEEEEECCCCCEEEEEcCCCC--ccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEe
Confidence 445444444 3456677766654 899998888643221 1 1 1122 122 2444567888888886542
Q ss_pred -E-----------ecCCCCcceE-EEeeccccccccccc---------cccceeEe--------ecceeecCCcE-EEEE
Q 043502 196 -M-----------QLGDNSQPIW-VEFIPAIDQSINGEA---------EQRSVIQI--------KSGVVSQDGER-VYFC 244 (949)
Q Consensus 196 -m-----------ql~e~sqpiw-~ef~~~~~~~~~~~~---------~qs~~~~i--------k~gvvs~dg~~-lff~ 244 (949)
+ .+.+|..+|. +.|.|..+....+-. ...+.+.. .+=.++.|+.. +.-+
T Consensus 121 d~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~ 200 (357)
T 4g56_B 121 EILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSC 200 (357)
T ss_dssp --------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEE
T ss_pred eccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeee
Confidence 1 2335666776 458776443322111 11112211 11134677764 4456
Q ss_pred ecCCceeEeeccCC---CccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 245 TKNGLLLELSEVEP---PRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 245 ~knG~LLe~tel~p---~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
..+|.+.-. .++. ..-.. .......|-+|+=. --...++.+-+.+|.++-||-.+.
T Consensus 201 ~~dg~v~~w-d~~~~~~~~~~~-~~~~~~~v~~v~~s-p~~~~~la~g~~d~~i~~wd~~~~ 259 (357)
T 4g56_B 201 GEDGRILLW-DTRKPKPATRID-FCASDTIPTSVTWH-PEKDDTFACGDETGNVSLVNIKNP 259 (357)
T ss_dssp ETTSCEEEC-CTTSSSCBCBCC-CTTCCSCEEEEEEC-TTSTTEEEEEESSSCEEEEESSCG
T ss_pred ccCCceEEE-ECCCCceeeeee-eccccccccchhhh-hcccceEEEeecccceeEEECCCC
Confidence 667765433 2222 22111 11222334333310 012346666778999999997654
No 119
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=65.08 E-value=81 Score=30.28 Aligned_cols=18 Identities=22% Similarity=0.455 Sum_probs=13.0
Q ss_pred ecceeec-CCcEEEEEecC
Q 043502 230 KSGVVSQ-DGERVYFCTKN 247 (949)
Q Consensus 230 k~gvvs~-dg~~lff~~kn 247 (949)
..-.+|. ||++|.|+...
T Consensus 191 ~~~~~sp~dg~~l~~~~~~ 209 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEG 209 (388)
T ss_dssp EEEEEETTEEEEEEEEECS
T ss_pred cccEECCCCCCEEEEEEec
Confidence 3445788 88888887763
No 120
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=64.84 E-value=71 Score=35.02 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=24.8
Q ss_pred CCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 266 RPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 266 ~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
+|-|..||+-.+...+++. +.+|++|-||..+.
T Consensus 70 Spdg~~l~~~~~~~~~~r~-----~~~~~~~~~d~~~~ 102 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRH-----SYTASYDIYDLNKR 102 (740)
T ss_dssp CTTSSEEEEEEEEEECSSS-----CEEEEEEEEETTTT
T ss_pred CCCCCEEEEEECCeeeEEE-----ccceEEEEEECCCC
Confidence 7888888888876555432 56788999998876
No 121
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=64.68 E-value=1.3e+02 Score=30.70 Aligned_cols=230 Identities=14% Similarity=0.126 Sum_probs=0.0
Q ss_pred EEecCceEEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccc-cccceEEEeccCcEEEEEecCCCceeee-------
Q 043502 571 VMHGSRSFFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGN-YNGSLYMVDLYGSLLIRERSSNELAWIN------- 642 (949)
Q Consensus 571 vmh~~~s~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~-~ngsLf~vd~~GsL~~R~~~g~~~~W~n------- 642 (949)
..+.+++.++...+..+...+..++.-+-.-.+|..++.+..=+ -...|+....+|++.+-..++..+.-+.
T Consensus 269 ~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~ 348 (577)
T 2ymu_A 269 AFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW 348 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE
Q ss_pred -ccCCCCCceeecCCCCCCCCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccc-----
Q 043502 643 -CTAMRKGRQVIGGPPWDGITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFR----- 716 (949)
Q Consensus 643 -~t~mr~G~~V~~G~pwdgipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r----- 716 (949)
+.-.+.|+.++.| ..+..+.+-+.+|++++..-.-....-.=.=.|.|..++++-..-.++
T Consensus 349 ~~~~s~~g~~l~~~-------------~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~ 415 (577)
T 2ymu_A 349 GVAFSPDGQTIASA-------------SDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 415 (577)
T ss_dssp EEEECTTSSEEEEE-------------ETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EEEECCCCCEEEEE-------------eCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC
Q ss_pred ----------------------cCeEEEEccCceEeeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEec
Q 043502 717 ----------------------ENIVFVVGRNGRLYQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSE 774 (949)
Q Consensus 717 ----------------------~~~iFvvG~NGrLYEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~s 774 (949)
++.+.+.+.||.++-|+.....-..--.....+.. .+..|.. ..+...+.
T Consensus 416 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~----~~~spd~----~~las~~~ 487 (577)
T 2ymu_A 416 GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRG----VAFSPDG----QTIASASD 487 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEE----EEECTTS----CEEEEEET
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEE----EEEcCCC----CEEEEEeC
Q ss_pred CCCeEEEEEeCCCCeEEeecCCCCCCceeecCCCCcccCceEEEEecCCceEE
Q 043502 775 DGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCLHGNQLLLIGSDGKVYL 827 (949)
Q Consensus 775 nG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf~gsqLFviGSDG~LYe 827 (949)
||.+.-.--+..--.....|..+. +.+.=+| ++..|+..+.||.++.
T Consensus 488 d~~i~iw~~~~~~~~~~~~h~~~v--~~l~~s~----dg~~l~s~~~dg~v~l 534 (577)
T 2ymu_A 488 DKTVKLWNRNGQLLQTLTGHSSSV--RGVAFSP----DGQTIASASDDKTVKL 534 (577)
T ss_dssp TSEEEEEETTSCEEEEEECCSSCE--EEEEECT----TSSCEEEEETTSEEEE
T ss_pred CCEEEEEcCCCCEEEEEeCCCCCE--EEEEEcC----CCCEEEEEECcCEEEE
No 122
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=64.61 E-value=91 Score=29.01 Aligned_cols=147 Identities=11% Similarity=-0.021 Sum_probs=80.8
Q ss_pred ceeEEEecccCchheeecc----ceeEEEccCCCccccCCeEEEEEEec------eeeehhccCceEEEecCCCCcceEE
Q 043502 138 ETSIWVTGVSGSVYERFWN----GVQWVIAPHDLPISAGPAISVFIVNQ------RILALAEAGVLYQMQLGDNSQPIWV 207 (949)
Q Consensus 138 etsiwvtgesgsiyerfwn----g~~wviaphdlp~s~g~ai~vfivn~------tilalseag~lyqmql~e~sqpiw~ 207 (949)
+.-+.+++.+|.| +.|+ ...-.+..|.-|...+...++-+... .|++-++.|.++-..+.. .+++..
T Consensus 34 ~~~~~~~~~~~~v--~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~ 110 (366)
T 3k26_A 34 DPLVFATVGSNRV--TLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT-MQCIKH 110 (366)
T ss_dssp SCEEEEEEETTEE--EEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT-CCEEEE
T ss_pred CceEEEECCCCEE--EEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh-ceEeee
Confidence 4457777878854 3554 33456667766655555555544433 466677888877666543 233322
Q ss_pred EeeccccccccccccccceeEeecceeec-CCcEEEEEecCCceeEee-c-cCCCccccCCCCCCCceeEEeeccccCCc
Q 043502 208 EFIPAIDQSINGEAEQRSVIQIKSGVVSQ-DGERVYFCTKNGLLLELS-E-VEPPRWLNHGRPPGANVAAIADAGNVRPE 284 (949)
Q Consensus 208 ef~~~~~~~~~~~~~qs~~~~ik~gvvs~-dg~~lff~~knG~LLe~t-e-l~p~rW~~hg~PPga~VA~I~D~~~~R~~ 284 (949)
|... .-.|..=..+. ||..|+.+..+|.+.-.. . -++.+-...-......|.+|+=.. ..+
T Consensus 111 -~~~~-------------~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~ 174 (366)
T 3k26_A 111 -YVGH-------------GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL--LGE 174 (366)
T ss_dssp -EESC-------------CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT--TSS
T ss_pred -ecCC-------------CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC--CCC
Confidence 1100 01122333455 788888888888765544 1 111111100012233444443111 246
Q ss_pred eEEEEccCCceeeeccCCc
Q 043502 285 VVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 285 vVftiss~GdLYeYnr~tk 303 (949)
.+++.+.+|.++-||-.+.
T Consensus 175 ~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 175 KIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp EEEEEETTSCEEEEESCSH
T ss_pred EEEEecCCCCEEEEECCCC
Confidence 7899999999999998775
No 123
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=64.50 E-value=91 Score=28.96 Aligned_cols=61 Identities=7% Similarity=0.093 Sum_probs=32.6
Q ss_pred ecccCc-EEEEecCCeEeEEEEec-ee--eeeecCCCCCCcceE-EeecccccccCeEEEEccCceEeeecCc
Q 043502 668 VTAEDA-LFFVSKNGRLLQFTVAL-RK--FKWKDCRHPLDTKVA-CIVDQELFRENIVFVVGRNGRLYQYNKV 735 (949)
Q Consensus 668 vt~~dk-lF~vt~~GrLlq~tva~-rk--wkW~dhg~PPgTkIa-ta~d~~~~r~~~iFvvG~NGrLYEwNg~ 735 (949)
+..+++ +++++.+|.+.-+-... .+ .+...|..+ |. .+..+ +++.+++.+.||.++-|+-.
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----v~~~~~~~---~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS----ISDMQFSP---DLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC----EEEEEECT---TSSEEEEEETTSEEEEEETT
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc----eeEEEECC---CCCEEEEecCCceEEEEECC
Confidence 344443 55567788876555432 12 223333332 32 22222 45567778889998886643
No 124
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=64.07 E-value=1.1e+02 Score=29.66 Aligned_cols=20 Identities=15% Similarity=0.082 Sum_probs=15.1
Q ss_pred cceEEEEEcccceEEEEeec
Q 043502 386 KFFSLFLTTSAGAVFEYQIP 405 (949)
Q Consensus 386 ~~~sLF~t~S~G~Vyey~~~ 405 (949)
++..|+..+.||.|+.|.+.
T Consensus 67 ~g~~l~~~~~d~~v~i~d~~ 86 (420)
T 3vl1_A 67 VGSHLYKARLDGHDFLFNTI 86 (420)
T ss_dssp EETTEEEEEETTEEEEEECC
T ss_pred cCCeEEEEEcCCcEEEEEec
Confidence 34567777889999988873
No 125
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=63.87 E-value=86 Score=28.45 Aligned_cols=67 Identities=12% Similarity=0.087 Sum_probs=35.8
Q ss_pred CCcEEEEEecCCceeEee-ccCC-----Cccc--cCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 237 DGERVYFCTKNGLLLELS-EVEP-----PRWL--NHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 237 dg~~lff~~knG~LLe~t-el~p-----~rW~--~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
||..|+.+..+|.+.-.. +-.. .+|+ ..-......|-.|+=...-..+.+++.+.+|.++-||-.+.
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 688888888888765443 1110 0000 00011223344443111111458999999999999996654
No 126
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=63.50 E-value=1e+02 Score=30.03 Aligned_cols=18 Identities=33% Similarity=0.536 Sum_probs=13.2
Q ss_pred cCeEEEEc--cCceEeeecC
Q 043502 717 ENIVFVVG--RNGRLYQYNK 734 (949)
Q Consensus 717 ~~~iFvvG--~NGrLYEwNg 734 (949)
++.+||.. .|++++.|+.
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp TCCEEEEECSSCCEEEEECT
T ss_pred CCeEEEEeCCCCCeEEEEcC
Confidence 56777777 3899988653
No 127
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=63.15 E-value=1.1e+02 Score=30.74 Aligned_cols=69 Identities=10% Similarity=0.067 Sum_probs=41.5
Q ss_pred cceeecCCcEEEEEecCCceeEee--ccCCC-----ccccCCCCCCCceeEEeeccc-cCCceEEEEccCCceeeeccCC
Q 043502 231 SGVVSQDGERVYFCTKNGLLLELS--EVEPP-----RWLNHGRPPGANVAAIADAGN-VRPEVVYTISSTGDLYEYDRIS 302 (949)
Q Consensus 231 ~gvvs~dg~~lff~~knG~LLe~t--el~p~-----rW~~hg~PPga~VA~I~D~~~-~R~~vVftiss~GdLYeYnr~t 302 (949)
+=..+.||..|+.++++|.+..+. ..+.. ....|. ..|-+|+=... -....+++.+.+|.++-||-.+
T Consensus 154 ~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 154 AISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHV----SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECS----SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeeccc----CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 334688999999999999987664 11111 122232 22333310000 0124889999999999999765
Q ss_pred c
Q 043502 303 K 303 (949)
Q Consensus 303 k 303 (949)
.
T Consensus 230 ~ 230 (450)
T 2vdu_B 230 C 230 (450)
T ss_dssp T
T ss_pred C
Confidence 4
No 128
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=61.63 E-value=1.1e+02 Score=28.82 Aligned_cols=187 Identities=10% Similarity=-0.018 Sum_probs=88.1
Q ss_pred EEEEecCceEEEEeeCCeeEEEEecCCEEEEEe--cCCCCCcccccccccc-ceEEEeccCcEEEEEecCCCceeeeccC
Q 043502 569 LRVMHGSRSFFLITDGGFTFEYLYAESVWLWLR--HDHSTPMRGVLGNYNG-SLYMVDLYGSLLIRERSSNELAWINCTA 645 (949)
Q Consensus 569 ~rvmh~~~s~fliTd~G~~fE~~~~~~~WlWl~--H~h~T~m~g~~g~~ng-sLf~vd~~GsL~~R~~~g~~~~W~n~t~ 645 (949)
+.....++.|+....||.+.-+=...+.+.-.. .+|..++....=+-+| .|++.+.+|++.+-......-.++-. .
T Consensus 58 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~-~ 136 (372)
T 1k8k_C 58 VDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCK-H 136 (372)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEE-E
T ss_pred EEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeee-e
Confidence 334444555666677787765544556554433 3344333332222234 46666778888775554443222111 1
Q ss_pred CCCCceeecCCCCCCCCCcceeecccCc-EEEEecCCeEeEEEEe--------------------ceeeeeecCCCCCCc
Q 043502 646 MRKGRQVIGGPPWDGITGKAMKVTAEDA-LFFVSKNGRLLQFTVA--------------------LRKFKWKDCRHPLDT 704 (949)
Q Consensus 646 mr~G~~V~~G~pwdgipG~~~~vt~~dk-lF~vt~~GrLlq~tva--------------------~rkwkW~dhg~PPgT 704 (949)
...+. . +.| ..+.+..++. ++.++.||.+.-+-.. ....++..|..+
T Consensus 137 ~~~~~---~----~~i--~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 204 (372)
T 1k8k_C 137 IKKPI---R----STV--LSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW--- 204 (372)
T ss_dssp ECTTC---C----SCE--EEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC---
T ss_pred eeccc---C----CCe--eEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe---
Confidence 11110 0 011 1223344554 4455678877554421 111222233222
Q ss_pred ceE-EeecccccccCeEEEEccCceEeeecCce----eeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeE
Q 043502 705 KVA-CIVDQELFRENIVFVVGRNGRLYQYNKVT----ELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLV 779 (949)
Q Consensus 705 kIa-ta~d~~~~r~~~iFvvG~NGrLYEwNg~T----W~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~Ly 779 (949)
|. .+..+ .++.+++.+.||.++-|+-.+ .....|..|... .+..| .+.++..+.||.++
T Consensus 205 -v~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~-------~~~~~-----~~~~l~~~~d~~i~ 268 (372)
T 1k8k_C 205 -VHGVCFSA---NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA-------VTFIT-----ESSLVAAGHDCFPV 268 (372)
T ss_dssp -EEEEEECS---SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEE-------EEEEE-----TTEEEEEETTSSCE
T ss_pred -EEEEEECC---CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEE-------EEEec-----CCCEEEEEeCCeEE
Confidence 21 11111 355788888999877755332 123333322111 23333 24577788899886
Q ss_pred EEEEe
Q 043502 780 EYHWN 784 (949)
Q Consensus 780 Er~Wn 784 (949)
=+-.+
T Consensus 269 i~~~~ 273 (372)
T 1k8k_C 269 LFTYD 273 (372)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 44333
No 129
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=61.12 E-value=1.2e+02 Score=29.21 Aligned_cols=103 Identities=15% Similarity=-0.026 Sum_probs=55.6
Q ss_pred ceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEeeccCCC--
Q 043502 182 QRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELSEVEPP-- 259 (949)
Q Consensus 182 ~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~tel~p~-- 259 (949)
+.|++-++.|.++-..+.. +.+- .+... +...-.|.+=.++.||..|+.+..+|.+.-+.--..+
T Consensus 132 ~~l~s~~~d~~i~iwd~~~--~~~~-~~~~~----------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 198 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG--SVIQ-VFAKT----------DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIF 198 (383)
T ss_dssp EEEEEEETTTEEEEEETTS--CEEE-EEECC----------CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEE
T ss_pred CEEEEEeCCCEEEEEECCC--CceE-EEecc----------CCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEE
Confidence 4566667788877666653 2211 11110 0001123444567899999999888877655410111
Q ss_pred ccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCC
Q 043502 260 RWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRIS 302 (949)
Q Consensus 260 rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~t 302 (949)
....|. ..|.+|+=.. -.+.++++.+.+|.++-||-.+
T Consensus 199 ~~~~h~----~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 199 KEKLHK----AKVTHAEFNP-RCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEECSS----SCEEEEEECS-SCTTEEEEEETTSEEEEEEGGG
T ss_pred EeccCC----CcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCC
Confidence 111222 2333332111 1223899999999999998876
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=60.82 E-value=1.2e+02 Score=30.74 Aligned_cols=67 Identities=25% Similarity=0.360 Sum_probs=35.8
Q ss_pred eecceeecCCcEEEEEecCC--ceeEeeccCCC---ccccCCCCCCCceeEEeeccccCC---ceEEEEccCCc--eeee
Q 043502 229 IKSGVVSQDGERVYFCTKNG--LLLELSEVEPP---RWLNHGRPPGANVAAIADAGNVRP---EVVYTISSTGD--LYEY 298 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~knG--~LLe~tel~p~---rW~~hg~PPga~VA~I~D~~~~R~---~vVftiss~Gd--LYeY 298 (949)
+.+-..|.||++|+++..++ .-|.+-.++.- +-..+ ++ .|.+++ |-| .++|+.+.+|+ ||-|
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~---~~-~~~~~~----~spdg~~la~~~~~~g~~~i~~~ 252 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF---PR-HNGAPA----FSPDGSKLAFALSKTGSLNLYVM 252 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC---SS-CEEEEE----ECTTSSEEEEEECTTSSCEEEEE
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC---CC-cccCEE----EcCCCCEEEEEEecCCCceEEEE
Confidence 44456789999999988765 22223222211 11222 11 222221 111 36667776665 9999
Q ss_pred ccCCc
Q 043502 299 DRISK 303 (949)
Q Consensus 299 nr~tk 303 (949)
|-.+.
T Consensus 253 d~~~~ 257 (415)
T 2hqs_A 253 DLASG 257 (415)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 98776
No 131
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=59.68 E-value=2.3e+02 Score=31.94 Aligned_cols=112 Identities=14% Similarity=0.213 Sum_probs=59.6
Q ss_pred CeEEEEccCc--eEee--ecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEe----------cCCCeEEEEE
Q 043502 718 NIVFVVGRNG--RLYQ--YNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLS----------EDGGLVEYHW 783 (949)
Q Consensus 718 ~~iFvvG~NG--rLYE--wNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~----------snG~LyEr~W 783 (949)
++||+...++ .||. +.|.||.=+. +.|.+..... .++.| ...+|+.. .+|.|| |+=
T Consensus 211 ~~v~~~~~~~~~~v~~S~DgG~tW~~~~-~~p~~~~~~~---~~~~~-----~~~l~~~~~d~~g~y~~~~~g~v~-~s~ 280 (737)
T 2cn3_A 211 KTIYVGVADKNESIYRSTDGGVTWKAVP-GQPKGLLPHH---GVLAS-----NGMLYITYGDTCGPYDGNGKGQVW-KFN 280 (737)
T ss_dssp SCEEEEESCSSCCEEEESSTTSCCEECT-TCCCSSEEEE---EEECT-----TSEEEEEEESSCCSSCCSCCEEEE-EEE
T ss_pred CEEEEEecCCCccEEEEcCCCCceEECC-CCCCcccceE---EEECC-----CCeEEEEecCCCCccccccCceEE-EEe
Confidence 4788876554 5999 7778876655 6665442211 12222 45677764 345666 455
Q ss_pred eCCCCeEEeecCCCCCC-------ceeecCCCCcccCceEEEEecC-----CceEEEEEeCCcce--eeecCCC
Q 043502 784 NTWDGWNWVEHGTPGKG-------VTLVGSPGPCLHGNQLLLIGSD-----GKVYLRYMDQMTWR--WKNCGFP 843 (949)
Q Consensus 784 ntg~gW~WVdHGtP~~g-------vtvv~spG~sf~gsqLFviGSD-----G~LYeRywdg~tWt--W~NhG~P 843 (949)
+.+..|.=+.- .|..+ ..+.-.|. ..+.|++.+.+ +.+|+-.=.|.+|+ |.+-|-|
T Consensus 281 d~G~tW~~i~~-~~~~~~~~~~~~~~i~v~p~---~~~~ly~~~~~~~~~~~~l~~S~DgG~tW~~~~~~~g~p 350 (737)
T 2cn3_A 281 TRTGEWIDITP-IPYSSSDNRFCFAGLAVDRQ---NPDIIMVTSMNAWWPDEYIFRSTDGGATWKNIWEWGMYP 350 (737)
T ss_dssp TTTCCEEECCS-SCTTSTTCCSEEEEEEECTT---CTTCEEEEEECCCSSCCCEEEESSTTSSCEESEEECSTT
T ss_pred CCCCCEEEccC-CCCCCcccccccccEEEcCC---CCCEEEEEecccCCCCccEEEeCCCCccccchhhccCCC
Confidence 65666664432 23210 01211221 23577777765 56766533366887 4455555
No 132
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=58.70 E-value=1.3e+02 Score=28.88 Aligned_cols=24 Identities=8% Similarity=0.124 Sum_probs=17.1
Q ss_pred cceEEEEEc-ccceEEEEeeccCCC
Q 043502 386 KFFSLFLTT-SAGAVFEYQIPKYSG 409 (949)
Q Consensus 386 ~~~sLF~t~-S~G~Vyey~~~k~tg 409 (949)
+|..||+.. .++.|..|.++.-+|
T Consensus 316 dg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 316 NGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp TSCEEEEEETTTTEEEEEEECTTTC
T ss_pred CCCEEEEEECCCCCEEEEEEECCCC
Confidence 345688877 468899988865554
No 133
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=58.19 E-value=1.3e+02 Score=28.55 Aligned_cols=192 Identities=8% Similarity=0.023 Sum_probs=90.6
Q ss_pred eeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcE-EEEEecCCceeEeeccCC---
Q 043502 183 RILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGER-VYFCTKNGLLLELSEVEP--- 258 (949)
Q Consensus 183 tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~-lff~~knG~LLe~tel~p--- 258 (949)
.+++-+..|.++-..+... +++.. +.. ... .|.+=.+++||.. |+.+..+|.+.-+. ++.
T Consensus 158 ~~~~~~~~~~v~~~d~~~~-~~~~~-~~~----------~~~---~v~~~~~~~~~~~ll~~~~~dg~i~i~d-~~~~~~ 221 (408)
T 4a11_B 158 LVAVGTRGPKVQLCDLKSG-SCSHI-LQG----------HRQ---EILAVSWSPRYDYILATASADSRVKLWD-VRRASG 221 (408)
T ss_dssp EEEEEESSSSEEEEESSSS-CCCEE-ECC----------CCS---CEEEEEECSSCTTEEEEEETTSCEEEEE-TTCSSC
T ss_pred EEEEEcCCCeEEEEeCCCc-ceeee-ecC----------CCC---cEEEEEECCCCCcEEEEEcCCCcEEEEE-CCCCCc
Confidence 4566677777776666432 22211 110 001 2333446778885 55667777655443 211
Q ss_pred -Ccccc------------CCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhccccccccccccccCc
Q 043502 259 -PRWLN------------HGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSM 325 (949)
Q Consensus 259 -~rW~~------------hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~ 325 (949)
++-.+ ...+....|..|+=.. -.+.+++.+.+|.++-||-.+... ...+ ..+. .....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~-~~~~-~~~~-----~~~~~ 292 (408)
T 4a11_B 222 CLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS--DGLHLLTVGTDNRMRLWNSSNGEN-TLVN-YGKV-----CNNSK 292 (408)
T ss_dssp CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCB-CCCC-CCCC-----CCCCS
T ss_pred ccccccccccccceeeccccccccCceeEEEEcC--CCCEEEEecCCCeEEEEECCCCcc-ceec-cccc-----ccccc
Confidence 11110 0012233344443111 235789999999999999776511 0000 0000 00000
Q ss_pred ccccccccCCceeeEEEEecCCcEEEEEeeccceeEEEcCCCCCCcccccceeccCCccccceEEEEEcccceEEEEeec
Q 043502 326 ACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKWKWIIHGSPEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQIP 405 (949)
Q Consensus 326 g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkWkWi~HGtP~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~~~ 405 (949)
...........+..++..+.+|.+.=+.+...+-.....| +...++++. +. .++..|+..+.||.|+.|.+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~v~~~~--~s----~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 293 KGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG--HYKTVDCCV--FQ----SNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp SCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC--CSSCEEEEE--EE----TTTTEEEEEETTSCEEEEEEC
T ss_pred ccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc--CCCeEEEEE--Ec----CCCCEEEEECCCCeEEEEeCC
Confidence 0111111112233566667777776666553322222222 222334332 22 233557777779999999985
Q ss_pred cC
Q 043502 406 KY 407 (949)
Q Consensus 406 k~ 407 (949)
..
T Consensus 365 ~~ 366 (408)
T 4a11_B 365 LY 366 (408)
T ss_dssp C-
T ss_pred CC
Confidence 43
No 134
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=57.20 E-value=2.3e+02 Score=31.18 Aligned_cols=111 Identities=21% Similarity=0.294 Sum_probs=51.9
Q ss_pred ecccCcEEEEecCCeEeEEEEeceeeeeecCCCCC-----CcceEEe-ecccccccCeEEEEccCceEeeecCceeeeee
Q 043502 668 VTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPL-----DTKVACI-VDQELFRENIVFVVGRNGRLYQYNKVTELWHE 741 (949)
Q Consensus 668 vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PP-----gTkIata-~d~~~~r~~~iFvvG~NGrLYEwNg~TW~Whd 741 (949)
...++.+++.|.+| |+.+.-...+++-. ..|. ...|.++ .|. .++.+++.+ ++-||.|+..+..+..
T Consensus 153 ~d~~g~lWigt~~G-l~~~~~~~~~~~~~--~~~~~~~~~~~~i~~i~~d~---~~~~lWigt-~~Gl~~~~~~~~~~~~ 225 (758)
T 3ott_A 153 RTKDNQIYVGTYNG-LCRYIPSNGKFEGI--PLPVHSSQSNLFVNSLLEDT---TRQCVWIGT-EGYLFQYFPSTGQIKQ 225 (758)
T ss_dssp ECTTCCEEEEETTE-EEEEETTTTEEEEE--CCCCCTTCSSCCEEEEEEET---TTTEEEEEE-EEEEEEEETTTTEEEE
T ss_pred EcCCCCEEEEeCCC-HhhCccCCCceEEe--cCCCccccccceeEEEEEEC---CCCEEEEEE-CCCCeEEcCCCCeEEe
Confidence 34577899998765 66544333344322 1221 2223322 111 234455544 4569998866554432
Q ss_pred cCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecC
Q 043502 742 HYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHG 795 (949)
Q Consensus 742 HGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHG 795 (949)
....++..+. +|. ..-.+.+.+.+ +++|+-+--. ...+....|.
T Consensus 226 ~~~l~~~~i~-----~i~---~d~~g~lWigT-~~Gl~~~~~~-~~~~~~~~~~ 269 (758)
T 3ott_A 226 TEAFHNNSIK-----SLA---LDGNGDLLAGT-DNGLYVYHND-TTPLQHIIHD 269 (758)
T ss_dssp EEEEEEEEEE-----EEE---ECTTCCEEEEE-TTEEEEECCT-TSCCEEECCC
T ss_pred ccCCCCCeEE-----EEE---EcCCCCEEEEe-CCceeEEecC-CCcEEEEEcC
Confidence 2111111111 122 12246677777 5678753222 2345555443
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=57.17 E-value=2.1e+02 Score=30.79 Aligned_cols=73 Identities=19% Similarity=0.248 Sum_probs=46.4
Q ss_pred ecceeec----CCcEEEEEec-CCceeEee--ccCCCccccC-CC-------CCCCceeEEeeccccCCceEEEEccCCc
Q 043502 230 KSGVVSQ----DGERVYFCTK-NGLLLELS--EVEPPRWLNH-GR-------PPGANVAAIADAGNVRPEVVYTISSTGD 294 (949)
Q Consensus 230 k~gvvs~----dg~~lff~~k-nG~LLe~t--el~p~rW~~h-g~-------PPga~VA~I~D~~~~R~~vVftiss~Gd 294 (949)
.+-.+|. ||++||..+. .+.+.-+. .+++.+=... +. .|+..|++|+.... .+.+++++..+|.
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~-~~~~~vs~~~~g~ 303 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE-HPEFIVNVKETGK 303 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS-SSEEEEEETTTTE
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC-CCEEEEEECCCCe
Confidence 3446788 9999999985 45554332 2222221111 11 24557888886543 3478889999999
Q ss_pred eeeeccCCc
Q 043502 295 LYEYDRISK 303 (949)
Q Consensus 295 LYeYnr~tk 303 (949)
+..+|-.+.
T Consensus 304 i~vvd~~~~ 312 (543)
T 1nir_A 304 VLLVNYKDI 312 (543)
T ss_dssp EEEEECTTS
T ss_pred EEEEEecCC
Confidence 999987653
No 136
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=56.36 E-value=2.4e+02 Score=31.20 Aligned_cols=147 Identities=9% Similarity=0.020 Sum_probs=67.1
Q ss_pred cCceEEEEeeCCeeEEEEecCCEEEEE--ecCCCCCcccccccc---ccceEEEeccCcEEEEEecCCCceeeeccCCCC
Q 043502 574 GSRSFFLITDGGFTFEYLYAESVWLWL--RHDHSTPMRGVLGNY---NGSLYMVDLYGSLLIRERSSNELAWINCTAMRK 648 (949)
Q Consensus 574 ~~~s~fliTd~G~~fE~~~~~~~WlWl--~H~h~T~m~g~~g~~---ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~ 648 (949)
.++.++....||.+.=+=..++.+.-+ -.+|..++....=+. ...|+....||++.+=.-.... |...
T Consensus 20 dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~--~~~~----- 92 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQI----- 92 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE--EEEE-----
T ss_pred CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc--cccc-----
Confidence 345566666788765444443344333 335544443332221 3356677777877664433321 1000
Q ss_pred CceeecCCCCCCCCCcceeecc---cCcEEEEecCCeEeEEEEece----eeeeecCCCCCCcceEEeeccc--------
Q 043502 649 GRQVIGGPPWDGITGKAMKVTA---EDALFFVSKNGRLLQFTVALR----KFKWKDCRHPLDTKVACIVDQE-------- 713 (949)
Q Consensus 649 G~~V~~G~pwdgipG~~~~vt~---~dklF~vt~~GrLlq~tva~r----kwkW~dhg~PPgTkIata~d~~-------- 713 (949)
....+. =+ +=..+.+.. ...+++++.||.+.-+-+... ......|..+ =+.|+..+...
T Consensus 93 --~~~~~h-~~--~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~-v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 93 --AVHAVH-SA--SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp --EEECCC-SS--CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC-EEEEEECCCC---------
T ss_pred --ccccCC-CC--CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc-eEEEEecCccccccccccc
Confidence 011110 00 111122333 245777788888766554322 2233333322 12222221100
Q ss_pred ccccCeEEEEccCceEeeec
Q 043502 714 LFRENIVFVVGRNGRLYQYN 733 (949)
Q Consensus 714 ~~r~~~iFvvG~NGrLYEwN 733 (949)
.-+++.+.+.+.||.++-|+
T Consensus 167 ~~d~~~l~sgs~dg~I~iwd 186 (753)
T 3jro_A 167 TKESRKFVTGGADNLVKIWK 186 (753)
T ss_dssp CGGGCCEEEEETTSCEEEEE
T ss_pred CCCCCEEEEEECCCeEEEEe
Confidence 01466788888999877763
No 137
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=56.31 E-value=1.4e+02 Score=28.48 Aligned_cols=54 Identities=7% Similarity=-0.047 Sum_probs=30.1
Q ss_pred eEEEEecCCCeEEEEEeCCCC-------eEEeecCCCCCCceeecCCCCccc-CceEEEEecCCceEEEEEeC
Q 043502 768 SLFMLSEDGGLVEYHWNTWDG-------WNWVEHGTPGKGVTLVGSPGPCLH-GNQLLLIGSDGKVYLRYMDQ 832 (949)
Q Consensus 768 slFm~~snG~LyEr~Wntg~g-------W~WVdHGtP~~gvtvv~spG~sf~-gsqLFviGSDG~LYeRywdg 832 (949)
.++..+.||.+. .|+..++ -....|..|...+ +|. ++++++.|+|+.+. .||..
T Consensus 219 ~l~~~~~d~~i~--iwd~~~~~~~~~~~~~~~~~~~~v~~~--------~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 219 ALAYAGHDSSVT--IAYPSAPEQPPRALITVKLSQLPLRSL--------LWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEEEETTTEEC---CEECSTTSCEEECCCEECSSSCEEEE--------EEEETTEEEEEESSSSEE-EECCC
T ss_pred EEEEEeCCCcEE--EEECCCCCCcceeeEeecCCCCceEEE--------EEcCCCCEEEEEcCCcEE-EEEeC
Confidence 455566777663 5553322 2244454443211 122 46888999999998 66653
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=55.49 E-value=1.3e+02 Score=28.02 Aligned_cols=19 Identities=16% Similarity=0.078 Sum_probs=15.1
Q ss_pred eEEEEcc-CCceeeeccCCc
Q 043502 285 VVYTISS-TGDLYEYDRISK 303 (949)
Q Consensus 285 vVftiss-~GdLYeYnr~tk 303 (949)
.+|+.+. ++.+|.||..+.
T Consensus 53 ~l~~~~~~~~~i~~~d~~~~ 72 (331)
T 3u4y_A 53 NVVVTSDFCQTLVQIETQLE 72 (331)
T ss_dssp EEEEEESTTCEEEEEECSSS
T ss_pred EEEEEeCCCCeEEEEECCCC
Confidence 5666666 889999998876
No 139
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=54.87 E-value=1.3e+02 Score=27.78 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=30.5
Q ss_pred eeecccCcEEEEec-CCeEeEEEEeceeeeeecCCCCCC-cce-EEeecccccccCeEEEEc-cCceEeeecCc
Q 043502 666 MKVTAEDALFFVSK-NGRLLQFTVALRKFKWKDCRHPLD-TKV-ACIVDQELFRENIVFVVG-RNGRLYQYNKV 735 (949)
Q Consensus 666 ~~vt~~dklF~vt~-~GrLlq~tva~rkwkW~dhg~PPg-TkI-ata~d~~~~r~~~iFvvG-~NGrLYEwNg~ 735 (949)
+.+..++.+|+++. +++++.+....... ..- +.+.. ..+ ..++++ ++.+|+++ .+++++.|+..
T Consensus 126 i~~~~~g~l~v~~~~~~~i~~~~~~g~~~-~~~-~~~~~~~~p~~i~~~~----~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 126 VTVDNKGRIIVVECKVMRVIIFDQNGNVL-HKF-GCSKHLEFPNGVVVND----KQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTSCEE-EEE-ECTTTCSSEEEEEECS----SSEEEEEEGGGTEEEEEETT
T ss_pred EEEeCCCCEEEEECCCCEEEEEcCCCCEE-EEe-CCCCccCCcEEEEECC----CCCEEEEECCCCEEEEEcCC
Confidence 34556677777753 56666544222111 111 11111 111 223333 34577765 58888887643
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=54.74 E-value=1.3e+02 Score=27.73 Aligned_cols=69 Identities=12% Similarity=0.177 Sum_probs=37.0
Q ss_pred eecceeecCCcEEEEEe-cCCceeEeeccCC-Cccc-----cCCCCCCCceeEEe-eccccCCceEEEEc-cCCceeeec
Q 043502 229 IKSGVVSQDGERVYFCT-KNGLLLELSEVEP-PRWL-----NHGRPPGANVAAIA-DAGNVRPEVVYTIS-STGDLYEYD 299 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~-knG~LLe~tel~p-~rW~-----~hg~PPga~VA~I~-D~~~~R~~vVftis-s~GdLYeYn 299 (949)
+..-.+|.||+.||++. .+|++.-+. ++. -+.. ....++|..+..|+ +.. -+.+|+.+ .+|.++-||
T Consensus 131 ~~~~~~s~dg~~l~~~~~~~~~v~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd---g~~l~~~~~~~~~i~~~~ 206 (343)
T 1ri6_A 131 CHSANISPDNRTLWVPALKQDRICLFT-VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN---EQYAYCVNELNSSVDVWE 206 (343)
T ss_dssp BCCCEECTTSSEEEEEEGGGTEEEEEE-ECTTSCEEEEEEEEEECSTTCCEEEEEECTT---SSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCCCEEEEecCCCCEEEEEE-ecCCCceeeecccccccCCCCCcceEEECCC---CCEEEEEeCCCCEEEEEE
Confidence 33445889999999998 677765544 221 1111 11223343333332 211 13455554 778888887
Q ss_pred cC
Q 043502 300 RI 301 (949)
Q Consensus 300 r~ 301 (949)
..
T Consensus 207 ~~ 208 (343)
T 1ri6_A 207 LK 208 (343)
T ss_dssp SS
T ss_pred ec
Confidence 64
No 141
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=54.38 E-value=1.6e+02 Score=29.11 Aligned_cols=161 Identities=14% Similarity=0.088 Sum_probs=0.0
Q ss_pred eecceeecCCcEEEEEecCCceeEee-ccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhh
Q 043502 229 IKSGVVSQDGERVYFCTKNGLLLELS-EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWR 307 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~knG~LLe~t-el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~ 307 (949)
|.+=..|.||+.|+.+..+|.+.-.. +-.+..-.-.++.....-.++...+ +.+++.+.+|.++-||-.+. .-.
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~----~~l~s~s~d~~v~iwd~~~~-~~~ 200 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG----DKLVSGSGDRTVRIWDLRTG-QCS 200 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTT-EEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC----CEEEEecCCCcEEEEECCCC-eeE
Q ss_pred hhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccceeEEEcCCCCCCcccccceeccCCccccc
Q 043502 308 KHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKWKWIIHGSPEDTHLTSITPVQQDESNEKF 387 (949)
Q Consensus 308 kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkWkWi~HGtP~~~~l~siT~v~~d~~~~~~ 387 (949)
..+..+.-+......|.-+..+..-..+.++.|| =.+.|.+++.--... ..+..+.+.++++.-.. ++
T Consensus 201 ~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iw-d~~~~~~~~~~~~~~-----~~~~~h~~~v~~v~~~~------~g 268 (393)
T 1erj_A 201 LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW-DSETGFLVERLDSEN-----ESGTGHKDSVYSVVFTR------DG 268 (393)
T ss_dssp EEEECSSCEEEEEECSTTCCEEEEEETTSCEEEE-ETTTCCEEEEEC-----------CCCSSCEEEEEECT------TS
T ss_pred EEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEE-ECCCCcEEEeecccc-----cCCCCCCCCEEEEEECC------CC
Q ss_pred eEEEEEcccceEEEEeecc
Q 043502 388 FSLFLTTSAGAVFEYQIPK 406 (949)
Q Consensus 388 ~sLF~t~S~G~Vyey~~~k 406 (949)
..|+..+.||.|..+.+.+
T Consensus 269 ~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 269 QSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp SEEEEEETTSEEEEEEC--
T ss_pred CEEEEEeCCCEEEEEECCC
No 142
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=53.54 E-value=1.8e+02 Score=28.91 Aligned_cols=156 Identities=19% Similarity=0.264 Sum_probs=79.0
Q ss_pred eeeeeeecc-eeEEEecccCchheeeccceeEEEcc-CCCcc----cc------CCeEEEEEEeceeeehhccCceEEEe
Q 043502 130 RISLTKMSE-TSIWVTGVSGSVYERFWNGVQWVIAP-HDLPI----SA------GPAISVFIVNQRILALAEAGVLYQMQ 197 (949)
Q Consensus 130 risltkmse-tsiwvtgesgsiyerfwng~~wviap-hdlp~----s~------g~ai~vfivn~tilalseag~lyqmq 197 (949)
.|+--+.|. -++-++|-.+.+ |.|+|-.|+.-- -..|. .+ |-.-..|.=+..|++-|..|.+.--.
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~~--r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd 109 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLSG--RCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWE 109 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCSS--SCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCce--EEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEe
Confidence 344444443 345555655554 899999998731 11111 11 11112344466788888888765444
Q ss_pred cCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee-ccCCC--ccccCCCCCCCceeE
Q 043502 198 LGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS-EVEPP--RWLNHGRPPGANVAA 274 (949)
Q Consensus 198 l~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t-el~p~--rW~~hg~PPga~VA~ 274 (949)
+.......=..+... .... .|.+=-+|.||++|+-+..+|.+.-.. +-.++ ....|. ..|-+
T Consensus 110 ~~~~~~~~~~~~~~~---------~H~~--~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~----~~V~~ 174 (344)
T 4gqb_B 110 LDENETLIVSKFCKY---------EHDD--IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA----AQVTC 174 (344)
T ss_dssp ECTTSSCEEEEEEEE---------CCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS----SCEEE
T ss_pred ccCCCceeEeecccc---------CCCC--CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC----CceEE
Confidence 433222211111110 0001 123334678888888888888765443 11111 112222 23433
Q ss_pred EeeccccCCceEEEEccCCceeeeccCCc
Q 043502 275 IADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 275 I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
++=. .--+.++.+.|.+|.++-||-.+.
T Consensus 175 ~~~~-~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 175 VAAS-PHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp EEEC-SSCTTEEEEEETTSCEEEEETTSS
T ss_pred EEec-CCCCCceeeecccccccccccccc
Confidence 3211 112356778899999999987664
No 143
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=50.59 E-value=1.9e+02 Score=28.41 Aligned_cols=219 Identities=11% Similarity=0.010 Sum_probs=107.1
Q ss_pred EEEecccCchheeecc----ceeEEEccCCCccccCCeEEEEEEeceeeehhccCceEEEecCCCCcceEEEeecccccc
Q 043502 141 IWVTGVSGSVYERFWN----GVQWVIAPHDLPISAGPAISVFIVNQRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQS 216 (949)
Q Consensus 141 iwvtgesgsiyerfwn----g~~wviaphdlp~s~g~ai~vfivn~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~ 216 (949)
+.+.+..|.| +.|+ ...-.+..|.-+|. ++-.-++.+++-+..|.++-..+....+++-+-..+
T Consensus 149 l~~~~~dg~i--~iwd~~~~~~~~~~~~~~~~v~-----~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----- 216 (401)
T 4aez_A 149 LSVGLGNGLV--DIYDVESQTKLRTMAGHQARVG-----CLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGH----- 216 (401)
T ss_dssp EEEEETTSCE--EEEETTTCCEEEEECCCSSCEE-----EEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC-----
T ss_pred EEEECCCCeE--EEEECcCCeEEEEecCCCCceE-----EEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCC-----
Confidence 3444456655 3453 23445556665543 333345566677788888877776555444322111
Q ss_pred ccccccccceeEeecceeecCCcEEEEEecCCceeEee-ccCCCc--cccCCCCCCCceeEEeeccccCCceEEEEc--c
Q 043502 217 INGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS-EVEPPR--WLNHGRPPGANVAAIADAGNVRPEVVYTIS--S 291 (949)
Q Consensus 217 ~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t-el~p~r--W~~hg~PPga~VA~I~D~~~~R~~vVftis--s 291 (949)
.. .|.+=..+.||..|+.++.+|.+.-+. .-..+. ...|..+ =..+++--| -+.++.+.+ .
T Consensus 217 ------~~---~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~p~----~~~ll~~~~gs~ 282 (401)
T 4aez_A 217 ------SS---EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA-VKAVAWCPW----QSNLLATGGGTM 282 (401)
T ss_dssp ------SS---CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC-CCEEEECTT----STTEEEEECCTT
T ss_pred ------CC---CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce-EEEEEECCC----CCCEEEEecCCC
Confidence 01 133334677899999999888776554 212222 2222221 122222211 234566554 6
Q ss_pred CCceeeeccCCchhhhhhccccccccccccccCcccccccccCCceeeEEEE-e--cCCcEEEEEeeccceeEEEcCCCC
Q 043502 292 TGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLL-T--KGGNLVERRIQQRKWKWIIHGSPE 368 (949)
Q Consensus 292 ~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFll-t--k~G~LVErr~~qrkWkWi~HGtP~ 368 (949)
+|.++-||-.+.-. .+.+-... . +..+.=+....+++. + .+|.+.=+.+...+..-+.--..+
T Consensus 283 d~~i~i~d~~~~~~-~~~~~~~~------~-------v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h 348 (401)
T 4aez_A 283 DKQIHFWNAATGAR-VNTVDAGS------Q-------VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH 348 (401)
T ss_dssp TCEEEEEETTTCCE-EEEEECSS------C-------EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC
T ss_pred CCEEEEEECCCCCE-EEEEeCCC------c-------EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC
Confidence 99999999766511 11111111 0 111111111123333 2 466666666654333222111112
Q ss_pred CCcccccceeccCCccccceEEEEEcccceEEEEeec
Q 043502 369 DTHLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQIP 405 (949)
Q Consensus 369 ~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~~~ 405 (949)
...++++.- .+ ++..|+..+.||.|+.|.+.
T Consensus 349 ~~~v~~~~~--s~----dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 349 DTRVLYSAL--SP----DGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp SSCCCEEEE--CT----TSSEEEEECTTSEEEEEECC
T ss_pred CCCEEEEEE--CC----CCCEEEEEeCCCcEEEEECC
Confidence 223344332 22 34668888899999999883
No 144
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=50.21 E-value=1.1e+02 Score=29.24 Aligned_cols=151 Identities=10% Similarity=0.088 Sum_probs=66.4
Q ss_pred eeecCCcEEEEEecCCceeEee-c----cCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhh
Q 043502 233 VVSQDGERVYFCTKNGLLLELS-E----VEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWR 307 (949)
Q Consensus 233 vvs~dg~~lff~~knG~LLe~t-e----l~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~ 307 (949)
..|.||+.|+.+..+|.+.-.. + ........|. ..|-+|+=.. ..+.+++.+.+|.++-||-.+...|+
T Consensus 18 ~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~----~~v~~~~~s~--~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 18 AFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHD----KIVTCVDWAP--KSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp EECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCS----SCEEEEEECT--TTCCEEEEETTSSEEEC------CCC
T ss_pred EECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCC----ceEEEEEEeC--CCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 4567777777776776554332 1 1111222232 2344432111 13578999999999999988763233
Q ss_pred hhcc-ccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeec-cceeEEEc-CCCCCCcccccceeccCCcc
Q 043502 308 KHIW-SKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQ-RKWKWIIH-GSPEDTHLTSITPVQQDESN 384 (949)
Q Consensus 308 kHiw-s~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~q-rkWkWi~H-GtP~~~~l~siT~v~~d~~~ 384 (949)
.... ..|. ....+ ..+.+ .| --|+.-+.||.+.-+.+.. ..|.=+.. ..|+...++++.-. +
T Consensus 92 ~~~~~~~~~----~~v~~--~~~~~-~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~--~--- 156 (377)
T 3dwl_C 92 QTLVLLRLN----RAATF--VRWSP-NE---DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWH--P--- 156 (377)
T ss_dssp CEEECCCCS----SCEEE--EECCT-TS---SCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEEC--T---
T ss_pred eeeEecccC----CceEE--EEECC-CC---CEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEc--C---
Confidence 2211 1111 01111 11111 11 1234445677665555542 22211111 11233444444332 2
Q ss_pred ccceEEEEEcccceEEEEeec
Q 043502 385 EKFFSLFLTTSAGAVFEYQIP 405 (949)
Q Consensus 385 ~~~~sLF~t~S~G~Vyey~~~ 405 (949)
++..|...+.||.|+.|.+.
T Consensus 157 -~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 157 -NNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp -TSSEEEEEESSSCEEEEEEC
T ss_pred -CCCEEEEEeCCCEEEEEEEE
Confidence 23456667789999999883
No 145
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=49.75 E-value=1.6e+02 Score=27.25 Aligned_cols=15 Identities=20% Similarity=0.514 Sum_probs=10.7
Q ss_pred eEEEEc-cCceEeeec
Q 043502 719 IVFVVG-RNGRLYQYN 733 (949)
Q Consensus 719 ~iFvvG-~NGrLYEwN 733 (949)
.+|+.. .+++|+.|+
T Consensus 189 ~l~v~~~~~~~i~~~~ 204 (314)
T 1pjx_A 189 QLIVAETPTKKLWSYD 204 (314)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCeEEEEE
Confidence 567764 578888865
No 146
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=49.18 E-value=1.2e+02 Score=29.42 Aligned_cols=64 Identities=8% Similarity=0.064 Sum_probs=32.5
Q ss_pred eecccCcEEEEec--CC-eEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEc-cCceEeeecC
Q 043502 667 KVTAEDALFFVSK--NG-RLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVG-RNGRLYQYNK 734 (949)
Q Consensus 667 ~vt~~dklF~vt~--~G-rLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG-~NGrLYEwNg 734 (949)
.+..++++|+++. ++ +++.+.....+.+-.. ..| +..... +.....++.+++.. .+|+||.++.
T Consensus 78 a~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~-~~~-~~~~~~--g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 78 AFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL-TLP-DAIFLN--GITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE-ECT-TCSCEE--EEEESSSSEEEEEETTTTEEEEEET
T ss_pred EEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEE-eCC-CccccC--cccccCCCcEEEEECCCCeEEEEeC
Confidence 4566778888773 23 4666543333332111 112 211111 11124566677777 4899999654
No 147
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=49.17 E-value=1.8e+02 Score=27.53 Aligned_cols=12 Identities=17% Similarity=0.194 Sum_probs=9.4
Q ss_pred CCceeeeccCCc
Q 043502 292 TGDLYEYDRISK 303 (949)
Q Consensus 292 ~GdLYeYnr~tk 303 (949)
++.||.||..+.
T Consensus 161 ~~~l~~~~~~~~ 172 (333)
T 2dg1_A 161 LGGVYYVSPDFR 172 (333)
T ss_dssp CEEEEEECTTSC
T ss_pred CceEEEEeCCCC
Confidence 588999997663
No 148
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=47.41 E-value=2.1e+02 Score=27.96 Aligned_cols=55 Identities=5% Similarity=-0.053 Sum_probs=27.0
Q ss_pred eEEEEeeCCeeEEEEecCCEEEEEe--cCCCCCccccccccccc-eEEEeccCcEEEE
Q 043502 577 SFFLITDGGFTFEYLYAESVWLWLR--HDHSTPMRGVLGNYNGS-LYMVDLYGSLLIR 631 (949)
Q Consensus 577 s~fliTd~G~~fE~~~~~~~WlWl~--H~h~T~m~g~~g~~ngs-Lf~vd~~GsL~~R 631 (949)
-|+....||.+.=+=...+.-+-.- .+|+.++....=+.+|+ |+....+|++.+=
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 203 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVI 203 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEE
Confidence 3444556666543333344444333 45554444333334554 4455667776553
No 149
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=47.00 E-value=2e+02 Score=27.49 Aligned_cols=63 Identities=8% Similarity=0.132 Sum_probs=33.3
Q ss_pred eeecccCcEEEEecCCeEeEEEEeceee--eeec---C---CCCCCcceEEeecccccccCeEEEEccC---ceEeeecC
Q 043502 666 MKVTAEDALFFVSKNGRLLQFTVALRKF--KWKD---C---RHPLDTKVACIVDQELFRENIVFVVGRN---GRLYQYNK 734 (949)
Q Consensus 666 ~~vt~~dklF~vt~~GrLlq~tva~rkw--kW~d---h---g~PPgTkIata~d~~~~r~~~iFvvG~N---GrLYEwNg 734 (949)
+.+..++.+++.+.+|.+.-+-....+. ++.. | ..| -+.|+.. + .++.+++.+.| |.++-|+-
T Consensus 192 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~-i~~i~~~--~---~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 192 VDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS-IRSVKFS--P---QGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp EEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC-EEEEEEC--S---STTEEEEEEEETTEEEEEEEET
T ss_pred EEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc-cceEEEC--C---CCCEEEEEecCCCCceEEEEEC
Confidence 3445555555567788877665543333 3333 3 222 1222222 2 35567777778 88888663
No 150
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=46.58 E-value=2.5e+02 Score=28.50 Aligned_cols=191 Identities=15% Similarity=0.095 Sum_probs=90.7
Q ss_pred ecceeecCCc-EEEEEecCCceeEeeccCCCc----cccCCCCCCCceeEEeeccccC-CceEEEEccCCceeeeccCCc
Q 043502 230 KSGVVSQDGE-RVYFCTKNGLLLELSEVEPPR----WLNHGRPPGANVAAIADAGNVR-PEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 230 k~gvvs~dg~-~lff~~knG~LLe~tel~p~r----W~~hg~PPga~VA~I~D~~~~R-~~vVftiss~GdLYeYnr~tk 303 (949)
..-..+.||. .|+.+..+|.+.-.. ++..+ ...|.. .+..|.+++=.. . .+.+++.+.+|.++-||-.+.
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd-~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQ-GPPFKFSASDRTHHK-QGSFVRDVEFSP--DSGEFVITVGSDRKISCFDGKSG 239 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEE-TTTBEEEEEECSSSC-TTCCEEEEEECS--TTCCEEEEEETTCCEEEEETTTC
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEe-CCCcceeeeecccCC-CCceEEEEEECC--CCCCEEEEEeCCCeEEEEECCCC
Confidence 3344566776 566666666554433 11111 111211 111344443110 1 248899999999999996654
Q ss_pred hhhhhhccc---cccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeecc--ceeEEEcCCCCCCccccccee
Q 043502 304 PSWRKHIWS---KGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQR--KWKWIIHGSPEDTHLTSITPV 378 (949)
Q Consensus 304 psW~kHiws---~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qr--kWkWi~HGtP~~~~l~siT~v 378 (949)
.. ...+.. .|. .... ...+. .| --|+..+.+|.+.-+.+... ....-.|+.+....+.++..
T Consensus 240 ~~-~~~~~~~~~~~~----~~v~--~~~~~--~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~- 306 (615)
T 1pgu_A 240 EF-LKYIEDDQEPVQ----GGIF--ALSWL--DS---QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA- 306 (615)
T ss_dssp CE-EEECCBTTBCCC----SCEE--EEEES--SS---SEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEE-
T ss_pred CE-eEEecccccccC----CceE--EEEEc--CC---CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEe-
Confidence 11 111101 111 0111 11111 22 12444455777766665522 22333343444333333332
Q ss_pred ccCCccccceEEEEEcccceEEEEeeccCCCCCccccccccccccCCCcccccccCCCCcccccceEEEEeCCCceeecc
Q 043502 379 QQDESNEKFFSLFLTTSAGAVFEYQIPKYSGTSQENQFSGGWISHLHPPHARAARGAVGLPFQVGRTIFPLDDGRLAELH 458 (949)
Q Consensus 379 ~~d~~~~~~~sLF~t~S~G~Vyey~~~k~tg~~q~nq~~~~W~sh~~P~~ak~a~~~~g~pfq~grviF~L~DGRLaELh 458 (949)
+ ++..|+..+.+|.++.|.+.. .+.......|..+ +..+.| .+ ++..-.||++.-..
T Consensus 307 --~----~~~~l~~~~~~g~i~~~d~~~-------~~~~~~~~~~~~~--------v~~~~~-~~-l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 307 --T----GNGRIISLSLDGTLNFYELGH-------DEVLKTISGHNKG--------ITALTV-NP-LISGSYDGRIMEWS 363 (615)
T ss_dssp --E----ETTEEEEEETTSCEEEEETTE-------EEEEEEECCCSSC--------EEEEET-TT-TEEEETTSCEEETT
T ss_pred --C----CCCeEEEEECCCCEEEEECCC-------CcEEEEEeCCCCC--------EEEEEe-cC-cEEECCCCeEEEEE
Confidence 1 346788889999999998743 1111222333322 222333 33 66667788777665
Q ss_pred cC
Q 043502 459 PS 460 (949)
Q Consensus 459 l~ 460 (949)
+.
T Consensus 364 ~~ 365 (615)
T 1pgu_A 364 SS 365 (615)
T ss_dssp TT
T ss_pred ch
Confidence 54
No 151
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=46.55 E-value=1.9e+02 Score=27.10 Aligned_cols=22 Identities=18% Similarity=0.119 Sum_probs=12.0
Q ss_pred eecccCcEEEEecC-CeEeEEEE
Q 043502 667 KVTAEDALFFVSKN-GRLLQFTV 688 (949)
Q Consensus 667 ~vt~~dklF~vt~~-GrLlq~tv 688 (949)
.+..++++++++.. ++|+.+-.
T Consensus 75 ~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 75 CLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp EECTTCCEEEEETTTTEEEEECS
T ss_pred eECCCCcEEEEecCCCeEEEEcC
Confidence 34556667666643 55555433
No 152
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=46.02 E-value=1.9e+02 Score=26.91 Aligned_cols=62 Identities=10% Similarity=0.085 Sum_probs=30.8
Q ss_pred cEEEEecCCeEeEEEEece---eeeeecCCCCCCcceEE-eecccc-cccCeEEEEccCceEeeecC
Q 043502 673 ALFFVSKNGRLLQFTVALR---KFKWKDCRHPLDTKVAC-IVDQEL-FRENIVFVVGRNGRLYQYNK 734 (949)
Q Consensus 673 klF~vt~~GrLlq~tva~r---kwkW~dhg~PPgTkIat-a~d~~~-~r~~~iFvvG~NGrLYEwNg 734 (949)
.|+.++.||.+.-+-.... ..++..|.......|.. +..+.. -.++.+++.+.||.++-|+-
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 197 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDL 197 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEET
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEEC
Confidence 5666678887765444322 23333333222223322 212222 24556666777899888653
No 153
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=44.64 E-value=1.3e+02 Score=32.10 Aligned_cols=50 Identities=22% Similarity=0.235 Sum_probs=28.7
Q ss_pred ceEEEEecCCCeEEEEEeCCCCeEEeecCCCCCCceeecCCCCccc--CceEEEEecCCceEE
Q 043502 767 GSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCLH--GNQLLLIGSDGKVYL 827 (949)
Q Consensus 767 gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf~--gsqLFviGSDG~LYe 827 (949)
+.++.++.||...+-++ .+. |+ +.+..+-.|-++. +..|.+..++|+||.
T Consensus 159 ~~I~rV~pdG~~~~~~~--------~~~--~~-~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~ 210 (334)
T 2p9w_A 159 PAIARVSADGKTVSTFA--------WES--GN-GGQRPGYSGITFDPHSNKLIAFGGPRALTA 210 (334)
T ss_dssp CEEEEECTTSCCEEEEE--------ECC--CC-SSSCCSCSEEEEETTTTEEEEESSSSSEEE
T ss_pred CeEEEEeCCCCEEeeee--------ecC--CC-cccccCcceEEEeCCCCEEEEEcCCCeEEE
Confidence 34778888887443111 111 22 2334455555565 667888888888765
No 154
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=44.53 E-value=3.4e+02 Score=29.48 Aligned_cols=18 Identities=22% Similarity=0.457 Sum_probs=14.4
Q ss_pred cceeecCCcEEEEEecCC
Q 043502 231 SGVVSQDGERVYFCTKNG 248 (949)
Q Consensus 231 ~gvvs~dg~~lff~~knG 248 (949)
+-.+|.||++|+|...++
T Consensus 231 ~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp EEEECTTSCCEEEEEEET
T ss_pred EEEECCCCCEEEEEEeCC
Confidence 446899999999988666
No 155
>2bt9_A Lectin; sugar recognition, beta-propeller; HET: MFU; 0.94A {Ralstonia solanacearum} PDB: 2bs5_A* 2bs6_A* 3zw0_A* 3zw1_B* 3zw2_A* 3zwe_A* 3zzv_A* 3zw0_B* 3zw1_A*
Probab=42.95 E-value=26 Score=31.78 Aligned_cols=60 Identities=18% Similarity=0.480 Sum_probs=42.5
Q ss_pred eEEEEccCceEee--ecCceeeeeecCCCCceeeecCCCceecCC----CCCCcceEEEEecCCCeEEEEEeCCCCeE
Q 043502 719 IVFVVGRNGRLYQ--YNKVTELWHEHYQSQHLVLSILPGTAMRPP----SASLTGSLFMLSEDGGLVEYHWNTWDGWN 790 (949)
Q Consensus 719 ~iFvvG~NGrLYE--wNg~TW~WhdHGkP~~t~ls~~pGtAM~ps----k~sl~gslFm~~snG~LyEr~Wntg~gW~ 790 (949)
+||. ..|.+|-| |.+.. |++=+- ..||+++..- ....-.|+|- +.++.+.|.-|+ +.+|+
T Consensus 17 RVYy-~~~~~i~E~~~dg~~--W~~g~~-------a~P~t~IAA~sw~g~~~~~IRVY~-~~~n~i~E~~w~-~~~W~ 82 (90)
T 2bt9_A 17 RVYT-ANNGKITERCWDGKG--WYTGAF-------NEPGDNVSVTSWLVGSAIHIRVYA-STGTTTTEWCWD-GNGWT 82 (90)
T ss_dssp EEEE-EETTEEEEEEESSSC--EEEEEE-------EEECSEEEEEEEEETTEEEEEEEE-EETTEEEEEEES-SSCEE
T ss_pred EEEE-cCCCcEEEEEEcCCc--cccCcc-------cCCCCcEEEEEccCCCcEEEEEEE-CCCCcEEEEEEc-CCcee
Confidence 6788 88999999 88766 666442 3455555431 1123568999 889999999999 77765
No 156
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=42.40 E-value=2.1e+02 Score=26.46 Aligned_cols=149 Identities=8% Similarity=0.055 Sum_probs=72.5
Q ss_pred eeecCCcEEEEEecCCceeEeeccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhccc
Q 043502 233 VVSQDGERVYFCTKNGLLLELSEVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWS 312 (949)
Q Consensus 233 vvs~dg~~lff~~knG~LLe~tel~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws 312 (949)
..+.++..|+.+..+|.+.-.......+...--......|..++=...-...++++.+.+|.++-||..+...-+. ..
T Consensus 135 ~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~--~~ 212 (340)
T 4aow_A 135 AFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN--HI 212 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE--EC
T ss_pred EEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE--ec
Confidence 3566777777777777665443211111111111223345554433444456778889999999999876522111 11
Q ss_pred cccccccccccCcccccccccCCceeeEE-EEecCCcEEEEEeec-cceeEEEcCCCCCCcccccceeccCCccccceEE
Q 043502 313 KGTAANASLIPSMACTLHGLIGDHSTSLF-LLTKGGNLVERRIQQ-RKWKWIIHGSPEDTHLTSITPVQQDESNEKFFSL 390 (949)
Q Consensus 313 ~~l~~~~sl~~s~g~t~~gl~g~~S~SLF-lltk~G~LVErr~~q-rkWkWi~HGtP~~~~l~siT~v~~d~~~~~~~sL 390 (949)
.|. ....++. +.+ .| .++ --+.||.+.=+.+.. ..-.-+.|+.+ ++++.. .| + ..+
T Consensus 213 ~h~----~~v~~~~--~s~-~~----~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~----v~~~~~--~~--~---~~~ 270 (340)
T 4aow_A 213 GHT----GYLNTVT--VSP-DG----SLCASGGKDGQAMLWDLNEGKHLYTLDGGDI----INALCF--SP--N---RYW 270 (340)
T ss_dssp CCS----SCEEEEE--ECT-TS----SEEEEEETTCEEEEEETTTTEEEEEEECSSC----EEEEEE--CS--S---SSE
T ss_pred CCC----CcEEEEE--ECC-CC----CEEEEEeCCCeEEEEEeccCceeeeecCCce----EEeeec--CC--C---Cce
Confidence 121 1111111 111 12 222 235677766555542 22223344322 233222 21 1 247
Q ss_pred EEEcccceEEEEeec
Q 043502 391 FLTTSAGAVFEYQIP 405 (949)
Q Consensus 391 F~t~S~G~Vyey~~~ 405 (949)
+..++||.|+.|.+.
T Consensus 271 ~~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 271 LCAATGPSIKIWDLE 285 (340)
T ss_dssp EEEEETTEEEEEETT
T ss_pred eeccCCCEEEEEECC
Confidence 778889999988774
No 157
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=41.19 E-value=2.9e+02 Score=29.84 Aligned_cols=155 Identities=10% Similarity=0.201 Sum_probs=79.5
Q ss_pred eeecCCc-EEEEEecCCceeEeeccCCCccccCCCCCCCceeEEeeccccCCceEEEEccC---Cce--eeeccCCchhh
Q 043502 233 VVSQDGE-RVYFCTKNGLLLELSEVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISST---GDL--YEYDRISKPSW 306 (949)
Q Consensus 233 vvs~dg~-~lff~~knG~LLe~tel~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~---GdL--YeYnr~tkpsW 306 (949)
||.+|.+ -|+..+.+|++||+.. -+++-|.++..=.....=+-.++|+..|. .+| |..|+.+++ +
T Consensus 43 ii~t~k~~gL~Vydl~G~~l~~~~--------~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 43 LITTNKKSGLVVYSLDGKMLHSYN--------TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp EEEEETTTEEEEEETTSCEEEEEC--------CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred EEEEcCCCCEEEEcCCCcEEEEcc--------CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 5544332 5777788999999863 24444444433110000011245555553 333 555766663 1
Q ss_pred hhhccccccccccccccCccccc-cc-ccCCceeeEEEEecCCcEEEEEeeccceeEEEcCCCCCCcccccceeccCCcc
Q 043502 307 RKHIWSKGTAANASLIPSMACTL-HG-LIGDHSTSLFLLTKGGNLVERRIQQRKWKWIIHGSPEDTHLTSITPVQQDESN 384 (949)
Q Consensus 307 ~kHiws~~l~~~~sl~~s~g~t~-~g-l~g~~S~SLFlltk~G~LVErr~~qrkWkWi~HGtP~~~~l~siT~v~~d~~~ 384 (949)
+.+-...+.....+...+|-.+ +. ..| ..-+|...|+|.+..|++... .-|+.....+..+....|+|.|
T Consensus 114 -~~i~~~~~pv~t~~~~pyGlcly~~~~~g--~~yafV~~k~G~~~q~~l~~~-----~~g~~~~~lVR~f~lgsq~Egc 185 (355)
T 3amr_A 114 -QSMTDPDHPIATAINEVYGFTLYHSQKTG--KYYAMVTGKEGEFEQYELKAD-----KNGYISGKKVRAFKMNSQTEGM 185 (355)
T ss_dssp -EECSCTTSCEECCCSSCCCEEEEECTTTC--CEEEEEECSSSEEEEEEEEEC-----TTSCEEEEEEEEEECSSCEEEE
T ss_pred -eeccccccCcCCCCCCeeEEEEEecCCCC--cEEEEEECCCCeEEEEEEEeC-----CCCcccceEEEEecCCCCcceE
Confidence 1121100000112244555444 22 223 346999999999999998621 1133344556666666777777
Q ss_pred cc---ceEEEEEcccceEEEEee
Q 043502 385 EK---FFSLFLTTSAGAVFEYQI 404 (949)
Q Consensus 385 ~~---~~sLF~t~S~G~Vyey~~ 404 (949)
-. .-.||+.--+--+++|..
T Consensus 186 vvDd~~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 186 AADDEYGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp EEETTTTEEEEEETTTEEEEEEC
T ss_pred EEcCCCCeEEEecccceEEEEeC
Confidence 53 235666665544666654
No 158
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=41.10 E-value=4e+02 Score=29.29 Aligned_cols=66 Identities=12% Similarity=0.262 Sum_probs=40.3
Q ss_pred eeecCCcEEEEEec----CCceeEeeccCC--CccccCCCCCCCceeEEeeccccCCceEEEEccCC--ceeeeccCC
Q 043502 233 VVSQDGERVYFCTK----NGLLLELSEVEP--PRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTG--DLYEYDRIS 302 (949)
Q Consensus 233 vvs~dg~~lff~~k----nG~LLe~tel~p--~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~G--dLYeYnr~t 302 (949)
.+++||.+|||.+. +++|..+. +.. -+|+.-- |....+ |.+.......+||+...+| +||.+|...
T Consensus 322 ~~~~dg~~l~~~s~~~~~~~~l~~~d-~~~~~~~~~~l~-~~~~~~--l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 322 FVDGVGDQLWFVSGDGAPLKKIVRVD-LSGSTPRFDTVV-PESKDN--LESVGIAGNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp EEEEETTEEEEEECTTCTTCEEEEEE-CSSSSCEEEEEE-CCCSSE--EEEEEEEBTEEEEEEEETTEEEEEEEETTS
T ss_pred EEeccCCEEEEEECCCCCCCEEEEEe-CCCCccccEEEe-cCCCCe--EEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence 46789999999986 55676655 333 2455432 222222 3333444667888888777 588888543
No 159
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=40.97 E-value=2.2e+02 Score=27.32 Aligned_cols=161 Identities=11% Similarity=0.086 Sum_probs=0.0
Q ss_pred eecceeecCCcEEEEEecCCceeEee-cc-----CCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCC
Q 043502 229 IKSGVVSQDGERVYFCTKNGLLLELS-EV-----EPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRIS 302 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~knG~LLe~t-el-----~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~t 302 (949)
|..=..+.||..|+.+..+|.+.-+. +- ++.+=...+.-+=..+++--| ..+.+++.+.+|.++-||-.+
T Consensus 70 v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~l~s~~~dg~v~iwd~~~ 145 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK----QDNVLASGGNNGEIFIWDMNK 145 (416)
T ss_dssp EEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS----STTBEEEECSSSCEEBCBTTT
T ss_pred eEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC----CCCEEEEEcCCCeEEEEECCC
Q ss_pred ch---------hhhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccceeEEEcCCCCCCccc
Q 043502 303 KP---------SWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKWKWIIHGSPEDTHLT 373 (949)
Q Consensus 303 kp---------sW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkWkWi~HGtP~~~~l~ 373 (949)
.. .-....-....+......+.-+..+..-..+..+-+|=+...-.+.+...+... ..+...++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-------~~~~~~v~ 218 (416)
T 2pm9_A 146 CTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN-------SGIKQQLS 218 (416)
T ss_dssp TSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS-------SCCCCCEE
T ss_pred CccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc-------cccCCceE
Q ss_pred ccceeccCCccccceEEEEEcccc----eEEEEeecc
Q 043502 374 SITPVQQDESNEKFFSLFLTTSAG----AVFEYQIPK 406 (949)
Q Consensus 374 siT~v~~d~~~~~~~sLF~t~S~G----~Vyey~~~k 406 (949)
++.-...... +++++++. .|+.|.+..
T Consensus 219 ~~~~~~~~~~------~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 219 VVEWHPKNST------RVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTT------EEEEEECCSSSCCCCEEETTS
T ss_pred EEEECCCCCC------EEEEEECCCCCceEEEEeCCC
No 160
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=40.95 E-value=2.3e+02 Score=26.48 Aligned_cols=154 Identities=9% Similarity=0.058 Sum_probs=0.0
Q ss_pred eecceeecCCcEEEEEecCCceeEee--ccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhh
Q 043502 229 IKSGVVSQDGERVYFCTKNGLLLELS--EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSW 306 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~knG~LLe~t--el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW 306 (949)
|.+=..+.||..|+.+..+|.+.-+. .-+.++-......+.....++...+ +.+++.+.+|.++-||-.+...=
T Consensus 152 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 152 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS----SEEEEEETTTEEEEEETTTTEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCC----CEEEEEcCCCeEEEEECCCCcEE
Q ss_pred hhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEee-ccceeEEEcCCCCCCcccccceeccCCccc
Q 043502 307 RKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQ-QRKWKWIIHGSPEDTHLTSITPVQQDESNE 385 (949)
Q Consensus 307 ~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~-qrkWkWi~HGtP~~~~l~siT~v~~d~~~~ 385 (949)
+..--............+......=++|+...+|.+.+-..+-+-..+. ....-+-..=.|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~----------------- 290 (312)
T 4ery_A 228 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT----------------- 290 (312)
T ss_dssp EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSS-----------------
T ss_pred EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCc-----------------
Q ss_pred cceEEEEEcc---cceEEEEeec
Q 043502 386 KFFSLFLTTS---AGAVFEYQIP 405 (949)
Q Consensus 386 ~~~sLF~t~S---~G~Vyey~~~ 405 (949)
.+++++++ ||.|..+..+
T Consensus 291 --~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 291 --ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp --SSEEEEEECTTTCCEEEEECC
T ss_pred --CCceEEEEccCCccEEEecCC
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=40.08 E-value=2.3e+02 Score=26.21 Aligned_cols=19 Identities=16% Similarity=0.275 Sum_probs=12.4
Q ss_pred cCeEEEE-ccCceEeeecCc
Q 043502 717 ENIVFVV-GRNGRLYQYNKV 735 (949)
Q Consensus 717 ~~~iFvv-G~NGrLYEwNg~ 735 (949)
++.+|++ ..+++++.|+..
T Consensus 131 ~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 131 KGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TSCEEEEETTTTEEEEECTT
T ss_pred CCCEEEEECCCCEEEEEcCC
Confidence 3456665 467899997643
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=40.04 E-value=1.8e+02 Score=30.37 Aligned_cols=18 Identities=11% Similarity=-0.249 Sum_probs=14.7
Q ss_pred ecceeecCCcEEEEEecC
Q 043502 230 KSGVVSQDGERVYFCTKN 247 (949)
Q Consensus 230 k~gvvs~dg~~lff~~kn 247 (949)
.+..+|.||++|+|+..+
T Consensus 153 ~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp CEEEEEEETTEEEEEEEE
T ss_pred ceEEECCCCCEEEEEEEc
Confidence 466789999999988765
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=39.92 E-value=1.3e+02 Score=31.60 Aligned_cols=18 Identities=17% Similarity=0.267 Sum_probs=13.7
Q ss_pred ecceeecCCcEEEEEecC
Q 043502 230 KSGVVSQDGERVYFCTKN 247 (949)
Q Consensus 230 k~gvvs~dg~~lff~~kn 247 (949)
.+-.+|.||++|+|+..+
T Consensus 191 ~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp CCCEECTTSSEEEEEEEC
T ss_pred cCceECCCCCEEEEEECC
Confidence 344589999999988754
No 164
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=39.05 E-value=1.6e+02 Score=31.47 Aligned_cols=16 Identities=6% Similarity=0.121 Sum_probs=13.5
Q ss_pred eeecCCcEEEEEecCC
Q 043502 233 VVSQDGERVYFCTKNG 248 (949)
Q Consensus 233 vvs~dg~~lff~~knG 248 (949)
..|.||++|+|+..++
T Consensus 215 ~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 215 WWAPDDSAIAYARIDE 230 (741)
T ss_dssp EECTTSSCEEEEEEEC
T ss_pred EECCCCCEEEEEEEcC
Confidence 5799999999997765
No 165
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=38.37 E-value=1.3e+02 Score=32.12 Aligned_cols=20 Identities=30% Similarity=0.451 Sum_probs=15.3
Q ss_pred eecceeecCCcEEEEEec-CC
Q 043502 229 IKSGVVSQDGERVYFCTK-NG 248 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~k-nG 248 (949)
+.+=.+|.||++|+|+.. +|
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~ 59 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDS 59 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSS
T ss_pred CCCceEecCCCEEEEEeccCC
Confidence 344467999999999887 66
No 166
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=38.00 E-value=3.3e+02 Score=27.46 Aligned_cols=208 Identities=11% Similarity=0.124 Sum_probs=0.0
Q ss_pred CccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCCcee-ecCCCCCCCCCcceeecccCcEEEEe--cCCeE
Q 043502 607 PMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKGRQV-IGGPPWDGITGKAMKVTAEDALFFVS--KNGRL 683 (949)
Q Consensus 607 ~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G~~V-~~G~pwdgipG~~~~vt~~dklF~vt--~~GrL 683 (949)
|+.|..++.+|=-|--| .++|+.=......+.=++-+ .+--+++ +.| ....-|++. ..+..|+++ .+++|
T Consensus 21 ~l~g~~~~lSGla~~~~-~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g--~~D~EGIa~---~~~g~~~vs~E~~~~l 93 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQ-SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF--VKDLETIEY---IGDNQFVISDERDYAI 93 (255)
T ss_dssp ECTTCCSCEEEEEEETT-TTEEEEEEETTEEEEEEETT-CCEEEEEECSS--CSSEEEEEE---CSTTEEEEEETTTTEE
T ss_pred ECCCcccCcceeEEeCC-CCEEEEEECCCCeEEEEeCC-CCEEEEEecCC--CCChHHeEE---eCCCEEEEEECCCCcE
Q ss_pred eEEEEeceeeee-------ecCCCCCCcce-EEeecccccccCeEEEEccCc-eEeeecCc------eeeee-------e
Q 043502 684 LQFTVALRKFKW-------KDCRHPLDTKV-ACIVDQELFRENIVFVVGRNG-RLYQYNKV------TELWH-------E 741 (949)
Q Consensus 684 lq~tva~rkwkW-------~dhg~PPgTkI-ata~d~~~~r~~~iFvvG~NG-rLYEwNg~------TW~Wh-------d 741 (949)
+.+.+....--| .-...|++... ..|.|+. .+.-+.+..++- +||+|+|. +-.-. +
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~--~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ--DHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT--TTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCC--CCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc
Q ss_pred cCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCCCeEEeecCCCCCCceeecCCCCccc-CceEEEEe
Q 043502 742 HYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCLH-GNQLLLIG 820 (949)
Q Consensus 742 HGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf~-gsqLFviG 820 (949)
-.++++..+...+|.-+. .+.-..+|+..+.+|+ .-.++. ...|...-.-++...-|=+|+ ..+||++
T Consensus 172 ~~d~S~l~~dp~tg~lli--LS~~s~~L~~~d~~g~-~~~~~~-------L~~g~~~l~~~~~qpEGia~d~~G~lyIv- 240 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLV--LSHESRALQEVTLVGE-VIGEMS-------LTKGSRGLSHNIKQAEGVAMDASGNIYIV- 240 (255)
T ss_dssp SSCCCEEEEETTTTEEEE--EETTTTEEEEECTTCC-EEEEEE-------CSTTGGGCSSCCCSEEEEEECTTCCEEEE-
T ss_pred cCCceeEEEcCCCCeEEE--EECCCCeEEEEcCCCC-EEEEEE-------cCCccCCcccccCCCCeeEECCCCCEEEE-
Q ss_pred cCCceEEEEEeCCc
Q 043502 821 SDGKVYLRYMDQMT 834 (949)
Q Consensus 821 SDG~LYeRywdg~t 834 (949)
+.++++-||-...+
T Consensus 241 sE~n~~y~f~~~~~ 254 (255)
T 3qqz_A 241 SEPNRFYRFTPQSS 254 (255)
T ss_dssp ETTTEEEEEEC---
T ss_pred cCCceEEEEEecCC
No 167
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=37.84 E-value=2e+02 Score=28.26 Aligned_cols=27 Identities=7% Similarity=0.074 Sum_probs=16.2
Q ss_pred ceEEEEec----CCCeEEEEEeCCCCeEEee
Q 043502 767 GSLFMLSE----DGGLVEYHWNTWDGWNWVE 793 (949)
Q Consensus 767 gslFm~~s----nG~LyEr~Wntg~gW~WVd 793 (949)
+.+|+.++ ++.++-.-..++.-|+..+
T Consensus 132 g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 132 NFVYISDPAPDDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp TEEEEEECCSGGGCEEEEEETTTCCEEEECT
T ss_pred CEEEEEcCccCCCCeEEEEECCCCCEEEEec
Confidence 46777664 5666655445566676654
No 168
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=36.79 E-value=2.8e+02 Score=26.32 Aligned_cols=25 Identities=12% Similarity=-0.004 Sum_probs=18.4
Q ss_pred cceEEEEEccc-ceEEEEeeccCCCC
Q 043502 386 KFFSLFLTTSA-GAVFEYQIPKYSGT 410 (949)
Q Consensus 386 ~~~sLF~t~S~-G~Vyey~~~k~tg~ 410 (949)
++..||++.++ +.|..|.++.-+|.
T Consensus 296 dg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 296 TEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 34678888875 88999988665553
No 169
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=36.30 E-value=2.4e+02 Score=28.32 Aligned_cols=96 Identities=18% Similarity=0.232 Sum_probs=56.3
Q ss_pred eeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccCCCcc
Q 043502 184 ILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVEPPRW 261 (949)
Q Consensus 184 ilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~p~rW 261 (949)
++.||+.|.+-.+.+.+-. + +..+.++.-..+.+ ++......|+|.|.+|+...|. +|..-|
T Consensus 5 ~v~lT~~G~iKr~~~~~~~----------~--~~~~lke~D~l~~~---~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r- 68 (256)
T 1zvt_A 5 TIVLSQMGWVRSAKGHDID----------A--PGLNYKAGDSFKAA---VKGKSNQPVVFVDSTGRSYAIDPITLPSAR- 68 (256)
T ss_dssp EEEEETTSEEEEEESSCCC----------S--TTSCCCTTCCEEEE---EEEETTSCEEEEETTSEEEEECGGGSCCSS-
T ss_pred EEEEeCCCEEEEeeCCcCC----------c--eeccCCCCCEEEEE---EEeCCCCEEEEEeCCCeEEEEEHHHCCCcC-
Confidence 4567889988888765432 1 11122222223322 2333455899999999999998 454444
Q ss_pred ccCCC--------CCCCceeEEeeccccCCceEEEEccCCceeee
Q 043502 262 LNHGR--------PPGANVAAIADAGNVRPEVVYTISSTGDLYEY 298 (949)
Q Consensus 262 ~~hg~--------PPga~VA~I~D~~~~R~~vVftiss~GdLYeY 298 (949)
..|+ .+|.+|.++.-.+. ..-++.++++|..-..
T Consensus 69 -~~G~~i~~~i~L~~~e~Iv~~~~~~~--~~~lll~T~~G~~Kr~ 110 (256)
T 1zvt_A 69 -GQGEPLTGKLTLPPGATVDHMLMESD--DQKLLMASDAGYGFVC 110 (256)
T ss_dssp -SCCEEGGGTCCCCTTCCEEEEECCCT--TCEEEEEBTTSEEEEE
T ss_pred -CCCeEeeeeecCCCCCEEEEEEEeCC--CCEEEEEeCCCeEEEe
Confidence 3443 45777776654221 2347788999865433
No 170
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=35.67 E-value=99 Score=28.49 Aligned_cols=121 Identities=12% Similarity=0.068 Sum_probs=0.0
Q ss_pred eeecCCcEEEEEec-CCceeEee-ccCCCccccCCCCCCCceeEEeeccccCCc-eEEEEc------------cCCceee
Q 043502 233 VVSQDGERVYFCTK-NGLLLELS-EVEPPRWLNHGRPPGANVAAIADAGNVRPE-VVYTIS------------STGDLYE 297 (949)
Q Consensus 233 vvs~dg~~lff~~k-nG~LLe~t-el~p~rW~~hg~PPga~VA~I~D~~~~R~~-vVftis------------s~GdLYe 297 (949)
.+|.||++||++.. +|.|..+. +-.+....-...+++..-..+.+...-..+ .+|+.+ .++.++-
T Consensus 40 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v 119 (337)
T 1pby_B 40 MVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119 (337)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEE
Q ss_pred eccCCchhhhhhccccccccccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccce
Q 043502 298 YDRISKPSWRKHIWSKGTAANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRKW 359 (949)
Q Consensus 298 Ynr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrkW 359 (949)
||..+. .-.+.+-....+......+.-...+.+ +..|++++-..+-+.+.+....|
T Consensus 120 ~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~-----~~~i~~~d~~~~~~~~~~~~~~~ 175 (337)
T 1pby_B 120 YDAETL-SRRKAFEAPRQITMLAWARDGSKLYGL-----GRDLHVMDPEAGTLVEDKPIQSW 175 (337)
T ss_dssp EETTTT-EEEEEEECCSSCCCEEECTTSSCEEEE-----SSSEEEEETTTTEEEEEECSTTT
T ss_pred EECCCC-cEEEEEeCCCCcceeEECCCCCEEEEe-----CCeEEEEECCCCcEeeeeecccc
No 171
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=35.43 E-value=1.4e+02 Score=28.55 Aligned_cols=12 Identities=25% Similarity=0.243 Sum_probs=8.7
Q ss_pred cCCceeeeccCC
Q 043502 291 STGDLYEYDRIS 302 (949)
Q Consensus 291 s~GdLYeYnr~t 302 (949)
.+|.||.||...
T Consensus 128 ~~~~l~~~d~~g 139 (297)
T 3g4e_A 128 HQGALYSLFPDH 139 (297)
T ss_dssp TCEEEEEECTTS
T ss_pred CCcEEEEEECCC
Confidence 457899998654
No 172
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=34.13 E-value=2.9e+02 Score=25.75 Aligned_cols=194 Identities=10% Similarity=0.010 Sum_probs=91.1
Q ss_pred eceeeehhccCceEEEecCCCCc-ceEEEeeccccccccccccccceeEeecceeecC--CcEEEEEecCCceeEeec--
Q 043502 181 NQRILALAEAGVLYQMQLGDNSQ-PIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQD--GERVYFCTKNGLLLELSE-- 255 (949)
Q Consensus 181 n~tilalseag~lyqmql~e~sq-piw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~d--g~~lff~~knG~LLe~te-- 255 (949)
.+.|++-++.|.++-..+..... ++.. +.. ... .|.+=.++.| |..|+.+..+|.+.-+.-
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~----------~~~---~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAV-HAV----------HSA---SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEE-ECC----------CSS---CEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeee-ecC----------CCc---ceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 35667777888777665544321 1111 110 001 1333345667 888888888887755441
Q ss_pred c---CCCccccCCCCCCCceeEEeecccc-----------CCceEEEEccCCceeeeccCCch-hhhh-hcccccccccc
Q 043502 256 V---EPPRWLNHGRPPGANVAAIADAGNV-----------RPEVVYTISSTGDLYEYDRISKP-SWRK-HIWSKGTAANA 319 (949)
Q Consensus 256 l---~p~rW~~hg~PPga~VA~I~D~~~~-----------R~~vVftiss~GdLYeYnr~tkp-sW~k-Hiws~~l~~~~ 319 (949)
. .+.....| ...|.+++=.... ..+.+.+.+.+|.++-||-.+.. .+.. +....|.
T Consensus 135 ~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~---- 206 (379)
T 3jrp_A 135 NGTTSPIIIDAH----AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS---- 206 (379)
T ss_dssp TSCCCEEEEECC----TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----
T ss_pred CCceeeEEecCC----CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc----
Confidence 1 11111122 1223333211110 35788999999999999876531 1110 0111111
Q ss_pred ccccCcccccccccCCceeeEEEEecCCcEEEEEeecc--ceeEEE-cCCCCCCcccccceeccCCccccceEEEEEccc
Q 043502 320 SLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQR--KWKWII-HGSPEDTHLTSITPVQQDESNEKFFSLFLTTSA 396 (949)
Q Consensus 320 sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qr--kWkWi~-HGtP~~~~l~siT~v~~d~~~~~~~sLF~t~S~ 396 (949)
....++ ++++-. ...--|+..+.||.+.=+.+... .+.-.. +...+...++++. +. .++..|+..+.|
T Consensus 207 ~~v~~~--~~sp~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~--~s----~~g~~l~~~~~d 277 (379)
T 3jrp_A 207 DWVRDV--AWSPTV-LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS--WS----LSGNVLALSGGD 277 (379)
T ss_dssp SCEEEE--EECCCC-SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEE--EC----SSSCCEEEEESS
T ss_pred CcEeEE--EECCCC-CCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEE--Ec----CCCCEEEEecCC
Confidence 111111 111110 00112344456777655555432 222111 1222222233322 22 234568888999
Q ss_pred ceEEEEeec
Q 043502 397 GAVFEYQIP 405 (949)
Q Consensus 397 G~Vyey~~~ 405 (949)
|.|+.|.+.
T Consensus 278 g~i~iw~~~ 286 (379)
T 3jrp_A 278 NKVTLWKEN 286 (379)
T ss_dssp SSEEEEEEE
T ss_pred CcEEEEeCC
Confidence 999999983
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=33.84 E-value=5e+02 Score=28.65 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=44.5
Q ss_pred eee----cCCcEEEEEecCCceeEee---ccCCCccccCC-CC-------CCCceeEEeeccccCCceEEEEccCCceee
Q 043502 233 VVS----QDGERVYFCTKNGLLLELS---EVEPPRWLNHG-RP-------PGANVAAIADAGNVRPEVVYTISSTGDLYE 297 (949)
Q Consensus 233 vvs----~dg~~lff~~knG~LLe~t---el~p~rW~~hg-~P-------Pga~VA~I~D~~~~R~~vVftiss~GdLYe 297 (949)
.+| .||+++|.++....-+-+- .+++.+=..-+ .+ |...|++|++.. .++..++.+..+|.+..
T Consensus 246 a~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~-~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASH-YRPEFIVNVKETGKILL 324 (567)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECS-SSSEEEEEETTTTEEEE
T ss_pred EEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcC-CCCEEEEEecCCCeEEE
Confidence 567 5999999998764333332 13332211111 11 233799998864 46889999999999998
Q ss_pred eccCC
Q 043502 298 YDRIS 302 (949)
Q Consensus 298 Ynr~t 302 (949)
.|-.+
T Consensus 325 vd~~~ 329 (567)
T 1qks_A 325 VDYTD 329 (567)
T ss_dssp EETTC
T ss_pred EecCC
Confidence 88654
No 174
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=33.64 E-value=1.1e+02 Score=35.45 Aligned_cols=160 Identities=10% Similarity=0.094 Sum_probs=79.9
Q ss_pred CCCcceeecccCcEEEEecCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEccCceEee--ecCceee
Q 043502 661 ITGKAMKVTAEDALFFVSKNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQ--YNKVTEL 738 (949)
Q Consensus 661 ipG~~~~vt~~dklF~vt~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYE--wNg~TW~ 738 (949)
.||...++..+-.-|.-++.+.-+-..| .|...++=++-+-+ ....+++.+..|.||. +.|.||.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~v~W---------~G~~s~vI~vlt~~----~~~~~~~~t~~ggvyrS~DgG~TW~ 78 (685)
T 3f6k_A 12 VRDFVAKLANNTHQHVFDDLRGSVSLSW---------VGDSTGVILVLTTF----HVPLVIMTFGQSKLYRSEDYGKNFK 78 (685)
T ss_dssp CTTHHHHHHTTEEEEEESCCCSEEEEEE---------CSSSSCCEEEEEEE----CCCC-----CEEEEEEESSTTSSCE
T ss_pred chhhhhhhcCCcceeEEeCCCCeEEEEE---------EcCCCCEEEEEccC----CCCceEEeecCCeEEEEeCCCCCce
Confidence 4666665555544555566555444333 33333333333322 2234577788899999 5666666
Q ss_pred eeecCCCCceeeecCCCceecCCCCCCcceEEEEec------CCCeEEEEEeCCCCeEEeecCCCCCCc-eeecCCCCcc
Q 043502 739 WHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSE------DGGLVEYHWNTWDGWNWVEHGTPGKGV-TLVGSPGPCL 811 (949)
Q Consensus 739 WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~s------nG~LyEr~Wntg~gW~WVdHGtP~~gv-tvv~spG~sf 811 (949)
=.....+ +..+...-.-|+.| .-+.++|+.++ +|+||. .-+.|..|.-+. .|+.+. .+.-.|.
T Consensus 79 ~v~~~~~-~~~~~~~~~IavdP---~dp~~vyvag~~~~~~~~g~v~r-S~DgG~TW~~~~--~p~~~~~~l~~~P~--- 148 (685)
T 3f6k_A 79 DITDLIN-NTFIRTEFGMAIGP---ENSGKVVLTAEVSGGSRGGRIFR-SSDFAKNFVQTD--LPFHPLTQMMYSPQ--- 148 (685)
T ss_dssp ECGGGGT-TCCBCGGGCEEECS---TTCCCEEEEECCCTTCSSCEEEE-ESSTTSSCEEEE--CSSCBSSCCEEETT---
T ss_pred ECcCCCC-CCcccceeEEEECC---CCCCEEEEEEeccCCCCCceEEE-ECCCCceeEecc--CCCCCceEEEEecC---
Confidence 4433222 11111111123333 22345777765 677775 446566788776 555442 2222221
Q ss_pred cCceEEEEecCCceEEEEEeCCcceeeecCCC
Q 043502 812 HGNQLLLIGSDGKVYLRYMDQMTWRWKNCGFP 843 (949)
Q Consensus 812 ~gsqLFviGSDG~LYeRywdg~tWtW~NhG~P 843 (949)
..+.|++.+.+|.+|+-.=.|.+|+=+.-|.+
T Consensus 149 ~~~~l~a~~~~~gly~S~DgG~TW~~i~~~v~ 180 (685)
T 3f6k_A 149 NSDYLLALSTENGLWVSKNFGGKWEEIHKAVC 180 (685)
T ss_dssp EEEEEEEEBTTCCEEEESSTTSSEEEEESSEE
T ss_pred CCCEEEEEECCCCEEEEeCCCCCcEEeecCcc
Confidence 23466777778999873322558886665543
No 175
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=33.55 E-value=3.9e+02 Score=27.11 Aligned_cols=20 Identities=30% Similarity=0.469 Sum_probs=13.3
Q ss_pred eecceeecCCcEEEEEe-cCC
Q 043502 229 IKSGVVSQDGERVYFCT-KNG 248 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~-knG 248 (949)
+.+-..|.||++|+|+. ++|
T Consensus 225 ~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTS
T ss_pred ccCEEEcCCCCEEEEEEecCC
Confidence 34456788999888764 344
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=32.65 E-value=2.8e+02 Score=25.08 Aligned_cols=63 Identities=17% Similarity=0.359 Sum_probs=30.8
Q ss_pred eeecccCcEEEEec-CCeEeEEEEeceeeeeecC---CCCCCcceEEeecccccccCeEEEEc-cCceEeeecCce
Q 043502 666 MKVTAEDALFFVSK-NGRLLQFTVALRKFKWKDC---RHPLDTKVACIVDQELFRENIVFVVG-RNGRLYQYNKVT 736 (949)
Q Consensus 666 ~~vt~~dklF~vt~-~GrLlq~tva~rkwkW~dh---g~PPgTkIata~d~~~~r~~~iFvvG-~NGrLYEwNg~T 736 (949)
+.+..++.+|+++. +++++.+--.......... ..| . ..++++ ++.+|++. .+++|+.|+..+
T Consensus 113 i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p--~--~i~~~~----~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 113 LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDP--D--GVAVDN----SGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSC--C--CEEECT----TCCEEEEEGGGTEEEEECTTT
T ss_pred eEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCc--e--eEEEeC----CCCEEEEECCCCEEEEEecCC
Confidence 34556778888864 5677665221111111111 111 1 122222 34566665 578899876543
No 177
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=31.37 E-value=2.9e+02 Score=25.67 Aligned_cols=65 Identities=17% Similarity=0.093 Sum_probs=37.3
Q ss_pred cceeec-CCcEEEEEecCCceeEee-c-cCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 231 SGVVSQ-DGERVYFCTKNGLLLELS-E-VEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 231 ~gvvs~-dg~~lff~~knG~LLe~t-e-l~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
+..+|. ||+.||.+ +++|.-+. + .+..+=...+..|. .+++-.| -+.+|+.+.+|.++-||..+.
T Consensus 259 ~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~d-----g~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 259 TGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYY-CVAFDKK-----GDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCC-EEEECSS-----SSCEEEESBSSEEEEEETTTT
T ss_pred eeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCcc-ceEECCC-----CCEEEEecCCCeEEEEecccc
Confidence 445678 99999988 66665543 1 11111112232222 2333222 245777888899999998765
No 178
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=30.93 E-value=5.8e+02 Score=28.19 Aligned_cols=121 Identities=7% Similarity=-0.081 Sum_probs=58.8
Q ss_pred CceEEEEccCCceeeeccCCchhhhhhcccccccc--ccccccCcc-cccccccCCceeeEEEEecCCcEEEEEeec--c
Q 043502 283 PEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAA--NASLIPSMA-CTLHGLIGDHSTSLFLLTKGGNLVERRIQQ--R 357 (949)
Q Consensus 283 ~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~--~~sl~~s~g-~t~~gl~g~~S~SLFlltk~G~LVErr~~q--r 357 (949)
.+.+++.+.+|.++-||-.+...-.......|... .....|... ...........--|..-+.||.+.-+.+.. .
T Consensus 113 ~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~ 192 (753)
T 3jro_A 113 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 192 (753)
T ss_dssp CSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT
T ss_pred CCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc
Confidence 46899999999999999776522222222222211 111111100 000000000122345556688877776663 3
Q ss_pred ceeEEEcCCCCCCcccccceeccCCccccceEEEEEcccceEEEEeecc
Q 043502 358 KWKWIIHGSPEDTHLTSITPVQQDESNEKFFSLFLTTSAGAVFEYQIPK 406 (949)
Q Consensus 358 kWkWi~HGtP~~~~l~siT~v~~d~~~~~~~sLF~t~S~G~Vyey~~~k 406 (949)
.++-+..=..+...++++.-. |.. ..+..|+..+.||.|+.|.+..
T Consensus 193 ~~~~~~~~~~h~~~V~~l~~s--p~~-~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 193 TYVLESTLEGHSDWVRDVAWS--PTV-LLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEEC--CCC-SSSEEEEEEESSSCEEEEEESS
T ss_pred cceeeeeecCCCCcEEEEEec--cCC-CCCCEEEEEecCCEEEEecCCC
Confidence 334333222333334444322 211 1135577777799999998854
No 179
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.33 E-value=4.7e+02 Score=26.95 Aligned_cols=66 Identities=17% Similarity=0.264 Sum_probs=33.0
Q ss_pred eeecccCc-EEEEecCC--eEeEEEEeceee--eeecCCCCCCcce-EEeecccccccCeEEEEccCceEeeecC
Q 043502 666 MKVTAEDA-LFFVSKNG--RLLQFTVALRKF--KWKDCRHPLDTKV-ACIVDQELFRENIVFVVGRNGRLYQYNK 734 (949)
Q Consensus 666 ~~vt~~dk-lF~vt~~G--rLlq~tva~rkw--kW~dhg~PPgTkI-ata~d~~~~r~~~iFvvG~NGrLYEwNg 734 (949)
+.+..++. ||+++.++ +++.+.-..... +...+..+.+..+ ..|+++. ++.+|+...+|++|.|+.
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~---~g~lyv~d~~~~I~~~d~ 247 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET---EEWLYFVDSNKNFGRFNV 247 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT---SSEEEEECTTCEEEEEET
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC---CCeEEEEECCCcEEEEEC
Confidence 44555554 67776656 666654332111 1111111111111 2223332 567888888999999653
No 180
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=29.70 E-value=1.3e+02 Score=34.98 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=43.2
Q ss_pred ccCeEEEEcc------CceEee--ecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEecCCCeEEEEEeCCC
Q 043502 716 RENIVFVVGR------NGRLYQ--YNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLSEDGGLVEYHWNTWD 787 (949)
Q Consensus 716 r~~~iFvvG~------NGrLYE--wNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~snG~LyEr~Wntg~ 787 (949)
+.++|++.|. +|.||. +.|.||.-..-..++.. .-++.| ..+..+++.+.+|+||. .-+.|.
T Consensus 101 dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p~~~~~------~l~~~P---~~~~~l~a~~~~~gly~-S~DgG~ 170 (685)
T 3f6k_A 101 NSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLT------QMMYSP---QNSDYLLALSTENGLWV-SKNFGG 170 (685)
T ss_dssp TCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEECSSCBSS------CCEEET---TEEEEEEEEBTTCCEEE-ESSTTS
T ss_pred CCCEEEEEEeccCCCCCceEEEECCCCceeEeccCCCCCce------EEEEec---CCCCEEEEEECCCCEEE-EeCCCC
Confidence 4456777764 789999 78888877653222211 123333 23455677777888886 445566
Q ss_pred CeEEeecCC
Q 043502 788 GWNWVEHGT 796 (949)
Q Consensus 788 gW~WVdHGt 796 (949)
.|.=+.-|.
T Consensus 171 TW~~i~~~v 179 (685)
T 3f6k_A 171 KWEEIHKAV 179 (685)
T ss_dssp SEEEEESSE
T ss_pred CcEEeecCc
Confidence 787665553
No 181
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=28.95 E-value=3.6e+02 Score=25.14 Aligned_cols=64 Identities=11% Similarity=0.094 Sum_probs=36.5
Q ss_pred eeecccCc-EEEEe--cCCeEeEEEEeceeeeeec--CCCCCCcceEEeecccccccCeEEEEccCceEeeecCc
Q 043502 666 MKVTAEDA-LFFVS--KNGRLLQFTVALRKFKWKD--CRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQYNKV 735 (949)
Q Consensus 666 ~~vt~~dk-lF~vt--~~GrLlq~tva~rkwkW~d--hg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEwNg~ 735 (949)
+.+..+++ +|+++ .+++++.+-....+..+.- ++..| ..++.. + .++.+|+...+|+|+.|+-.
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~s--~---dg~~l~~~~~~~~i~~~d~~ 214 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS-TGLALD--S---EGKRLYTTNADGELITIDTA 214 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC-CCCEEE--T---TTTEEEEECTTSEEEEEETT
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc-ceEEEC--C---CCCEEEEEcCCCeEEEEECC
Confidence 44556655 55555 3677877665544444432 33311 112222 1 35679999999999987643
No 182
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=28.88 E-value=1.9e+02 Score=26.74 Aligned_cols=16 Identities=6% Similarity=0.204 Sum_probs=11.2
Q ss_pred EEEEEc-ccceEEEEee
Q 043502 389 SLFLTT-SAGAVFEYQI 404 (949)
Q Consensus 389 sLF~t~-S~G~Vyey~~ 404 (949)
.||+++ .+|.|+.|..
T Consensus 238 ~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGP 254 (314)
T ss_dssp CEEEEEETTTEEEEECT
T ss_pred CEEEEEcCCCEEEEEcC
Confidence 477776 4678888754
No 183
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=28.75 E-value=3.9e+02 Score=25.54 Aligned_cols=215 Identities=11% Similarity=0.065 Sum_probs=0.0
Q ss_pred EEEEeeCCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEe-ccCcEEEEEe-cCCCceeeeccCCCCCceeecC
Q 043502 578 FFLITDGGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVD-LYGSLLIRER-SSNELAWINCTAMRKGRQVIGG 655 (949)
Q Consensus 578 ~fliTd~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd-~~GsL~~R~~-~g~~~~W~n~t~mr~G~~V~~G 655 (949)
|+....||.++=+=...+.-+..-.+|..+..=+...-...||+.. .+|+|.+-.- ++..+.-+....
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~---------- 74 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS---------- 74 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS----------
T ss_pred EEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC----------
Q ss_pred CCCCCCCCcceeecccCc-EEEEecC-CeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEcc-CceEeee
Q 043502 656 PPWDGITGKAMKVTAEDA-LFFVSKN-GRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGR-NGRLYQY 732 (949)
Q Consensus 656 ~pwdgipG~~~~vt~~dk-lF~vt~~-GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~-NGrLYEw 732 (949)
+=..+.+..+++ +|++..+ |.+.-+-....+....-.....-..++..++ ++.+|+++. +|+++-|
T Consensus 75 ------~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~d-----g~~l~~~~~~~~~v~~~ 143 (391)
T 1l0q_A 75 ------SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPD-----GKKLYVTNNGDKTVSVI 143 (391)
T ss_dssp ------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTT-----SSEEEEEETTTTEEEEE
T ss_pred ------CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCC-----CCEEEEEeCCCCEEEEE
Q ss_pred cCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEE-ecCCCeEEEEEeCCCCeEEeecCCCCCCceeecCCCCcc
Q 043502 733 NKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFML-SEDGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSPGPCL 811 (949)
Q Consensus 733 Ng~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~-~snG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~spG~sf 811 (949)
+-.+-.-..-......... .+..|.. ..+|+. +.+|.++-.--.++.--.-+.|+... ..+.-+|
T Consensus 144 d~~~~~~~~~~~~~~~~~~----~~~~~dg----~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~---- 209 (391)
T 1l0q_A 144 NTVTKAVINTVSVGRSPKG----IAVTPDG----TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAP--SGIAVNP---- 209 (391)
T ss_dssp ETTTTEEEEEEECCSSEEE----EEECTTS----SEEEEEETTTTEEEEEETTTTEEEEEEECSSEE--EEEEECT----
T ss_pred ECCCCcEEEEEecCCCcce----EEECCCC----CEEEEEeCCCCEEEEEECCCCeEEEEEecCCCc--cceEECC----
Q ss_pred cCceEEEEe---cCCceEE
Q 043502 812 HGNQLLLIG---SDGKVYL 827 (949)
Q Consensus 812 ~gsqLFviG---SDG~LYe 827 (949)
++.+|++.+ .||.++.
T Consensus 210 ~g~~l~~~~~~~~~~~v~~ 228 (391)
T 1l0q_A 210 EGTKAYVTNVDKYFNTVSM 228 (391)
T ss_dssp TSSEEEEEEECSSCCEEEE
T ss_pred CCCEEEEEecCcCCCcEEE
No 184
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=28.55 E-value=2.2e+02 Score=28.60 Aligned_cols=22 Identities=18% Similarity=0.131 Sum_probs=18.1
Q ss_pred ceEEEEccCCceeeeccCCchh
Q 043502 284 EVVYTISSTGDLYEYDRISKPS 305 (949)
Q Consensus 284 ~vVftiss~GdLYeYnr~tkps 305 (949)
+.|.+-+.+|.++-||..+++.
T Consensus 222 ~~l~~g~~dg~i~~wd~~~~~~ 243 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDGKEL 243 (435)
T ss_dssp TEEEEECSSSBEEEEESSSCBC
T ss_pred CEEEEEeCCCcEeeeccCccee
Confidence 5788889999999999877643
No 185
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=28.40 E-value=5.8e+02 Score=27.39 Aligned_cols=75 Identities=9% Similarity=0.062 Sum_probs=43.0
Q ss_pred eecceeecCCcEEEEEecCCceeEeeccCCCccc--cCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCc
Q 043502 229 IKSGVVSQDGERVYFCTKNGLLLELSEVEPPRWL--NHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 229 ik~gvvs~dg~~lff~~knG~LLe~tel~p~rW~--~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tk 303 (949)
|.+-..|.||..|+-+..+|.+.-.......+.. ..+......|.+++=...-....+++.|.+|.+.-||-.+.
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC
Confidence 3344567889999888888877654322211111 11111222344443222222357889999999999987654
No 186
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=28.09 E-value=3.9e+02 Score=25.24 Aligned_cols=166 Identities=9% Similarity=-0.024 Sum_probs=74.5
Q ss_pred eecCCcEEEEEecCCceeEee-ccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhccc
Q 043502 234 VSQDGERVYFCTKNGLLLELS-EVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWS 312 (949)
Q Consensus 234 vs~dg~~lff~~knG~LLe~t-el~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws 312 (949)
.+.++..++.+..+|.+.-+. +-..+...-. .....|.+|+=... .+.++++.+.+|.++-||-.+...=...+..
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~ 228 (408)
T 4a11_B 152 VSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ--GHRQEILAVSWSPR-YDYILATASADSRVKLWDVRRASGCLITLDQ 228 (408)
T ss_dssp SCSSCCEEEEEESSSSEEEEESSSSCCCEEEC--CCCSCEEEEEECSS-CTTEEEEEETTSCEEEEETTCSSCCSEECCT
T ss_pred CCCCCcEEEEEcCCCeEEEEeCCCcceeeeec--CCCCcEEEEEECCC-CCcEEEEEcCCCcEEEEECCCCCcccccccc
Confidence 345667788888888766554 2111111111 11223444431111 1237889999999999987654100000000
Q ss_pred --c-ccccccccccCcccccccccCCce-eeEEEEecCCcEEEEEeeccceeEEEcCCCCCCcccccceeccCCccccce
Q 043502 313 --K-GTAANASLIPSMACTLHGLIGDHS-TSLFLLTKGGNLVERRIQQRKWKWIIHGSPEDTHLTSITPVQQDESNEKFF 388 (949)
Q Consensus 313 --~-~l~~~~sl~~s~g~t~~gl~g~~S-~SLFlltk~G~LVErr~~qrkWkWi~HGtP~~~~l~siT~v~~d~~~~~~~ 388 (949)
. ...............+..+.=+.. --|+..+.||.+.=+.+...+=.-...+.........+....... ...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 305 (408)
T 4a11_B 229 HNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCG---CSS 305 (408)
T ss_dssp TTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCS---SSS
T ss_pred cccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecC---CCc
Confidence 0 000000000000011111111111 135556678888777766332222222222222222222222222 235
Q ss_pred EEEEEcccceEEEEeec
Q 043502 389 SLFLTTSAGAVFEYQIP 405 (949)
Q Consensus 389 sLF~t~S~G~Vyey~~~ 405 (949)
.+++.+++|.|+.|.+.
T Consensus 306 ~~~~~~~~~~i~v~d~~ 322 (408)
T 4a11_B 306 EFVFVPYGSTIAVYTVY 322 (408)
T ss_dssp CEEEEEETTEEEEEETT
T ss_pred eEEEEecCCEEEEEECc
Confidence 68889999999999884
No 187
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=26.86 E-value=1.7e+02 Score=28.30 Aligned_cols=20 Identities=15% Similarity=0.208 Sum_probs=14.4
Q ss_pred CceEEEEc-cCCceeeeccCC
Q 043502 283 PEVVYTIS-STGDLYEYDRIS 302 (949)
Q Consensus 283 ~~vVftis-s~GdLYeYnr~t 302 (949)
.+.+|+.. .+|+||.+|..+
T Consensus 127 ~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 127 DTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp SSEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEECCCCeEEEEeCCC
Confidence 34466666 599999999764
No 188
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=26.54 E-value=2.6e+02 Score=24.94 Aligned_cols=62 Identities=11% Similarity=0.163 Sum_probs=40.1
Q ss_pred cee--ecCCcEEEEEecCCceeEeeccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhh
Q 043502 232 GVV--SQDGERVYFCTKNGLLLELSEVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWR 307 (949)
Q Consensus 232 gvv--s~dg~~lff~~knG~LLe~tel~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~ 307 (949)
-++ |.+|..-+-...+|.|+-+.. ..+-|.-....|+ .+.+.++..+|.|.=||...++.|.
T Consensus 22 ~l~~~S~~g~~~L~~~~dgnlvly~~-~~~vW~sn~~~~~-------------~~~~l~l~~dGNLVl~d~~~~~lW~ 85 (119)
T 1b2p_A 22 SLEILFGTHVYRFIMQTDCNLVLYDN-NNPIWATNTGGLG-------------NGCRAVLQPDGVLVVITNENVTVWQ 85 (119)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEET-TEEEEECCCTTSC-------------SSCEEEECTTSCEEEECTTCCEEEE
T ss_pred EEEEeCCCCCEEEEEecCCCEEEEEC-CEEEEeCCCccCC-------------CceEEEEccCCEEEEEeCCCcEEEc
Confidence 455 888877766677888764433 4556665444332 1345677888888888876666664
No 189
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=26.48 E-value=1.4e+02 Score=29.95 Aligned_cols=105 Identities=17% Similarity=0.247 Sum_probs=57.8
Q ss_pred ceeEEEecccCchheeeccceeEEEccCCCcccc--------------C-CeEEEEEE--eceeeehhccCceEEEecCC
Q 043502 138 ETSIWVTGVSGSVYERFWNGVQWVIAPHDLPISA--------------G-PAISVFIV--NQRILALAEAGVLYQMQLGD 200 (949)
Q Consensus 138 etsiwvtgesgsiyerfwng~~wviaphdlp~s~--------------g-~ai~vfiv--n~tilalseag~lyqmql~e 200 (949)
...|.+.-..|.+|- +.-||||... | .-++++++ ++.||-+++.|....+.++|
T Consensus 44 ~~~ll~~T~~Gr~~~---------~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e 114 (256)
T 1zvt_A 44 NQPVVFVDSTGRSYA---------IDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFND 114 (256)
T ss_dssp TSCEEEEETTSEEEE---------ECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGG
T ss_pred CCEEEEEeCCCeEEE---------EEHHHCCCcCCCCeEeeeeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHH
Confidence 335666666676653 5667776542 2 23345444 34577788888888888776
Q ss_pred CCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccCCC
Q 043502 201 NSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVEPP 259 (949)
Q Consensus 201 ~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~p~ 259 (949)
-...- .-...-+++++. ...+-. -++..+...|+++|++|++|.|. ++++.
T Consensus 115 ~~~~~----r~G~~~i~L~~~--d~lv~~--~~~~~~~~~i~l~T~~G~~lrf~~~ei~~~ 167 (256)
T 1zvt_A 115 LVARN----RAGKALITLPEN--AHVMPP--VVIEDASDMLLAITQAGRMLMFPVSDLPQL 167 (256)
T ss_dssp GCCCS----TTCEECBCCCTT--CCBCCC--EECCCTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred hcccC----cCceEEEEECCC--CEEEEE--EEecCCCCEEEEEcCCCeEEEEEHHHCCCc
Confidence 31110 111122222221 111111 12323566899999999999998 56554
No 190
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=25.77 E-value=3.7e+02 Score=24.28 Aligned_cols=60 Identities=12% Similarity=0.045 Sum_probs=33.6
Q ss_pred cCcEEEEecCCeEeEEEEece-----------eeeeecCCCCCCcceEEeecccccccCeEEEEccCceEeeecC
Q 043502 671 EDALFFVSKNGRLLQFTVALR-----------KFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGRLYQYNK 734 (949)
Q Consensus 671 ~dklF~vt~~GrLlq~tva~r-----------kwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGrLYEwNg 734 (949)
...|+.++.||.+.-+-.... ..+...|..+ =+.|+..++ -+++.+++.+.||.++-|+-
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~---~~~~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGS-LYSVKFAPA---HLGLKLACLGNDGILRLYDA 141 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSC-EEEEEECCG---GGCSEEEEEETTCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCc-eeEEEEcCC---CCCcEEEEecCCCcEEEecC
Confidence 345667788888766655432 2334444433 122222211 11557888899999888763
No 191
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=25.76 E-value=3.1e+02 Score=26.78 Aligned_cols=24 Identities=25% Similarity=0.480 Sum_probs=17.1
Q ss_pred cce-eecCCcEEEEEec-CCceeEee
Q 043502 231 SGV-VSQDGERVYFCTK-NGLLLELS 254 (949)
Q Consensus 231 ~gv-vs~dg~~lff~~k-nG~LLe~t 254 (949)
+|+ +|.||++||+++. +++|..+.
T Consensus 182 ~~i~~s~dg~~lyv~~~~~~~I~~~d 207 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTKVNRLMRVP 207 (326)
T ss_dssp EEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred CCeEEcCCCCEEEEEECCCCEEEEEE
Confidence 454 5889999999865 46666654
No 192
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=25.48 E-value=5.9e+02 Score=26.50 Aligned_cols=19 Identities=16% Similarity=0.041 Sum_probs=13.3
Q ss_pred EeecceeecCCcEEEEEec
Q 043502 228 QIKSGVVSQDGERVYFCTK 246 (949)
Q Consensus 228 ~ik~gvvs~dg~~lff~~k 246 (949)
.|.+=..|.||++|.|+..
T Consensus 23 ~~~~~~~~~DG~~la~~s~ 41 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGF 41 (582)
T ss_dssp CEEEEEEEETTTEEEEEEE
T ss_pred chheeecCCCCCeEEEEEc
Confidence 3555556788888888765
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=23.73 E-value=4.5e+02 Score=24.52 Aligned_cols=17 Identities=12% Similarity=0.153 Sum_probs=9.8
Q ss_pred cCeEEEEccCceEeeec
Q 043502 717 ENIVFVVGRNGRLYQYN 733 (949)
Q Consensus 717 ~~~iFvvG~NGrLYEwN 733 (949)
++.+++...++++|.|+
T Consensus 183 g~~lv~~~~~~~i~~~~ 199 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYC 199 (296)
T ss_dssp SCEEEEETTTTEEEEEE
T ss_pred CCEEEEeCCCCeEEEEE
Confidence 33454444567888754
No 194
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=23.39 E-value=6.1e+02 Score=25.91 Aligned_cols=112 Identities=13% Similarity=0.248 Sum_probs=0.0
Q ss_pred eEEEEEEeceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEee-----------------cceeec
Q 043502 174 AISVFIVNQRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIK-----------------SGVVSQ 236 (949)
Q Consensus 174 ai~vfivn~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik-----------------~gvvs~ 236 (949)
+.-+|--.+.|..+.-.|.-++.-+.....|+=+.|.+.-+.+---+........+. .|++-+
T Consensus 88 ~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd 167 (386)
T 3v65_B 88 PVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVD 167 (386)
T ss_dssp CEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEE
T ss_pred ceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEE
Q ss_pred -CCcEEEEEecCCceeEeeccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCcee
Q 043502 237 -DGERVYFCTKNGLLLELSEVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLY 296 (949)
Q Consensus 237 -dg~~lff~~knG~LLe~tel~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLY 296 (949)
++.+||+++....-+++..+. |.....+++.+.-+|+=|-+=-..|.||
T Consensus 168 ~~~g~lY~~d~~~~~I~~~~~d-----------g~~~~~l~~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 168 WVHDKLYWTDSGTSRIEVANLD-----------GAHRKVLLWQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp TTTTEEEEEETTTTEEEECBTT-----------SCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred eCCCeEEEEcCCCCeEEEEeCC-----------CCceEEeecCCCCCCcEEEEEcCCCeEE
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=23.12 E-value=7.5e+02 Score=26.85 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=13.6
Q ss_pred cceeecCCcEEEEEecC
Q 043502 231 SGVVSQDGERVYFCTKN 247 (949)
Q Consensus 231 ~gvvs~dg~~lff~~kn 247 (949)
+..+|.||+.|+|...+
T Consensus 237 ~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIRE 253 (710)
T ss_dssp EEEECTTSCEEEEEEEC
T ss_pred EEEEcCCCCEEEEEEEc
Confidence 44689999999998763
No 196
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=23.05 E-value=5.4e+02 Score=25.19 Aligned_cols=119 Identities=9% Similarity=0.024 Sum_probs=66.5
Q ss_pred cCCeEEEEEE----eceeeehhccCceEEEecCCCCcceEEEeeccccccccccccccceeEeecceeecCCcEEEEEec
Q 043502 171 AGPAISVFIV----NQRILALAEAGVLYQMQLGDNSQPIWVEFIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTK 246 (949)
Q Consensus 171 ~g~ai~vfiv----n~tilalseag~lyqmql~e~sqpiw~ef~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~k 246 (949)
.+.++++-.. ++.|++-+..|.++-..+.. .+++.+--.+. .+. .|.+=.++.||..|+.++.
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~---------h~~---~v~~~~~s~~~~~l~s~~~ 234 (437)
T 3gre_A 168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT-LERLQIIENSP---------RHG---AVSSICIDEECCVLILGTT 234 (437)
T ss_dssp CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT-CCEEEEEECCG---------GGC---CEEEEEECTTSCEEEEEET
T ss_pred ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CeeeEEEccCC---------CCC---ceEEEEECCCCCEEEEEcC
Confidence 3455555544 66777788888887776643 33443321110 011 2333346888999998998
Q ss_pred CCceeEeeccCCCccccC-CCCCCCceeEEeeccccCC--ceEEEEccCCceeeeccCCc
Q 043502 247 NGLLLELSEVEPPRWLNH-GRPPGANVAAIADAGNVRP--EVVYTISSTGDLYEYDRISK 303 (949)
Q Consensus 247 nG~LLe~tel~p~rW~~h-g~PPga~VA~I~D~~~~R~--~vVftiss~GdLYeYnr~tk 303 (949)
+|.+.-.. ++..+-... ..+....|-+|+-...+-| ..+.+.+.+|.++-||-.+.
T Consensus 235 dg~i~iwd-~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 235 RGIIDIWD-IRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp TSCEEEEE-TTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred CCeEEEEE-cCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 88765543 221111110 0022234666644333332 37888888999999997654
No 197
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=22.93 E-value=8.5e+02 Score=27.42 Aligned_cols=54 Identities=7% Similarity=0.059 Sum_probs=29.7
Q ss_pred ceEEEEecCCCeEEEEEeCCCCeE-Eeec----CCCCCCceeecCCCCcccCceEEEEecCCceEEEE
Q 043502 767 GSLFMLSEDGGLVEYHWNTWDGWN-WVEH----GTPGKGVTLVGSPGPCLHGNQLLLIGSDGKVYLRY 829 (949)
Q Consensus 767 gslFm~~snG~LyEr~Wntg~gW~-WVdH----GtP~~gvtvv~spG~sf~gsqLFviGSDG~LYeRy 829 (949)
++||+.++..+-.+++--.|..=+ .+.. +.|. +++ +++.+||++...++.-.|+
T Consensus 552 ~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~-gla--------vd~~~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 552 GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF-SLA--------VFEDKVFWTDIINEAIFSA 610 (699)
T ss_dssp CCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCC-CCE--------EETTEEEEECSTTTCEEEE
T ss_pred CEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCce-EeE--------EECCEEEEEeCCCCeEEEE
Confidence 578888877777776654343222 3321 2343 333 3445777777665544444
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=22.65 E-value=4.3e+02 Score=23.92 Aligned_cols=225 Identities=8% Similarity=0.032 Sum_probs=0.0
Q ss_pred EEecCceEEEEee-CCeeEEEEecCCEEEEEecCCCCCccccccccccceEEEeccCcEEEEEecCCCceeeeccCCCCC
Q 043502 571 VMHGSRSFFLITD-GGFTFEYLYAESVWLWLRHDHSTPMRGVLGNYNGSLYMVDLYGSLLIRERSSNELAWINCTAMRKG 649 (949)
Q Consensus 571 vmh~~~s~fliTd-~G~~fE~~~~~~~WlWl~H~h~T~m~g~~g~~ngsLf~vd~~GsL~~R~~~g~~~~W~n~t~mr~G 649 (949)
....++.+|+.+. +|.++-+--.+..=.+.-......+.+..-.-+|.||+.+..+.-..+.-......-+.. +..
T Consensus 63 ~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~---~~~ 139 (299)
T 2z2n_A 63 TISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYEL---PNK 139 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEC---SST
T ss_pred EECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecC---CCC
Q ss_pred ceeecCCCCCCCCCcceeecccCcEEEEec-CCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEccCce
Q 043502 650 RQVIGGPPWDGITGKAMKVTAEDALFFVSK-NGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVGRNGR 728 (949)
Q Consensus 650 ~~V~~G~pwdgipG~~~~vt~~dklF~vt~-~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGr 728 (949)
..-..+ +.+..++.+|+++. +++++.+.. ..+++-.....+...-...++|+. ++.+++...+++
T Consensus 140 ~~~~~~----------i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~---g~l~v~~~~~~~ 205 (299)
T 2z2n_A 140 GSYPSF----------ITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGND---DALWFVEIIGNK 205 (299)
T ss_dssp TCCEEE----------EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT---SSEEEEETTTTE
T ss_pred CCCCce----------EEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC---CCEEEEccCCce
Q ss_pred EeeecCceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEEe-cCCCeEEEEEeCCCCeEEeecCCCCCCceeecCC
Q 043502 729 LYQYNKVTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFMLS-EDGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGSP 807 (949)
Q Consensus 729 LYEwNg~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~~-snG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~sp 807 (949)
|+.++. +-.....-.|.+. .........-.+.+|+.+ .+++|+..-- .+.-=.+.-.+.-.....+.- +
T Consensus 206 i~~~~~-~g~~~~~~~~~~~-------~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~ 275 (299)
T 2z2n_A 206 IGRITT-SGEITEFKIPTPN-------ARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-D 275 (299)
T ss_dssp EEEECT-TCCEEEEECSSTT-------CCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-C
T ss_pred EEEECC-CCcEEEEECCCCC-------CCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-c
Q ss_pred CCcccCceEEEEecCCceEE
Q 043502 808 GPCLHGNQLLLIGSDGKVYL 827 (949)
Q Consensus 808 G~sf~gsqLFviGSDG~LYe 827 (949)
. .+|++.+++|.+++
T Consensus 276 ~-----g~l~v~~~~~~l~~ 290 (299)
T 2z2n_A 276 G-----ETIWFAMECDKIGK 290 (299)
T ss_dssp S-----SCEEEEETTTEEEE
T ss_pred C-----CCEEEEecCCcEEE
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=22.48 E-value=7.9e+02 Score=26.90 Aligned_cols=67 Identities=18% Similarity=0.311 Sum_probs=42.5
Q ss_pred eeecCCcEEEEEec----CCceeEeec--cCCCccccCCCCCCCceeEEeeccccCCceEEEEccCC--ceeeeccCCc
Q 043502 233 VVSQDGERVYFCTK----NGLLLELSE--VEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTG--DLYEYDRISK 303 (949)
Q Consensus 233 vvs~dg~~lff~~k----nG~LLe~te--l~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~G--dLYeYnr~tk 303 (949)
.+++||.+|||.+. +++|..+.. -++-.|+.- -|...++ + +.......+||+..++| +||.+|..++
T Consensus 286 ~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~--~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 286 LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL-IPERQQV--L-TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-ECCCSSC--E-EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE-ecCCCCE--E-EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 37899999999985 467877652 122235432 1222222 2 44555667888888887 7999987765
No 200
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=22.42 E-value=5.2e+02 Score=24.76 Aligned_cols=97 Identities=13% Similarity=0.055 Sum_probs=48.4
Q ss_pred ccCeEEEEccCceEeeecC--ceeeeeecCCCCceeeecCCCceecCCCCCCcceEEEE-ecCCCeEEEEEeCCCCe---
Q 043502 716 RENIVFVVGRNGRLYQYNK--VTELWHEHYQSQHLVLSILPGTAMRPPSASLTGSLFML-SEDGGLVEYHWNTWDGW--- 789 (949)
Q Consensus 716 r~~~iFvvG~NGrLYEwNg--~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~gslFm~-~snG~LyEr~Wntg~gW--- 789 (949)
.++.+...+.||.++-|+- ....-...+..... +. ..+..| .+.+|+. +.||.+ +.|+..++=
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~-i~---~~~~~p-----dg~~lasg~~dg~i--~iwd~~~~~~~~ 206 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVE-YS---SGVLHK-----DSLLLALYSPDGIL--DVYNLSSPDQAS 206 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCC-CC---EEEECT-----TSCEEEEECTTSCE--EEEESSCTTSCC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCc-eE---EEEECC-----CCCEEEEEcCCCEE--EEEECCCCCCCc
Confidence 3455666888998776542 22222111111111 11 134444 2446665 667766 457654431
Q ss_pred -EEee-cCCCCCCceeecCCCCcccCceEEEEecCCceEEEEEeC
Q 043502 790 -NWVE-HGTPGKGVTLVGSPGPCLHGNQLLLIGSDGKVYLRYMDQ 832 (949)
Q Consensus 790 -~WVd-HGtP~~gvtvv~spG~sf~gsqLFviGSDG~LYeRywdg 832 (949)
.+.. |..|.. .+.=+| +++.++.++|+ .-|.||-
T Consensus 207 ~~~~~~h~~~v~--~l~fs~-----~g~~l~s~~~~--~v~iwd~ 242 (343)
T 3lrv_A 207 SRFPVDEEAKIK--EVKFAD-----NGYWMVVECDQ--TVVCFDL 242 (343)
T ss_dssp EECCCCTTSCEE--EEEECT-----TSSEEEEEESS--BEEEEET
T ss_pred cEEeccCCCCEE--EEEEeC-----CCCEEEEEeCC--eEEEEEc
Confidence 3434 555542 222122 35677777788 6788984
No 201
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=22.20 E-value=78 Score=34.98 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=36.2
Q ss_pred CCCcceeecccCcEEEEecCCeEeEEEE--ecee----ee-eecCCCCCCcceEEeecccccccCeEEEEccCce
Q 043502 661 ITGKAMKVTAEDALFFVSKNGRLLQFTV--ALRK----FK-WKDCRHPLDTKVACIVDQELFRENIVFVVGRNGR 728 (949)
Q Consensus 661 ipG~~~~vt~~dklF~vt~~GrLlq~tv--a~rk----wk-W~dhg~PPgTkIata~d~~~~r~~~iFvvG~NGr 728 (949)
.||.... .+++++.+.||-|.=..+ .+++ -. -.+++.++|..+.......++++++|+|+|.+|-
T Consensus 255 ~pG~i~~---~~~~~v~~~~g~~~i~~~q~~g~~~m~a~d~l~g~~l~~g~~l~~~~~~~~~~~~~VLVTGatG~ 326 (660)
T 1z7e_A 255 QPGSVIS---VAPLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGF 326 (660)
T ss_dssp CTTSEEE---ETTEEEECSBSEEEECEEEETTSCCEEHHHHHHTTTCSSSCCC---------CCEEEEEETTTSH
T ss_pred CCcEEEe---cCcEEEEeCCCeEEEEEeccCCCCcccHHHHHhhcCCCCCcccCCCcchhhccCceEEEEcCCcH
Confidence 4777663 346999999996443222 2211 11 2345667788876655566677789999999996
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=21.10 E-value=6.7e+02 Score=25.58 Aligned_cols=13 Identities=15% Similarity=0.396 Sum_probs=11.9
Q ss_pred eeecCCcEEEEEe
Q 043502 233 VVSQDGERVYFCT 245 (949)
Q Consensus 233 vvs~dg~~lff~~ 245 (949)
.+|.||++||+++
T Consensus 72 ~~spDg~~lyv~n 84 (373)
T 2mad_H 72 VAAHSGSEFALAS 84 (373)
T ss_pred EECCCCCEEEEEe
Confidence 4799999999998
No 203
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=20.87 E-value=42 Score=28.55 Aligned_cols=15 Identities=7% Similarity=0.315 Sum_probs=13.0
Q ss_pred eEEEecCCceeeEEE
Q 043502 906 VIFDLRDGRLGEMRR 920 (949)
Q Consensus 906 V~felrDGrl~E~~~ 920 (949)
-+|+++||+++|++-
T Consensus 95 ~vf~~~dGkI~e~~~ 109 (112)
T 3f14_A 95 DIYRFENDTIKTITS 109 (112)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EEEEEeCCEEEEEEE
Confidence 489999999999874
No 204
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=20.71 E-value=1e+03 Score=28.26 Aligned_cols=145 Identities=12% Similarity=0.150 Sum_probs=0.0
Q ss_pred eceeeehhccCceEEEecCCCCcceEEE-eeccccccccccccccceeEeecceeecCCcEEEEEecCCceeEee--ccC
Q 043502 181 NQRILALAEAGVLYQMQLGDNSQPIWVE-FIPAIDQSINGEAEQRSVIQIKSGVVSQDGERVYFCTKNGLLLELS--EVE 257 (949)
Q Consensus 181 n~tilalseag~lyqmql~e~sqpiw~e-f~~~~~~~~~~~~~qs~~~~ik~gvvs~dg~~lff~~knG~LLe~t--el~ 257 (949)
+++||.++..|.+|++...|-..- .. =.|-.+-....+.++-.+|..-. +...|+|+|++|..-... ++.
T Consensus 514 ~d~ll~ft~~Gr~y~~~~~~lP~~--~~~G~~i~~ll~l~~~e~i~~~~~~~-----~~~~l~~~T~~G~vk~~~l~~~~ 586 (716)
T 1zvu_A 514 NQPVVFVDSTGRSYAIDPITLPSA--RGQGEPLTGKLTLPPGATVDHMLMES-----DDQKLLMASDAGYGFVCTFNDLV 586 (716)
T ss_dssp SSCEEEEETTSEEEEECTTTSCCC--C---CBSTTTSCCCTTCCEEEEECCC-----TTCEEEEEBTTSEEEEEEGGGGC
T ss_pred CCEEEEEecCCcEEEEEeeecccc--cccCeeHHhccCCCCCCeEEEEEEec-----CCceEEEEeCCceEEEecHHHhc
Q ss_pred CCc---cccCCCCCCCceeEEeecccc--CCceEEEEccCCceeeeccCCchhhhhhccccccccccccccCcccccccc
Q 043502 258 PPR---WLNHGRPPGANVAAIADAGNV--RPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTAANASLIPSMACTLHGL 332 (949)
Q Consensus 258 p~r---W~~hg~PPga~VA~I~D~~~~--R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~~~~sl~~s~g~t~~gl 332 (949)
..| ..--.-..|..+ +++... -.+-|+.++++|++.-|+-..- +..+.+.|-....|
T Consensus 587 ~~~~~g~~ai~L~~~d~l---v~~~~~~~~~~~v~l~t~~g~~lrf~~~~v---------------~~~gr~~GV~~i~l 648 (716)
T 1zvu_A 587 ARNRAGKALITLPENAHV---MPPVVIEDASDMLLAITQAGRMLMFPVSDL---------------PQLSKGKGNKIINI 648 (716)
T ss_dssp CCSTTCEECBCCCTTCCB---CCCEECCCTTCEEEEEETTSEEEEEESTTS---------------CBCSSBSCEESSCC
T ss_pred ccCccceEEEeeCCCCEE---EEEEEecCCCCEEEEEeCCCeEEEEEHHHC---------------CccCcccCeEEEEe
Q ss_pred c-------CCceeeEEEEecCCcEE
Q 043502 333 I-------GDHSTSLFLLTKGGNLV 350 (949)
Q Consensus 333 ~-------g~~S~SLFlltk~G~LV 350 (949)
. |+.-+++..++++..|+
T Consensus 649 ~~~~~k~~~d~v~~~~~~~~~~~l~ 673 (716)
T 1zvu_A 649 PSAEAARGEDGLAQLYVLPPQSTLT 673 (716)
T ss_dssp CHHHHHTTSSCEEEEEEECSSCCEE
T ss_pred cccccCCCCCEEEEEEEecCCCeEE
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=20.66 E-value=4.3e+02 Score=28.20 Aligned_cols=142 Identities=14% Similarity=0.076 Sum_probs=0.0
Q ss_pred CCcEEEEEecCCceeEeeccCCCccccCCCCCCCceeEEeeccccCCceEEEEccCCceeeeccCCchhhhhhccccccc
Q 043502 237 DGERVYFCTKNGLLLELSEVEPPRWLNHGRPPGANVAAIADAGNVRPEVVYTISSTGDLYEYDRISKPSWRKHIWSKGTA 316 (949)
Q Consensus 237 dg~~lff~~knG~LLe~tel~p~rW~~hg~PPga~VA~I~D~~~~R~~vVftiss~GdLYeYnr~tkpsW~kHiws~~l~ 316 (949)
||..|+.+ ++..|.+-+++.+. .+..=+..+.+ |.|.-...|+ +.+++.+|.||-||-.+. ++.
T Consensus 96 d~~~L~v~--~~~~l~v~dv~sl~--~~~~~~~~~~~-v~~i~~~~p~-~av~~~dG~L~v~dl~~~----------~~~ 159 (388)
T 1xip_A 96 HGDQVLVS--TRNALYSLDLEELS--EFRTVTSFEKP-VFQLKNVNNT-LVILNSVNDLSALDLRTK----------STK 159 (388)
T ss_dssp ETTEEEEE--ESSEEEEEESSSTT--CEEEEEECSSC-EEEEEECSSE-EEEEETTSEEEEEETTTC----------CEE
T ss_pred CCCEEEEE--cCCcEEEEEchhhh--ccCccceeecc-eeeEEecCCC-EEEEECCCCEEEEEccCC----------ccc
Q ss_pred cccccccCcccccccccCCceeeEEEEecCCcEEEEEeeccc---eeEE-------EcCCCCCCccccccee--------
Q 043502 317 ANASLIPSMACTLHGLIGDHSTSLFLLTKGGNLVERRIQQRK---WKWI-------IHGSPEDTHLTSITPV-------- 378 (949)
Q Consensus 317 ~~~sl~~s~g~t~~gl~g~~S~SLFlltk~G~LVErr~~qrk---WkWi-------~HGtP~~~~l~siT~v-------- 378 (949)
. +.+...|.--+-.| +.+..++|.++=|...... =+=| +| .++..++.||+-.
T Consensus 160 ~---~~~~Vs~v~WSpkG-----~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~-~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 160 Q---LAQNVTSFDVTNSQ-----LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEEL-PVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp E---EEESEEEEEECSSE-----EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTS-CTTTSEEEEEEESSSSEEEEE
T ss_pred c---ccCCceEEEEcCCc-----eEEEEcCCcEEEEcCCCccccccceecCCcccccc-cCCCeeEEEEEEecCCeEEEE
Q ss_pred --ccCCcccc----ceEEEEEcccceEEEEe
Q 043502 379 --QQDESNEK----FFSLFLTTSAGAVFEYQ 403 (949)
Q Consensus 379 --~~d~~~~~----~~sLF~t~S~G~Vyey~ 403 (949)
..++..+. ...+|+++....-|.|+
T Consensus 231 y~~~~~~~~~~~~~~~~~~ii~~~~~~~~f~ 261 (388)
T 1xip_A 231 FGNVISETDDEVSYDQKMYIIKHIDGSASFQ 261 (388)
T ss_dssp EECCCCSSCSSCCCCEEEEEEEEETTEEEEE
T ss_pred EcCCCCCcCcccCCcceEEEEEcCCCCceeE
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=20.65 E-value=4.8e+02 Score=23.65 Aligned_cols=61 Identities=13% Similarity=0.231 Sum_probs=30.4
Q ss_pred eecccCcEEEEec-CCeEeEEEEeceeeeeecCCCCC-Ccce-EEeecccccccCeEEEEc-cCceEeeecC
Q 043502 667 KVTAEDALFFVSK-NGRLLQFTVALRKFKWKDCRHPL-DTKV-ACIVDQELFRENIVFVVG-RNGRLYQYNK 734 (949)
Q Consensus 667 ~vt~~dklF~vt~-~GrLlq~tva~rkwkW~dhg~PP-gTkI-ata~d~~~~r~~~iFvvG-~NGrLYEwNg 734 (949)
.+..++++|+++. +++++.+... .+++-.. .|. ...+ ..++| .++.+|+.. .+++|+.++.
T Consensus 152 ~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~--~~~~~~~~~~i~~d----~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 152 TLGSDNALWFTENQNNSIGRITNT-GKLEEYP--LPTNAAAPVGITSG----NDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp EECTTSSEEEEETTTTEEEEECTT-CCEEEEE--CSSTTCCEEEEEEC----TTSSEEEEETTTTEEEEECT
T ss_pred EECCCCCEEEEecCCCeEEEECCC-CcEEEee--CCCCCCCcceEEEC----CCCCEEEEccCCCEEEEEcC
Confidence 4456777888776 5667665442 2222111 121 1222 22222 234555554 5678998764
No 207
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=20.55 E-value=44 Score=28.54 Aligned_cols=17 Identities=24% Similarity=0.614 Sum_probs=14.5
Q ss_pred cceEEEEeCCCceeecc
Q 043502 442 VGRTIFPLDDGRLAELH 458 (949)
Q Consensus 442 ~grviF~L~DGRLaELh 458 (949)
.+-.+|.++|||++|++
T Consensus 110 ~~~~~~~~~dGkI~~~~ 126 (140)
T 3i0y_A 110 PGGAFFDVRDGQITRVT 126 (140)
T ss_dssp EEEEEEEEETTEEEEEE
T ss_pred EeeEEEEEECCEEEEEE
Confidence 46679999999999975
No 208
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=20.34 E-value=6e+02 Score=24.73 Aligned_cols=198 Identities=11% Similarity=0.042 Sum_probs=0.0
Q ss_pred cccccccccceEEEec----------------------------cCcEEEEEecCCCceeeeccCCCCCceeecCCCCCC
Q 043502 609 RGVLGNYNGSLYMVDL----------------------------YGSLLIRERSSNELAWINCTAMRKGRQVIGGPPWDG 660 (949)
Q Consensus 609 ~g~~g~~ngsLf~vd~----------------------------~GsL~~R~~~g~~~~W~n~t~mr~G~~V~~G~pwdg 660 (949)
+|-.|.++++|.++|. .+.|++=-..++.+.-++-..++.-.++-.+
T Consensus 9 eg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~----- 83 (328)
T 3dsm_A 9 EGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGF----- 83 (328)
T ss_dssp CCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECC-----
T ss_pred cCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCC-----
Q ss_pred CCCcceeecccCcEEEEe-cCCeEeEEEEeceeeeeecCCCCCCcceEEeecccccccCeEEEEc--cCceEee---ecC
Q 043502 661 ITGKAMKVTAEDALFFVS-KNGRLLQFTVALRKFKWKDCRHPLDTKVACIVDQELFRENIVFVVG--RNGRLYQ---YNK 734 (949)
Q Consensus 661 ipG~~~~vt~~dklF~vt-~~GrLlq~tva~rkwkW~dhg~PPgTkIata~d~~~~r~~~iFvvG--~NGrLYE---wNg 734 (949)
-....+-+..++++|+++ .+++|+.+-..+.+..+.----............++ .++++||.. .+++++- -++
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC
Q ss_pred ceeeeeecCCCCceeeecCCCceecCCCCCCc--------ceEEEEecCCCeEEEEEeCCCCeEEeecCCCCCCceeecC
Q 043502 735 VTELWHEHYQSQHLVLSILPGTAMRPPSASLT--------GSLFMLSEDGGLVEYHWNTWDGWNWVEHGTPGKGVTLVGS 806 (949)
Q Consensus 735 ~TW~WhdHGkP~~t~ls~~pGtAM~psk~sl~--------gslFm~~snG~LyEr~Wntg~gW~WVdHGtP~~gvtvv~s 806 (949)
.-..-..-|.-++.+.....|........... .++++.+.+.+-.++.+....| ..| ..+.-+
T Consensus 163 ~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g------~~p---~~la~~ 233 (328)
T 3dsm_A 163 KVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG------DWP---SEVQLN 233 (328)
T ss_dssp EEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT------CCC---EEEEEC
T ss_pred eEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC------CCc---eeEEEe
Q ss_pred CCCcccCceEEEEecCCceEE
Q 043502 807 PGPCLHGNQLLLIGSDGKVYL 827 (949)
Q Consensus 807 pG~sf~gsqLFviGSDG~LYe 827 (949)
| ++..||+..+ .+|.
T Consensus 234 ~----d~~~lyv~~~--~v~~ 248 (328)
T 3dsm_A 234 G----TRDTLYWINN--DIWR 248 (328)
T ss_dssp T----TSCEEEEESS--SEEE
T ss_pred c----CCCEEEEEcc--EEEE
No 209
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=20.16 E-value=5.8e+02 Score=24.45 Aligned_cols=19 Identities=16% Similarity=0.212 Sum_probs=14.6
Q ss_pred ccCeEEEEccCceEeeecC
Q 043502 716 RENIVFVVGRNGRLYQYNK 734 (949)
Q Consensus 716 r~~~iFvvG~NGrLYEwNg 734 (949)
.++.+++.+.||.++-|+-
T Consensus 174 ~~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 174 SRQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp TTTEEEEEETTSEEEEEET
T ss_pred CCCEEEEECCCCCEEEEEC
Confidence 3567888888999888764
Done!