Query 043503
Match_columns 430
No_of_seqs 350 out of 2517
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 09:27:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vl5_A Unknown conserved prote 99.7 3.3E-16 1.1E-20 149.1 16.8 127 276-407 37-190 (260)
2 3g5l_A Putative S-adenosylmeth 99.7 8E-16 2.7E-20 145.7 17.7 140 266-410 34-219 (253)
3 3ujc_A Phosphoethanolamine N-m 99.7 9.1E-16 3.1E-20 145.3 17.5 139 265-406 44-205 (266)
4 1pjz_A Thiopurine S-methyltran 99.7 1.1E-16 3.9E-21 148.2 11.0 128 278-409 24-178 (203)
5 3h2b_A SAM-dependent methyltra 99.7 4.8E-16 1.7E-20 142.2 14.3 126 279-407 44-182 (203)
6 3hnr_A Probable methyltransfer 99.6 1.9E-15 6.5E-20 139.7 14.5 126 278-407 47-201 (220)
7 2p7i_A Hypothetical protein; p 99.6 3.8E-15 1.3E-19 139.0 16.4 134 263-405 32-197 (250)
8 1xxl_A YCGJ protein; structura 99.6 3.9E-15 1.3E-19 140.5 16.5 124 278-406 23-173 (239)
9 1xtp_A LMAJ004091AAA; SGPP, st 99.6 2.7E-15 9.2E-20 141.5 15.2 140 265-407 82-238 (254)
10 3e23_A Uncharacterized protein 99.6 1.3E-15 4.4E-20 140.4 12.5 140 264-409 33-184 (211)
11 3bus_A REBM, methyltransferase 99.6 7.4E-15 2.5E-19 140.4 17.7 138 265-407 50-216 (273)
12 4gek_A TRNA (CMO5U34)-methyltr 99.6 3E-15 1E-19 144.8 14.8 98 279-381 73-181 (261)
13 3dli_A Methyltransferase; PSI- 99.6 4.4E-15 1.5E-19 139.8 15.4 124 278-406 43-183 (240)
14 3dh0_A SAM dependent methyltra 99.6 4.4E-15 1.5E-19 137.2 15.0 123 278-405 39-179 (219)
15 1nkv_A Hypothetical protein YJ 99.6 3.8E-15 1.3E-19 140.9 14.9 135 265-405 25-185 (256)
16 3dtn_A Putative methyltransfer 99.6 1.1E-14 3.7E-19 136.1 17.7 125 277-405 45-212 (234)
17 2o57_A Putative sarcosine dime 99.6 5.7E-15 1.9E-19 143.2 16.2 125 277-406 83-233 (297)
18 3sm3_A SAM-dependent methyltra 99.6 3E-15 1E-19 138.9 13.6 142 278-421 32-222 (235)
19 4hg2_A Methyltransferase type 99.6 7.5E-16 2.6E-20 148.8 9.8 108 265-380 30-137 (257)
20 3l8d_A Methyltransferase; stru 99.6 7.7E-15 2.6E-19 137.4 16.4 123 278-405 55-198 (242)
21 3vc1_A Geranyl diphosphate 2-C 99.6 8.8E-15 3E-19 143.7 16.9 135 266-406 106-268 (312)
22 3ou2_A SAM-dependent methyltra 99.6 9.3E-15 3.2E-19 134.2 15.9 127 278-408 48-206 (218)
23 3kkz_A Uncharacterized protein 99.6 1.4E-14 4.8E-19 138.5 17.5 136 265-406 34-195 (267)
24 4htf_A S-adenosylmethionine-de 99.6 7.9E-15 2.7E-19 141.6 15.8 136 265-406 58-231 (285)
25 3dlc_A Putative S-adenosyl-L-m 99.6 4.1E-15 1.4E-19 136.3 12.8 135 265-405 33-201 (219)
26 3lcc_A Putative methyl chlorid 99.6 8.7E-15 3E-19 137.2 14.6 129 278-410 68-210 (235)
27 3e8s_A Putative SAM dependent 99.6 5.7E-15 2E-19 136.1 12.7 126 278-409 54-211 (227)
28 1kpg_A CFA synthase;, cyclopro 99.6 2.1E-14 7.2E-19 138.5 17.1 136 265-406 53-227 (287)
29 3g2m_A PCZA361.24; SAM-depende 99.6 6.4E-15 2.2E-19 143.6 13.4 99 279-380 85-192 (299)
30 3ege_A Putative methyltransfer 99.6 7.5E-15 2.6E-19 140.5 13.6 124 276-406 34-177 (261)
31 3bkw_A MLL3908 protein, S-aden 99.6 2.1E-14 7.2E-19 134.3 16.3 126 277-407 44-214 (243)
32 3f4k_A Putative methyltransfer 99.6 2.9E-14 9.8E-19 134.8 16.9 135 265-405 34-194 (257)
33 3ccf_A Cyclopropane-fatty-acyl 99.6 1.8E-14 6.2E-19 138.8 15.5 123 278-406 59-209 (279)
34 3pfg_A N-methyltransferase; N, 99.6 1.8E-14 6.2E-19 137.3 15.1 98 278-378 52-151 (263)
35 2p35_A Trans-aconitate 2-methy 99.6 3.5E-14 1.2E-18 134.2 16.4 135 265-405 22-188 (259)
36 2p8j_A S-adenosylmethionine-de 99.6 7.6E-15 2.6E-19 134.4 11.3 147 278-427 25-203 (209)
37 2ex4_A Adrenal gland protein A 99.6 2.5E-14 8.6E-19 134.7 14.9 128 277-407 80-225 (241)
38 2gb4_A Thiopurine S-methyltran 99.6 2.2E-14 7.7E-19 137.9 14.7 125 278-406 70-226 (252)
39 2yqz_A Hypothetical protein TT 99.6 4.5E-14 1.5E-18 133.6 16.1 123 277-405 40-194 (263)
40 4fsd_A Arsenic methyltransfera 99.6 2.8E-14 9.6E-19 144.7 15.4 124 278-406 85-250 (383)
41 3mgg_A Methyltransferase; NYSG 99.6 5.8E-14 2E-18 134.5 16.8 124 277-405 38-196 (276)
42 3jwg_A HEN1, methyltransferase 99.6 3.8E-14 1.3E-18 131.2 14.5 129 278-409 31-194 (219)
43 3hem_A Cyclopropane-fatty-acyl 99.5 1.2E-13 4.2E-18 134.6 18.1 137 265-406 61-242 (302)
44 3i9f_A Putative type 11 methyl 99.5 1.2E-14 4.1E-19 129.2 9.8 119 278-406 19-147 (170)
45 2xvm_A Tellurite resistance pr 99.5 8.1E-14 2.8E-18 126.1 15.0 124 278-407 34-173 (199)
46 3jwh_A HEN1; methyltransferase 99.5 4.2E-14 1.4E-18 130.9 13.2 129 278-409 31-194 (217)
47 3cgg_A SAM-dependent methyltra 99.5 6.3E-14 2.1E-18 125.8 13.9 126 278-407 48-175 (195)
48 3gu3_A Methyltransferase; alph 99.5 5.6E-14 1.9E-18 136.1 14.4 124 278-407 24-190 (284)
49 2fk8_A Methoxy mycolic acid sy 99.5 6.9E-14 2.4E-18 137.2 15.0 135 265-405 79-252 (318)
50 1ve3_A Hypothetical protein PH 99.5 1.4E-13 4.7E-18 127.4 15.6 110 265-379 29-143 (227)
51 3cc8_A Putative methyltransfer 99.5 1.8E-13 6.2E-18 126.2 15.9 132 268-406 25-184 (230)
52 3ofk_A Nodulation protein S; N 99.5 6.9E-14 2.4E-18 129.0 12.7 105 272-379 47-155 (216)
53 1y8c_A S-adenosylmethionine-de 99.5 9.1E-14 3.1E-18 129.7 13.0 97 278-377 39-141 (246)
54 2kw5_A SLR1183 protein; struct 99.5 1.6E-13 5.4E-18 125.3 14.1 123 279-408 32-172 (202)
55 3bxo_A N,N-dimethyltransferase 99.5 1.4E-13 4.7E-18 128.4 13.9 99 278-379 42-142 (239)
56 2aot_A HMT, histamine N-methyl 99.5 1.5E-13 5E-18 133.7 14.5 126 277-407 53-221 (292)
57 2a14_A Indolethylamine N-methy 99.5 4E-14 1.4E-18 135.9 10.1 129 277-407 56-238 (263)
58 3ocj_A Putative exported prote 99.5 5.4E-14 1.8E-18 137.7 10.9 126 278-406 120-290 (305)
59 2g72_A Phenylethanolamine N-me 99.5 1.1E-13 3.7E-18 134.2 12.5 128 278-407 73-256 (289)
60 1vlm_A SAM-dependent methyltra 99.5 2.8E-13 9.4E-18 125.9 14.6 119 279-407 50-188 (219)
61 4e2x_A TCAB9; kijanose, tetron 99.5 5.1E-14 1.8E-18 143.6 9.9 137 265-406 96-252 (416)
62 3g07_A 7SK snRNA methylphospha 99.5 8.4E-14 2.9E-18 136.0 10.8 126 278-405 48-267 (292)
63 2i62_A Nicotinamide N-methyltr 99.5 3.1E-13 1.1E-17 127.9 14.0 131 276-408 56-240 (265)
64 3i53_A O-methyltransferase; CO 99.5 4.7E-13 1.6E-17 132.5 15.7 133 267-405 160-319 (332)
65 2avn_A Ubiquinone/menaquinone 99.5 2.7E-13 9.3E-18 129.4 13.2 98 278-379 56-153 (260)
66 2gs9_A Hypothetical protein TT 99.5 2.9E-13 9.8E-18 124.4 12.6 96 277-380 37-134 (211)
67 1ri5_A MRNA capping enzyme; me 99.5 2E-13 6.9E-18 131.4 12.0 99 278-378 66-174 (298)
68 3thr_A Glycine N-methyltransfe 99.5 1.1E-13 3.9E-18 133.6 9.9 99 278-378 59-175 (293)
69 3d2l_A SAM-dependent methyltra 99.5 1E-12 3.5E-17 122.8 15.8 107 265-377 24-136 (243)
70 2r3s_A Uncharacterized protein 99.4 7.5E-13 2.6E-17 130.4 14.7 125 276-405 165-321 (335)
71 3gwz_A MMCR; methyltransferase 99.4 1.5E-12 5.2E-17 131.2 17.2 136 265-406 191-355 (369)
72 3mti_A RRNA methylase; SAM-dep 99.4 4.4E-13 1.5E-17 120.8 11.6 130 278-409 24-171 (185)
73 3m70_A Tellurite resistance pr 99.4 1.2E-12 4E-17 126.4 14.9 123 278-406 122-259 (286)
74 3bkx_A SAM-dependent methyltra 99.4 1.1E-12 3.6E-17 125.5 14.1 126 277-407 44-219 (275)
75 1zx0_A Guanidinoacetate N-meth 99.4 1.6E-13 5.6E-18 129.0 8.3 122 278-401 62-204 (236)
76 3m33_A Uncharacterized protein 99.4 6.2E-13 2.1E-17 124.4 12.2 115 278-407 50-167 (226)
77 3g5t_A Trans-aconitate 3-methy 99.4 5.7E-13 2E-17 129.7 11.9 94 277-376 37-147 (299)
78 3dp7_A SAM-dependent methyltra 99.4 9.1E-13 3.1E-17 132.6 13.4 125 276-405 179-340 (363)
79 3reo_A (ISO)eugenol O-methyltr 99.4 1.7E-12 5.7E-17 131.1 15.3 135 265-406 191-354 (368)
80 3e05_A Precorrin-6Y C5,15-meth 99.4 4.4E-12 1.5E-16 116.3 16.8 114 276-400 40-161 (204)
81 1x19_A CRTF-related protein; m 99.4 3.1E-12 1E-16 128.1 16.9 135 265-405 179-346 (359)
82 1wzn_A SAM-dependent methyltra 99.4 1.3E-12 4.4E-17 123.3 13.4 110 265-377 30-144 (252)
83 1qzz_A RDMB, aclacinomycin-10- 99.4 2.1E-12 7.2E-17 129.4 15.5 135 266-406 172-338 (374)
84 3mcz_A O-methyltransferase; ad 99.4 2.3E-12 7.8E-17 128.3 15.6 137 266-406 168-338 (352)
85 2ip2_A Probable phenazine-spec 99.4 2.7E-12 9.2E-17 126.8 16.0 134 265-405 157-320 (334)
86 3grz_A L11 mtase, ribosomal pr 99.4 1.3E-12 4.6E-17 119.7 12.6 115 278-405 62-183 (205)
87 3ggd_A SAM-dependent methyltra 99.4 5.7E-13 1.9E-17 125.4 10.3 99 279-380 59-165 (245)
88 2zfu_A Nucleomethylin, cerebra 99.4 2.2E-12 7.6E-17 118.9 13.9 109 279-406 70-178 (215)
89 3p9c_A Caffeic acid O-methyltr 99.4 2.4E-12 8.1E-17 129.9 15.1 135 265-406 189-352 (364)
90 3q87_B N6 adenine specific DNA 99.4 2.1E-12 7.1E-17 116.1 13.2 116 279-406 26-148 (170)
91 3njr_A Precorrin-6Y methylase; 99.4 4.2E-12 1.4E-16 117.6 15.5 119 278-409 57-182 (204)
92 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.7E-12 9.3E-17 118.9 14.1 123 278-406 43-181 (214)
93 3hm2_A Precorrin-6Y C5,15-meth 99.4 3.5E-12 1.2E-16 113.5 13.7 119 277-408 26-154 (178)
94 2pxx_A Uncharacterized protein 99.4 8.8E-13 3E-17 120.5 9.7 115 278-399 44-175 (215)
95 3iv6_A Putative Zn-dependent a 99.4 1.8E-12 6E-17 125.7 12.0 111 265-379 34-149 (261)
96 2vdw_A Vaccinia virus capping 99.4 1E-12 3.4E-17 129.6 10.2 100 278-379 50-170 (302)
97 2fca_A TRNA (guanine-N(7)-)-me 99.4 3.4E-12 1.1E-16 119.0 12.9 123 278-406 40-178 (213)
98 3orh_A Guanidinoacetate N-meth 99.4 3.1E-13 1.1E-17 128.1 5.9 121 278-403 62-206 (236)
99 1fp1_D Isoliquiritigenin 2'-O- 99.4 2.1E-12 7.3E-17 130.1 12.4 134 266-406 198-359 (372)
100 2nxc_A L11 mtase, ribosomal pr 99.4 3.3E-12 1.1E-16 122.4 13.1 116 278-405 122-242 (254)
101 3lst_A CALO1 methyltransferase 99.4 6.1E-12 2.1E-16 125.6 15.2 134 266-406 174-335 (348)
102 4a6d_A Hydroxyindole O-methylt 99.4 1.2E-11 4E-16 124.3 17.2 135 265-405 168-332 (353)
103 1dus_A MJ0882; hypothetical pr 99.4 4.2E-12 1.5E-16 113.7 12.5 125 265-397 41-173 (194)
104 3evz_A Methyltransferase; NYSG 99.4 7E-12 2.4E-16 116.7 14.3 125 278-406 57-205 (230)
105 1tw3_A COMT, carminomycin 4-O- 99.4 5.2E-12 1.8E-16 126.1 14.3 133 268-406 175-338 (360)
106 1l3i_A Precorrin-6Y methyltran 99.3 6.5E-12 2.2E-16 112.2 12.4 113 278-402 35-155 (192)
107 2qe6_A Uncharacterized protein 99.3 5.6E-12 1.9E-16 122.5 12.8 103 276-381 77-199 (274)
108 3mq2_A 16S rRNA methyltransfer 99.3 4.8E-12 1.6E-16 117.1 11.5 126 278-408 29-185 (218)
109 1fbn_A MJ fibrillarin homologu 99.3 2.1E-11 7.2E-16 114.4 15.9 128 269-405 67-211 (230)
110 2yxd_A Probable cobalt-precorr 99.3 1.7E-11 5.8E-16 108.9 14.2 113 278-405 37-155 (183)
111 1fp2_A Isoflavone O-methyltran 99.3 8.9E-12 3E-16 124.5 12.9 123 277-406 189-340 (352)
112 1xdz_A Methyltransferase GIDB; 99.3 8E-12 2.7E-16 118.0 11.7 118 278-405 72-200 (240)
113 4df3_A Fibrillarin-like rRNA/T 99.3 3E-11 1E-15 115.2 14.9 124 275-405 76-215 (233)
114 1nt2_A Fibrillarin-like PRE-rR 99.3 3.4E-11 1.2E-15 112.3 15.0 121 278-407 59-195 (210)
115 3eey_A Putative rRNA methylase 99.3 1.2E-11 4.1E-16 112.4 11.5 130 278-409 24-175 (197)
116 1af7_A Chemotaxis receptor met 99.3 1.2E-11 4.1E-16 120.6 12.2 97 278-377 107-251 (274)
117 3bgv_A MRNA CAP guanine-N7 met 99.3 3.7E-12 1.3E-16 124.9 8.3 99 278-379 36-156 (313)
118 3lpm_A Putative methyltransfer 99.3 3.1E-11 1E-15 115.4 14.6 123 277-405 50-199 (259)
119 3dmg_A Probable ribosomal RNA 99.3 2.8E-11 9.6E-16 123.2 14.8 99 278-378 235-340 (381)
120 3p2e_A 16S rRNA methylase; met 99.3 1.8E-11 6.3E-16 115.4 12.2 127 278-408 26-186 (225)
121 3uwp_A Histone-lysine N-methyl 99.3 4.7E-12 1.6E-16 129.8 8.5 114 264-383 161-293 (438)
122 2b3t_A Protein methyltransfera 99.3 4.5E-11 1.5E-15 115.3 14.5 140 257-404 91-260 (276)
123 3id6_C Fibrillarin-like rRNA/T 99.3 7.3E-11 2.5E-15 112.4 15.7 124 276-406 76-215 (232)
124 3r0q_C Probable protein argini 99.3 2.1E-11 7.3E-16 123.5 12.6 111 265-379 52-170 (376)
125 3dxy_A TRNA (guanine-N(7)-)-me 99.3 9.6E-12 3.3E-16 116.8 9.3 119 278-402 36-172 (218)
126 2ipx_A RRNA 2'-O-methyltransfe 99.3 5.2E-11 1.8E-15 111.6 14.3 121 277-405 78-215 (233)
127 2fyt_A Protein arginine N-meth 99.3 2.5E-11 8.6E-16 121.4 12.6 96 278-376 66-169 (340)
128 3q7e_A Protein arginine N-meth 99.3 1.6E-11 5.4E-16 123.2 11.1 97 278-377 68-172 (349)
129 3p9n_A Possible methyltransfer 99.3 1.3E-11 4.6E-16 111.9 9.6 99 278-380 46-155 (189)
130 2pwy_A TRNA (adenine-N(1)-)-me 99.3 3.6E-11 1.2E-15 113.5 12.7 116 276-404 96-221 (258)
131 1ej0_A FTSJ; methyltransferase 99.3 1.4E-11 4.9E-16 108.0 9.1 116 278-405 24-159 (180)
132 3hp7_A Hemolysin, putative; st 99.3 3.2E-11 1.1E-15 118.6 12.5 123 278-408 87-233 (291)
133 1zg3_A Isoflavanone 4'-O-methy 99.3 2.7E-11 9.3E-16 121.2 12.3 122 278-406 195-346 (358)
134 3htx_A HEN1; HEN1, small RNA m 99.2 2.7E-11 9.3E-16 132.7 12.3 97 278-378 723-834 (950)
135 3lbf_A Protein-L-isoaspartate 99.2 3.7E-11 1.3E-15 110.3 11.5 92 276-378 77-174 (210)
136 3ckk_A TRNA (guanine-N(7)-)-me 99.2 3.4E-11 1.2E-15 114.3 11.6 119 278-402 48-190 (235)
137 1yb2_A Hypothetical protein TA 99.2 3.4E-11 1.2E-15 116.2 11.4 116 276-405 110-235 (275)
138 3g89_A Ribosomal RNA small sub 99.2 4.1E-11 1.4E-15 114.7 11.8 120 276-405 80-210 (249)
139 2frn_A Hypothetical protein PH 99.2 4.9E-11 1.7E-15 115.8 12.2 116 278-403 127-253 (278)
140 4dcm_A Ribosomal RNA large sub 99.2 5.7E-11 2E-15 120.6 13.1 115 261-378 207-334 (375)
141 2ld4_A Anamorsin; methyltransf 99.2 2E-11 6.7E-16 109.3 8.5 103 278-399 14-128 (176)
142 4dzr_A Protein-(glutamine-N5) 99.2 4.2E-12 1.4E-16 115.8 3.4 138 261-405 14-190 (215)
143 1p91_A Ribosomal RNA large sub 99.2 2.3E-11 7.9E-16 116.0 8.5 91 278-380 87-180 (269)
144 3fpf_A Mtnas, putative unchara 99.2 5.6E-11 1.9E-15 117.1 11.3 91 278-378 124-222 (298)
145 2pjd_A Ribosomal RNA small sub 99.2 4E-11 1.4E-15 119.7 10.0 97 278-378 198-303 (343)
146 3mb5_A SAM-dependent methyltra 99.2 9.1E-11 3.1E-15 111.0 11.6 115 276-404 93-219 (255)
147 2ift_A Putative methylase HI07 99.2 4.9E-11 1.7E-15 109.9 9.0 97 278-380 55-165 (201)
148 1g6q_1 HnRNP arginine N-methyl 99.2 9.5E-11 3.3E-15 116.5 11.0 96 278-376 40-143 (328)
149 1vbf_A 231AA long hypothetical 99.2 9.2E-11 3.1E-15 109.2 10.3 91 277-378 71-165 (231)
150 2esr_A Methyltransferase; stru 99.2 5.9E-11 2E-15 106.0 8.5 97 278-380 33-140 (177)
151 1jsx_A Glucose-inhibited divis 99.2 9.9E-11 3.4E-15 107.0 10.0 112 278-405 67-186 (207)
152 3gdh_A Trimethylguanosine synt 99.2 4E-12 1.4E-16 119.4 0.7 120 278-403 80-215 (241)
153 1o9g_A RRNA methyltransferase; 99.1 1.6E-10 5.4E-15 109.6 11.3 114 263-378 38-214 (250)
154 3bwc_A Spermidine synthase; SA 99.1 1.2E-10 4.1E-15 114.7 10.6 126 277-405 96-238 (304)
155 1i9g_A Hypothetical protein RV 99.1 2.1E-10 7.2E-15 110.0 12.1 124 267-403 90-226 (280)
156 2plw_A Ribosomal RNA methyltra 99.1 3E-10 1E-14 103.3 12.5 116 278-405 24-177 (201)
157 2ozv_A Hypothetical protein AT 99.1 3.3E-10 1.1E-14 108.8 13.3 123 276-405 36-192 (260)
158 3dr5_A Putative O-methyltransf 99.1 1.2E-10 4.1E-15 109.5 9.7 110 265-382 45-167 (221)
159 2y1w_A Histone-arginine methyl 99.1 1.6E-10 5.5E-15 115.7 11.2 95 278-377 52-154 (348)
160 1ixk_A Methyltransferase; open 99.1 3.8E-10 1.3E-14 111.6 13.8 142 258-405 103-273 (315)
161 1o54_A SAM-dependent O-methylt 99.1 3.6E-10 1.2E-14 108.9 12.7 115 277-405 113-237 (277)
162 3bzb_A Uncharacterized protein 99.1 4E-10 1.4E-14 109.4 13.0 122 278-405 81-235 (281)
163 3ntv_A MW1564 protein; rossman 99.1 1.6E-10 5.4E-15 108.8 9.2 98 278-383 73-181 (232)
164 3tfw_A Putative O-methyltransf 99.1 2.4E-10 8.3E-15 108.8 10.6 97 278-382 65-174 (248)
165 2fhp_A Methylase, putative; al 99.1 1.8E-10 6.2E-15 103.0 9.0 97 278-380 46-156 (187)
166 3giw_A Protein of unknown func 99.1 2E-10 6.7E-15 112.1 9.7 104 275-381 77-203 (277)
167 2h00_A Methyltransferase 10 do 99.1 9.9E-11 3.4E-15 111.0 7.2 140 264-405 51-236 (254)
168 2fpo_A Methylase YHHF; structu 99.1 2.2E-10 7.6E-15 105.6 9.3 97 278-380 56-162 (202)
169 3tr6_A O-methyltransferase; ce 99.1 2.2E-10 7.7E-15 106.1 9.4 107 265-382 56-178 (225)
170 3u81_A Catechol O-methyltransf 99.1 5.8E-10 2E-14 103.7 12.1 127 265-403 50-193 (221)
171 3tma_A Methyltransferase; thum 99.1 7.6E-10 2.6E-14 110.7 13.8 119 278-405 205-337 (354)
172 3opn_A Putative hemolysin; str 99.1 3.1E-10 1.1E-14 107.7 10.4 123 278-408 39-185 (232)
173 1ws6_A Methyltransferase; stru 99.1 9.3E-11 3.2E-15 103.3 6.1 96 278-380 43-149 (171)
174 3dou_A Ribosomal RNA large sub 99.1 4.4E-10 1.5E-14 103.2 10.6 119 278-407 27-164 (191)
175 1g8a_A Fibrillarin-like PRE-rR 99.1 2.3E-09 7.7E-14 99.7 15.5 120 276-405 73-210 (227)
176 2gpy_A O-methyltransferase; st 99.1 2.3E-10 8E-15 107.0 8.8 106 265-381 46-163 (233)
177 2yxe_A Protein-L-isoaspartate 99.1 4.3E-10 1.5E-14 103.5 10.4 90 278-378 79-177 (215)
178 3duw_A OMT, O-methyltransferas 99.1 6E-10 2E-14 103.2 11.1 107 265-382 50-171 (223)
179 1dl5_A Protein-L-isoaspartate 99.1 3.4E-10 1.2E-14 111.7 9.7 90 277-377 76-174 (317)
180 2vdv_E TRNA (guanine-N(7)-)-me 99.1 8.1E-10 2.8E-14 104.6 11.7 116 278-399 51-191 (246)
181 3fzg_A 16S rRNA methylase; met 99.1 1.2E-10 4.1E-15 107.8 5.7 94 278-377 51-151 (200)
182 2yvl_A TRMI protein, hypotheti 99.1 1.4E-09 4.7E-14 102.0 13.0 112 278-403 93-211 (248)
183 2igt_A SAM dependent methyltra 99.0 5.1E-10 1.8E-14 111.8 10.2 124 278-403 155-300 (332)
184 3c3p_A Methyltransferase; NP_9 99.0 4.1E-10 1.4E-14 103.7 8.8 95 278-381 58-163 (210)
185 3b3j_A Histone-arginine methyl 99.0 4.8E-10 1.7E-14 117.4 10.2 108 265-377 147-262 (480)
186 1u2z_A Histone-lysine N-methyl 99.0 7.5E-10 2.6E-14 114.4 11.2 112 265-382 231-363 (433)
187 2wa2_A Non-structural protein 99.0 3.2E-10 1.1E-14 110.5 7.9 96 277-380 83-195 (276)
188 2bm8_A Cephalosporin hydroxyla 99.0 2.9E-10 9.8E-15 107.8 7.4 127 265-402 73-214 (236)
189 4azs_A Methyltransferase WBDD; 99.0 2.1E-10 7.1E-15 122.4 6.5 126 279-407 69-208 (569)
190 1ne2_A Hypothetical protein TA 99.0 3.9E-09 1.3E-13 96.2 13.9 112 278-403 53-166 (200)
191 2nyu_A Putative ribosomal RNA 99.0 8.2E-10 2.8E-14 99.8 9.0 117 278-405 24-168 (196)
192 1i1n_A Protein-L-isoaspartate 99.0 1.2E-09 4.1E-14 101.4 10.1 90 278-378 79-182 (226)
193 3lec_A NADB-rossmann superfami 99.0 6.6E-09 2.2E-13 98.8 15.3 129 264-406 11-148 (230)
194 3sso_A Methyltransferase; macr 99.0 3.2E-10 1.1E-14 115.9 6.5 106 265-380 206-326 (419)
195 2yxl_A PH0851 protein, 450AA l 99.0 4.9E-09 1.7E-13 108.7 15.2 140 258-403 244-415 (450)
196 2oxt_A Nucleoside-2'-O-methylt 99.0 5.7E-10 1.9E-14 108.1 7.5 95 278-380 76-187 (265)
197 3ajd_A Putative methyltransfer 99.0 2.7E-09 9.3E-14 103.1 12.2 138 262-404 72-238 (274)
198 3a27_A TYW2, uncharacterized p 99.0 2.6E-09 8.8E-14 103.4 12.0 94 278-381 121-222 (272)
199 1wy7_A Hypothetical protein PH 99.0 1.3E-08 4.3E-13 93.0 15.6 117 278-405 51-173 (207)
200 3gnl_A Uncharacterized protein 99.0 8.8E-09 3E-13 98.8 15.1 129 263-405 10-147 (244)
201 4hc4_A Protein arginine N-meth 99.0 2.1E-09 7.1E-14 109.3 11.3 94 278-375 85-186 (376)
202 1jg1_A PIMT;, protein-L-isoasp 99.0 1.1E-09 3.6E-14 102.9 8.5 88 279-378 94-189 (235)
203 3gjy_A Spermidine synthase; AP 99.0 2.6E-09 9E-14 106.1 11.7 99 279-379 92-201 (317)
204 3r3h_A O-methyltransferase, SA 99.0 2.7E-10 9.4E-15 108.4 4.5 98 278-383 62-175 (242)
205 2qm3_A Predicted methyltransfe 99.0 4.4E-09 1.5E-13 106.2 13.6 120 278-405 174-307 (373)
206 2hnk_A SAM-dependent O-methylt 99.0 1.3E-09 4.3E-14 102.7 8.8 106 265-381 52-184 (239)
207 1sui_A Caffeoyl-COA O-methyltr 99.0 1.2E-09 4.2E-14 104.2 8.7 106 265-381 71-193 (247)
208 3kr9_A SAM-dependent methyltra 98.9 1.4E-08 4.8E-13 96.2 15.4 126 265-405 6-141 (225)
209 2b25_A Hypothetical protein; s 98.9 3.3E-09 1.1E-13 105.1 11.6 91 278-378 107-219 (336)
210 3tm4_A TRNA (guanine N2-)-meth 98.9 9.1E-09 3.1E-13 104.0 14.6 118 278-405 219-350 (373)
211 2pbf_A Protein-L-isoaspartate 98.9 1.8E-09 6.3E-14 100.2 8.7 90 278-378 82-193 (227)
212 3adn_A Spermidine synthase; am 98.9 3.1E-09 1E-13 104.4 10.4 99 277-378 84-198 (294)
213 3cbg_A O-methyltransferase; cy 98.9 2.2E-09 7.6E-14 101.0 9.0 97 278-382 74-186 (232)
214 1zq9_A Probable dimethyladenos 98.9 1.7E-09 5.7E-14 105.5 8.4 105 265-375 17-144 (285)
215 2avd_A Catechol-O-methyltransf 98.9 1.9E-09 6.6E-14 100.0 7.8 106 265-381 61-182 (229)
216 1r18_A Protein-L-isoaspartate( 98.9 4.3E-09 1.5E-13 98.1 10.0 89 278-378 86-194 (227)
217 2p41_A Type II methyltransfera 98.9 2.1E-09 7.1E-14 106.2 7.6 100 278-380 84-193 (305)
218 1nv8_A HEMK protein; class I a 98.9 4.4E-09 1.5E-13 102.5 9.5 133 257-397 104-264 (284)
219 1xj5_A Spermidine synthase 1; 98.9 7.7E-09 2.6E-13 103.4 11.1 98 277-377 121-234 (334)
220 1uir_A Polyamine aminopropyltr 98.9 9.6E-09 3.3E-13 101.5 11.7 119 278-400 79-218 (314)
221 1iy9_A Spermidine synthase; ro 98.9 6.7E-09 2.3E-13 100.8 10.4 123 277-403 76-214 (275)
222 3m6w_A RRNA methylase; rRNA me 98.9 9.2E-09 3.2E-13 107.2 11.9 142 258-404 86-256 (464)
223 1inl_A Spermidine synthase; be 98.9 7.4E-09 2.5E-13 101.5 10.5 121 278-402 92-229 (296)
224 2pt6_A Spermidine synthase; tr 98.9 8.9E-09 3E-13 102.3 11.1 121 278-402 118-254 (321)
225 1sqg_A SUN protein, FMU protei 98.9 2E-08 6.9E-13 103.3 14.1 136 262-403 235-400 (429)
226 3k6r_A Putative transferase PH 98.9 1.5E-08 5.1E-13 98.9 12.4 116 278-403 127-253 (278)
227 2i7c_A Spermidine synthase; tr 98.9 8.7E-09 3E-13 100.3 10.6 99 277-378 79-192 (283)
228 3c3y_A Pfomt, O-methyltransfer 98.9 5.6E-09 1.9E-13 98.7 9.0 106 265-381 62-184 (237)
229 2o07_A Spermidine synthase; st 98.8 6E-09 2E-13 102.7 9.3 99 277-378 96-209 (304)
230 3m4x_A NOL1/NOP2/SUN family pr 98.8 1.4E-08 4.8E-13 105.7 12.2 142 258-404 90-260 (456)
231 2b2c_A Spermidine synthase; be 98.8 4.8E-09 1.6E-13 104.0 8.0 98 278-378 110-222 (314)
232 2frx_A Hypothetical protein YE 98.8 3.2E-08 1.1E-12 103.6 14.1 135 258-398 100-266 (479)
233 1uwv_A 23S rRNA (uracil-5-)-me 98.8 2.7E-08 9.4E-13 102.5 12.9 129 264-405 274-412 (433)
234 2yx1_A Hypothetical protein MJ 98.8 2E-08 6.7E-13 100.2 11.3 113 278-407 197-317 (336)
235 4dmg_A Putative uncharacterize 98.8 1.6E-08 5.5E-13 103.3 10.8 123 278-402 216-352 (393)
236 2b78_A Hypothetical protein SM 98.8 1.3E-08 4.5E-13 103.4 9.8 125 278-404 214-359 (385)
237 1mjf_A Spermidine synthase; sp 98.8 1.2E-08 4.1E-13 99.2 9.1 97 278-378 77-193 (281)
238 2xyq_A Putative 2'-O-methyl tr 98.8 2.8E-08 9.4E-13 97.6 11.3 113 278-405 65-195 (290)
239 3c0k_A UPF0064 protein YCCW; P 98.8 3.3E-08 1.1E-12 100.5 11.7 123 278-402 222-365 (396)
240 1wxx_A TT1595, hypothetical pr 98.7 3.2E-08 1.1E-12 100.2 10.8 121 278-400 211-349 (382)
241 2cmg_A Spermidine synthase; tr 98.7 2.3E-08 8E-13 96.5 7.9 88 277-377 73-170 (262)
242 2h1r_A Dimethyladenosine trans 98.7 3.6E-08 1.2E-12 96.8 9.3 90 277-372 43-153 (299)
243 2as0_A Hypothetical protein PH 98.7 4.3E-08 1.5E-12 99.5 9.8 122 278-401 219-360 (396)
244 3v97_A Ribosomal RNA large sub 98.7 5.8E-08 2E-12 106.1 10.4 120 278-403 541-678 (703)
245 1qam_A ERMC' methyltransferase 98.6 1.7E-07 5.9E-12 89.1 11.8 78 265-345 19-101 (244)
246 3lcv_B Sisomicin-gentamicin re 98.6 1.5E-07 5E-12 91.1 11.1 137 265-408 123-273 (281)
247 2ih2_A Modification methylase 98.6 2.6E-07 8.7E-12 93.7 13.2 116 278-399 41-186 (421)
248 2jjq_A Uncharacterized RNA met 98.6 1.3E-07 4.4E-12 97.5 11.0 111 278-405 292-407 (425)
249 2f8l_A Hypothetical protein LM 98.6 2.6E-07 8.9E-12 91.9 12.9 121 277-401 131-280 (344)
250 1yub_A Ermam, rRNA methyltrans 98.6 7.5E-09 2.6E-13 98.2 0.9 96 276-376 29-143 (245)
251 3frh_A 16S rRNA methylase; met 98.6 2.5E-07 8.7E-12 88.5 10.5 96 276-377 105-205 (253)
252 3gru_A Dimethyladenosine trans 98.5 2.1E-07 7.1E-12 91.6 9.6 82 265-348 39-124 (295)
253 3bt7_A TRNA (uracil-5-)-methyl 98.5 3.6E-07 1.2E-11 92.1 9.2 125 265-405 203-349 (369)
254 3ldu_A Putative methylase; str 98.4 9.4E-07 3.2E-11 89.8 9.6 109 266-377 185-343 (385)
255 3fut_A Dimethyladenosine trans 98.3 1.2E-06 4E-11 85.2 9.4 68 279-348 49-120 (271)
256 3k0b_A Predicted N6-adenine-sp 98.3 9.8E-07 3.3E-11 90.0 9.3 97 278-377 203-349 (393)
257 3ldg_A Putative uncharacterize 98.3 2.1E-06 7E-11 87.4 11.6 97 278-377 196-342 (384)
258 3tqs_A Ribosomal RNA small sub 98.3 8.7E-07 3E-11 85.2 8.1 69 277-348 30-106 (255)
259 2okc_A Type I restriction enzy 98.3 1.5E-06 5.2E-11 89.6 9.6 98 278-378 173-307 (445)
260 2b9e_A NOL1/NOP2/SUN domain fa 98.3 8.5E-06 2.9E-10 80.4 14.3 139 258-402 87-260 (309)
261 3evf_A RNA-directed RNA polyme 98.2 1.9E-06 6.4E-11 83.6 8.3 126 278-407 76-211 (277)
262 2qfm_A Spermine synthase; sper 98.2 3.6E-06 1.2E-10 84.9 8.9 101 276-378 188-314 (364)
263 3ftd_A Dimethyladenosine trans 98.1 1.6E-05 5.4E-10 76.0 11.4 80 265-346 20-103 (249)
264 2dul_A N(2),N(2)-dimethylguano 98.1 4.9E-06 1.7E-10 84.4 7.6 91 278-377 49-163 (378)
265 3uzu_A Ribosomal RNA small sub 98.0 4.5E-06 1.5E-10 81.3 6.2 70 277-348 43-124 (279)
266 2efj_A 3,7-dimethylxanthine me 98.0 3.2E-05 1.1E-09 78.6 12.5 102 278-380 54-227 (384)
267 2r6z_A UPF0341 protein in RSP 98.0 7.4E-06 2.5E-10 78.7 6.9 69 278-348 85-171 (258)
268 3b5i_A S-adenosyl-L-methionine 98.0 8.6E-06 2.9E-10 82.6 7.6 51 328-379 140-226 (374)
269 4gqb_A Protein arginine N-meth 98.0 1.1E-05 3.9E-10 86.8 8.9 97 275-375 356-464 (637)
270 3axs_A Probable N(2),N(2)-dime 98.0 1.1E-05 3.8E-10 82.3 8.0 92 278-378 54-158 (392)
271 3v97_A Ribosomal RNA large sub 98.0 2.4E-05 8.2E-10 85.4 11.1 98 278-377 192-346 (703)
272 1qyr_A KSGA, high level kasuga 98.0 9.5E-06 3.2E-10 77.8 6.6 66 278-347 23-99 (252)
273 3ua3_A Protein arginine N-meth 97.9 1E-05 3.6E-10 87.5 7.0 96 277-375 410-531 (745)
274 1m6y_A S-adenosyl-methyltransf 97.9 9.9E-06 3.4E-10 79.7 6.1 67 278-346 28-106 (301)
275 1m6e_X S-adenosyl-L-methionnin 97.9 6.7E-05 2.3E-09 75.6 11.1 98 279-379 54-210 (359)
276 2qy6_A UPF0209 protein YFCK; s 97.8 4.4E-05 1.5E-09 73.4 8.7 120 277-404 61-232 (257)
277 4auk_A Ribosomal RNA large sub 97.8 0.00013 4.4E-09 73.7 12.1 114 278-401 213-334 (375)
278 2ar0_A M.ecoki, type I restric 97.8 3.7E-05 1.3E-09 81.5 8.1 99 278-378 171-312 (541)
279 3ll7_A Putative methyltransfer 97.7 2E-05 6.9E-10 80.7 5.3 66 278-345 95-170 (410)
280 3cvo_A Methyltransferase-like 97.7 0.00029 1E-08 65.4 12.5 92 278-381 32-157 (202)
281 3gcz_A Polyprotein; flavivirus 97.7 7.3E-05 2.5E-09 72.6 8.0 140 278-424 92-242 (282)
282 2oyr_A UPF0341 protein YHIQ; a 97.6 3.3E-05 1.1E-09 74.4 4.5 89 278-372 90-194 (258)
283 3khk_A Type I restriction-modi 97.6 0.00026 8.7E-09 75.1 11.6 119 279-399 247-419 (544)
284 3o4f_A Spermidine synthase; am 97.6 0.00023 7.8E-09 69.8 10.3 99 276-377 83-197 (294)
285 3lkd_A Type I restriction-modi 97.6 0.00073 2.5E-08 71.6 14.6 144 254-399 199-381 (542)
286 3s1s_A Restriction endonucleas 97.5 0.00052 1.8E-08 75.5 11.9 98 278-377 323-464 (878)
287 2k4m_A TR8_protein, UPF0146 pr 97.3 0.00044 1.5E-08 61.1 7.2 82 279-380 38-123 (153)
288 2wk1_A NOVP; transferase, O-me 97.3 0.0019 6.4E-08 62.9 12.0 118 278-401 108-266 (282)
289 3eld_A Methyltransferase; flav 97.2 0.0014 4.6E-08 64.2 10.1 126 277-405 82-216 (300)
290 3lkz_A Non-structural protein 97.1 0.00097 3.3E-08 65.2 7.9 120 279-402 97-228 (321)
291 4fzv_A Putative methyltransfer 97.1 0.003 1E-07 63.5 11.5 116 258-378 133-284 (359)
292 2px2_A Genome polyprotein [con 97.0 0.0011 3.8E-08 63.6 6.8 101 278-380 75-185 (269)
293 3p8z_A Mtase, non-structural p 97.0 0.0022 7.4E-08 61.0 8.5 119 279-400 81-208 (267)
294 3c6k_A Spermine synthase; sper 96.7 0.0038 1.3E-07 63.2 8.4 118 277-397 206-350 (381)
295 1wg8_A Predicted S-adenosylmet 96.7 0.0046 1.6E-07 60.2 8.5 65 278-344 24-95 (285)
296 2zig_A TTHA0409, putative modi 96.1 0.0066 2.3E-07 58.9 5.8 40 278-319 237-276 (297)
297 3ufb_A Type I restriction-modi 95.8 0.051 1.8E-06 57.2 11.8 118 254-377 199-361 (530)
298 3r24_A NSP16, 2'-O-methyl tran 95.8 0.026 8.8E-07 55.3 8.6 114 278-405 111-239 (344)
299 3vyw_A MNMC2; tRNA wobble urid 95.7 0.095 3.3E-06 51.5 12.4 76 322-405 168-246 (308)
300 1g55_A DNA cytosine methyltran 94.6 0.25 8.4E-06 48.9 11.7 121 279-404 4-146 (343)
301 1rjd_A PPM1P, carboxy methyl t 94.5 0.39 1.3E-05 47.5 13.0 101 276-381 97-235 (334)
302 2vz8_A Fatty acid synthase; tr 94.2 0.014 5E-07 71.8 2.2 95 279-378 1243-1348(2512)
303 2zig_A TTHA0409, putative modi 94.1 0.071 2.4E-06 51.5 6.5 83 321-403 21-132 (297)
304 1f8f_A Benzyl alcohol dehydrog 93.4 0.39 1.3E-05 47.4 10.5 92 278-380 192-291 (371)
305 3g7u_A Cytosine-specific methy 93.3 0.4 1.4E-05 48.2 10.6 119 279-401 4-145 (376)
306 1g60_A Adenine-specific methyl 93.1 0.12 4.1E-06 48.9 6.0 40 278-319 214-253 (260)
307 2oo3_A Protein involved in cat 92.8 0.52 1.8E-05 45.6 10.1 123 281-409 96-228 (283)
308 3qv2_A 5-cytosine DNA methyltr 92.5 1 3.5E-05 44.3 12.0 124 279-406 12-159 (327)
309 1pqw_A Polyketide synthase; ro 92.4 0.38 1.3E-05 42.8 8.1 91 278-380 40-139 (198)
310 3fpc_A NADP-dependent alcohol 92.2 0.51 1.7E-05 46.2 9.4 91 279-380 169-268 (352)
311 3tka_A Ribosomal RNA small sub 92.0 0.22 7.5E-06 49.6 6.4 77 265-344 46-134 (347)
312 3two_A Mannitol dehydrogenase; 92.0 0.5 1.7E-05 46.2 9.1 88 278-380 178-267 (348)
313 2c7p_A Modification methylase 91.6 1.6 5.4E-05 42.9 12.1 121 279-403 13-149 (327)
314 1pl8_A Human sorbitol dehydrog 91.5 0.58 2E-05 45.9 8.9 91 278-379 173-274 (356)
315 3pvc_A TRNA 5-methylaminomethy 91.5 1.1 3.8E-05 48.1 11.9 77 322-405 150-231 (689)
316 1boo_A Protein (N-4 cytosine-s 91.4 0.29 1E-05 47.9 6.6 82 322-403 15-116 (323)
317 3ubt_Y Modification methylase 91.3 2.8 9.5E-05 40.4 13.4 124 279-405 2-141 (331)
318 4ej6_A Putative zinc-binding d 91.3 0.91 3.1E-05 44.9 10.1 91 279-380 185-286 (370)
319 2dph_A Formaldehyde dismutase; 91.0 0.38 1.3E-05 48.0 7.1 100 278-380 187-301 (398)
320 3s2e_A Zinc-containing alcohol 90.9 0.81 2.8E-05 44.4 9.2 91 278-379 168-264 (340)
321 3fwz_A Inner membrane protein 90.8 2.2 7.5E-05 35.8 10.8 108 279-402 9-122 (140)
322 1e3j_A NADP(H)-dependent ketos 90.2 1.3 4.5E-05 43.2 10.0 91 278-379 170-272 (352)
323 3tos_A CALS11; methyltransfera 90.0 1.1 3.7E-05 42.8 8.9 124 279-407 72-247 (257)
324 1i4w_A Mitochondrial replicati 90.0 0.51 1.7E-05 47.1 6.9 53 278-332 60-117 (353)
325 4h0n_A DNMT2; SAH binding, tra 89.9 2.3 7.9E-05 41.8 11.5 125 279-407 5-149 (333)
326 3gms_A Putative NADPH:quinone 89.8 1.3 4.6E-05 42.9 9.7 91 278-380 146-245 (340)
327 3ps9_A TRNA 5-methylaminomethy 89.3 1.9 6.3E-05 46.2 11.2 63 336-405 177-239 (676)
328 2uyo_A Hypothetical protein ML 89.2 2 7E-05 41.8 10.4 100 276-380 102-220 (310)
329 1p0f_A NADP-dependent alcohol 88.5 3.2 0.00011 40.7 11.6 91 278-379 193-294 (373)
330 3uko_A Alcohol dehydrogenase c 88.5 2.3 8E-05 41.9 10.5 91 279-380 196-297 (378)
331 1v3u_A Leukotriene B4 12- hydr 88.5 2 6.9E-05 41.4 9.9 91 277-379 146-245 (333)
332 3uog_A Alcohol dehydrogenase; 88.5 1.2 4E-05 43.8 8.3 91 278-380 191-289 (363)
333 1cdo_A Alcohol dehydrogenase; 88.3 2.9 9.8E-05 41.1 11.0 91 278-379 194-295 (374)
334 2jhf_A Alcohol dehydrogenase E 88.1 3.6 0.00012 40.4 11.6 91 278-379 193-294 (374)
335 1kol_A Formaldehyde dehydrogen 88.1 1.4 4.8E-05 43.7 8.7 98 278-380 187-302 (398)
336 2fzw_A Alcohol dehydrogenase c 88.1 3.4 0.00012 40.4 11.4 91 278-379 192-293 (373)
337 4b7c_A Probable oxidoreductase 87.8 1.2 4.1E-05 43.1 7.7 91 278-380 151-250 (336)
338 3ip1_A Alcohol dehydrogenase, 87.7 2.6 8.7E-05 42.1 10.3 97 278-380 215-320 (404)
339 3jyn_A Quinone oxidoreductase; 87.6 2 6.8E-05 41.4 9.1 91 278-380 142-241 (325)
340 2d8a_A PH0655, probable L-thre 87.5 1.6 5.4E-05 42.5 8.5 91 278-379 169-268 (348)
341 2c0c_A Zinc binding alcohol de 87.5 1.8 6.1E-05 42.5 8.9 91 278-380 165-263 (362)
342 1uuf_A YAHK, zinc-type alcohol 87.4 1 3.5E-05 44.5 7.1 88 278-379 196-289 (369)
343 3qwb_A Probable quinone oxidor 87.1 2.7 9.1E-05 40.5 9.8 90 277-378 149-247 (334)
344 1e3i_A Alcohol dehydrogenase, 87.0 3.8 0.00013 40.2 10.9 91 278-379 197-298 (376)
345 3goh_A Alcohol dehydrogenase, 86.8 1.4 4.6E-05 42.3 7.4 83 278-377 144-228 (315)
346 2eih_A Alcohol dehydrogenase; 86.1 2 6.7E-05 41.7 8.3 90 278-379 168-266 (343)
347 4eye_A Probable oxidoreductase 85.6 1.7 5.8E-05 42.3 7.6 88 278-378 161-257 (342)
348 3ggo_A Prephenate dehydrogenas 85.3 7.8 0.00027 37.4 12.1 88 278-375 34-125 (314)
349 1vj0_A Alcohol dehydrogenase, 85.2 2.2 7.4E-05 42.2 8.2 92 278-380 197-300 (380)
350 3jv7_A ADH-A; dehydrogenase, n 85.2 2.3 7.7E-05 41.3 8.2 91 278-380 173-272 (345)
351 2hcy_A Alcohol dehydrogenase 1 85.1 1.5 5.2E-05 42.6 6.9 91 278-379 171-270 (347)
352 1g60_A Adenine-specific methyl 84.6 2.3 7.7E-05 39.9 7.6 77 323-403 6-95 (260)
353 1rjw_A ADH-HT, alcohol dehydro 84.4 2.9 0.0001 40.5 8.6 89 278-378 166-261 (339)
354 1yb5_A Quinone oxidoreductase; 84.1 2.6 8.8E-05 41.2 8.1 89 278-378 172-269 (351)
355 3nx4_A Putative oxidoreductase 84.0 3.1 0.00011 39.7 8.5 89 280-380 150-243 (324)
356 4dvj_A Putative zinc-dependent 84.0 4.3 0.00015 39.8 9.7 89 277-377 172-269 (363)
357 2h6e_A ADH-4, D-arabinose 1-de 83.6 2.2 7.4E-05 41.5 7.2 90 278-379 172-270 (344)
358 1qor_A Quinone oxidoreductase; 83.4 2.6 8.9E-05 40.5 7.7 91 277-379 141-240 (327)
359 2b5w_A Glucose dehydrogenase; 83.2 3.4 0.00012 40.3 8.5 90 278-380 174-275 (357)
360 4a2c_A Galactitol-1-phosphate 82.9 18 0.00063 34.5 13.6 93 278-381 162-263 (346)
361 1piw_A Hypothetical zinc-type 82.4 2.1 7.2E-05 41.9 6.7 91 278-378 181-276 (360)
362 2j3h_A NADP-dependent oxidored 82.4 5.4 0.00018 38.4 9.6 91 278-380 157-257 (345)
363 1jvb_A NAD(H)-dependent alcoho 82.4 2.5 8.7E-05 41.0 7.2 92 278-380 172-273 (347)
364 2j8z_A Quinone oxidoreductase; 82.0 3.7 0.00013 40.1 8.2 91 278-380 164-263 (354)
365 3m6i_A L-arabinitol 4-dehydrog 81.8 6.6 0.00023 38.2 10.0 90 280-380 183-285 (363)
366 3me5_A Cytosine-specific methy 81.5 7 0.00024 40.5 10.5 122 279-402 90-255 (482)
367 3llv_A Exopolyphosphatase-rela 80.2 18 0.00061 29.7 10.9 107 279-402 8-120 (141)
368 4dup_A Quinone oxidoreductase; 80.0 3.7 0.00013 40.0 7.4 91 278-380 169-267 (353)
369 3fbg_A Putative arginate lyase 79.8 4.8 0.00017 39.0 8.2 88 278-377 152-247 (346)
370 3gqv_A Enoyl reductase; medium 79.7 6.4 0.00022 38.6 9.1 89 278-378 166-263 (371)
371 1xa0_A Putative NADPH dependen 79.6 3.7 0.00013 39.4 7.2 90 279-380 152-248 (328)
372 3krt_A Crotonyl COA reductase; 79.4 5.1 0.00018 40.6 8.5 89 278-378 230-344 (456)
373 1wly_A CAAR, 2-haloacrylate re 79.1 5.2 0.00018 38.4 8.1 90 278-379 147-245 (333)
374 1tt7_A YHFP; alcohol dehydroge 78.5 5.2 0.00018 38.3 7.9 90 279-380 153-249 (330)
375 1iz0_A Quinone oxidoreductase; 78.4 2.1 7.3E-05 40.6 5.0 89 278-379 127-219 (302)
376 2cdc_A Glucose dehydrogenase g 78.1 4.9 0.00017 39.3 7.7 87 278-380 182-280 (366)
377 2zb4_A Prostaglandin reductase 77.8 5.7 0.00019 38.6 8.0 90 278-379 162-261 (357)
378 3tqh_A Quinone oxidoreductase; 77.7 5.6 0.00019 38.1 7.8 88 278-378 154-245 (321)
379 2f1k_A Prephenate dehydrogenas 77.7 16 0.00056 33.8 10.9 84 280-375 3-88 (279)
380 3l9w_A Glutathione-regulated p 77.6 11 0.00038 38.0 10.3 86 280-376 7-100 (413)
381 1lss_A TRK system potassium up 76.2 24 0.0008 28.4 10.4 106 279-400 6-117 (140)
382 1boo_A Protein (N-4 cytosine-s 76.1 2.9 0.0001 40.6 5.3 40 278-319 254-293 (323)
383 1eg2_A Modification methylase 75.9 2.9 9.9E-05 40.8 5.2 82 322-403 39-136 (319)
384 4hp8_A 2-deoxy-D-gluconate 3-d 74.7 12 0.0004 35.2 9.0 71 278-348 10-89 (247)
385 3l4b_C TRKA K+ channel protien 74.4 13 0.00044 33.3 9.0 86 281-376 4-97 (218)
386 4a0s_A Octenoyl-COA reductase/ 73.3 10 0.00034 38.1 8.7 89 278-378 222-336 (447)
387 2dq4_A L-threonine 3-dehydroge 73.3 4.5 0.00015 39.2 5.8 90 278-379 166-263 (343)
388 3pi7_A NADH oxidoreductase; gr 73.1 4.4 0.00015 39.3 5.8 82 287-380 177-265 (349)
389 2g5c_A Prephenate dehydrogenas 72.7 25 0.00085 32.6 10.8 86 280-376 4-94 (281)
390 3c85_A Putative glutathione-re 72.5 41 0.0014 28.8 11.5 107 280-402 42-156 (183)
391 2vn8_A Reticulon-4-interacting 72.5 6.9 0.00024 38.3 7.1 90 278-378 185-280 (375)
392 4eez_A Alcohol dehydrogenase 1 72.3 20 0.0007 34.2 10.3 89 279-378 166-263 (348)
393 3gaz_A Alcohol dehydrogenase s 71.9 15 0.0005 35.5 9.2 86 278-378 152-246 (343)
394 1id1_A Putative potassium chan 66.8 27 0.00091 29.2 8.8 105 280-400 6-120 (153)
395 1zsy_A Mitochondrial 2-enoyl t 66.3 25 0.00087 33.9 9.6 90 278-378 169-270 (357)
396 2py6_A Methyltransferase FKBM; 65.7 10 0.00034 38.1 6.7 36 276-313 226-265 (409)
397 2cf5_A Atccad5, CAD, cinnamyl 65.3 5.6 0.00019 38.8 4.6 91 278-379 182-276 (357)
398 1eg2_A Modification methylase 65.3 5.6 0.00019 38.7 4.6 40 278-319 244-286 (319)
399 1yqd_A Sinapyl alcohol dehydro 64.7 7.1 0.00024 38.2 5.2 90 278-378 189-282 (366)
400 4ezb_A Uncharacterized conserv 63.6 67 0.0023 30.6 12.0 110 280-404 27-145 (317)
401 2km1_A Protein DRE2; yeast, an 63.4 3.5 0.00012 35.5 2.4 61 333-403 54-114 (136)
402 2qrv_A DNA (cytosine-5)-methyl 61.7 11 0.00039 36.2 6.0 65 279-345 18-90 (295)
403 3g0o_A 3-hydroxyisobutyrate de 60.9 45 0.0015 31.4 10.1 111 279-403 9-125 (303)
404 3dmg_A Probable ribosomal RNA 59.9 23 0.0008 35.1 8.1 108 278-396 47-154 (381)
405 3swr_A DNA (cytosine-5)-methyl 59.3 87 0.003 35.3 13.3 122 279-403 542-698 (1002)
406 3c24_A Putative oxidoreductase 59.3 52 0.0018 30.5 10.1 83 279-375 13-98 (286)
407 2aef_A Calcium-gated potassium 58.5 42 0.0014 30.1 9.1 85 279-376 11-103 (234)
408 3b1f_A Putative prephenate deh 58.1 59 0.002 30.1 10.3 86 279-375 8-98 (290)
409 4dcm_A Ribosomal RNA large sub 57.0 16 0.00056 36.1 6.4 89 279-378 41-136 (375)
410 4e21_A 6-phosphogluconate dehy 56.7 44 0.0015 32.8 9.4 115 280-406 25-141 (358)
411 4e12_A Diketoreductase; oxidor 55.8 44 0.0015 31.2 8.9 88 278-375 5-118 (283)
412 1p5d_X PMM, phosphomannomutase 53.6 71 0.0024 32.3 10.7 134 260-409 155-309 (463)
413 1gu7_A Enoyl-[acyl-carrier-pro 53.5 37 0.0013 32.7 8.2 92 278-379 169-276 (364)
414 2g1u_A Hypothetical protein TM 53.2 71 0.0024 26.6 9.1 107 278-400 20-133 (155)
415 3ce6_A Adenosylhomocysteinase; 52.0 33 0.0011 35.5 7.8 87 278-380 275-363 (494)
416 1wqa_A Phospho-sugar mutase; a 50.7 81 0.0028 31.8 10.5 133 261-409 154-310 (455)
417 3k6j_A Protein F01G10.3, confi 50.6 1.3E+02 0.0044 30.7 12.0 95 273-375 50-163 (460)
418 2ew2_A 2-dehydropantoate 2-red 50.0 1.1E+02 0.0037 28.2 10.7 88 280-376 6-106 (316)
419 1lnq_A MTHK channels, potassiu 49.1 1.1E+02 0.0037 29.0 10.7 85 279-376 117-209 (336)
420 3qha_A Putative oxidoreductase 48.7 72 0.0024 29.9 9.2 108 280-403 18-128 (296)
421 4ft4_B DNA (cytosine-5)-methyl 48.5 1.4E+02 0.0047 32.2 12.5 36 279-316 214-256 (784)
422 1zcj_A Peroxisomal bifunctiona 48.5 1.2E+02 0.0042 30.6 11.5 89 276-375 36-147 (463)
423 3hn7_A UDP-N-acetylmuramate-L- 48.4 53 0.0018 33.9 8.8 114 281-402 23-152 (524)
424 3pdk_A Phosphoglucosamine muta 48.2 1.3E+02 0.0044 30.6 11.6 133 261-409 177-330 (469)
425 2f7l_A 455AA long hypothetical 47.9 66 0.0023 32.5 9.3 133 261-409 152-310 (455)
426 1bg6_A N-(1-D-carboxylethyl)-L 47.6 67 0.0023 30.5 9.0 90 279-376 6-107 (359)
427 3uw2_A Phosphoglucomutase/phos 46.8 2.2E+02 0.0076 29.0 13.2 133 261-409 178-331 (485)
428 3av4_A DNA (cytosine-5)-methyl 43.7 3E+02 0.01 32.0 14.7 122 279-403 853-1009(1330)
429 3ond_A Adenosylhomocysteinase; 43.7 83 0.0029 32.5 9.3 84 278-378 266-352 (488)
430 3ius_A Uncharacterized conserv 43.6 1.8E+02 0.0063 26.1 12.6 63 279-348 7-73 (286)
431 2hmt_A YUAA protein; RCK, KTN, 41.8 1.3E+02 0.0044 23.8 9.4 106 280-401 9-120 (144)
432 2cvz_A Dehydrogenase, 3-hydrox 41.7 1.4E+02 0.0048 27.2 9.9 108 280-403 4-113 (289)
433 3tri_A Pyrroline-5-carboxylate 40.0 70 0.0024 29.9 7.6 82 280-374 6-94 (280)
434 3trk_A Nonstructural polyprote 39.2 16 0.00056 35.0 2.8 68 336-405 209-284 (324)
435 3k96_A Glycerol-3-phosphate de 39.1 69 0.0024 31.3 7.6 86 280-376 32-131 (356)
436 4had_A Probable oxidoreductase 38.8 78 0.0027 30.1 7.9 65 277-345 24-93 (350)
437 3d1l_A Putative NADP oxidoredu 38.8 1.2E+02 0.0041 27.5 8.9 83 280-375 13-99 (266)
438 1wg8_A Predicted S-adenosylmet 38.3 16 0.00054 35.3 2.6 43 356-401 211-253 (285)
439 2dpo_A L-gulonate 3-dehydrogen 38.3 1.7E+02 0.0057 28.1 10.1 89 278-375 7-120 (319)
440 4a27_A Synaptic vesicle membra 38.3 46 0.0016 31.9 6.1 87 278-379 144-239 (349)
441 3iei_A Leucine carboxyl methyl 38.1 2.9E+02 0.0097 26.8 15.0 99 277-380 91-231 (334)
442 2h78_A Hibadh, 3-hydroxyisobut 37.9 1.9E+02 0.0066 26.7 10.4 111 279-403 5-120 (302)
443 3gvp_A Adenosylhomocysteinase 37.9 49 0.0017 33.7 6.4 85 278-378 221-307 (435)
444 3pef_A 6-phosphogluconate dehy 37.8 77 0.0026 29.3 7.5 109 280-403 4-118 (287)
445 3mog_A Probable 3-hydroxybutyr 37.7 1.9E+02 0.0065 29.5 11.0 86 280-375 8-117 (483)
446 3qsg_A NAD-binding phosphogluc 37.7 1.4E+02 0.0049 28.1 9.5 113 279-404 26-143 (312)
447 3hwr_A 2-dehydropantoate 2-red 37.3 2.5E+02 0.0086 26.4 11.2 84 280-376 22-118 (318)
448 3i83_A 2-dehydropantoate 2-red 36.9 1.1E+02 0.0038 28.8 8.6 84 280-376 5-103 (320)
449 2rir_A Dipicolinate synthase, 36.8 62 0.0021 30.5 6.7 105 278-402 158-265 (300)
450 3d4o_A Dipicolinate synthase s 36.5 67 0.0023 30.2 6.8 105 278-402 156-263 (293)
451 3eag_A UDP-N-acetylmuramate:L- 36.4 1E+02 0.0035 29.4 8.3 67 279-348 6-76 (326)
452 4gbj_A 6-phosphogluconate dehy 35.7 43 0.0015 31.8 5.3 111 282-406 10-123 (297)
453 4dkj_A Cytosine-specific methy 35.3 2E+02 0.0069 28.6 10.5 20 279-298 12-31 (403)
454 3dfz_A SIRC, precorrin-2 dehyd 34.6 96 0.0033 28.4 7.3 65 278-345 32-98 (223)
455 1np3_A Ketol-acid reductoisome 34.4 75 0.0026 30.6 7.0 83 280-375 19-104 (338)
456 4dll_A 2-hydroxy-3-oxopropiona 34.3 2.9E+02 0.0098 26.0 11.1 110 279-403 33-147 (320)
457 3ktd_A Prephenate dehydrogenas 33.9 41 0.0014 32.9 4.9 84 278-372 9-95 (341)
458 3gg2_A Sugar dehydrogenase, UD 33.7 2.6E+02 0.009 28.0 11.1 91 281-377 6-121 (450)
459 2hwk_A Helicase NSP2; rossman 33.3 59 0.002 31.5 5.7 69 337-407 205-281 (320)
460 3pxx_A Carveol dehydrogenase; 32.9 2E+02 0.0068 26.1 9.4 100 278-377 11-152 (287)
461 3ulk_A Ketol-acid reductoisome 32.8 1.4E+02 0.0047 30.8 8.6 90 278-380 38-134 (491)
462 2zwa_A Leucine carboxyl methyl 32.7 2.4E+02 0.0084 29.7 11.2 114 264-379 95-255 (695)
463 1f0y_A HCDH, L-3-hydroxyacyl-C 32.5 2.6E+02 0.0089 25.9 10.3 36 277-314 15-52 (302)
464 2izz_A Pyrroline-5-carboxylate 32.2 73 0.0025 30.3 6.4 85 280-375 25-115 (322)
465 4gua_A Non-structural polyprot 32.1 36 0.0012 36.0 4.2 64 332-396 216-287 (670)
466 1txg_A Glycerol-3-phosphate de 32.1 1.2E+02 0.004 28.4 7.8 88 280-376 3-102 (335)
467 4a7p_A UDP-glucose dehydrogena 32.0 1.6E+02 0.0054 29.8 9.1 113 275-397 7-146 (446)
468 4hkt_A Inositol 2-dehydrogenas 31.7 1.3E+02 0.0046 28.2 8.2 61 280-345 6-70 (331)
469 1pjc_A Protein (L-alanine dehy 31.3 18 0.00063 35.4 1.9 95 278-377 168-266 (361)
470 3ged_A Short-chain dehydrogena 30.9 1.2E+02 0.0042 28.0 7.5 68 278-347 3-84 (247)
471 3obb_A Probable 3-hydroxyisobu 30.7 1.1E+02 0.0036 29.2 7.2 110 281-404 7-121 (300)
472 3rc1_A Sugar 3-ketoreductase; 30.5 1.5E+02 0.0053 28.3 8.5 62 280-345 30-96 (350)
473 1h2b_A Alcohol dehydrogenase; 30.2 1.5E+02 0.005 28.4 8.3 91 278-379 188-286 (359)
474 2pv7_A T-protein [includes: ch 30.0 1.9E+02 0.0066 26.9 8.9 29 280-308 24-55 (298)
475 2y0c_A BCEC, UDP-glucose dehyd 29.9 2.7E+02 0.0092 28.2 10.5 94 280-376 11-126 (478)
476 3pdu_A 3-hydroxyisobutyrate de 29.7 66 0.0022 29.9 5.5 108 281-403 5-118 (287)
477 3doj_A AT3G25530, dehydrogenas 29.5 1E+02 0.0034 29.1 6.8 110 279-403 23-138 (310)
478 3cea_A MYO-inositol 2-dehydrog 29.2 2.3E+02 0.0077 26.7 9.4 64 279-345 10-78 (346)
479 3slk_A Polyketide synthase ext 28.6 37 0.0013 37.1 3.9 84 279-378 348-442 (795)
480 3n58_A Adenosylhomocysteinase; 28.1 88 0.003 32.1 6.3 83 278-378 248-334 (464)
481 3h9u_A Adenosylhomocysteinase; 28.0 82 0.0028 32.1 6.1 83 279-377 213-297 (436)
482 3ghy_A Ketopantoate reductase 27.9 95 0.0033 29.6 6.4 83 280-376 6-102 (335)
483 3u3x_A Oxidoreductase; structu 27.9 3.5E+02 0.012 25.8 10.6 62 281-345 30-95 (361)
484 3oig_A Enoyl-[acyl-carrier-pro 27.8 2.6E+02 0.0091 24.9 9.2 101 278-378 8-147 (266)
485 4gwg_A 6-phosphogluconate dehy 27.6 2.5E+02 0.0087 28.6 9.8 115 281-405 8-128 (484)
486 2vhw_A Alanine dehydrogenase; 27.6 32 0.0011 34.0 2.9 96 278-378 169-268 (377)
487 3hn2_A 2-dehydropantoate 2-red 27.5 96 0.0033 29.2 6.3 86 280-376 5-101 (312)
488 2eez_A Alanine dehydrogenase; 27.3 39 0.0013 33.1 3.5 96 278-378 167-266 (369)
489 1v8b_A Adenosylhomocysteinase; 26.8 1E+02 0.0035 31.7 6.6 81 278-376 258-342 (479)
490 3p2y_A Alanine dehydrogenase/p 26.7 32 0.0011 34.4 2.7 92 278-375 185-299 (381)
491 3gt0_A Pyrroline-5-carboxylate 26.0 54 0.0019 29.7 4.0 83 280-375 5-94 (247)
492 1evy_A Glycerol-3-phosphate de 25.9 74 0.0025 30.6 5.2 86 279-375 17-121 (366)
493 4g65_A TRK system potassium up 25.7 60 0.0021 32.9 4.7 60 281-344 7-74 (461)
494 1vpd_A Tartronate semialdehyde 25.6 3.3E+02 0.011 24.9 9.6 109 280-403 8-122 (299)
495 1tlt_A Putative oxidoreductase 25.4 1.3E+02 0.0043 28.3 6.7 106 280-400 8-118 (319)
496 3i3w_A Phosphoglucosamine muta 25.1 4.3E+02 0.015 26.3 11.0 116 275-409 172-306 (443)
497 2ho3_A Oxidoreductase, GFO/IDH 24.7 2.7E+02 0.0094 25.9 9.0 62 280-345 4-69 (325)
498 4dio_A NAD(P) transhydrogenase 24.6 64 0.0022 32.5 4.5 42 278-321 191-234 (405)
499 2zyd_A 6-phosphogluconate dehy 24.5 3.1E+02 0.01 27.8 9.8 111 281-404 19-137 (480)
500 3tka_A Ribosomal RNA small sub 24.5 28 0.00094 34.5 1.7 29 356-384 252-280 (347)
No 1
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.70 E-value=3.3e-16 Score=149.11 Aligned_cols=127 Identities=17% Similarity=0.239 Sum_probs=102.9
Q ss_pred CccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 276 TIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
...+|||+|||+|.++..+++++.+|+++ |+++.|++.++++ + .+.++++|++.+|+++++||+|++..+++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAF--DLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEE--ESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEE--eCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 33467999999999999999998899988 7788998887765 3 38899999999999999999999999995
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc---------------------CcHHHHHHHHHHcCCEEEEEEec
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS---------------------QLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~---------------------~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
+ .++ ...++.++.|+|||||+|++.++..... ...+.+..+++++||+.+.+...
T Consensus 115 ~-~~d--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 115 H-FPN--PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp G-CSC--HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred h-cCC--HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 5 566 7899999999999999999975443211 12356888999999998776643
No 2
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.68 E-value=8e-16 Score=145.67 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=111.5
Q ss_pred HHHHccCCCCCccEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhcC---CeeEEEcccccCCCCCCceeE
Q 043503 266 DQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASRG---LISMHISVSQRLPFFENTLDI 341 (430)
Q Consensus 266 d~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~rg---~i~~~~~d~~~lpf~d~sfDl 341 (430)
..++..++.....+|||+|||+|.++..+++++. +|+++ |+++.+++.++++. .+.++.+|+..+++++++||+
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGI--DLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEE--ECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEE
Confidence 3445555544446679999999999999999977 89988 77789999988773 489999999999998999999
Q ss_pred EEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc------------C--c-----------------------
Q 043503 342 VHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF------------G--S----------------------- 384 (430)
Q Consensus 342 V~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~------------~--~----------------------- 384 (430)
|++..++++ .++ ...++.++.|+|||||+++++..... . .
T Consensus 112 v~~~~~l~~-~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (253)
T 3g5l_A 112 VLSSLALHY-IAS--FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGED 188 (253)
T ss_dssp EEEESCGGG-CSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEE
T ss_pred EEEchhhhh-hhh--HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeecccc
Confidence 999999965 555 78999999999999999998632110 0 0
Q ss_pred -----CcHHHHHHHHHHcCCEEEEEEecccc
Q 043503 385 -----QLNETYVPMLDRIGFKKLRWNVGMKL 410 (430)
Q Consensus 385 -----~~~~~~~~ll~~~Gfk~l~~~~~~k~ 410 (430)
...+++..+++++||+++.+......
T Consensus 189 ~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~ 219 (253)
T 3g5l_A 189 VQKYHRTVTTYIQTLLKNGFQINSVIEPEPA 219 (253)
T ss_dssp EEEECCCHHHHHHHHHHTTEEEEEEECCCCC
T ss_pred CccEecCHHHHHHHHHHcCCeeeeeecCCCc
Confidence 03477999999999999987755443
No 3
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.68 E-value=9.1e-16 Score=145.30 Aligned_cols=139 Identities=19% Similarity=0.226 Sum_probs=113.7
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCCCce
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFENTL 339 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d~sf 339 (430)
++.++..++.....+|||+|||+|.++..++++ +.+|+++ |+++.+++.++++ ..+.++++|+..+++++++|
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 121 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGI--DICSNIVNMANERVSGNNKIIFEANDILTKEFPENNF 121 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEE--ESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEE--eCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcE
Confidence 456666555444557799999999999999998 8999998 7778999999887 35899999999999999999
Q ss_pred eEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc------------------CcHHHHHHHHHHcCCEE
Q 043503 340 DIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS------------------QLNETYVPMLDRIGFKK 401 (430)
Q Consensus 340 DlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~------------------~~~~~~~~ll~~~Gfk~ 401 (430)
|+|++..+++| ++......++.++.|+|||||++++.++..... ...+.+..+++++||+.
T Consensus 122 D~v~~~~~l~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 200 (266)
T 3ujc_A 122 DLIYSRDAILA-LSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKN 200 (266)
T ss_dssp EEEEEESCGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEE
T ss_pred EEEeHHHHHHh-cChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeE
Confidence 99999999966 544458899999999999999999987654330 12456889999999998
Q ss_pred EEEEe
Q 043503 402 LRWNV 406 (430)
Q Consensus 402 l~~~~ 406 (430)
+....
T Consensus 201 ~~~~~ 205 (266)
T 3ujc_A 201 VVSKD 205 (266)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87653
No 4
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.68 E-value=1.1e-16 Score=148.17 Aligned_cols=128 Identities=9% Similarity=-0.053 Sum_probs=99.7
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc------------------CCeeEEEcccccCCCCC-Cc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR------------------GLISMHISVSQRLPFFE-NT 338 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r------------------g~i~~~~~d~~~lpf~d-~s 338 (430)
.+|||+|||+|.++..++++|.+|+++ |+|+.|++.|+++ ..+.++++|+..+++++ ++
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~~V~gv--D~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGYHVVGA--ELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCCEEEEE--EECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CEEEEeCCCCcHhHHHHHHCCCeEEEE--eCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 456999999999999999999999998 7789999988765 24789999999999765 89
Q ss_pred eeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEee-cccc----CcC---cHHHHHHHHHHcCCEEEEEEeccc
Q 043503 339 LDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR-FFCF----GSQ---LNETYVPMLDRIGFKKLRWNVGMK 409 (430)
Q Consensus 339 fDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~-f~~~----~~~---~~~~~~~ll~~~Gfk~l~~~~~~k 409 (430)
||+|++..++++ ++......++.++.|+|||||++++.. .+.. +.. ..+++..++.. ||++..+.....
T Consensus 102 fD~v~~~~~l~~-l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 102 CAAFYDRAAMIA-LPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp EEEEEEESCGGG-SCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEESSC
T ss_pred EEEEEECcchhh-CCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEeccccc
Confidence 999999888854 555557789999999999999844332 2211 111 24678888888 999887665443
No 5
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=4.8e-16 Score=142.18 Aligned_cols=126 Identities=14% Similarity=0.108 Sum_probs=106.5
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC-CeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG-LISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg-~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
+|||+|||+|.++..+++++.+|+++ |+++.+++.++++. .+.++.+|+..+++++++||+|++..+++| .+.+..
T Consensus 44 ~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~ 120 (203)
T 3h2b_A 44 VILDVGSGTGRWTGHLASLGHQIEGL--EPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIH-MGPGEL 120 (203)
T ss_dssp CEEEETCTTCHHHHHHHHTTCCEEEE--CCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTT-CCTTTH
T ss_pred eEEEecCCCCHHHHHHHhcCCeEEEE--eCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhc-CCHHHH
Confidence 35999999999999999999999998 77899999998874 489999999999988999999999999966 443358
Q ss_pred HHHHHHHHHhccCCcEEEEeeccccCc------------CcHHHHHHHHHHcCCEEEEEEec
Q 043503 358 EFTLYDIYRLLRPGGIFWLDRFFCFGS------------QLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 358 ~~~L~ei~RvLrPGG~lvl~~f~~~~~------------~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
..++.++.++|+|||++++..+..... ...+.+.++++++||+++.....
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 999999999999999999987553221 12578999999999999987643
No 6
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.64 E-value=1.9e-15 Score=139.72 Aligned_cols=126 Identities=13% Similarity=0.132 Sum_probs=102.5
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC--CeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG--LISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg--~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
.+|||+|||+|.++..+++++.+++++ |+++.+++.++++. .+.++.+|+..++++ ++||+|++..++++ .++.
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~-~~~~ 122 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGRTVYGI--EPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHH-LTDD 122 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTCEEEEE--CSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGG-SCHH
T ss_pred CeEEEeCCCCCHHHHHHHhCCCeEEEE--eCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhc-CChH
Confidence 456999999999999999999999998 77899999988773 488999999999887 89999999999955 5653
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccCcC---------------------------cHHHHHHHHHHcCCEEEEEEec
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ---------------------------LNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~---------------------------~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
....++.++.|+|||||++++.++...... ..+.+..+++++||+++.....
T Consensus 123 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 123 EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc
Confidence 344599999999999999999864432211 1256888999999998775543
No 7
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.64 E-value=3.8e-15 Score=139.04 Aligned_cols=134 Identities=20% Similarity=0.146 Sum_probs=105.9
Q ss_pred HHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC--CeeEEEcccccCCCCCCcee
Q 043503 263 YGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG--LISMHISVSQRLPFFENTLD 340 (430)
Q Consensus 263 ~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg--~i~~~~~d~~~lpf~d~sfD 340 (430)
+.++.+....++.+ |||||||+|.++..+++++.+|+++ |+++.+++.++++. .+.++++|++.+ +++++||
T Consensus 32 ~~~~~l~~~~~~~~---vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD 105 (250)
T 2p7i_A 32 FMVRAFTPFFRPGN---LLELGSFKGDFTSRLQEHFNDITCV--EASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYD 105 (250)
T ss_dssp HHHHHHGGGCCSSC---EEEESCTTSHHHHHHTTTCSCEEEE--ESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEE
T ss_pred HHHHHHHhhcCCCc---EEEECCCCCHHHHHHHHhCCcEEEE--eCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCccc
Confidence 33444443444443 5999999999999999998899988 77799999988774 588999998887 4788999
Q ss_pred EEEEccchhhcCCchhHHHHHHHHH-HhccCCcEEEEeeccccC-----------------------------cCcHHHH
Q 043503 341 IVHSMHVLSNWIPDSMLEFTLYDIY-RLLRPGGIFWLDRFFCFG-----------------------------SQLNETY 390 (430)
Q Consensus 341 lV~~~~~L~~~~~d~~l~~~L~ei~-RvLrPGG~lvl~~f~~~~-----------------------------~~~~~~~ 390 (430)
+|++..+++| +++ ...++.++. |+|||||++++..+.... .-..+.+
T Consensus 106 ~v~~~~~l~~-~~~--~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (250)
T 2p7i_A 106 NIVLTHVLEH-IDD--PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTL 182 (250)
T ss_dssp EEEEESCGGG-CSS--HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHH
T ss_pred EEEEhhHHHh-hcC--HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHH
Confidence 9999999966 555 689999999 999999999997643210 0123578
Q ss_pred HHHHHHcCCEEEEEE
Q 043503 391 VPMLDRIGFKKLRWN 405 (430)
Q Consensus 391 ~~ll~~~Gfk~l~~~ 405 (430)
..+++++||+++...
T Consensus 183 ~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 183 ERDASRAGLQVTYRS 197 (250)
T ss_dssp HHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCeEEEEe
Confidence 899999999998865
No 8
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.64 E-value=3.9e-15 Score=140.49 Aligned_cols=124 Identities=18% Similarity=0.253 Sum_probs=101.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~ 351 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ + .+.++.+|++.+++++++||+|++..+++|
T Consensus 23 ~~vLDiGcG~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~- 99 (239)
T 1xxl_A 23 HRVLDIGAGAGHTALAFSPYVQECIGV--DATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHH- 99 (239)
T ss_dssp CEEEEESCTTSHHHHHHGGGSSEEEEE--ESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGG-
T ss_pred CEEEEEccCcCHHHHHHHHhCCEEEEE--ECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhh-
Confidence 456999999999999999998899988 6678888877654 3 388999999999999999999999999966
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeeccccCc---------------------CcHHHHHHHHHHcCCEEEEEEe
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS---------------------QLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~---------------------~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
.++ ...++.++.|+|||||++++.++..... ...+.+..+++++||+.+....
T Consensus 100 ~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 173 (239)
T 1xxl_A 100 FSD--VRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQK 173 (239)
T ss_dssp CSC--HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred ccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEe
Confidence 455 7899999999999999999976543211 1245688899999999877654
No 9
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.64 E-value=2.7e-15 Score=141.52 Aligned_cols=140 Identities=12% Similarity=0.121 Sum_probs=110.3
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcC----CeeEEEcccccCCCCCCce
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRG----LISMHISVSQRLPFFENTL 339 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg----~i~~~~~d~~~lpf~d~sf 339 (430)
+..++..++.....+|||+|||+|.++..++++ ..+|+++ |+++.+++.++++. .+.++++|+..+++++++|
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLL--EPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEE--ESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCE
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEE--eCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCe
Confidence 345555554444567799999999999999988 4568888 77799999888763 4889999999999888999
Q ss_pred eEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC------------cHHHHHHHHHHcCCEEEEEEec
Q 043503 340 DIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ------------LNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 340 DlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~------------~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
|+|++..+++| .++.....++.++.|+|||||++++.+....... ..+.+..+++++||++++....
T Consensus 160 D~v~~~~~l~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 160 DLIVIQWTAIY-LTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp EEEEEESCGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred EEEEEcchhhh-CCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 99999999965 5444588999999999999999999875321111 2367999999999999886543
No 10
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.63 E-value=1.3e-15 Score=140.40 Aligned_cols=140 Identities=19% Similarity=0.194 Sum_probs=111.5
Q ss_pred HHHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEE
Q 043503 264 GIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVH 343 (430)
Q Consensus 264 ~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~ 343 (430)
.+..++..++. ..+|||+|||+|.++..+++++.+|+++ |+++.+++.++++-.+.+..+|+..++ ++++||+|+
T Consensus 33 ~~~~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 33 TLTKFLGELPA--GAKILELGCGAGYQAEAMLAAGFDVDAT--DGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp HHHHHHTTSCT--TCEEEESSCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEE
T ss_pred HHHHHHHhcCC--CCcEEEECCCCCHHHHHHHHcCCeEEEE--CCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEE
Confidence 35555554442 2457999999999999999999999998 677899999888755678889998888 789999999
Q ss_pred EccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc-----------CcHHHHHHHHHHcC-CEEEEEEeccc
Q 043503 344 SMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-----------QLNETYVPMLDRIG-FKKLRWNVGMK 409 (430)
Q Consensus 344 ~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-----------~~~~~~~~ll~~~G-fk~l~~~~~~k 409 (430)
+..++++ .+.+....++.++.|+|||||++++........ ...+.+..+++++| |+++.......
T Consensus 108 ~~~~l~~-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~ 184 (211)
T 3e23_A 108 AHACLLH-VPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEG 184 (211)
T ss_dssp ECSCGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred ecCchhh-cCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccC
Confidence 9999965 554458899999999999999999975433221 13467999999999 99988775443
No 11
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.63 E-value=7.4e-15 Score=140.37 Aligned_cols=138 Identities=21% Similarity=0.328 Sum_probs=109.2
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
++.++..++.....+|||||||+|.++..++++ +.+|+++ |+++.+++.++++ | .+.++.+|+..+|+++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGI--SISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEE--eCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 445555444444456799999999999999986 8899998 6778888777654 3 3899999999999999
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC---------------------cHHHHHHHHH
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ---------------------LNETYVPMLD 395 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~---------------------~~~~~~~ll~ 395 (430)
++||+|++..+++| +++ ...++.++.|+|||||++++.++...... ..+.+..+++
T Consensus 128 ~~fD~v~~~~~l~~-~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 204 (273)
T 3bus_A 128 ASFDAVWALESLHH-MPD--RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVR 204 (273)
T ss_dssp TCEEEEEEESCTTT-SSC--HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH
T ss_pred CCccEEEEechhhh-CCC--HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHH
Confidence 99999999999965 565 68899999999999999999876532210 1256888999
Q ss_pred HcCCEEEEEEec
Q 043503 396 RIGFKKLRWNVG 407 (430)
Q Consensus 396 ~~Gfk~l~~~~~ 407 (430)
++||+++.+...
T Consensus 205 ~aGf~~~~~~~~ 216 (273)
T 3bus_A 205 QAELVVTSTVDI 216 (273)
T ss_dssp HTTCEEEEEEEC
T ss_pred HcCCeEEEEEEC
Confidence 999999887643
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.63 E-value=3e-15 Score=144.77 Aligned_cols=98 Identities=19% Similarity=0.220 Sum_probs=83.2
Q ss_pred EEEEEcCCccHHHHHHHHc----CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccc
Q 043503 279 IGLDIGGGTGTFAARMRER----NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHV 347 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~----g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~ 347 (430)
+|||+|||+|.++..++++ |++|+|+ |+++.|++.|+++ + .+.++++|+..+|++ .||+|+++.+
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~~v~gv--D~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~ 148 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNCKIIAI--DNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFT 148 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSCEEEEE--ESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESC
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCCEEEEE--ECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeee
Confidence 4599999999999999986 6789988 7789999998865 2 388999999998864 5999999999
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
+ |++++.....+|.+++|+|||||.|++.+...
T Consensus 149 l-~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 149 L-QFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp G-GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred e-eecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 8 55666557789999999999999999987554
No 13
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.62 E-value=4.4e-15 Score=139.85 Aligned_cols=124 Identities=19% Similarity=0.228 Sum_probs=102.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC--CCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL--PFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l--pf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
.+|||||||+|.++..+++++.+|+++ |+++.+++.++++ +.++.+|...+ ++++++||+|++..+++| +++.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~-~~~~ 117 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGIESIGV--DINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEH-LDPE 117 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTCCEEEE--CSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGG-SCGG
T ss_pred CeEEEEeCCCCHHHHHHHhCCCcEEEE--ECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhh-CCcH
Confidence 346999999999999999999999888 7789999999887 78888888775 788999999999999966 5654
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccCc---------------CcHHHHHHHHHHcCCEEEEEEe
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFGS---------------QLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~~---------------~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
.+..++.++.|+|||||++++..+..... -..+.+..+++++||+.+....
T Consensus 118 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 118 RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 57899999999999999999976543210 1236789999999999887663
No 14
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.62 E-value=4.4e-15 Score=137.18 Aligned_cols=123 Identities=14% Similarity=0.192 Sum_probs=102.4
Q ss_pred cEEEEEcCCccHHHHHHHHcC---CEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccch
Q 043503 278 RIGLDIGGGTGTFAARMRERN---VTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g---~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L 348 (430)
.+|||+|||+|.++..+++.+ .+|+++ |+++.+++.++++ + .+.++.+|+..+++++++||+|++..++
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 116 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAI--DVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTF 116 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEE--ESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEE--ECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhh
Confidence 456999999999999999885 789988 6678888777655 3 4889999999999999999999999999
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC---------cHHHHHHHHHHcCCEEEEEE
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ---------LNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~---------~~~~~~~ll~~~Gfk~l~~~ 405 (430)
++ .++ ...++.++.|+|+|||++++.++...... ..+.+..++++.||+.++..
T Consensus 117 ~~-~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 117 HE-LSE--PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp GG-CSS--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred hh-cCC--HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 66 555 78999999999999999999876543221 24679999999999988754
No 15
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.62 E-value=3.8e-15 Score=140.88 Aligned_cols=135 Identities=13% Similarity=0.143 Sum_probs=105.1
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
++.++.........+|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++++|+..+++ +
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~ 101 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGI--DMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-N 101 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-S
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEE--eCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-C
Confidence 445554443334456799999999999999987 7899888 7788888877654 3 48999999999887 8
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC------------------cHHHHHHHHHHcC
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ------------------LNETYVPMLDRIG 398 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~------------------~~~~~~~ll~~~G 398 (430)
++||+|++..++++ .++ ...+|.++.|+|||||++++.+....... ....+..+++++|
T Consensus 102 ~~fD~V~~~~~~~~-~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 178 (256)
T 1nkv_A 102 EKCDVAACVGATWI-AGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLG 178 (256)
T ss_dssp SCEEEEEEESCGGG-TSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTT
T ss_pred CCCCEEEECCChHh-cCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCC
Confidence 89999999999955 555 67899999999999999999764422111 2256889999999
Q ss_pred CEEEEEE
Q 043503 399 FKKLRWN 405 (430)
Q Consensus 399 fk~l~~~ 405 (430)
|+.+...
T Consensus 179 f~~~~~~ 185 (256)
T 1nkv_A 179 YDVVEMV 185 (256)
T ss_dssp BCCCEEE
T ss_pred CeeEEEE
Confidence 9987654
No 16
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.62 E-value=1.1e-14 Score=136.09 Aligned_cols=125 Identities=18% Similarity=0.212 Sum_probs=101.3
Q ss_pred ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 277 IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
..+|||+|||+|.++..++++ +.+++++ |+++.+++.++++ +.+.++.+|+..++++ ++||+|++..++++
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLV--DMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHH 121 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEE--ESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEE--ECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCcccc
Confidence 356799999999999999998 7899988 6778999888876 3589999999998877 89999999999966
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC-------------------------------------cHHHHHHH
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ-------------------------------------LNETYVPM 393 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~-------------------------------------~~~~~~~l 393 (430)
.++.....++.++.|+|||||++++.++...... ..+++..+
T Consensus 122 -~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (234)
T 3dtn_A 122 -LEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNW 200 (234)
T ss_dssp -SCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHH
Confidence 5654455799999999999999999875532211 12456678
Q ss_pred HHHcCCEEEEEE
Q 043503 394 LDRIGFKKLRWN 405 (430)
Q Consensus 394 l~~~Gfk~l~~~ 405 (430)
++++||+.++..
T Consensus 201 l~~aGF~~v~~~ 212 (234)
T 3dtn_A 201 LKEAGFRDVSCI 212 (234)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHcCCCceeee
Confidence 999999987654
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.62 E-value=5.7e-15 Score=143.25 Aligned_cols=125 Identities=22% Similarity=0.247 Sum_probs=103.2
Q ss_pred ccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccch
Q 043503 277 IRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~L 348 (430)
..+|||+|||+|.++..++++ +.+|+++ |+++.+++.++++ | .+.++.+|+..+|+++++||+|++..++
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGVSIDCL--NIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEE--ESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCEEEEE--eCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 346799999999999999998 8899988 6778888877654 3 4899999999999999999999999999
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC------------------cHHHHHHHHHHcCCEEEEEEe
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ------------------LNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~------------------~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
+| .++ ...++.++.|+|||||++++.++...... ....+..+++++||+.+....
T Consensus 161 ~~-~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 161 LH-SPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFS 233 (297)
T ss_dssp GG-CSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hh-cCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 66 555 78999999999999999999876532210 234678899999999887653
No 18
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.62 E-value=3e-15 Score=138.88 Aligned_cols=142 Identities=16% Similarity=0.250 Sum_probs=109.6
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C-------CeeEEEcccccCCCCCCceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G-------LISMHISVSQRLPFFENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g-------~i~~~~~d~~~lpf~d~sfDlV~~~~ 346 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.+++.++++ + .+.+..+|+..+++++++||+|++..
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGYSVTGI--DINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CeEEEECCCCCHHHHHHHhCCCeEEEE--ECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc
Confidence 356999999999999999999999998 6678888888764 2 26889999999999899999999999
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC-------------------------------------cCcHHH
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG-------------------------------------SQLNET 389 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~-------------------------------------~~~~~~ 389 (430)
+++++.+......++.++.++|||||++++.++.... ....++
T Consensus 110 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (235)
T 3sm3_A 110 FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKE 189 (235)
T ss_dssp CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHH
T ss_pred hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHH
Confidence 9966433333458999999999999999997653210 013467
Q ss_pred HHHHHHHcCCEEEEEEecc-cccCCCchhHHHh
Q 043503 390 YVPMLDRIGFKKLRWNVGM-KLDRGVKKNEWYF 421 (430)
Q Consensus 390 ~~~ll~~~Gfk~l~~~~~~-k~~~g~~~~~~~l 421 (430)
+..+++++||+++.+.... ....|.....+|+
T Consensus 190 l~~ll~~aGf~~~~~~~~~~~~~~g~~~~~~~i 222 (235)
T 3sm3_A 190 LVFLLTDCRFEIDYFRVKELETRTGNKILGFVI 222 (235)
T ss_dssp HHHHHHTTTEEEEEEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEecceeeccCCccceEEE
Confidence 9999999999999877443 3334444444444
No 19
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.62 E-value=7.5e-16 Score=148.84 Aligned_cols=108 Identities=14% Similarity=0.210 Sum_probs=91.1
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEE
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHS 344 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~ 344 (430)
++.+....+.+ .+|||||||+|.++..|++++.+|+++ |+++.|++.|+++..+.+++++++.+|+++++||+|+|
T Consensus 30 ~~~l~~~~~~~--~~vLDvGcGtG~~~~~l~~~~~~v~gv--D~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 30 FRWLGEVAPAR--GDALDCGCGSGQASLGLAEFFERVHAV--DPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp HHHHHHHSSCS--SEEEEESCTTTTTHHHHHTTCSEEEEE--ESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred HHHHHHhcCCC--CCEEEEcCCCCHHHHHHHHhCCEEEEE--eCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEE
Confidence 34444444432 357999999999999999999999998 77899999888777799999999999999999999999
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..++ ||.+ ...++.++.|+|||||.|++..+.
T Consensus 106 ~~~~-h~~~---~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 106 AQAM-HWFD---LDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp CSCC-TTCC---HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eeeh-hHhh---HHHHHHHHHHHcCCCCEEEEEECC
Confidence 9999 6664 568999999999999999886543
No 20
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.62 E-value=7.7e-15 Score=137.37 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=103.5
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc---CCeeEEEcccccCCCCCCceeEEEEccchhhcCCc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR---GLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r---g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.+++.++++ ..+.++.+|+..+++++++||+|++..+++| .++
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~ 131 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGYKAVGV--DISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW-TEE 131 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS-SSC
T ss_pred CeEEEEcCCCCHHHHHHHHcCCeEEEE--ECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh-ccC
Confidence 356999999999999999999999988 6778999999887 3389999999999998999999999999966 555
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeeccccCc------------------CcHHHHHHHHHHcCCEEEEEE
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFFCFGS------------------QLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~------------------~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
...++.++.++|+|||++++..+..... .....+..+++++||+++...
T Consensus 132 --~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 132 --PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred --HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 7789999999999999999976433211 123568899999999998865
No 21
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.61 E-value=8.8e-15 Score=143.73 Aligned_cols=135 Identities=13% Similarity=0.089 Sum_probs=108.2
Q ss_pred HHHHccCC-CCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 266 DQVLSMKP-LGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 266 d~lL~~~p-~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
+.++..++ .....+|||+|||+|.++..++++ +.+|+++ |+++.+++.++++ | .+.++.+|+..+++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 183 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGV--TLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDK 183 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEE--eCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCC
Confidence 34455444 334456799999999999999998 9999998 6678888877764 3 4899999999999999
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC-------------------cHHHHHHHHHHc
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ-------------------LNETYVPMLDRI 397 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~-------------------~~~~~~~ll~~~ 397 (430)
++||+|++..++++ . + ...++.++.|+|||||++++.++...... ..+.+..+++++
T Consensus 184 ~~fD~V~~~~~l~~-~-~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~a 259 (312)
T 3vc1_A 184 GAVTASWNNESTMY-V-D--LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADN 259 (312)
T ss_dssp TCEEEEEEESCGGG-S-C--HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTT
T ss_pred CCEeEEEECCchhh-C-C--HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHC
Confidence 99999999999966 4 3 78999999999999999998775543311 235688899999
Q ss_pred CCEEEEEEe
Q 043503 398 GFKKLRWNV 406 (430)
Q Consensus 398 Gfk~l~~~~ 406 (430)
||+.+....
T Consensus 260 Gf~~~~~~~ 268 (312)
T 3vc1_A 260 RLVPHTIVD 268 (312)
T ss_dssp TEEEEEEEE
T ss_pred CCEEEEEEe
Confidence 999888664
No 22
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.61 E-value=9.3e-15 Score=134.23 Aligned_cols=127 Identities=15% Similarity=0.139 Sum_probs=104.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCC--eeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGL--ISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~--i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.+++.+++++. +.++.+|+..+ +++++||+|++..+++| .++.
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~--D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~-~~~~ 123 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLADRVTAL--DGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAH-VPDD 123 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSSEEEEE--ESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGG-SCHH
T ss_pred CeEEEECCCCCHHHHHHHhcCCeEEEE--eCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhc-CCHH
Confidence 357999999999999999999999998 677899999988763 88999999887 78899999999999965 6664
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccC------------------------------cCcHHHHHHHHHHcCCEEEEEE
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFG------------------------------SQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~------------------------------~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
....++.++.++|+|||.+++.++.... ....+.+..+++++||++..+.
T Consensus 124 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 124 RFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeee
Confidence 5689999999999999999987653210 0123678999999999977766
Q ss_pred ecc
Q 043503 406 VGM 408 (430)
Q Consensus 406 ~~~ 408 (430)
...
T Consensus 204 ~~~ 206 (218)
T 3ou2_A 204 VHP 206 (218)
T ss_dssp EET
T ss_pred ccc
Confidence 543
No 23
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.61 E-value=1.4e-14 Score=138.53 Aligned_cols=136 Identities=19% Similarity=0.253 Sum_probs=107.0
Q ss_pred HHHHHccCC-CCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCC
Q 043503 265 IDQVLSMKP-LGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFF 335 (430)
Q Consensus 265 id~lL~~~p-~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~ 335 (430)
+..++..++ .....+|||||||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++++|+..++++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 111 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGL--DFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR 111 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEE--eCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC
Confidence 445555443 233456799999999999999998 4599988 6778888877665 3 389999999999988
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC-----------------cHHHHHHHHHHcC
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ-----------------LNETYVPMLDRIG 398 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~-----------------~~~~~~~ll~~~G 398 (430)
+++||+|++..+++++ + ...++.++.++|||||++++.++...... ....+.++++++|
T Consensus 112 ~~~fD~i~~~~~~~~~--~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 187 (267)
T 3kkz_A 112 NEELDLIWSEGAIYNI--G--FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAG 187 (267)
T ss_dssp TTCEEEEEESSCGGGT--C--HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTT
T ss_pred CCCEEEEEEcCCceec--C--HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCC
Confidence 9999999999999664 4 68899999999999999999875422111 2346788999999
Q ss_pred CEEEEEEe
Q 043503 399 FKKLRWNV 406 (430)
Q Consensus 399 fk~l~~~~ 406 (430)
|+.+....
T Consensus 188 f~~v~~~~ 195 (267)
T 3kkz_A 188 YLPVATFI 195 (267)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEE
Confidence 99987654
No 24
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.61 E-value=7.9e-15 Score=141.60 Aligned_cols=136 Identities=24% Similarity=0.327 Sum_probs=107.6
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCC-CCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLP-FFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lp-f~d 336 (430)
+..++...+.. ..+|||||||+|.++..+++.+.+|+++ |+++.+++.++++ | .+.++.+|+..++ +++
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGHQVILC--DLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCCEEEEE--ECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 34455544433 2467999999999999999999999998 6678888888765 3 3889999998888 788
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC------------------------------cCc
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG------------------------------SQL 386 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~------------------------------~~~ 386 (430)
++||+|++..++++ .++ ...++.++.++|||||++++..+.... .-.
T Consensus 135 ~~fD~v~~~~~l~~-~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (285)
T 4htf_A 135 TPVDLILFHAVLEW-VAD--PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRD 211 (285)
T ss_dssp SCEEEEEEESCGGG-CSC--HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBC
T ss_pred CCceEEEECchhhc-ccC--HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCC
Confidence 99999999999965 566 688999999999999999987642110 012
Q ss_pred HHHHHHHHHHcCCEEEEEEe
Q 043503 387 NETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 387 ~~~~~~ll~~~Gfk~l~~~~ 406 (430)
.+.+..+++++||+++....
T Consensus 212 ~~~l~~~l~~aGf~v~~~~~ 231 (285)
T 4htf_A 212 PTQVYLWLEEAGWQIMGKTG 231 (285)
T ss_dssp HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHCCCceeeeee
Confidence 36789999999999987663
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.61 E-value=4.1e-15 Score=136.28 Aligned_cols=135 Identities=19% Similarity=0.311 Sum_probs=104.8
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
.+.++...+.... +|||+|||+|.++..++++ +.+++++ |+++.+++.++++ + .+.++++|+..+++++
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~--D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRAL--DFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEE--ECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 3444443332222 6799999999999999998 7788888 6778888887765 2 4899999999999999
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC--------------------------cCcHHHH
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG--------------------------SQLNETY 390 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~--------------------------~~~~~~~ 390 (430)
++||+|++..+++| .++ ...++.++.|+|+|||++++.+.+... ....+.+
T Consensus 110 ~~~D~v~~~~~l~~-~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (219)
T 3dlc_A 110 NYADLIVSRGSVFF-WED--VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERF 186 (219)
T ss_dssp TCEEEEEEESCGGG-CSC--HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHH
T ss_pred ccccEEEECchHhh-ccC--HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHH
Confidence 99999999999966 455 788999999999999999997533211 0012568
Q ss_pred HHHHHHcCCEEEEEE
Q 043503 391 VPMLDRIGFKKLRWN 405 (430)
Q Consensus 391 ~~ll~~~Gfk~l~~~ 405 (430)
..+++++||+.++..
T Consensus 187 ~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 187 QNVLDEIGISSYEII 201 (219)
T ss_dssp HHHHHHHTCSSEEEE
T ss_pred HHHHHHcCCCeEEEE
Confidence 889999999877654
No 26
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=8.7e-15 Score=137.21 Aligned_cols=129 Identities=16% Similarity=0.104 Sum_probs=104.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC-------CeeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG-------LISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg-------~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++. .+.++++|+..++ ++++||+|++..++++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGL--DISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEE--CSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEE--ECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhc
Confidence 367999999999999999889999988 77889988887651 2889999998877 5669999999999955
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC-------cHHHHHHHHHHcCCEEEEEEecccc
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ-------LNETYVPMLDRIGFKKLRWNVGMKL 410 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~-------~~~~~~~ll~~~Gfk~l~~~~~~k~ 410 (430)
++.+....++.++.++|+|||++++..+...... ..+.+..++++.||+++........
T Consensus 145 -~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 210 (235)
T 3lcc_A 145 -IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENPHA 210 (235)
T ss_dssp -SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECTTC
T ss_pred -CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecCCc
Confidence 5644588999999999999999998765432211 3478999999999999987755443
No 27
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.60 E-value=5.7e-15 Score=136.05 Aligned_cols=126 Identities=17% Similarity=0.263 Sum_probs=102.6
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC---CCCC-CceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL---PFFE-NTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l---pf~d-~sfDlV~~~~~L~~~~~ 353 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.+++.+++++.+.+...+...+ ++.+ .+||+|++..+++ .+
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~--~~ 129 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIEAVGV--DGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL--HQ 129 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCEEEEE--ESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--SS
T ss_pred CEEEEeCCCCCHHHHHHHHCCCEEEEE--cCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh--hh
Confidence 456999999999999999999999988 77799999999998888888887766 5444 4599999999985 44
Q ss_pred chhHHHHHHHHHHhccCCcEEEEeeccccCc----------------------------CcHHHHHHHHHHcCCEEEEEE
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS----------------------------QLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~----------------------------~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
+ ...++.++.++|||||++++..+..... ...+++..+++++||+++...
T Consensus 130 ~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 207 (227)
T 3e8s_A 130 D--IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQ 207 (227)
T ss_dssp C--CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred h--HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEe
Confidence 4 6789999999999999999976532110 034789999999999999877
Q ss_pred eccc
Q 043503 406 VGMK 409 (430)
Q Consensus 406 ~~~k 409 (430)
....
T Consensus 208 ~~~~ 211 (227)
T 3e8s_A 208 EPQH 211 (227)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 6443
No 28
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.59 E-value=2.1e-14 Score=138.54 Aligned_cols=136 Identities=17% Similarity=0.164 Sum_probs=105.6
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
++.++..++.....+|||||||+|.++..++++ +.+|+++ |+++.+++.++++ | .+.+..+|...+|
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gv--d~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGL--TLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEE--ESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEE--ECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---
Confidence 445555544444456799999999999999955 8899988 6778888888765 3 4888999988776
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc-------------------------------C
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-------------------------------Q 385 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-------------------------------~ 385 (430)
++||+|++..+++|+ ++.....++.++.|+|||||++++..+..... .
T Consensus 128 ~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHF-GHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLP 206 (287)
T ss_dssp CCCSEEEEESCGGGT-CTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCC
T ss_pred CCeeEEEEeCchhhc-ChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCC
Confidence 789999999999764 33348899999999999999999877553210 0
Q ss_pred cHHHHHHHHHHcCCEEEEEEe
Q 043503 386 LNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 386 ~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
..+.+..+++++||+++.+..
T Consensus 207 s~~~~~~~l~~aGf~~~~~~~ 227 (287)
T 1kpg_A 207 SIPMVQECASANGFTVTRVQS 227 (287)
T ss_dssp CHHHHHHHHHTTTCEEEEEEE
T ss_pred CHHHHHHHHHhCCcEEEEEEe
Confidence 245688899999999998764
No 29
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.59 E-value=6.4e-15 Score=143.56 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=84.5
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc---------CCeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR---------GLISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r---------g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
+|||||||+|.++..+++++.+|+++ |+++.+++.++++ ..+.++++|+..+++ +++||+|+|.....
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWEVTAL--ELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSI 161 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCCEEEE--ESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHH
T ss_pred cEEEEeccCCHHHHHHHHcCCeEEEE--ECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCccc
Confidence 56999999999999999999999998 6678898888765 348999999999887 78999999876655
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
++.+......+|.++.++|||||+|++..+.
T Consensus 162 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 162 NELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp TTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 6676556789999999999999999986543
No 30
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=7.5e-15 Score=140.46 Aligned_cols=124 Identities=17% Similarity=0.221 Sum_probs=101.5
Q ss_pred CccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 276 TIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
...+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++..+.++++|++.+++++++||+|++..+++| +++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~- 109 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQGLFVYAV--EPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHH-FSH- 109 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTTCEEEEE--CSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGG-CSS-
T ss_pred CCCEEEEEcCcccHHHHHHHhCCCEEEEE--eCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhh-ccC-
Confidence 34567999999999999999999999998 77888888887777789999999999999999999999999966 455
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccCcC--------------------cHHHHHHHHHHcCCEEEEEEe
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ--------------------LNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~--------------------~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
...++.++.|+|| ||++++.++...... ..+.+. +++++||..+....
T Consensus 110 -~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 110 -LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIP 177 (261)
T ss_dssp -HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEE
T ss_pred -HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEE
Confidence 7899999999999 998887665421100 123466 99999998776554
No 31
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.59 E-value=2.1e-14 Score=134.28 Aligned_cols=126 Identities=19% Similarity=0.189 Sum_probs=103.4
Q ss_pred ccEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhcC---CeeEEEcccccCCCCCCceeEEEEccchhhcC
Q 043503 277 IRIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASRG---LISMHISVSQRLPFFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~rg---~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~ 352 (430)
..+|||+|||+|.++..+++++. +|+++ |+++.+++.++++. .+.++.+|+..+++++++||+|++..++++ .
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~ 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGL--DLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHY-V 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGG-C
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEE--cCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccc-c
Confidence 34579999999999999999988 89988 66789999998774 378999999988888899999999999865 5
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEeecccc---------------------Cc--------------------CcHHHHH
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDRFFCF---------------------GS--------------------QLNETYV 391 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~---------------------~~--------------------~~~~~~~ 391 (430)
++ ...++.++.++|+|||++++..+... .. ...+++.
T Consensus 121 ~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 198 (243)
T 3bkw_A 121 ED--VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTL 198 (243)
T ss_dssp SC--HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHH
T ss_pred ch--HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHH
Confidence 55 78999999999999999998652110 00 0246789
Q ss_pred HHHHHcCCEEEEEEec
Q 043503 392 PMLDRIGFKKLRWNVG 407 (430)
Q Consensus 392 ~ll~~~Gfk~l~~~~~ 407 (430)
.+++++||+++.+...
T Consensus 199 ~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 199 NALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHTTCEEEEEEEC
T ss_pred HHHHHcCCEeeeeccC
Confidence 9999999999987644
No 32
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.59 E-value=2.9e-14 Score=134.85 Aligned_cols=135 Identities=20% Similarity=0.234 Sum_probs=104.8
Q ss_pred HHHHHccCC-CCCccEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc----CC---eeEEEcccccCCCC
Q 043503 265 IDQVLSMKP-LGTIRIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRLPFF 335 (430)
Q Consensus 265 id~lL~~~p-~~~ir~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~lpf~ 335 (430)
+..++..++ .....+|||+|||+|.++..+++.+ .+|+++ |+++.+++.++++ |. +.++++|+..+|++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGI--DLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ 111 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEE--ECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC
Confidence 444554432 2223467999999999999999984 499988 6678888877654 32 88999999999999
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC-----------------cHHHHHHHHHHcC
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ-----------------LNETYVPMLDRIG 398 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~-----------------~~~~~~~ll~~~G 398 (430)
+++||+|++..++++. + ...++.++.|+|||||++++.+....... ..+.+..+++++|
T Consensus 112 ~~~fD~v~~~~~l~~~--~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 187 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNI--G--FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAG 187 (257)
T ss_dssp TTCEEEEEEESCSCCC--C--HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTT
T ss_pred CCCEEEEEecChHhhc--C--HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCC
Confidence 9999999999999664 3 67899999999999999999874321111 2356788999999
Q ss_pred CEEEEEE
Q 043503 399 FKKLRWN 405 (430)
Q Consensus 399 fk~l~~~ 405 (430)
|+.+...
T Consensus 188 f~~v~~~ 194 (257)
T 3f4k_A 188 YTPTAHF 194 (257)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 9988755
No 33
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=1.8e-14 Score=138.80 Aligned_cols=123 Identities=20% Similarity=0.296 Sum_probs=100.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-CCeeEEEcccccCCCCCCceeEEEEccchhhcCCchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-GLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSM 356 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~ 356 (430)
.+|||||||+|.++..+++.+.+|+++ |+++.|++.++++ ..+.+.++|++.+++ +++||+|++..+++ |+++
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~-~~~d-- 132 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSGAEVLGT--DNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLH-WVKE-- 132 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGG-GCSC--
T ss_pred CEEEEecCCCCHHHHHHHhCCCeEEEE--ECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhh-hCcC--
Confidence 456999999999999999988999998 7789999998877 357899999999887 67999999999994 5666
Q ss_pred HHHHHHHHHHhccCCcEEEEeeccccC---------------------------cCcHHHHHHHHHHcCCEEEEEEe
Q 043503 357 LEFTLYDIYRLLRPGGIFWLDRFFCFG---------------------------SQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 357 l~~~L~ei~RvLrPGG~lvl~~f~~~~---------------------------~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
...++.++.|+|||||++++..+.... ....+.+..+++++||+.+....
T Consensus 133 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 209 (279)
T 3ccf_A 133 PEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAAL 209 (279)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEEE
Confidence 789999999999999999986543211 00235678899999999887653
No 34
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.58 E-value=1.8e-14 Score=137.26 Aligned_cols=98 Identities=15% Similarity=0.196 Sum_probs=83.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC-CeeEEEcccccCCCCCCceeEEEEcc-chhhcCCch
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG-LISMHISVSQRLPFFENTLDIVHSMH-VLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg-~i~~~~~d~~~lpf~d~sfDlV~~~~-~L~~~~~d~ 355 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.+++.++++. .+.++++|+..+++ +++||+|+|.. +++++....
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~ 128 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFGTVEGL--ELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQA 128 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSSEEEEE--ESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHH
T ss_pred CcEEEeCCcCCHHHHHHHHcCCeEEEE--ECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHH
Confidence 457999999999999999999999998 67799999998873 48899999999887 78999999997 886543324
Q ss_pred hHHHHHHHHHHhccCCcEEEEee
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
....++.++.++|||||+|+++.
T Consensus 129 ~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 129 ELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEe
Confidence 57889999999999999999963
No 35
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=3.5e-14 Score=134.25 Aligned_cols=135 Identities=19% Similarity=0.243 Sum_probs=105.2
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc-CCeeEEEcccccCCCCCCceeE
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR-GLISMHISVSQRLPFFENTLDI 341 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf~d~sfDl 341 (430)
...++..++.....+|||+|||+|.++..++++ +.+|+++ |+++.|++.++++ ..+.++.+|++.++ ++++||+
T Consensus 22 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~--D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 22 ARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGI--DSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp HHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEE--ESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEE
T ss_pred HHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCE
Confidence 345555444333455799999999999999998 8899998 6779999998877 34889999999988 7889999
Q ss_pred EEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC-----------------------------cCcHHHHHH
Q 043503 342 VHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG-----------------------------SQLNETYVP 392 (430)
Q Consensus 342 V~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~-----------------------------~~~~~~~~~ 392 (430)
|++..+++ |.++ ...++.++.++|+|||++++..+.... ....+.+..
T Consensus 99 v~~~~~l~-~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (259)
T 2p35_A 99 LYANAVFQ-WVPD--HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFN 175 (259)
T ss_dssp EEEESCGG-GSTT--HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHH
T ss_pred EEEeCchh-hCCC--HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHH
Confidence 99999994 5666 789999999999999999987532110 012356888
Q ss_pred HHHHcCCEEEEEE
Q 043503 393 MLDRIGFKKLRWN 405 (430)
Q Consensus 393 ll~~~Gfk~l~~~ 405 (430)
+++++||++..+.
T Consensus 176 ~l~~aGf~v~~~~ 188 (259)
T 2p35_A 176 ALSPKSSRVDVWH 188 (259)
T ss_dssp HHGGGEEEEEEEE
T ss_pred HHHhcCCceEEEE
Confidence 9999999755443
No 36
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.58 E-value=7.6e-15 Score=134.40 Aligned_cols=147 Identities=16% Similarity=0.169 Sum_probs=108.5
Q ss_pred cEEEEEcCCccHH-HHHHHHcCCEEEEEecCCChhHHHHHHhc-----CCeeEEEcccccCCCCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGTGTF-AARMRERNVTIITTSLNLDGPFNSFIASR-----GLISMHISVSQRLPFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~-a~~La~~g~~Vv~vdiD~s~~~le~a~~r-----g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~ 351 (430)
.+|||+|||+|.+ ...++..+.+|+++ |+++.+++.++++ ..+.++.+|+..+++++++||+|++..+++|
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~- 101 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGYKTYGI--EISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH- 101 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTCEEEEE--ECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG-
T ss_pred CEEEEECCCCCHHHHHHHHhCCCEEEEE--ECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh-
Confidence 4569999999997 45556668899998 6778888877654 3478899999999988999999999988866
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeeccccCc------------------------C--cHHHHHHHHHHcCCEEEEEE
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS------------------------Q--LNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~------------------------~--~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.+......++.++.++|+|||++++..+..... . ..+++..++...||......
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeeee
Confidence 444458899999999999999999877543211 0 12457888888888776655
Q ss_pred ecccccCCCchhHHHhHhhccC
Q 043503 406 VGMKLDRGVKKNEWYFSAVLEK 427 (430)
Q Consensus 406 ~~~k~~~g~~~~~~~lsa~leK 427 (430)
.......|......|....++|
T Consensus 182 ~~~~~~~g~~~~~~f~~~~~~~ 203 (209)
T 2p8j_A 182 VVERINDGLKIKQGYVDYIAEK 203 (209)
T ss_dssp EEEEEETTEEEEEEEEEEEEEC
T ss_pred eeehhhcCCcccceeeeeehhh
Confidence 4444344444455555555555
No 37
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.57 E-value=2.5e-14 Score=134.73 Aligned_cols=128 Identities=16% Similarity=0.138 Sum_probs=103.9
Q ss_pred ccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcC------CeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 277 IRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRG------LISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg------~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
..+|||+|||+|.++..++++ +.+|+++ |+++.+++.++++. .+.++.+|+..+++++++||+|++..+++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMV--DITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEE--ESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEE--eCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 356799999999999999988 4588888 77789998887652 27789999999988888999999999996
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeeccccC--------c---CcHHHHHHHHHHcCCEEEEEEec
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG--------S---QLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~--------~---~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
+ .++.....++.++.++|+|||++++.++.... . ...+.+.++++++||+++.....
T Consensus 158 ~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 158 H-LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp G-SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred h-CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 5 55544678999999999999999997654321 0 13578999999999999987643
No 38
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.57 E-value=2.2e-14 Score=137.94 Aligned_cols=125 Identities=13% Similarity=-0.013 Sum_probs=99.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-----------------------CCeeEEEcccccCCC
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-----------------------GLISMHISVSQRLPF 334 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-----------------------g~i~~~~~d~~~lpf 334 (430)
.+|||+|||+|..+..|+++|.+|+|+ |+|+.|++.|+++ ..+.++++|+..+++
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~~V~gv--D~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGHTVVGV--EISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTCEEEEE--CSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCCeEEEE--ECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 356999999999999999999999998 8889999988643 237899999999987
Q ss_pred CC-CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc-----Cc---CcHHHHHHHHHHcCCEEEEEE
Q 043503 335 FE-NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF-----GS---QLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 335 ~d-~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~-----~~---~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.+ ++||+|++..++.+ ++......++.++.|+|||||+|++..+... ++ -..+++..++.. +|+++.+.
T Consensus 148 ~~~~~FD~V~~~~~l~~-l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVA-INPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp GCCCCEEEEEESSSTTT-SCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhh-CCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 64 89999999888855 5655678899999999999999975443211 11 123678888877 59988766
Q ss_pred e
Q 043503 406 V 406 (430)
Q Consensus 406 ~ 406 (430)
.
T Consensus 226 ~ 226 (252)
T 2gb4_A 226 E 226 (252)
T ss_dssp E
T ss_pred c
Confidence 3
No 39
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.57 E-value=4.5e-14 Score=133.55 Aligned_cols=123 Identities=20% Similarity=0.297 Sum_probs=99.2
Q ss_pred ccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-----CCeeEEEcccccCCCCCCceeEEEEccchhhc
Q 043503 277 IRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-----GLISMHISVSQRLPFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-----g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~ 351 (430)
..+|||+|||+|.++..+++++.+|+++ |+++.+++.++++ ..+.++.+|++.+++++++||+|++..+++ +
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~ 116 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGYRYIAL--DADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH-L 116 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTCEEEEE--ESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG-G
T ss_pred CCEEEEeCCcCCHHHHHHHHCCCEEEEE--ECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh-h
Confidence 3467999999999999999999999998 6778999988876 348999999999999899999999999994 5
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeeccccC-cC--------------------------cHHHHHHHHHHcCCEEEEE
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG-SQ--------------------------LNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~-~~--------------------------~~~~~~~ll~~~Gfk~l~~ 404 (430)
.++ ...++.++.|+|||||++++. +...+ .. ..+.+..+++++||+.+.+
T Consensus 117 ~~~--~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 117 VPD--WPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp CTT--HHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred cCC--HHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 665 788999999999999999886 22110 00 1234667888999986655
Q ss_pred E
Q 043503 405 N 405 (430)
Q Consensus 405 ~ 405 (430)
.
T Consensus 194 ~ 194 (263)
T 2yqz_A 194 E 194 (263)
T ss_dssp E
T ss_pred E
Confidence 4
No 40
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.56 E-value=2.8e-14 Score=144.74 Aligned_cols=124 Identities=19% Similarity=0.231 Sum_probs=102.5
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc---------C-----CeeEEEcccccC------CC
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR---------G-----LISMHISVSQRL------PF 334 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r---------g-----~i~~~~~d~~~l------pf 334 (430)
.+|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++++|+..+ ++
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHGKVIGV--DMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTCEEEEE--ECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 45799999999999999886 5689988 7788999888876 3 589999999887 88
Q ss_pred CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc-------------------CcHHHHHHHHH
Q 043503 335 FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-------------------QLNETYVPMLD 395 (430)
Q Consensus 335 ~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-------------------~~~~~~~~ll~ 395 (430)
++++||+|+++.++++ .++ ...++.++.|+|||||+|++.++..... ...+.+..+++
T Consensus 163 ~~~~fD~V~~~~~l~~-~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 239 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNL-STN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVA 239 (383)
T ss_dssp CTTCEEEEEEESCGGG-CSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHH
T ss_pred CCCCEEEEEEccchhc-CCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHH
Confidence 8999999999999854 666 7899999999999999999987654322 12367899999
Q ss_pred HcCCEEEEEEe
Q 043503 396 RIGFKKLRWNV 406 (430)
Q Consensus 396 ~~Gfk~l~~~~ 406 (430)
++||+.++...
T Consensus 240 ~aGF~~v~~~~ 250 (383)
T 4fsd_A 240 EAGFRDVRLVS 250 (383)
T ss_dssp HTTCCCEEEEE
T ss_pred HCCCceEEEEe
Confidence 99998775543
No 41
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.56 E-value=5.8e-14 Score=134.51 Aligned_cols=124 Identities=19% Similarity=0.261 Sum_probs=100.0
Q ss_pred ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccch
Q 043503 277 IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L 348 (430)
..+|||||||+|.++..++++ +.+|+++ |+++.+++.++++ + .+.++.+|...+++++++||+|++..++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSI--DISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEE--ESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 346799999999999999998 6899988 6678888877665 3 3889999999999999999999999999
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeecccc-----Cc----------------------CcHHHHHHHHHHcCCEE
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF-----GS----------------------QLNETYVPMLDRIGFKK 401 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~-----~~----------------------~~~~~~~~ll~~~Gfk~ 401 (430)
.+ +++ ...++.++.++|||||++++.+.... .. ...+.+..+++++||+.
T Consensus 116 ~~-~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 192 (276)
T 3mgg_A 116 EH-LQS--PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEK 192 (276)
T ss_dssp GG-CSC--HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEE
T ss_pred hh-cCC--HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCe
Confidence 65 666 67899999999999999998653210 00 11245778999999998
Q ss_pred EEEE
Q 043503 402 LRWN 405 (430)
Q Consensus 402 l~~~ 405 (430)
+...
T Consensus 193 v~~~ 196 (276)
T 3mgg_A 193 IRVE 196 (276)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8766
No 42
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.56 E-value=3.8e-14 Score=131.25 Aligned_cols=129 Identities=12% Similarity=0.143 Sum_probs=100.0
Q ss_pred cEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----C-------CeeEEEcccccCCCCCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----G-------LISMHISVSQRLPFFENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g-------~i~~~~~d~~~lpf~d~sfDlV~~ 344 (430)
.+|||+|||+|.++..+++++ .+|+++ |+++.+++.++++ + .+.++.+|+...++++++||+|+|
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKSFEQITGV--DVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTTCCEEEEE--ESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred CEEEEecCCCCHHHHHHHhcCCCCEEEEE--ECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEE
Confidence 456999999999999999985 689988 6678888888765 1 589999999888888899999999
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC------------------cHHHHH----HHHHHcCCEEE
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ------------------LNETYV----PMLDRIGFKKL 402 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~------------------~~~~~~----~ll~~~Gfk~l 402 (430)
..++++ .++.....++.++.++|||||.++.......+.. ..+++. .++++.||++.
T Consensus 109 ~~~l~~-~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~ 187 (219)
T 3jwg_A 109 IEVIEH-LDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVR 187 (219)
T ss_dssp ESCGGG-CCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEE
T ss_pred HHHHHh-CCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEE
Confidence 999966 5654568999999999999997776543321000 123444 78899999887
Q ss_pred EEEeccc
Q 043503 403 RWNVGMK 409 (430)
Q Consensus 403 ~~~~~~k 409 (430)
-..++..
T Consensus 188 ~~~~g~~ 194 (219)
T 3jwg_A 188 FLQIGEI 194 (219)
T ss_dssp EEEESCC
T ss_pred EEecCCc
Confidence 7655554
No 43
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.55 E-value=1.2e-13 Score=134.60 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=106.1
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
++.++..+......+|||||||+|.++..++++ +.+|+++ |+++.+++.++++ | .+.++.+|...+ +
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~ 135 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGL--TLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---D 135 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEE--ECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---C
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEE--ECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---C
Confidence 444555444344456799999999999999998 9999988 6778888887765 3 488999998776 7
Q ss_pred CceeEEEEccchhhcCC------chhHHHHHHHHHHhccCCcEEEEeeccccCc--------------------------
Q 043503 337 NTLDIVHSMHVLSNWIP------DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-------------------------- 384 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~------d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-------------------------- 384 (430)
++||+|++..+++|+.+ ......++.++.|+|||||++++..+.....
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIF 215 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTC
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcC
Confidence 89999999999976422 1356899999999999999999977653221
Q ss_pred -----CcHHHHHHHHHHcCCEEEEEEe
Q 043503 385 -----QLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 385 -----~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
...+.+..+++++||+++....
T Consensus 216 p~~~~~s~~~~~~~l~~aGf~~~~~~~ 242 (302)
T 3hem_A 216 PGGRLPRISQVDYYSSNAGWKVERYHR 242 (302)
T ss_dssp TTCCCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHhCCcEEEEEEe
Confidence 1134688899999999988753
No 44
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.55 E-value=1.2e-14 Score=129.15 Aligned_cols=119 Identities=11% Similarity=0.149 Sum_probs=97.4
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-CCeeEEEcccccCCCCCCceeEEEEccchhhcCCchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-GLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSM 356 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~ 356 (430)
.+|||+|||+|.++..+++++.+++++ |+++.+++.++++ ..+.+..+| +++++++||+|++..++++ .++
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~-~~~-- 90 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFATKLYCI--DINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHD-MDD-- 90 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTEEEEEEE--CSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTT-CSC--
T ss_pred CeEEEECCCCCHHHHHHHhhcCeEEEE--eCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhc-ccC--
Confidence 456999999999999999986688888 7778999988876 447888888 6778899999999999965 455
Q ss_pred HHHHHHHHHHhccCCcEEEEeeccccCcC---------cHHHHHHHHHHcCCEEEEEEe
Q 043503 357 LEFTLYDIYRLLRPGGIFWLDRFFCFGSQ---------LNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 357 l~~~L~ei~RvLrPGG~lvl~~f~~~~~~---------~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
...++.++.|+|||||++++.++...... ..+.+..+++ ||+.++...
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccC
Confidence 78999999999999999999877643321 2356788887 999887653
No 45
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.54 E-value=8.1e-14 Score=126.11 Aligned_cols=124 Identities=13% Similarity=0.167 Sum_probs=98.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~ 351 (430)
.+|||+|||+|.++..+++++.+++++ |+++.+++.++++ + .+.++.+|+..+++ +++||+|++..++++
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~- 109 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGYDVDAW--DKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF- 109 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG-
T ss_pred CeEEEEcCCCCHHHHHHHHCCCeEEEE--ECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh-
Confidence 456999999999999999999999998 6678888777653 3 48899999998887 889999999999965
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeeccccCc----------CcHHHHHHHHHHcCCEEEEEEec
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS----------QLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~----------~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
.+......++.++.++|+|||++++..++.... -..+++.++++. |+++.+...
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 554458899999999999999988766543211 023567777776 998876543
No 46
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.54 E-value=4.2e-14 Score=130.95 Aligned_cols=129 Identities=11% Similarity=0.107 Sum_probs=99.5
Q ss_pred cEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----C-------CeeEEEcccccCCCCCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----G-------LISMHISVSQRLPFFENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g-------~i~~~~~d~~~lpf~d~sfDlV~~ 344 (430)
.+|||+|||+|.++..+++++ .+|+++ |+++.+++.++++ + .+.++.+|+...+.++++||+|++
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFEQITGV--DVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCSEEEEE--ESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCCEEEEE--ECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 456999999999999999985 689988 6678888888765 1 588999998877777789999999
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc--------------CcC----cHHHHH----HHHHHcCCEEE
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF--------------GSQ----LNETYV----PMLDRIGFKKL 402 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~--------------~~~----~~~~~~----~ll~~~Gfk~l 402 (430)
..++++ +++.....++.++.++|||||.+++...... ... ..+++. .++++.||++.
T Consensus 109 ~~~l~~-~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 109 IEVIEH-LDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQ 187 (217)
T ss_dssp ESCGGG-CCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEE
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEE
Confidence 999966 5654568999999999999998877643211 000 223444 88999999987
Q ss_pred EEEeccc
Q 043503 403 RWNVGMK 409 (430)
Q Consensus 403 ~~~~~~k 409 (430)
...++..
T Consensus 188 ~~~~g~~ 194 (217)
T 3jwh_A 188 FQPIGEA 194 (217)
T ss_dssp ECCCSCC
T ss_pred EEecCCc
Confidence 6554443
No 47
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=6.3e-14 Score=125.79 Aligned_cols=126 Identities=16% Similarity=0.132 Sum_probs=103.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC-CeeEEEcccccCCCCCCceeEEEEc-cchhhcCCch
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG-LISMHISVSQRLPFFENTLDIVHSM-HVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg-~i~~~~~d~~~lpf~d~sfDlV~~~-~~L~~~~~d~ 355 (430)
.+|||+|||+|.++..+++.+.+++++ |+++.+++.++++. .+.++.+|+..+++++++||+|++. .++++ .+..
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~--D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~-~~~~ 124 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGHDVLGT--DLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGF-LAED 124 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGG-SCHH
T ss_pred CeEEEECCCCCHHHHHHHHCCCcEEEE--cCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhh-cChH
Confidence 456999999999999999999999988 66788888888773 3789999998888888999999998 56644 5544
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEec
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
....++.++.++|+|||.+++...... ....+.+..++++.||+++.....
T Consensus 125 ~~~~~l~~~~~~l~~~G~l~~~~~~~~-~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 125 GREPALANIHRALGADGRAVIGFGAGR-GWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEETTS-SCCHHHHHHHHHHHTEEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCCC-CcCHHHHHHHHHHcCCEEeeeecc
Confidence 578999999999999999998754322 224577899999999999876543
No 48
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.54 E-value=5.6e-14 Score=136.14 Aligned_cols=124 Identities=13% Similarity=0.092 Sum_probs=98.1
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C-CeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G-LISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||||||+|.++..+++. +.+|+++ |+++.+++.++++ + .+.++++|+..+++ +++||+|++..+++
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLPEGSKYTGI--DSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAICHAFLL 100 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSCTTCEEEEE--ESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEEESCGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCCeeEEEECChhh
Confidence 45699999999999999988 5899998 6678888877765 3 38899999999887 46999999999986
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeecc---------ccCcC--------------------------cHHHHHHHH
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF---------CFGSQ--------------------------LNETYVPML 394 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~---------~~~~~--------------------------~~~~~~~ll 394 (430)
+ .++ ...++.++.|+|||||++++.++. +.+.. ..+.+..++
T Consensus 101 ~-~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 177 (284)
T 3gu3_A 101 H-MTT--PETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYL 177 (284)
T ss_dssp G-CSS--HHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHH
T ss_pred c-CCC--HHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHH
Confidence 5 566 689999999999999999986543 11100 123467889
Q ss_pred HHcCCEEEEEEec
Q 043503 395 DRIGFKKLRWNVG 407 (430)
Q Consensus 395 ~~~Gfk~l~~~~~ 407 (430)
+++||+.+.....
T Consensus 178 ~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 178 SELGVKNIECRVS 190 (284)
T ss_dssp HHTTCEEEEEEEC
T ss_pred HHcCCCeEEEEEc
Confidence 9999998876433
No 49
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.54 E-value=6.9e-14 Score=137.21 Aligned_cols=135 Identities=17% Similarity=0.161 Sum_probs=105.8
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
++.++...+.....+|||||||+|.++..++++ +.+|+++ |+++.+++.++++ | .+.++.+|...++
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGL--TLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEE--ESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEE--ECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---
Confidence 455555544444456799999999999999988 9999998 6778888888765 3 3888999988775
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc-------------------------------C
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-------------------------------Q 385 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-------------------------------~ 385 (430)
++||+|++..+++| +++.....++.++.++|||||.+++..+..... .
T Consensus 154 ~~fD~v~~~~~l~~-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
T 2fk8_A 154 EPVDRIVSIEAFEH-FGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLP 232 (318)
T ss_dssp CCCSEEEEESCGGG-TCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred CCcCEEEEeChHHh-cCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCC
Confidence 78999999999966 543458899999999999999999977654221 0
Q ss_pred cHHHHHHHHHHcCCEEEEEE
Q 043503 386 LNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 386 ~~~~~~~ll~~~Gfk~l~~~ 405 (430)
..+.+..+++++||+++.+.
T Consensus 233 s~~~~~~~l~~aGf~~~~~~ 252 (318)
T 2fk8_A 233 STEMMVEHGEKAGFTVPEPL 252 (318)
T ss_dssp CHHHHHHHHHHTTCBCCCCE
T ss_pred CHHHHHHHHHhCCCEEEEEE
Confidence 23568889999999988754
No 50
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=1.4e-13 Score=127.36 Aligned_cols=110 Identities=15% Similarity=0.227 Sum_probs=87.4
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-----CCeeEEEcccccCCCCCCce
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-----GLISMHISVSQRLPFFENTL 339 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-----g~i~~~~~d~~~lpf~d~sf 339 (430)
++.++..++. ..+|||+|||+|.++..+++++.+++++ |+++.+++.++++ ..+.++.+|+..+++++++|
T Consensus 29 ~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 104 (227)
T 1ve3_A 29 EPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGFEVVGV--DISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTF 104 (227)
T ss_dssp HHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCE
T ss_pred HHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCCEEEEE--ECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcE
Confidence 4444444443 3467999999999999999998899988 6678888877665 44889999999888888999
Q ss_pred eEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 340 DIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 340 DlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
|+|++..++++ ........++.++.++|+|||.+++.++
T Consensus 105 D~v~~~~~~~~-~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 105 DYVIFIDSIVH-FEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp EEEEEESCGGG-CCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcCchHh-CCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 99999988533 3333478899999999999999988654
No 51
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.52 E-value=1.8e-13 Score=126.17 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=103.2
Q ss_pred HHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEccccc--CCCCCCceeEEEEc
Q 043503 268 VLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQR--LPFFENTLDIVHSM 345 (430)
Q Consensus 268 lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~--lpf~d~sfDlV~~~ 345 (430)
++..++ ....+|||+|||+|.++..+++.+.+++++ |+++.+++.++++. ..++.+|+.. .++++++||+|++.
T Consensus 25 l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~--D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 25 LLKHIK-KEWKEVLDIGCSSGALGAAIKENGTRVSGI--EAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp HHTTCC-TTCSEEEEETCTTSHHHHHHHTTTCEEEEE--ESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred HHHHhc-cCCCcEEEeCCCCCHHHHHHHhcCCeEEEE--eCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccCEEEEC
Confidence 334343 233567999999999999999988889988 66788888888765 3788888876 66778999999999
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC--------------------------cCcHHHHHHHHHHcCC
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG--------------------------SQLNETYVPMLDRIGF 399 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~--------------------------~~~~~~~~~ll~~~Gf 399 (430)
.+++| .++ ...++.++.++|+|||++++....... ....+.+..+++++||
T Consensus 101 ~~l~~-~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 177 (230)
T 3cc8_A 101 DVLEH-LFD--PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGY 177 (230)
T ss_dssp SCGGG-SSC--HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTE
T ss_pred Chhhh-cCC--HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCC
Confidence 99966 555 678999999999999999987532100 0124679999999999
Q ss_pred EEEEEEe
Q 043503 400 KKLRWNV 406 (430)
Q Consensus 400 k~l~~~~ 406 (430)
+++....
T Consensus 178 ~~~~~~~ 184 (230)
T 3cc8_A 178 SISKVDR 184 (230)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9887664
No 52
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.52 E-value=6.9e-14 Score=129.01 Aligned_cols=105 Identities=16% Similarity=0.245 Sum_probs=87.0
Q ss_pred CCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCCCceeEEEEccc
Q 043503 272 KPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFENTLDIVHSMHV 347 (430)
Q Consensus 272 ~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d~sfDlV~~~~~ 347 (430)
.+.....+|||+|||+|.++..+++++.+|+++ |+++.+++.++++ +.+.++++|+..++ ++++||+|++..+
T Consensus 47 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 47 LSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVI--DVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEV 123 (216)
T ss_dssp TTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEE--ESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESC
T ss_pred cccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEE--ECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccH
Confidence 333444567999999999999999998889988 6778999888876 34899999999888 6889999999999
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
++|+.+......++.++.++|||||++++..+
T Consensus 124 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 124 LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 96643334457889999999999999999753
No 53
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.51 E-value=9.1e-14 Score=129.74 Aligned_cols=97 Identities=18% Similarity=0.217 Sum_probs=82.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C-CeeEEEcccccCCCCCCceeEEEEcc-chhhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G-LISMHISVSQRLPFFENTLDIVHSMH-VLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~lpf~d~sfDlV~~~~-~L~~~ 351 (430)
.+|||+|||+|.++..+++++.+++++ |+++.+++.++++ + .+.++++|+..++++ ++||+|++.. +++|+
T Consensus 39 ~~vLdiG~G~G~~~~~l~~~~~~~~~~--D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~ 115 (246)
T 1y8c_A 39 DDYLDLACGTGNLTENLCPKFKNTWAV--DLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYI 115 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGGSSEEEEE--CSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGC
T ss_pred CeEEEeCCCCCHHHHHHHHCCCcEEEE--ECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCcccccc
Confidence 457999999999999999999999988 7788888887765 3 478999999988876 8999999998 89664
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
........++.++.++|+|||+++++
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 116 IDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 33345889999999999999999984
No 54
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.51 E-value=1.6e-13 Score=125.27 Aligned_cols=123 Identities=19% Similarity=0.140 Sum_probs=97.7
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C-CeeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G-LISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ + .+.++.+|+..+++++++||+|++.. .++ +
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~-~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAV--DQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHL-P 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEE--CSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCC-C
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEE--ECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcC-C
Confidence 56999999999999999999999988 7778888887765 3 47888999999888889999999953 243 4
Q ss_pred chhHHHHHHHHHHhccCCcEEEEeeccccCc-------------CcHHHHHHHHHHcCCEEEEEEecc
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-------------QLNETYVPMLDRIGFKKLRWNVGM 408 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-------------~~~~~~~~ll~~~Gfk~l~~~~~~ 408 (430)
......++.++.++|+|||++++..+..... -..+++..+++ ||+++......
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~ 172 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNLE 172 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEEE
Confidence 3457899999999999999999987543221 12356778887 99988766443
No 55
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.51 E-value=1.4e-13 Score=128.38 Aligned_cols=99 Identities=17% Similarity=0.195 Sum_probs=82.5
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC-CeeEEEcccccCCCCCCceeEEEEcc-chhhcCCch
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG-LISMHISVSQRLPFFENTLDIVHSMH-VLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg-~i~~~~~d~~~lpf~d~sfDlV~~~~-~L~~~~~d~ 355 (430)
.+|||+|||+|.++..+++++.+++++ |+++.+++.++++. .+.++.+|+..+++ +++||+|+|.. +++|.....
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~~~~v~~~--D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~ 118 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKEFGDTAGL--ELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTE 118 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHHHSEEEEE--ESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHH
T ss_pred CeEEEecccCCHHHHHHHHhCCcEEEE--eCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHH
Confidence 456999999999999999987789988 77799999988773 48899999988887 78999999755 775533334
Q ss_pred hHHHHHHHHHHhccCCcEEEEeec
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
....++.++.++|+|||+++++.+
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 119 ELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHhcCCCeEEEEEec
Confidence 578999999999999999999753
No 56
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.51 E-value=1.5e-13 Score=133.74 Aligned_cols=126 Identities=18% Similarity=0.191 Sum_probs=90.6
Q ss_pred ccEEEEEcCCccHHHHH----HHHc--CCEE--EEEecCCChhHHHHHHhc-----C--CeeE--EEcccccCC------
Q 043503 277 IRIGLDIGGGTGTFAAR----MRER--NVTI--ITTSLNLDGPFNSFIASR-----G--LISM--HISVSQRLP------ 333 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~----La~~--g~~V--v~vdiD~s~~~le~a~~r-----g--~i~~--~~~d~~~lp------ 333 (430)
..+|||||||+|.++.. ++.+ ++.| +++ |+|+.|++.++++ + .+.+ ..++.+.++
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~v--D~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVV--EPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEE--CSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEE--eCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 34679999999976653 3333 4544 665 8899999888765 2 2333 445555543
Q ss_pred CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC--------------------cCcHHHHHHH
Q 043503 334 FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG--------------------SQLNETYVPM 393 (430)
Q Consensus 334 f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~--------------------~~~~~~~~~l 393 (430)
+++++||+|++..+++ |+++ +..+|.++.|+|||||++++..+.... ....+++..+
T Consensus 131 ~~~~~fD~V~~~~~l~-~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (292)
T 2aot_A 131 KELQKWDFIHMIQMLY-YVKD--IPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQM 207 (292)
T ss_dssp TCCCCEEEEEEESCGG-GCSC--HHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHH
T ss_pred cCCCceeEEEEeeeee-ecCC--HHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHH
Confidence 5689999999999995 5777 789999999999999999986432110 0123578899
Q ss_pred HHHcCCEEEEEEec
Q 043503 394 LDRIGFKKLRWNVG 407 (430)
Q Consensus 394 l~~~Gfk~l~~~~~ 407 (430)
++++||+.......
T Consensus 208 l~~aGf~~~~~~~~ 221 (292)
T 2aot_A 208 LDNLGLKYECYDLL 221 (292)
T ss_dssp HHHHTCCEEEEEEC
T ss_pred HHHCCCceEEEEec
Confidence 99999998875544
No 57
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.50 E-value=4e-14 Score=135.94 Aligned_cols=129 Identities=12% Similarity=0.090 Sum_probs=96.5
Q ss_pred ccEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc-----------------------------------C
Q 043503 277 IRIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR-----------------------------------G 320 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r-----------------------------------g 320 (430)
..+|||||||+|.++..++..++ +|+++ |+|+.|++.|+++ .
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~~~~v~g~--D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDSFQDITLS--DFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGTEEEEEEE--ESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHhhhcceeec--cccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 35679999999998888777776 58888 7789988877642 0
Q ss_pred Cee-EEEccccc-CCC---CCCceeEEEEccchhhcCCc-hhHHHHHHHHHHhccCCcEEEEeeccccC-----c-----
Q 043503 321 LIS-MHISVSQR-LPF---FENTLDIVHSMHVLSNWIPD-SMLEFTLYDIYRLLRPGGIFWLDRFFCFG-----S----- 384 (430)
Q Consensus 321 ~i~-~~~~d~~~-lpf---~d~sfDlV~~~~~L~~~~~d-~~l~~~L~ei~RvLrPGG~lvl~~f~~~~-----~----- 384 (430)
.+. ++++|... .|+ .+++||+|+++.++++..++ .....++.++.|+|||||+|+++...... .
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~ 213 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSC 213 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeec
Confidence 122 77888766 343 36799999999999764333 34678999999999999999998644221 0
Q ss_pred --CcHHHHHHHHHHcCCEEEEEEec
Q 043503 385 --QLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 385 --~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
-..+++..+++++||+++.+...
T Consensus 214 ~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 214 VALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEeec
Confidence 12467899999999999887643
No 58
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.50 E-value=5.4e-14 Score=137.67 Aligned_cols=126 Identities=15% Similarity=0.113 Sum_probs=99.3
Q ss_pred cEEEEEcCCccHHHHHHHH--c-CCEEEEEecCCChhHHHHHHhc----CC---eeEEEcccccCCCCCCceeEEEEccc
Q 043503 278 RIGLDIGGGTGTFAARMRE--R-NVTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRLPFFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~--~-g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~lpf~d~sfDlV~~~~~ 347 (430)
.+|||||||+|.++..++. . +.+|+++ |+++.+++.++++ |. +.++++|+..++++ ++||+|++..+
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGI--DYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEE--ESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEE--ECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECCh
Confidence 4569999999999999952 2 6799988 6678888888765 22 88999999999987 99999999998
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC--------------c---------------------CcHHHHHH
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG--------------S---------------------QLNETYVP 392 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~--------------~---------------------~~~~~~~~ 392 (430)
++|+.+......++.++.++|||||++++.++.... . ...+.+.+
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRA 276 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHH
Confidence 866434433445899999999999999997744210 0 12467889
Q ss_pred HHHHcCCEEEEEEe
Q 043503 393 MLDRIGFKKLRWNV 406 (430)
Q Consensus 393 ll~~~Gfk~l~~~~ 406 (430)
+++++||+.++...
T Consensus 277 ~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 277 QLEEAGFTDLRFED 290 (305)
T ss_dssp HHHHTTCEEEEEEC
T ss_pred HHHHCCCEEEEEEc
Confidence 99999999988764
No 59
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.50 E-value=1.1e-13 Score=134.18 Aligned_cols=128 Identities=23% Similarity=0.194 Sum_probs=93.5
Q ss_pred cEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc---------------------C---------------
Q 043503 278 RIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR---------------------G--------------- 320 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r---------------------g--------------- 320 (430)
.+|||||||+|.++..++.. +.+|+++ |+++.|++.|+++ |
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACSHFEDITMT--DFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGGGCSEEEEE--CSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CeEEEECCCcChHHHHhhccCCCeEEEe--CCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 46799999999965544443 7799988 7789999877652 1
Q ss_pred CeeEEEccccc-CCC-----CCCceeEEEEccchhhcCCc-hhHHHHHHHHHHhccCCcEEEEeecccc-----C-----
Q 043503 321 LISMHISVSQR-LPF-----FENTLDIVHSMHVLSNWIPD-SMLEFTLYDIYRLLRPGGIFWLDRFFCF-----G----- 383 (430)
Q Consensus 321 ~i~~~~~d~~~-lpf-----~d~sfDlV~~~~~L~~~~~d-~~l~~~L~ei~RvLrPGG~lvl~~f~~~-----~----- 383 (430)
.+.++.+|+.. +|+ ++++||+|+++.++++..++ .....+|.++.|+|||||+|++...... +
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 13456668776 653 45679999999999653322 2478999999999999999998643321 0
Q ss_pred --cCcHHHHHHHHHHcCCEEEEEEec
Q 043503 384 --SQLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 384 --~~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
.-..+.+..+++++||+++.+...
T Consensus 231 ~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred eccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 013467999999999999887643
No 60
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.49 E-value=2.8e-13 Score=125.90 Aligned_cols=119 Identities=20% Similarity=0.340 Sum_probs=97.9
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhHH
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLE 358 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~ 358 (430)
+|||+|||+|.++..++++ +++ |+++.+++.++++ .+.++.+|+..+++++++||+|++..++++ .++ ..
T Consensus 50 ~vLDiG~G~G~~~~~l~~~----~~v--D~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~--~~ 119 (219)
T 1vlm_A 50 RGVEIGVGTGRFAVPLKIK----IGV--EPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICF-VDD--PE 119 (219)
T ss_dssp CEEEETCTTSTTHHHHTCC----EEE--ESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGG-SSC--HH
T ss_pred cEEEeCCCCCHHHHHHHHH----hcc--CCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhh-ccC--HH
Confidence 4599999999999999876 555 7789999999888 568889999999988899999999999965 555 78
Q ss_pred HHHHHHHHhccCCcEEEEeeccccCc--------------------CcHHHHHHHHHHcCCEEEEEEec
Q 043503 359 FTLYDIYRLLRPGGIFWLDRFFCFGS--------------------QLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 359 ~~L~ei~RvLrPGG~lvl~~f~~~~~--------------------~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
.++.++.++|+|||++++..+..... -..+.+..+++++||++++....
T Consensus 120 ~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 120 RALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 89999999999999999975432110 13467899999999998876643
No 61
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.49 E-value=5.1e-14 Score=143.62 Aligned_cols=137 Identities=17% Similarity=0.269 Sum_probs=105.4
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCee----EEEcccccCCCCCCcee
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLIS----MHISVSQRLPFFENTLD 340 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~----~~~~d~~~lpf~d~sfD 340 (430)
.+.++.........+|||||||+|.++..+++++.+|+++ |+++.+++.+++++.-. +...+.+.+++++++||
T Consensus 96 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gv--D~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD 173 (416)
T 4e2x_A 96 ARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGF--EPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPAN 173 (416)
T ss_dssp HHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEE--CCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEE
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEE--CCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEE
Confidence 4455555443444567999999999999999999999988 78899999999886521 22345566777789999
Q ss_pred EEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc------------cCcC----cHHHHHHHHHHcCCEEEEE
Q 043503 341 IVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC------------FGSQ----LNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 341 lV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~------------~~~~----~~~~~~~ll~~~Gfk~l~~ 404 (430)
+|++.++++| +++ ...++.++.|+|||||++++..... ..+. ..+.+..+++++||+++..
T Consensus 174 ~I~~~~vl~h-~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 174 VIYAANTLCH-IPY--VQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp EEEEESCGGG-CTT--HHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred EEEECChHHh-cCC--HHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 9999999966 555 8899999999999999999864321 0011 2367999999999998876
Q ss_pred Ee
Q 043503 405 NV 406 (430)
Q Consensus 405 ~~ 406 (430)
..
T Consensus 251 ~~ 252 (416)
T 4e2x_A 251 QR 252 (416)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 62
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.48 E-value=8.4e-14 Score=135.96 Aligned_cols=126 Identities=19% Similarity=0.211 Sum_probs=95.2
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc------------------------------------
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR------------------------------------ 319 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r------------------------------------ 319 (430)
.+|||||||+|.++..++++ +.+|+++ |+++.+++.|+++
T Consensus 48 ~~VLDiGCG~G~~~~~la~~~~~~~v~gv--Dis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 48 RDVLDLGCNVGHLTLSIACKWGPSRMVGL--DIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp SEEEEESCTTCHHHHHHHHHTCCSEEEEE--ESCHHHHHHHHHTC-----------------------------------
T ss_pred CcEEEeCCCCCHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 46799999999999999998 6899998 6678888888765
Q ss_pred ----------------------------CCeeEEEcccccCC-----CCCCceeEEEEccchhhcC---CchhHHHHHHH
Q 043503 320 ----------------------------GLISMHISVSQRLP-----FFENTLDIVHSMHVLSNWI---PDSMLEFTLYD 363 (430)
Q Consensus 320 ----------------------------g~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L~~~~---~d~~l~~~L~e 363 (430)
..+.+.++|+...+ +.+++||+|+|..++.+.. .+..+..++.+
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 35788888876543 5688999999998884321 34458899999
Q ss_pred HHHhccCCcEEEEeeccc----cCcC--------------cHHHHHHHHHH--cCCEEEEEE
Q 043503 364 IYRLLRPGGIFWLDRFFC----FGSQ--------------LNETYVPMLDR--IGFKKLRWN 405 (430)
Q Consensus 364 i~RvLrPGG~lvl~~f~~----~~~~--------------~~~~~~~ll~~--~Gfk~l~~~ 405 (430)
+.++|+|||+|++...-. .... ..+.+..++.+ +||+.++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 999999999999853210 0000 12456778888 999887754
No 63
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.48 E-value=3.1e-13 Score=127.93 Aligned_cols=131 Identities=17% Similarity=0.137 Sum_probs=100.5
Q ss_pred CccEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C------------------------------
Q 043503 276 TIRIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G------------------------------ 320 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g------------------------------ 320 (430)
...+|||+|||+|.++..++..+. +|+++ |+++.+++.++++ +
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVS--DYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEE--ESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEe--cCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 345679999999999999998887 88888 7788888887654 1
Q ss_pred -Ce-eEEEcccccCC-CCC---CceeEEEEccchhhcCCc-hhHHHHHHHHHHhccCCcEEEEeeccccC----------
Q 043503 321 -LI-SMHISVSQRLP-FFE---NTLDIVHSMHVLSNWIPD-SMLEFTLYDIYRLLRPGGIFWLDRFFCFG---------- 383 (430)
Q Consensus 321 -~i-~~~~~d~~~lp-f~d---~sfDlV~~~~~L~~~~~d-~~l~~~L~ei~RvLrPGG~lvl~~f~~~~---------- 383 (430)
.+ .++.+|+...+ +++ ++||+|++..++++..+. .....++.++.|+|||||+|++.......
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 213 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFS 213 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccc
Confidence 15 78888887754 355 899999999999643322 24788999999999999999987643210
Q ss_pred --cCcHHHHHHHHHHcCCEEEEEEecc
Q 043503 384 --SQLNETYVPMLDRIGFKKLRWNVGM 408 (430)
Q Consensus 384 --~~~~~~~~~ll~~~Gfk~l~~~~~~ 408 (430)
.-..+.+..+++++||+++.+....
T Consensus 214 ~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 0123578999999999999877543
No 64
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.48 E-value=4.7e-13 Score=132.48 Aligned_cols=133 Identities=14% Similarity=0.100 Sum_probs=102.7
Q ss_pred HHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc-------CCeeEEEcccccCCCCCC
Q 043503 267 QVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR-------GLISMHISVSQRLPFFEN 337 (430)
Q Consensus 267 ~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r-------g~i~~~~~d~~~lpf~d~ 337 (430)
.++...+.....+|||+|||+|.++..++++ +.+++++ |+ +.+++.++++ +.+.+..+|+. .+++.
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~- 234 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL--DL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA- 234 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE--EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-
T ss_pred HHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe--cC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-
Confidence 3444444445567899999999999999986 6678877 66 7888777654 34899999986 45555
Q ss_pred ceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc------------------CcHHHHHHHHHHcCC
Q 043503 338 TLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS------------------QLNETYVPMLDRIGF 399 (430)
Q Consensus 338 sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~------------------~~~~~~~~ll~~~Gf 399 (430)
+||+|++.+++++| ++.....+|+++.++|+|||++++.++...+. ...++|..+++++||
T Consensus 235 ~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf 313 (332)
T 3i53_A 235 GAGGYVLSAVLHDW-DDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGL 313 (332)
T ss_dssp SCSEEEEESCGGGS-CHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTE
T ss_pred CCcEEEEehhhccC-CHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCC
Confidence 89999999999765 45457899999999999999999987654321 124679999999999
Q ss_pred EEEEEE
Q 043503 400 KKLRWN 405 (430)
Q Consensus 400 k~l~~~ 405 (430)
+.++..
T Consensus 314 ~~~~~~ 319 (332)
T 3i53_A 314 AVRAAH 319 (332)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998765
No 65
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=2.7e-13 Score=129.37 Aligned_cols=98 Identities=19% Similarity=0.367 Sum_probs=85.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.+++.++++....++.+|+..+++++++||+|++..++.|+.++ .
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~--~ 131 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERGFEVVLV--DPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN--K 131 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTTCEEEEE--ESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC--H
T ss_pred CeEEEeCCCcCHHHHHHHHcCCeEEEE--eCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc--H
Confidence 457999999999999999999999988 777999999988754348889999999889999999998888787666 8
Q ss_pred HHHHHHHHHhccCCcEEEEeec
Q 043503 358 EFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 358 ~~~L~ei~RvLrPGG~lvl~~f 379 (430)
..++.++.++|||||.+++..+
T Consensus 132 ~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 132 DKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEeC
Confidence 8999999999999999998653
No 66
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.47 E-value=2.9e-13 Score=124.39 Aligned_cols=96 Identities=23% Similarity=0.316 Sum_probs=83.1
Q ss_pred ccEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc-CCeeEEEcccccCCCCCCceeEEEEccchhhcCCc
Q 043503 277 IRIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR-GLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
..+|||+|||+|.++..+ +. +++++ |+++.+++.++++ ..+.++.+|+..+++++++||+|++..+++| .++
T Consensus 37 ~~~vLdiG~G~G~~~~~l---~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~ 110 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL---PYPQKVGV--EPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEF-VED 110 (211)
T ss_dssp CSEEEEETCTTCHHHHHC---CCSEEEEE--CCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTT-CSC
T ss_pred CCeEEEECCCCCHhHHhC---CCCeEEEE--eCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhh-cCC
Confidence 346799999999999888 66 88888 7789999998887 3578899999999998999999999999965 555
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
...++.++.|+|||||.+++..+.
T Consensus 111 --~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 111 --VERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --HHHHHHHHHHHcCCCCEEEEEecC
Confidence 789999999999999999997654
No 67
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.47 E-value=2e-13 Score=131.40 Aligned_cols=99 Identities=18% Similarity=0.217 Sum_probs=81.8
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCC-CCCceeEEEEccch
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPF-FENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf-~d~sfDlV~~~~~L 348 (430)
.+|||+|||+|.++..+++.+. +|+++ |+++.+++.++++ + .+.++++|+..+++ ++++||+|++..++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIGEYYGV--DIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCSEEEEE--ESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 4569999999999999988865 89988 6778888887765 2 27899999998887 68899999999888
Q ss_pred hhc-CCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 349 SNW-IPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 349 ~~~-~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
++. ........++.++.|+|+|||++++..
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 542 333457889999999999999999865
No 68
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.46 E-value=1.1e-13 Score=133.63 Aligned_cols=99 Identities=17% Similarity=0.253 Sum_probs=83.4
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----------CCeeEEEcccccCC---CCCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----------GLISMHISVSQRLP---FFENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~lp---f~d~sfDlV~~ 344 (430)
.+|||||||+|.++..+++++.+|+++ |+++.|++.++++ ..+.+..+++..++ +++++||+|+|
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEEGFSVTSV--DASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHCCCeEEEE--ECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEE
Confidence 456999999999999999999999998 7778999888654 12677888888887 78899999999
Q ss_pred c-cchhhcCC----chhHHHHHHHHHHhccCCcEEEEee
Q 043503 345 M-HVLSNWIP----DSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 345 ~-~~L~~~~~----d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
. .+++|+.+ .+....++.++.|+|||||++++..
T Consensus 137 ~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 137 LGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp CTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 8 88876544 2568899999999999999999764
No 69
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.46 E-value=1e-12 Score=122.76 Aligned_cols=107 Identities=20% Similarity=0.273 Sum_probs=84.7
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-----CCeeEEEcccccCCCCCCce
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-----GLISMHISVSQRLPFFENTL 339 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-----g~i~~~~~d~~~lpf~d~sf 339 (430)
.+.+...++.+ .+|||+|||+|.++..+++. .+|+++ |+++.+++.++++ ..+.++.+|+..++++ ++|
T Consensus 24 ~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~-~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~f 97 (243)
T 3d2l_A 24 VAWVLEQVEPG--KRIADIGCGTGTATLLLADH-YEVTGV--DLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPV 97 (243)
T ss_dssp HHHHHHHSCTT--CEEEEESCTTCHHHHHHTTT-SEEEEE--ESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCE
T ss_pred HHHHHHHcCCC--CeEEEecCCCCHHHHHHhhC-CeEEEE--ECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCc
Confidence 33444444432 45799999999999999988 888988 6778888887765 2478999999888865 789
Q ss_pred eEEEEcc-chhhcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 340 DIVHSMH-VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 340 DlV~~~~-~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
|+|++.. +++++.+......++.++.++|+|||.++++
T Consensus 98 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 98 DAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9999976 7766434456788999999999999999874
No 70
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.45 E-value=7.5e-13 Score=130.42 Aligned_cols=125 Identities=17% Similarity=0.170 Sum_probs=99.5
Q ss_pred CccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEcc
Q 043503 276 TIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMH 346 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~ 346 (430)
...+|||+|||+|.++..++++ +.+++++ |++ .+++.++++ + .+.++.+|+...+++++ ||+|++.+
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~ 240 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGV--DWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPN 240 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEE--ECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEE--ecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcc
Confidence 3456799999999999999988 6789988 555 777777654 3 38999999887776654 99999999
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc-----------------------CcHHHHHHHHHHcCCEEEE
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-----------------------QLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-----------------------~~~~~~~~ll~~~Gfk~l~ 403 (430)
++++| ++.....++.++.++|+|||++++.++..... ...++|..+++++||+.++
T Consensus 241 ~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~ 319 (335)
T 2r3s_A 241 FLHHF-DVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQ 319 (335)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEE
T ss_pred hhccC-CHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeee
Confidence 99765 44457899999999999999999887664321 0246788999999999888
Q ss_pred EE
Q 043503 404 WN 405 (430)
Q Consensus 404 ~~ 405 (430)
..
T Consensus 320 ~~ 321 (335)
T 2r3s_A 320 LH 321 (335)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 71
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.45 E-value=1.5e-12 Score=131.21 Aligned_cols=136 Identities=16% Similarity=0.177 Sum_probs=105.5
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc-------CCeeEEEcccccCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR-------GLISMHISVSQRLPFF 335 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r-------g~i~~~~~d~~~lpf~ 335 (430)
...++...+.....+|||+|||+|.++..++++ +.+++++ |+ +.+++.++++ +.+.+..+|+. .+++
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p 266 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLL--ER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIP 266 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE--EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCC
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEE--cC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCC
Confidence 344555555455577899999999999999988 6788887 56 7888777653 34899999987 4555
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc--------------------CcHHHHHHHHH
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS--------------------QLNETYVPMLD 395 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~--------------------~~~~~~~~ll~ 395 (430)
. .||+|++.+++++| ++.....+|+++.++|+|||++++.++..... ...++|..+++
T Consensus 267 ~-~~D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~ 344 (369)
T 3gwz_A 267 D-GADVYLIKHVLHDW-DDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLE 344 (369)
T ss_dssp S-SCSEEEEESCGGGS-CHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHH
T ss_pred C-CceEEEhhhhhccC-CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHH
Confidence 5 89999999999664 55445689999999999999999987664332 12467899999
Q ss_pred HcCCEEEEEEe
Q 043503 396 RIGFKKLRWNV 406 (430)
Q Consensus 396 ~~Gfk~l~~~~ 406 (430)
++||+.++...
T Consensus 345 ~aGf~~~~~~~ 355 (369)
T 3gwz_A 345 KSGLRVERSLP 355 (369)
T ss_dssp TTTEEEEEEEE
T ss_pred HCCCeEEEEEE
Confidence 99999998754
No 72
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.44 E-value=4.4e-13 Score=120.78 Aligned_cols=130 Identities=14% Similarity=0.104 Sum_probs=89.3
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCC-CCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLP-FFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lp-f~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.|++.|+++ | .+.++.++.+.++ +.+++||+|+++....+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~~v~~v--D~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~ 101 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSKKVYAF--DVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLP 101 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSSEEEEE--ESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC---
T ss_pred CEEEEEcCCCCHHHHHHHHhCCEEEEE--ECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCC
Confidence 457999999999999999999999998 6678888887655 3 3788888777754 45789999998632212
Q ss_pred c-----C-CchhHHHHHHHHHHhccCCcEEEEeeccccCcC--cHHH---HHHHHHHcCCEEEEEEeccc
Q 043503 351 W-----I-PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ--LNET---YVPMLDRIGFKKLRWNVGMK 409 (430)
Q Consensus 351 ~-----~-~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~--~~~~---~~~ll~~~Gfk~l~~~~~~k 409 (430)
. . .......++.++.|+|||||.+++..+...... ..+. +...+...+|.+..+.....
T Consensus 102 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 171 (185)
T 3mti_A 102 SADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQ 171 (185)
T ss_dssp --------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSC
T ss_pred CcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhcc
Confidence 1 0 112456789999999999999999766533221 1223 33334446688888775443
No 73
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.44 E-value=1.2e-12 Score=126.40 Aligned_cols=123 Identities=12% Similarity=0.108 Sum_probs=95.8
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C-CeeEEEcccccCCCCCCceeEEEEccchhhcC
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G-LISMHISVSQRLPFFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~ 352 (430)
.+|||+|||+|.++..++++|.+|+++ |+++.+++.++++ + .+.++.+|+..+++ +++||+|+++.++++ .
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~-~ 197 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGYDVTSW--DHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF-L 197 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG-S
T ss_pred CcEEEECCCCCHHHHHHHHCCCeEEEE--ECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh-C
Confidence 346999999999999999999999998 6678888776654 4 48899999988886 889999999999955 5
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEeeccccCcC----------cHHHHHHHHHHcCCEEEEEEe
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ----------LNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~----------~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
++.....++.++.++|+|||++++..++..+.. ....+..++.. |+++.+..
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~ 259 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYNE 259 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEEc
Confidence 555688999999999999999887655432211 12456666644 88887753
No 74
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.43 E-value=1.1e-12 Score=125.47 Aligned_cols=126 Identities=11% Similarity=0.063 Sum_probs=93.9
Q ss_pred ccEEEEEcCCccHHHHHHHHc-C--CEEEEEecCCChh------HHHHHHhc----C---CeeEEEcc---cccCCCCCC
Q 043503 277 IRIGLDIGGGTGTFAARMRER-N--VTIITTSLNLDGP------FNSFIASR----G---LISMHISV---SQRLPFFEN 337 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~-g--~~Vv~vdiD~s~~------~le~a~~r----g---~i~~~~~d---~~~lpf~d~ 337 (430)
..+|||||||+|.++..++++ | .+|+++|+ ++. +++.++++ + .+.++.+| ...+|++++
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~--s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDI--ASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECS--SCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEEC--CccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 345799999999999999988 4 79999854 444 67666554 3 38888888 566778889
Q ss_pred ceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc-------------------------------Cc
Q 043503 338 TLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-------------------------------QL 386 (430)
Q Consensus 338 sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-------------------------------~~ 386 (430)
+||+|++..+++| .++ ...++..+.++++|||++++.++..... ..
T Consensus 122 ~fD~v~~~~~l~~-~~~--~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 198 (275)
T 3bkx_A 122 HFDRVVLAHSLWY-FAS--ANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLIT 198 (275)
T ss_dssp CCSEEEEESCGGG-SSC--HHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCC
T ss_pred CEEEEEEccchhh-CCC--HHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCC
Confidence 9999999999965 555 4556777777777799999976543211 02
Q ss_pred HHHHHHHHHHcCCEEEEEEec
Q 043503 387 NETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 387 ~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
.+.+.++++++||+++....-
T Consensus 199 ~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 199 PDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHHHCCCeeEEEEEe
Confidence 346888999999999876543
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.43 E-value=1.6e-13 Score=129.04 Aligned_cols=122 Identities=19% Similarity=0.270 Sum_probs=90.8
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhcC-----CeeEEEcccccC--CCCCCceeEEEE-ccch
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASRG-----LISMHISVSQRL--PFFENTLDIVHS-MHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~rg-----~i~~~~~d~~~l--pf~d~sfDlV~~-~~~L 348 (430)
.+|||||||+|.++..+++.+. +|+++ |+++.|++.|+++. .+.++.+|++.+ ++++++||+|++ .+.+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWII--ECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEEEEEEE--ECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCCeEEEE--cCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 4569999999999999988754 78887 77899998887752 278899999888 888999999999 5543
Q ss_pred -hhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC-------cC----cHHHHHHHHHHcCCEE
Q 043503 349 -SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG-------SQ----LNETYVPMLDRIGFKK 401 (430)
Q Consensus 349 -~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~-------~~----~~~~~~~ll~~~Gfk~ 401 (430)
.+.........++.++.|+|||||+|++.++.... .. ..+.....+.++||+.
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 11122234567899999999999999986544211 00 1134556788999983
No 76
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.43 E-value=6.2e-13 Score=124.40 Aligned_cols=115 Identities=13% Similarity=0.076 Sum_probs=93.1
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC-CeeEEEccc-ccCCCC-CCceeEEEEccchhhcCCc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG-LISMHISVS-QRLPFF-ENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg-~i~~~~~d~-~~lpf~-d~sfDlV~~~~~L~~~~~d 354 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++. .+.++++|+ +.+|++ +++||+|+++. +
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~-------~ 120 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAARWAAY--DFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR-------G 120 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSSEEEEE--ESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES-------C
T ss_pred CeEEEeCCCCCHHHHHHHHcCCEEEEE--ECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC-------C
Confidence 456999999999999999999999998 77899999998873 389999998 678888 89999999961 1
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEec
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
...++.++.++|||||.++... .....+.+...+.+.||........
T Consensus 121 --~~~~l~~~~~~LkpgG~l~~~~----~~~~~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 121 --PTSVILRLPELAAPDAHFLYVG----PRLNVPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp --CSGGGGGHHHHEEEEEEEEEEE----SSSCCTHHHHHHHHTTCEEEEEEEE
T ss_pred --HHHHHHHHHHHcCCCcEEEEeC----CcCCHHHHHHHHHHCCCeEEEEEee
Confidence 3467899999999999998221 1123356888999999998776543
No 77
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.43 E-value=5.7e-13 Score=129.67 Aligned_cols=94 Identities=22% Similarity=0.315 Sum_probs=81.6
Q ss_pred ccEEEEEcCCccHHHHHHHH---cCCEEEEEecCCChhHHHHHHhc--------CCeeEEEcccccCCCCC------Cce
Q 043503 277 IRIGLDIGGGTGTFAARMRE---RNVTIITTSLNLDGPFNSFIASR--------GLISMHISVSQRLPFFE------NTL 339 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~---~g~~Vv~vdiD~s~~~le~a~~r--------g~i~~~~~d~~~lpf~d------~sf 339 (430)
..+|||+|||+|.++..+++ .+.+|+++ |+++.+++.++++ ..+.++++|++.+++++ ++|
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGS--DLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEE--ESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEE--eCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 35679999999999999995 47899988 6778888888764 34899999999998877 899
Q ss_pred eEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 340 DIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 340 DlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
|+|++..++++ . + ...++.++.|+|||||.|++
T Consensus 115 D~V~~~~~l~~-~-~--~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 115 DMITAVECAHW-F-D--FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEESCGGG-S-C--HHHHHHHHHHHEEEEEEEEE
T ss_pred eEEeHhhHHHH-h-C--HHHHHHHHHHhcCCCcEEEE
Confidence 99999999955 5 5 78999999999999999988
No 78
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.42 E-value=9.1e-13 Score=132.56 Aligned_cols=125 Identities=15% Similarity=0.185 Sum_probs=98.6
Q ss_pred CccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccC--CCCCCceeEEEE
Q 043503 276 TIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRL--PFFENTLDIVHS 344 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~l--pf~d~sfDlV~~ 344 (430)
..++|||||||+|.++..++++ +.+++++ |+ +.+++.++++ + .+.++.+|+... |++ ++||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIV--DL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEE--EC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEE--eC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 3456799999999999999986 6788888 55 7888887765 3 489999998775 455 78999999
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC--------------------------cHHHHHHHHHHcC
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ--------------------------LNETYVPMLDRIG 398 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~--------------------------~~~~~~~ll~~~G 398 (430)
.+++++|. +.....+|+++.++|+|||++++.+++..... ..++|.++++++|
T Consensus 255 ~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AG 333 (363)
T 3dp7_A 255 SQFLDCFS-EEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAG 333 (363)
T ss_dssp ESCSTTSC-HHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTT
T ss_pred echhhhCC-HHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcC
Confidence 99997654 44577899999999999999998775533211 2456889999999
Q ss_pred CEEEEEE
Q 043503 399 FKKLRWN 405 (430)
Q Consensus 399 fk~l~~~ 405 (430)
|+.++..
T Consensus 334 f~~v~~~ 340 (363)
T 3dp7_A 334 LEVEEIQ 340 (363)
T ss_dssp EEESCCC
T ss_pred CeEEEEE
Confidence 9987643
No 79
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.42 E-value=1.7e-12 Score=131.10 Aligned_cols=135 Identities=16% Similarity=0.209 Sum_probs=104.6
Q ss_pred HHHHHccCC-CCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeE
Q 043503 265 IDQVLSMKP-LGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDI 341 (430)
Q Consensus 265 id~lL~~~p-~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDl 341 (430)
.+.++...+ .....+|||||||+|.++..++++ +.+++++ |+ +.+++.++++..+.++.+|+.. +++++ |+
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~ 264 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINF--DL-PHVIQDAPAFSGVEHLGGDMFD-GVPKG--DA 264 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE--EC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SE
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEE--eh-HHHHHhhhhcCCCEEEecCCCC-CCCCC--CE
Confidence 455665554 344567899999999999999987 6777777 55 7787777766779999999876 66654 99
Q ss_pred EEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc--------------------------CcHHHHHHHHH
Q 043503 342 VHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS--------------------------QLNETYVPMLD 395 (430)
Q Consensus 342 V~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~--------------------------~~~~~~~~ll~ 395 (430)
|++.+++++|. +.....+|+++.++|+|||++++.++...+. ...++|.++++
T Consensus 265 v~~~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~ 343 (368)
T 3reo_A 265 IFIKWICHDWS-DEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAM 343 (368)
T ss_dssp EEEESCGGGBC-HHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHH
T ss_pred EEEechhhcCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHH
Confidence 99999997764 4457789999999999999999987653221 01356889999
Q ss_pred HcCCEEEEEEe
Q 043503 396 RIGFKKLRWNV 406 (430)
Q Consensus 396 ~~Gfk~l~~~~ 406 (430)
++||+.++...
T Consensus 344 ~AGF~~v~~~~ 354 (368)
T 3reo_A 344 ASGFRGFKVAS 354 (368)
T ss_dssp HTTCCEEEEEE
T ss_pred HCCCeeeEEEE
Confidence 99999887653
No 80
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.42 E-value=4.4e-12 Score=116.28 Aligned_cols=114 Identities=16% Similarity=0.097 Sum_probs=89.9
Q ss_pred CccEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccc
Q 043503 276 TIRIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHV 347 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~ 347 (430)
...+|||+|||+|.++..+++.+ .+|+++ |+++.+++.++++ + .+.++.+|+........+||+|++...
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFAL--ERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS 117 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEE--ECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEE--eCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC
Confidence 33567999999999999999986 889988 6678888877764 3 488899988554434478999999766
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCE
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFK 400 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk 400 (430)
+. + ...++.++.++|+|||++++..... ...+.+.+.+++.||.
T Consensus 118 ~~----~--~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 118 GG----M--LEEIIDAVDRRLKSEGVIVLNAVTL---DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp TT----C--HHHHHHHHHHHCCTTCEEEEEECBH---HHHHHHHHHHHHTTCE
T ss_pred Cc----C--HHHHHHHHHHhcCCCeEEEEEeccc---ccHHHHHHHHHHCCCc
Confidence 63 2 7789999999999999999975442 2346678889999984
No 81
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.42 E-value=3.1e-12 Score=128.08 Aligned_cols=135 Identities=18% Similarity=0.269 Sum_probs=103.9
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFF 335 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~ 335 (430)
++.++...+.....+|||||||+|.++..++++ +.+++++ |+ +.+++.++++ + .+.++.+|+...+++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTIL--NL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEE--EC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEE--ec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 344555444444567899999999999999988 6788888 56 7788777654 3 389999999887766
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC------------------c------CcHHHHH
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG------------------S------QLNETYV 391 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~------------------~------~~~~~~~ 391 (430)
+. |+|++.+++++| +++....++.++.++|+|||++++.++.... . ...++|.
T Consensus 256 ~~--D~v~~~~vlh~~-~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~ 332 (359)
T 1x19_A 256 EA--DAVLFCRILYSA-NEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYK 332 (359)
T ss_dssp CC--SEEEEESCGGGS-CHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHH
T ss_pred CC--CEEEEechhccC-CHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHH
Confidence 54 999999999775 4445789999999999999999887744211 1 2346789
Q ss_pred HHHHHcCCEEEEEE
Q 043503 392 PMLDRIGFKKLRWN 405 (430)
Q Consensus 392 ~ll~~~Gfk~l~~~ 405 (430)
++++++||+.++..
T Consensus 333 ~ll~~aGf~~v~~~ 346 (359)
T 1x19_A 333 EILESLGYKDVTMV 346 (359)
T ss_dssp HHHHHHTCEEEEEE
T ss_pred HHHHHCCCceEEEE
Confidence 99999999988765
No 82
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.42 E-value=1.3e-12 Score=123.25 Aligned_cols=110 Identities=19% Similarity=0.313 Sum_probs=85.8
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C-CeeEEEcccccCCCCCCce
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G-LISMHISVSQRLPFFENTL 339 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~lpf~d~sf 339 (430)
+..++.........+|||+|||+|.++..+++++.+|+++ |+++.|++.++++ + .+.++++|+..++++ ++|
T Consensus 30 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~f 106 (252)
T 1wzn_A 30 VEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGL--DLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEF 106 (252)
T ss_dssp HHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCE
T ss_pred HHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEE--ECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCc
Confidence 4444443332333567999999999999999999999998 6778888877654 3 378999999888764 689
Q ss_pred eEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 340 DIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 340 DlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
|+|+|.....++.+......++.++.++|+|||.++++
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 99999754445455556889999999999999999875
No 83
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.41 E-value=2.1e-12 Score=129.42 Aligned_cols=135 Identities=21% Similarity=0.227 Sum_probs=99.6
Q ss_pred HHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 266 DQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 266 d~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
+.++...+.....+|||||||+|.++..++++ +.+++++ |+ +.+++.++++ + .+.++.+|+.. +++.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~--D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 247 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLV--EL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV 247 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEE--EC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEE--eC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC
Confidence 34444443344467799999999999999988 5788887 66 7888877654 3 48999999754 3444
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeec--cccCc---------------------CcHHHHHHH
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF--FCFGS---------------------QLNETYVPM 393 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f--~~~~~---------------------~~~~~~~~l 393 (430)
.||+|++.+++++| ++.....++.++.++|+|||++++.++ ..... ...++|..+
T Consensus 248 -~~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (374)
T 1qzz_A 248 -TADVVLLSFVLLNW-SDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDL 325 (374)
T ss_dssp -CEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHH
T ss_pred -CCCEEEEeccccCC-CHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHH
Confidence 49999999999765 443456899999999999999998876 42211 134578889
Q ss_pred HHHcCCEEEEEEe
Q 043503 394 LDRIGFKKLRWNV 406 (430)
Q Consensus 394 l~~~Gfk~l~~~~ 406 (430)
++++||+.++...
T Consensus 326 l~~aGf~~~~~~~ 338 (374)
T 1qzz_A 326 AGSAGLALASERT 338 (374)
T ss_dssp HHTTTEEEEEEEE
T ss_pred HHHCCCceEEEEE
Confidence 9999999887653
No 84
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.41 E-value=2.3e-12 Score=128.27 Aligned_cols=137 Identities=15% Similarity=0.133 Sum_probs=103.0
Q ss_pred HHHHccCCCCC-ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCC-C
Q 043503 266 DQVLSMKPLGT-IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLP-F 334 (430)
Q Consensus 266 d~lL~~~p~~~-ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lp-f 334 (430)
..++...+... ..+|||||||+|.++..++++ +.+++++ |+ +.+++.++++ + .+.++.+|+...+ +
T Consensus 168 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 244 (352)
T 3mcz_A 168 VDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIW--DL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF 244 (352)
T ss_dssp HHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEE--EC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG
T ss_pred HHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEE--EC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc
Confidence 35555444333 567899999999999999987 6788887 45 5677666543 3 3899999987765 2
Q ss_pred CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc-----------------------CcHHHHH
Q 043503 335 FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-----------------------QLNETYV 391 (430)
Q Consensus 335 ~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-----------------------~~~~~~~ 391 (430)
.++.||+|++.+++++| ++.....+++++.++|+|||++++.+++..+. ...++|.
T Consensus 245 ~~~~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (352)
T 3mcz_A 245 EGGAADVVMLNDCLHYF-DAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIA 323 (352)
T ss_dssp TTCCEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHH
T ss_pred CCCCccEEEEecccccC-CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHH
Confidence 45679999999999765 55457899999999999999999977653221 1235688
Q ss_pred HHHHHcCCEEEEEEe
Q 043503 392 PMLDRIGFKKLRWNV 406 (430)
Q Consensus 392 ~ll~~~Gfk~l~~~~ 406 (430)
.+++++||+.++...
T Consensus 324 ~ll~~aGf~~~~~~~ 338 (352)
T 3mcz_A 324 GVVRDAGLAVGERSI 338 (352)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHCCCceeeecc
Confidence 999999999988443
No 85
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.41 E-value=2.7e-12 Score=126.82 Aligned_cols=134 Identities=14% Similarity=0.086 Sum_probs=101.9
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc-------CCeeEEEcccccCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR-------GLISMHISVSQRLPFF 335 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r-------g~i~~~~~d~~~lpf~ 335 (430)
...++...+... .+|||+|||+|.++..++++ +.+++++ |+ +.+++.++++ ..+.++.+|+.. +++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVML--DR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEE--EC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEe--Cc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC
Confidence 344444444344 67899999999999999987 6788888 55 6666666553 358999999866 555
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc---------------------CcHHHHHHHH
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS---------------------QLNETYVPML 394 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~---------------------~~~~~~~~ll 394 (430)
++||+|++.+++++|. +.....++.++.++|+|||++++.++...+. ...++|.+++
T Consensus 232 -~~~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll 309 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDLD-EAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLL 309 (334)
T ss_dssp -SSCSEEEEESCGGGCC-HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHH
T ss_pred -CCCCEEEEchhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHH
Confidence 6799999999997764 4346789999999999999999987653221 1245788999
Q ss_pred HHcCCEEEEEE
Q 043503 395 DRIGFKKLRWN 405 (430)
Q Consensus 395 ~~~Gfk~l~~~ 405 (430)
+++||+.++..
T Consensus 310 ~~aGf~~~~~~ 320 (334)
T 2ip2_A 310 GRGGFAVERIV 320 (334)
T ss_dssp HHTTEEEEEEE
T ss_pred HHCCCceeEEE
Confidence 99999988765
No 86
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.41 E-value=1.3e-12 Score=119.67 Aligned_cols=115 Identities=12% Similarity=0.100 Sum_probs=93.2
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----CC--eeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++..+++.+. +|+++ |+++.+++.++++ +. +.+..+|+... .+++||+|+++..+++
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGAKSVLAT--DISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILAEI 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCHHH
T ss_pred CEEEEECCCCCHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcHHH
Confidence 4569999999999999998855 88988 6678888877765 33 78888888664 3689999999876643
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
+..++.++.++|+|||++++.++.. ...+.+...+++.||+.+...
T Consensus 138 ------~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 138 ------LLDLIPQLDSHLNEDGQVIFSGIDY---LQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp ------HHHHGGGSGGGEEEEEEEEEEEEEG---GGHHHHHHHHHHTTEEEEEEE
T ss_pred ------HHHHHHHHHHhcCCCCEEEEEecCc---ccHHHHHHHHHHcCCceEEee
Confidence 5678999999999999999976653 235678889999999988754
No 87
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=5.7e-13 Score=125.36 Aligned_cols=99 Identities=15% Similarity=0.026 Sum_probs=82.3
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC---CeeEEEcccccCCCCC-----CceeEEEEccchhh
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG---LISMHISVSQRLPFFE-----NTLDIVHSMHVLSN 350 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg---~i~~~~~d~~~lpf~d-----~sfDlV~~~~~L~~ 350 (430)
+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++. .+.++++|+..+++.. ..||+|++..++++
T Consensus 59 ~vLD~GcG~G~~~~~la~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~ 136 (245)
T 3ggd_A 59 PLIDFACGNGTQTKFLSQFFPRVIGL--DVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHH 136 (245)
T ss_dssp CEEEETCTTSHHHHHHHHHSSCEEEE--ESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTT
T ss_pred eEEEEcCCCCHHHHHHHHhCCCEEEE--ECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchhhc
Confidence 46999999999999999998899988 66789999888762 4889999988765432 34999999888854
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
.++.....++.++.++|||||++++.++.
T Consensus 137 -~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 137 -IPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp -SCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred -CCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 66555889999999999999999887765
No 88
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.41 E-value=2.2e-12 Score=118.93 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=88.9
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhHH
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLE 358 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~ 358 (430)
+|||+|||+|.++..++ .+++++|++.. .+.+..+|+..+++++++||+|++..++ |+ ++ ..
T Consensus 70 ~vLDiG~G~G~~~~~l~---~~v~~~D~s~~-----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~--~~ 131 (215)
T 2zfu_A 70 VVADFGCGDCRLASSIR---NPVHCFDLASL-----------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TN--IR 131 (215)
T ss_dssp CEEEETCTTCHHHHHCC---SCEEEEESSCS-----------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-SC--HH
T ss_pred eEEEECCcCCHHHHHhh---ccEEEEeCCCC-----------CceEEEeccccCCCCCCCEeEEEEehhc-cc-cC--HH
Confidence 45999999999998873 68899866543 3678899999999889999999999988 43 44 78
Q ss_pred HHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 359 FTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 359 ~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
.++.++.++|+|||++++.++.... ...+.+..++++.||+++....
T Consensus 132 ~~l~~~~~~L~~gG~l~i~~~~~~~-~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 132 DFLEEANRVLKPGGLLKVAEVSSRF-EDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEEECGGGC-SCHHHHHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHhCCCCeEEEEEEcCCCC-CCHHHHHHHHHHCCCEEEEEec
Confidence 9999999999999999998755321 2457789999999999887543
No 89
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.40 E-value=2.4e-12 Score=129.87 Aligned_cols=135 Identities=15% Similarity=0.179 Sum_probs=104.4
Q ss_pred HHHHHccCC-CCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeE
Q 043503 265 IDQVLSMKP-LGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDI 341 (430)
Q Consensus 265 id~lL~~~p-~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDl 341 (430)
+..++...+ .....+|||||||+|.++..++++ +.+++++ |+ +.+++.++++..+.++.+|+.. |++++ |+
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~ 262 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNF--DL-PHVISEAPQFPGVTHVGGDMFK-EVPSG--DT 262 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE--EC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SE
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEe--cC-HHHHHhhhhcCCeEEEeCCcCC-CCCCC--CE
Confidence 344555444 344567899999999999999987 6778777 44 7777777766779999999877 77754 99
Q ss_pred EEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc--------------------------CcHHHHHHHHH
Q 043503 342 VHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS--------------------------QLNETYVPMLD 395 (430)
Q Consensus 342 V~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~--------------------------~~~~~~~~ll~ 395 (430)
|++.+++++|. ++....+|+++.++|||||++++.+++..+. ...++|..+++
T Consensus 263 v~~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~ 341 (364)
T 3p9c_A 263 ILMKWILHDWS-DQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALAR 341 (364)
T ss_dssp EEEESCGGGSC-HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHH
T ss_pred EEehHHhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHH
Confidence 99999997764 4457889999999999999999987664321 02356889999
Q ss_pred HcCCEEEEEEe
Q 043503 396 RIGFKKLRWNV 406 (430)
Q Consensus 396 ~~Gfk~l~~~~ 406 (430)
++||+.++...
T Consensus 342 ~AGF~~v~~~~ 352 (364)
T 3p9c_A 342 GAGFTGVKSTY 352 (364)
T ss_dssp HTTCCEEEEEE
T ss_pred HCCCceEEEEE
Confidence 99999888653
No 90
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.40 E-value=2.1e-12 Score=116.10 Aligned_cols=116 Identities=17% Similarity=0.157 Sum_probs=91.0
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch---
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS--- 355 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~--- 355 (430)
+|||+|||+|.++..+++++ +|+++ |+++.|++. ...+.++++|+.. ++++++||+|+++..+. +.++.
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~-~v~gv--D~s~~~~~~---~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~-~~~~~~~~ 97 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN-TVVST--DLNIRALES---HRGGNLVRADLLC-SINQESVDVVVFNPPYV-PDTDDPII 97 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS-EEEEE--ESCHHHHHT---CSSSCEEECSTTT-TBCGGGCSEEEECCCCB-TTCCCTTT
T ss_pred eEEEeccCccHHHHHHHhcC-cEEEE--ECCHHHHhc---ccCCeEEECChhh-hcccCCCCEEEECCCCc-cCCccccc
Confidence 56999999999999999999 99988 667877776 4457899999877 66678999999987763 33221
Q ss_pred ----hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 356 ----MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 356 ----~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
....++.++.+.| |||.+++.... ....+.+.+++++.||+......
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~---~~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIE---ANRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEG---GGCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEec---CCCHHHHHHHHHHCCCcEEEEEe
Confidence 2356889999999 99999986533 23457788999999999876553
No 91
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.40 E-value=4.2e-12 Score=117.63 Aligned_cols=119 Identities=15% Similarity=0.077 Sum_probs=93.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.+++.|+++ | .+.++.+|+........+||+|++...+
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~~v~~v--D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-- 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGGRAITI--EPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-- 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC--
T ss_pred CEEEEecCCCCHHHHHHHHcCCEEEEE--eCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc--
Confidence 456999999999999999999999998 6678888877765 2 4889999987733234579999986533
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEeccc
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVGMK 409 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~~k 409 (430)
+ .. ++.++.++|||||++++.... .+....+.+.+++.||++.++.....
T Consensus 133 ---~--~~-~l~~~~~~LkpgG~lv~~~~~---~~~~~~~~~~l~~~g~~i~~i~~~~~ 182 (204)
T 3njr_A 133 ---S--QA-LYDRLWEWLAPGTRIVANAVT---LESETLLTQLHARHGGQLLRIDIAQA 182 (204)
T ss_dssp ---C--HH-HHHHHHHHSCTTCEEEEEECS---HHHHHHHHHHHHHHCSEEEEEEEEEE
T ss_pred ---c--HH-HHHHHHHhcCCCcEEEEEecC---cccHHHHHHHHHhCCCcEEEEEeecc
Confidence 2 55 999999999999999997543 23345677888999999888765443
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.40 E-value=2.7e-12 Score=118.87 Aligned_cols=123 Identities=18% Similarity=0.252 Sum_probs=94.3
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCC--CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLP--FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lp--f~d~sfDlV~~~~~ 347 (430)
.+|||+|||+|.++..+++. +.+++++ |+++.+++.|+++ | .+.++.+|+..++ +++++||+|+++..
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~~v~gv--D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDINYIGI--DIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEE--ESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CeEEEEccCcCHHHHHHHHHCCCCCEEEE--EcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 45799999999999999988 5789988 6678888777654 3 4889999998877 77889999999755
Q ss_pred hhhcCCch------hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 348 LSNWIPDS------MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 348 L~~~~~d~------~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
. .|.... ....++.++.++|+|||.+++.. ......+...+.+.+.||..+....
T Consensus 121 ~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 121 D-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT---DNRGLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp C-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE---SCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred C-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe---CCHHHHHHHHHHHHHCCCeeeeccc
Confidence 3 332210 13579999999999999999863 2223345667788899999887654
No 93
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.39 E-value=3.5e-12 Score=113.46 Aligned_cols=119 Identities=15% Similarity=0.154 Sum_probs=90.3
Q ss_pred ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEccc-ccCCCCCCceeEEEEcc
Q 043503 277 IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVS-QRLPFFENTLDIVHSMH 346 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~-~~lpf~d~sfDlV~~~~ 346 (430)
..+|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ + .+ ++.+|. +.++..+++||+|++..
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCF--EISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEE--CSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEE--eCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC
Confidence 346799999999999999988 6788888 7788888888765 3 35 666776 44443338999999988
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEecc
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVGM 408 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~~ 408 (430)
.+++ ..++.++.++|+|||++++..+.. .....+...+++.|+...+.....
T Consensus 103 ~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 154 (178)
T 3hm2_A 103 GLTA-------PGVFAAAWKRLPVGGRLVANAVTV---ESEQMLWALRKQFGGTISSFAISH 154 (178)
T ss_dssp -TTC-------TTHHHHHHHTCCTTCEEEEEECSH---HHHHHHHHHHHHHCCEEEEEEEEE
T ss_pred cccH-------HHHHHHHHHhcCCCCEEEEEeecc---ccHHHHHHHHHHcCCeeEEEEeec
Confidence 8743 357999999999999999976542 234567778889999887766543
No 94
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.39 E-value=8.8e-13 Score=120.49 Aligned_cols=115 Identities=13% Similarity=0.153 Sum_probs=90.2
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCCCceeEEEEccchhhcC
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~ 352 (430)
.+|||+|||+|.++..+++.+. +|+++ |+++.+++.++++ ..+.+.++|+..+++++++||+|++..++++..
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~~v~~~--D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFPNVTSV--DYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCCCEEEE--ESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHT
T ss_pred CeEEEECCCCcHHHHHHHHcCCCcEEEE--eCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhc
Confidence 3469999999999999999976 88888 6778889888876 348899999998888889999999988885533
Q ss_pred C------------chhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCC
Q 043503 353 P------------DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGF 399 (430)
Q Consensus 353 ~------------d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gf 399 (430)
. ......++.++.|+|+|||.+++..+.. ......++...||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~-----~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 122 AGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA-----PHFRTRHYAQAYY 175 (215)
T ss_dssp TTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC-----HHHHHHHHCCGGG
T ss_pred cccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC-----cHHHHHHHhcccc
Confidence 0 1246889999999999999999976542 1223445555665
No 95
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.38 E-value=1.8e-12 Score=125.73 Aligned_cols=111 Identities=9% Similarity=0.033 Sum_probs=82.4
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCC-----CCCce
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPF-----FENTL 339 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf-----~d~sf 339 (430)
++.++...+.....+|||+|||+|.++..+++++.+|+++ |+++.|++.++++-.-.++..++..++. .+++|
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gv--D~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVF--DFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHF 111 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEE--ECCHHHHHHHHHHHHhccceeeeeecccccccccCCCc
Confidence 3444444443344567999999999999999999999998 7789999999877331133344433332 25789
Q ss_pred eEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 340 DIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 340 DlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
|+|+++.+++|+. ......++.++.++| |||.++++..
T Consensus 112 D~Vv~~~~l~~~~-~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 112 DFVLNDRLINRFT-TEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp SEEEEESCGGGSC-HHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cEEEEhhhhHhCC-HHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 9999999996654 335788999999999 9999998743
No 96
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.38 E-value=1e-12 Score=129.62 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=76.0
Q ss_pred cEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----CC--------eeEEEccc------ccC--CCCC
Q 043503 278 RIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----GL--------ISMHISVS------QRL--PFFE 336 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g~--------i~~~~~d~------~~l--pf~d 336 (430)
.+|||||||+|..+..++.. +.+|+|+ |+|+.|++.|+++ +. +.+.+.+. +.+ ++++
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~Gi--D~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVAT--DPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEE--ECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 46799999999876666665 5789988 7789999988765 31 45667766 333 3567
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
++||+|.|..++++.........++.++.|+|||||+|+++..
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 8999999999884422322468999999999999999987653
No 97
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.37 E-value=3.4e-12 Score=118.96 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=92.4
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCC--CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLP--FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lp--f~d~sfDlV~~~~~ 347 (430)
.+|||||||+|.++..++++ +.+++++ |+++.+++.|+++ | .+.++.+|+..++ +++++||.|++...
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~~v~gi--D~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDINYIGI--ELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEE--CSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred ceEEEEecCCCHHHHHHHHHCCCCCEEEE--EechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 45799999999999999987 6889988 7788888877654 4 3889999988876 77889999988543
Q ss_pred hhhcCCch------hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 348 LSNWIPDS------MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 348 L~~~~~d~------~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
. .|.... ....++.++.++|+|||.|++.. ......+.....+.+.||.......
T Consensus 118 ~-p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t---d~~~~~~~~~~~~~~~g~~~~~~~~ 178 (213)
T 2fca_A 118 D-PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT---DNRGLFEYSLKSFSEYGLLLTYVSL 178 (213)
T ss_dssp C-CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE---SCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred C-CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe---CCHHHHHHHHHHHHHCCCccccccc
Confidence 3 222110 13578999999999999999864 1222345566778888998776543
No 98
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=3.1e-13 Score=128.09 Aligned_cols=121 Identities=17% Similarity=0.225 Sum_probs=87.2
Q ss_pred cEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccC--CCCCCceeEEEEc----
Q 043503 278 RIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRL--PFFENTLDIVHSM---- 345 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~l--pf~d~sfDlV~~~---- 345 (430)
.+|||||||+|..+..+++. +.+|+++ |+++.+++.|+++ +. +.++.++++.+ ++++++||.|+.-
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~~v~~i--d~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWII--ECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEEEEEEE--ECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEECCCccHHHHHHHHhCCcEEEEE--eCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 45699999999999999987 4577777 7779999988865 22 67788887654 4778999999862
Q ss_pred -cchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc-------C----cHHHHHHHHHHcCCEEEE
Q 043503 346 -HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-------Q----LNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 346 -~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-------~----~~~~~~~ll~~~Gfk~l~ 403 (430)
..+.| .+ ....++.++.|+|||||+|.+.+....+. . ..+.+...+.++||+...
T Consensus 140 ~~~~~~-~~--~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 140 SEETWH-TH--QFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp BGGGTT-TH--HHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGG
T ss_pred ccchhh-hc--chhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEE
Confidence 22222 22 37889999999999999998865332111 0 223456678889998543
No 99
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.37 E-value=2.1e-12 Score=130.06 Aligned_cols=134 Identities=18% Similarity=0.169 Sum_probs=100.5
Q ss_pred HHHHccCC-CCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEE
Q 043503 266 DQVLSMKP-LGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIV 342 (430)
Q Consensus 266 d~lL~~~p-~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV 342 (430)
+.++...+ .....+|||||||+|.++..++++ +.+++++ |+ +.+++.+++...+.++.+|+.. ++++ ||+|
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~--D~-~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v 271 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINF--DL-PQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAM 271 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE--EC-HHHHTTCCCCTTEEEEECCTTT-CCCC--EEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEe--Ch-HHHHHhhhhcCCCEEEeCCccc-CCCC--CCEE
Confidence 44444443 234467899999999999999988 4666666 55 7787777665558999999876 6654 9999
Q ss_pred EEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC-------------------------cHHHHHHHHHHc
Q 043503 343 HSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ-------------------------LNETYVPMLDRI 397 (430)
Q Consensus 343 ~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~-------------------------~~~~~~~ll~~~ 397 (430)
++.+++++| ++.....+|+++.++|+|||++++.++...... ..++|..+++++
T Consensus 272 ~~~~~lh~~-~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 350 (372)
T 1fp1_D 272 ILKAVCHNW-SDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLS 350 (372)
T ss_dssp EEESSGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHT
T ss_pred EEecccccC-CHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHC
Confidence 999999765 553456899999999999999998865532210 235688899999
Q ss_pred CCEEEEEEe
Q 043503 398 GFKKLRWNV 406 (430)
Q Consensus 398 Gfk~l~~~~ 406 (430)
||+.++...
T Consensus 351 Gf~~~~~~~ 359 (372)
T 1fp1_D 351 GFSKFQVAC 359 (372)
T ss_dssp TCSEEEEEE
T ss_pred CCceEEEEE
Confidence 999887653
No 100
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.37 E-value=3.3e-12 Score=122.40 Aligned_cols=116 Identities=15% Similarity=0.113 Sum_probs=91.7
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccCCCCCCceeEEEEccchhhcC
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRLPFFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~ 352 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ +. +.+..+|.... +++++||+|+++...++
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~~v~gv--Di~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~-- 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGGKALGV--DIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL-- 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEE--ESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH--
T ss_pred CEEEEecCCCcHHHHHHHHhCCeEEEE--ECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH--
Confidence 456999999999999999998899998 5567777766654 44 78888887552 44678999999654422
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
+..++.++.++|+|||+++++.+.. ...+.+...+++.||+.+...
T Consensus 197 ----~~~~l~~~~~~LkpgG~lils~~~~---~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 197 ----HAALAPRYREALVPGGRALLTGILK---DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp ----HHHHHHHHHHHEEEEEEEEEEEEEG---GGHHHHHHHHHHTTCEEEEEE
T ss_pred ----HHHHHHHHHHHcCCCCEEEEEeecc---CCHHHHHHHHHHCCCEEEEEe
Confidence 5689999999999999999987663 235778889999999988754
No 101
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.37 E-value=6.1e-12 Score=125.59 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=97.3
Q ss_pred HHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHh-----cCCeeEEEcccccCCCCCCc
Q 043503 266 DQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIAS-----RGLISMHISVSQRLPFFENT 338 (430)
Q Consensus 266 d~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~-----rg~i~~~~~d~~~lpf~d~s 338 (430)
+.++...+.....+|||||||+|.++..++++ +.+++++ |+ +.+...+.. .+.+.++.+|+. .+++ +
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~ 247 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLL--DR-AEVVARHRLDAPDVAGRWKVVEGDFL-REVP--H 247 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEE--EC-HHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--C
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEe--cC-HHHhhcccccccCCCCCeEEEecCCC-CCCC--C
Confidence 34454445445567899999999999999987 4566666 54 334331110 134889999985 3444 8
Q ss_pred eeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCc---------------------CcHHHHHHHHHHc
Q 043503 339 LDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS---------------------QLNETYVPMLDRI 397 (430)
Q Consensus 339 fDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~---------------------~~~~~~~~ll~~~ 397 (430)
||+|++.+++++| ++.....+|+++.++|||||++++.++...+. ...++|.++++++
T Consensus 248 ~D~v~~~~vlh~~-~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 326 (348)
T 3lst_A 248 ADVHVLKRILHNW-GDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAA 326 (348)
T ss_dssp CSEEEEESCGGGS-CHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHT
T ss_pred CcEEEEehhccCC-CHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHC
Confidence 9999999999765 45445799999999999999999987654321 1245789999999
Q ss_pred CCEEEEEEe
Q 043503 398 GFKKLRWNV 406 (430)
Q Consensus 398 Gfk~l~~~~ 406 (430)
||+.++...
T Consensus 327 Gf~~~~~~~ 335 (348)
T 3lst_A 327 GLRLDRVVG 335 (348)
T ss_dssp TEEEEEEEE
T ss_pred CCceEEEEE
Confidence 999988664
No 102
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.37 E-value=1.2e-11 Score=124.28 Aligned_cols=135 Identities=20% Similarity=0.276 Sum_probs=104.7
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc------CCeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR------GLISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r------g~i~~~~~d~~~lpf~d 336 (430)
...++...+....++|||||||+|.++..++++ +.+++.. |. +.+++.++++ +.+.++.+|+...|.+
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~--dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~- 243 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVF--DI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP- 243 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEE--EC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC-
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEec--cC-HHHHHHHHHhhhhcccCceeeecCccccCCCC-
Confidence 445565556566678899999999999999998 5666655 44 6778777654 3489999998765544
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC----------------------cHHHHHHHH
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ----------------------LNETYVPML 394 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~----------------------~~~~~~~ll 394 (430)
.+|+|++.+++++|. ++....+|++++++|+|||.+++.+++..+.. ..++|..++
T Consensus 244 -~~D~~~~~~vlh~~~-d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 244 -EADLYILARVLHDWA-DGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp -CCSEEEEESSGGGSC-HHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred -CceEEEeeeecccCC-HHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 479999999998765 44578899999999999999999887643221 135689999
Q ss_pred HHcCCEEEEEE
Q 043503 395 DRIGFKKLRWN 405 (430)
Q Consensus 395 ~~~Gfk~l~~~ 405 (430)
+++||+.++..
T Consensus 322 ~~AGf~~v~v~ 332 (353)
T 4a6d_A 322 SSAGFRDFQFK 332 (353)
T ss_dssp HHHTCEEEEEE
T ss_pred HHCCCceEEEE
Confidence 99999998865
No 103
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.36 E-value=4.2e-12 Score=113.65 Aligned_cols=125 Identities=10% Similarity=0.078 Sum_probs=91.2
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C----CeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G----LISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g----~i~~~~~d~~~lpf~d 336 (430)
.+.++..+......+|||+|||+|.++..+++.+.+++++ |+++.+++.++++ + .+.++.+|+.. ++++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~--D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 117 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMA--DINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKD 117 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEE--ESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTT
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEE--ECCHHHHHHHHHHHHHcCCCccceEEEECchhc-cccc
Confidence 3444444443344567999999999999999988899998 6678888777654 3 27888888766 3457
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHc
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRI 397 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~ 397 (430)
++||+|+++..+++ . ......++.++.++|+|||.+++..... ...+.+.+.+++.
T Consensus 118 ~~~D~v~~~~~~~~-~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~l~~~ 173 (194)
T 1dus_A 118 RKYNKIITNPPIRA-G-KEVLHRIIEEGKELLKDNGEIWVVIQTK---QGAKSLAKYMKDV 173 (194)
T ss_dssp SCEEEEEECCCSTT-C-HHHHHHHHHHHHHHEEEEEEEEEEEEST---HHHHHHHHHHHHH
T ss_pred CCceEEEECCCccc-c-hhHHHHHHHHHHHHcCCCCEEEEEECCC---CChHHHHHHHHHH
Confidence 79999999877632 2 2247789999999999999999976542 2234455566665
No 104
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.36 E-value=7e-12 Score=116.74 Aligned_cols=125 Identities=18% Similarity=0.196 Sum_probs=92.8
Q ss_pred cEEEEEcCC-ccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----C-CeeEEEcccccC-CCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGG-TGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----G-LISMHISVSQRL-PFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcG-tG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~l-pf~d~sfDlV~~~~~L~ 349 (430)
.+|||+||| +|.++..+++. +.+|+++ |+++.+++.++++ + .+.++.+|+..+ ++++++||+|+++..+.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNCKVTAT--EVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCCEEEEE--ECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEE--ECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 457999999 99999999998 8999998 6678888777654 4 378899986543 45678999999975552
Q ss_pred hcCC----------------chhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 350 NWIP----------------DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 350 ~~~~----------------d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
+... ......++.++.++|||||++++... ......+.+.+.+++.||.+.....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP--DKEKLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec--ccHhHHHHHHHHHHHcCCceEEEEe
Confidence 2111 11247899999999999999998532 2223346788899999998776544
No 105
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.36 E-value=5.2e-12 Score=126.07 Aligned_cols=133 Identities=22% Similarity=0.246 Sum_probs=98.0
Q ss_pred HHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCc
Q 043503 268 VLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENT 338 (430)
Q Consensus 268 lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~s 338 (430)
++...+.....+|||||||+|.++..++++ +.+++++ |+ +.+++.++++ + .+.++.+|+.. +++. .
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~--D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~ 249 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVL--EM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-K 249 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE--EC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-C
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEe--cC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-C
Confidence 333333334456799999999999999988 4677766 55 6677766653 3 48999998754 3444 4
Q ss_pred eeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc-ccCc---------------------CcHHHHHHHHHH
Q 043503 339 LDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF-CFGS---------------------QLNETYVPMLDR 396 (430)
Q Consensus 339 fDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~-~~~~---------------------~~~~~~~~ll~~ 396 (430)
||+|++.+++++| ++.....++.++.++|+|||++++.++. ..+. ...++|..++++
T Consensus 250 ~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (360)
T 1tw3_A 250 ADAIILSFVLLNW-PDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAAS 328 (360)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred ccEEEEcccccCC-CHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHH
Confidence 9999999999765 4434578999999999999999988766 2111 123568899999
Q ss_pred cCCEEEEEEe
Q 043503 397 IGFKKLRWNV 406 (430)
Q Consensus 397 ~Gfk~l~~~~ 406 (430)
+||+.++...
T Consensus 329 aGf~~~~~~~ 338 (360)
T 1tw3_A 329 AGLVVEEVRQ 338 (360)
T ss_dssp TTEEEEEEEE
T ss_pred CCCeEEEEEe
Confidence 9999887653
No 106
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.34 E-value=6.5e-12 Score=112.23 Aligned_cols=113 Identities=17% Similarity=0.198 Sum_probs=87.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-------CCeeEEEcccccCCCCC-CceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-------GLISMHISVSQRLPFFE-NTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-------g~i~~~~~d~~~lpf~d-~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ ..+.+..+|... ++++ ++||+|++..++.
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~~~v~~~--D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~ 111 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRVRRVYAI--DRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSGG 111 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTSSEEEEE--ESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCCTT
T ss_pred CEEEEECCCCCHHHHHHHHhcCEEEEE--ECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCchH
Confidence 456999999999999999988889988 6678888777654 247888888765 3333 5899999976653
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEE
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l 402 (430)
+ ...++.++.++|+|||.+++..+. ......+...+++.||.+.
T Consensus 112 ~------~~~~l~~~~~~l~~gG~l~~~~~~---~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 112 E------LQEILRIIKDKLKPGGRIIVTAIL---LETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp C------HHHHHHHHHHTEEEEEEEEEEECB---HHHHHHHHHHHHHTTCCCE
T ss_pred H------HHHHHHHHHHhcCCCcEEEEEecC---cchHHHHHHHHHHCCCceE
Confidence 2 678999999999999999987543 2234567788999999543
No 107
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.34 E-value=5.6e-12 Score=122.45 Aligned_cols=103 Identities=10% Similarity=0.108 Sum_probs=82.5
Q ss_pred CccEEEEEcCCc---cHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCC-----------CC
Q 043503 276 TIRIGLDIGGGT---GTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLP-----------FF 335 (430)
Q Consensus 276 ~ir~VLDIGcGt---G~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lp-----------f~ 335 (430)
.++.|||||||+ |.++..+.+. +.+|+++ |+++.|++.++++ +.+.++.+|+...+ ++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~v--D~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYV--DIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEE--ESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEE--ECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 456789999999 9888777664 6899988 6678999888765 45899999986421 22
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
..+||+|++..+++ |++++....+|.++.++|+|||+|+++++..
T Consensus 155 ~~~~d~v~~~~vlh-~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 155 FSRPAAIMLVGMLH-YLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TTSCCEEEETTTGG-GSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCEEEEEechhh-hCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 35899999999995 4655468899999999999999999998764
No 108
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.34 E-value=4.8e-12 Score=117.09 Aligned_cols=126 Identities=17% Similarity=0.221 Sum_probs=90.7
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHH----Hh----cC--CeeEEEcccccCCCCCCceeEEEEc
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFI----AS----RG--LISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a----~~----rg--~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
.+|||+|||+|.++..++++ +.+|+++ |+++.|++.+ ++ ++ .+.++++|+..+|+++++ |.|+..
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gv--D~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVAL--DADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEE--ESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 45699999999999999998 6889988 6678877642 21 23 388999999999988777 777743
Q ss_pred cchh----hcCCchhHHHHHHHHHHhccCCcEEEEeecccc----C------cC-----cHHHHHHHHHHcCCEEEEEEe
Q 043503 346 HVLS----NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF----G------SQ-----LNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 346 ~~L~----~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~----~------~~-----~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
.... ++.++ ...++.++.|+|||||.++++..... . .. ..+.+..++.++||++.....
T Consensus 106 ~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 106 MPWGSLLRGVLGS--SPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRY 183 (218)
T ss_dssp SCCHHHHHHHHTS--SSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ccchhhhhhhhcc--HHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeeec
Confidence 2211 23444 36899999999999999998532110 0 00 123477899999999988664
Q ss_pred cc
Q 043503 407 GM 408 (430)
Q Consensus 407 ~~ 408 (430)
..
T Consensus 184 ~~ 185 (218)
T 3mq2_A 184 LE 185 (218)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=2.1e-11 Score=114.39 Aligned_cols=128 Identities=13% Similarity=0.140 Sum_probs=90.8
Q ss_pred HccCCCCCccEEEEEcCCccHHHHHHHHc-C-CEEEEEecCCChhHHHHHHhc----CCeeEEEccccc----CCCCCCc
Q 043503 269 LSMKPLGTIRIGLDIGGGTGTFAARMRER-N-VTIITTSLNLDGPFNSFIASR----GLISMHISVSQR----LPFFENT 338 (430)
Q Consensus 269 L~~~p~~~ir~VLDIGcGtG~~a~~La~~-g-~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~----lpf~d~s 338 (430)
+...+.....+|||+|||+|.++..+++. + .+|+++ |+++.+++.++++ ..+.++.+|+.. +++. ++
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~ 143 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAI--EYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EK 143 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEE--ESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CC
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEE--ECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-cc
Confidence 44333333456799999999999999988 4 789988 6778888777654 348888999877 6666 78
Q ss_pred eeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc-ccCcC------cHHHHHHHHHHcCCEEEEEE
Q 043503 339 LDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF-CFGSQ------LNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 339 fDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~-~~~~~------~~~~~~~ll~~~Gfk~l~~~ 405 (430)
||+|++ +....+....++.++.++|||||++++.... +.... ..+++. ++.+.||+.++..
T Consensus 144 ~D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 144 VDVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp EEEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred EEEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE
Confidence 999994 2112223467899999999999999996111 11111 124555 8889999988755
No 110
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=1.7e-11 Score=108.86 Aligned_cols=113 Identities=7% Similarity=0.020 Sum_probs=89.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~ 351 (430)
.+|||+|||+|.++..+++.+.+++++ |+++.+++.++++ + .+.++.+|+.. ++++++||+|++..+
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~---- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCKFVYAI--DYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT---- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSSEEEEE--ECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC----
T ss_pred CEEEEeCCCCCHHHHHHHhcCCeEEEE--eCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc----
Confidence 456999999999999999988899998 6678888877765 3 48889998876 666789999999766
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
. ....++.++.++ |||.+++.... ......+.+.+++.||.+....
T Consensus 110 -~--~~~~~l~~~~~~--~gG~l~~~~~~---~~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 110 -K--NIEKIIEILDKK--KINHIVANTIV---LENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp -S--CHHHHHHHHHHT--TCCEEEEEESC---HHHHHHHHHHHHHTTCEEEEEE
T ss_pred -c--cHHHHHHHHhhC--CCCEEEEEecc---cccHHHHHHHHHHcCCeEEEEE
Confidence 2 277899999999 99999997633 2234567888999998766543
No 111
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.32 E-value=8.9e-12 Score=124.48 Aligned_cols=123 Identities=17% Similarity=0.158 Sum_probs=96.6
Q ss_pred ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc
Q 043503 277 IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
..+|||||||+|.++..++++ +.+++++ |+ +.+++.+++...+.++.+|+.. ++++ ||+|++.+++++| ++
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~-~d 261 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVF--DR-PQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYILHNW-TD 261 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEE--EC-HHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESCGGGS-CH
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEe--eC-HHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehhhccC-CH
Confidence 356799999999999999987 6788888 55 7888777665558999999855 5553 9999999999775 44
Q ss_pred hhHHHHHHHHHHhccC---CcEEEEeeccccCcC------------------------cHHHHHHHHHHcCCEEEEEEe
Q 043503 355 SMLEFTLYDIYRLLRP---GGIFWLDRFFCFGSQ------------------------LNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrP---GG~lvl~~f~~~~~~------------------------~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
.....+|+++.++||| ||++++.++...... ..++|.++++++||+.++...
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 3456899999999999 999998876543211 135788999999999887653
No 112
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.31 E-value=8e-12 Score=118.00 Aligned_cols=118 Identities=13% Similarity=0.101 Sum_probs=89.8
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccCCCC---CCceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRLPFF---ENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~lpf~---d~sfDlV~~~~ 346 (430)
.+|||+|||+|.++..++.. +.+|+++ |+++.+++.++++ |. +.++++|++.+++. +++||+|++..
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHLHVTIV--DSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTCEEEEE--ESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCEEEEE--eCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 46799999999999999853 7889988 6778888777653 43 88999999888764 67999999954
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
+ .+ ...++.++.++|+|||+|++..-.. .......+.+.+++.||+..+..
T Consensus 150 ~-----~~--~~~~l~~~~~~LkpgG~l~~~~g~~-~~~~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 150 V-----AR--LSVLSELCLPLVKKNGLFVALKAAS-AEEELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp C-----SC--HHHHHHHHGGGEEEEEEEEEEECC--CHHHHHHHHHHHHHTTEEEEEEE
T ss_pred c-----CC--HHHHHHHHHHhcCCCCEEEEEeCCC-chHHHHHHHHHHHHcCCeEeEEE
Confidence 2 33 7889999999999999998853111 11123456678889999877654
No 113
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.30 E-value=3e-11 Score=115.21 Aligned_cols=124 Identities=14% Similarity=0.041 Sum_probs=89.1
Q ss_pred CCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CCeeEEEcccc---cCCCCCCceeEEEE
Q 043503 275 GTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GLISMHISVSQ---RLPFFENTLDIVHS 344 (430)
Q Consensus 275 ~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~---~lpf~d~sfDlV~~ 344 (430)
+...+|||+|||+|.++..+++. ..+|+++ |+++.|++.+.++ +.+..+.++.. ..++..+++|+|++
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~av--D~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGV--EFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEE--ECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEE--eCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 33345699999999999999987 4688888 7788988777644 55777777654 34566789999998
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc------cCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC------FGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~------~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.... ++ ....++.++.|+|||||.++++.... ..........+.+++.||+.++..
T Consensus 154 d~~~----~~-~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i 215 (233)
T 4df3_A 154 DVAQ----PE-QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVV 215 (233)
T ss_dssp CCCC----TT-HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred eccC----Ch-hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEE
Confidence 4222 22 36789999999999999999863221 111123445567888999988754
No 114
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.30 E-value=3.4e-11 Score=112.26 Aligned_cols=121 Identities=12% Similarity=0.083 Sum_probs=82.4
Q ss_pred cEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhH----HHHHHhcCCeeEEEcccccC----CCCCCceeEEEEccc
Q 043503 278 RIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPF----NSFIASRGLISMHISVSQRL----PFFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~----le~a~~rg~i~~~~~d~~~l----pf~d~sfDlV~~~~~ 347 (430)
.+|||+|||+|.++..+++.. .+|+++ |+++.| .+.++++..+.++.+|+... ++. ++||+|++. +
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gv--D~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~-~ 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAV--EYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQD-I 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEE--CCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEEC-C
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEE--ECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEe-c
Confidence 467999999999999998873 689988 677764 45555555677888887663 444 789999996 2
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeecc-ccC-cCcHHHH----HHHHHHcCCEEEEEEec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF-CFG-SQLNETY----VPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~-~~~-~~~~~~~----~~ll~~~Gfk~l~~~~~ 407 (430)
. .++ ....++.++.|+|||||+|++.... +.+ ....+++ .+.+++. |++++....
T Consensus 135 ~---~~~-~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 135 A---QKN-QIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp C---STT-HHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred c---Chh-HHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecC
Confidence 2 122 2456699999999999999987311 111 1111222 1236777 998876533
No 115
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.30 E-value=1.2e-11 Score=112.43 Aligned_cols=130 Identities=14% Similarity=0.087 Sum_probs=92.7
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCC-CCCCceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLP-FFENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lp-f~d~sfDlV~~~~ 346 (430)
.+|||+|||+|.++..++++ +.+|+++ |+++.+++.++++ | .+.++.+|+..++ +.+++||+|++..
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGF--DIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEE--CSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 35699999999999999987 2588888 7778888877665 3 3889999988876 6678999999975
Q ss_pred chhh-----cC-CchhHHHHHHHHHHhccCCcEEEEeeccccCcC--cHHHHHHHH---HHcCCEEEEEEeccc
Q 043503 347 VLSN-----WI-PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ--LNETYVPML---DRIGFKKLRWNVGMK 409 (430)
Q Consensus 347 ~L~~-----~~-~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~--~~~~~~~ll---~~~Gfk~l~~~~~~k 409 (430)
.+.. .. .......++.++.++|||||++++..+...... ....+...+ ...+|.+.++..-..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~ 175 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQ 175 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTC
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccC
Confidence 4411 01 111356799999999999999999865533221 122333333 446788888775544
No 116
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.30 E-value=1.2e-11 Score=120.59 Aligned_cols=97 Identities=13% Similarity=0.188 Sum_probs=77.9
Q ss_pred cEEEEEcCCccH----HHHHHHHc------CCEEEEEecCCChhHHHHHHhc----------------------------
Q 043503 278 RIGLDIGGGTGT----FAARMRER------NVTIITTSLNLDGPFNSFIASR---------------------------- 319 (430)
Q Consensus 278 r~VLDIGcGtG~----~a~~La~~------g~~Vv~vdiD~s~~~le~a~~r---------------------------- 319 (430)
.+|||+|||||. ++..+++. +.+|+++ |+++.|++.|+++
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~at--Dis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFAS--DIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEE--ESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEE--ECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 356999999997 66667665 3588888 7779999988763
Q ss_pred ---------CCeeEEEcccccCCCC-CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 320 ---------GLISMHISVSQRLPFF-ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 320 ---------g~i~~~~~d~~~lpf~-d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
..+.|.+.|....|++ +++||+|+|.+++.+ .++.....++.+++++|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliy-f~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIY-FDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGG-SCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHh-CCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1377888888776665 578999999999965 45555789999999999999999984
No 117
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.29 E-value=3.7e-12 Score=124.89 Aligned_cols=99 Identities=18% Similarity=0.174 Sum_probs=80.6
Q ss_pred cEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcC-------------CeeEEEcccccCC----CC--CC
Q 043503 278 RIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRG-------------LISMHISVSQRLP----FF--EN 337 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg-------------~i~~~~~d~~~lp----f~--d~ 337 (430)
.+|||+|||+|.++..+++. +.+++++ |+++.|++.++++. .+.++++|+..++ ++ ++
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKGRINKLVCT--DIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CEEEEECCCCcHHHHHHHhcCCCEEEEE--eCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 45799999999999999977 6688988 67788888876541 3788999998876 53 45
Q ss_pred ceeEEEEccchhhcC--CchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 338 TLDIVHSMHVLSNWI--PDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 338 sfDlV~~~~~L~~~~--~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
+||+|+|+.++ ||. +......++.++.++|||||+|+++.+
T Consensus 114 ~fD~V~~~~~l-~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQFVC-HYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEETCG-GGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEecch-hhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 99999999988 555 334467999999999999999998755
No 118
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.29 E-value=3.1e-11 Score=115.40 Aligned_cols=123 Identities=14% Similarity=0.104 Sum_probs=92.7
Q ss_pred ccEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCC--CCCCceeEEEEcc
Q 043503 277 IRIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLP--FFENTLDIVHSMH 346 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lp--f~d~sfDlV~~~~ 346 (430)
..+|||+|||+|.++..+++++. +|+++ |+++.+++.|+++ + .+.++.+|+..++ +++++||+|+++.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gv--Di~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGV--EIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEE--CCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEE--ECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 34579999999999999999854 88888 7778888777654 3 3889999988776 5578999999965
Q ss_pred chhhc-----------------CCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 347 VLSNW-----------------IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 347 ~L~~~-----------------~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.+... .....+..++..+.++|||||++++.. .......+...+.+.||...+..
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~----~~~~~~~~~~~l~~~~~~~~~~~ 199 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH----RPERLLDIIDIMRKYRLEPKRIQ 199 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE----CTTTHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE----cHHHHHHHHHHHHHCCCceEEEE
Confidence 44221 011235679999999999999999853 23345667788899999877655
No 119
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.29 E-value=2.8e-11 Score=123.21 Aligned_cols=99 Identities=19% Similarity=0.179 Sum_probs=81.3
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccCCCCCCceeEEEEccchhhc-
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRLPFFENTLDIVHSMHVLSNW- 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~- 351 (430)
.+|||+|||+|.++..+++++.+|+++ |+++.+++.++++ +. +.++.+|+...+.++++||+|+++..+++.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~~V~gv--Dis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~ 312 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGAEVVGV--EDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGG 312 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTCEEEEE--ESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTC
T ss_pred CEEEEEeeeCCHHHHHHHHcCCEEEEE--ECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcc
Confidence 456999999999999999999999998 5668888777654 43 789999998887777899999998777431
Q ss_pred -CCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 352 -IPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 352 -~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
........++.++.++|+|||.+++..
T Consensus 313 ~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 123457889999999999999999963
No 120
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.28 E-value=1.8e-11 Score=115.38 Aligned_cols=127 Identities=19% Similarity=0.206 Sum_probs=86.2
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCC-hhHHHHH---Hhc----CC--eeEEEcccccCCCC-CCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLD-GPFNSFI---ASR----GL--ISMHISVSQRLPFF-ENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s-~~~le~a---~~r----g~--i~~~~~d~~~lpf~-d~sfDlV~~ 344 (430)
.+|||||||+|.++..++++ +.+|+|+ |++ +.|++.| +++ +. +.+..+|++.+|.. .+.+|.|++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~Gv--D~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGI--DPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEE--CSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEE--eCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 45799999999999999965 7788888 777 6776665 432 33 78899999988732 256777776
Q ss_pred ccchh----hcCCchhHHHHHHHHHHhccCCcEEEEeeccccC-----------cC----c-H-HHHHHHHHHcCCEEEE
Q 043503 345 MHVLS----NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG-----------SQ----L-N-ETYVPMLDRIGFKKLR 403 (430)
Q Consensus 345 ~~~L~----~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~-----------~~----~-~-~~~~~ll~~~Gfk~l~ 403 (430)
+.... ++..+ ...++.++.|+|||||.|++...+... +. . . +++..+++++||.+..
T Consensus 104 ~~~~~~~~~~~~~~--~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~ 181 (225)
T 3p2e_A 104 LFPWGTLLEYVIKP--NRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDD 181 (225)
T ss_dssp ESCCHHHHHHHHTT--CHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEE
T ss_pred eCCCcHHhhhhhcc--hHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeee
Confidence 54321 11111 246899999999999999982211100 00 0 1 1378899999999887
Q ss_pred EEecc
Q 043503 404 WNVGM 408 (430)
Q Consensus 404 ~~~~~ 408 (430)
...-.
T Consensus 182 ~~~~~ 186 (225)
T 3p2e_A 182 VKELD 186 (225)
T ss_dssp EEEEC
T ss_pred eeecC
Confidence 66443
No 121
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.28 E-value=4.7e-12 Score=129.78 Aligned_cols=114 Identities=11% Similarity=0.117 Sum_probs=85.6
Q ss_pred HHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CC-EEEEEecCCChhHHHHHHh-----------c----CCeeEEE
Q 043503 264 GIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NV-TIITTSLNLDGPFNSFIAS-----------R----GLISMHI 326 (430)
Q Consensus 264 ~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~-----------r----g~i~~~~ 326 (430)
.+..++..+......+|||||||+|.++..++.. ++ +|+|+ |+++.+++.|++ . +.+.|++
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGI--DiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGV--EKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEE--ECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEE--eCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 3555555443334456799999999999999865 66 48988 666776665543 1 3489999
Q ss_pred cccccCCCCC--CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC
Q 043503 327 SVSQRLPFFE--NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG 383 (430)
Q Consensus 327 ~d~~~lpf~d--~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~ 383 (430)
+|+..+++.+ ..||+|+++..+ + .++ ....|.++.|+|||||.|++.++++..
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~-F-~pd--l~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA-F-GPE--VDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT-C-CHH--HHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred CcccCCccccccCCccEEEEcccc-c-Cch--HHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 9999888754 479999997665 2 333 788899999999999999999887654
No 122
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.27 E-value=4.5e-11 Score=115.31 Aligned_cols=140 Identities=17% Similarity=0.150 Sum_probs=100.5
Q ss_pred cCCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C--CeeEEEcc
Q 043503 257 DNGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G--LISMHISV 328 (430)
Q Consensus 257 ~~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d 328 (430)
++......++.++...+ ....+|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++.+|
T Consensus 91 pr~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~v--D~s~~~l~~a~~n~~~~~~~~v~~~~~d 167 (276)
T 2b3t_A 91 PRPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAV--DRMPDAVSLAQRNAQHLAIKNIHILQSD 167 (276)
T ss_dssp CCTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEE--CSSHHHHHHHHHHHHHHTCCSEEEECCS
T ss_pred cCchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCceEEEEcc
Confidence 34445555666666553 23346799999999999999976 6789988 7788888877655 4 38888888
Q ss_pred cccCCCCCCceeEEEEccchhh------------cCCc----------hhHHHHHHHHHHhccCCcEEEEeeccccCcCc
Q 043503 329 SQRLPFFENTLDIVHSMHVLSN------------WIPD----------SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQL 386 (430)
Q Consensus 329 ~~~lpf~d~sfDlV~~~~~L~~------------~~~d----------~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~ 386 (430)
+.. ++++++||+|+++..... +.|. .....++.++.++|+|||++++..- ...
T Consensus 168 ~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~----~~~ 242 (276)
T 2b3t_A 168 WFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG----WQQ 242 (276)
T ss_dssp TTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC----SSC
T ss_pred hhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC----chH
Confidence 765 244678999999743211 1221 2357899999999999999998642 233
Q ss_pred HHHHHHHHHHcCCEEEEE
Q 043503 387 NETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 387 ~~~~~~ll~~~Gfk~l~~ 404 (430)
.+.+.+++++.||+.+..
T Consensus 243 ~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 243 GEAVRQAFILAGYHDVET 260 (276)
T ss_dssp HHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHCCCcEEEE
Confidence 567888999999986543
No 123
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.27 E-value=7.3e-11 Score=112.44 Aligned_cols=124 Identities=15% Similarity=0.096 Sum_probs=85.5
Q ss_pred CccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhH----HHHHHhcCCeeEEEcccccCC---CCCCceeEEEEc
Q 043503 276 TIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPF----NSFIASRGLISMHISVSQRLP---FFENTLDIVHSM 345 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~----le~a~~rg~i~~~~~d~~~lp---f~d~sfDlV~~~ 345 (430)
...+|||+|||+|.++..+++. ..+|+++ |+++.| ++.++++..+.++++|+.... ...++||+|++.
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~av--D~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGV--EFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEE--ECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEE--ECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 3456799999999999999986 4589998 666765 355566667888999986543 124689999996
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc-c-----cCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF-C-----FGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~-~-----~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
... ++ ....++..+.++|||||+|+++-.. | ...+..+.....+++.||++++...
T Consensus 154 ~a~----~~-~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~ 215 (232)
T 3id6_C 154 IAQ----PD-QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIIN 215 (232)
T ss_dssp CCC----TT-HHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEE
T ss_pred CCC----hh-HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEec
Confidence 332 33 2344455667799999999986211 1 1122334566678888999887553
No 124
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.27 E-value=2.1e-11 Score=123.53 Aligned_cols=111 Identities=15% Similarity=0.229 Sum_probs=82.4
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----CC---eeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~lpf~d 336 (430)
.+.++.........+|||+|||+|.++..++++|. +|+++ |++ .|++.++++ +. +.++.+|++.++++
T Consensus 52 ~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gv--D~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 127 (376)
T 3r0q_C 52 FNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAV--EAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP- 127 (376)
T ss_dssp HHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEE--ESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-
T ss_pred HHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEE--ccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-
Confidence 33443333333345679999999999999999977 99999 455 666666543 33 89999999998876
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
++||+|++.........+..+..++.++.++|+|||+++++..
T Consensus 128 ~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 128 EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 8999999965443323334588899999999999999987543
No 125
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.27 E-value=9.6e-12 Score=116.78 Aligned_cols=119 Identities=18% Similarity=0.228 Sum_probs=85.2
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccC-C--CCCCceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRL-P--FFENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~l-p--f~d~sfDlV~~~~ 346 (430)
.+|||||||+|.++..+++. +..|+|+ |+++.+++.|+++ |. +.++.+|+..+ + +++++||.|++.+
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~~~v~gi--D~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPEQDFLGI--EVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTSEEEEE--CSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CeEEEEeeeChHHHHHHHHHCCCCeEEEE--EecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 45799999999999999987 5678988 7788888776654 43 88999998774 4 6789999999964
Q ss_pred chhhcCCchhH------HHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHH-cCCEEE
Q 043503 347 VLSNWIPDSML------EFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDR-IGFKKL 402 (430)
Q Consensus 347 ~L~~~~~d~~l------~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~-~Gfk~l 402 (430)
.. .|...... ..++.++.|+|||||+|++.+ ......+...+.+.. .+|+.+
T Consensus 114 ~~-p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t---d~~~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 114 PD-PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT---DWEPYAEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp CC-CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE---SCHHHHHHHHHHHHTSTTEEEC
T ss_pred CC-CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe---CCHHHHHHHHHHHHhCCCcccc
Confidence 43 33322111 259999999999999999864 222333444445554 346544
No 126
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.27 E-value=5.2e-11 Score=111.62 Aligned_cols=121 Identities=14% Similarity=0.158 Sum_probs=87.2
Q ss_pred ccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChh----HHHHHHhcCCeeEEEccccc---CCCCCCceeEEEEcc
Q 043503 277 IRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGP----FNSFIASRGLISMHISVSQR---LPFFENTLDIVHSMH 346 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~----~le~a~~rg~i~~~~~d~~~---lpf~d~sfDlV~~~~ 346 (430)
..+|||+|||+|.++..++++ +.+|+++ |+++. +.+.++.+..+.++.+|+.. +++.+++||+|++..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gv--D~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAV--EFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEE--CCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEE--ECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 346799999999999999987 3789988 66755 45566666668899999876 455678999999953
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc-C--cC----cHHHHHHHHHHcCCEEEEEE
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF-G--SQ----LNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~-~--~~----~~~~~~~ll~~~Gfk~l~~~ 405 (430)
. .++ ....++.++.++|||||+++++..... . .. ..++ .+++++.||+.++..
T Consensus 156 ~----~~~-~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 156 A----QPD-QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQL 215 (233)
T ss_dssp C----CTT-HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEEE
T ss_pred C----Ccc-HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEEEE
Confidence 3 222 245678899999999999999533210 0 01 1122 477888999988743
No 127
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.26 E-value=2.5e-11 Score=121.39 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=76.2
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc-------CCeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR-------GLISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r-------g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..++++|. +|+++|+ ++ |++.|+++ ..+.++.+|+..+++++++||+|++..+..
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~--s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQ--SE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEES--ST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEECh--HH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 4579999999999999999875 8999955 44 77666543 348999999999998889999999976322
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
.+.....+..++.++.|+|||||.++.
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 222333478899999999999999973
No 128
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.26 E-value=1.6e-11 Score=123.22 Aligned_cols=97 Identities=20% Similarity=0.303 Sum_probs=77.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----CC---eeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..+++++. +|+++|+ ++ +++.|+++ |. +.++.+|++.+++++++||+|++..+..
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~--s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIEC--SS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEEC--ST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECc--HH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 4569999999999999999965 9999955 43 77666543 33 8999999999999889999999965433
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
.......+..++.++.|+|||||+++..
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 3223334889999999999999998743
No 129
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.26 E-value=1.3e-11 Score=111.86 Aligned_cols=99 Identities=15% Similarity=0.138 Sum_probs=78.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCC--CCCCceeEEEEccch
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLP--FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lp--f~d~sfDlV~~~~~L 348 (430)
.+|||+|||+|.++..+++++. +|+++ |+++.+++.++++ + .+.++++|+..++ +++++||+|++...+
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAASVLFV--ESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEE--ECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCCCeEEEE--ECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 4569999999999998888864 78988 6678888777654 4 4889999987764 457899999998776
Q ss_pred hhcCCchhHHHHHHHHHH--hccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYR--LLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~R--vLrPGG~lvl~~f~ 380 (430)
++ . ......++.++.+ +|+|||.+++.+..
T Consensus 124 ~~-~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 124 NV-D-SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TS-C-HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred Cc-c-hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 32 2 1247889999999 99999999997644
No 130
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.26 E-value=3.6e-11 Score=113.53 Aligned_cols=116 Identities=12% Similarity=-0.016 Sum_probs=89.9
Q ss_pred CccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc-----C--CeeEEEcccccCCCCCCceeEEEEc
Q 043503 276 TIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR-----G--LISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r-----g--~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
...+|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.+..+|+...++++++||+|++.
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~--D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESY--EARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD 173 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEE--ESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEE--eCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC
Confidence 3346799999999999999988 6799988 6678888777655 3 4888999998887888899999983
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEE
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~ 404 (430)
.++ ...++.++.++|+|||++++.... ......+.+.+++.||..++.
T Consensus 174 ------~~~--~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~l~~~gf~~~~~ 221 (258)
T 2pwy_A 174 ------LME--PWKVLEKAALALKPDRFLVAYLPN---ITQVLELVRAAEAHPFRLERV 221 (258)
T ss_dssp ------SSC--GGGGHHHHHHHEEEEEEEEEEESC---HHHHHHHHHHHTTTTEEEEEE
T ss_pred ------CcC--HHHHHHHHHHhCCCCCEEEEEeCC---HHHHHHHHHHHHHCCCceEEE
Confidence 223 346899999999999999986533 122345666778899986543
No 131
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.25 E-value=1.4e-11 Score=108.02 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=84.6
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC--------CCCCceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP--------FFENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp--------f~d~sfDlV~~~~ 346 (430)
.+|||+|||+|.++..+++. +.+++++|++ + +.+. ..+.+..+|+...+ +++++||+|++..
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~--~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~ 96 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLL--P-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDM 96 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESS--C-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECc--c-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEEEECC
Confidence 45799999999999999987 4799999654 3 3322 44788899988876 6788999999977
Q ss_pred chhhcCCch---h------HHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 347 VLSNWIPDS---M------LEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 347 ~L~~~~~d~---~------l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.++ +.... . ...++.++.++|+|||.+++..+.. .....+.+.+... |+.+...
T Consensus 97 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~-~~~~~~~ 159 (180)
T 1ej0_A 97 APN-MSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG---EGFDEYLREIRSL-FTKVKVR 159 (180)
T ss_dssp CCC-CCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS---TTHHHHHHHHHHH-EEEEEEE
T ss_pred Ccc-ccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC---CcHHHHHHHHHHh-hhhEEee
Confidence 763 33321 0 1688999999999999999976542 2234455556654 7776654
No 132
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.25 E-value=3.2e-11 Score=118.61 Aligned_cols=123 Identities=16% Similarity=0.133 Sum_probs=86.1
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc-CCeeEE-EcccccCC---CCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR-GLISMH-ISVSQRLP---FFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r-g~i~~~-~~d~~~lp---f~d~sfDlV~~~~~L~~~ 351 (430)
++|||+|||||.++..++++|. +|+++ |+++.|++.+.++ ..+... ..+++.++ ++..+||+|++..++++
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aV--Dvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s- 163 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAV--DVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS- 163 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEE--CSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC-
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh-
Confidence 4679999999999999999975 89998 7778888775443 233222 23444433 34456999999766632
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEe---eccccCc------C---------cHHHHHHHHHHcCCEEEEEEecc
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLD---RFFCFGS------Q---------LNETYVPMLDRIGFKKLRWNVGM 408 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~---~f~~~~~------~---------~~~~~~~ll~~~Gfk~l~~~~~~ 408 (430)
+..+|.++.|+|+|||.+++. .|-.... . ..+.+..++..+||.+..+...+
T Consensus 164 -----l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~sp 233 (291)
T 3hp7_A 164 -----LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSP 233 (291)
T ss_dssp -----GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECS
T ss_pred -----HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
Confidence 456899999999999999885 2211100 0 12457778899999988876543
No 133
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.25 E-value=2.7e-11 Score=121.24 Aligned_cols=122 Identities=14% Similarity=0.147 Sum_probs=94.5
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
.+|||||||+|.++..++++ +.+++++ |+ +.+++.+++...+.++.+|+.. +++ .||+|++.+++++| ++.
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~-~d~ 267 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVF--DQ-PQVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDW-NDE 267 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEE--EC-HHHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGS-CHH
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEe--cc-HHHHhhcccCCCcEEEeCccCC-CCC--CceEEEEcccccCC-CHH
Confidence 56799999999999999988 5678877 55 5677666544448899999876 665 49999999999765 453
Q ss_pred hHHHHHHHHHHhccC---CcEEEEeeccccCcC-------------------------cHHHHHHHHHHcCCEEEEEEe
Q 043503 356 MLEFTLYDIYRLLRP---GGIFWLDRFFCFGSQ-------------------------LNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 356 ~l~~~L~ei~RvLrP---GG~lvl~~f~~~~~~-------------------------~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
....+|+++.++|+| ||++++.++...... ..++|.++++++||+.++...
T Consensus 268 ~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 268 QSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp HHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 456999999999999 999998776543211 235688899999999887653
No 134
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.24 E-value=2.7e-11 Score=132.68 Aligned_cols=97 Identities=13% Similarity=0.143 Sum_probs=82.6
Q ss_pred cEEEEEcCCccHHHHHHHHcC---CEEEEEecCCChhHHHHHHhc----------CC--eeEEEcccccCCCCCCceeEE
Q 043503 278 RIGLDIGGGTGTFAARMRERN---VTIITTSLNLDGPFNSFIASR----------GL--ISMHISVSQRLPFFENTLDIV 342 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g---~~Vv~vdiD~s~~~le~a~~r----------g~--i~~~~~d~~~lpf~d~sfDlV 342 (430)
.+|||||||+|.++..+++++ .+|+++ |+++.|++.|+++ +. +.++++|+..+++.+++||+|
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~p~a~VtGV--DIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPTSLQTIIGV--DISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCCCCCEEEEE--ESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCeEEEE--ECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 456999999999999999986 799998 7778999888762 32 899999999999999999999
Q ss_pred EEccchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 343 HSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 343 ~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
++..+++| +++.....++.++.|+|||| .++++.
T Consensus 801 V~~eVLeH-L~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 801 TCLEVIEH-MEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEESCGGG-SCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEeCchhh-CChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 99999966 56545667999999999999 777754
No 135
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.24 E-value=3.7e-11 Score=110.28 Aligned_cols=92 Identities=17% Similarity=0.114 Sum_probs=75.8
Q ss_pred CccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 276 TIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
...+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ + .+.++.+|....+..+++||+|++..++.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLVQHVCSV--ERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPP 154 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEE--ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEE--ecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchh
Confidence 34567999999999999999999999998 6678888877765 3 38899999877666678999999988885
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+ +++ ++.++|+|||++++..
T Consensus 155 ~-~~~--------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 155 E-IPT--------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp S-CCT--------HHHHTEEEEEEEEEEE
T ss_pred h-hhH--------HHHHhcccCcEEEEEE
Confidence 4 544 5789999999999864
No 136
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.24 E-value=3.4e-11 Score=114.33 Aligned_cols=119 Identities=18% Similarity=0.265 Sum_probs=84.0
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----------C--CeeEEEccccc-CC--CCCCcee
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----------G--LISMHISVSQR-LP--FFENTLD 340 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----------g--~i~~~~~d~~~-lp--f~d~sfD 340 (430)
.+|||||||+|.++..++++ +..|+|+ |+++.|++.|+++ + .+.++.+|+.. ++ +++++||
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~Gi--Dis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILGL--EIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEEE--ESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEEE--ECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 45799999999999999987 5788988 7788888776532 2 38899999876 66 7789999
Q ss_pred EEEEccchhhcCCch------hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcC-CEEE
Q 043503 341 IVHSMHVLSNWIPDS------MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIG-FKKL 402 (430)
Q Consensus 341 lV~~~~~L~~~~~d~------~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~G-fk~l 402 (430)
.|++...- .|.... ....++.++.++|||||.|++.... ........+.+...| |..+
T Consensus 126 ~v~~~~~d-p~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~---~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 126 KMFFLFPD-PHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV---LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEESC---HHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEeCCC-chhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC---HHHHHHHHHHHHHCCCcccc
Confidence 99985433 222100 0146999999999999999986422 223344455566666 5443
No 137
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.23 E-value=3.4e-11 Score=116.21 Aligned_cols=116 Identities=17% Similarity=0.086 Sum_probs=89.8
Q ss_pred CccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc-----C--CeeEEEcccccCCCCCCceeEEEEc
Q 043503 276 TIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR-----G--LISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r-----g--~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
...+|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++.+|+.. ++++++||+|++.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVV--ERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD 186 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEE--CSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEE--ECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc
Confidence 3356799999999999999987 6899988 7778888777654 3 38888898876 6677899999992
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.++ ...++.++.++|+|||++++.... ....+.+.+.+.+.||..++..
T Consensus 187 ------~~~--~~~~l~~~~~~LkpgG~l~i~~~~---~~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 187 ------IPD--PWNHVQKIASMMKPGSVATFYLPN---FDQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp ------CSC--GGGSHHHHHHTEEEEEEEEEEESS---HHHHHHHHHHSGGGTEEEEEEE
T ss_pred ------CcC--HHHHHHHHHHHcCCCCEEEEEeCC---HHHHHHHHHHHHHCCCeEEEEE
Confidence 233 457899999999999999997533 1123556677888999877654
No 138
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.23 E-value=4.1e-11 Score=114.74 Aligned_cols=120 Identities=15% Similarity=0.059 Sum_probs=90.1
Q ss_pred CccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccCCCC---CCceeEEEE
Q 043503 276 TIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRLPFF---ENTLDIVHS 344 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~lpf~---d~sfDlV~~ 344 (430)
...+|||||||+|..+..++.. +.+|+++ |+++.+++.++++ |. +.+++++++.++.. +++||+|++
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLV--DATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEE--ESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 3456799999999999999876 6789988 6778888777654 43 88999999887743 479999999
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
..+ .+ +..++..+.++|||||+|++..-. ...+....+...+...||+..+..
T Consensus 158 ~a~-----~~--~~~ll~~~~~~LkpgG~l~~~~g~-~~~~e~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 158 RAV-----AP--LCVLSELLLPFLEVGGAAVAMKGP-RVEEELAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp ESS-----CC--HHHHHHHHGGGEEEEEEEEEEECS-CCHHHHTTHHHHHHHHTEEEEEEE
T ss_pred CCc-----CC--HHHHHHHHHHHcCCCeEEEEEeCC-CcHHHHHHHHHHHHHcCCeEEEEE
Confidence 532 23 678999999999999999874311 011122446677888999877654
No 139
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.22 E-value=4.9e-11 Score=115.78 Aligned_cols=116 Identities=15% Similarity=0.140 Sum_probs=91.4
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----CC---eeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..+++.+. +|+++ |+++.+++.++++ +. +.++++|+..++. +++||+|++....
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~~V~~v--D~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAI--EKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVV- 202 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCEEEEE--CCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCS-
T ss_pred CEEEEecccCCHHHHHHHHhCCCEEEEE--ECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCch-
Confidence 3569999999999999999876 58888 7788888777654 33 7899999988776 7899999995332
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeecccc---CcCcHHHHHHHHHHcCCEEEE
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF---GSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~---~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
. ...++.++.++|+|||++++.++... .....+.+...+++.||+...
T Consensus 203 ----~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 203 ----R--THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----S--GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ----h--HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 1 35688999999999999999776532 133456788899999998765
No 140
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.22 E-value=5.7e-11 Score=120.59 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=84.5
Q ss_pred hhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C-----CeeEEEccc
Q 043503 261 LDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G-----LISMHISVS 329 (430)
Q Consensus 261 ~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g-----~i~~~~~d~ 329 (430)
.+.....++..++.....+|||+|||+|.++..++++ +.+|+++ |+++.+++.++++ | .+.++.+|+
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gv--D~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~ 284 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFV--DESPMAVASSRLNVETNMPEALDRCEFMINNA 284 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEE--ESCHHHHHHHHHHHHHHCGGGGGGEEEEECST
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEE--ECcHHHHHHHHHHHHHcCCCcCceEEEEechh
Confidence 3333344555555433356799999999999999998 6899998 6678888777654 4 267788888
Q ss_pred ccCCCCCCceeEEEEccchhh--cCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 330 QRLPFFENTLDIVHSMHVLSN--WIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 330 ~~lpf~d~sfDlV~~~~~L~~--~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.. ++++++||+|+++..+++ ++.+.....++.++.++|+|||.+++..
T Consensus 285 ~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 285 LS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 76 566789999999887743 2334345678999999999999999964
No 141
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.22 E-value=2e-11 Score=109.33 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=83.3
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC--CeeEEEcccccCCC---CCCceeEEEEccchhhcC
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG--LISMHISVSQRLPF---FENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg--~i~~~~~d~~~lpf---~d~sfDlV~~~~~L~~~~ 352 (430)
.+|||+|||. + .+|+++.|++.|+++. .+.++++|++.+++ ++++||+|+|+.++++ +
T Consensus 14 ~~vL~~~~g~--------------v--~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~-~ 76 (176)
T 2ld4_A 14 QFVAVVWDKS--------------S--PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGS-T 76 (176)
T ss_dssp SEEEEEECTT--------------S--CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTC-C
T ss_pred CEEEEecCCc--------------e--eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhh-c
Confidence 4569999996 1 2588899999998773 48999999999887 7899999999999954 5
Q ss_pred -CchhHHHHHHHHHHhccCCcEEEEeeccccCc------CcHHHHHHHHHHcCC
Q 043503 353 -PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS------QLNETYVPMLDRIGF 399 (430)
Q Consensus 353 -~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~------~~~~~~~~ll~~~Gf 399 (430)
++ ...++.+++|+|||||+|++.+...... ...+.+..+++++||
T Consensus 77 ~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 77 TLH--SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CCC--CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred ccC--HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 55 6889999999999999999976543211 124689999999999
No 142
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.21 E-value=4.2e-12 Score=115.76 Aligned_cols=138 Identities=12% Similarity=0.082 Sum_probs=84.0
Q ss_pred hhHHHHHHHccCCC-CCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C-CeeEEEcccccC
Q 043503 261 LDYGIDQVLSMKPL-GTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G-LISMHISVSQRL 332 (430)
Q Consensus 261 ~~~~id~lL~~~p~-~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~l 332 (430)
....++.++..++. ....+|||+|||+|.++..+++. +.+++++ |+++.+++.++++ + .+.++++|+..
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~- 90 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAV--DLSMDALAVARRNAERFGAVVDWAAADGIE- 90 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEE--ECC-------------------CCHHHHHH-
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEE--ECCHHHHHHHHHHHHHhCCceEEEEcchHh-
Confidence 33445555544332 33456799999999999999998 5688988 5667777777654 2 26677777766
Q ss_pred CCCC-----CceeEEEEccchhh------cCCc-----------------hhHHHHHHHHHHhccCCcE-EEEeeccccC
Q 043503 333 PFFE-----NTLDIVHSMHVLSN------WIPD-----------------SMLEFTLYDIYRLLRPGGI-FWLDRFFCFG 383 (430)
Q Consensus 333 pf~d-----~sfDlV~~~~~L~~------~~~d-----------------~~l~~~L~ei~RvLrPGG~-lvl~~f~~~~ 383 (430)
++++ ++||+|+++..+.. +.+. .....++.++.++|||||+ +++.. .
T Consensus 91 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-~--- 166 (215)
T 4dzr_A 91 WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV-G--- 166 (215)
T ss_dssp HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC-T---
T ss_pred hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE-C---
Confidence 5555 89999999644321 0010 0016789999999999999 55532 1
Q ss_pred cCcHHHHHHHHH--HcCCEEEEEE
Q 043503 384 SQLNETYVPMLD--RIGFKKLRWN 405 (430)
Q Consensus 384 ~~~~~~~~~ll~--~~Gfk~l~~~ 405 (430)
....+.+.+++. +.||..+...
T Consensus 167 ~~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 167 HNQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp TSCHHHHHHHTGGGGGGTEECCEE
T ss_pred CccHHHHHHHHHHhhcCCceEEEE
Confidence 233567788888 8999766543
No 143
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.20 E-value=2.3e-11 Score=116.05 Aligned_cols=91 Identities=21% Similarity=0.327 Sum_probs=77.6
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCC-eeEEEcccccCCCCCCceeEEEEccchhhcCCc
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASRGL-ISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
.+|||+|||+|.++..+++. +.+|+++ |+++.+++.+++++. +.+..+|+..+++++++||+|++..+.
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~------ 158 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEITTFGL--DVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP------ 158 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTSEEEEE--ESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC------
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCeEEEE--eCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh------
Confidence 45799999999999999997 7899988 778999999988754 788999999999989999999985432
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+.++.|+|||||.+++..+.
T Consensus 159 ----~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 159 ----CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp ----CCHHHHHHHEEEEEEEEEEEEC
T ss_pred ----hhHHHHHHhcCCCcEEEEEEcC
Confidence 1478999999999999987644
No 144
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.20 E-value=5.6e-11 Score=117.10 Aligned_cols=91 Identities=9% Similarity=0.106 Sum_probs=73.7
Q ss_pred cEEEEEcCCccHHHHH-HHHc-CCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAAR-MRER-NVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~-La~~-g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||||||+|.++.. +++. +.+|+++ |+++.|++.|+++ | .+.++++|+..++ +++||+|++...
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gI--Dis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVV--EIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL-- 197 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEE--ESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT--
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEE--ECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC--
Confidence 4569999999977654 4543 8999998 6678999888765 4 3899999998876 789999998533
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.++ ...++.++.|+|||||.+++..
T Consensus 198 --~~d--~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 198 --AEP--KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp --CSC--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred --ccC--HHHHHHHHHHHcCCCcEEEEEc
Confidence 344 7889999999999999999865
No 145
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.19 E-value=4e-11 Score=119.72 Aligned_cols=97 Identities=14% Similarity=0.190 Sum_probs=75.2
Q ss_pred cEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++..+++++ .+|+++ |+++.+++.++++ +. +.++.+|....+ +++||+|+++..+++
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~v--D~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLC--DVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFHD 273 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEE--ESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCCS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCccc
Confidence 346999999999999999885 588888 6678888777654 33 567777776543 779999999888743
Q ss_pred cC--CchhHHHHHHHHHHhccCCcEEEEee
Q 043503 351 WI--PDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 351 ~~--~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.. .......++.++.|+|||||.+++..
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 11 12246789999999999999999864
No 146
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.18 E-value=9.1e-11 Score=111.01 Aligned_cols=115 Identities=17% Similarity=0.194 Sum_probs=88.8
Q ss_pred CccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEc
Q 043503 276 TIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
...+|||+|||+|.++..+++. +.+|+++ |+++.+++.|+++ | .+.++.+|+... +++++||+|++.
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~--D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~ 169 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSY--EIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILD 169 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEE--CSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEEC
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEE--ecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEEC
Confidence 3346799999999999999998 6889988 7778888887765 3 288899988753 678899999983
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcC--CEEEEE
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIG--FKKLRW 404 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~G--fk~l~~ 404 (430)
.++ ...++.++.++|+|||.+++.... ......+.+.+++.| |..++.
T Consensus 170 ------~~~--~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 170 ------LPQ--PERVVEHAAKALKPGGFFVAYTPC---SNQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp ------SSC--GGGGHHHHHHHEEEEEEEEEEESS---HHHHHHHHHHHHHTGGGBSCCEE
T ss_pred ------CCC--HHHHHHHHHHHcCCCCEEEEEECC---HHHHHHHHHHHHHcCCCccccEE
Confidence 222 356899999999999999986533 223456777888999 875543
No 147
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.18 E-value=4.9e-11 Score=109.95 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=75.4
Q ss_pred cEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc----C----CeeEEEcccccCCC--CCCc-eeEEEEc
Q 043503 278 RIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR----G----LISMHISVSQRLPF--FENT-LDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r----g----~i~~~~~d~~~lpf--~d~s-fDlV~~~ 345 (430)
.+|||+|||+|.++..++.++ .+|+++ |+++.+++.|+++ + .+.++.+|+..+.. ++++ ||+|++.
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFL--ELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEE--ECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 346999999999999988886 488888 7788888887764 3 47889998766532 3678 9999997
Q ss_pred cchhhcCCchhHHHHHHHH--HHhccCCcEEEEeecc
Q 043503 346 HVLSNWIPDSMLEFTLYDI--YRLLRPGGIFWLDRFF 380 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei--~RvLrPGG~lvl~~f~ 380 (430)
..+ + .. ....++..+ .|+|+|||.+++....
T Consensus 133 ~~~-~-~~--~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 133 PPF-H-FN--LAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CCS-S-SC--HHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CCC-C-Cc--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 664 2 22 367788888 6789999999987543
No 148
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.16 E-value=9.5e-11 Score=116.46 Aligned_cols=96 Identities=21% Similarity=0.292 Sum_probs=76.3
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..++++|. +|+++|+ + ++++.|+++ + .+.++.+|+..+++++++||+|++.....
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~--s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDM--S-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEES--S-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEECh--H-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 3569999999999999999875 8999955 4 366665543 3 38899999999888888999999975543
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
.......+..++.++.|+|+|||.++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 333344578899999999999999974
No 149
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.16 E-value=9.2e-11 Score=109.21 Aligned_cols=91 Identities=19% Similarity=0.215 Sum_probs=74.2
Q ss_pred ccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCCCceeEEEEccchhhcC
Q 043503 277 IRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~ 352 (430)
..+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ +.+.++.+|+......+++||+|++..++++ +
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~-~ 147 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIVDKVVSV--EINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPT-L 147 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEE--ESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSS-C
T ss_pred CCEEEEEcCCCCHHHHHHHHHcCEEEEE--eCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHH-H
Confidence 3467999999999999999998899988 6678888888766 2588899988763334678999999988854 4
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEee
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+ .++.++|+|||++++..
T Consensus 148 ~--------~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 148 L--------CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp C--------HHHHHTEEEEEEEEEEE
T ss_pred H--------HHHHHHcCCCcEEEEEE
Confidence 3 36889999999999874
No 150
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.16 E-value=5.9e-11 Score=106.00 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=74.4
Q ss_pred cEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc----C---CeeEEEccccc-CCCCCCceeEEEEccch
Q 043503 278 RIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR----G---LISMHISVSQR-LPFFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~-lpf~d~sfDlV~~~~~L 348 (430)
.+|||+|||+|.++..+++++ .+|+++ |+++.+++.++++ + .+.++.+|+.. ++..+++||+|++...+
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGMSAAVLV--EKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCCEEEEE--CCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 457999999999999999985 588988 7778888877654 3 37888888766 44445679999997655
Q ss_pred hhcCCchhHHHHHHHHH--HhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIY--RLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~--RvLrPGG~lvl~~f~ 380 (430)
.. ......+..+. ++|+|||++++....
T Consensus 111 ~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 111 AK----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HH----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred Cc----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 21 12456677776 999999999997644
No 151
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.16 E-value=9.9e-11 Score=106.98 Aligned_cols=112 Identities=16% Similarity=0.090 Sum_probs=84.5
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..++.. +.+++++ |+++.+++.++++ +. +.++.+|+..++ ++++||+|++.. +
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLL--DSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-F- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEE--ESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC-S-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEE--eCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec-c-
Confidence 35699999999999999987 6799988 6678888777654 33 888999988766 567899999843 2
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.+ ...++.++.++|+|||++++..- ....+.+..++. ||+.++..
T Consensus 142 ---~~--~~~~l~~~~~~L~~gG~l~~~~~----~~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 142 ---AS--LNDMVSWCHHLPGEQGRFYALKG----QMPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp ---SS--HHHHHHHHTTSEEEEEEEEEEES----SCCHHHHHTSCT--TEEEEEEE
T ss_pred ---CC--HHHHHHHHHHhcCCCcEEEEEeC----CCchHHHHHHhc--CCceeeee
Confidence 22 67899999999999999998642 222344544444 89877643
No 152
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.16 E-value=4e-12 Score=119.40 Aligned_cols=120 Identities=13% Similarity=0.057 Sum_probs=87.5
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ | .+.++++|+..++ ++++||+|+++..+++
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGMRVIAI--DIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSS
T ss_pred CEEEECccccCHHHHHHHHcCCEEEEE--ECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCC
Confidence 346999999999999999999999998 6678888777654 4 4889999988876 6789999999877744
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeecccc---------CcCcHHHHHHHHHHcCCEEEE
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF---------GSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~---------~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
..+ ....+.++.++|+|||.+++...... .....+.+..++...|.-.+.
T Consensus 157 -~~~--~~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~ 215 (241)
T 3gdh_A 157 -PDY--ATAETFDIRTMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIE 215 (241)
T ss_dssp -GGG--GGSSSBCTTTSCSSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEE
T ss_pred -cch--hhhHHHHHHhhcCCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEE
Confidence 333 33467789999999999776542111 111335566666666655444
No 153
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.15 E-value=1.6e-10 Score=109.61 Aligned_cols=114 Identities=11% Similarity=-0.006 Sum_probs=81.0
Q ss_pred HHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc----CCEEEEEecCCChhHHHHHHhc---C----C----------
Q 043503 263 YGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER----NVTIITTSLNLDGPFNSFIASR---G----L---------- 321 (430)
Q Consensus 263 ~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~----g~~Vv~vdiD~s~~~le~a~~r---g----~---------- 321 (430)
..++.++...+.....+|||+|||+|.++..++++ +.+|+++ |+++.+++.|+++ . .
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gv--Dis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~ 115 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIAS--DVDPAPLELAAKNLALLSPAGLTARELERREQ 115 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEE--ESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEE--ECCHHHHHHHHHHHHHhhhccccccchhhhhh
Confidence 34555555444333356799999999999999886 5688888 6678888777643 1 1
Q ss_pred ------------------ee-------------EEEcccccCCC-----CCCceeEEEEccchhhcCC------chhHHH
Q 043503 322 ------------------IS-------------MHISVSQRLPF-----FENTLDIVHSMHVLSNWIP------DSMLEF 359 (430)
Q Consensus 322 ------------------i~-------------~~~~d~~~lpf-----~d~sfDlV~~~~~L~~~~~------d~~l~~ 359 (430)
+. +..+|+..... ..++||+|+|+..+..... ......
T Consensus 116 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~ 195 (250)
T 1o9g_A 116 SERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAG 195 (250)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHH
T ss_pred hhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHH
Confidence 45 88888765321 3458999999876643221 134668
Q ss_pred HHHHHHHhccCCcEEEEee
Q 043503 360 TLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 360 ~L~ei~RvLrPGG~lvl~~ 378 (430)
++.++.++|+|||++++..
T Consensus 196 ~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 196 LLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEeC
Confidence 9999999999999999843
No 154
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.14 E-value=1.2e-10 Score=114.72 Aligned_cols=126 Identities=21% Similarity=0.204 Sum_probs=89.8
Q ss_pred ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----------CCeeEEEcccccCCC--CCCceeEE
Q 043503 277 IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----------GLISMHISVSQRLPF--FENTLDIV 342 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~lpf--~d~sfDlV 342 (430)
.++|||||||+|.++..+++. ..+|+++ |+++.+++.++++ ..+.++.+|+..++. ++++||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v--Did~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLV--DIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEE--ESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 356799999999999999987 4688888 6668888877654 238899999877653 47899999
Q ss_pred EEccchhhcCCchhH--HHHHHHHHHhccCCcEEEEeeccc-cCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 343 HSMHVLSNWIPDSML--EFTLYDIYRLLRPGGIFWLDRFFC-FGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 343 ~~~~~L~~~~~d~~l--~~~L~ei~RvLrPGG~lvl~~f~~-~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
++.... ++.+...+ ..++.++.|+|+|||++++..... ......+.+.+.+++.||..++..
T Consensus 174 i~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 174 IIDTTD-PAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EECCCC-ccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEE
Confidence 996544 32222112 578999999999999999863221 111234668888999999876544
No 155
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.14 E-value=2.1e-10 Score=109.99 Aligned_cols=124 Identities=15% Similarity=0.099 Sum_probs=88.4
Q ss_pred HHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc-----C----CeeEEEcccccCCC
Q 043503 267 QVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR-----G----LISMHISVSQRLPF 334 (430)
Q Consensus 267 ~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r-----g----~i~~~~~d~~~lpf 334 (430)
.++.........+|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++.+|+...++
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISY--EQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEE--CSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEE--eCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 3333333333345799999999999999986 6789988 7778888777654 4 48889999988888
Q ss_pred CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHH-cCCEEEE
Q 043503 335 FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDR-IGFKKLR 403 (430)
Q Consensus 335 ~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~-~Gfk~l~ 403 (430)
++++||+|++. .++ ...++.++.++|+|||++++..... +........+.+ .+|...+
T Consensus 168 ~~~~~D~v~~~------~~~--~~~~l~~~~~~L~pgG~l~~~~~~~---~~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 168 PDGSVDRAVLD------MLA--PWEVLDAVSRLLVAGGVLMVYVATV---TQLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp CTTCEEEEEEE------SSC--GGGGHHHHHHHEEEEEEEEEEESSH---HHHHHHHHHHHHHSSBCCCE
T ss_pred CCCceeEEEEC------CcC--HHHHHHHHHHhCCCCCEEEEEeCCH---HHHHHHHHHHHhcCCcCCcE
Confidence 78899999993 222 3468999999999999999865331 122333444444 7776443
No 156
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.14 E-value=3e-10 Score=103.27 Aligned_cols=116 Identities=16% Similarity=0.175 Sum_probs=79.9
Q ss_pred cEEEEEcCCccHHHHHHHHc----CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC--------------------
Q 043503 278 RIGLDIGGGTGTFAARMRER----NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP-------------------- 333 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~----g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp-------------------- 333 (430)
.+|||+|||+|.++..++++ +.+|+++|++... ....+.++++|+...+
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~ 96 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDY 96 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-------CCTTCEEEECCTTTTSSCCC-----------CHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-------CCCCceEEEccccchhhhhhccccccccccchhhHH
Confidence 45799999999999999987 3689999665421 1123688889887766
Q ss_pred -----CCCCceeEEEEccchhhcCC----ch-----hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCC
Q 043503 334 -----FFENTLDIVHSMHVLSNWIP----DS-----MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGF 399 (430)
Q Consensus 334 -----f~d~sfDlV~~~~~L~~~~~----d~-----~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gf 399 (430)
+++++||+|++...+ ++.. +. ....++.++.++|||||.|++..+.. .....+...+.. .|
T Consensus 97 ~~~~~~~~~~fD~v~~~~~~-~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~---~~~~~l~~~l~~-~f 171 (201)
T 2plw_A 97 KLKEILQDKKIDIILSDAAV-PCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG---SQTNNLKTYLKG-MF 171 (201)
T ss_dssp HHHHHHTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS---TTHHHHHHHHHT-TE
T ss_pred HHHhhcCCCcccEEEeCCCc-CCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC---CCHHHHHHHHHH-HH
Confidence 567899999997655 3321 10 11247899999999999999865432 223445555554 47
Q ss_pred EEEEEE
Q 043503 400 KKLRWN 405 (430)
Q Consensus 400 k~l~~~ 405 (430)
..+...
T Consensus 172 ~~v~~~ 177 (201)
T 2plw_A 172 QLVHTT 177 (201)
T ss_dssp EEEEEC
T ss_pred heEEEE
Confidence 666543
No 157
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.14 E-value=3.3e-10 Score=108.78 Aligned_cols=123 Identities=12% Similarity=0.074 Sum_probs=87.0
Q ss_pred CccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc-------C---CeeEEEcccccC-------CCCC
Q 043503 276 TIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR-------G---LISMHISVSQRL-------PFFE 336 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r-------g---~i~~~~~d~~~l-------pf~d 336 (430)
...+|||+|||+|.++..++++ +.+|+++ |+++.+++.|+++ + .+.++.+|+..+ ++++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gv--Di~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLY--ERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEE--ESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEE--ECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 3356799999999999999988 4688888 6678888887754 2 278899998776 3567
Q ss_pred CceeEEEEccchhhc---------------CCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEE
Q 043503 337 NTLDIVHSMHVLSNW---------------IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKK 401 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~---------------~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~ 401 (430)
++||+|+++..+... .....+..++..+.++|+|||+|++.... .....+...+.+. |..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP----QSVAEIIAACGSR-FGG 188 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG----GGHHHHHHHHTTT-EEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH----HHHHHHHHHHHhc-CCc
Confidence 899999997433211 11123678999999999999999985422 2334566666654 665
Q ss_pred EEEE
Q 043503 402 LRWN 405 (430)
Q Consensus 402 l~~~ 405 (430)
.+..
T Consensus 189 ~~i~ 192 (260)
T 2ozv_A 189 LEIT 192 (260)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5433
No 158
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.13 E-value=1.2e-10 Score=109.51 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=81.4
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C----CeeEEEcccccC-
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G----LISMHISVSQRL- 332 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g----~i~~~~~d~~~l- 332 (430)
+..+....+.....+|||||||+|..+..+++. +.+|+++ |+++.+++.|+++ | .+.++.+|+..+
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCI--DPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEE--CSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 444444444432236799999999999999985 6789988 7778888777654 2 478888887553
Q ss_pred C-CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc
Q 043503 333 P-FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF 382 (430)
Q Consensus 333 p-f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~ 382 (430)
+ +++++||+|++.... . ....++.++.++|||||++++++.+..
T Consensus 123 ~~~~~~~fD~V~~d~~~----~--~~~~~l~~~~~~LkpGG~lv~dn~~~~ 167 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVSP----M--DLKALVDAAWPLLRRGGALVLADALLD 167 (221)
T ss_dssp GGSCTTCEEEEEECCCT----T--THHHHHHHHHHHEEEEEEEEETTTTGG
T ss_pred HHhcCCCcCeEEEcCcH----H--HHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 3 347899999985332 2 256789999999999999999876653
No 159
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.13 E-value=1.6e-10 Score=115.71 Aligned_cols=95 Identities=15% Similarity=0.191 Sum_probs=75.2
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||||||+|.++..+++++. +|+++|+ ++ +.+.++++ | .+.++.+|.+.++++ ++||+|++...+.
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~--s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEA--ST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEEC--ST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBT
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECC--HH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchh
Confidence 4579999999999999999864 9999955 44 55555543 3 389999999888765 5899999987776
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
++..+ .....+.++.++|+|||.+++.
T Consensus 128 ~~~~~-~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNE-RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTT-SHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChH-HHHHHHHHHHhhcCCCeEEEEe
Confidence 65544 3667888999999999999854
No 160
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.13 E-value=3.8e-10 Score=111.60 Aligned_cols=142 Identities=15% Similarity=0.092 Sum_probs=98.1
Q ss_pred CCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC--eeEEEcc
Q 043503 258 NGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL--ISMHISV 328 (430)
Q Consensus 258 ~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d 328 (430)
+......+..++...++. +|||+|||+|..+..+++. +.+|+++ |+++.+++.++++ |. +.++.+|
T Consensus 103 qd~~s~l~~~~l~~~~g~---~VLDlg~G~G~~t~~la~~~~~~~~v~av--D~s~~~l~~a~~~~~~~g~~~v~~~~~D 177 (315)
T 1ixk_A 103 QEASSMYPPVALDPKPGE---IVADMAAAPGGKTSYLAQLMRNDGVIYAF--DVDENRLRETRLNLSRLGVLNVILFHSS 177 (315)
T ss_dssp CCHHHHHHHHHHCCCTTC---EEEECCSSCSHHHHHHHHHTTTCSEEEEE--CSCHHHHHHHHHHHHHHTCCSEEEESSC
T ss_pred eCHHHHHHHHHhCCCCCC---EEEEeCCCCCHHHHHHHHHhCCCCEEEEE--cCCHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 333344445555554443 4699999999999999986 3688888 7778888777654 43 7888899
Q ss_pred cccCCCCCCceeEEEEccc------hhhcCCc--------------hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHH
Q 043503 329 SQRLPFFENTLDIVHSMHV------LSNWIPD--------------SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNE 388 (430)
Q Consensus 329 ~~~lpf~d~sfDlV~~~~~------L~~~~~d--------------~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~ 388 (430)
+..++..+++||+|++... +.+ .++ .....+|.++.++|||||++++++......+-..
T Consensus 178 ~~~~~~~~~~fD~Il~d~Pcsg~g~~~~-~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~ 256 (315)
T 1ixk_A 178 SLHIGELNVEFDKILLDAPCTGSGTIHK-NPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEF 256 (315)
T ss_dssp GGGGGGGCCCEEEEEEECCTTSTTTCC---------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHH
T ss_pred hhhcccccccCCEEEEeCCCCCcccccC-ChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHH
Confidence 8887755678999998421 211 111 0125799999999999999999764333333345
Q ss_pred HHHHHHHHcCCEEEEEE
Q 043503 389 TYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 389 ~~~~ll~~~Gfk~l~~~ 405 (430)
.+..++++.||+.+.+.
T Consensus 257 ~v~~~l~~~~~~~~~~~ 273 (315)
T 1ixk_A 257 VIQWALDNFDVELLPLK 273 (315)
T ss_dssp HHHHHHHHSSEEEECCC
T ss_pred HHHHHHhcCCCEEecCC
Confidence 56778888998876543
No 161
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.12 E-value=3.6e-10 Score=108.87 Aligned_cols=115 Identities=17% Similarity=0.189 Sum_probs=88.0
Q ss_pred ccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEcc
Q 043503 277 IRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMH 346 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~ 346 (430)
..+|||+|||+|.++..++++ +.+|+++ |+++.+++.++++ + .+.++.+|+... +++++||+|++.
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~- 188 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAY--EKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLD- 188 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEE--CCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC-
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEE--ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC-
Confidence 346799999999999999987 5788888 7778888877765 4 378888888765 667889999983
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.++ ...++.++.++|+|||.+++.... ......+.+.+.+.||..++..
T Consensus 189 -----~~~--~~~~l~~~~~~L~pgG~l~~~~~~---~~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 189 -----VPD--PWNYIDKCWEALKGGGRFATVCPT---TNQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp -----CSC--GGGTHHHHHHHEEEEEEEEEEESS---HHHHHHHHHHHHHSSEEEEEEE
T ss_pred -----CcC--HHHHHHHHHHHcCCCCEEEEEeCC---HHHHHHHHHHHHHCCCceeEEE
Confidence 223 346899999999999999987532 1123456677888999877644
No 162
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.12 E-value=4e-10 Score=109.39 Aligned_cols=122 Identities=12% Similarity=0.099 Sum_probs=84.7
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCC-ChhHHHHHHhcC----------------CeeEEEcccccCC--C---
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNL-DGPFNSFIASRG----------------LISMHISVSQRLP--F--- 334 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~-s~~~le~a~~rg----------------~i~~~~~d~~~lp--f--- 334 (430)
.+|||+|||+|.++..++..+. +|+++ |+ ++.+++.++++- .+.+...+..... +
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~--D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVAT--DYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEE--ECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEE--eCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 4579999999999999999876 89988 66 577777665431 3455544432211 1
Q ss_pred -CCCceeEEEEccchhhcCCchhHHHHHHHHHHhcc---C--CcEEEEeeccccCc---CcHHHHHHHHHHcC-CEEEEE
Q 043503 335 -FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLR---P--GGIFWLDRFFCFGS---QLNETYVPMLDRIG-FKKLRW 404 (430)
Q Consensus 335 -~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLr---P--GG~lvl~~f~~~~~---~~~~~~~~ll~~~G-fk~l~~ 404 (430)
++++||+|+++.++.+ .++ ...++..+.++|+ | ||.+++.. ..... .....+.+.+++.| |++.+.
T Consensus 159 ~~~~~fD~Ii~~dvl~~-~~~--~~~ll~~l~~~Lk~~~p~~gG~l~v~~-~~~~~~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSF-HQA--HDALLRSVKMLLALPANDPTAVALVTF-THHRPHLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp HSCSSBSEEEEESCCSC-GGG--HHHHHHHHHHHBCCTTTCTTCEEEEEE-CC--------CTHHHHHHHHSTTEEEEEE
T ss_pred ccCCCCCEEEEeCcccC-hHH--HHHHHHHHHHHhcccCCCCCCEEEEEE-EeeecccchhHHHHHHHHHhcCCEEEEEe
Confidence 3678999999888854 333 7889999999999 9 99877631 11111 11244666788999 998876
Q ss_pred E
Q 043503 405 N 405 (430)
Q Consensus 405 ~ 405 (430)
.
T Consensus 235 ~ 235 (281)
T 3bzb_A 235 L 235 (281)
T ss_dssp E
T ss_pred c
Confidence 3
No 163
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.11 E-value=1.6e-10 Score=108.77 Aligned_cols=98 Identities=11% Similarity=0.146 Sum_probs=77.1
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEccccc-CC-CCCCceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQR-LP-FFENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~-lp-f~d~sfDlV~~~~ 346 (430)
.+|||+|||+|.++..+++. +.+|+++ |+++.+++.|+++ + .+.++.+|+.. ++ ..+++||+|++..
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASISDDIHVTTI--ERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTCTTCEEEEE--ECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CEEEEEeCchhHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 45699999999999999984 7899988 6678888777654 3 48999999865 34 3478999999853
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG 383 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~ 383 (430)
. ... ...++.++.++|||||++++++.+..+
T Consensus 151 ~----~~~--~~~~l~~~~~~LkpgG~lv~d~~~~~g 181 (232)
T 3ntv_A 151 A----KAQ--SKKFFEIYTPLLKHQGLVITDNVLYHG 181 (232)
T ss_dssp T----SSS--HHHHHHHHGGGEEEEEEEEEECTTGGG
T ss_pred c----HHH--HHHHHHHHHHhcCCCeEEEEeeCCcCc
Confidence 2 222 678999999999999999997766543
No 164
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.11 E-value=2.4e-10 Score=108.77 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=76.3
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C---CeeEEEccccc-CCCC--CCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQR-LPFF--ENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~-lpf~--d~sfDlV~~ 344 (430)
++|||||||+|..+..+++. +.+|+++ |+++.+++.|+++ | .+.++.+|+.. ++.. .++||+|++
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTL--EADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEE--ECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 45699999999999999998 6799988 6678888877655 3 48899998765 4432 348999998
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF 382 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~ 382 (430)
.... . ....++.++.++|||||++++++.+..
T Consensus 143 d~~~----~--~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 143 DADK----P--NNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp CSCG----G--GHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred CCch----H--HHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 5432 2 256799999999999999999876654
No 165
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.10 E-value=1.8e-10 Score=103.05 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=73.6
Q ss_pred cEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccC----CCCCCceeEEEEc
Q 043503 278 RIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRL----PFFENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~l----pf~d~sfDlV~~~ 345 (430)
.+|||+|||+|.++..+++++ .+|+++ |+++.+++.++++ + .+.++.+|+... ++.+++||+|++.
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMDKSICI--EKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCCCEEEEE--ECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 467999999999999998885 689988 6668888777654 3 378999987653 2236889999998
Q ss_pred cchhhcCCchhHHHHHHHH--HHhccCCcEEEEeecc
Q 043503 346 HVLSNWIPDSMLEFTLYDI--YRLLRPGGIFWLDRFF 380 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei--~RvLrPGG~lvl~~f~ 380 (430)
..+.. .. ....+..+ .++|+|||++++....
T Consensus 124 ~~~~~--~~--~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 124 PPYAK--QE--IVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCGGG--CC--HHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCc--hh--HHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 76531 22 45667777 8999999999987543
No 166
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.10 E-value=2e-10 Score=112.07 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=77.5
Q ss_pred CCccEEEEEcCCc--cHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc------CCeeEEEcccccCC----CC--CC
Q 043503 275 GTIRIGLDIGGGT--GTFAARMRER---NVTIITTSLNLDGPFNSFIASR------GLISMHISVSQRLP----FF--EN 337 (430)
Q Consensus 275 ~~ir~VLDIGcGt--G~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r------g~i~~~~~d~~~lp----f~--d~ 337 (430)
..++.+||||||+ +.....++++ +.+|+++ |.++.|++.++++ +.+.++++|+..++ .+ .+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~V--D~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYV--DNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEE--ECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEE--eCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccc
Confidence 4567889999997 3344444443 7899998 7789999888765 23889999987752 11 34
Q ss_pred cee-----EEEEccchhhcCCchh-HHHHHHHHHHhccCCcEEEEeeccc
Q 043503 338 TLD-----IVHSMHVLSNWIPDSM-LEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 338 sfD-----lV~~~~~L~~~~~d~~-l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
+|| .|+++.+| ||+++.. ...++.++.++|+|||+|+++++..
T Consensus 155 ~~D~~~p~av~~~avL-H~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 155 TLDLTRPVALTVIAIV-HFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TCCTTSCCEEEEESCG-GGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred ccCcCCcchHHhhhhH-hcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 455 57777777 6787643 5789999999999999999998764
No 167
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.09 E-value=9.9e-11 Score=110.99 Aligned_cols=140 Identities=15% Similarity=0.167 Sum_probs=85.0
Q ss_pred HHHHHHccCCCC--CccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CC---eeEEEcccccC
Q 043503 264 GIDQVLSMKPLG--TIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRL 332 (430)
Q Consensus 264 ~id~lL~~~p~~--~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~l 332 (430)
.+..++...+.. ...+|||+|||+|.++..++++ +.+|+++ |+++.|++.|+++ +. +.++.+|+...
T Consensus 51 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gv--D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 128 (254)
T 2h00_A 51 WVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLAT--EVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL 128 (254)
T ss_dssp HHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS
T ss_pred HHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEE--ECCHHHHHHHHHHHHHcCCCccEEEEEcchhhh
Confidence 455555544321 2346799999999999999887 7899998 6678888877654 33 88999987652
Q ss_pred ---CCC---CCceeEEEEccchhhcCCc------------hhHHHHHHHHHHhccCCcEEEEeeccc-------------
Q 043503 333 ---PFF---ENTLDIVHSMHVLSNWIPD------------SMLEFTLYDIYRLLRPGGIFWLDRFFC------------- 381 (430)
Q Consensus 333 ---pf~---d~sfDlV~~~~~L~~~~~d------------~~l~~~L~ei~RvLrPGG~lvl~~f~~------------- 381 (430)
+++ +++||+|+++..+.+...+ .....++.++.|+|||||.+.+.+.+.
T Consensus 129 ~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~ 208 (254)
T 2h00_A 129 LMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWY 208 (254)
T ss_dssp STTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCE
T ss_pred hhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEE
Confidence 344 3689999997554321100 001234566777777776654321110
Q ss_pred ---cC-cCcHHHHHHHHHHcCCEEEEEE
Q 043503 382 ---FG-SQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 382 ---~~-~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.+ ....+.+.+++++.||+.++..
T Consensus 209 ~~~~~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 209 SCMLGKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp EEEESSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred EECCCChhHHHHHHHHHHHcCCCceEEE
Confidence 01 1122567788999999876543
No 168
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.09 E-value=2.2e-10 Score=105.57 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=75.3
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C--CeeEEEccccc-CCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G--LISMHISVSQR-LPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~-lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..++.++. +|+++ |+++.+++.++++ + .+.++++|+.. ++..+++||+|++...+
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~v--D~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~- 132 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLI--EMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF- 132 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS-
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEE--ECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC-
Confidence 3569999999999999888864 88888 7788988887654 3 48899999766 56667899999997664
Q ss_pred hcCCchhHHHHHHHHHH--hccCCcEEEEeecc
Q 043503 350 NWIPDSMLEFTLYDIYR--LLRPGGIFWLDRFF 380 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~R--vLrPGG~lvl~~f~ 380 (430)
+ .. ....++..+.+ +|+|||.++++...
T Consensus 133 ~-~~--~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-RG--LLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S-TT--THHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C-CC--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 2 22 25677888865 59999999987533
No 169
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.09 E-value=2.2e-10 Score=106.12 Aligned_cols=107 Identities=20% Similarity=0.234 Sum_probs=79.5
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccC-C
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRL-P 333 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~l-p 333 (430)
+..++...++. +|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++++|+... +
T Consensus 56 l~~l~~~~~~~---~vLdiG~G~G~~~~~la~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 130 (225)
T 3tr6_A 56 LALLVKLMQAK---KVIDIGTFTGYSAIAMGLALPKDGTLITC--DVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLA 130 (225)
T ss_dssp HHHHHHHHTCS---EEEEECCTTSHHHHHHHTTCCTTCEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred HHHHHHhhCCC---EEEEeCCcchHHHHHHHHhCCCCCEEEEE--eCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHH
Confidence 44444444443 4699999999999999987 6899988 6678888777654 3 388999887442 2
Q ss_pred -CCC----CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc
Q 043503 334 -FFE----NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF 382 (430)
Q Consensus 334 -f~d----~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~ 382 (430)
+.+ ++||+|++.... . ....++.++.++|||||++++++.+..
T Consensus 131 ~~~~~~~~~~fD~v~~~~~~----~--~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 131 ELIHAGQAWQYDLIYIDADK----A--NTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp HHHTTTCTTCEEEEEECSCG----G--GHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred HhhhccCCCCccEEEECCCH----H--HHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 111 789999974332 1 267899999999999999999877653
No 170
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.09 E-value=5.8e-10 Score=103.72 Aligned_cols=127 Identities=21% Similarity=0.342 Sum_probs=86.8
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC---eeEEEccccc-CC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQR-LP 333 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~-lp 333 (430)
+..++...++ ++|||+|||+|..+..+++. +.+|+++ |+++.+++.|+++ |. +.++.+|+.. ++
T Consensus 50 l~~l~~~~~~---~~vLdiG~G~G~~~~~la~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 50 MDAVIREYSP---SLVLELGAYCGYSAVRMARLLQPGARLLTM--EINPDCAAITQQMLNFAGLQDKVTILNGASQDLIP 124 (221)
T ss_dssp HHHHHHHHCC---SEEEEECCTTSHHHHHHHTTSCTTCEEEEE--ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGG
T ss_pred HHHHHHhcCC---CEEEEECCCCCHHHHHHHHhCCCCCEEEEE--eCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHH
Confidence 4444444443 45699999999999999985 6899988 6678888877664 43 8899998744 34
Q ss_pred CCC-----CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHH-HcCCEEEE
Q 043503 334 FFE-----NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLD-RIGFKKLR 403 (430)
Q Consensus 334 f~d-----~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~-~~Gfk~l~ 403 (430)
... ++||+|++.....++. + ...++..+ ++|||||++++++....+. +.+.+.+. .-+|....
T Consensus 125 ~~~~~~~~~~fD~V~~d~~~~~~~-~--~~~~~~~~-~~LkpgG~lv~~~~~~~~~---~~~~~~l~~~~~~~~~~ 193 (221)
T 3u81_A 125 QLKKKYDVDTLDMVFLDHWKDRYL-P--DTLLLEKC-GLLRKGTVLLADNVIVPGT---PDFLAYVRGSSSFECTH 193 (221)
T ss_dssp GTTTTSCCCCCSEEEECSCGGGHH-H--HHHHHHHT-TCCCTTCEEEESCCCCCCC---HHHHHHHHHCTTEEEEE
T ss_pred HHHHhcCCCceEEEEEcCCcccch-H--HHHHHHhc-cccCCCeEEEEeCCCCcch---HHHHHHHhhCCCceEEE
Confidence 222 7899999976664432 1 33566677 9999999999988664332 33334443 44565443
No 171
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.09 E-value=7.6e-10 Score=110.69 Aligned_cols=119 Identities=20% Similarity=0.123 Sum_probs=88.3
Q ss_pred cEEEEEcCCccHHHHHHHHcC---CEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccch
Q 043503 278 RIGLDIGGGTGTFAARMRERN---VTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g---~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L 348 (430)
..|||+|||+|+++..++..+ .+++++ |+++.+++.|+++ | .+.+.++|+..++.+.+.||+|+++..+
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~--Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPy 282 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLGPTSPVYAG--DLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPH 282 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHCTTSCEEEE--ESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCS
T ss_pred CEEEeCCCCcCHHHHHHHHhhCCCceEEEE--ECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCC
Confidence 456999999999999999874 889998 6668888777654 5 4899999999998777889999996554
Q ss_pred hhcCC-c----hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 349 SNWIP-D----SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 349 ~~~~~-d----~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
..... . .....++.++.++|+|||.+++...- .+.+..+.+ .||+..+..
T Consensus 283 g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~------~~~~~~~~~-~g~~~~~~~ 337 (354)
T 3tma_A 283 GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR------PALLKRALP-PGFALRHAR 337 (354)
T ss_dssp CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC------HHHHHHHCC-TTEEEEEEE
T ss_pred cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC------HHHHHHHhh-cCcEEEEEE
Confidence 22121 1 11367899999999999999986422 233444455 899877644
No 172
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.09 E-value=3.1e-10 Score=107.68 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=78.5
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhcCC-eeEEE-cccccCC---CCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASRGL-ISMHI-SVSQRLP---FFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~rg~-i~~~~-~d~~~lp---f~d~sfDlV~~~~~L~~~ 351 (430)
.+|||||||+|.++..++++|. +|+++ |+++.|++.+.++.. +.... .+...+. ++...||.+.+..++.+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gv--Dis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~- 115 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYAL--DVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS- 115 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEE--CSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC-
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEE--cCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh-
Confidence 4679999999999999999975 89998 777888887766532 22111 1111111 11112444444333322
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEee---cccc-------C----cC----cHHHHHHHHHHcCCEEEEEEecc
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDR---FFCF-------G----SQ----LNETYVPMLDRIGFKKLRWNVGM 408 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~---f~~~-------~----~~----~~~~~~~ll~~~Gfk~l~~~~~~ 408 (430)
+..++.++.|+|||||+|++.. |-.. + .. ..+.+..+++++||++..+...+
T Consensus 116 -----l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~p 185 (232)
T 3opn_A 116 -----LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSP 185 (232)
T ss_dssp -----GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECS
T ss_pred -----HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEcc
Confidence 2468999999999999998851 1100 0 00 22467889999999998877543
No 173
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.08 E-value=9.3e-11 Score=103.27 Aligned_cols=96 Identities=14% Similarity=0.127 Sum_probs=72.5
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C-CeeEEEcccccC-C-CC--CCceeEEEEccch
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G-LISMHISVSQRL-P-FF--ENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~l-p-f~--d~sfDlV~~~~~L 348 (430)
.+|||+|||+|.++..+++++..|+++ |+++.+++.++++ + .+.++.+|+... + ++ +++||+|++...+
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWEAVLV--EKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCEEEEE--CCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CeEEEeCCCcCHHHHHHHHCCCeEEEE--eCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 356999999999999999998888887 7778888877654 4 478888887653 2 11 3489999998666
Q ss_pred hhcCCchhHHHHHHHHH--HhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIY--RLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~--RvLrPGG~lvl~~f~ 380 (430)
+ .. ...++..+. ++|+|||.+++....
T Consensus 121 ~---~~--~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 121 A---MD--LAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp T---SC--TTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred c---hh--HHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 3 11 334556666 999999999997644
No 174
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.08 E-value=4.4e-10 Score=103.23 Aligned_cols=119 Identities=15% Similarity=0.163 Sum_probs=81.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCC-------C----CceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFF-------E----NTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~-------d----~sfDlV~~~~ 346 (430)
.+|||+|||+|.++..+++++.+|+++|++...+ ...+.++++|+...+.. . ++||+|++..
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~ 99 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE-------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDA 99 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC-------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECC
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEecccccc-------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCC
Confidence 4579999999999999999999999997754221 12378899998775521 1 4899999953
Q ss_pred ch---hhcCC-----chhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEec
Q 043503 347 VL---SNWIP-----DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 347 ~L---~~~~~-----d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
.. ..+.. ......++..+.++|||||.|++..|-. .....+...++. .|..++...+
T Consensus 100 ~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~---~~~~~~~~~l~~-~F~~v~~~kP 164 (191)
T 3dou_A 100 MAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG---DMTNDFIAIWRK-NFSSYKISKP 164 (191)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS---THHHHHHHHHGG-GEEEEEEECC
T ss_pred CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC---CCHHHHHHHHHH-hcCEEEEECC
Confidence 21 01000 1124578899999999999999876542 223445555543 5887775443
No 175
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.08 E-value=2.3e-09 Score=99.73 Aligned_cols=120 Identities=12% Similarity=0.078 Sum_probs=82.3
Q ss_pred CccEEEEEcCCccHHHHHHHHc-C--CEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCC---CCCCceeEEEEc
Q 043503 276 TIRIGLDIGGGTGTFAARMRER-N--VTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLP---FFENTLDIVHSM 345 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~-g--~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lp---f~d~sfDlV~~~ 345 (430)
...+|||+|||+|.++..++++ + .+|+++ |+++.+++.+.++ ..+.++.+|+.... ..+++||+|++.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~v--D~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGI--EFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEE--ESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEE--ECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 3356799999999999999987 3 788888 6678766655433 45889999887632 224689999985
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC-------c-HHHHHHHHHHcCCEEEEEE
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ-------L-NETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~-------~-~~~~~~ll~~~Gfk~l~~~ 405 (430)
.. .++ ....++.++.++|||||++++. +...... . .+++..+ .+. |+.++..
T Consensus 151 ~~----~~~-~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~ 210 (227)
T 1g8a_A 151 VA----QPT-QAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERL 210 (227)
T ss_dssp CC----STT-HHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEE
T ss_pred CC----CHh-HHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEe
Confidence 33 222 2445699999999999999987 2211111 1 1344454 566 9987654
No 176
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.08 E-value=2.3e-10 Score=107.02 Aligned_cols=106 Identities=20% Similarity=0.222 Sum_probs=81.4
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccC-CC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRL-PF 334 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~l-pf 334 (430)
+..++...++ .+|||+|||+|.++..+++. +.+|+++ |+++.+++.|+++ | .+.++.+|+... +.
T Consensus 46 l~~~~~~~~~---~~vLdiG~G~G~~~~~la~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 120 (233)
T 2gpy_A 46 LLHLLKMAAP---ARILEIGTAIGYSAIRMAQALPEATIVSI--ERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK 120 (233)
T ss_dssp HHHHHHHHCC---SEEEEECCTTSHHHHHHHHHCTTCEEEEE--CCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH
T ss_pred HHHHHhccCC---CEEEEecCCCcHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh
Confidence 4444444443 35699999999999999988 6889988 7778888887765 3 388888887663 43
Q ss_pred C--CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 335 F--ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 335 ~--d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
. +++||+|++..... + ...++.++.++|+|||.++++++..
T Consensus 121 ~~~~~~fD~I~~~~~~~----~--~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAKG----Q--YRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp HTTSCCEEEEEEEGGGS----C--HHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred cccCCCccEEEECCCHH----H--HHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 3 57899999965542 2 6789999999999999999986553
No 177
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.07 E-value=4.3e-10 Score=103.48 Aligned_cols=90 Identities=18% Similarity=0.114 Sum_probs=71.1
Q ss_pred cEEEEEcCCccHHHHHHHHcC---CEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccch
Q 043503 278 RIGLDIGGGTGTFAARMRERN---VTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g---~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L 348 (430)
.+|||+|||+|.++..+++.+ .+|+++ |+++.+++.++++ + .+.+..+|.......+++||+|++..++
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSI--ERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAG 156 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEE--ESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEE--eCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCch
Confidence 456999999999999999884 789988 6678888877764 3 3788888874322236789999999888
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
++ .+ .++.++|||||.+++..
T Consensus 157 ~~-~~--------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 157 PK-IP--------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp SS-CC--------HHHHHTEEEEEEEEEEE
T ss_pred HH-HH--------HHHHHHcCCCcEEEEEE
Confidence 54 43 38899999999999864
No 178
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.07 E-value=6e-10 Score=103.23 Aligned_cols=107 Identities=12% Similarity=0.074 Sum_probs=79.0
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccC-C
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRL-P 333 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~l-p 333 (430)
+..++...++ .+|||||||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++.+|+... +
T Consensus 50 l~~l~~~~~~---~~vLdiG~G~G~~~~~la~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 124 (223)
T 3duw_A 50 LQLLVQIQGA---RNILEIGTLGGYSTIWLARGLSSGGRVVTL--EASEKHADIARSNIERANLNDRVEVRTGLALDSLQ 124 (223)
T ss_dssp HHHHHHHHTC---SEEEEECCTTSHHHHHHHTTCCSSCEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred HHHHHHhhCC---CEEEEecCCccHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 3444343343 34699999999999999998 6899988 6668888777654 4 388999987543 2
Q ss_pred -CC---CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc
Q 043503 334 -FF---ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF 382 (430)
Q Consensus 334 -f~---d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~ 382 (430)
+. .++||+|++..... ....++.++.++|||||++++++.+..
T Consensus 125 ~~~~~~~~~fD~v~~d~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 125 QIENEKYEPFDFIFIDADKQ------NNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp HHHHTTCCCCSEEEECSCGG------GHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred HHHhcCCCCcCEEEEcCCcH------HHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 11 26799999854421 256899999999999999999876654
No 179
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.06 E-value=3.4e-10 Score=111.68 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=72.5
Q ss_pred ccEEEEEcCCccHHHHHHHHcC---CEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccCCCCCCceeEEEEccc
Q 043503 277 IRIGLDIGGGTGTFAARMRERN---VTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRLPFFENTLDIVHSMHV 347 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g---~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~lpf~d~sfDlV~~~~~ 347 (430)
..+|||||||+|.++..+++.+ .+|+++ |+++.+++.++++ |. +.+..+|....+..+++||+|++..+
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gv--D~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSV--EYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVG 153 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEE--ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCC
Confidence 3467999999999999999874 458988 6678888877765 43 88899998876556788999999888
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
+++ ++ .++.++|||||.+++.
T Consensus 154 ~~~-~~--------~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 154 VDE-VP--------ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp BSC-CC--------HHHHHHEEEEEEEEEE
T ss_pred HHH-HH--------HHHHHhcCCCcEEEEE
Confidence 854 43 4778999999999986
No 180
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.05 E-value=8.1e-10 Score=104.64 Aligned_cols=116 Identities=18% Similarity=0.207 Sum_probs=80.9
Q ss_pred cEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc------------C--CeeEEEccccc-CC--CCCCc
Q 043503 278 RIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR------------G--LISMHISVSQR-LP--FFENT 338 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r------------g--~i~~~~~d~~~-lp--f~d~s 338 (430)
.+|||||||+|.++..+++.+ ..|+++ |+++.+++.++++ + .+.++.+|+.. ++ +++++
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gv--D~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGM--EIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEE--ESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEE--EcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 457999999999999999884 578988 6778888766542 3 38899999876 66 77889
Q ss_pred eeEEEEccchhhcCCc------hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCC
Q 043503 339 LDIVHSMHVLSNWIPD------SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGF 399 (430)
Q Consensus 339 fDlV~~~~~L~~~~~d------~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gf 399 (430)
+|.|+....- .|... .....++.++.++|+|||.|++.. ......+...+.+...|.
T Consensus 129 ~d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t---d~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 129 LSKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT---DVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEEE---SCHHHHHHHHHHHHHSTT
T ss_pred cCEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe---ccHHHHHHHHHHHHhCcC
Confidence 9999864221 11100 001479999999999999999843 122233444556666664
No 181
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.05 E-value=1.2e-10 Score=107.85 Aligned_cols=94 Identities=15% Similarity=0.204 Sum_probs=73.3
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CCe-eEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GLI-SMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~i-~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++..++.. +++|+++ |+++.|++.++++ |.- .+...|.... .+.++||+|+...++++
T Consensus 51 ~~VLDlGCG~GplAl~l~~~~p~a~~~A~--Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 51 SSILDFGCGFNPLALYQWNENEKIIYHAY--DIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp SEEEEETCTTHHHHHHHHCSSCCCEEEEE--CSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHH
T ss_pred CeEEEecCCCCHHHHHHHhcCCCCEEEEE--eCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHh
Confidence 45699999999999999887 7888988 7779999888765 442 4444555433 35788999999999965
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
+++ .+..+.++.+.|+|||.|+--
T Consensus 128 -L~~--~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 128 -LKQ--QDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp -HHH--TTCCHHHHHHTCEEEEEEEEE
T ss_pred -hhh--hHHHHHHHHHHhCCCCEEEEe
Confidence 443 566777999999999988754
No 182
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.05 E-value=1.4e-09 Score=101.97 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=82.8
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ + .+.+..+|.....+++++||+|++.
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~----- 165 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVAGEVWTF--EAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD----- 165 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEE--CSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC-----
T ss_pred CEEEEeCCCccHHHHHHHHhCCEEEEE--ecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC-----
Confidence 457999999999999999888899988 7778888877764 3 3788888887644366789999983
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
.++ ...++.++.++|+|||.+++.... ......+...+.+. |..++
T Consensus 166 -~~~--~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~l~~~-f~~~~ 211 (248)
T 2yvl_A 166 -VRE--PWHYLEKVHKSLMEGAPVGFLLPT---ANQVIKLLESIENY-FGNLE 211 (248)
T ss_dssp -SSC--GGGGHHHHHHHBCTTCEEEEEESS---HHHHHHHHHHSTTT-EEEEE
T ss_pred -CcC--HHHHHHHHHHHcCCCCEEEEEeCC---HHHHHHHHHHHHhh-CCcce
Confidence 222 446799999999999999997533 12233455555555 66443
No 183
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.04 E-value=5.1e-10 Score=111.78 Aligned_cols=124 Identities=12% Similarity=0.008 Sum_probs=86.2
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C----CeeEEEcccccCCC----CCCceeEEEEc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G----LISMHISVSQRLPF----FENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g----~i~~~~~d~~~lpf----~d~sfDlV~~~ 345 (430)
.+|||+|||+|.++..++..|.+|+++ |+++.+++.++++ + .+.++++|+..+.. .+++||+|++.
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga~V~~V--D~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGAEVTHV--DASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEE--CSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CcEEEcccccCHHHHHHHHcCCEEEEE--ECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 457999999999999999998888888 7788888877654 3 27889898766431 15689999995
Q ss_pred cchhhcC-------CchhHHHHHHHHHHhccCCcEEEEeeccccCcC---cHHHHHHHHHHcCCEEEE
Q 043503 346 HVLSNWI-------PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ---LNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 346 ~~L~~~~-------~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~---~~~~~~~ll~~~Gfk~l~ 403 (430)
....... .......++.++.++|+|||+|++......... ..+.+.+.+.+.|+++..
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~ 300 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVAS 300 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEE
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 3311100 011367899999999999999887653332211 223344455578988763
No 184
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.04 E-value=4.1e-10 Score=103.65 Aligned_cols=95 Identities=11% Similarity=0.056 Sum_probs=74.3
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccC-CCCCCceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRL-PFFENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~l-pf~d~sfDlV~~~~ 346 (430)
++|||+|||+|..+..+++. +.+|+++ |+++.+++.++++ + .+.++.+|+... +..++ ||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMI--DPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEE--ESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 35699999999999999987 6789988 6678888777654 3 378999987553 54456 99999852
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
. .. ....++.++.++|||||++++++.+.
T Consensus 135 ~----~~--~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 135 D----VF--NGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp T----TS--CHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred C----hh--hhHHHHHHHHHhcCCCeEEEEECccc
Confidence 2 22 26789999999999999999976543
No 185
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.04 E-value=4.8e-10 Score=117.36 Aligned_cols=108 Identities=14% Similarity=0.133 Sum_probs=79.6
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d 336 (430)
.+.++..+......+|||||||+|.++..+++.+ .+|+++| +++ +++.|+++ | .+.++.+|+..++++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD--~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~- 222 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVE--AST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP- 222 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEE--CHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEE--cHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-
Confidence 3444443322233567999999999999999885 5899985 455 66666543 4 389999999887765
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
++||+|++...+.++..+ .....+.++.++|+|||++++.
T Consensus 223 ~~fD~Ivs~~~~~~~~~e-~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNE-RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp SCEEEEECCCCHHHHTCH-HHHHHHHHGGGGEEEEEEEESC
T ss_pred CCeEEEEEeCchHhcCcH-HHHHHHHHHHHhcCCCCEEEEE
Confidence 589999997776665444 3566777999999999999854
No 186
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.03 E-value=7.5e-10 Score=114.44 Aligned_cols=112 Identities=13% Similarity=0.093 Sum_probs=78.3
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-C-CEEEEEecCCChhHHHHH-------Hhc----C----CeeEEEc
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-N-VTIITTSLNLDGPFNSFI-------ASR----G----LISMHIS 327 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g-~~Vv~vdiD~s~~~le~a-------~~r----g----~i~~~~~ 327 (430)
+..++..+......+|||+|||+|.++..+++. + .+|+|+ |+++.+++.| +++ | .+.++.+
T Consensus 231 v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GV--Dis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 231 LSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGC--EIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEE--ECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEE--eCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 444444443334456799999999999999986 5 478988 5566665555 433 4 3778776
Q ss_pred ccccC--CC--CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc
Q 043503 328 VSQRL--PF--FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF 382 (430)
Q Consensus 328 d~~~l--pf--~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~ 382 (430)
|.... ++ ..++||+|+++..+ +.+ .....|.++.++|||||.+++.+.+..
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l--~~~--d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL--FDE--DLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT--CCH--HHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred CccccccccccccCCCCEEEEeCcc--ccc--cHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 54321 22 24789999997666 233 377889999999999999999865543
No 187
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.03 E-value=3.2e-10 Score=110.52 Aligned_cols=96 Identities=13% Similarity=0.023 Sum_probs=68.9
Q ss_pred ccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC--------CeeEE--EcccccCCCCCCceeEEEEcc
Q 043503 277 IRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG--------LISMH--ISVSQRLPFFENTLDIVHSMH 346 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg--------~i~~~--~~d~~~lpf~d~sfDlV~~~~ 346 (430)
..+|||+|||+|.++..++++ .+|+++|++ + |...+.++. .+.++ .+|+..++ +++||+|+|..
T Consensus 83 g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s--~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ-PNVREVKAY--T-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDI 156 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS-TTEEEEEEE--C-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCEEEEeccCCCHHHHHHHHc-CCEEEEECc--h-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECC
Confidence 346799999999999999998 789999664 3 322222221 36788 88888876 78999999965
Q ss_pred chhhcCCchh---H--HHHHHHHHHhccCCc--EEEEeecc
Q 043503 347 VLSNWIPDSM---L--EFTLYDIYRLLRPGG--IFWLDRFF 380 (430)
Q Consensus 347 ~L~~~~~d~~---l--~~~L~ei~RvLrPGG--~lvl~~f~ 380 (430)
. ++..... . ..+|.++.|+||||| .|++..|-
T Consensus 157 ~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 157 G--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp C--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred C--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 5 2221110 1 137899999999999 99987654
No 188
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.03 E-value=2.9e-10 Score=107.85 Aligned_cols=127 Identities=14% Similarity=0.103 Sum_probs=87.1
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc------CCEEEEEecCCChhHHHHHHhc-CCeeEEEcccccC---CC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER------NVTIITTSLNLDGPFNSFIASR-GLISMHISVSQRL---PF 334 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~------g~~Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~l---pf 334 (430)
+..++...++ .+|||||||+|..+..+++. +.+|+++ |+++.+++.|+.. ..+.++++|+... ++
T Consensus 73 l~~~l~~~~~---~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gv--D~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~ 147 (236)
T 2bm8_A 73 YHDMLWELRP---RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGI--DRDLSRCQIPASDMENITLHQGDCSDLTTFEH 147 (236)
T ss_dssp HHHHHHHHCC---SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEE--ESCCTTCCCCGGGCTTEEEEECCSSCSGGGGG
T ss_pred HHHHHHhcCC---CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEE--eCChHHHHHHhccCCceEEEECcchhHHHHHh
Confidence 4444444443 35699999999999999886 6899998 5556666555432 4589999998774 54
Q ss_pred CC-CceeEEEEccchhhcCCchhHHHHHHHHHH-hccCCcEEEEeeccccC-cCcHHHHHHHHHHc--CCEEE
Q 043503 335 FE-NTLDIVHSMHVLSNWIPDSMLEFTLYDIYR-LLRPGGIFWLDRFFCFG-SQLNETYVPMLDRI--GFKKL 402 (430)
Q Consensus 335 ~d-~sfDlV~~~~~L~~~~~d~~l~~~L~ei~R-vLrPGG~lvl~~f~~~~-~~~~~~~~~ll~~~--Gfk~l 402 (430)
.+ .+||+|++... | .+ ...++.++.| +|||||++++.++.... ......+.++++.. +|...
T Consensus 148 ~~~~~fD~I~~d~~--~--~~--~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 148 LREMAHPLIFIDNA--H--AN--TFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp GSSSCSSEEEEESS--C--SS--HHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred hccCCCCEEEECCc--h--Hh--HHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 34 47999998543 2 22 6789999998 99999999997542110 01123566677776 56654
No 189
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.01 E-value=2.1e-10 Score=122.36 Aligned_cols=126 Identities=10% Similarity=0.082 Sum_probs=90.6
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHh----cCC--eeEEEcccccC--CCCCCceeEEEEccchhh
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIAS----RGL--ISMHISVSQRL--PFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~----rg~--i~~~~~d~~~l--pf~d~sfDlV~~~~~L~~ 350 (430)
+|||||||.|.++..|+++|++|+|+ |.++.+++.|+. +|. +.+.+++++.+ ++.+++||+|+|+.+++|
T Consensus 69 ~vLDvGCG~G~~~~~la~~ga~V~gi--D~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~eh 146 (569)
T 4azs_A 69 NVLDLGCAQGFFSLSLASKGATIVGI--DFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHH 146 (569)
T ss_dssp EEEEETCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHH
T ss_pred eEEEECCCCcHHHHHHHhCCCEEEEE--CCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhc
Confidence 56999999999999999999999998 778888877654 353 88999999887 467889999999999987
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcC------cHHHHHHHHHHcCCEEEEEEec
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ------LNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~------~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
. ++......+..+.+.|+++|..++..+...+.. ...+|.++++..+|...--..+
T Consensus 147 v-~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~i~~~~~~~~~~~~g 208 (569)
T 4azs_A 147 I-VHLHGIDEVKRLLSRLADVTQAVILELAVKEEPFYWGVSQPDDPRELIEQCAFYRLIGEFD 208 (569)
T ss_dssp H-HHHHCHHHHHHHHHHHHHHSSEEEEECCCTTSSSGGGGGSCSSGGGGTTTSSEEEEEEEEC
T ss_pred C-CCHHHHHHHHHHHHHhccccceeeEEeccccccccccCCCCccHHHhcCHHHHHHHHHHcC
Confidence 4 332222345567888899888776554432211 1234666666666654433344
No 190
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.01 E-value=3.9e-09 Score=96.18 Aligned_cols=112 Identities=9% Similarity=0.020 Sum_probs=80.8
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhcC-CeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASRG-LISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~rg-~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
.+|||+|||+|.++..+++.+. +|+++ |+++.+++.++++- .+.++.+|+..++ ++||+|+++..++++ .+.
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~-~~~ 126 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAESVTAF--DIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSV-VKH 126 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBSEEEEE--ESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-------
T ss_pred CEEEEEeCCccHHHHHHHHcCCCEEEEE--ECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhc-cCc
Confidence 4679999999999999999865 68988 66789999888774 5789999988875 689999998888553 332
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
....++.++.+++ |+ +++.. . ......+.+.+...| +...
T Consensus 127 ~~~~~l~~~~~~~--g~-~~~~~---~-~~~~~~~~~~~~~~g-~~~~ 166 (200)
T 1ne2_A 127 SDRAFIDKAFETS--MW-IYSIG---N-AKARDFLRREFSARG-DVFR 166 (200)
T ss_dssp -CHHHHHHHHHHE--EE-EEEEE---E-GGGHHHHHHHHHHHE-EEEE
T ss_pred hhHHHHHHHHHhc--Cc-EEEEE---c-CchHHHHHHHHHHCC-CEEE
Confidence 3357899999998 55 44432 1 123455677788888 5443
No 191
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.00 E-value=8.2e-10 Score=99.82 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=76.7
Q ss_pred cEEEEEcCCccHHHHHHHHc-C----------CEEEEEecCCChhHHHHHHhcCCeeEE-EcccccCC--------CCCC
Q 043503 278 RIGLDIGGGTGTFAARMRER-N----------VTIITTSLNLDGPFNSFIASRGLISMH-ISVSQRLP--------FFEN 337 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g----------~~Vv~vdiD~s~~~le~a~~rg~i~~~-~~d~~~lp--------f~d~ 337 (430)
.+|||+|||+|.++..++++ + .+|+++|++... ....+.++ .+|....+ ++++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-------PLEGATFLCPADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-------CCTTCEEECSCCTTSHHHHHHHHHHSGGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-------cCCCCeEEEeccCCCHHHHHHHHHhcCCC
Confidence 45799999999999999987 4 789999654311 01236777 77765533 3456
Q ss_pred ceeEEEEccchh---hcCCch-----hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 338 TLDIVHSMHVLS---NWIPDS-----MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 338 sfDlV~~~~~L~---~~~~d~-----~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
+||+|++....+ ++..+. ....++.++.++|||||.|++..+.. .....+...+... |..+.+.
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~~l~~~-f~~v~~~ 168 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG---SQSRRLQRRLTEE-FQNVRII 168 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS---GGGHHHHHHHHHH-EEEEEEE
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC---ccHHHHHHHHHHH-hcceEEE
Confidence 899999964331 221110 11478999999999999999976542 2234455555543 6655543
No 192
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.00 E-value=1.2e-09 Score=101.36 Aligned_cols=90 Identities=18% Similarity=0.196 Sum_probs=71.6
Q ss_pred cEEEEEcCCccHHHHHHHHc-C--CEEEEEecCCChhHHHHHHhc-----------CCeeEEEcccccCCCCCCceeEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER-N--VTIITTSLNLDGPFNSFIASR-----------GLISMHISVSQRLPFFENTLDIVH 343 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g--~~Vv~vdiD~s~~~le~a~~r-----------g~i~~~~~d~~~lpf~d~sfDlV~ 343 (430)
.+|||+|||+|.++..+++. + .+|+++ |+++.+++.++++ ..+.++.+|....+..+++||+|+
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGI--DHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEE--ESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEE--eCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 45799999999999999987 4 689988 6678888777543 248888999876665677899999
Q ss_pred EccchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 344 SMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 344 ~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+...+.+ ++.++.++|||||++++..
T Consensus 157 ~~~~~~~---------~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 157 VGAAAPV---------VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp ECSBBSS---------CCHHHHHTEEEEEEEEEEE
T ss_pred ECCchHH---------HHHHHHHhcCCCcEEEEEE
Confidence 9776643 2358899999999999975
No 193
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.99 E-value=6.6e-09 Score=98.80 Aligned_cols=129 Identities=12% Similarity=0.069 Sum_probs=96.4
Q ss_pred HHHHHHccCCCCCccEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----CC---eeEEEcccccCCC
Q 043503 264 GIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRLPF 334 (430)
Q Consensus 264 ~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~lpf 334 (430)
.+..+....+.+ .+|||||||+|.+++.++..+ .+|+++ |+++.+++.|+++ |. +.+..+|......
T Consensus 11 RL~~i~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~Av--Di~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~ 86 (230)
T 3lec_A 11 RLQKVANYVPKG--ARLLDVGSDHAYLPIFLLQMGYCDFAIAG--EVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE 86 (230)
T ss_dssp HHHHHHTTSCTT--EEEEEETCSTTHHHHHHHHTTCEEEEEEE--ESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCCC--CEEEEECCchHHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc
Confidence 355555556544 457999999999999999985 368888 5567777776654 43 8999999766554
Q ss_pred CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 335 FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 335 ~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
+++.||+|+..+.... .+..++.+..+.|+++|+|++.... ..+.+.+.+.+.||.+++...
T Consensus 87 ~~~~~D~IviaGmGg~-----lI~~IL~~~~~~l~~~~~lIlqp~~-----~~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 87 EADNIDTITICGMGGR-----LIADILNNDIDKLQHVKTLVLQPNN-----REDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp GGGCCCEEEEEEECHH-----HHHHHHHHTGGGGTTCCEEEEEESS-----CHHHHHHHHHHTTEEEEEEEE
T ss_pred cccccCEEEEeCCchH-----HHHHHHHHHHHHhCcCCEEEEECCC-----ChHHHHHHHHHCCCEEEEEEE
Confidence 4457999886554432 3678899999999999999997532 256788889999999887653
No 194
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.99 E-value=3.2e-10 Score=115.92 Aligned_cols=106 Identities=17% Similarity=0.177 Sum_probs=78.3
Q ss_pred HHHHHccCCCCCccEEEEEcCC------ccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGG------TGTFAARMRER---NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFF 335 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcG------tG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~ 335 (430)
.++++..+... ..+||||||| +|..+..++++ +.+|+++|++ +.|. .....+.++++|+..+++.
T Consensus 206 Ye~lL~~l~~~-~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiS--p~m~---~~~~rI~fv~GDa~dlpf~ 279 (419)
T 3sso_A 206 YDRHFRDYRNQ-QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIM--DKSH---VDELRIRTIQGDQNDAEFL 279 (419)
T ss_dssp HHHHHGGGTTS-CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESS--CCGG---GCBTTEEEEECCTTCHHHH
T ss_pred HHHHHHhhcCC-CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECC--HHHh---hcCCCcEEEEecccccchh
Confidence 45555544322 3567999999 77777777764 6899999554 5552 2334589999999998877
Q ss_pred ------CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 336 ------ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 336 ------d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
+++||+|++.. . |+.. ....+|.++.|+|||||+|++.+..
T Consensus 280 ~~l~~~d~sFDlVisdg-s-H~~~--d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 280 DRIARRYGPFDIVIDDG-S-HINA--HVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHHCCEEEEEECS-C-CCHH--HHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhhhcccCCccEEEECC-c-ccch--hHHHHHHHHHHhcCCCeEEEEEecc
Confidence 78999999953 3 3333 3778999999999999999998765
No 195
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.98 E-value=4.9e-09 Score=108.67 Aligned_cols=140 Identities=19% Similarity=0.178 Sum_probs=96.2
Q ss_pred CCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--C-CEEEEEecCCChhHHHHHHhc----CC--eeEEEcc
Q 043503 258 NGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--N-VTIITTSLNLDGPFNSFIASR----GL--ISMHISV 328 (430)
Q Consensus 258 ~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g-~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d 328 (430)
+......+..++...++. +|||+|||+|..+..+++. + .+|+++ |+++.+++.++++ |. +.++.+|
T Consensus 244 qd~~s~l~~~~l~~~~g~---~VLDlgaG~G~~t~~la~~~~~~~~v~a~--D~s~~~l~~~~~~~~~~g~~~v~~~~~D 318 (450)
T 2yxl_A 244 QEEASAVASIVLDPKPGE---TVVDLAAAPGGKTTHLAELMKNKGKIYAF--DVDKMRMKRLKDFVKRMGIKIVKPLVKD 318 (450)
T ss_dssp CCHHHHHHHHHHCCCTTC---EEEESSCTTCHHHHHHHHHTTTCSEEEEE--CSCHHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred cCchhHHHHHhcCCCCcC---EEEEeCCCccHHHHHHHHHcCCCCEEEEE--cCCHHHHHHHHHHHHHcCCCcEEEEEcC
Confidence 333334445555554443 4699999999999999986 3 688988 7778887776654 54 7888889
Q ss_pred cccCC--CCCCceeEEEEc------cchhhcCCch-------h-------HHHHHHHHHHhccCCcEEEEeeccccCcCc
Q 043503 329 SQRLP--FFENTLDIVHSM------HVLSNWIPDS-------M-------LEFTLYDIYRLLRPGGIFWLDRFFCFGSQL 386 (430)
Q Consensus 329 ~~~lp--f~d~sfDlV~~~------~~L~~~~~d~-------~-------l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~ 386 (430)
+..++ +++++||+|++. .++.+ .++. . ...++.++.++|||||.+++++......+-
T Consensus 319 ~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~-~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~en 397 (450)
T 2yxl_A 319 ARKAPEIIGEEVADKVLLDAPCTSSGTIGK-NPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEEN 397 (450)
T ss_dssp TTCCSSSSCSSCEEEEEEECCCCCGGGTTT-STTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGT
T ss_pred hhhcchhhccCCCCEEEEcCCCCCCeeecc-ChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhH
Confidence 88776 555789999972 22211 2221 1 157899999999999999988754443333
Q ss_pred HHHHHHHHHHc-CCEEEE
Q 043503 387 NETYVPMLDRI-GFKKLR 403 (430)
Q Consensus 387 ~~~~~~ll~~~-Gfk~l~ 403 (430)
.+.+...+++. ||+.+.
T Consensus 398 e~~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 398 EKNIRWFLNVHPEFKLVP 415 (450)
T ss_dssp HHHHHHHHHHCSSCEECC
T ss_pred HHHHHHHHHhCCCCEEee
Confidence 45566777775 788654
No 196
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.98 E-value=5.7e-10 Score=108.09 Aligned_cols=95 Identities=14% Similarity=0.023 Sum_probs=68.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-------C-CeeEE--EcccccCCCCCCceeEEEEccc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-------G-LISMH--ISVSQRLPFFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-------g-~i~~~--~~d~~~lpf~d~sfDlV~~~~~ 347 (430)
.+|||+|||+|.++..++++ .+|+++|++. |...+.++ + .+.++ ++|+..++ +++||+|+|...
T Consensus 76 ~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~---m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~ 149 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR-PHVMDVRAYT---LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG 149 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS-TTEEEEEEEC---CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CEEEEeCcCCCHHHHHHHHc-CcEEEEECch---hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc
Confidence 45799999999999999998 7899996643 32212111 1 36777 78888776 789999999655
Q ss_pred hhhcCCchh---H--HHHHHHHHHhccCCc--EEEEeecc
Q 043503 348 LSNWIPDSM---L--EFTLYDIYRLLRPGG--IFWLDRFF 380 (430)
Q Consensus 348 L~~~~~d~~---l--~~~L~ei~RvLrPGG--~lvl~~f~ 380 (430)
++..... . ..+|.++.++|+||| .|++..|-
T Consensus 150 --~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 150 --ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp --CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred --ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 2222110 1 137899999999999 99997654
No 197
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.98 E-value=2.7e-09 Score=103.14 Aligned_cols=138 Identities=13% Similarity=-0.004 Sum_probs=92.8
Q ss_pred hHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--C-CEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccC
Q 043503 262 DYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--N-VTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRL 332 (430)
Q Consensus 262 ~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g-~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~l 332 (430)
...+..++...++. +|||+|||+|.++..+++. + .+|+++ |+++.+++.++++ |. +.++.+|+..+
T Consensus 72 s~l~~~~l~~~~g~---~VLDlgaG~G~~t~~la~~~~~~~~v~av--D~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~ 146 (274)
T 3ajd_A 72 SMIPPIVLNPREDD---FILDMCAAPGGKTTHLAQLMKNKGTIVAV--EISKTRTKALKSNINRMGVLNTIIINADMRKY 146 (274)
T ss_dssp GGHHHHHHCCCTTC---EEEETTCTTCHHHHHHHHHTTTCSEEEEE--ESCHHHHHHHHHHHHHTTCCSEEEEESCHHHH
T ss_pred HHHHHHHhCCCCcC---EEEEeCCCccHHHHHHHHHcCCCCEEEEE--CCCHHHHHHHHHHHHHhCCCcEEEEeCChHhc
Confidence 33344555554443 4699999999999999984 4 789988 6667777766654 43 78888998776
Q ss_pred CC----CCCceeEEEEccchhh---------cCC------chhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHH
Q 043503 333 PF----FENTLDIVHSMHVLSN---------WIP------DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPM 393 (430)
Q Consensus 333 pf----~d~sfDlV~~~~~L~~---------~~~------d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~l 393 (430)
+. .+++||+|++...... |.+ ......++.++.++|||||.+++++......+-.+.+..+
T Consensus 147 ~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~ 226 (274)
T 3ajd_A 147 KDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYI 226 (274)
T ss_dssp HHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHH
T ss_pred chhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHH
Confidence 54 2678999998521100 000 0125789999999999999999976443333334556666
Q ss_pred HHH-cCCEEEEE
Q 043503 394 LDR-IGFKKLRW 404 (430)
Q Consensus 394 l~~-~Gfk~l~~ 404 (430)
+++ .+|+.+..
T Consensus 227 l~~~~~~~~~~~ 238 (274)
T 3ajd_A 227 LQKRNDVELIII 238 (274)
T ss_dssp HHHCSSEEEECC
T ss_pred HHhCCCcEEecC
Confidence 654 45766543
No 198
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.98 E-value=2.6e-09 Score=103.36 Aligned_cols=94 Identities=12% Similarity=0.174 Sum_probs=74.9
Q ss_pred cEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..+++++ .+|+++ |+++.+++.++++ +. +.++.+|+..++. +++||+|++....
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~v--D~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAI--EKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEE--ECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS-
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEE--eCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc-
Confidence 457999999999999999983 489988 6678887776653 43 7789999887743 6789999996443
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
....++.++.++|+|||.++++.+..
T Consensus 197 ------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 14568999999999999999987654
No 199
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.97 E-value=1.3e-08 Score=93.01 Aligned_cols=117 Identities=12% Similarity=0.125 Sum_probs=85.1
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C-CeeEEEcccccCCCCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G-LISMHISVSQRLPFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g-~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~ 351 (430)
.+|||+|||+|.++..+++.+. +|+++ |+++.+++.++++ + .+.++.+|+..++ ++||+|+++..++.
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~- 124 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAKEVICV--EVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS- 124 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS-
T ss_pred CEEEEeeCCCCHHHHHHHHcCCCEEEEE--ECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc-
Confidence 4679999999999999999864 68888 6678888888765 3 4889999988865 48999999877643
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
........++.++.+++ ||.+++ .. ......+.+...+.+.||+.....
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~-~~--~~~~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSI-HL--AKPEVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEE-EE--CCHHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEE-Ee--CCcCCHHHHHHHHHHCCCeEEEEE
Confidence 33223567899999998 554433 21 122234556778889999866543
No 200
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.97 E-value=8.8e-09 Score=98.76 Aligned_cols=129 Identities=10% Similarity=-0.030 Sum_probs=95.2
Q ss_pred HHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----CC---eeEEEcccccCC
Q 043503 263 YGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRLP 333 (430)
Q Consensus 263 ~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~lp 333 (430)
..+..+....+.+ .+|||||||+|.+++.+++.+ .+|+++ |+++.+++.|+++ |. +.+..+|.....
T Consensus 10 ~RL~~i~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~av--Di~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~ 85 (244)
T 3gnl_A 10 KRLEKVASYITKN--ERIADIGSDHAYLPCFAVKNQTASFAIAG--EVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI 85 (244)
T ss_dssp HHHHHHHTTCCSS--EEEEEETCSTTHHHHHHHHTTSEEEEEEE--ESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC
T ss_pred HHHHHHHHhCCCC--CEEEEECCccHHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc
Confidence 3355555556544 457999999999999999985 368888 5567777777655 54 889999876654
Q ss_pred CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 334 FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 334 f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.++.+||+|+..+.... .+..++.+..+.|+++|+|++.... ..+.+.+.+.+.||.+++..
T Consensus 86 ~~~~~~D~IviagmGg~-----lI~~IL~~~~~~L~~~~~lIlq~~~-----~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 86 EKKDAIDTIVIAGMGGT-----LIRTILEEGAAKLAGVTKLILQPNI-----AAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp CGGGCCCEEEEEEECHH-----HHHHHHHHTGGGGTTCCEEEEEESS-----CHHHHHHHHHHHTEEEEEEE
T ss_pred CccccccEEEEeCCchH-----HHHHHHHHHHHHhCCCCEEEEEcCC-----ChHHHHHHHHHCCCEEEEEE
Confidence 44446999887544422 3677899999999999999997522 35678888999999976644
No 201
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.97 E-value=2.1e-09 Score=109.28 Aligned_cols=94 Identities=18% Similarity=0.259 Sum_probs=71.6
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHH----HhcCC---eeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFI----ASRGL---ISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a----~~rg~---i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
++|||||||+|.++..+++.|+ +|+++|.+ + |.+.| +.+|. |.++.++.+.+.++ ++||+|++-..-.
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s--~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGARRVYAVEAS--A-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECS--T-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CEEEEeCCCccHHHHHHHHhCCCEEEEEeCh--H-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 4579999999999998888875 79999654 3 44444 44454 89999999988876 5799999943322
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
....+..+..++....|.|+|||.++
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccccchhhhHHHHHHhhCCCCceEC
Confidence 22334458889999999999999986
No 202
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.97 E-value=1.1e-09 Score=102.92 Aligned_cols=88 Identities=19% Similarity=0.217 Sum_probs=68.8
Q ss_pred EEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCC-ceeEEEEccchhh
Q 043503 279 IGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFEN-TLDIVHSMHVLSN 350 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~-sfDlV~~~~~L~~ 350 (430)
+|||+|||+|.++..+++.+ .+|+++ |+++.+++.++++ | .+.+..+|. ..++++. .||+|++..++.+
T Consensus 94 ~vLdiG~G~G~~~~~la~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 94 NILEVGTGSGWNAALISEIVKTDVYTI--ERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAPK 170 (235)
T ss_dssp CEEEECCTTSHHHHHHHHHHCSCEEEE--ESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBSS
T ss_pred EEEEEeCCcCHHHHHHHHHhCCEEEEE--eCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcHHH
Confidence 45999999999999999985 888988 6678888777664 3 378888887 3455444 5999999887744
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
++ .++.++|+|||.+++..
T Consensus 171 -~~--------~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 171 -IP--------EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp -CC--------HHHHHTEEEEEEEEEEE
T ss_pred -HH--------HHHHHhcCCCcEEEEEE
Confidence 32 27889999999999864
No 203
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.96 E-value=2.6e-09 Score=106.11 Aligned_cols=99 Identities=15% Similarity=0.182 Sum_probs=75.6
Q ss_pred EEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc------CCeeEEEcccccC--CCCCCceeEEEEccch
Q 043503 279 IGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR------GLISMHISVSQRL--PFFENTLDIVHSMHVL 348 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r------g~i~~~~~d~~~l--pf~d~sfDlV~~~~~L 348 (430)
+|||||||+|.++..++++ +.+|+++ |+++.+++.++++ ..+.++++|+..+ .+++++||+|++....
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~V--Eidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVV--ELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEE--ESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEE--ECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 6799999999999999984 7788888 6678999999876 2388999997654 2457899999995333
Q ss_pred hhcCCch-hHHHHHHHHHHhccCCcEEEEeec
Q 043503 349 SNWIPDS-MLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 349 ~~~~~d~-~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
....+.. ....++.++.++|+|||+|++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2112211 126799999999999999988653
No 204
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.96 E-value=2.7e-10 Score=108.38 Aligned_cols=98 Identities=18% Similarity=0.206 Sum_probs=72.7
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHH----HHHHhcC---CeeEEEcccccC-CCC-----CCceeE
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFN----SFIASRG---LISMHISVSQRL-PFF-----ENTLDI 341 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~l----e~a~~rg---~i~~~~~d~~~l-pf~-----d~sfDl 341 (430)
++|||||||+|..+..+++. +.+|+++|++ +.++ +.+...| .+.++.+|+... +.. +++||+
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~--~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDIN--EGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECC--CSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 45699999999999999985 6799999654 4444 3333334 489999987553 321 578999
Q ss_pred EEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC
Q 043503 342 VHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG 383 (430)
Q Consensus 342 V~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~ 383 (430)
|++.... . ....++.++.++|||||++++++.+..+
T Consensus 140 V~~d~~~----~--~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 140 IFIDADK----T--NYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEESCG----G--GHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEEcCCh----H--HhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 9985432 1 2667899999999999999998766543
No 205
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.96 E-value=4.4e-09 Score=106.24 Aligned_cols=120 Identities=12% Similarity=-0.008 Sum_probs=87.7
Q ss_pred cEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----C--CeeEEEccccc-CCC-CCCceeEEEEccc
Q 043503 278 RIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----G--LISMHISVSQR-LPF-FENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~-lpf-~d~sfDlV~~~~~ 347 (430)
.+|||+| |+|.++..++..+ .+|+++ |+++.+++.|+++ | .+.++.+|+.. +|. .+++||+|+++..
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~~~~~v~~v--Di~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSGLPKRIAVL--DIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHTCCSEEEEE--CSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CEEEEEC-CCCHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 5679999 9999999998875 588888 7778888887765 5 38899999887 764 4678999999765
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEE-EEeeccccCcCc--HHHHHHHHH-HcCCEEEEEE
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIF-WLDRFFCFGSQL--NETYVPMLD-RIGFKKLRWN 405 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~l-vl~~f~~~~~~~--~~~~~~ll~-~~Gfk~l~~~ 405 (430)
+... ....++.++.++|+|||.+ +++. ....... ...+.+++. +.||+.....
T Consensus 251 ~~~~----~~~~~l~~~~~~LkpgG~~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 251 ETLE----AIRAFVGRGIATLKGPRCAGYFGI-TRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp SSHH----HHHHHHHHHHHTBCSTTCEEEEEE-CTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred CchH----HHHHHHHHHHHHcccCCeEEEEEE-ecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 5322 1578999999999999944 4442 2111111 145667777 8999875543
No 206
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.96 E-value=1.3e-09 Score=102.66 Aligned_cols=106 Identities=17% Similarity=0.244 Sum_probs=78.1
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC---eeEEEccccc-CC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQR-LP 333 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~-lp 333 (430)
+..++...++ .+|||||||+|.++..+++. +.+|+++ |+++.+++.++++ |. +.++.+|+.. ++
T Consensus 52 l~~l~~~~~~---~~VLdiG~G~G~~~~~la~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 126 (239)
T 2hnk_A 52 LNILTKISGA---KRIIEIGTFTGYSSLCFASALPEDGKILCC--DVSEEWTNVARKYWKENGLENKIFLKLGSALETLQ 126 (239)
T ss_dssp HHHHHHHHTC---SEEEEECCTTCHHHHHHHHHSCTTCEEEEE--ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHhhCc---CEEEEEeCCCCHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHH
Confidence 3444443343 34699999999999999987 5789988 6668888777655 43 7888887644 22
Q ss_pred --------------CCC--CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 334 --------------FFE--NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 334 --------------f~d--~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
|++ ++||+|++..... ....++.++.++|+|||++++.....
T Consensus 127 ~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 127 VLIDSKSAPSWASDFAFGPSSIDLFFLDADKE------NYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG------GHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHhhcccccccccccCCCCCcCEEEEeCCHH------HHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 223 7899999964432 25688999999999999999987543
No 207
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.96 E-value=1.2e-09 Score=104.17 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=78.3
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC---eeEEEcccccC-C
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRL-P 333 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~l-p 333 (430)
+..++...+. ++|||||||+|..+..+++. +.+|+++ |+++.+++.|+++ |. +.++.+|+... +
T Consensus 71 l~~l~~~~~~---~~VLeiG~G~G~~~~~la~~~~~~~~v~~i--D~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 145 (247)
T 1sui_A 71 LSMLLKLINA---KNTMEIGVYTGYSLLATALAIPEDGKILAM--DINKENYELGLPVIKKAGVDHKIDFREGPALPVLD 145 (247)
T ss_dssp HHHHHHHTTC---CEEEEECCGGGHHHHHHHHHSCTTCEEEEE--ESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHhhCc---CEEEEeCCCcCHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHH
Confidence 3444444443 35699999999999999987 6899988 5567777777654 43 78999987543 3
Q ss_pred -C-----CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 334 -F-----FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 334 -f-----~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
+ ++++||+|++... .. ....++.++.++|||||++++++.+.
T Consensus 146 ~l~~~~~~~~~fD~V~~d~~----~~--~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 146 EMIKDEKNHGSYDFIFVDAD----KD--NYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp HHHHSGGGTTCBSEEEECSC----ST--THHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred HHHhccCCCCCEEEEEEcCc----hH--HHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 2 2578999998532 22 26789999999999999999977554
No 208
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.94 E-value=1.4e-08 Score=96.21 Aligned_cols=126 Identities=15% Similarity=0.156 Sum_probs=92.0
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----CC---eeEEEccc-ccCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----GL---ISMHISVS-QRLPF 334 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~-~~lpf 334 (430)
+..+....+.+ .+|||||||+|.+++.++..+ .+|+++ |+++.+++.|+++ |. +.+..+|. +.++.
T Consensus 6 L~~l~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~av--Di~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~ 81 (225)
T 3kr9_A 6 LELVASFVSQG--AILLDVGSDHAYLPIELVERGQIKSAIAG--EVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE 81 (225)
T ss_dssp HHHHHTTSCTT--EEEEEETCSTTHHHHHHHHTTSEEEEEEE--ESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCCCC--CEEEEeCCCcHHHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc
Confidence 44455555543 357999999999999999985 468888 5567777766654 43 88999986 44542
Q ss_pred CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 335 FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 335 ~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
...||+|+..+.... .+..++.+....|+|||+|++... ...+.+.+.+.+.||.++...
T Consensus 82 -~~~~D~IviaG~Gg~-----~i~~Il~~~~~~L~~~~~lVlq~~-----~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 82 -TDQVSVITIAGMGGR-----LIARILEEGLGKLANVERLILQPN-----NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp -GGCCCEEEEEEECHH-----HHHHHHHHTGGGCTTCCEEEEEES-----SCHHHHHHHHHHTTEEEEEEE
T ss_pred -CcCCCEEEEcCCChH-----HHHHHHHHHHHHhCCCCEEEEECC-----CCHHHHHHHHHHCCCEEEEEE
Confidence 226999887544321 367899999999999999999653 235678888999999988755
No 209
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.94 E-value=3.3e-09 Score=105.14 Aligned_cols=91 Identities=15% Similarity=0.143 Sum_probs=67.6
Q ss_pred cEEEEEcCCccHHHHHHHHc-C--CEEEEEecCCChhHHHHHHhc-----------------CCeeEEEcccccC--CCC
Q 043503 278 RIGLDIGGGTGTFAARMRER-N--VTIITTSLNLDGPFNSFIASR-----------------GLISMHISVSQRL--PFF 335 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g--~~Vv~vdiD~s~~~le~a~~r-----------------g~i~~~~~d~~~l--pf~ 335 (430)
.+|||+|||+|.++..+++. | .+|+++ |+++.+++.|+++ ..+.++.+|+... +++
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISF--EVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEE--ESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEE--eCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 45699999999999999987 4 789988 6678888777653 2488999998776 466
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+++||+|++.... ...++.++.++|+|||.+++..
T Consensus 185 ~~~fD~V~~~~~~--------~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 185 SLTFDAVALDMLN--------PHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp ---EEEEEECSSS--------TTTTHHHHGGGEEEEEEEEEEE
T ss_pred CCCeeEEEECCCC--------HHHHHHHHHHhcCCCcEEEEEe
Confidence 7789999994221 1237899999999999998754
No 210
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.93 E-value=9.1e-09 Score=104.03 Aligned_cols=118 Identities=14% Similarity=0.060 Sum_probs=86.4
Q ss_pred cEEEEEcCCccHHHHHHHHcCC--EEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccch
Q 043503 278 RIGLDIGGGTGTFAARMRERNV--TIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~--~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~L 348 (430)
.+|||+|||+|.++..++..+. +|+++ |+++.+++.|+++ | .+.+.++|+..+++++++||+|+++..+
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~~~~v~g~--Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRYSGEIIGI--EKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTCCSCEEEE--ESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCC
T ss_pred CEEEEccCcCcHHHHHHHHhCCCCeEEEE--eCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCC
Confidence 3469999999999999999976 89998 6678888877655 4 3899999999999888999999997554
Q ss_pred hhcCC-----chhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 349 SNWIP-----DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 349 ~~~~~-----d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
..... ......++.++.|+| ||.+++.. + ..+.+.+.+.+.||+..+..
T Consensus 297 g~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~--~----~~~~~~~~~~~~G~~~~~~~ 350 (373)
T 3tm4_A 297 GLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT--T----EKKAIEEAIAENGFEIIHHR 350 (373)
T ss_dssp C------CCHHHHHHHHHHHHHHHE--EEEEEEEE--S----CHHHHHHHHHHTTEEEEEEE
T ss_pred CcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE--C----CHHHHHHHHHHcCCEEEEEE
Confidence 32111 111366888999999 44444322 1 13556778889999987644
No 211
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.93 E-value=1.8e-09 Score=100.19 Aligned_cols=90 Identities=14% Similarity=0.113 Sum_probs=71.7
Q ss_pred cEEEEEcCCccHHHHHHHHcC-------CEEEEEecCCChhHHHHHHhc----C-------CeeEEEcccccCC----CC
Q 043503 278 RIGLDIGGGTGTFAARMRERN-------VTIITTSLNLDGPFNSFIASR----G-------LISMHISVSQRLP----FF 335 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g-------~~Vv~vdiD~s~~~le~a~~r----g-------~i~~~~~d~~~lp----f~ 335 (430)
.+|||+|||+|.++..+++.. .+|+++ |+++.+++.++++ + .+.++.+|..... ..
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGL--ERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEE--ESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEE--eCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 456999999999999999874 389988 6678888777654 4 4888999987754 55
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+++||+|++...+.+ + +.++.++|+|||++++..
T Consensus 160 ~~~fD~I~~~~~~~~-~--------~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASASE-L--------PEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBSS-C--------CHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHH-H--------HHHHHHhcCCCcEEEEEE
Confidence 678999999877743 2 468899999999999864
No 212
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.93 E-value=3.1e-09 Score=104.45 Aligned_cols=99 Identities=23% Similarity=0.253 Sum_probs=71.4
Q ss_pred ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc-----------CCeeEEEcccccC-CCCCCceeEE
Q 043503 277 IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR-----------GLISMHISVSQRL-PFFENTLDIV 342 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r-----------g~i~~~~~d~~~l-pf~d~sfDlV 342 (430)
.++|||||||+|.++..+++. ..+|+++ |+++.+++.|+++ ..+.++.+|+... ...+++||+|
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~V--Did~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMV--EIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEE--CSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 456799999999999999988 4578888 6668888887653 2478899987654 3457899999
Q ss_pred EEccchhhcCCchhH--HHHHHHHHHhccCCcEEEEee
Q 043503 343 HSMHVLSNWIPDSML--EFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 343 ~~~~~L~~~~~d~~l--~~~L~ei~RvLrPGG~lvl~~ 378 (430)
++.... ++.+...+ ..++.++.++|+|||++++..
T Consensus 162 i~D~~~-p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCC-ccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 994332 33333222 679999999999999998864
No 213
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.92 E-value=2.2e-09 Score=100.95 Aligned_cols=97 Identities=21% Similarity=0.180 Sum_probs=74.5
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC---eeEEEccccc----CCCCC--CceeE
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQR----LPFFE--NTLDI 341 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~----lpf~d--~sfDl 341 (430)
++|||||||+|..+..+++. +.+|+++ |+++.+++.|+++ |. +.++.+|+.. ++..+ ++||+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~i--D~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIAC--DQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEE--ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 35699999999999999987 5689988 6678888777654 33 7888888643 33334 78999
Q ss_pred EEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecccc
Q 043503 342 VHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCF 382 (430)
Q Consensus 342 V~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~ 382 (430)
|++.... .....++.++.++|+|||++++++....
T Consensus 152 V~~d~~~------~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 152 IFIDADK------RNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEECSCG------GGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred EEECCCH------HHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 9985432 1367899999999999999999876643
No 214
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.92 E-value=1.7e-09 Score=105.52 Aligned_cols=105 Identities=14% Similarity=0.255 Sum_probs=73.8
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFEN 337 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~ 337 (430)
++.++.........+|||||||+|.++..+++++.+|+++ |+++.+++.++++ + .+.++.+|+..++++
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~-- 92 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVAC--ELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP-- 92 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEE--ESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEE--ECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--
Confidence 3444443333344567999999999999999999999998 6668888877764 2 378999999887765
Q ss_pred ceeEEEEccchhhcCCchhHHHHH--------------HHH--HHhccCCcEEE
Q 043503 338 TLDIVHSMHVLSNWIPDSMLEFTL--------------YDI--YRLLRPGGIFW 375 (430)
Q Consensus 338 sfDlV~~~~~L~~~~~d~~l~~~L--------------~ei--~RvLrPGG~lv 375 (430)
+||+|+++..+ +|..+ .+..++ .|+ .++|+|||.++
T Consensus 93 ~fD~vv~nlpy-~~~~~-~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 FFDTCVANLPY-QISSP-FVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCSEEEEECCG-GGHHH-HHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hhcEEEEecCc-ccchH-HHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 79999996544 44322 122222 233 37999999763
No 215
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.91 E-value=1.9e-09 Score=100.03 Aligned_cols=106 Identities=18% Similarity=0.198 Sum_probs=76.9
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccC-C
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRL-P 333 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~l-p 333 (430)
+..+....++ ++|||+|||+|.++..+++. +.+|+++ |+++.+++.++++ | .+.++.+|+... +
T Consensus 61 l~~l~~~~~~---~~vLdiG~G~G~~~~~la~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~ 135 (229)
T 2avd_A 61 LANLARLIQA---KKALDLGTFTGYSALALALALPADGRVVTC--EVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLD 135 (229)
T ss_dssp HHHHHHHTTC---CEEEEECCTTSHHHHHHHTTSCTTCEEEEE--ESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred HHHHHHhcCC---CEEEEEcCCccHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHH
Confidence 3344444443 35699999999999999986 5789988 5567777776654 3 488888886443 1
Q ss_pred -CCC----CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 334 -FFE----NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 334 -f~d----~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
+.+ ++||+|++.... . ....++.++.++|+|||.+++++.+.
T Consensus 136 ~~~~~~~~~~~D~v~~d~~~----~--~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 136 ELLAAGEAGTFDVAVVDADK----E--NCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp HHHHTTCTTCEEEEEECSCS----T--THHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred HHHhcCCCCCccEEEECCCH----H--HHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 211 689999995331 2 26789999999999999999977654
No 216
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.90 E-value=4.3e-09 Score=98.08 Aligned_cols=89 Identities=13% Similarity=0.192 Sum_probs=70.1
Q ss_pred cEEEEEcCCccHHHHHHHHc-C-------CEEEEEecCCChhHHHHHHhc-----------CCeeEEEcccccCCCCC-C
Q 043503 278 RIGLDIGGGTGTFAARMRER-N-------VTIITTSLNLDGPFNSFIASR-----------GLISMHISVSQRLPFFE-N 337 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g-------~~Vv~vdiD~s~~~le~a~~r-----------g~i~~~~~d~~~lpf~d-~ 337 (430)
.+|||+|||+|.++..+++. + .+|+++ |+++.+++.++++ ..+.++.+|... ++++ +
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 162 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGI--EHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNA 162 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEE--ESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGC
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEE--EcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCC
Confidence 35699999999999999986 4 489988 6678888777653 258888998876 4444 7
Q ss_pred ceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 338 TLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 338 sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+||+|++...+.+ + ..++.++|||||++++..
T Consensus 163 ~fD~I~~~~~~~~-~--------~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 163 PYNAIHVGAAAPD-T--------PTELINQLASGGRLIVPV 194 (227)
T ss_dssp SEEEEEECSCBSS-C--------CHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCchHH-H--------HHHHHHHhcCCCEEEEEE
Confidence 8999999877743 3 258899999999999864
No 217
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=2.1e-09 Score=106.18 Aligned_cols=100 Identities=14% Similarity=0.009 Sum_probs=67.1
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecC-C-ChhHHHHHH-h-c--CCeeEEEc-ccccCCCCCCceeEEEEccchh-
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLN-L-DGPFNSFIA-S-R--GLISMHIS-VSQRLPFFENTLDIVHSMHVLS- 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD-~-s~~~le~a~-~-r--g~i~~~~~-d~~~lpf~d~sfDlV~~~~~L~- 349 (430)
.+|||+|||+|.++..++++ .+|+++|+. . ++.+++.+. + . ..+.++.+ |+..++ +++||+|+|.....
T Consensus 84 ~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~ 160 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIGESS 160 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCCCCC
T ss_pred CEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECCcccc
Confidence 46799999999999999998 578998661 0 122111111 1 1 23788888 777665 56899999965431
Q ss_pred -hcCCchh-HHHHHHHHHHhccCCcEEEEeecc
Q 043503 350 -NWIPDSM-LEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 350 -~~~~d~~-l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
++..+.. ...+|.++.++|||||.|++..|.
T Consensus 161 g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 161 PNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred CcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 2222211 115789999999999999986554
No 218
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.88 E-value=4.4e-09 Score=102.54 Aligned_cols=133 Identities=12% Similarity=0.133 Sum_probs=86.6
Q ss_pred cCCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc----CC---eeEEEcc
Q 043503 257 DNGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR----GL---ISMHISV 328 (430)
Q Consensus 257 ~~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d 328 (430)
+.......++.++...+.....+|||+|||+|.++..++.. +.+|+++ |+++.+++.|+++ |. +.++++|
T Consensus 104 pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~v--Dis~~al~~A~~n~~~~~l~~~v~~~~~D 181 (284)
T 1nv8_A 104 PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFAT--DVSSKAVEIARKNAERHGVSDRFFVRKGE 181 (284)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEE--ESCHHHHHHHHHHHHHTTCTTSEEEEESS
T ss_pred cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 44444444555554332112235699999999999999998 7899998 6778888877654 43 8899998
Q ss_pred cccCCCCCCce---eEEEEccchhh----------cCCch------hHHHHHHHHH-HhccCCcEEEEeeccccCcCcHH
Q 043503 329 SQRLPFFENTL---DIVHSMHVLSN----------WIPDS------MLEFTLYDIY-RLLRPGGIFWLDRFFCFGSQLNE 388 (430)
Q Consensus 329 ~~~lpf~d~sf---DlV~~~~~L~~----------~~~d~------~l~~~L~ei~-RvLrPGG~lvl~~f~~~~~~~~~ 388 (430)
+... ++ ++| |+|+++..... +.+.. +...++.++. +.|+|||++++..- ....+
T Consensus 182 ~~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~----~~q~~ 255 (284)
T 1nv8_A 182 FLEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG----EDQVE 255 (284)
T ss_dssp TTGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC----TTCHH
T ss_pred chhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC----chHHH
Confidence 8652 22 578 99999622210 11110 1126899999 99999999998532 22334
Q ss_pred HHHHHHHHc
Q 043503 389 TYVPMLDRI 397 (430)
Q Consensus 389 ~~~~ll~~~ 397 (430)
.+.+++.+.
T Consensus 256 ~v~~~~~~~ 264 (284)
T 1nv8_A 256 ELKKIVSDT 264 (284)
T ss_dssp HHTTTSTTC
T ss_pred HHHHHHHhC
Confidence 455555443
No 219
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.87 E-value=7.7e-09 Score=103.41 Aligned_cols=98 Identities=19% Similarity=0.166 Sum_probs=74.3
Q ss_pred ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----------CCeeEEEcccccC-C-CCCCceeEE
Q 043503 277 IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----------GLISMHISVSQRL-P-FFENTLDIV 342 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~l-p-f~d~sfDlV 342 (430)
.++|||||||+|.++..+++. ..+|+++ |+++.+++.|+++ ..+.++.+|+..+ + +++++||+|
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~V--Dis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMC--EIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEE--ESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEE--ECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 356799999999999999987 4688888 6678888887654 2488999997653 2 346789999
Q ss_pred EEccchhhcCCch--hHHHHHHHHHHhccCCcEEEEe
Q 043503 343 HSMHVLSNWIPDS--MLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 343 ~~~~~L~~~~~d~--~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
++.... .+.+.. ....++.++.++|+|||+|++.
T Consensus 199 i~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSD-PIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EECCCC-TTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCC-ccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 995432 211111 1367999999999999999995
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.87 E-value=9.6e-09 Score=101.54 Aligned_cols=119 Identities=15% Similarity=0.156 Sum_probs=83.2
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc-----------CCeeEEEccccc-CCCCCCceeEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR-----------GLISMHISVSQR-LPFFENTLDIVH 343 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r-----------g~i~~~~~d~~~-lpf~d~sfDlV~ 343 (430)
++|||||||+|.++..+++. +.+|+++ |+++.+++.++++ ..+.++.+|+.. ++..+++||+|+
T Consensus 79 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~v--Did~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 79 KRVLIVGGGEGATLREVLKHPTVEKAVMV--DIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CEEEEEECTTSHHHHHHTTSTTCCEEEEE--ESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CeEEEEcCCcCHHHHHHHhcCCCCEEEEE--ECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 56799999999999999987 5688888 6668888777643 248889998765 344578899999
Q ss_pred Eccchhhc---CCchh--HHHHHHHHHHhccCCcEEEEeeccc--cCcCcHHHHHHHHHHcCCE
Q 043503 344 SMHVLSNW---IPDSM--LEFTLYDIYRLLRPGGIFWLDRFFC--FGSQLNETYVPMLDRIGFK 400 (430)
Q Consensus 344 ~~~~L~~~---~~d~~--l~~~L~ei~RvLrPGG~lvl~~f~~--~~~~~~~~~~~ll~~~Gfk 400 (430)
+.... ++ .+... ...++.++.++|+|||.+++..... ...+....+.+.+++. |.
T Consensus 157 ~d~~~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~ 218 (314)
T 1uir_A 157 IDLTD-PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FR 218 (314)
T ss_dssp EECCC-CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT-CS
T ss_pred ECCCC-cccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH-CC
Confidence 96443 43 11111 3689999999999999999864221 1223345555666665 44
No 221
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.87 E-value=6.7e-09 Score=100.80 Aligned_cols=123 Identities=16% Similarity=0.160 Sum_probs=84.5
Q ss_pred ccEEEEEcCCccHHHHHHHHc-C-CEEEEEecCCChhHHHHHHhc----------CCeeEEEccccc-CCCCCCceeEEE
Q 043503 277 IRIGLDIGGGTGTFAARMRER-N-VTIITTSLNLDGPFNSFIASR----------GLISMHISVSQR-LPFFENTLDIVH 343 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~-g-~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~-lpf~d~sfDlV~ 343 (430)
.++|||||||+|.++..++++ + .+|+++ |+++.+++.|+++ ..+.++.+|+.. ++..+++||+|+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v--Eid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLV--DIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEE--ESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEE--ECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 356799999999999999988 4 688888 5668888887753 238899998765 344467899999
Q ss_pred EccchhhcCCch--hHHHHHHHHHHhccCCcEEEEeeccc-cCcCcHHHHHHHHHHcCCEEEE
Q 043503 344 SMHVLSNWIPDS--MLEFTLYDIYRLLRPGGIFWLDRFFC-FGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 344 ~~~~L~~~~~d~--~l~~~L~ei~RvLrPGG~lvl~~f~~-~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
+.... ++.+.. ....++.++.++|+|||.+++..... ...+....+.+.+++. |..+.
T Consensus 154 ~d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 214 (275)
T 1iy9_A 154 VDSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPITK 214 (275)
T ss_dssp ESCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEE
T ss_pred ECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeE
Confidence 95332 322211 12578999999999999999863211 1122234455666666 55443
No 222
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.86 E-value=9.2e-09 Score=107.20 Aligned_cols=142 Identities=17% Similarity=0.220 Sum_probs=95.8
Q ss_pred CCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC-eeEEEccc
Q 043503 258 NGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL-ISMHISVS 329 (430)
Q Consensus 258 ~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~ 329 (430)
+......+..++...++. +|||+|||+|..+..++++ ..+|+++ |+++.+++.++++ |. +.++.+|+
T Consensus 86 Qd~ss~l~a~~L~~~~g~---~VLDlgaGpG~kt~~LA~~~~~~g~V~Av--Dis~~~l~~a~~n~~r~G~~v~~~~~Da 160 (464)
T 3m6w_A 86 QEPSAQAVGVLLDPKPGE---RVLDLAAAPGGKTTHLAARMGGKGLLLAN--EVDGKRVRGLLENVERWGAPLAVTQAPP 160 (464)
T ss_dssp CCTTTHHHHHHHCCCTTC---EEEESSCTTCHHHHHHHHHTTTCSEEEEE--CSCHHHHHHHHHHHHHHCCCCEEECSCH
T ss_pred ECHHHHHHHHhcCcCCCC---EEEEEcCCcCHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCeEEEEECCH
Confidence 333344455666655544 4599999999999999976 3688888 7778888777654 44 77788888
Q ss_pred ccCC-CCCCceeEEEEc------cchh-------hcCCch------hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHH
Q 043503 330 QRLP-FFENTLDIVHSM------HVLS-------NWIPDS------MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNET 389 (430)
Q Consensus 330 ~~lp-f~d~sfDlV~~~------~~L~-------~~~~d~------~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~ 389 (430)
..++ +.+++||+|++. .++. .|.++. ....+|.++.++|||||++++++-.....+-.+.
T Consensus 161 ~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~v 240 (464)
T 3m6w_A 161 RALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGV 240 (464)
T ss_dssp HHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHH
T ss_pred HHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHH
Confidence 7766 346899999962 1111 111110 1267899999999999999987633333334456
Q ss_pred HHHHHHHc-CCEEEEE
Q 043503 390 YVPMLDRI-GFKKLRW 404 (430)
Q Consensus 390 ~~~ll~~~-Gfk~l~~ 404 (430)
+..++++. +|+.+..
T Consensus 241 v~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 241 VAHFLKAHPEFRLEDA 256 (464)
T ss_dssp HHHHHHHCTTEEEECC
T ss_pred HHHHHHHCCCcEEEec
Confidence 66777776 5877654
No 223
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.86 E-value=7.4e-09 Score=101.55 Aligned_cols=121 Identities=16% Similarity=0.143 Sum_probs=80.5
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----------CCeeEEEccccc-CCCCCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----------GLISMHISVSQR-LPFFENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~-lpf~d~sfDlV~~ 344 (430)
.+|||||||+|.++..+++. ..+|+++ |+++.+++.++++ ..+.++.+|+.. ++..+++||+|++
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~v--Did~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVEKAILC--EVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCSEEEEE--ESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCCEEEEE--ECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 56799999999999999988 4688888 6668888777653 248889998755 3444678999998
Q ss_pred ccchhhcC-Cch--hHHHHHHHHHHhccCCcEEEEeeccc-cCcCcHHHHHHHHHHcCCEEE
Q 043503 345 MHVLSNWI-PDS--MLEFTLYDIYRLLRPGGIFWLDRFFC-FGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 345 ~~~L~~~~-~d~--~l~~~L~ei~RvLrPGG~lvl~~f~~-~~~~~~~~~~~ll~~~Gfk~l 402 (430)
... .++. +.. ....++.++.++|+|||.+++..... ........+.+.+.+. |..+
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v 229 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPIT 229 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEE
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCce
Confidence 432 2211 110 12678999999999999999863111 1112234455555555 4433
No 224
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.86 E-value=8.9e-09 Score=102.25 Aligned_cols=121 Identities=18% Similarity=0.197 Sum_probs=82.7
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----------CCeeEEEccccc-CCCCCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----------GLISMHISVSQR-LPFFENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~-lpf~d~sfDlV~~ 344 (430)
++|||||||+|.++..+++. +.+|+++ |+++.+++.++++ ..+.++.+|+.. ++..+++||+|++
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~v--Dis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVENIDIC--EIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCEEEEE--ESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCEEEEE--ECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 56799999999999999987 4788888 6678888888764 237888998755 3334678999998
Q ss_pred ccchhhcCCchhH--HHHHHHHHHhccCCcEEEEeeccc-cCcCcHHHHHHHHHHcCCEEE
Q 043503 345 MHVLSNWIPDSML--EFTLYDIYRLLRPGGIFWLDRFFC-FGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 345 ~~~L~~~~~d~~l--~~~L~ei~RvLrPGG~lvl~~f~~-~~~~~~~~~~~ll~~~Gfk~l 402 (430)
... .++.+...+ ..++.++.++|+|||++++..... ...+....+.+.+++. |..+
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v 254 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKV 254 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT-CSEE
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCCe
Confidence 532 222221112 689999999999999999853221 1112233455555555 4433
No 225
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.86 E-value=2e-08 Score=103.26 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=90.7
Q ss_pred hHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccCC-
Q 043503 262 DYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRLP- 333 (430)
Q Consensus 262 ~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~lp- 333 (430)
...+..++...++. +|||+|||+|..+..+++.. .+|+++| +++.+++.++++ |. +.++.+|+..++
T Consensus 235 s~~~~~~l~~~~g~---~VLDlgaG~G~~t~~la~~~~~~~v~a~D--~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~ 309 (429)
T 1sqg_A 235 AQGCMTWLAPQNGE---HILDLCAAPGGKTTHILEVAPEAQVVAVD--IDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ 309 (429)
T ss_dssp HHTHHHHHCCCTTC---EEEEESCTTCHHHHHHHHHCTTCEEEEEE--SSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH
T ss_pred HHHHHHHcCCCCcC---eEEEECCCchHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHHHHHcCCCeEEEeCchhhchh
Confidence 33344555554443 46999999999999999873 6899985 455656555443 54 788888988776
Q ss_pred -CCCCceeEEEEc------cchhhcCCch--------------hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHH
Q 043503 334 -FFENTLDIVHSM------HVLSNWIPDS--------------MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVP 392 (430)
Q Consensus 334 -f~d~sfDlV~~~------~~L~~~~~d~--------------~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ 392 (430)
+++++||+|++. .++.+ .++. ....++.++.++|||||++++++......+-.+.+..
T Consensus 310 ~~~~~~fD~Vl~D~Pcsg~g~~~~-~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~ 388 (429)
T 1sqg_A 310 WCGEQQFDRILLDAPCSATGVIRR-HPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 (429)
T ss_dssp HHTTCCEEEEEEECCCCCGGGTTT-CTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred hcccCCCCEEEEeCCCCcccccCC-CcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHH
Confidence 566889999972 11211 2220 1147899999999999999998744333333345666
Q ss_pred HHHHc-CCEEEE
Q 043503 393 MLDRI-GFKKLR 403 (430)
Q Consensus 393 ll~~~-Gfk~l~ 403 (430)
.+++. +|+.+.
T Consensus 389 ~l~~~~~~~~~~ 400 (429)
T 1sqg_A 389 FLQRTADAELCE 400 (429)
T ss_dssp HHHHCTTCEECS
T ss_pred HHHhCCCCEEeC
Confidence 66664 577643
No 226
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.86 E-value=1.5e-08 Score=98.92 Aligned_cols=116 Identities=15% Similarity=0.147 Sum_probs=85.1
Q ss_pred cEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHh----cCC---eeEEEcccccCCCCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIAS----RGL---ISMHISVSQRLPFFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~----rg~---i~~~~~d~~~lpf~d~sfDlV~~~~~L~ 349 (430)
.+|||+|||+|.++..++.+| .+|+++ |+++.+.+.+++ +|+ +.++.+|+..++ ..+.||.|++....
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~g~~~V~av--D~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p~- 202 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAI--EKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYVV- 202 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHHTCCEEEEE--CCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCCS-
T ss_pred CEEEEecCcCcHHHHHHHHhcCCeEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCCC-
Confidence 347999999999999999886 689988 556666655544 344 888999988876 46789999985322
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeeccccC---cCcHHHHHHHHHHcCCEEEE
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG---SQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~---~~~~~~~~~ll~~~Gfk~l~ 403 (430)
. ...++..+.++|+|||++.+..+.... ....+.+.......|+++..
T Consensus 203 ----~--~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~ 253 (278)
T 3k6r_A 203 ----R--THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----S--GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ----c--HHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEE
Confidence 1 235778888999999998776655322 12345677888899998644
No 227
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.85 E-value=8.7e-09 Score=100.32 Aligned_cols=99 Identities=18% Similarity=0.183 Sum_probs=74.9
Q ss_pred ccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----------CCeeEEEcccccC-CCCCCceeEEE
Q 043503 277 IRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----------GLISMHISVSQRL-PFFENTLDIVH 343 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~l-pf~d~sfDlV~ 343 (430)
.++|||||||+|.++..+++. +.+|+++ |+++.+++.++++ ..+.++.+|+... +..+++||+|+
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v--Did~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDIC--EIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEE--ESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEE--ECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 357799999999999999987 4688888 6668888888764 2378888887653 33367899999
Q ss_pred EccchhhcCCchhH--HHHHHHHHHhccCCcEEEEee
Q 043503 344 SMHVLSNWIPDSML--EFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 344 ~~~~L~~~~~d~~l--~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+.... ++.+...+ ..++.++.++|+|||.+++..
T Consensus 157 ~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCC-TTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 94332 32222222 689999999999999999863
No 228
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.85 E-value=5.6e-09 Score=98.67 Aligned_cols=106 Identities=16% Similarity=0.081 Sum_probs=78.1
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC---eeEEEcccccC-C
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRL-P 333 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~l-p 333 (430)
+..++...+. ++|||||||+|..+..+++. +.+|+++ |+++.+.+.++++ |. +.++.+|+... +
T Consensus 62 l~~l~~~~~~---~~VLeiG~G~G~~~~~la~~~~~~~~v~~i--D~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 136 (237)
T 3c3y_A 62 MSFVLKLVNA---KKTIEVGVFTGYSLLLTALSIPDDGKITAI--DFDREAYEIGLPFIRKAGVEHKINFIESDAMLALD 136 (237)
T ss_dssp HHHHHHHTTC---CEEEEECCTTSHHHHHHHHHSCTTCEEEEE--ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHhhCC---CEEEEeCCCCCHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 4444444443 45699999999999999986 6789988 6668888777654 43 78898887543 2
Q ss_pred -C-----CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 334 -F-----FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 334 -f-----~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
+ ++++||+|++.... .....++.++.++|+|||++++++.+.
T Consensus 137 ~l~~~~~~~~~fD~I~~d~~~------~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 137 NLLQGQESEGSYDFGFVDADK------PNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp HHHHSTTCTTCEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred HHHhccCCCCCcCEEEECCch------HHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 2 25789999985321 236789999999999999999976543
No 229
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.84 E-value=6e-09 Score=102.74 Aligned_cols=99 Identities=14% Similarity=0.181 Sum_probs=72.5
Q ss_pred ccEEEEEcCCccHHHHHHHHcC--CEEEEEecCCChhHHHHHHhc----------CCeeEEEccccc-CCCCCCceeEEE
Q 043503 277 IRIGLDIGGGTGTFAARMRERN--VTIITTSLNLDGPFNSFIASR----------GLISMHISVSQR-LPFFENTLDIVH 343 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g--~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~-lpf~d~sfDlV~ 343 (430)
.++|||||||+|.++..++++. .+|+++ |+++.+++.|+++ ..+.++.+|+.. ++..+++||+|+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v--Did~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQC--EIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEE--ESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEE--ECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 3567999999999999999883 688888 6668888877653 238889998755 344568899999
Q ss_pred EccchhhcCCch--hHHHHHHHHHHhccCCcEEEEee
Q 043503 344 SMHVLSNWIPDS--MLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 344 ~~~~L~~~~~d~--~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+.... ++.+.. ....++.++.++|+|||.+++..
T Consensus 174 ~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSD-PMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCC-CCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 95332 322211 13568999999999999999865
No 230
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.84 E-value=1.4e-08 Score=105.66 Aligned_cols=142 Identities=11% Similarity=0.116 Sum_probs=96.7
Q ss_pred CCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC--eeEEEcc
Q 043503 258 NGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL--ISMHISV 328 (430)
Q Consensus 258 ~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d 328 (430)
+......+..++...++. +|||+|||+|..+..+++. ..+|+++ |+++.+++.++++ |. +.+..+|
T Consensus 90 Qd~ss~l~~~~L~~~~g~---~VLDlcaGpGgkt~~lA~~~~~~g~V~Av--Dis~~rl~~~~~n~~r~g~~nv~v~~~D 164 (456)
T 3m4x_A 90 QEPSAMIVGTAAAAKPGE---KVLDLCAAPGGKSTQLAAQMKGKGLLVTN--EIFPKRAKILSENIERWGVSNAIVTNHA 164 (456)
T ss_dssp CCTTTHHHHHHHCCCTTC---EEEESSCTTCHHHHHHHHHHTTCSEEEEE--CSSHHHHHHHHHHHHHHTCSSEEEECCC
T ss_pred ECHHHHHHHHHcCCCCCC---EEEEECCCcCHHHHHHHHHcCCCCEEEEE--eCCHHHHHHHHHHHHHcCCCceEEEeCC
Confidence 333344455666655543 4699999999999999986 3688888 6678777666544 54 7778888
Q ss_pred cccCC-CCCCceeEEEEccc------hh-------hcCCch------hHHHHHHHHHHhccCCcEEEEeeccccCcCcHH
Q 043503 329 SQRLP-FFENTLDIVHSMHV------LS-------NWIPDS------MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNE 388 (430)
Q Consensus 329 ~~~lp-f~d~sfDlV~~~~~------L~-------~~~~d~------~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~ 388 (430)
+..++ ..+++||+|++.-. +. .|.++. ....+|.++.++|||||.+++++-.....+-.+
T Consensus 165 a~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~ 244 (456)
T 3m4x_A 165 PAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEE 244 (456)
T ss_dssp HHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHH
T ss_pred HHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHH
Confidence 87765 34678999998321 11 111110 123789999999999999998764333344456
Q ss_pred HHHHHHHHcCCEEEEE
Q 043503 389 TYVPMLDRIGFKKLRW 404 (430)
Q Consensus 389 ~~~~ll~~~Gfk~l~~ 404 (430)
.+..++++.+|+++..
T Consensus 245 vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 245 IISWLVENYPVTIEEI 260 (456)
T ss_dssp HHHHHHHHSSEEEECC
T ss_pred HHHHHHHhCCCEEEec
Confidence 6788888888776654
No 231
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.83 E-value=4.8e-09 Score=104.00 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=71.0
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----------CCeeEEEccccc-CCCCCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----------GLISMHISVSQR-LPFFENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~-lpf~d~sfDlV~~ 344 (430)
++|||||||+|.++..+++. ..+|+++ |+++.+++.|+++ ..+.++.+|+.. ++..+++||+|++
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~~~~v~~v--Did~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHESVEKVTMC--EIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTTCCEEEEE--CSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHcCCCCEEEEE--ECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 56799999999999999987 4688888 7778898888764 237888888755 3335678999999
Q ss_pred ccchhhcCCchhH--HHHHHHHHHhccCCcEEEEee
Q 043503 345 MHVLSNWIPDSML--EFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 345 ~~~L~~~~~d~~l--~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.. ..++.+...+ ..++.++.++|+|||.+++..
T Consensus 188 d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC-C-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 54 3233322222 689999999999999999864
No 232
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.82 E-value=3.2e-08 Score=103.58 Aligned_cols=135 Identities=11% Similarity=0.136 Sum_probs=91.4
Q ss_pred CCchhHHHHHHHccC--CCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC--eeEEE
Q 043503 258 NGKLDYGIDQVLSMK--PLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL--ISMHI 326 (430)
Q Consensus 258 ~~~~~~~id~lL~~~--p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~ 326 (430)
+......+..++... ++ .+|||+|||+|..+..+++. +..|+++ |+++.+++.++++ |. +.++.
T Consensus 100 Qd~~s~l~~~~L~~~~~~g---~~VLDl~aGpG~kt~~lA~~~~~~g~V~av--Dis~~~l~~~~~n~~r~g~~nv~~~~ 174 (479)
T 2frx_A 100 QEASSMLPVAALFADGNAP---QRVMDVAAAPGSKTTQISARMNNEGAILAN--EFSASRVKVLHANISRCGISNVALTH 174 (479)
T ss_dssp CCHHHHHHHHHHTTTTCCC---SEEEESSCTTSHHHHHHHHHTTTCSEEEEE--CSSHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred ECHHHHHHHHHhCcccCCC---CEEEEeCCCCCHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCcEEEEe
Confidence 343344444555544 43 35699999999999999986 3688888 7778888776654 54 78888
Q ss_pred cccccCCC-CCCceeEEEEc------cchhhcCCc--------------hhHHHHHHHHHHhccCCcEEEEeeccccCcC
Q 043503 327 SVSQRLPF-FENTLDIVHSM------HVLSNWIPD--------------SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ 385 (430)
Q Consensus 327 ~d~~~lpf-~d~sfDlV~~~------~~L~~~~~d--------------~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~ 385 (430)
+|+..++. .+++||+|++. ..+.. .++ .....+|.++.++|||||++++++......+
T Consensus 175 ~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~-~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~E 253 (479)
T 2frx_A 175 FDGRVFGAAVPEMFDAILLDAPCSGEGVVRK-DPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEE 253 (479)
T ss_dssp CCSTTHHHHSTTCEEEEEEECCCCCGGGGGT-CTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTT
T ss_pred CCHHHhhhhccccCCEEEECCCcCCcccccC-CHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCccc
Confidence 89887764 56789999982 11211 111 0135689999999999999999864433333
Q ss_pred cHHHHHHHHHHcC
Q 043503 386 LNETYVPMLDRIG 398 (430)
Q Consensus 386 ~~~~~~~ll~~~G 398 (430)
-.+.+..++++.+
T Consensus 254 ne~vv~~~l~~~~ 266 (479)
T 2frx_A 254 NEAVCLWLKETYP 266 (479)
T ss_dssp THHHHHHHHHHST
T ss_pred CHHHHHHHHHHCC
Confidence 3345666677665
No 233
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.80 E-value=2.7e-08 Score=102.51 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=89.1
Q ss_pred HHHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C--CeeEEEccccc----CC
Q 043503 264 GIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQR----LP 333 (430)
Q Consensus 264 ~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~----lp 333 (430)
.++.++.........+|||+|||+|.++..+++.+.+|+++ |+++.+++.|+++ | .+.++.+|+.. ++
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gv--D~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGV--EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEE--ESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEE--eCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh
Confidence 34455443332233467999999999999999998899998 6678888777654 4 38899999866 44
Q ss_pred CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 334 FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 334 f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
+.+++||+|++...... ...++..+. .++|++.++++ |....+.++. ..+.+.||+..+..
T Consensus 352 ~~~~~fD~Vv~dPPr~g------~~~~~~~l~-~~~p~~ivyvs---c~p~tlard~-~~l~~~Gy~~~~~~ 412 (433)
T 1uwv_A 352 WAKNGFDKVLLDPARAG------AAGVMQQII-KLEPIRIVYVS---CNPATLARDS-EALLKAGYTIARLA 412 (433)
T ss_dssp GGTTCCSEEEECCCTTC------CHHHHHHHH-HHCCSEEEEEE---SCHHHHHHHH-HHHHHTTCEEEEEE
T ss_pred hhcCCCCEEEECCCCcc------HHHHHHHHH-hcCCCeEEEEE---CChHHHHhhH-HHHHHCCcEEEEEE
Confidence 56788999999543311 223444444 37899999886 5444444444 45667899988754
No 234
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.80 E-value=2e-08 Score=100.15 Aligned_cols=113 Identities=10% Similarity=0.052 Sum_probs=83.3
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
.+|||+|||+|.++.. ++.+.+|+++ |+++.+++.++++ + .+.++.+|+..+. ++||+|++.... .
T Consensus 197 ~~VLDlg~G~G~~~l~-a~~~~~V~~v--D~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~-~ 269 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CKNAKKIYAI--DINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK-F 269 (336)
T ss_dssp CEEEETTCTTSHHHHH-TTTSSEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT-T
T ss_pred CEEEEccCccCHHHHh-ccCCCEEEEE--ECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH-h
Confidence 4569999999999999 8867789998 6667777766654 4 3889999988765 789999995322 1
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHc-CCEEEEEEec
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRI-GFKKLRWNVG 407 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~-Gfk~l~~~~~ 407 (430)
...++..+.++|+|||.+++..+... .+...+.+.+. ||+.......
T Consensus 270 ------~~~~l~~~~~~L~~gG~l~~~~~~~~----~~~~~~~l~~~~~~~i~~~~~v 317 (336)
T 2yx1_A 270 ------AHKFIDKALDIVEEGGVIHYYTIGKD----FDKAIKLFEKKCDCEVLEKRIV 317 (336)
T ss_dssp ------GGGGHHHHHHHEEEEEEEEEEEEESS----SHHHHHHHHHHSEEEEEEEEEE
T ss_pred ------HHHHHHHHHHHcCCCCEEEEEEeecC----chHHHHHHHHhcCCcEEEEEEE
Confidence 23678899999999999998765533 34455556665 7776554433
No 235
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.79 E-value=1.6e-08 Score=103.26 Aligned_cols=123 Identities=18% Similarity=0.132 Sum_probs=82.5
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccC-CCCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRL-PFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~l-pf~d~sfDlV~~~~~L~~~ 351 (430)
.+|||+|||+|.++..++..|..|+++ |+++.+++.++++ |. ..+.++|+..+ +...+.||+|++.......
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~V~av--Dis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAYALAV--DKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CeEEEcccchhHHHHHHHHcCCeEEEE--ECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 456999999999999999999888887 7778888777654 54 35678887553 2223449999995332110
Q ss_pred CC------chhHHHHHHHHHHhccCCcEEEEeeccccCc--CcHHHHHHHHHHcCCEEE
Q 043503 352 IP------DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS--QLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 352 ~~------d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~--~~~~~~~~ll~~~Gfk~l 402 (430)
.. ......++..+.++|+|||++++........ ...+.+...+.+.|.+..
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLR 352 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEE
Confidence 00 0124678999999999999998765332211 123455666667776543
No 236
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.79 E-value=1.3e-08 Score=103.42 Aligned_cols=125 Identities=10% Similarity=-0.004 Sum_probs=84.7
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C----CeeEEEccccc-CCC---CCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G----LISMHISVSQR-LPF---FENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g----~i~~~~~d~~~-lpf---~d~sfDlV~~ 344 (430)
.+|||+|||+|.++..++..++ +|+++ |+++.+++.|+++ | .+.++++|+.. ++. ...+||+|++
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~v--D~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSV--DLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEE--ESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 4579999999999999999875 89998 5567777766544 4 57899998755 231 2458999999
Q ss_pred ccchh----hcCCc--hhHHHHHHHHHHhccCCcEEEEeeccccC--cCcHHHHHHHHHHcCCEEEEE
Q 043503 345 MHVLS----NWIPD--SMLEFTLYDIYRLLRPGGIFWLDRFFCFG--SQLNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 345 ~~~L~----~~~~d--~~l~~~L~ei~RvLrPGG~lvl~~f~~~~--~~~~~~~~~ll~~~Gfk~l~~ 404 (430)
..... ....+ .....++.++.++|+|||.++++.....- ....+.+...+.+.|.+++..
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 359 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDL 359 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 53331 11222 12445788889999999999997533211 112344556677788885543
No 237
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.79 E-value=1.2e-08 Score=99.19 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=71.4
Q ss_pred cEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc----------------CCeeEEEcccccC-CCCCCce
Q 043503 278 RIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR----------------GLISMHISVSQRL-PFFENTL 339 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r----------------g~i~~~~~d~~~l-pf~d~sf 339 (430)
++|||||||+|.++..+++++ .+|+++ |+++.+++.|+++ ..+.++.+|+... +. +++|
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~v~~v--Did~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDVDEVIMV--EIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCCSEEEEE--ESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CeEEEEcCCcCHHHHHHHhCCCCEEEEE--ECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 567999999999999999884 588888 6668888877654 2378888886542 23 6789
Q ss_pred eEEEEccchhhcCCchh--HHHHHHHHHHhccCCcEEEEee
Q 043503 340 DIVHSMHVLSNWIPDSM--LEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 340 DlV~~~~~L~~~~~d~~--l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
|+|++.... ++.+... ...++.++.++|+|||.+++..
T Consensus 154 D~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999995432 2222111 2678999999999999999863
No 238
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.78 E-value=2.8e-08 Score=97.62 Aligned_cols=113 Identities=14% Similarity=0.068 Sum_probs=78.0
Q ss_pred cEEEEEcC------CccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhcCCeeE-EEcccccCCCCCCceeEEEEccc
Q 043503 278 RIGLDIGG------GTGTFAARMRER---NVTIITTSLNLDGPFNSFIASRGLISM-HISVSQRLPFFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGc------GtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~rg~i~~-~~~d~~~lpf~d~sfDlV~~~~~ 347 (430)
.+|||+|| |+|+ ..++++ +.+|+++|++.. + ..+.+ +++|+..++++ ++||+|+++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~---v------~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~ 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF---V------SDADSTLIGDCATVHTA-NKWDLIISDMY 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC---B------CSSSEEEESCGGGCCCS-SCEEEEEECCC
T ss_pred CEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC---C------CCCEEEEECccccCCcc-CcccEEEEcCC
Confidence 45799999 5576 333433 479999966543 1 23788 99999887754 68999999532
Q ss_pred hh---hcC-----CchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 348 LS---NWI-----PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 348 L~---~~~-----~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
.. ++. .......++.++.|+|||||.|++..+... ....+.+++++.||..++..
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~---~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS---WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS---CCHHHHHHHTTEEEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC---CHHHHHHHHHHcCCcEEEEE
Confidence 10 110 122356799999999999999999765422 23467788899999877654
No 239
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.76 E-value=3.3e-08 Score=100.53 Aligned_cols=123 Identities=11% Similarity=-0.074 Sum_probs=84.3
Q ss_pred cEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc----C----CeeEEEcccccCCC----CCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR----G----LISMHISVSQRLPF----FENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r----g----~i~~~~~d~~~lpf----~d~sfDlV~~ 344 (430)
.+|||+|||+|.++..+++.| .+|+++ |+++.+++.|+++ | .+.++.+|+..+.. .+.+||+|++
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~~V~~v--D~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCSQVVSV--DTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 456999999999999999986 489988 6677777776644 4 36888998766431 1468999999
Q ss_pred ccchhhc------CCchhHHHHHHHHHHhccCCcEEEEeeccccCc--CcHHHHHHHHHHcCCEEE
Q 043503 345 MHVLSNW------IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS--QLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 345 ~~~L~~~------~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~--~~~~~~~~ll~~~Gfk~l 402 (430)
....... ........++.++.++|+|||+++++.....-. ...+.+.+.+.+.|++..
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 365 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQ 365 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEE
Confidence 6432110 001247789999999999999999865221111 123345557778886543
No 240
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.74 E-value=3.2e-08 Score=100.15 Aligned_cols=121 Identities=12% Similarity=0.012 Sum_probs=83.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccCCC----CCCceeEEEEccc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRLPF----FENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~lpf----~d~sfDlV~~~~~ 347 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.++++ |. +.++.+|+..+.. .+++||+|++...
T Consensus 211 ~~VLDlg~G~G~~~~~la~~~~~v~~v--D~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALGFREVVAV--DSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHHEEEEEEE--ESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeeeccCHHHHHHHHhCCEEEEE--ECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 467999999999999999887788888 6678888777654 43 7899998766431 2578999999532
Q ss_pred hhhcCCc------hhHHHHHHHHHHhccCCcEEEEeeccccCcC--cHHHHHHHHHHcCCE
Q 043503 348 LSNWIPD------SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQ--LNETYVPMLDRIGFK 400 (430)
Q Consensus 348 L~~~~~d------~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~--~~~~~~~ll~~~Gfk 400 (430)
....... .....++.++.++|+|||.++++........ ..+.+.+.+.+.|.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 349 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRL 349 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCC
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCe
Confidence 2110000 2356789999999999999998753321111 223455567777754
No 241
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.70 E-value=2.3e-08 Score=96.51 Aligned_cols=88 Identities=13% Similarity=0.076 Sum_probs=69.5
Q ss_pred ccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----------CCeeEEEcccccCCCCCCceeEEEEcc
Q 043503 277 IRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----------GLISMHISVSQRLPFFENTLDIVHSMH 346 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----------g~i~~~~~d~~~lpf~d~sfDlV~~~~ 346 (430)
.++|||||||+|.++..+++.+.+|+++ |+++.+++.|+++ ..+.++.+|+..+. ++||+|++..
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~~v~~v--eid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDTHIDFV--QADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ 147 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSCEEEEE--CSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS
T ss_pred CCEEEEEeCCcCHHHHHHHhCCCEEEEE--ECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC
Confidence 3578999999999999998876677877 6778888777643 24788888887654 7899999951
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
.+ ...++.++.++|+|||.+++.
T Consensus 148 ------~d--p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 148 ------EP--DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp ------CC--CHHHHHHHHTTEEEEEEEEEE
T ss_pred ------CC--hHHHHHHHHHhcCCCcEEEEE
Confidence 22 234899999999999999885
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.69 E-value=3.6e-08 Score=96.75 Aligned_cols=90 Identities=20% Similarity=0.238 Sum_probs=64.1
Q ss_pred ccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----C--CeeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 277 IRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----G--LISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g--~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
..+|||+|||+|.++..+++++.+|+++ |+++.+++.++++ + .+.++.+|+..+++ .+||+|+++... +
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~~~~v~~v--Di~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~~~D~Vv~n~py-~ 117 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPLAKKVITI--DIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF--PKFDVCTANIPY-K 117 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTTSSEEEEE--CSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--CCCSEEEEECCG-G
T ss_pred cCEEEEEcCcCcHHHHHHHhcCCEEEEE--ECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--ccCCEEEEcCCc-c
Confidence 3467999999999999999998899998 6778888777654 3 47888999888775 379999996554 4
Q ss_pred cCCchhHHHHH---------------HHHHHhccCCc
Q 043503 351 WIPDSMLEFTL---------------YDIYRLLRPGG 372 (430)
Q Consensus 351 ~~~d~~l~~~L---------------~ei~RvLrPGG 372 (430)
+..+ .+..++ ..+.|+++|+|
T Consensus 118 ~~~~-~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 118 ISSP-LIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp GHHH-HHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred cccH-HHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 4322 233344 34678888877
No 243
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.68 E-value=4.3e-08 Score=99.53 Aligned_cols=122 Identities=14% Similarity=-0.015 Sum_probs=83.0
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C---CeeEEEcccccCCC----CCCceeEEEEc
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G---LISMHISVSQRLPF----FENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g---~i~~~~~d~~~lpf----~d~sfDlV~~~ 345 (430)
.+|||+|||+|.++..+++.|. +|+++ |+++.+++.++++ | .+.++.+|+..+.. .+++||+|++.
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~~v~~v--D~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGADEVIGI--DKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEecCCCCHHHHHHHHCCCCEEEEE--eCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 4579999999999999999865 89998 6678777766544 4 47889998765431 25789999995
Q ss_pred cchhhcCC------chhHHHHHHHHHHhccCCcEEEEeeccccCc-C-cHHHHHHHHHHcCCEE
Q 043503 346 HVLSNWIP------DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-Q-LNETYVPMLDRIGFKK 401 (430)
Q Consensus 346 ~~L~~~~~------d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-~-~~~~~~~ll~~~Gfk~ 401 (430)
........ ......++.++.++|+|||.+++......-. + ..+.+...+.+.|...
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFL 360 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 33211000 0236778999999999999998875321111 1 2233445666677554
No 244
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.65 E-value=5.8e-08 Score=106.07 Aligned_cols=120 Identities=14% Similarity=0.096 Sum_probs=84.4
Q ss_pred cEEEEEcCCccHHHHHHHHcCC-EEEEEecCCChhHHHHHHhc----C----CeeEEEccccc-CCCCCCceeEEEEccc
Q 043503 278 RIGLDIGGGTGTFAARMRERNV-TIITTSLNLDGPFNSFIASR----G----LISMHISVSQR-LPFFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~r----g----~i~~~~~d~~~-lpf~d~sfDlV~~~~~ 347 (430)
.+|||+|||+|.++..++..|. +|+++ |+++.+++.++++ | .+.++++|+.. ++..+++||+|++...
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~~V~aV--D~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGARSTTTV--DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCCCEEEEE--eCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 3569999999999999998876 58888 7778888877654 3 37889998765 4445678999999543
Q ss_pred hhh--------cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 348 LSN--------WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 348 L~~--------~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
... +........++.++.++|+|||+|+++.-...-. . -.+.+.+.||+...
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~-~---~~~~l~~~g~~~~~ 678 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR-M---DLDGLAKLGLKAQE 678 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCC-C---CHHHHHHTTEEEEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccc-c---CHHHHHHcCCceee
Confidence 210 0111236678999999999999999864221111 1 13567788987544
No 245
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.63 E-value=1.7e-07 Score=89.07 Aligned_cols=78 Identities=14% Similarity=0.220 Sum_probs=60.0
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCC-Cce
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFE-NTL 339 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d-~sf 339 (430)
++.++.........+|||+|||+|.++..+++++.+|+++ |+++.+++.++++ +.+.++.+|+..+++++ ..|
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~v--D~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 96 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAI--EIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY 96 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEE--CSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEE--ECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe
Confidence 4555555443444567999999999999999999999998 7778898888765 35899999999988764 456
Q ss_pred eEEEEc
Q 043503 340 DIVHSM 345 (430)
Q Consensus 340 DlV~~~ 345 (430)
.|+++
T Consensus 97 -~vv~n 101 (244)
T 1qam_A 97 -KIFGN 101 (244)
T ss_dssp -EEEEE
T ss_pred -EEEEe
Confidence 45553
No 246
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.63 E-value=1.5e-07 Score=91.13 Aligned_cols=137 Identities=9% Similarity=0.115 Sum_probs=90.9
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccCCCCCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRLPFFEN 337 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~lpf~d~ 337 (430)
.+.++...+. ..+|||+|||+|.++..++.. ..+++++ |+++.+++.++++ |. ..+.+.|...-+ +..
T Consensus 123 Y~~i~~~i~~--p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~--DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~ 197 (281)
T 3lcv_B 123 YRELFRHLPR--PNTLRDLACGLNPLAAPWMGLPAETVYIAS--DIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDE 197 (281)
T ss_dssp HHHHGGGSCC--CSEEEETTCTTGGGCCTTTTCCTTCEEEEE--ESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCS
T ss_pred HHHHHhccCC--CceeeeeccCccHHHHHHHhhCCCCEEEEE--eCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCC
Confidence 3445555432 456799999999999999877 5789998 5558888877665 54 566677765433 567
Q ss_pred ceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeec--cc-cCcCcHH----HHHHHHHHcCCEEEEEEecc
Q 043503 338 TLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF--FC-FGSQLNE----TYVPMLDRIGFKKLRWNVGM 408 (430)
Q Consensus 338 sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f--~~-~~~~~~~----~~~~ll~~~Gfk~l~~~~~~ 408 (430)
.||+|++.-++++ .+++.....+ ++...|+|||.|+--.- +. ....+.+ .|...+...|....+.+.+.
T Consensus 198 ~~DvaL~lkti~~-Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~n 273 (281)
T 3lcv_B 198 PADVTLLLKTLPC-LETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGN 273 (281)
T ss_dssp CCSEEEETTCHHH-HHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcchHHHHHHHHH-hhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecC
Confidence 8999999888855 4332233344 99999999998875432 11 1112333 45555666888777766554
No 247
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.61 E-value=2.6e-07 Score=93.65 Aligned_cols=116 Identities=14% Similarity=0.049 Sum_probs=78.8
Q ss_pred cEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcC--
Q 043503 278 RIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWI-- 352 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~-- 352 (430)
.+|||+|||+|.++..++++ +.+++++|+| +.+.+.| ..+.++++|+...+ ++++||+|+++.......
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~--~~~~~~a---~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAYRFVGVEID--PKALDLP---PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESC--TTTCCCC---TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCT
T ss_pred CEEEECCCCChHHHHHHHHHhCCCCeEEEEECC--HHHHHhC---CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccc
Confidence 36799999999999999985 5789999665 4444444 34788899987765 357899999964332111
Q ss_pred -------Cch-----------------hHHHHHHHHHHhccCCcEEEEeeccc-cCcCcHHHHHHHHHHcCC
Q 043503 353 -------PDS-----------------MLEFTLYDIYRLLRPGGIFWLDRFFC-FGSQLNETYVPMLDRIGF 399 (430)
Q Consensus 353 -------~d~-----------------~l~~~L~ei~RvLrPGG~lvl~~f~~-~~~~~~~~~~~ll~~~Gf 399 (430)
++. ....++..+.++|+|||.+++..... ......+.+.+.+.+.|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 111 12267899999999999988754221 111223567777777776
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.61 E-value=1.3e-07 Score=97.48 Aligned_cols=111 Identities=12% Similarity=0.168 Sum_probs=77.3
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccCCCCCCceeEEEEccchhhcC
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRLPFFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~ 352 (430)
.+|||+|||+|.++..+++.+.+|+++ |+++.+++.|+++ |. +.++.+|+..+.. .+||+|++...... .
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~~~V~gv--D~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g-~ 366 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRGFNVKGF--DSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAG-L 366 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTC-S
T ss_pred CEEEEeeccchHHHHHHHHcCCEEEEE--ECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccc-h
Confidence 457999999999999999998899998 6678888777654 44 7899999887652 28999999544311 1
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
...++..+ +.|+|||.++++ |....+.+++.. ..|++.+..
T Consensus 367 ----~~~~~~~l-~~l~p~givyvs---c~p~tlarDl~~----l~y~l~~~~ 407 (425)
T 2jjq_A 367 ----HPRLVKRL-NREKPGVIVYVS---CNPETFARDVKM----LDYRIDEIV 407 (425)
T ss_dssp ----CHHHHHHH-HHHCCSEEEEEE---SCHHHHHHHHHH----SSCCEEEEE
T ss_pred ----HHHHHHHH-HhcCCCcEEEEE---CChHHHHhHHhh----CeEEEEEEE
Confidence 12344444 459999999996 433333333332 227776654
No 249
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.61 E-value=2.6e-07 Score=91.93 Aligned_cols=121 Identities=16% Similarity=0.151 Sum_probs=82.8
Q ss_pred ccEEEEEcCCccHHHHHHHHcC-------CEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccCCCCCCceeEEEE
Q 043503 277 IRIGLDIGGGTGTFAARMRERN-------VTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRLPFFENTLDIVHS 344 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g-------~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~lpf~d~sfDlV~~ 344 (430)
..+|||+|||+|.++..+++.. .+++|+ |+++.+.+.|+.+ |. +.++.+|... +.++++||+|++
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~Gi--Di~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGV--DVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEE--ESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEE--ECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEE
Confidence 3567999999999999988762 678888 5667777776654 44 6788888654 234678999999
Q ss_pred ccchhhcCCchh----------------HHHHHHHHHHhccCCcEEEEeeccc-cCcCcHHHHHHHHHHcCCEE
Q 043503 345 MHVLSNWIPDSM----------------LEFTLYDIYRLLRPGGIFWLDRFFC-FGSQLNETYVPMLDRIGFKK 401 (430)
Q Consensus 345 ~~~L~~~~~d~~----------------l~~~L~ei~RvLrPGG~lvl~~f~~-~~~~~~~~~~~ll~~~Gfk~ 401 (430)
+..+..+ +... ...++..+.+.|+|||++++...-. ........+.+.+.+.|+..
T Consensus 208 NPPfg~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 208 DLPVGYY-PDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIE 280 (344)
T ss_dssp ECCCSEE-SCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEE
T ss_pred CCCCCCc-CchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEE
Confidence 8776433 2211 1258999999999999988764211 11122355666677766643
No 250
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.59 E-value=7.5e-09 Score=98.20 Aligned_cols=96 Identities=11% Similarity=0.159 Sum_probs=67.8
Q ss_pred CccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCC-CceeEEEEccchhh
Q 043503 276 TIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFE-NTLDIVHSMHVLSN 350 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d-~sfDlV~~~~~L~~ 350 (430)
...+|||+|||+|.++..+++++.+|+++ |+++.+++.++++ ..+.++.+|+..+++++ ++| .|+++... +
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~~~v~~i--d~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py-~ 104 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKISKQVTSI--ELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPY-H 104 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHSSEEEES--SSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCS-S
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCeEEEE--ECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCc-c
Confidence 34567999999999999999999899988 5566666666544 23788899999988764 689 66664322 1
Q ss_pred cCCchhH----------HHHH----HHHHHhccCCcEEEE
Q 043503 351 WIPDSML----------EFTL----YDIYRLLRPGGIFWL 376 (430)
Q Consensus 351 ~~~d~~l----------~~~L----~ei~RvLrPGG~lvl 376 (430)
...... ..++ ..+.|+|+|||.+.+
T Consensus 105 -~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 105 -LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp -SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred -ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 111111 1233 669999999998754
No 251
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.56 E-value=2.5e-07 Score=88.49 Aligned_cols=96 Identities=14% Similarity=0.070 Sum_probs=70.1
Q ss_pred CccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CC-eeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 276 TIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GL-ISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
...+|||+|||+|.++..++ .+.+++++ |+++.+++.++++ |. ..+.+.|....+.+ ++||+|+..-++++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~-~~~~y~a~--DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~ 180 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER-GIASVWGC--DIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPL 180 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT-TCSEEEEE--ESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHH
T ss_pred CCCeEEEecCCccHHHHHhc-cCCeEEEE--eCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHH
Confidence 34567999999999999988 67799998 5568888877655 43 66778888776654 48999999866643
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
..+... ....++.+.|+++|.++-.
T Consensus 181 -LE~q~~-~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 181 -LEREQA-GSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp -HHHHST-THHHHHHHHCBCSEEEEEE
T ss_pred -hhhhch-hhHHHHHHHhcCCCEEEEc
Confidence 322112 2344888899999887653
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.54 E-value=2.1e-07 Score=91.56 Aligned_cols=82 Identities=11% Similarity=0.192 Sum_probs=64.0
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCCCcee
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFENTLD 340 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d~sfD 340 (430)
++.++.........+|||||||+|.++..+++++.+|+++ |+++.+++.++++ +.+.++.+|+..+++++.+||
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aV--Eid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD 116 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVI--EIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFN 116 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEE--ESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCS
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEE--ECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCcc
Confidence 3444443333334567999999999999999999999999 5557788777655 568999999999988888899
Q ss_pred EEEEccch
Q 043503 341 IVHSMHVL 348 (430)
Q Consensus 341 lV~~~~~L 348 (430)
+|+++...
T Consensus 117 ~Iv~NlPy 124 (295)
T 3gru_A 117 KVVANLPY 124 (295)
T ss_dssp EEEEECCG
T ss_pred EEEEeCcc
Confidence 99997554
No 253
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.46 E-value=3.6e-07 Score=92.12 Aligned_cols=125 Identities=10% Similarity=0.061 Sum_probs=82.5
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CC--eeEEEcccccCC--CCC
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GL--ISMHISVSQRLP--FFE 336 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d~~~lp--f~d 336 (430)
++.++....... .+|||+|||+|.++..+++...+|+++ |+++.+++.|+++ |. +.++.+|+..+. +..
T Consensus 203 ~~~~~~~~~~~~-~~vLDl~cG~G~~~l~la~~~~~V~gv--d~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~ 279 (369)
T 3bt7_A 203 LEWALDVTKGSK-GDLLELYCGNGNFSLALARNFDRVLAT--EIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG 279 (369)
T ss_dssp HHHHHHHTTTCC-SEEEEESCTTSHHHHHHGGGSSEEEEE--CCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSS
T ss_pred HHHHHHHhhcCC-CEEEEccCCCCHHHHHHHhcCCEEEEE--ECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhh
Confidence 444444443222 457999999999999999877899998 7778888776643 43 788988876542 221
Q ss_pred --------------CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEE
Q 043503 337 --------------NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 337 --------------~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l 402 (430)
.+||+|+...... .+..++.+.|+|+|.+++.. |......+++..+.. ||++.
T Consensus 280 ~~~~~~l~~~~~~~~~fD~Vv~dPPr~---------g~~~~~~~~l~~~g~ivyvs--c~p~t~ard~~~l~~--~y~~~ 346 (369)
T 3bt7_A 280 VREFNRLQGIDLKSYQCETIFVDPPRS---------GLDSETEKMVQAYPRILYIS--CNPETLCKNLETLSQ--THKVE 346 (369)
T ss_dssp CCCCTTGGGSCGGGCCEEEEEECCCTT---------CCCHHHHHHHTTSSEEEEEE--SCHHHHHHHHHHHHH--HEEEE
T ss_pred ccccccccccccccCCCCEEEECcCcc---------ccHHHHHHHHhCCCEEEEEE--CCHHHHHHHHHHHhh--CcEEE
Confidence 3799999843221 12345667777888877653 544444455555442 68877
Q ss_pred EEE
Q 043503 403 RWN 405 (430)
Q Consensus 403 ~~~ 405 (430)
+..
T Consensus 347 ~~~ 349 (369)
T 3bt7_A 347 RLA 349 (369)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.36 E-value=9.4e-07 Score=89.83 Aligned_cols=109 Identities=11% Similarity=0.143 Sum_probs=76.6
Q ss_pred HHHHccCCCCCccEEEEEcCCccHHHHHHHHcC----------------------------------------CEEEEEe
Q 043503 266 DQVLSMKPLGTIRIGLDIGGGTGTFAARMRERN----------------------------------------VTIITTS 305 (430)
Q Consensus 266 d~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g----------------------------------------~~Vv~vd 305 (430)
..++..........+||.|||+|++++.++..+ .+|+|+
T Consensus 185 a~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv- 263 (385)
T 3ldu_A 185 AGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGY- 263 (385)
T ss_dssp HHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEE-
T ss_pred HHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEE-
Confidence 344433332233456999999999999988762 468888
Q ss_pred cCCChhHHHHHHhc----CC---eeEEEcccccCCCCCCceeEEEEccchhhcC-CchhHHHHHHHHHHhccC--CcEEE
Q 043503 306 LNLDGPFNSFIASR----GL---ISMHISVSQRLPFFENTLDIVHSMHVLSNWI-PDSMLEFTLYDIYRLLRP--GGIFW 375 (430)
Q Consensus 306 iD~s~~~le~a~~r----g~---i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~-~d~~l~~~L~ei~RvLrP--GG~lv 375 (430)
|+++.+++.|+++ |. +.+.++|+..++.+ .+||+|+++..+..-. ....+..+..++.++|++ ||.++
T Consensus 264 -Did~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 264 -DIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp -ESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred -ECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 5668888777654 54 88999999888754 5899999976653211 123466778888888887 88877
Q ss_pred Ee
Q 043503 376 LD 377 (430)
Q Consensus 376 l~ 377 (430)
+.
T Consensus 342 ii 343 (385)
T 3ldu_A 342 LI 343 (385)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.35 E-value=1.2e-06 Score=85.15 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=56.8
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc---CCeeEEEcccccCCCCCC-ceeEEEEccch
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR---GLISMHISVSQRLPFFEN-TLDIVHSMHVL 348 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r---g~i~~~~~d~~~lpf~d~-sfDlV~~~~~L 348 (430)
+|||||||+|.++..+++++.+|+++ |+++.|++.++++ +.+.++.+|+..+++++. .+|.|+++...
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~~V~av--Eid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGAEVTAI--EKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVANLPY 120 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTCCEEEE--ESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEEECS
T ss_pred eEEEEeCchHHHHHHHHHcCCEEEEE--ECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEecCcc
Confidence 46999999999999999999999998 5568888888765 458999999998887643 68999996544
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.35 E-value=9.8e-07 Score=90.01 Aligned_cols=97 Identities=12% Similarity=0.107 Sum_probs=70.6
Q ss_pred cEEEEEcCCccHHHHHHHHcC----------------------------------------CEEEEEecCCChhHHHHHH
Q 043503 278 RIGLDIGGGTGTFAARMRERN----------------------------------------VTIITTSLNLDGPFNSFIA 317 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g----------------------------------------~~Vv~vdiD~s~~~le~a~ 317 (430)
..+||.+||+|++++.++..+ .+|+++ |+++.+++.|+
T Consensus 203 ~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv--Did~~al~~Ar 280 (393)
T 3k0b_A 203 RPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGG--DIDARLIEIAK 280 (393)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEE--ESCHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEE--ECCHHHHHHHH
Confidence 456999999999998888652 358888 66688887776
Q ss_pred hc----CC---eeEEEcccccCCCCCCceeEEEEccchhhcC-CchhHHHHHHHHHHhccC--CcEEEEe
Q 043503 318 SR----GL---ISMHISVSQRLPFFENTLDIVHSMHVLSNWI-PDSMLEFTLYDIYRLLRP--GGIFWLD 377 (430)
Q Consensus 318 ~r----g~---i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~-~d~~l~~~L~ei~RvLrP--GG~lvl~ 377 (430)
++ |. +.+.++|+..++.+ .+||+|+++..+..-+ ....+..+..++.++||+ ||.+++.
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 349 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVL 349 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 54 43 88999999888764 5899999985542111 112356677777777776 8888774
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.34 E-value=2.1e-06 Score=87.39 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=72.9
Q ss_pred cEEEEEcCCccHHHHHHHHcC----------------------------------------CEEEEEecCCChhHHHHHH
Q 043503 278 RIGLDIGGGTGTFAARMRERN----------------------------------------VTIITTSLNLDGPFNSFIA 317 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g----------------------------------------~~Vv~vdiD~s~~~le~a~ 317 (430)
..+||.+||+|++++.++..+ .+|+++ |+++.+++.|+
T Consensus 196 ~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~Gv--Did~~al~~Ar 273 (384)
T 3ldg_A 196 KPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGF--DFDGRMVEIAR 273 (384)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEE--ESCHHHHHHHH
T ss_pred CeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEE--ECCHHHHHHHH
Confidence 446999999999998888652 358888 56688887776
Q ss_pred hc----CC---eeEEEcccccCCCCCCceeEEEEccchhhcC-CchhHHHHHHHHHHhccC--CcEEEEe
Q 043503 318 SR----GL---ISMHISVSQRLPFFENTLDIVHSMHVLSNWI-PDSMLEFTLYDIYRLLRP--GGIFWLD 377 (430)
Q Consensus 318 ~r----g~---i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~-~d~~l~~~L~ei~RvLrP--GG~lvl~ 377 (430)
++ |. +.+.++|+..++.+ .+||+|+++..+..-+ ....+..+..++.+.||+ ||.+++.
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 342 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFIL 342 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 54 43 88999999988765 4899999985553222 224567788888888887 8888774
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.33 E-value=8.7e-07 Score=85.21 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=55.5
Q ss_pred ccEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCC----CceeEEEEccch
Q 043503 277 IRIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFE----NTLDIVHSMHVL 348 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d----~sfDlV~~~~~L 348 (430)
..+|||||||+|.++..+++++.+|+++ |+++.|++.++++ +.+.++.+|+..+++++ +.|| |+++...
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~~~V~av--Eid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTECDNLALV--EIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTSSEEEEE--ECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EEEECCH
T ss_pred cCEEEEEcccccHHHHHHHHhCCEEEEE--ECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EEecCCc
Confidence 3457999999999999999999999998 6668888888765 45899999999887643 5688 6665443
No 259
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.30 E-value=1.5e-06 Score=89.62 Aligned_cols=98 Identities=12% Similarity=0.033 Sum_probs=69.9
Q ss_pred cEEEEEcCCccHHHHHHHHc---------------CCEEEEEecCCChhHHHHHHhc----C----CeeEEEcccccCCC
Q 043503 278 RIGLDIGGGTGTFAARMRER---------------NVTIITTSLNLDGPFNSFIASR----G----LISMHISVSQRLPF 334 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~---------------g~~Vv~vdiD~s~~~le~a~~r----g----~i~~~~~d~~~lpf 334 (430)
.+|||.|||+|.+...+++. +.+++|+ |+++.+.+.|+.+ | .+.+.++|+...+.
T Consensus 173 ~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~--Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 173 ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGV--DNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEE--ESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEE--eCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 34699999999999888763 3678888 5557777666543 4 35788888766654
Q ss_pred CCCceeEEEEccchhhcCCc--------------hhHHHHHHHHHHhccCCcEEEEee
Q 043503 335 FENTLDIVHSMHVLSNWIPD--------------SMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 335 ~d~sfDlV~~~~~L~~~~~d--------------~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
. .+||+|+++..+...... .....++..+.+.|+|||++.+..
T Consensus 251 ~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 251 S-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp S-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 3 489999998666431110 012368999999999999987654
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.29 E-value=8.5e-06 Score=80.41 Aligned_cols=139 Identities=11% Similarity=0.030 Sum_probs=85.5
Q ss_pred CCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc----CC--eeEEEcc
Q 043503 258 NGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR----GL--ISMHISV 328 (430)
Q Consensus 258 ~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r----g~--i~~~~~d 328 (430)
+......+..++...++. +|||+|||+|..+..+++. ..+|+++ |+++.+++.++++ |. +.++.+|
T Consensus 87 Qd~~s~l~~~~l~~~~g~---~VLDlcaG~G~kt~~la~~~~~~g~V~a~--D~~~~~l~~~~~n~~r~g~~~v~~~~~D 161 (309)
T 2b9e_A 87 QDRASCLPAMLLDPPPGS---HVIDACAAPGNKTSHLAALLKNQGKIFAF--DLDAKRLASMATLLARAGVSCCELAEED 161 (309)
T ss_dssp CCTGGGHHHHHHCCCTTC---EEEESSCTTCHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred ECHHHHHHHHHhCCCCCC---EEEEeCCChhHHHHHHHHHhCCCCEEEEE--eCCHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 333344455566555544 4699999999999999985 3689988 5567777666544 54 7888999
Q ss_pred cccCCCCC---CceeEEEEc------cchhh-----c----CCch------hHHHHHHHHHHhccCCcEEEEeeccccCc
Q 043503 329 SQRLPFFE---NTLDIVHSM------HVLSN-----W----IPDS------MLEFTLYDIYRLLRPGGIFWLDRFFCFGS 384 (430)
Q Consensus 329 ~~~lpf~d---~sfDlV~~~------~~L~~-----~----~~d~------~l~~~L~ei~RvLrPGG~lvl~~f~~~~~ 384 (430)
+..++..+ .+||.|++. ..+.. | .++. ....+|..+.+.|+ ||+++.++-.....
T Consensus 162 ~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~ 240 (309)
T 2b9e_A 162 FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQE 240 (309)
T ss_dssp GGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGG
T ss_pred hHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChH
Confidence 87775432 579999972 11211 0 1110 12346777888886 99988765322222
Q ss_pred CcHHHHHHHHHHc-C-CEEE
Q 043503 385 QLNETYVPMLDRI-G-FKKL 402 (430)
Q Consensus 385 ~~~~~~~~ll~~~-G-fk~l 402 (430)
+-.+.+...+++. + |+.+
T Consensus 241 Ene~~v~~~l~~~~~~~~~~ 260 (309)
T 2b9e_A 241 ENEDVVRDALQQNPGAFRLA 260 (309)
T ss_dssp GTHHHHHHHHTTSTTTEEEC
T ss_pred HhHHHHHHHHHhCCCcEEEe
Confidence 2234566666654 4 6654
No 261
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.25 E-value=1.9e-06 Score=83.62 Aligned_cols=126 Identities=14% Similarity=0.033 Sum_probs=72.7
Q ss_pred cEEEEEcCCccHHHHHHHHc-CC-EEEEEecCCChhHHHHHHh---cC-CeeEEEcccccCCCCCCceeEEEEccchh--
Q 043503 278 RIGLDIGGGTGTFAARMRER-NV-TIITTSLNLDGPFNSFIAS---RG-LISMHISVSQRLPFFENTLDIVHSMHVLS-- 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~---rg-~i~~~~~d~~~lpf~d~sfDlV~~~~~L~-- 349 (430)
.+|||+|||+|.|+..++++ ++ .+.++|+.. .+...... .| .+..+..+++...++++.||+|+|.....
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv--Dl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG 153 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR--DGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESSS 153 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC--TTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCcceeEEEec--cCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccCcC
Confidence 46799999999999998876 44 455553321 11000000 11 13334555555567788999999964331
Q ss_pred -hcCCchhHHHHHHHHHHhccCC-cEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEec
Q 043503 350 -NWIPDSMLEFTLYDIYRLLRPG-GIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 350 -~~~~d~~l~~~L~ei~RvLrPG-G~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
++.+......+|..+.++|+|| |.|++.-|-..+++..+ +...+++. |+.+....+
T Consensus 154 ~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~-l~~~lk~~-F~~V~~~KP 211 (277)
T 3evf_A 154 SSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLE-KLELLQRR-FGGTVIRNP 211 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHH-HHHHHHHH-HCCEEECCT
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHH-HHHHHHHh-cCCEEEEeC
Confidence 1332212223578889999999 99999655533444333 33333332 555554433
No 262
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.18 E-value=3.6e-06 Score=84.92 Aligned_cols=101 Identities=15% Similarity=0.070 Sum_probs=70.4
Q ss_pred CccEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhcC--------------CeeEEEcccccCCC----CC
Q 043503 276 TIRIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASRG--------------LISMHISVSQRLPF----FE 336 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~rg--------------~i~~~~~d~~~lpf----~d 336 (430)
..++|||||||+|.++..+++.+ .+|+.+ |+++.+++.|+++- .+.++.+|+..+-- .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~V--EID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEE--ESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 45678999999999999999885 567777 66688888887651 36888888765431 35
Q ss_pred CceeEEEEccchhhc--CCc-hhHHHHHHHH----HHhccCCcEEEEee
Q 043503 337 NTLDIVHSMHVLSNW--IPD-SMLEFTLYDI----YRLLRPGGIFWLDR 378 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~--~~d-~~l~~~L~ei----~RvLrPGG~lvl~~ 378 (430)
++||+|+....-... .+. -....++..+ .++|+|||.+++..
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 789999994321011 111 0124556666 89999999998753
No 263
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.11 E-value=1.6e-05 Score=76.01 Aligned_cols=80 Identities=14% Similarity=0.169 Sum_probs=58.1
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHcC-CEEEEEecCCChhHHHHHHhc--CCeeEEEcccccCCCCCCc-ee
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERN-VTIITTSLNLDGPFNSFIASR--GLISMHISVSQRLPFFENT-LD 340 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g-~~Vv~vdiD~s~~~le~a~~r--g~i~~~~~d~~~lpf~d~s-fD 340 (430)
++.++.........+|||||||+|.++..+++++ .+|+++ |+++.+++.++++ ..+.++.+|+..+++++.. ..
T Consensus 20 ~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~av--Eid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 20 LKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVI--ELDREMVENLKSIGDERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEE--CCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSE
T ss_pred HHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEE--ECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCc
Confidence 3444444443344567999999999999999995 899998 6778999888876 3378999999998876421 22
Q ss_pred EEEEcc
Q 043503 341 IVHSMH 346 (430)
Q Consensus 341 lV~~~~ 346 (430)
.|+++.
T Consensus 98 ~vv~Nl 103 (249)
T 3ftd_A 98 KVVGNL 103 (249)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 555543
No 264
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.08 E-value=4.9e-06 Score=84.43 Aligned_cols=91 Identities=15% Similarity=0.089 Sum_probs=66.5
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHH----hc---------------CC--eeEEEcccccCCC
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIA----SR---------------GL--ISMHISVSQRLPF 334 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~----~r---------------g~--i~~~~~d~~~lpf 334 (430)
.+|||+|||+|.++..++.+ +.+|+++ |+++.+++.++ .+ |. +.++.+|+..+..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~~~~V~av--Di~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETPAEEVWLN--DISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSSCSEEEEE--ESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CEEEECCCchhHHHHHHHHhCCCCeEEEE--ECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 34699999999999999987 4688888 55566665554 33 43 7788888765431
Q ss_pred -CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 335 -FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 335 -~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
..+.||+|+... . . ....++..+.+.|+|||.++++
T Consensus 127 ~~~~~fD~I~lDP-~---~---~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F---G---SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HSTTCEEEEEECC-S---S---CCHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-C---C---CHHHHHHHHHHhcCCCCEEEEE
Confidence 145799999732 2 1 1356889999999999998886
No 265
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.04 E-value=4.5e-06 Score=81.29 Aligned_cols=70 Identities=17% Similarity=0.161 Sum_probs=53.9
Q ss_pred ccEEEEEcCCccHHHHHHHHcCCE----EEEEecCCChhHHHHHHhc--CCeeEEEcccccCCCCCC------ceeEEEE
Q 043503 277 IRIGLDIGGGTGTFAARMRERNVT----IITTSLNLDGPFNSFIASR--GLISMHISVSQRLPFFEN------TLDIVHS 344 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~g~~----Vv~vdiD~s~~~le~a~~r--g~i~~~~~d~~~lpf~d~------sfDlV~~ 344 (430)
..+|||||||+|.++..+++++.. |+++ |+++.|++.++++ ..+.++++|+..+++++- ..+.|++
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~~~~~~V~av--Did~~~l~~a~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~ 120 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLATPGSPLHAV--ELDRDLIGRLEQRFGELLELHAGDALTFDFGSIARPGDEPSLRIIG 120 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEE--ECCHHHHHHHHHHHGGGEEEEESCGGGCCGGGGSCSSSSCCEEEEE
T ss_pred cCEEEEEccccHHHHHHHHHhCCCcCCeEEEE--ECCHHHHHHHHHhcCCCcEEEECChhcCChhHhcccccCCceEEEE
Confidence 345799999999999999998766 9998 6668899888776 458999999998886532 2346666
Q ss_pred ccch
Q 043503 345 MHVL 348 (430)
Q Consensus 345 ~~~L 348 (430)
+...
T Consensus 121 NlPY 124 (279)
T 3uzu_A 121 NLPY 124 (279)
T ss_dssp ECCH
T ss_pred ccCc
Confidence 5433
No 266
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.03 E-value=3.2e-05 Score=78.62 Aligned_cols=102 Identities=17% Similarity=0.140 Sum_probs=63.1
Q ss_pred cEEEEEcCCccHHHHHHHHc-------------------CCEEEEEecCCC---------hhHHHHH-HhcCC---eeEE
Q 043503 278 RIGLDIGGGTGTFAARMRER-------------------NVTIITTSLNLD---------GPFNSFI-ASRGL---ISMH 325 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-------------------g~~Vv~vdiD~s---------~~~le~a-~~rg~---i~~~ 325 (430)
-+|+|+||++|..+..+... ..+|...|+-.. +.+.+.. ++.|. .-|+
T Consensus 54 ~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~ 133 (384)
T 2efj_A 54 FKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLI 133 (384)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEE
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEE
Confidence 35699999999888776654 134445533110 1122222 22232 2344
Q ss_pred Ecc---cccCCCCCCceeEEEEccchhhcCCch--h-----------------------------------HHHHHHHHH
Q 043503 326 ISV---SQRLPFFENTLDIVHSMHVLSNWIPDS--M-----------------------------------LEFTLYDIY 365 (430)
Q Consensus 326 ~~d---~~~lpf~d~sfDlV~~~~~L~~~~~d~--~-----------------------------------l~~~L~ei~ 365 (430)
.+. +..-.||++++|+|+++.++ ||+.+. . +..+|.-..
T Consensus 134 ~gvpgSFy~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 134 GAMPGSFYSRLFPEESMHFLHSCYCL-HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EECCSCTTSCCSCTTCEEEEEEESCT-TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecchhhhhccCCCCceEEEEeccee-eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 33345889999999999999 897431 1 112366679
Q ss_pred HhccCCcEEEEeecc
Q 043503 366 RLLRPGGIFWLDRFF 380 (430)
Q Consensus 366 RvLrPGG~lvl~~f~ 380 (430)
+.|+|||.+++.-..
T Consensus 213 ~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 213 EELISRGRMLLTFIC 227 (384)
T ss_dssp HHEEEEEEEEEEEEC
T ss_pred HHhccCCeEEEEEec
Confidence 999999999986543
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.00 E-value=7.4e-06 Score=78.74 Aligned_cols=69 Identities=14% Similarity=0.075 Sum_probs=54.4
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCCh-------hHHHHHHhc-------CCeeEEEcccccC-C-CCC--Cce
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDG-------PFNSFIASR-------GLISMHISVSQRL-P-FFE--NTL 339 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~-------~~le~a~~r-------g~i~~~~~d~~~l-p-f~d--~sf 339 (430)
.+|||+|||+|.++..++..+.+|+++ |+++ .+++.++++ +.+.++.+|+..+ + +++ ++|
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~g~~V~~v--D~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASLGLTVTAF--EQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHTTCCEEEE--ECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred CeEEEeeCccCHHHHHHHHhCCEEEEE--ECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 356999999999999999999999998 6667 777776543 3388999998764 3 444 789
Q ss_pred eEEEEccch
Q 043503 340 DIVHSMHVL 348 (430)
Q Consensus 340 DlV~~~~~L 348 (430)
|+|++...+
T Consensus 163 D~V~~dP~~ 171 (258)
T 2r6z_A 163 DIVYLDPMY 171 (258)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCC
Confidence 999996555
No 268
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.00 E-value=8.6e-06 Score=82.57 Aligned_cols=51 Identities=25% Similarity=0.336 Sum_probs=40.0
Q ss_pred ccccCCCCCCceeEEEEccchhhcCCc------------------------------------hhHHHHHHHHHHhccCC
Q 043503 328 VSQRLPFFENTLDIVHSMHVLSNWIPD------------------------------------SMLEFTLYDIYRLLRPG 371 (430)
Q Consensus 328 d~~~lpf~d~sfDlV~~~~~L~~~~~d------------------------------------~~l~~~L~ei~RvLrPG 371 (430)
.+..-.||+++||+|+++.++ ||+.+ .++..+|+..+|.|+||
T Consensus 140 SFy~rlfP~~S~d~v~Ss~aL-HWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pG 218 (374)
T 3b5i_A 140 SFYRRLFPARTIDFFHSAFSL-HWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRG 218 (374)
T ss_dssp CTTSCCSCTTCEEEEEEESCT-TBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred hhhcccCCCcceEEEEeccee-eeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 343345889999999999999 89752 13556799999999999
Q ss_pred cEEEEeec
Q 043503 372 GIFWLDRF 379 (430)
Q Consensus 372 G~lvl~~f 379 (430)
|.++++-.
T Consensus 219 G~mvl~~~ 226 (374)
T 3b5i_A 219 GAMFLVCL 226 (374)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEe
Confidence 99998643
No 269
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.00 E-value=1.1e-05 Score=86.77 Aligned_cols=97 Identities=12% Similarity=0.180 Sum_probs=65.8
Q ss_pred CCccEEEEEcCCccHH---HHHHHHc-C--CEEEEEecCCChhH---HHHHHhcCC---eeEEEcccccCCCCCCceeEE
Q 043503 275 GTIRIGLDIGGGTGTF---AARMRER-N--VTIITTSLNLDGPF---NSFIASRGL---ISMHISVSQRLPFFENTLDIV 342 (430)
Q Consensus 275 ~~ir~VLDIGcGtG~~---a~~La~~-g--~~Vv~vdiD~s~~~---le~a~~rg~---i~~~~~d~~~lpf~d~sfDlV 342 (430)
.+..+|||+|||+|.+ ++..+++ + ++|+++ +.++.. ++..+++|. |.++.++.+.+..| +++|+|
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAV--Eknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDII 432 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAV--EKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADII 432 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEE--ESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEE
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEE--ECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEE
Confidence 3445789999999987 5555554 3 367888 444321 233344444 99999999998766 579999
Q ss_pred EEccchhhcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 343 HSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 343 ~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
++ ..++.+...+.....+...+|.|||||.++
T Consensus 433 VS-EwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 433 VS-ELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EC-CCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EE-EcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99 333232222234468889999999999974
No 270
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.98 E-value=1.1e-05 Score=82.26 Aligned_cols=92 Identities=12% Similarity=0.022 Sum_probs=67.3
Q ss_pred cEEEEEcCCccHHHHHHHHc--C-CEEEEEecCCChhHHHHHHhc----CC----eeEEEcccccCC--CCCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER--N-VTIITTSLNLDGPFNSFIASR----GL----ISMHISVSQRLP--FFENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g-~~Vv~vdiD~s~~~le~a~~r----g~----i~~~~~d~~~lp--f~d~sfDlV~~ 344 (430)
.+|||++||+|.++..++.+ | .+|+++ |+++...+.++++ |. +.++.+|+..+- ...+.||+|++
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~av--Di~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYAN--DISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEE--CSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 45799999999999999985 5 478888 6667766655543 53 678888875432 12457999999
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.. . . ....++..+.+.|+|||+++++.
T Consensus 132 DP-~---g---~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP-F---G---TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC-S---S---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-C---c---CHHHHHHHHHHHhCCCCEEEEEe
Confidence 53 2 1 13468889999999999998864
No 271
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.97 E-value=2.4e-05 Score=85.42 Aligned_cols=98 Identities=15% Similarity=0.029 Sum_probs=67.0
Q ss_pred cEEEEEcCCccHHHHHHHHcC--------------------------------------------CEEEEEecCCChhHH
Q 043503 278 RIGLDIGGGTGTFAARMRERN--------------------------------------------VTIITTSLNLDGPFN 313 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g--------------------------------------------~~Vv~vdiD~s~~~l 313 (430)
..+||.+||+|++++.++..+ .+++|+ |+++.++
T Consensus 192 ~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~--Did~~av 269 (703)
T 3v97_A 192 TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGS--DSDARVI 269 (703)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE--ESCHHHH
T ss_pred CeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEE--ECCHHHH
Confidence 446999999999988877541 578888 5567777
Q ss_pred HHHHhc----CC---eeEEEcccccCC--CCCCceeEEEEccchhh-cCCchhHHHHHHH---HHHhccCCcEEEEe
Q 043503 314 SFIASR----GL---ISMHISVSQRLP--FFENTLDIVHSMHVLSN-WIPDSMLEFTLYD---IYRLLRPGGIFWLD 377 (430)
Q Consensus 314 e~a~~r----g~---i~~~~~d~~~lp--f~d~sfDlV~~~~~L~~-~~~d~~l~~~L~e---i~RvLrPGG~lvl~ 377 (430)
+.|+++ |+ +.+.++|+..+. ..+++||+|+++..... +..+..+..+... +.+.+.|||.+++.
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 776654 55 789999988774 33448999999855422 1222234444444 44555689998874
No 272
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.95 E-value=9.5e-06 Score=77.77 Aligned_cols=66 Identities=12% Similarity=0.093 Sum_probs=50.5
Q ss_pred cEEEEEcCCccHHHHHHHHcCCE--EEEEecCCChhHHHHHHhcC----CeeEEEcccccCCCCC-----CceeEEEEcc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVT--IITTSLNLDGPFNSFIASRG----LISMHISVSQRLPFFE-----NTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~--Vv~vdiD~s~~~le~a~~rg----~i~~~~~d~~~lpf~d-----~sfDlV~~~~ 346 (430)
.+|||||||+|.++. +. ++.+ |+++ |+++.|++.++++- .+.++.+|+..+++++ +..|.|+++.
T Consensus 23 ~~VLEIG~G~G~lt~-l~-~~~~~~v~av--Eid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 23 QAMVEIGPGLAALTE-PV-GERLDQLTVI--ELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp CCEEEECCTTTTTHH-HH-HTTCSCEEEE--CCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEEC
T ss_pred CEEEEECCCCcHHHH-hh-hCCCCeEEEE--ECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEECC
Confidence 346999999999999 65 4566 8888 77799999988762 4889999998887543 2346777754
Q ss_pred c
Q 043503 347 V 347 (430)
Q Consensus 347 ~ 347 (430)
.
T Consensus 99 P 99 (252)
T 1qyr_A 99 P 99 (252)
T ss_dssp C
T ss_pred C
Confidence 4
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.92 E-value=1e-05 Score=87.53 Aligned_cols=96 Identities=19% Similarity=0.236 Sum_probs=65.6
Q ss_pred ccEEEEEcCCccHHHH---HHHH-cC-----------CEEEEEecCCChhHH---HHHHhcC---CeeEEEcccccCCCC
Q 043503 277 IRIGLDIGGGTGTFAA---RMRE-RN-----------VTIITTSLNLDGPFN---SFIASRG---LISMHISVSQRLPFF 335 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~---~La~-~g-----------~~Vv~vdiD~s~~~l---e~a~~rg---~i~~~~~d~~~lpf~ 335 (430)
..+|||+|||+|.+.. ..++ .+ .+|++++- ++... +....+| .|.++.++.+.+..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEk--np~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEK--NPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEEC--CHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeC--ChHHHHHHHHHHhcCCCCeEEEEeCchhhcccc
Confidence 4578999999998853 2222 12 48888844 44322 2222333 499999999988764
Q ss_pred -----CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 336 -----ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 336 -----d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
.+.+|+|++ ..+..+...+.....|..+.|.|+|||.++
T Consensus 488 ~~~~~~ekVDIIVS-ElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 488 AKDRGFEQPDIIVS-ELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHTTCCCCSEEEE-CCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccCCCCcccEEEE-eccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 578999999 444344444446678888899999999874
No 274
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.91 E-value=9.9e-06 Score=79.74 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=53.9
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhc-----CCeeEEEcccccCC--CC---CCceeEEEEc
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASR-----GLISMHISVSQRLP--FF---ENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~r-----g~i~~~~~d~~~lp--f~---d~sfDlV~~~ 345 (430)
.+|||+|||+|.++..++++ +.+|+++ |.++.+++.|+++ ..+.++++|+..++ +. .++||.|++.
T Consensus 28 ~~vLD~g~G~G~~s~~la~~~~~~~Vigv--D~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 28 KIILDCTVGEGGHSRAILEHCPGCRIIGI--DVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTCEEEEE--ESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CEEEEEeCCcCHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEc
Confidence 45699999999999999988 5799998 6678899888765 35889999988775 12 1589999985
Q ss_pred c
Q 043503 346 H 346 (430)
Q Consensus 346 ~ 346 (430)
.
T Consensus 106 ~ 106 (301)
T 1m6y_A 106 L 106 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 275
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.85 E-value=6.7e-05 Score=75.60 Aligned_cols=98 Identities=21% Similarity=0.151 Sum_probs=62.2
Q ss_pred EEEEEcCCccHHHHHHHHc------------------CCEEEEEecCCChhHHHHHHhc--C-----CeeEEEc---ccc
Q 043503 279 IGLDIGGGTGTFAARMRER------------------NVTIITTSLNLDGPFNSFIASR--G-----LISMHIS---VSQ 330 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~------------------g~~Vv~vdiD~s~~~le~a~~r--g-----~i~~~~~---d~~ 330 (430)
+|+|+||++|..+..+... .++|...|+ ..+....+... + ..-|+.+ .+.
T Consensus 54 ~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDL--p~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 54 AIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDL--PGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp CCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEEC--TTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred EEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCC--CchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 3499999999766554433 245555543 22222222111 0 1123333 344
Q ss_pred cCCCCCCceeEEEEccchhhcCCc-------------------------------hhHHHHHHHHHHhccCCcEEEEeec
Q 043503 331 RLPFFENTLDIVHSMHVLSNWIPD-------------------------------SMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 331 ~lpf~d~sfDlV~~~~~L~~~~~d-------------------------------~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
.-.||++++|+|+++.++ ||..+ .++..+|.-..+.|+|||.+++.-.
T Consensus 132 ~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSL-MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESCT-TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhhh-hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 456899999999999999 89743 1344568889999999999998643
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.82 E-value=4.4e-05 Score=73.40 Aligned_cols=120 Identities=16% Similarity=0.160 Sum_probs=73.3
Q ss_pred ccEEEEEcCCccHHHHHHHHc--------------CCEEEEEecCC-ChhHHH-----------HHHh------------
Q 043503 277 IRIGLDIGGGTGTFAARMRER--------------NVTIITTSLNL-DGPFNS-----------FIAS------------ 318 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~--------------g~~Vv~vdiD~-s~~~le-----------~a~~------------ 318 (430)
..+|||+|+|+|..++.+++. ..++++++.++ +..++. .+++
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 346799999999877665432 14778886653 223222 2221
Q ss_pred ------cCC--eeEEEccccc-CCCCC----CceeEEEEccchhh-cCCchhHHHHHHHHHHhccCCcEEEEeeccccCc
Q 043503 319 ------RGL--ISMHISVSQR-LPFFE----NTLDIVHSMHVLSN-WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGS 384 (430)
Q Consensus 319 ------rg~--i~~~~~d~~~-lpf~d----~sfDlV~~~~~L~~-~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~ 384 (430)
.+. +.++.+|+.. ++.-+ ..||+|+.- .+.. -.|+--...++..+.|+|+|||.|+. |.. .
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD-~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa-a- 215 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLD-GFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS-A- 215 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEEC-SSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC-B-
T ss_pred hheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEEC-CCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC-C-
Confidence 122 5677888755 45322 279999983 2211 01110024689999999999999875 222 1
Q ss_pred CcHHHHHHHHHHcCCEEEEE
Q 043503 385 QLNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 385 ~~~~~~~~ll~~~Gfk~l~~ 404 (430)
..+...+..+||++.+.
T Consensus 216 ---~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 216 ---GFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp ---HHHHHHHHHHTEEEEEE
T ss_pred ---HHHHHHHHHCCCEEEeC
Confidence 34667788899997764
No 277
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.81 E-value=0.00013 Score=73.75 Aligned_cols=114 Identities=11% Similarity=0.085 Sum_probs=75.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
.+|||+||.+|.|+..++++|..|+++|+ .+|.......+.+.++.+|+..+..+.+.||+|+|-.+. + .
T Consensus 213 ~~vlDLGAaPGGWT~~l~~rg~~V~aVD~---~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~-~------p 282 (375)
T 4auk_A 213 MWAVDLGACPGGWTYQLVKRNMWVYSVDN---GPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVE-K------P 282 (375)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEECS---SCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSS-C------H
T ss_pred CEEEEeCcCCCHHHHHHHHCCCEEEEEEh---hhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCC-C------h
Confidence 34699999999999999999999999954 345555666677899999988877677889999994333 1 3
Q ss_pred HHHHHHHHHhccC---CcEEEEeeccccCc-----CcHHHHHHHHHHcCCEE
Q 043503 358 EFTLYDIYRLLRP---GGIFWLDRFFCFGS-----QLNETYVPMLDRIGFKK 401 (430)
Q Consensus 358 ~~~L~ei~RvLrP---GG~lvl~~f~~~~~-----~~~~~~~~ll~~~Gfk~ 401 (430)
...+.-+.+.|.. ++.++...+..... +....+.+.+...||..
T Consensus 283 ~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 283 AKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA 334 (375)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcch
Confidence 3444444444444 45444332211110 01234666788888863
No 278
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.78 E-value=3.7e-05 Score=81.46 Aligned_cols=99 Identities=13% Similarity=0.037 Sum_probs=68.3
Q ss_pred cEEEEEcCCccHHHHHHHHc--------------------CCEEEEEecCCChhHHHHHHhc----CC-------eeEEE
Q 043503 278 RIGLDIGGGTGTFAARMRER--------------------NVTIITTSLNLDGPFNSFIASR----GL-------ISMHI 326 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--------------------g~~Vv~vdiD~s~~~le~a~~r----g~-------i~~~~ 326 (430)
.+|||.|||+|.|...+++. ...++|+ |+++.+.+.|+.+ |. +.+.+
T Consensus 171 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~Gi--Eid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 171 EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGL--ELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEE--ESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEE--cCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 34699999999998887754 1368888 5557777666543 32 46788
Q ss_pred cccccCC-CCCCceeEEEEccchhhcCC-----------chhHHHHHHHHHHhccCCcEEEEee
Q 043503 327 SVSQRLP-FFENTLDIVHSMHVLSNWIP-----------DSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 327 ~d~~~lp-f~d~sfDlV~~~~~L~~~~~-----------d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+|.-..+ ....+||+|+++..+..... ...-..++..+.+.|+|||++.+..
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 8865433 34578999999866533111 1112368999999999999987653
No 279
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.74 E-value=2e-05 Score=80.74 Aligned_cols=66 Identities=11% Similarity=0.014 Sum_probs=53.2
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc------CC--eeEEEcccccC-CC-CCCceeEEEEc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR------GL--ISMHISVSQRL-PF-FENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r------g~--i~~~~~d~~~l-pf-~d~sfDlV~~~ 345 (430)
.+|||+|||+|..+..+++.+.+|+++ |.++.+++.|+++ |. +.++++|+..+ +. ++++||+|++.
T Consensus 95 ~~VLDLgcG~G~~al~LA~~g~~V~~V--D~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMSKASQGIYI--ERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp CEEEESSCSSSHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CEEEEeCCCchHHHHHHHhcCCEEEEE--ECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 457999999999999999999999999 6668888777654 54 88999998763 32 34689999994
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.73 E-value=0.00029 Score=65.41 Aligned_cols=92 Identities=10% Similarity=0.013 Sum_probs=63.3
Q ss_pred cEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHH----hcCC-----eeEEEccccc---------------C
Q 043503 278 RIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIA----SRGL-----ISMHISVSQR---------------L 332 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~----~rg~-----i~~~~~d~~~---------------l 332 (430)
++||++||| .-++.+++. +.+|+++ |.++...+.++ +.|. +.++.+++.. +
T Consensus 32 ~~VLEiGtG--ySTl~lA~~~~g~Vvtv--E~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 32 EVILEYGSG--GSTVVAAELPGKHVTSV--ESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp SEEEEESCS--HHHHHHHTSTTCEEEEE--ESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CEEEEECch--HHHHHHHHcCCCEEEEE--eCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 567999985 567777776 7899998 44566655554 3353 7888888543 2
Q ss_pred C--------C-CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 333 P--------F-FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 333 p--------f-~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
+ . ..++||+|+.-.-. ....+..+.+.|+|||.++++++..
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k--------~~~~~~~~l~~l~~GG~Iv~DNv~~ 157 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRF--------RVGCALATAFSITRPVTLLFDDYSQ 157 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSS--------HHHHHHHHHHHCSSCEEEEETTGGG
T ss_pred HHHhhhhhccccCCCCCEEEEeCCC--------chhHHHHHHHhcCCCeEEEEeCCcC
Confidence 2 1 23789999994321 2355666779999999999987543
No 281
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.69 E-value=7.3e-05 Score=72.61 Aligned_cols=140 Identities=15% Similarity=0.069 Sum_probs=74.8
Q ss_pred cEEEEEcCCccHHHHHHHHc-CC-EEEEEecCCChhHHHHHHh---cCC-eeEEEcccccCCCCCCceeEEEEccchh--
Q 043503 278 RIGLDIGGGTGTFAARMRER-NV-TIITTSLNLDGPFNSFIAS---RGL-ISMHISVSQRLPFFENTLDIVHSMHVLS-- 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~---rg~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~-- 349 (430)
.+|||+|||.|.|+.+++++ ++ .|+++|+... +...+.. .+. +.....+..-..++.+.+|+|+|.....
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d--~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApnsG 169 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQ--GHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGESSP 169 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT--TSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccC--ccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccCCC
Confidence 35799999999999998865 44 4667644321 1111110 011 2222322222335578999999954432
Q ss_pred -hcCCchhHHHHHHHHHHhccCC--cEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEecccccCCCchhHHHhHhh
Q 043503 350 -NWIPDSMLEFTLYDIYRLLRPG--GIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVGMKLDRGVKKNEWYFSAV 424 (430)
Q Consensus 350 -~~~~d~~l~~~L~ei~RvLrPG--G~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~~k~~~g~~~~~~~lsa~ 424 (430)
++++......+|.-+.++|+|| |.|++.-|-..+++..+ +...+++. |+.+....+ . .+. +..|+|+.+.
T Consensus 170 ~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~-l~~~lk~~-F~~V~~~KP-a-SR~-~S~E~Y~V~~ 242 (282)
T 3gcz_A 170 SIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIME-ELSRLQLK-HGGGLVRVP-L-SRN-STHEMYWVSG 242 (282)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHH-HHHHHHHH-HCCEEECCT-T-SCT-TCCCEEEETT
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHH-HHHHHHHh-cCCEEEEcC-C-Ccc-cCcceeEEEe
Confidence 0122211223567778999999 99999755533443333 33333332 555554433 2 222 2345555443
No 282
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.63 E-value=3.3e-05 Score=74.35 Aligned_cols=89 Identities=10% Similarity=-0.032 Sum_probs=57.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhH-------HHHHHhc----C----CeeEEEccccc-CCCCCCceeE
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPF-------NSFIASR----G----LISMHISVSQR-LPFFENTLDI 341 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~-------le~a~~r----g----~i~~~~~d~~~-lpf~d~sfDl 341 (430)
.+|||+|||+|..+..++.+|.+|+++ |.++.+ ++.+.++ + .+.++.+|... ++....+||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~v--E~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRML--ERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEE--ECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEE--ECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 456999999999999999999899998 555644 2222211 2 37899998765 3422347999
Q ss_pred EEEccchhhcCCchhHHHHHHHHHHhccCCc
Q 043503 342 VHSMHVLSNWIPDSMLEFTLYDIYRLLRPGG 372 (430)
Q Consensus 342 V~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG 372 (430)
|++...+.+ ... ...+.+..++||+.+
T Consensus 168 V~lDP~y~~-~~~---saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 168 VYLDPMFPH-KQK---SALVKKEMRVFQSLV 194 (258)
T ss_dssp EEECCCCCC-CCC--------HHHHHHHHHS
T ss_pred EEEcCCCCC-ccc---chHHHHHHHHHHHhh
Confidence 999766632 222 245666777777754
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.62 E-value=0.00026 Score=75.11 Aligned_cols=119 Identities=13% Similarity=0.045 Sum_probs=74.3
Q ss_pred EEEEEcCCccHHHHHHHHc-----------------CCEEEEEecCCChhHHHHHHhc----CC---eeEEEcccccCC-
Q 043503 279 IGLDIGGGTGTFAARMRER-----------------NVTIITTSLNLDGPFNSFIASR----GL---ISMHISVSQRLP- 333 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~-----------------g~~Vv~vdiD~s~~~le~a~~r----g~---i~~~~~d~~~lp- 333 (430)
+|||.+||+|.|...+++. ...++|+ |+++.+...|+.+ |. +.+.++|.-..+
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~--Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQ--ESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ 324 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEEC--CCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEE--eCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc
Confidence 6799999999998877542 3467777 6667777766643 43 223566654433
Q ss_pred CCCCceeEEEEccchhh--cCCc-----------------------h-hHHHHHHHHHHhccCCcEEEEee---ccccCc
Q 043503 334 FFENTLDIVHSMHVLSN--WIPD-----------------------S-MLEFTLYDIYRLLRPGGIFWLDR---FFCFGS 384 (430)
Q Consensus 334 f~d~sfDlV~~~~~L~~--~~~d-----------------------~-~l~~~L~ei~RvLrPGG~lvl~~---f~~~~~ 384 (430)
+.+..||+|+++..+.. |..+ . .--.++..+.+.|+|||++.+.. ++....
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~ 404 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNT 404 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCG
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCc
Confidence 45689999999765532 2110 0 11258899999999999976542 222221
Q ss_pred CcHHHHHHHHHHcCC
Q 043503 385 QLNETYVPMLDRIGF 399 (430)
Q Consensus 385 ~~~~~~~~ll~~~Gf 399 (430)
.....+.+.+-+.+.
T Consensus 405 ~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 405 NNEGEIRKTLVEQDL 419 (544)
T ss_dssp GGHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHhCCc
Confidence 233456665655554
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.61 E-value=0.00023 Score=69.82 Aligned_cols=99 Identities=23% Similarity=0.278 Sum_probs=70.5
Q ss_pred CccEEEEEcCCccHHHHHHHHc-C-CEEEEEecCCChhHHHHHHhc-----------CCeeEEEcccccC-CCCCCceeE
Q 043503 276 TIRIGLDIGGGTGTFAARMRER-N-VTIITTSLNLDGPFNSFIASR-----------GLISMHISVSQRL-PFFENTLDI 341 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~-g-~~Vv~vdiD~s~~~le~a~~r-----------g~i~~~~~d~~~l-pf~d~sfDl 341 (430)
..++||=||.|.|..+..+++. + .+|+.+ |+++.+++.+++. ..+.++.+|+..+ .-..++||+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~V--EID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMV--EIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEE--ESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEE--cCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 4567899999999999999987 3 477777 5557777776543 2388899987554 345678999
Q ss_pred EEEccchhhcCCch--hHHHHHHHHHHhccCCcEEEEe
Q 043503 342 VHSMHVLSNWIPDS--MLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 342 V~~~~~L~~~~~d~--~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
|+.- ......+.. ....++..+.++|+|||.++.-
T Consensus 161 Ii~D-~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 161 IISD-CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEES-CCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEEe-CCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 9983 221111110 1246899999999999999863
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.59 E-value=0.00073 Score=71.59 Aligned_cols=144 Identities=15% Similarity=0.053 Sum_probs=85.6
Q ss_pred eeecCCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc-----CCEEEEEecCCChhHHHHHHhc----CC---
Q 043503 254 WLIDNGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER-----NVTIITTSLNLDGPFNSFIASR----GL--- 321 (430)
Q Consensus 254 ~~~~~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~-----g~~Vv~vdiD~s~~~le~a~~r----g~--- 321 (430)
+..+.....+.++.+..........+|+|.+||+|.|...+++. ...++|+|+ ++.+...|+.+ |.
T Consensus 199 fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Ei--d~~~~~lA~~Nl~l~gi~~~ 276 (542)
T 3lkd_A 199 FYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQEL--NTSTYNLARMNMILHGVPIE 276 (542)
T ss_dssp CCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEES--CHHHHHHHHHHHHHTTCCGG
T ss_pred ecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEEC--cHHHHHHHHHHHHHcCCCcC
Confidence 34455555554433332111223346799999999998888766 568888854 56666666543 44
Q ss_pred -eeEEEcccccC--C-CCCCceeEEEEccchh-hcCCc------------------h-hHHHHHHHHHHhcc-CCcEEEE
Q 043503 322 -ISMHISVSQRL--P-FFENTLDIVHSMHVLS-NWIPD------------------S-MLEFTLYDIYRLLR-PGGIFWL 376 (430)
Q Consensus 322 -i~~~~~d~~~l--p-f~d~sfDlV~~~~~L~-~~~~d------------------~-~l~~~L~ei~RvLr-PGG~lvl 376 (430)
+.+..+|.-.. | .....||+|+++..+. .|..+ . .--.++..+.+.|+ |||++.+
T Consensus 277 ~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~ 356 (542)
T 3lkd_A 277 NQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAI 356 (542)
T ss_dssp GEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEE
T ss_pred ccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEE
Confidence 56788886554 4 4568899999975442 11100 0 01248999999999 9999865
Q ss_pred eecc--ccCcCcHHHHHHHHHHcCC
Q 043503 377 DRFF--CFGSQLNETYVPMLDRIGF 399 (430)
Q Consensus 377 ~~f~--~~~~~~~~~~~~ll~~~Gf 399 (430)
...- .........+.+.+-+.+.
T Consensus 357 VlP~g~Lf~~~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 357 VLPHGVLFRGNAEGTIRKALLEEGA 381 (542)
T ss_dssp EEETHHHHCCTHHHHHHHHHHHTTC
T ss_pred EecchHhhCCchhHHHHHHHHhCCc
Confidence 4211 1111223446665555554
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.48 E-value=0.00052 Score=75.54 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=64.2
Q ss_pred cEEEEEcCCccHHHHHHHHcC-----CEEEEEecCCChhHHHHH--Hh--------cCC--eeEEEcccccC-CCCCCce
Q 043503 278 RIGLDIGGGTGTFAARMRERN-----VTIITTSLNLDGPFNSFI--AS--------RGL--ISMHISVSQRL-PFFENTL 339 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g-----~~Vv~vdiD~s~~~le~a--~~--------rg~--i~~~~~d~~~l-pf~d~sf 339 (430)
.+|||.|||+|.++..++++. .+++|+ |+++.+.+.| +. +|. ..+...++... +.....|
T Consensus 323 ~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGv--EIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 323 EVISDPAAGSGNLLATVSAGFNNVMPRQIWAN--DIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp CEEEETTCTTSHHHHHHHHTSTTCCGGGEEEE--CSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CEEEECCCCccHHHHHHHHHhcccCCCeEEEE--ECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999998762 468888 5556666666 22 122 23444454442 2345789
Q ss_pred eEEEEccchhh-cCCc-------------------------hhHHHHHHHHHHhccCCcEEEEe
Q 043503 340 DIVHSMHVLSN-WIPD-------------------------SMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 340 DlV~~~~~L~~-~~~d-------------------------~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
|+|+++..+.. +..+ .....++..+.+.|+|||++.+.
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfI 464 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAI 464 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEE
Confidence 99999766522 1110 01334788899999999998764
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.31 E-value=0.00044 Score=61.08 Aligned_cols=82 Identities=12% Similarity=0.169 Sum_probs=56.5
Q ss_pred EEEEEcCCcc-HHHHHHHH-cCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCC--CceeEEEEccchhhcCCc
Q 043503 279 IGLDIGGGTG-TFAARMRE-RNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFE--NTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 279 ~VLDIGcGtG-~~a~~La~-~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d--~sfDlV~~~~~L~~~~~d 354 (430)
+|||||||.| ..|..|++ .|+.|+++|++..+ +.++..|..+ |..+ ..||+|.+.+.- .
T Consensus 38 rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~A-----------v~~v~dDiF~-P~~~~Y~~~DLIYsirPP-----~ 100 (153)
T 2k4m_A 38 RVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSH-----------GGIVRDDITS-PRMEIYRGAALIYSIRPP-----A 100 (153)
T ss_dssp EEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSS-----------TTEECCCSSS-CCHHHHTTEEEEEEESCC-----T
T ss_pred cEEEEccCCChHHHHHHHHhCCCeEEEEECCccc-----------cceEEccCCC-CcccccCCcCEEEEcCCC-----H
Confidence 4599999999 69999998 79999999776544 2277777755 3222 479999885332 2
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
.+...+.++.+.. |.-+++..+.
T Consensus 101 -El~~~i~~lA~~v--~adliI~pL~ 123 (153)
T 2k4m_A 101 -EIHSSLMRVADAV--GARLIIKPLT 123 (153)
T ss_dssp -TTHHHHHHHHHHH--TCEEEEECBT
T ss_pred -HHHHHHHHHHHHc--CCCEEEEcCC
Confidence 2555666666554 4667776544
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.28 E-value=0.0019 Score=62.90 Aligned_cols=118 Identities=14% Similarity=0.060 Sum_probs=77.8
Q ss_pred cEEEEEcCCccHHHHHHHHc-------CCEEEEEecCCC------------------------hhHHHHHHh----c---
Q 043503 278 RIGLDIGGGTGTFAARMRER-------NVTIITTSLNLD------------------------GPFNSFIAS----R--- 319 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-------g~~Vv~vdiD~s------------------------~~~le~a~~----r--- 319 (430)
..||++|+..|..+..|++. +.+|+++|..-. +...+.+++ .
T Consensus 108 g~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~ 187 (282)
T 2wk1_A 108 GDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLL 187 (282)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCC
T ss_pred CcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCC
Confidence 34599999999988777643 567888874310 001223332 2
Q ss_pred -CCeeEEEcccc-cCC-CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHH
Q 043503 320 -GLISMHISVSQ-RLP-FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDR 396 (430)
Q Consensus 320 -g~i~~~~~d~~-~lp-f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~ 396 (430)
..+.++.+++. .+| +++++||+|+.-.-.. +....+|..+...|+|||+++++++.. .+...+.+.+..++
T Consensus 188 ~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y-----~~~~~~Le~~~p~L~pGGiIv~DD~~~-~~G~~~Av~Ef~~~ 261 (282)
T 2wk1_A 188 DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY-----ESTWDTLTNLYPKVSVGGYVIVDDYMM-CPPCKDAVDEYRAK 261 (282)
T ss_dssp STTEEEEESCHHHHSTTCCCCCEEEEEECCCSH-----HHHHHHHHHHGGGEEEEEEEEESSCTT-CHHHHHHHHHHHHH
T ss_pred cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc-----ccHHHHHHHHHhhcCCCEEEEEcCCCC-CHHHHHHHHHHHHh
Confidence 34899999874 355 4467899999843221 124568999999999999999998732 12234567777778
Q ss_pred cCCEE
Q 043503 397 IGFKK 401 (430)
Q Consensus 397 ~Gfk~ 401 (430)
.|.+.
T Consensus 262 ~~i~~ 266 (282)
T 2wk1_A 262 FDIAD 266 (282)
T ss_dssp TTCCS
T ss_pred cCCce
Confidence 77653
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.21 E-value=0.0014 Score=64.17 Aligned_cols=126 Identities=14% Similarity=0.111 Sum_probs=67.9
Q ss_pred ccEEEEEcCCccHHHHHHHHc-CC-EEEEEecCCChhHHHHH-Hh--cCCeeEEEcccccCCCCCCceeEEEEccchh--
Q 043503 277 IRIGLDIGGGTGTFAARMRER-NV-TIITTSLNLDGPFNSFI-AS--RGLISMHISVSQRLPFFENTLDIVHSMHVLS-- 349 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~-g~-~Vv~vdiD~s~~~le~a-~~--rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~-- 349 (430)
.++|||+||++|.|+..++++ ++ .|+++|+.......... .. ..++.+. .+..-..+....+|+|+|...-.
T Consensus 82 g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~-~~~di~~l~~~~~DlVlsD~APnsG 160 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFK-DKSNVFTMPTEPSDTLLCDIGESSS 160 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEE-CSCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEee-cCceeeecCCCCcCEEeecCcCCCC
Confidence 456899999999999999986 44 56677553211000000 00 0112232 22222234567899999954331
Q ss_pred h-cCCchhHHHHHHHHHHhccCC-cEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 350 N-WIPDSMLEFTLYDIYRLLRPG-GIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 350 ~-~~~d~~l~~~L~ei~RvLrPG-G~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
+ ..+......+|.-+.++|+|| |.|++.-|-+.++.... +...+.+. |+.+...
T Consensus 161 ~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~-ll~~lk~~-F~~V~~~ 216 (300)
T 3eld_A 161 NPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIE-KLERLQLR-FGGGIVR 216 (300)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHH-HHHHHHHH-HCCEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHH-HHHHHHHh-CCcEEEE
Confidence 0 111111123466778999999 99999755544544333 33333332 4544433
No 290
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.11 E-value=0.00097 Score=65.19 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=70.2
Q ss_pred EEEEEcCCccHHHHHHHHc-CC-EEEEEecCCCh---hHHHHHHhcCCeeEEEc-ccccCCCCCCceeEEEEccchhhcC
Q 043503 279 IGLDIGGGTGTFAARMRER-NV-TIITTSLNLDG---PFNSFIASRGLISMHIS-VSQRLPFFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~-g~-~Vv~vdiD~s~---~~le~a~~rg~i~~~~~-d~~~lpf~d~sfDlV~~~~~L~~~~ 352 (430)
+|||+||++|.|+.+++.. |+ .|+++|+-... |++-.-....++.+..+ |+..++. ..+|+|+|--. .. .
T Consensus 97 ~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig-eS-s 172 (321)
T 3lkz_A 97 KVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG-ES-S 172 (321)
T ss_dssp EEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-CC-C
T ss_pred EEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc-cC-C
Confidence 6799999999999988877 65 48888654321 11100001123677776 7766663 66999999433 21 2
Q ss_pred Cc-----hhHHHHHHHHHHhccCC-cEEEEeeccccCcCcHHHHHHHHHHcCCEEE
Q 043503 353 PD-----SMLEFTLYDIYRLLRPG-GIFWLDRFFCFGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 353 ~d-----~~l~~~L~ei~RvLrPG-G~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l 402 (430)
+. .....+|.-+.+.|++| |-|++--|-...++..+.+..+=.+.|=..+
T Consensus 173 ~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~~fgg~lv 228 (321)
T 3lkz_A 173 SSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQRRYGGGLV 228 (321)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHHHHCCEEE
T ss_pred CChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHHHhCCEeE
Confidence 21 11223666667889999 8888854443334343444444344443333
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.08 E-value=0.003 Score=63.49 Aligned_cols=116 Identities=12% Similarity=0.031 Sum_probs=75.0
Q ss_pred CCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHcCC--EEEEEecCCChhHHHHHHhc----C--------Cee
Q 043503 258 NGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERNV--TIITTSLNLDGPFNSFIASR----G--------LIS 323 (430)
Q Consensus 258 ~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g~--~Vv~vdiD~s~~~le~a~~r----g--------~i~ 323 (430)
+.........++...++.. |||+.+|.|.=+..|++.+. .|++. |+++.-++..+++ | .+.
T Consensus 133 Qd~aS~l~~~~L~~~pg~~---VLD~CAaPGGKT~~la~~~~~~~l~A~--D~~~~R~~~l~~~l~r~~~~~~~~~~~v~ 207 (359)
T 4fzv_A 133 MDAASLLPVLALGLQPGDI---VLDLCAAPGGKTLALLQTGCCRNLAAN--DLSPSRIARLQKILHSYVPEEIRDGNQVR 207 (359)
T ss_dssp ECGGGHHHHHHHCCCTTEE---EEESSCTTCHHHHHHHHTTCEEEEEEE--CSCHHHHHHHHHHHHHHSCTTTTTSSSEE
T ss_pred hCHHHHHHHHHhCCCCCCE---EEEecCCccHHHHHHHHhcCCCcEEEE--cCCHHHHHHHHHHHHHhhhhhhccCCceE
Confidence 3334455666776666544 59999999999989988743 67777 6666544333321 2 266
Q ss_pred EEEcccccCC-CCCCceeEEEE----cc---chhh--------cCCc------hhHHHHHHHHHHhccCCcEEEEee
Q 043503 324 MHISVSQRLP-FFENTLDIVHS----MH---VLSN--------WIPD------SMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 324 ~~~~d~~~lp-f~d~sfDlV~~----~~---~L~~--------~~~d------~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+...|...++ ...+.||.|++ +. .... +.+. .....+|....+.|||||+++.++
T Consensus 208 v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 208 VTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 6777877665 44678999997 21 1100 1000 123468889999999999999876
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.98 E-value=0.0011 Score=63.63 Aligned_cols=101 Identities=15% Similarity=0.084 Sum_probs=57.3
Q ss_pred cEEEEEcCCccHHHHHHHHc-CC-EEEEEecCCChhHHHHHHh-cC--CeeEEEc-ccccCCCCCCceeEEEEccch--h
Q 043503 278 RIGLDIGGGTGTFAARMRER-NV-TIITTSLNLDGPFNSFIAS-RG--LISMHIS-VSQRLPFFENTLDIVHSMHVL--S 349 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~-rg--~i~~~~~-d~~~lpf~d~sfDlV~~~~~L--~ 349 (430)
.+|||+||+.|.|+.+++++ ++ .|.+.++..+-++...... .| .+.|..+ |+..++ ...+|+|+|-..- .
T Consensus 75 ~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSDMAPnSG 152 (269)
T 2px2_A 75 GKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLCDIGESSP 152 (269)
T ss_dssp EEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEECCCCCCS
T ss_pred CEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEeCCCCCCC
Confidence 35699999999999999997 33 3344433222000000000 12 2455556 877643 5689999994221 1
Q ss_pred hcCCc-hhHHHHHHHHHHhccCCc-EEEEeecc
Q 043503 350 NWIPD-SMLEFTLYDIYRLLRPGG-IFWLDRFF 380 (430)
Q Consensus 350 ~~~~d-~~l~~~L~ei~RvLrPGG-~lvl~~f~ 380 (430)
+..-| .....+|.-+.++|+||| .|++--|-
T Consensus 153 ~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 153 SAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 11111 111125655669999999 89886544
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.96 E-value=0.0022 Score=60.98 Aligned_cols=119 Identities=14% Similarity=0.077 Sum_probs=68.2
Q ss_pred EEEEEcCCccHHHHHHHHc-CC-EEEEEecCCCh---hHHHHHHhcCCeeEEEc-ccccCCCCCCceeEEEEccchhh--
Q 043503 279 IGLDIGGGTGTFAARMRER-NV-TIITTSLNLDG---PFNSFIASRGLISMHIS-VSQRLPFFENTLDIVHSMHVLSN-- 350 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~-g~-~Vv~vdiD~s~---~~le~a~~rg~i~~~~~-d~~~lpf~d~sfDlV~~~~~L~~-- 350 (430)
+|||+||++|.|+.+++.+ |+ .|+++|+-... ++.-.-.-...+.|..+ |...++ ...+|.|+|--.=..
T Consensus 81 ~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDIgeSs~~ 158 (267)
T 3p8z_A 81 RVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDIGESSPS 158 (267)
T ss_dssp EEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECCCCCCSC
T ss_pred EEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEEecCCCCCC
Confidence 5799999999999988887 55 58888653221 11111111144888888 876665 367999999422211
Q ss_pred -cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCE
Q 043503 351 -WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFK 400 (430)
Q Consensus 351 -~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk 400 (430)
+++......+|.-+.+.|++ |-|++--|-...++..+.+..+=.+.|=.
T Consensus 159 ~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~lq~~fgg~ 208 (267)
T 3p8z_A 159 PTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERLQRKHGGM 208 (267)
T ss_dssp HHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHHHHHHCCE
T ss_pred hhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHHHHHHhCCE
Confidence 11111122366666788998 78877544333333333333333344433
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.68 E-value=0.0038 Score=63.21 Aligned_cols=118 Identities=15% Similarity=0.101 Sum_probs=74.9
Q ss_pred ccEEEEEcCCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhc--------------CCeeEEEcccccCC----CCCC
Q 043503 277 IRIGLDIGGGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASR--------------GLISMHISVSQRLP----FFEN 337 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r--------------g~i~~~~~d~~~lp----f~d~ 337 (430)
.++||=||.|.|..+.++.+. ..+|+.+ |+++.+++.+++. ..+.++.+|+..+- -..+
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~V--EIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMV--EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEE--ESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEE--ccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 467899999999999999887 4466767 5568888888753 12567777764321 1346
Q ss_pred ceeEEEEccchhhcC---C-----chhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHc
Q 043503 338 TLDIVHSMHVLSNWI---P-----DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRI 397 (430)
Q Consensus 338 sfDlV~~~~~L~~~~---~-----d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~ 397 (430)
.||+|+.- +..... + ......++..+.++|+|||.++.-.-...-.+....+.+.+++.
T Consensus 284 ~yDvIIvD-l~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~v 350 (381)
T 3c6k_A 284 EFDYVIND-LTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL 350 (381)
T ss_dssp CEEEEEEE-CCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred ceeEEEEC-CCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHh
Confidence 89999983 211100 1 11135678899999999999876321111112234455666665
No 295
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.66 E-value=0.0046 Score=60.19 Aligned_cols=65 Identities=14% Similarity=0.026 Sum_probs=50.7
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc--CCeeEEEcccccCC-----CCCCceeEEEE
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR--GLISMHISVSQRLP-----FFENTLDIVHS 344 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r--g~i~~~~~d~~~lp-----f~d~sfDlV~~ 344 (430)
.++||.+||.|..+..+++++.+|+++ |.++.+++.+++- +.+.++++++..++ ...+++|.|++
T Consensus 24 g~~VD~T~G~GGHS~~il~~~g~Vigi--D~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 24 GVYVDATLGGAGHARGILERGGRVIGL--DQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILA 95 (285)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCEEEEE--ESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CEEEEeCCCCcHHHHHHHHCCCEEEEE--eCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCCCcCEEEe
Confidence 457999999999999999998899998 5557777776651 35888999887764 22357999997
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.06 E-value=0.0066 Score=58.89 Aligned_cols=40 Identities=20% Similarity=0.178 Sum_probs=34.2
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR 319 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r 319 (430)
.+|||++||+|+.+..+++.|.+++++ |+++.+.+.|++|
T Consensus 237 ~~vlD~f~GsGt~~~~a~~~g~~~~g~--e~~~~~~~~a~~r 276 (297)
T 2zig_A 237 DVVLDPFAGTGTTLIAAARWGRRALGV--ELVPRYAQLAKER 276 (297)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCEEEEE--ESCHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHcCCeEEEE--eCCHHHHHHHHHH
Confidence 457999999999999999999999998 5667888777765
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.81 E-value=0.051 Score=57.18 Aligned_cols=118 Identities=18% Similarity=0.158 Sum_probs=70.6
Q ss_pred eeecCCchhHHHHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---------------CCEEEEEecCCChhHHHHHHh
Q 043503 254 WLIDNGKLDYGIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---------------NVTIITTSLNLDGPFNSFIAS 318 (430)
Q Consensus 254 ~~~~~~~~~~~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---------------g~~Vv~vdiD~s~~~le~a~~ 318 (430)
+..+....++. -+++...++ .+|+|-+||+|.|...+.+. ...+.|. |+.+.+...|+.
T Consensus 199 fyTP~~Vv~lm-v~l~~p~~~---~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~--E~~~~~~~la~m 272 (530)
T 3ufb_A 199 FYTPRPVVRFM-VEVMDPQLG---ESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGG--EAKSLPYLLVQM 272 (530)
T ss_dssp CCCCHHHHHHH-HHHHCCCTT---CCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEE--CCSHHHHHHHHH
T ss_pred ECCcHHHHHHH-HHhhccCCC---CEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhh--hccHHHHHHHHH
Confidence 44555555553 344443333 34699999999998776543 2467888 555655555543
Q ss_pred c----CC--eeEEEcccccCCC----CCCceeEEEEccchhhcC------------C-chhHHHHHHHHHHhcc------
Q 043503 319 R----GL--ISMHISVSQRLPF----FENTLDIVHSMHVLSNWI------------P-DSMLEFTLYDIYRLLR------ 369 (430)
Q Consensus 319 r----g~--i~~~~~d~~~lpf----~d~sfDlV~~~~~L~~~~------------~-d~~l~~~L~ei~RvLr------ 369 (430)
+ |. ..+..+|.-..|. ....||+|+++..+.... + ...-..++..+.+.|+
T Consensus 273 Nl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l 352 (530)
T 3ufb_A 273 NLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGS 352 (530)
T ss_dssp HHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSS
T ss_pred HHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhcc
Confidence 3 43 4667777654442 245799999986663211 0 0112235677777776
Q ss_pred -CCcEEEEe
Q 043503 370 -PGGIFWLD 377 (430)
Q Consensus 370 -PGG~lvl~ 377 (430)
|||++.+.
T Consensus 353 ~~gGr~avV 361 (530)
T 3ufb_A 353 DNGGRAAVV 361 (530)
T ss_dssp SSCCEEEEE
T ss_pred CCCceEEEE
Confidence 79997654
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.81 E-value=0.026 Score=55.26 Aligned_cols=114 Identities=16% Similarity=0.056 Sum_probs=67.3
Q ss_pred cEEEEEcC------CccHHHHH-HHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccc---
Q 043503 278 RIGLDIGG------GTGTFAAR-MRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHV--- 347 (430)
Q Consensus 278 r~VLDIGc------GtG~~a~~-La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~--- 347 (430)
.+|||+|+ -.|++..+ +...|..|+++|+..-.. ....++++|+..+.. .+.||+|++-..
T Consensus 111 mrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s--------da~~~IqGD~~~~~~-~~k~DLVISDMAPNt 181 (344)
T 3r24_A 111 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS--------DADSTLIGDCATVHT-ANKWDLIISDMYDPR 181 (344)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC--------SSSEEEESCGGGEEE-SSCEEEEEECCCCTT
T ss_pred CEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc--------CCCeEEEcccccccc-CCCCCEEEecCCCCc
Confidence 45799996 56774332 222256888887643111 111458889765443 478999999321
Q ss_pred hhhcC-----CchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 348 LSNWI-----PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 348 L~~~~-----~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
-.+-. .....+.++.=+.++|+|||.|++--|-. +. .+.+.++. + .|+.++..
T Consensus 182 TG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG--sg-~~~L~~lr-k-~F~~VK~f 239 (344)
T 3r24_A 182 TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH--SW-NADLYKLM-G-HFSWWTAF 239 (344)
T ss_dssp SCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS--SC-CHHHHHHH-T-TEEEEEEE
T ss_pred CCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC--CC-HHHHHHHH-h-hCCeEEEE
Confidence 11100 11135556666778999999999975443 22 34455544 3 78877765
No 299
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.72 E-value=0.095 Score=51.48 Aligned_cols=76 Identities=16% Similarity=0.082 Sum_probs=49.5
Q ss_pred eeEEEcccc-cCC-CCCCceeEEEEccchhhcC-CchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcC
Q 043503 322 ISMHISVSQ-RLP-FFENTLDIVHSMHVLSNWI-PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIG 398 (430)
Q Consensus 322 i~~~~~d~~-~lp-f~d~sfDlV~~~~~L~~~~-~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~G 398 (430)
..+..+|+. .++ +.+..||+|+.- .+..-. |+-=-..++..+++.++|||.|.- |.+. ..+...+..+|
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flD-gFsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Ytaa-----g~VRR~L~~aG 239 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHD-AFSPYKNPELWTLDFLSLIKERIDEKGYWVS--YSSS-----LSVRKSLLTLG 239 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEEC-CSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SCCC-----HHHHHHHHHTT
T ss_pred EEEEechHHHHHhhhcccceeEEEeC-CCCcccCcccCCHHHHHHHHHHhCCCcEEEE--EeCc-----HHHHHHHHHCC
Confidence 456677763 344 345589999983 221111 110114699999999999998753 3332 45777899999
Q ss_pred CEEEEEE
Q 043503 399 FKKLRWN 405 (430)
Q Consensus 399 fk~l~~~ 405 (430)
|.+.+..
T Consensus 240 F~V~k~~ 246 (308)
T 3vyw_A 240 FKVGSSR 246 (308)
T ss_dssp CEEEEEE
T ss_pred CEEEecC
Confidence 9988755
No 300
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.56 E-value=0.25 Score=48.92 Aligned_cols=121 Identities=14% Similarity=0.201 Sum_probs=71.8
Q ss_pred EEEEEcCCccHHHHHHHHcC--CE-EEEEecCCChhHHHHHHhc-CCeeEEEcccccCCC---CCCceeEEEEccchhhc
Q 043503 279 IGLDIGGGTGTFAARMRERN--VT-IITTSLNLDGPFNSFIASR-GLISMHISVSQRLPF---FENTLDIVHSMHVLSNW 351 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g--~~-Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf---~d~sfDlV~~~~~L~~~ 351 (430)
+++|+-||.|.++..+.+.| ++ |.++ |+++...+..+.+ +...++.+|...+.. +...+|+|+....--.+
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~--E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQVVAAI--DVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEEEEEEE--CCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred eEEEeCcCccHHHHHHHHCCCCceEEEEE--eCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 46999999999999999888 43 5556 6667777766665 334567788777641 11258999986441111
Q ss_pred C--------CchhHHHHHH---HHHHhcc--CCcEEE--EeeccccCcCcHHHHHHHHHHcCCEEEEE
Q 043503 352 I--------PDSMLEFTLY---DIYRLLR--PGGIFW--LDRFFCFGSQLNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 352 ~--------~d~~l~~~L~---ei~RvLr--PGG~lv--l~~f~~~~~~~~~~~~~ll~~~Gfk~l~~ 404 (430)
. .+ ....++. ++.+.++ |.-.++ +..+. .....+.+...+++.||.+...
T Consensus 82 S~ag~~~g~~d-~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~--~~~~~~~i~~~l~~~GY~v~~~ 146 (343)
T 1g55_A 82 TRIGRQGDMTD-SRTNSFLHILDILPRLQKLPKYILLENVKGFE--VSSTRDLLIQTIENCGFQYQEF 146 (343)
T ss_dssp ---------------CHHHHHHHHGGGCSSCCSEEEEEEETTGG--GSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhcCCcCCccC-ccchHHHHHHHHHHHhcCCCCEEEEeCCcccc--CHHHHHHHHHHHHHCCCeeEEE
Confidence 1 11 1122444 4444555 653333 22221 2234567888899999987543
No 301
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.54 E-value=0.39 Score=47.48 Aligned_cols=101 Identities=9% Similarity=0.092 Sum_probs=65.7
Q ss_pred CccEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHH----Hhc-----------------------CCeeEEE
Q 043503 276 TIRIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFI----ASR-----------------------GLISMHI 326 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a----~~r-----------------------g~i~~~~ 326 (430)
..+.|+.+|||..+.+.++... +.+++ ++|. +.+++.- .+. ....++.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~--EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYV--DIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEE--EEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEE--ECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 3467899999999999999875 45555 4465 4443222 111 2356676
Q ss_pred cccccCC--------C-CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 327 SVSQRLP--------F-FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 327 ~d~~~lp--------f-~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
.|+.... . ..+...++++-.++ .+.+.+....++..+.+.. |||.+++.+.+.
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL-~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLL-CYMHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCG-GGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchh-hCCCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 7765532 1 22456777775666 6777777888898888877 788776555543
No 302
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.23 E-value=0.014 Score=71.79 Aligned_cols=95 Identities=15% Similarity=0.144 Sum_probs=40.6
Q ss_pred EEEEEcCCccHHHHHHHHc-C------CEEEEEecCCChhHHHHHHhcC--C-eeEEEcccccC-CCCCCceeEEEEccc
Q 043503 279 IGLDIGGGTGTFAARMRER-N------VTIITTSLNLDGPFNSFIASRG--L-ISMHISVSQRL-PFFENTLDIVHSMHV 347 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~-g------~~Vv~vdiD~s~~~le~a~~rg--~-i~~~~~d~~~l-pf~d~sfDlV~~~~~ 347 (430)
+||+||.|+|..+..+.+. + ...+.+ |+++.+.+.++++- . +..-..|.+.. ++...+||+|+++++
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~t--d~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTAT--DRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEE--CSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEe--cCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 5699999999766555433 1 133444 55555544444331 0 11111122221 344668999999999
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+ |-.++ +...|.++.++|||||++++..
T Consensus 1321 l-~~t~~--~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1321 L-ATLGD--PAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp -----------------------CCEEEEEE
T ss_pred c-ccccc--HHHHHHHHHHhcCCCcEEEEEe
Confidence 9 43444 7789999999999999988754
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.12 E-value=0.071 Score=51.52 Aligned_cols=83 Identities=20% Similarity=0.312 Sum_probs=53.1
Q ss_pred CeeEEEccccc-CC-CCCCceeEEEEccchhhcCC--------------c---hhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 321 LISMHISVSQR-LP-FFENTLDIVHSMHVLSNWIP--------------D---SMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 321 ~i~~~~~d~~~-lp-f~d~sfDlV~~~~~L~~~~~--------------d---~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
.+.++++|+.. ++ +++++||+|+++........ + ..+..++.++.|+|+|||.+++..-..
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 36788898755 33 56789999999755421100 0 013457889999999999998753110
Q ss_pred c------Cc----CcHHHHHHHHHHcCCEEEE
Q 043503 382 F------GS----QLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 382 ~------~~----~~~~~~~~ll~~~Gfk~l~ 403 (430)
. +. .....+..++++.||....
T Consensus 101 ~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 101 AVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred ccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 0 00 0124577788999998665
No 304
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.41 E-value=0.39 Score=47.41 Aligned_cols=92 Identities=13% Similarity=-0.035 Sum_probs=61.7
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcccccC----C-CCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVSQRL----P-FFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l----p-f~d~sfDlV~~~~~L~ 349 (430)
.+||-+|+|. |.+++.+++. |+ +|+++ +.++...+.+++.|.-.++......+ . ..++.+|+|+..-..
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~- 268 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCGASIIIAV--DIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS- 268 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCSEEEEE--ESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEE--CCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCC-
Confidence 4569999886 7888888876 87 68887 55677778888777633333221111 0 112379999874221
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
...+.+..+.|+|||.+++....
T Consensus 269 --------~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 269 --------PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp --------HHHHHHHHHTEEEEEEEEECCCC
T ss_pred --------HHHHHHHHHHHhcCCEEEEeCCC
Confidence 24578889999999999886543
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=93.33 E-value=0.4 Score=48.16 Aligned_cols=119 Identities=13% Similarity=0.025 Sum_probs=72.0
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEE-EEecCCChhHHHHHHhc-CCeeEEEcccccCCC--------CCCceeEEEEccch
Q 043503 279 IGLDIGGGTGTFAARMRERNVTII-TTSLNLDGPFNSFIASR-GLISMHISVSQRLPF--------FENTLDIVHSMHVL 348 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv-~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf--------~d~sfDlV~~~~~L 348 (430)
+++|+-||.|.++..+.+.|.+++ ++ |+++...+..+.+ ....++.+|...+.. ....+|+|+....-
T Consensus 4 ~vidLFsG~GGlslG~~~aG~~~v~av--E~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPC 81 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAGFDVKMAV--EIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPC 81 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHTCEEEEEE--CSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCC
T ss_pred eEEEEccCcCHHHHHHHHCCCcEEEEE--eCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCC
Confidence 469999999999999999998766 55 6667666665555 335677788776641 24679999985331
Q ss_pred hhcC------CchhHHHHH---HHHHHhccCCcEEEEee---ccc-cCcCcHHHHHHHHHHcCCEE
Q 043503 349 SNWI------PDSMLEFTL---YDIYRLLRPGGIFWLDR---FFC-FGSQLNETYVPMLDRIGFKK 401 (430)
Q Consensus 349 ~~~~------~d~~l~~~L---~ei~RvLrPGG~lvl~~---f~~-~~~~~~~~~~~ll~~~Gfk~ 401 (430)
-.+. .++....++ .++.+.++|.- |++.. +.. ......+.+. .+++.||.+
T Consensus 82 Q~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~-~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 82 QGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLF-FLAENVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CTTC-------CHHHHHHHHHHHHHHHHHCCSE-EEEEECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred CCcccccCCCCCCchHHHHHHHHHHHHHhCCCE-EEEecchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 1111 111122333 34555567853 33322 111 1122345666 889999998
No 306
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.06 E-value=0.12 Score=48.86 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=33.1
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR 319 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r 319 (430)
.+|||..||+|+.+....+.|.+++++ |+++...+.+++|
T Consensus 214 ~~vlD~f~GsGtt~~~a~~~gr~~ig~--e~~~~~~~~~~~r 253 (260)
T 1g60_A 214 DLVLDCFMGSGTTAIVAKKLGRNFIGC--DMNAEYVNQANFV 253 (260)
T ss_dssp CEEEESSCTTCHHHHHHHHTTCEEEEE--ESCHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHcCCeEEEE--eCCHHHHHHHHHH
Confidence 457999999999999999999999999 5556677766654
No 307
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=92.82 E-value=0.52 Score=45.65 Aligned_cols=123 Identities=11% Similarity=0.072 Sum_probs=79.8
Q ss_pred EEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CCeeEEEccccc-CC---CCCCceeEEEEccchhhcC
Q 043503 281 LDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR----GLISMHISVSQR-LP---FFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 281 LDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~-lp---f~d~sfDlV~~~~~L~~~~ 352 (430)
||+=+|+|.+++.+.+++.+++.+ |.++...+..+++ ..+.++..|... +. -+...||+|+.-.....
T Consensus 96 LDlfaGSGaLgiEaLS~~d~~vfv--E~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~-- 171 (283)
T 2oo3_A 96 LSYYPGSPYFAINQLRSQDRLYLC--ELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYER-- 171 (283)
T ss_dssp CCEEECHHHHHHHHSCTTSEEEEE--CCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCS--
T ss_pred eeEeCCcHHHHHHHcCCCCeEEEE--eCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCC--
Confidence 999999999999999988788888 6666666666554 347788887432 22 23457999999655531
Q ss_pred CchhHHHHHHHHHH--hccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEeccc
Q 043503 353 PDSMLEFTLYDIYR--LLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVGMK 409 (430)
Q Consensus 353 ~d~~l~~~L~ei~R--vLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~~k 409 (430)
. +....++..+.+ .+.|+|.+++=..+. .....+.+.+-+++.|.+.+......+
T Consensus 172 k-~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~-~~~~~~~~~~~l~~~~~~~l~~el~~~ 228 (283)
T 2oo3_A 172 K-EEYKEIPYAIKNAYSKFSTGLYCVWYPVV-NKAWTEQFLRKMREISSKSVRIELHLN 228 (283)
T ss_dssp T-THHHHHHHHHHHHHHHCTTSEEEEEEEES-SHHHHHHHHHHHHHHCSSEEEEEEECC
T ss_pred C-cHHHHHHHHHHHhCccCCCeEEEEEEecc-chHHHHHHHHHHHhcCCCeEEEEEEec
Confidence 1 135666666665 456899887743332 222334555666666766666554443
No 308
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.55 E-value=1 Score=44.33 Aligned_cols=124 Identities=9% Similarity=0.081 Sum_probs=73.6
Q ss_pred EEEEEcCCccHHHHHHHHcCC--EEE--EEecCCChhHHHHHHhcCCeeEEEcccccCC---CCCCceeEEEEccchhhc
Q 043503 279 IGLDIGGGTGTFAARMRERNV--TII--TTSLNLDGPFNSFIASRGLISMHISVSQRLP---FFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~--~Vv--~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp---f~d~sfDlV~~~~~L~~~ 351 (430)
+++|+-||.|.+...+.+.|. +++ ++ |+++...+.-+.+-.-.++.+|...+. ++...+|+++.+..--.+
T Consensus 12 ~vidLFaG~GG~~~G~~~aG~~~~~v~~a~--e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 12 NVIEFFSGIGGLRSSYERSSININATFIPF--DINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp EEEEETCTTTHHHHHHHHSSCCCCEEEEEE--CCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred EEEEECCChhHHHHHHHHcCCCceEEEEEE--ECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 569999999999999998884 554 66 555655555554421125567776664 222368999975331111
Q ss_pred ----------CCchhHHHHHHHHHH-hc-----cCCcEEEEeeccc-cCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 352 ----------IPDSMLEFTLYDIYR-LL-----RPGGIFWLDRFFC-FGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 352 ----------~~d~~l~~~L~ei~R-vL-----rPGG~lvl~~f~~-~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
..+ ....++.++.| ++ +|. +|++..... ......+.+.+.+++.||.+....+
T Consensus 90 s~S~ag~~~~~~d-~r~~L~~~~~r~~i~~~~~~P~-~~~lENV~gl~~~~~~~~i~~~l~~~GY~v~~~vl 159 (327)
T 3qv2_A 90 NNSIMSKHKDIND-PRAKSVLHLYRDILPYLINKPK-HIFIENVPLFKESLVFKEIYNILIKNQYYIKDIIC 159 (327)
T ss_dssp SHHHHTTTCTTTC-GGGHHHHHHHHTTGGGCSSCCS-EEEEEECGGGGGSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccCCCCCCCcc-ccchhHHHHHHHHHHHhccCCC-EEEEEchhhhcChHHHHHHHHHHHhCCCEEEEEEE
Confidence 122 23356777777 54 454 344432211 1123456788889999998765443
No 309
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.42 E-value=0.38 Score=42.77 Aligned_cols=91 Identities=19% Similarity=0.076 Sum_probs=56.2
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEccccc----CC--CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQR----LP--FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~----lp--f~d~sfDlV~~~~~L 348 (430)
++||.+|+ |.|..+..++.. |.+|+++ +.++...+.+++.|....+...... +. ...+.+|+|+.+-.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~--~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTT--AGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEE--ESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEE--eCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 45799994 556666666654 9999888 4456666666665642222111111 00 12346999997421
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
. ..+....++|+|||.+++....
T Consensus 117 ----~-----~~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 117 ----G-----EAIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp ----T-----HHHHHHHHTEEEEEEEEECSCG
T ss_pred ----h-----HHHHHHHHHhccCCEEEEEcCC
Confidence 1 2577888999999999886543
No 310
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.24 E-value=0.51 Score=46.19 Aligned_cols=91 Identities=12% Similarity=0.049 Sum_probs=60.3
Q ss_pred EEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccchh
Q 043503 279 IGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVLS 349 (430)
Q Consensus 279 ~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L~ 349 (430)
+||=+|+|. |.++..+++. |+ +|+++ +.++..++.+++-|.-.++......+. .....+|+|+..-.-
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~- 245 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLGAGRIFAV--GSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD- 245 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCSSEEEE--CCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC-
T ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEE--CCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC-
Confidence 347788875 7788888876 87 78887 666777788888776444332211111 123469999974211
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
+ ..+....+.|+|||.+++....
T Consensus 246 ---~-----~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 246 ---V-----HTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp ---T-----THHHHHHHHEEEEEEEEECCCC
T ss_pred ---h-----HHHHHHHHHHhcCCEEEEeccc
Confidence 1 2577888999999999875543
No 311
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=92.04 E-value=0.22 Score=49.57 Aligned_cols=77 Identities=12% Similarity=0.024 Sum_probs=52.9
Q ss_pred HHHHHccCCCCCccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHHHHhc---CCeeEEEcccccCC--CC-
Q 043503 265 IDQVLSMKPLGTIRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSFIASR---GLISMHISVSQRLP--FF- 335 (430)
Q Consensus 265 id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~a~~r---g~i~~~~~d~~~lp--f~- 335 (430)
+++++..+......+++|..||.|..+..++++ +.+|+++ |.++.+++.++ + ..+.++.+++..+. ..
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~--D~Dp~Al~~A~-rL~~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAI--DRDPQAIAVAK-TIDDPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEE--ESCHHHHHHHT-TCCCTTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHH-hhcCCcEEEEeCCHHHHHHHHHh
Confidence 344444333333345799999999999999987 4689988 55577777773 3 34788888877654 11
Q ss_pred ---CCceeEEEE
Q 043503 336 ---ENTLDIVHS 344 (430)
Q Consensus 336 ---d~sfDlV~~ 344 (430)
.+++|.|+.
T Consensus 123 ~g~~~~vDgILf 134 (347)
T 3tka_A 123 RDLIGKIDGILL 134 (347)
T ss_dssp TTCTTCEEEEEE
T ss_pred cCCCCcccEEEE
Confidence 136999988
No 312
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.01 E-value=0.5 Score=46.15 Aligned_cols=88 Identities=17% Similarity=0.093 Sum_probs=60.3
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
.+||-+|+|. |.++..+++. |++|+++ +.++.-.+.+++.|.-.++ .+.+.+. ..+|+|+..-.- +
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~v~-~~~~~~~---~~~D~vid~~g~----~-- 245 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVF--ARNEHKKQDALSMGVKHFY-TDPKQCK---EELDFIISTIPT----H-- 245 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE--CSSSTTHHHHHHTTCSEEE-SSGGGCC---SCEEEEEECCCS----C--
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEE--eCCHHHHHHHHhcCCCeec-CCHHHHh---cCCCEEEECCCc----H--
Confidence 4458889875 7788888776 9999988 5556667888887764444 3333222 279999974222 1
Q ss_pred hHHHHHHHHHHhccCCcEEEEeecc
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+....++|+|||.+++....
T Consensus 246 ---~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 246 ---YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp ---CCHHHHHTTEEEEEEEEECCCC
T ss_pred ---HHHHHHHHHHhcCCEEEEECCC
Confidence 1366788999999999886543
No 313
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=91.57 E-value=1.6 Score=42.88 Aligned_cols=121 Identities=12% Similarity=0.117 Sum_probs=70.2
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-CCeeEEEcccccCCCC-CCceeEEEEccchhhcC----
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR-GLISMHISVSQRLPFF-ENTLDIVHSMHVLSNWI---- 352 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf~-d~sfDlV~~~~~L~~~~---- 352 (430)
+++|+.||.|.++..+.+.|.+++.. +|+++...+..+.+ +... .+|...+... -..+|+|+....--.+.
T Consensus 13 ~~~dLFaG~Gg~~~g~~~aG~~~v~~-~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ag~ 89 (327)
T 2c7p_A 13 RFIDLFAGLGGFRLALESCGAECVYS-NEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSISGK 89 (327)
T ss_dssp EEEEETCTTTHHHHHHHHTTCEEEEE-ECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCTTSC
T ss_pred cEEEECCCcCHHHHHHHHCCCeEEEE-EeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcchhcc
Confidence 56999999999999999999876543 36666666555544 2211 5666655411 12489999853221111
Q ss_pred ------CchhHHHHHHHHHHhccCCcEEEEee---cccc-CcCcHHHHHHHHHHcCCEEEE
Q 043503 353 ------PDSMLEFTLYDIYRLLRPGGIFWLDR---FFCF-GSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 353 ------~d~~l~~~L~ei~RvLrPGG~lvl~~---f~~~-~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
+...+-.-+.++.+.++|. +|++.. +... .....+.+...+++.||.+.-
T Consensus 90 ~~g~~d~r~~L~~~~~r~i~~~~P~-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 90 QKGFEDSRGTLFFDIARIVREKKPK-VVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp CCGGGSTTSCHHHHHHHHHHHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEE
T ss_pred cCCCcchhhHHHHHHHHHHHhccCc-EEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEE
Confidence 1112333344455567886 333322 1111 122456788889999997543
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.51 E-value=0.58 Score=45.91 Aligned_cols=91 Identities=15% Similarity=0.094 Sum_probs=59.5
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcc---ccc----CC-CCCCceeEEEEcc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISV---SQR----LP-FFENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d---~~~----lp-f~d~sfDlV~~~~ 346 (430)
.+||-+|+|. |.++..+++. |+ +|+++ +.++.-.+.+++.|.-.++... ... +. ...+.+|+|+..-
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMGAAQVVVT--DLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 3458899875 7888888775 88 88888 5567777888877763333221 011 10 0115699998742
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
.. ...+....++|+|||.+++...
T Consensus 251 g~---------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GA---------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CC---------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CC---------hHHHHHHHHHhcCCCEEEEEec
Confidence 21 2356788899999999987654
No 315
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.50 E-value=1.1 Score=48.10 Aligned_cols=77 Identities=21% Similarity=0.209 Sum_probs=48.2
Q ss_pred eeEEEccccc-CC-CC---CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHH
Q 043503 322 ISMHISVSQR-LP-FF---ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDR 396 (430)
Q Consensus 322 i~~~~~d~~~-lp-f~---d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~ 396 (430)
+.++.+|+.. ++ +. +..+|+++.-..--.-.++-=...++..+.++++|||.+.-. .+ ...+...+.+
T Consensus 150 l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~--~~-----~~~vr~~l~~ 222 (689)
T 3pvc_A 150 LDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF--TA-----AGFVRRGLQQ 222 (689)
T ss_dssp EEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES--CC-----CHHHHHHHHH
T ss_pred EEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec--cC-----cHHHHHHHHh
Confidence 4566677632 33 21 478999988322111112111256899999999999986542 22 2457788999
Q ss_pred cCCEEEEEE
Q 043503 397 IGFKKLRWN 405 (430)
Q Consensus 397 ~Gfk~l~~~ 405 (430)
+||.+.+..
T Consensus 223 aGf~~~~~~ 231 (689)
T 3pvc_A 223 AGFNVTKVK 231 (689)
T ss_dssp TTCEEEEEE
T ss_pred CCeEEEecc
Confidence 999988755
No 316
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.45 E-value=0.29 Score=47.88 Aligned_cols=82 Identities=22% Similarity=0.158 Sum_probs=52.6
Q ss_pred eeEEEccccc-CC-CCCCceeEEEEccchhhcCC-----------chhHHHHHHHHHHhccCCcEEEEeeccc--cCc--
Q 043503 322 ISMHISVSQR-LP-FFENTLDIVHSMHVLSNWIP-----------DSMLEFTLYDIYRLLRPGGIFWLDRFFC--FGS-- 384 (430)
Q Consensus 322 i~~~~~d~~~-lp-f~d~sfDlV~~~~~L~~~~~-----------d~~l~~~L~ei~RvLrPGG~lvl~~f~~--~~~-- 384 (430)
..++.+|+.. +. +++++||+|++......-.. ...+...+.++.|+|+|||.+++..--. .+.
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 5677888643 44 56889999999754421100 0136778999999999999998853111 110
Q ss_pred ---CcHHHHHHHHHHcCCEEEE
Q 043503 385 ---QLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 385 ---~~~~~~~~ll~~~Gfk~l~ 403 (430)
...+.+..+++..||....
T Consensus 95 ~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp ECCHHHHHHHHHHHTTCCEEEE
T ss_pred cccchHHHHHHHHHhCCCEEEE
Confidence 0124455677899998654
No 317
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=91.27 E-value=2.8 Score=40.38 Aligned_cols=124 Identities=12% Similarity=0.140 Sum_probs=73.2
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEE-EEecCCChhHHHHHHhcCCeeEEEcccccCCCC-CCceeEEEEccchhhc-----
Q 043503 279 IGLDIGGGTGTFAARMRERNVTII-TTSLNLDGPFNSFIASRGLISMHISVSQRLPFF-ENTLDIVHSMHVLSNW----- 351 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv-~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~-d~sfDlV~~~~~L~~~----- 351 (430)
+|||+=||.|.+...+.+.|.+++ ++|+| +...+.-+.+-.-.++.+|...+... -..+|+++....--.+
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d--~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYD--KSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECC--TTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCC--HHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCC
Confidence 369999999999999988898776 55444 44444444443346677887776521 1358999874321111
Q ss_pred ---CCc--hhHHHHHHHHHHhccCCcEEEEee---ccc-cCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 352 ---IPD--SMLEFTLYDIYRLLRPGGIFWLDR---FFC-FGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 352 ---~~d--~~l~~~L~ei~RvLrPGG~lvl~~---f~~-~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
..+ ..+-..+.++.+.+||. +|++.. +.. ......+.+...+++.||.+.-..
T Consensus 80 ~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~v 141 (331)
T 3ubt_Y 80 LRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIIL 141 (331)
T ss_dssp ECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEEEE
T ss_pred ccCCCCchhHHHHHHHHHHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcEEEEEe
Confidence 112 12333334455567886 334322 111 122345678888999999865433
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.25 E-value=0.91 Score=44.87 Aligned_cols=91 Identities=15% Similarity=0.198 Sum_probs=61.1
Q ss_pred EEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcccccC--------CCCCCceeEEEEccc
Q 043503 279 IGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVSQRL--------PFFENTLDIVHSMHV 347 (430)
Q Consensus 279 ~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l--------pf~d~sfDlV~~~~~ 347 (430)
+||=+|+|. |.+++.+++. |+ +|+++ +.++.-.+.+++-|.-.++......+ ....+.+|+|+..-.
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLAGATTVILS--TRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG 262 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC
Confidence 457788765 7788888776 88 88887 66777788888877644432211111 022347999998421
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
. ...+....++|++||.+++....
T Consensus 263 ~---------~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 263 V---------AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp C---------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred C---------HHHHHHHHHHhccCCEEEEEecc
Confidence 1 24678889999999999886544
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.00 E-value=0.38 Score=48.01 Aligned_cols=100 Identities=12% Similarity=0.090 Sum_probs=62.7
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcccccC-C------CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVSQRL-P------FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l-p------f~d~sfDlV~~~~~ 347 (430)
.+||-+|+|. |.++..+++. |+ +|+++ +.++..++.+++.|. .++......+ . .....+|+|+..-.
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa-~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g 263 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLLGAACVIVG--DQNPERLKLLSDAGF-ETIDLRNSAPLRDQIDQILGKPEVDCGVDAVG 263 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEE--ESCHHHHHHHHTTTC-EEEETTSSSCHHHHHHHHHSSSCEEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEE--cCCHHHHHHHHHcCC-cEEcCCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence 4569999876 8888888876 88 89988 556777788887776 4332221111 0 11236999997533
Q ss_pred hhhcC--C---chhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 348 LSNWI--P---DSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 348 L~~~~--~---d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
-.... + .......+.++.++|+|||.+++....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 264 FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred CccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 21000 0 000123678889999999999875543
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.88 E-value=0.81 Score=44.41 Aligned_cols=91 Identities=13% Similarity=0.062 Sum_probs=60.6
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~~ 351 (430)
.+||-+|+|. |.++..+++. |++|+++ +.++...+.+++.|.-.++......+. -..+.+|+|+..-.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g---- 241 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGLRVAAV--DIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAV---- 241 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEE--ESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSC----
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEE--eCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCC----
Confidence 4457789875 8888888876 9999988 556777888888776333322111110 01136898887321
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
....+....++|+|||.+++...
T Consensus 242 -----~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 242 -----SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEECSC
T ss_pred -----CHHHHHHHHHHhccCCEEEEeCC
Confidence 12467888999999999987543
No 321
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.85 E-value=2.2 Score=35.82 Aligned_cols=108 Identities=11% Similarity=0.110 Sum_probs=64.8
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhhcC
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~~~ 352 (430)
+++=+|+|. | .++..|.+.|..|+++| .++...+.+++.|. .++.+|..... ..-..+|+|++. .
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid--~~~~~~~~~~~~g~-~~i~gd~~~~~~l~~a~i~~ad~vi~~------~ 79 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIE--TSRTRVDELRERGV-RAVLGNAANEEIMQLAHLECAKWLILT------I 79 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEE--SCHHHHHHHHHTTC-EEEESCTTSHHHHHHTTGGGCSEEEEC------C
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEE--CCHHHHHHHHHcCC-CEEECCCCCHHHHHhcCcccCCEEEEE------C
Confidence 357777765 3 23444445599999984 45666666666665 56777754422 122468988873 2
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEE
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l 402 (430)
++......+....|.+.|+..++.-- ......+.+.+.|-..+
T Consensus 80 ~~~~~n~~~~~~a~~~~~~~~iiar~-------~~~~~~~~l~~~G~d~v 122 (140)
T 3fwz_A 80 PNGYEAGEIVASARAKNPDIEIIARA-------HYDDEVAYITERGANQV 122 (140)
T ss_dssp SCHHHHHHHHHHHHHHCSSSEEEEEE-------SSHHHHHHHHHTTCSEE
T ss_pred CChHHHHHHHHHHHHHCCCCeEEEEE-------CCHHHHHHHHHCCCCEE
Confidence 22223334556777888888766531 12445677888887644
No 322
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.16 E-value=1.3 Score=43.20 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=58.7
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEccc-ccCC------CC---CCceeEEEEc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVS-QRLP------FF---ENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~-~~lp------f~---d~sfDlV~~~ 345 (430)
.+||-+|+|. |.++..+++. |++|+++ +.++...+.+++-|.-.++.... ..+. .. .+.+|+|+..
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYGAFVVCT--ARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--ESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEE--cCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 3458889864 7777777775 8888877 55677778887777633332211 1110 11 2469999874
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
-.. ...+....++|+|||.+++...
T Consensus 248 ~g~---------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 248 SGN---------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCC---------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCC---------HHHHHHHHHHHhcCCEEEEEec
Confidence 221 2357788899999999987653
No 323
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=90.01 E-value=1.1 Score=42.78 Aligned_cols=124 Identities=10% Similarity=-0.028 Sum_probs=79.3
Q ss_pred EEEEEcCCccHHHHHHHHc---------CCEEEEEe-----cCCCh--------------------hHHHHHH---hc--
Q 043503 279 IGLDIGGGTGTFAARMRER---------NVTIITTS-----LNLDG--------------------PFNSFIA---SR-- 319 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~---------g~~Vv~vd-----iD~s~--------------------~~le~a~---~r-- 319 (430)
.++++|+-.|..+..++.. .-+|+++| ++.++ ..++.+. ++
T Consensus 72 ~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~ 151 (257)
T 3tos_A 72 VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSD 151 (257)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTS
T ss_pred eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhhh
Confidence 4599999999877765541 36888887 33221 0112111 11
Q ss_pred ------CCeeEEEccccc-CC-----CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccC-cCc
Q 043503 320 ------GLISMHISVSQR-LP-----FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFG-SQL 386 (430)
Q Consensus 320 ------g~i~~~~~d~~~-lp-----f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~-~~~ 386 (430)
..+.++.+++.. +| .+..+||+|+.-.-. +. .....+..+...|+|||+++++++.... +..
T Consensus 152 ~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~---~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~ 226 (257)
T 3tos_A 152 FFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YE---PTKAVLEAIRPYLTKGSIVAFDELDNPKWPGE 226 (257)
T ss_dssp TTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HH---HHHHHHHHHGGGEEEEEEEEESSTTCTTCTHH
T ss_pred hcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cc---hHHHHHHHHHHHhCCCcEEEEcCCCCCCChHH
Confidence 338899998643 33 245679999994322 11 2456788899999999999999964211 234
Q ss_pred HHHHHHHHHHcCCEEEEEEec
Q 043503 387 NETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 387 ~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
.+.+.+.+.+.|.++.+....
T Consensus 227 ~~A~~ef~~~~~~~i~~~p~~ 247 (257)
T 3tos_A 227 NIAMRKVLGLDHAPLRLLPGR 247 (257)
T ss_dssp HHHHHHHTCTTSSCCEECTTC
T ss_pred HHHHHHHHhhCCCeEEEccCC
Confidence 566788888888877765433
No 324
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=89.97 E-value=0.51 Score=47.11 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=40.3
Q ss_pred cEEEEEcCCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHh---cCCeeEEEcccccC
Q 043503 278 RIGLDIGGGTGTFAARMRER--NVTIITTSLNLDGPFNSFIAS---RGLISMHISVSQRL 332 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~---rg~i~~~~~d~~~l 332 (430)
..|||||.|.|.++..|+++ ..+|+++ +++..+....++ .+.+.++.+|+-.+
T Consensus 60 ~~VlEIGPG~G~LT~~Ll~~~~~~~vvav--E~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 60 LKVLDLYPGVGIQSAIFYNKYCPRQYSLL--EKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCCSEEEEE--CCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CEEEEECCCCCHHHHHHHhhCCCCEEEEE--ecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 56799999999999999986 5689988 555666555543 35688888887544
No 325
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=89.86 E-value=2.3 Score=41.85 Aligned_cols=125 Identities=12% Similarity=0.104 Sum_probs=72.0
Q ss_pred EEEEEcCCccHHHHHHHHcCC--EE-EEEecCCChhHHHHHHhc-CCeeEEEcccccCC---CCCCceeEEEEccchhhc
Q 043503 279 IGLDIGGGTGTFAARMRERNV--TI-ITTSLNLDGPFNSFIASR-GLISMHISVSQRLP---FFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~--~V-v~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lp---f~d~sfDlV~~~~~L~~~ 351 (430)
+++|+-||.|.+...+.+.|. ++ .++ |+++...+.-+.+ +...++.+|...+. ++...+|+++.+..--.+
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~--e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~f 82 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAV--DINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPF 82 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEE--CCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCS
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEE--eCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcch
Confidence 469999999999999988875 54 455 6666666555544 33456777877664 223368999974221011
Q ss_pred --------CCchhHHHHHHHHHHh---cc-CCcEEEEeeccc-cCcCcHHHHHHHHHHcCCEEEEEEec
Q 043503 352 --------IPDSMLEFTLYDIYRL---LR-PGGIFWLDRFFC-FGSQLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 352 --------~~d~~l~~~L~ei~Rv---Lr-PGG~lvl~~f~~-~~~~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
..+ ....++.++.|+ ++ |. +|++...-. ......+.+.+.+++.||.+....+.
T Consensus 83 S~ag~~~~~~d-~r~~L~~~~~r~i~~~~~P~-~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~~vl~ 149 (333)
T 4h0n_A 83 TRNGKYLDDND-PRTNSFLYLIGILDQLDNVD-YILMENVKGFENSTVRNLFIDKLKECNFIYQEFLLC 149 (333)
T ss_dssp EETTEECCTTC-TTSCCHHHHHHHGGGCTTCC-EEEEEECTTGGGSHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred hhhhhccCCcC-cccccHHHHHHHHHHhcCCC-EEEEecchhhhhhhHHHHHHHHHHhCCCeEEEEEec
Confidence 111 112234444444 44 64 333322111 11223567888999999987654433
No 326
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=89.84 E-value=1.3 Score=42.90 Aligned_cols=91 Identities=15% Similarity=0.072 Sum_probs=57.3
Q ss_pred cEEEEEcCC--ccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccch
Q 043503 278 RIGLDIGGG--TGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcG--tG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L 348 (430)
++||-+|+| .|..+..+++. |++|++++. ++...+.+++-|.-.++......+. .....+|+|+.+-.-
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTR--NNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTCEEEEEES--SSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC--CHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 456999986 57778777775 999998854 4555677777665333322111111 123479999984322
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
. .+.+..+.|+|||.+++....
T Consensus 224 ~----------~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 224 P----------DGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp H----------HHHHHHHTEEEEEEEEECCCT
T ss_pred h----------hHHHHHHHhcCCCEEEEEeec
Confidence 1 123445899999999886543
No 327
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.29 E-value=1.9 Score=46.15 Aligned_cols=63 Identities=19% Similarity=0.139 Sum_probs=41.2
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
+..||+++.-..-..-.|+-=...++..+.++++|||.+.-. .+ ...+...+.++||.+.+..
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~--~~-----~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF--TS-----AGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES--CC-----CHHHHHHHHHHTCEEEEEE
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec--cC-----cHHHHHHHHhCCeEEEecc
Confidence 467999998321111011111246899999999999987642 22 2457788899999987754
No 328
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=89.17 E-value=2 Score=41.77 Aligned_cols=100 Identities=12% Similarity=0.019 Sum_probs=66.1
Q ss_pred CccEEEEEcCCccHHHHHHHH-cCCEEEEEecCCChhHHHHHH----h-----cCCeeEEEcccccCC---------CCC
Q 043503 276 TIRIGLDIGGGTGTFAARMRE-RNVTIITTSLNLDGPFNSFIA----S-----RGLISMHISVSQRLP---------FFE 336 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La~-~g~~Vv~vdiD~s~~~le~a~----~-----rg~i~~~~~d~~~lp---------f~d 336 (430)
.++.|+++|||-=+.+.++.. .+.+++-+ |. +..++..+ + .+...++..|+.. . |..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~~~~~~v~ev--D~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDWPTGTTVYEI--DQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDP 177 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCCCTTCEEEEE--EC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCT
T ss_pred CCCeEEEeCCCCCchhhhccCCCCcEEEEc--CC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCC
Confidence 346789999999999888873 35777766 43 55443322 1 2235667777654 2 111
Q ss_pred CceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 337 NTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 337 ~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..-=++++-.++ ++++++....++..+...+.||+++++++..
T Consensus 178 ~~Pt~~i~Egvl-~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 178 SARTAWLAEGLL-MYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp TSCEEEEECSCG-GGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCCEEEEEechH-hhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 222345554555 6777777889999999999999999998654
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.54 E-value=3.2 Score=40.69 Aligned_cols=91 Identities=12% Similarity=-0.057 Sum_probs=59.6
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEccc--ccCC-----CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVS--QRLP-----FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~--~~lp-----f~d~sfDlV~~~~~ 347 (430)
.+||-+|+|. |.+++.+++. |+ +|+++ +.++.-.+.+++-|.-.++.... +.+. ..++.+|+|+..-.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGV--GTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEE--CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEE--CCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 4568888864 7778888776 88 78888 56677778888777633332211 1110 11247999997421
Q ss_pred hhhcCCchhHHHHHHHHHHhccCC-cEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPG-GIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPG-G~lvl~~f 379 (430)
. ...+....++|++| |.+++...
T Consensus 271 ~---------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 R---------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp C---------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred C---------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 1 23577888999999 99987653
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.52 E-value=2.3 Score=41.86 Aligned_cols=91 Identities=13% Similarity=0.031 Sum_probs=59.9
Q ss_pred EEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcc--cccCC-----CCCCceeEEEEccch
Q 043503 279 IGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISV--SQRLP-----FFENTLDIVHSMHVL 348 (430)
Q Consensus 279 ~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d--~~~lp-----f~d~sfDlV~~~~~L 348 (430)
+||=+|+|. |.++..+++. |+ +|+++ +.++.-++.+++-|.-.++... ...+. ..++.+|+|+..-.-
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~ 273 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTAGASRIIGI--DIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGN 273 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEE--CSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCC
Confidence 458788864 7788888876 88 78888 6566677888877764333221 11111 123479999974221
Q ss_pred hhcCCchhHHHHHHHHHHhccCC-cEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPG-GIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPG-G~lvl~~f~ 380 (430)
...+....+.|++| |.+++....
T Consensus 274 ---------~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 274 ---------VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp ---------HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred ---------HHHHHHHHHHhhccCCEEEEEccc
Confidence 24678889999997 999876543
No 331
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=88.51 E-value=2 Score=41.37 Aligned_cols=91 Identities=8% Similarity=-0.026 Sum_probs=56.6
Q ss_pred ccEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEccc-ccCC-----CCCCceeEEEEccc
Q 043503 277 IRIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVS-QRLP-----FFENTLDIVHSMHV 347 (430)
Q Consensus 277 ir~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~-~~lp-----f~d~sfDlV~~~~~ 347 (430)
.++||-.|+ |.|..++.++.. |++|+++ +.++...+.+++.|.-..+.... +.+. ...+.+|+|+.+-.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~--~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 223 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGA--AGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 356799997 566666666654 9999988 44566667675556422221111 1110 11247999988432
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
. ..+....+.|+|||.+++...
T Consensus 224 ~----------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 224 G----------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp H----------HHHHHHHTTEEEEEEEEECCC
T ss_pred h----------HHHHHHHHHHhcCCEEEEEec
Confidence 1 246788899999999987653
No 332
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.48 E-value=1.2 Score=43.85 Aligned_cols=91 Identities=11% Similarity=0.013 Sum_probs=59.3
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L~ 349 (430)
.+||-+|+|. |.++..+++. |++|+++ +.++.-.+.+++-|.-.++..+...+. .....+|+|+..-.
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-- 266 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATGAEVIVT--SSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-- 266 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT--
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEE--ecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC--
Confidence 4568888765 6777777765 9999988 556677777877776433332111111 12347999997422
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
.. .+....++|+|||.+++....
T Consensus 267 ---~~-----~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 267 ---GA-----GLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp ---SS-----CHHHHHHHEEEEEEEEEECCC
T ss_pred ---hH-----HHHHHHHHhhcCCEEEEEecC
Confidence 11 356778899999999876543
No 333
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.31 E-value=2.9 Score=41.06 Aligned_cols=91 Identities=13% Similarity=0.024 Sum_probs=59.1
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEccc--ccCC-----CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVS--QRLP-----FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~--~~lp-----f~d~sfDlV~~~~~ 347 (430)
.+||-+|+|. |.++..+++. |+ +|+++ +.++.-.+.+++-|.-.++.... +.+. ...+.+|+|+..-.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAGAKRIIAV--DLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEE--CSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEE--cCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 4568888764 6777777775 88 78888 66677778888777633332111 1111 11236999987422
Q ss_pred hhhcCCchhHHHHHHHHHHhccCC-cEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPG-GIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPG-G~lvl~~f 379 (430)
. ...+....++|+|| |.+++...
T Consensus 272 ~---------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 N---------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp C---------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred C---------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 1 23577889999999 99987653
No 334
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=88.13 E-value=3.6 Score=40.39 Aligned_cols=91 Identities=10% Similarity=-0.009 Sum_probs=58.9
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEccc--ccCC-----CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVS--QRLP-----FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~--~~lp-----f~d~sfDlV~~~~~ 347 (430)
.+||-+|+|. |.+++.+++. |+ +|+++ +.++.-.+.+++-|.-.++.... +.+. ..++.+|+|+..-.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAGAARIIGV--DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEE--CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 4568888765 6777777765 88 78888 65677778887777633332211 1110 11247999987421
Q ss_pred hhhcCCchhHHHHHHHHHHhccCC-cEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPG-GIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPG-G~lvl~~f 379 (430)
. ...+....++|++| |.+++...
T Consensus 271 ~---------~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 R---------LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp C---------HHHHHHHHHHBCTTTCEEEECSC
T ss_pred C---------HHHHHHHHHHhhcCCcEEEEecc
Confidence 1 23577888999999 99987553
No 335
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=88.10 E-value=1.4 Score=43.72 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=62.1
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEccccc-----CC--CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVSQR-----LP--FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~-----lp--f~d~sfDlV~~~~~ 347 (430)
.+||-+|+|. |.++..+++. |+ +|+++ +.++.-++.+++-|. ..+...... +. .....+|+|+..-.
T Consensus 187 ~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~--~~~~~~~~~a~~lGa-~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G 263 (398)
T 1kol_A 187 STVYVAGAGPVGLAAAASARLLGAAVVIVG--DLNPARLAHAKAQGF-EIADLSLDTPLHEQIAALLGEPEVDCAVDAVG 263 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHTTC-EEEETTSSSCHHHHHHHHHSSSCEEEEEECCC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCeEEEE--cCCHHHHHHHHHcCC-cEEccCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence 3458899866 7888888876 87 68877 566777888887776 333221111 10 12246999998533
Q ss_pred hhh--------cCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 348 LSN--------WIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 348 L~~--------~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
... ..++ ....+.+..++|++||.+++....
T Consensus 264 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~G~iv~~G~~ 302 (398)
T 1kol_A 264 FEARGHGHEGAKHEA--PATVLNSLMQVTRVAGKIGIPGLY 302 (398)
T ss_dssp TTCBCSSTTGGGSBC--TTHHHHHHHHHEEEEEEEEECSCC
T ss_pred Ccccccccccccccc--hHHHHHHHHHHHhcCCEEEEeccc
Confidence 210 0111 224688899999999999876543
No 336
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.10 E-value=3.4 Score=40.44 Aligned_cols=91 Identities=10% Similarity=0.000 Sum_probs=59.1
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEccc--ccCC-----CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVS--QRLP-----FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~--~~lp-----f~d~sfDlV~~~~~ 347 (430)
.+||-+|+|. |.++..+++. |+ +|+++ +.++.-.+.+++-|.-.++.... +.+. ..++.+|+|+..-.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAGASRIIGV--DINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEE--CSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 4568888765 6777777776 88 78888 55677778887777633332211 1110 11247999987422
Q ss_pred hhhcCCchhHHHHHHHHHHhccCC-cEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPG-GIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPG-G~lvl~~f 379 (430)
. ...+....+.|+|| |.+++...
T Consensus 270 ~---------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 N---------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp C---------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred c---------HHHHHHHHHhhccCCcEEEEEec
Confidence 1 23577889999999 99987653
No 337
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=87.78 E-value=1.2 Score=43.06 Aligned_cols=91 Identities=10% Similarity=0.004 Sum_probs=58.4
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHH-HhcCCeeEEEcccccCC-----CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFI-ASRGLISMHISVSQRLP-----FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a-~~rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L 348 (430)
++||-+|+ |.|..+..++.. |++|+++ +.++.-.+.+ ++-|.-.++......+. ...+.+|+|+.+-.-
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKGCRVVGI--AGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 45699997 567777777765 9999988 5556666776 55565333322111110 113579999884221
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+....+.|++||.+++....
T Consensus 229 ----------~~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 229 ----------EILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp ----------HHHHHHHTTEEEEEEEEECCCG
T ss_pred ----------chHHHHHHHHhhCCEEEEEeec
Confidence 2577888999999999886543
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.70 E-value=2.6 Score=42.07 Aligned_cols=97 Identities=9% Similarity=-0.017 Sum_probs=57.0
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccch
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L 348 (430)
.+||=+|+|. |.++..+++. |+ +|+++ +.++.-++.+++-|.-.++......+. .....+|+|+-.-.-
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGASKVILS--EPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 3457788754 6777777776 88 88888 666777888887776433322111111 123469999974222
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
. .......+.-+.+++++||.+++....
T Consensus 293 ~----~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 293 P----QLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp H----HHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred c----HHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 1 001222233333555999999886543
No 339
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.58 E-value=2 Score=41.38 Aligned_cols=91 Identities=14% Similarity=0.004 Sum_probs=59.5
Q ss_pred cEEEEEc--CCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccch
Q 043503 278 RIGLDIG--GGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIG--cGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L 348 (430)
.+||-+| +|.|..+..+++. |++|+++ +.++.-++.+++.|.-..+......+. .....+|+|+.+-.-
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~--~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALGAKLIGT--VSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTCEEEEE--ESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 4568888 4567778777776 9999988 456667777777775333322211111 123579999984322
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+....+.|+|||.+++....
T Consensus 220 ----------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 220 ----------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp ----------GGHHHHHTTEEEEEEEEECCCT
T ss_pred ----------HHHHHHHHHhcCCCEEEEEecC
Confidence 2466788999999999886543
No 340
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=87.55 E-value=1.6 Score=42.55 Aligned_cols=91 Identities=13% Similarity=0.093 Sum_probs=58.3
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccch
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L 348 (430)
.+||-+|+|. |.+++.+++. |+ +|+++ +.++...+.+++.|.-.++......+. .....+|+|+..-..
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~--~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVS--EPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEE--CSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 3458898853 6777777765 88 89888 556777777777675333322111110 122469999974221
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
...+....+.|++||.+++...
T Consensus 247 ---------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 ---------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp ---------HHHHHHHHHHEEEEEEEEECCC
T ss_pred ---------HHHHHHHHHHHhcCCEEEEEcc
Confidence 2357788899999999987543
No 341
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=87.51 E-value=1.8 Score=42.54 Aligned_cols=91 Identities=19% Similarity=0.164 Sum_probs=59.5
Q ss_pred cEEEEEc--CCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC-----CCCCceeEEEEccchh
Q 043503 278 RIGLDIG--GGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP-----FFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIG--cGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L~ 349 (430)
.+||-+| +|.|..+..+++. |++|+++ +.++...+.+++.|.-.++......+. ...+.+|+|+..-.-
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~--~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGT--CSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEEEE--ECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 4569898 5678888888775 8999888 455666777777665333322111110 112469999874221
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+..+.++|++||.+++....
T Consensus 242 ---------~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 242 ---------AMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp ---------HHHHHHHHHEEEEEEEEECCCG
T ss_pred ---------HHHHHHHHHHhcCCEEEEEeCC
Confidence 3577888999999999876543
No 342
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.38 E-value=1 Score=44.50 Aligned_cols=88 Identities=15% Similarity=0.137 Sum_probs=57.9
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcc----cccCCCCCCceeEEEEccchhhc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISV----SQRLPFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d----~~~lpf~d~sfDlV~~~~~L~~~ 351 (430)
.+||-+|+|. |.++..+++. |++|+++ +.++...+.+++-|.-.++... .+.+. +.+|+|+..-..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g~--- 267 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAF--TTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVAA--- 267 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--ESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCSS---
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCCC---
Confidence 4468899875 7788888775 8998888 4556667778777753333221 11221 579999974222
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
+. .+....++|+|||.+++...
T Consensus 268 -~~-----~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 268 -PH-----NLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -CC-----CHHHHHTTEEEEEEEEECCC
T ss_pred -HH-----HHHHHHHHhccCCEEEEecc
Confidence 11 35677889999999987543
No 343
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=87.15 E-value=2.7 Score=40.55 Aligned_cols=90 Identities=11% Similarity=-0.030 Sum_probs=58.2
Q ss_pred ccEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccc
Q 043503 277 IRIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHV 347 (430)
Q Consensus 277 ir~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~ 347 (430)
-++||-+|+ |.|..+..+++. |++|+++ +.++.-++.+++-|.-.++......+. .....+|+|+.+-.
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~--~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAV--ASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence 345698884 556777777765 9999988 455666777777775333332211111 12346999998432
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
- ..+....+.|+|||.+++..
T Consensus 227 ~----------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 227 K----------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp G----------GGHHHHHHHEEEEEEEEECC
T ss_pred h----------HHHHHHHHHhccCCEEEEEc
Confidence 1 24667788999999998754
No 344
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=86.96 E-value=3.8 Score=40.25 Aligned_cols=91 Identities=14% Similarity=-0.002 Sum_probs=58.9
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEccc--ccCC-----CCCCceeEEEEccc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVS--QRLP-----FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~--~~lp-----f~d~sfDlV~~~~~ 347 (430)
.+||-+|+|. |.+++.+++. |+ +|+++ +.++.-.+.+++-|.-.++.... +.+. ..++.+|+|+..-.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAGASRIIAI--DINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEE--CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 4568888764 6777777776 88 78888 55677778887777633332111 1110 11237999987421
Q ss_pred hhhcCCchhHHHHHHHHHHhccCC-cEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPG-GIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPG-G~lvl~~f 379 (430)
. ...+....+.|++| |.+++...
T Consensus 275 ~---------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 T---------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp C---------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred C---------HHHHHHHHHHhhcCCCEEEEECC
Confidence 1 23577889999999 99987543
No 345
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=86.83 E-value=1.4 Score=42.30 Aligned_cols=83 Identities=13% Similarity=0.085 Sum_probs=55.3
Q ss_pred cEEEEEcCC-ccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGG-TGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcG-tG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
.+||=+|+| .|.++..+++. |++|++++ ++.-.+.+++-|.-.++ .|.+.+ .+.+|+|+-.-.-
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~---~~~~~~~~~~lGa~~v~-~d~~~v---~~g~Dvv~d~~g~------- 209 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAGYVVDLVS---ASLSQALAAKRGVRHLY-REPSQV---TQKYFAIFDAVNS------- 209 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEC---SSCCHHHHHHHTEEEEE-SSGGGC---CSCEEEEECC----------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEE---ChhhHHHHHHcCCCEEE-cCHHHh---CCCccEEEECCCc-------
Confidence 456888885 37888888876 99999884 55667778777763333 233333 5679999874221
Q ss_pred hHHHHHHHHHHhccCCcEEEEe
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
..+....++|+|||.+++.
T Consensus 210 ---~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 210 ---QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp -------TTGGGEEEEEEEEEE
T ss_pred ---hhHHHHHHHhcCCCEEEEE
Confidence 1125678999999999875
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=86.12 E-value=2 Score=41.74 Aligned_cols=90 Identities=11% Similarity=-0.057 Sum_probs=57.7
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC----C--CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL----P--FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l----p--f~d~sfDlV~~~~~L 348 (430)
.+||-+|+ |.|..+..++.. |++|+++ +.++...+.+++.|.-.++......+ . .....+|+|+..-.
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~--~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 244 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFGARVIAT--AGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG- 244 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC-
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 46799997 678888887765 8999888 44566667776656432222111111 0 11247999998532
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
. . .+..+.+.|++||.+++...
T Consensus 245 ~----~-----~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 245 A----L-----YFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp S----S-----SHHHHHHHEEEEEEEEESSC
T ss_pred H----H-----HHHHHHHhhccCCEEEEEec
Confidence 1 1 35677889999999987543
No 347
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.65 E-value=1.7 Score=42.27 Aligned_cols=88 Identities=18% Similarity=0.107 Sum_probs=57.3
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L 348 (430)
++||-+|+ |.|..+..+++. |++|++++ .++.-.+.+++-|.-.++... ..+. .....+|+|+..-.-
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~--~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVV--NRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGG 237 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEE--SSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCch
Confidence 45698986 567788777776 99999884 455666777776763333222 2211 123479999984322
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
..+....+.|++||.+++..
T Consensus 238 ----------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 238 ----------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp -----------CHHHHHHTEEEEEEEEEC-
T ss_pred ----------hHHHHHHHhhcCCCEEEEEE
Confidence 13667889999999998754
No 348
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.27 E-value=7.8 Score=37.43 Aligned_cols=88 Identities=17% Similarity=0.150 Sum_probs=58.0
Q ss_pred cEEEEEcCCc--cHHHHHHHHcCC--EEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGGT--GTFAARMRERNV--TIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcGt--G~~a~~La~~g~--~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
.+|.=||+|. +.++..+++.|. +|+++ |.++...+.+.+.|.+.-...+...+ .-...|+|+.. ++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~--dr~~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVila------vp 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGY--DINPESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLS------SP 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEE--CSCHHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEEC------SC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEE--ECCHHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEe------CC
Confidence 4557788875 356777777788 89888 66677777777777653333333320 01357999874 23
Q ss_pred chhHHHHHHHHHHhccCCcEEE
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lv 375 (430)
......++.++...++||..++
T Consensus 104 ~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 104 VRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GGGHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHHhhccCCCcEEE
Confidence 3346778899999999987553
No 349
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.20 E-value=2.2 Score=42.25 Aligned_cols=92 Identities=14% Similarity=0.088 Sum_probs=59.4
Q ss_pred cEEEEEcCC-ccHHHHHHHHc-C-CEEEEEecCCChhHHHHHHhcCCeeEEEcc---ccc----CC--CCCCceeEEEEc
Q 043503 278 RIGLDIGGG-TGTFAARMRER-N-VTIITTSLNLDGPFNSFIASRGLISMHISV---SQR----LP--FFENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcG-tG~~a~~La~~-g-~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d---~~~----lp--f~d~sfDlV~~~ 345 (430)
.+||-+|+| .|.+++.+++. | .+|+++ +.++.-.+.+++-|.-.++... ... +. .....+|+|+..
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAENVIVI--AGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBSEEEEE--ESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCceEEEE--cCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 456888865 46777777776 8 599988 5567777888877763333322 111 11 122369999974
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
-.. + ..+....++|+|||.+++....
T Consensus 275 ~g~----~-----~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 275 TGD----S-----RALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp SSC----T-----THHHHHHHHEEEEEEEEECCCC
T ss_pred CCC----H-----HHHHHHHHHHhcCCEEEEEecC
Confidence 221 1 2467888999999999886544
No 350
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=85.16 E-value=2.3 Score=41.29 Aligned_cols=91 Identities=13% Similarity=0.066 Sum_probs=61.0
Q ss_pred cEEEEEcCCc-cHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccch
Q 043503 278 RIGLDIGGGT-GTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L 348 (430)
.+||-+|+|. |.++..+++. +.+|+++ +.++.-.+.+++-|.-.++..+. .+. .....+|+|+..-.-
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~--~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~t~g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAV--DLDDDRLALAREVGADAAVKSGA-GAADAIRELTGGQGATAVFDFVGA 249 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEE--ESCHHHHHHHHHTTCSEEEECST-THHHHHHHHHGGGCEEEEEESSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEE--cCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHHhCCCCCeEEEECCCC
Confidence 3458888865 7788888875 6788888 56677788888877644433221 110 112379999984211
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
...+....++|+|||.+++....
T Consensus 250 ---------~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 250 ---------QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp ---------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred ---------HHHHHHHHHHHhcCCEEEEECCC
Confidence 23678899999999999876543
No 351
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=85.12 E-value=1.5 Score=42.63 Aligned_cols=91 Identities=14% Similarity=0.060 Sum_probs=56.7
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcc-cccCC-----CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISV-SQRLP-----FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d-~~~lp-----f~d~sfDlV~~~~~L 348 (430)
++||-+|+ |.|..+..++.. |.+|++++. ++...+.+++.|.-.++... .+.+. ..++.+|+|+.+-..
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~--~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG--GEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC--STTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCcEEEEcC--CHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 45799998 567777777664 899998854 44555666665652222111 11111 011269999884321
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
...+....+.|++||.+++...
T Consensus 249 ---------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 ---------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp ---------HHHHHHHTTSEEEEEEEEECCC
T ss_pred ---------HHHHHHHHHHHhcCCEEEEEeC
Confidence 2367888999999999987543
No 352
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=84.65 E-value=2.3 Score=39.94 Aligned_cols=77 Identities=8% Similarity=-0.054 Sum_probs=47.5
Q ss_pred eEEEccccc-CC-CCCCceeEEEEccchhhcCC-------c----hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHH
Q 043503 323 SMHISVSQR-LP-FFENTLDIVHSMHVLSNWIP-------D----SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNET 389 (430)
Q Consensus 323 ~~~~~d~~~-lp-f~d~sfDlV~~~~~L~~~~~-------d----~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~ 389 (430)
.++.+|+.. +. +++++||+|++......-.. . ..+...+.++.|+|+|||.+++.. .......
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~----~d~~~~~ 81 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN----TPFNCAF 81 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE----CHHHHHH
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc----CcHHHHH
Confidence 456666422 22 34678999999644311000 0 135678889999999999998863 1112234
Q ss_pred HHHHHHHcCCEEEE
Q 043503 390 YVPMLDRIGFKKLR 403 (430)
Q Consensus 390 ~~~ll~~~Gfk~l~ 403 (430)
+..++...||....
T Consensus 82 ~~~~~~~~gf~~~~ 95 (260)
T 1g60_A 82 ICQYLVSKGMIFQN 95 (260)
T ss_dssp HHHHHHHTTCEEEE
T ss_pred HHHHHHhhccceeE
Confidence 55677889998665
No 353
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=84.37 E-value=2.9 Score=40.46 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=57.1
Q ss_pred cEEEEEcCC-ccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC-----CCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGG-TGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP-----FFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcG-tG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L~~ 350 (430)
.+||-+|+| .|..+..+++. |++|+++ +.++...+.+++-|.-.++......+. .. +.+|+|+..-..
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~-~~~d~vid~~g~-- 240 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMGLNVVAV--DIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV-GGVHAAVVTAVS-- 240 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH-SSEEEEEESSCC--
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEE--eCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh-CCCCEEEECCCC--
Confidence 346888875 47777777765 8999988 666777777776665322211111110 01 469999874221
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
...+....++|++||.+++..
T Consensus 241 -------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 241 -------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp -------HHHHHHHHHHEEEEEEEEECC
T ss_pred -------HHHHHHHHHHhhcCCEEEEec
Confidence 235778889999999998754
No 354
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=84.13 E-value=2.6 Score=41.23 Aligned_cols=89 Identities=19% Similarity=0.159 Sum_probs=55.9
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC----C--CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL----P--FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l----p--f~d~sfDlV~~~~~L 348 (430)
++||-.|+ |.|..+..++.. |++|+++ +.++...+.+++.|.-..+......+ . .....+|+|+.+-.-
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~--~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAYGLKILGT--AGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN 249 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEE--eCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCCh
Confidence 45699996 566777776665 9999888 44566666776666532222211111 0 123469999884221
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
..+....++|+|||.+++..
T Consensus 250 ----------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 250 ----------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp ----------HHHHHHHHHEEEEEEEEECC
T ss_pred ----------HHHHHHHHhccCCCEEEEEe
Confidence 24667889999999998754
No 355
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=84.03 E-value=3.1 Score=39.75 Aligned_cols=89 Identities=12% Similarity=0.078 Sum_probs=59.9
Q ss_pred EEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEc-ccccC-CCCCCceeEEEEccchhhcCCc
Q 043503 280 GLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHIS-VSQRL-PFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 280 VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~-d~~~l-pf~d~sfDlV~~~~~L~~~~~d 354 (430)
||=+|+ |.|.++..+++. |++|+++ +.++.-.+.+++-|.-.++.. +.... ....+.+|+|+..-. .
T Consensus 150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------~ 221 (324)
T 3nx4_A 150 VVVTGASGGVGSTAVALLHKLGYQVAAV--SGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------D 221 (324)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCCEEEE--ESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC------H
T ss_pred EEEECCCcHHHHHHHHHHHHcCCEEEEE--eCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC------c
Confidence 588885 568888888876 9999988 445667788877775333322 11111 123457999887321 1
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+....+.|+|||.+++....
T Consensus 222 ----~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 222 ----KVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp ----HHHHHHHHTEEEEEEEEECCCT
T ss_pred ----HHHHHHHHHHhcCCEEEEEecC
Confidence 2688899999999999886543
No 356
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=83.97 E-value=4.3 Score=39.81 Aligned_cols=89 Identities=22% Similarity=0.264 Sum_probs=59.8
Q ss_pred ccEEEEEc--CCccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC-----CCCCCceeEEEEccc
Q 043503 277 IRIGLDIG--GGTGTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL-----PFFENTLDIVHSMHV 347 (430)
Q Consensus 277 ir~VLDIG--cGtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l-----pf~d~sfDlV~~~~~ 347 (430)
..+||=+| +|.|.++..+++. +.+|+++ +.++.-.+.+++-|.-.++... +.+ ....+.+|+|+..-.
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~--~~~~~~~~~~~~lGad~vi~~~-~~~~~~v~~~~~~g~Dvvid~~g 248 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIAT--ASRPETQEWVKSLGAHHVIDHS-KPLAAEVAALGLGAPAFVFSTTH 248 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEE--CSSHHHHHHHHHTTCSEEECTT-SCHHHHHHTTCSCCEEEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEE--eCCHHHHHHHHHcCCCEEEeCC-CCHHHHHHHhcCCCceEEEECCC
Confidence 34568887 4558888888874 7899988 6667777888777753333211 111 123457999987422
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
-...+..+.++|+|||.+++.
T Consensus 249 ---------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 ---------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ---------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ---------chhhHHHHHHHhcCCCEEEEE
Confidence 234678889999999999874
No 357
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=83.63 E-value=2.2 Score=41.46 Aligned_cols=90 Identities=18% Similarity=0.162 Sum_probs=58.8
Q ss_pred cEEEEEcCCc-cHHHHHHHH-c--CCEEEEEecCCChhHHHHHHhcCCeeEEEccc-----ccCCCCCCceeEEEEccch
Q 043503 278 RIGLDIGGGT-GTFAARMRE-R--NVTIITTSLNLDGPFNSFIASRGLISMHISVS-----QRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~-~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~-----~~lpf~d~sfDlV~~~~~L 348 (430)
.+||-+|+|. |.++..+++ . |++|+++ +.++.-.+.+++.|.-.++.... ..+. ....+|+|+..-..
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g~ 248 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIVGI--SRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVGT 248 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEE--CSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEEEE--eCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCCC
Confidence 3469899864 677777765 4 8898887 66677778887777533332111 1111 12379999984221
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
...+..+.++|+|||.+++...
T Consensus 249 ---------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 249 ---------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp ---------HHHHHHHHHHEEEEEEEEECCC
T ss_pred ---------hHHHHHHHHHhhcCCEEEEeCC
Confidence 2357788899999999987543
No 358
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.41 E-value=2.6 Score=40.46 Aligned_cols=91 Identities=14% Similarity=-0.035 Sum_probs=56.4
Q ss_pred ccEEEEEc--CCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC----C--CCCCceeEEEEccc
Q 043503 277 IRIGLDIG--GGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL----P--FFENTLDIVHSMHV 347 (430)
Q Consensus 277 ir~VLDIG--cGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l----p--f~d~sfDlV~~~~~ 347 (430)
-++||-.| +|.|..+..++.. |++|+++ +.++...+.+++.|.-..+......+ . .....+|+|+.+-.
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGT--VGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEE--ESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEE--eCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence 35679998 4566666666665 9999988 44566666666655422222111111 0 12346999998533
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
. ..+....++|++||.+++...
T Consensus 219 -~---------~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 219 -R---------DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp -G---------GGHHHHHHTEEEEEEEEECCC
T ss_pred -h---------HHHHHHHHHhcCCCEEEEEec
Confidence 1 246788899999999987653
No 359
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=83.22 E-value=3.4 Score=40.32 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=56.8
Q ss_pred cEEEEEcCCc-cHHH-HHHH-Hc-CCE-EEEEecCCChh---HHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEc
Q 043503 278 RIGLDIGGGT-GTFA-ARMR-ER-NVT-IITTSLNLDGP---FNSFIASRGLISMHISVSQRLP----FFENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGt-G~~a-~~La-~~-g~~-Vv~vdiD~s~~---~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~ 345 (430)
.+||-+|+|. |.++ ..++ +. |++ |++++. ++. -.+.+++-|.-.+ ....+.+. . .+.+|+|+-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~--~~~~~~~~~~~~~lGa~~v-~~~~~~~~~i~~~-~gg~Dvvid~ 249 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGR--RDRPDPTIDIIEELDATYV-DSRQTPVEDVPDV-YEQMDFIYEA 249 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEEC--CCSSCHHHHHHHHTTCEEE-ETTTSCGGGHHHH-SCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeC--CcccHHHHHHHHHcCCccc-CCCccCHHHHHHh-CCCCCEEEEC
Confidence 3458888743 7777 7888 55 886 888854 344 5677777675333 21111110 1 2379999874
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
-.. ...+.+..++|+|||.+++....
T Consensus 250 ~g~---------~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 250 TGF---------PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp SCC---------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCC---------hHHHHHHHHHHhcCCEEEEEeCC
Confidence 221 23577889999999999886544
No 360
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.90 E-value=18 Score=34.54 Aligned_cols=93 Identities=14% Similarity=0.054 Sum_probs=58.7
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEE-EEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccch
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTI-ITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~V-v~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L 348 (430)
.+||=.|+|. |.++..+++. |..+ +++ +.++.-++.+++-|....+...-...+ .....+|+|+..-..
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~--~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G~ 239 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALGAKSVTAI--DISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGV 239 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSCS
T ss_pred CEEEEECCCCcchHHHHHHHHcCCcEEEEE--echHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccccc
Confidence 4457788865 4566666665 7654 555 666777888888887544433221111 123457888774211
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeeccc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFC 381 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~ 381 (430)
...+....++|++||.+++.....
T Consensus 240 ---------~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 240 ---------PQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp ---------HHHHHHHHHHCCTTCEEEECCCCS
T ss_pred ---------cchhhhhhheecCCeEEEEEeccC
Confidence 245778889999999998866543
No 361
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=82.45 E-value=2.1 Score=41.89 Aligned_cols=91 Identities=11% Similarity=0.094 Sum_probs=55.8
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccc-cCC--CCCCceeEEEEccchhhcC
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQ-RLP--FFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~-~lp--f~d~sfDlV~~~~~L~~~~ 352 (430)
.+||-+|+|. |.++..+++. |++|++++ .++.-.+.+++-|.-.++..... .+. .. +.+|+|+..-....
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~--~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g~~~-- 255 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVIS--RSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCASSLT-- 255 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEE--SSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCSCST--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEc--CCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCCCCc--
Confidence 4569999754 7777777775 99998884 44555677777675333322111 110 11 47999997432200
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEee
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
+ ..+....++|+|||.+++..
T Consensus 256 ~-----~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 256 D-----IDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp T-----CCTTTGGGGEEEEEEEEECC
T ss_pred H-----HHHHHHHHHhcCCCEEEEec
Confidence 1 12446678999999988643
No 362
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=82.43 E-value=5.4 Score=38.41 Aligned_cols=91 Identities=10% Similarity=0.027 Sum_probs=57.6
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHH-hcCCeeEEEc-ccccCC-----CCCCceeEEEEccc
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIA-SRGLISMHIS-VSQRLP-----FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~-~rg~i~~~~~-d~~~lp-----f~d~sfDlV~~~~~ 347 (430)
++||-+|+ |.|..+..++.. |++|+++ +.++...+.++ +-|.-..+.. +...+. ...+.+|+|+.+-.
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~--~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGS--AGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 45799996 567777777765 8999888 45566667776 4454222211 111111 11246999987422
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
. ..+....+.|+|||.+++....
T Consensus 235 ~----------~~~~~~~~~l~~~G~~v~~G~~ 257 (345)
T 2j3h_A 235 G----------KMLDAVLVNMNMHGRIAVCGMI 257 (345)
T ss_dssp H----------HHHHHHHTTEEEEEEEEECCCG
T ss_pred H----------HHHHHHHHHHhcCCEEEEEccc
Confidence 1 2577888999999999876543
No 363
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=82.40 E-value=2.5 Score=41.01 Aligned_cols=92 Identities=22% Similarity=0.196 Sum_probs=57.2
Q ss_pred cEEEEEcCC--ccHHHHHHHH-c-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC----C-CCC-CceeEEEEccc
Q 043503 278 RIGLDIGGG--TGTFAARMRE-R-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL----P-FFE-NTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGcG--tG~~a~~La~-~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l----p-f~d-~sfDlV~~~~~ 347 (430)
++||-+|+| .|..+..++. . |++|+++ +.++...+.+++.|.-.++....... . ... +.+|+|+..-.
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 249 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGV--DVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 249 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEEEEE--ESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CEEEEECCCccHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCC
Confidence 457999987 5566666654 4 8999888 45566667776666532322111111 0 112 47999997422
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
- ...+....++|+|||.+++....
T Consensus 250 ~---------~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 250 S---------EKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp C---------HHHHTTGGGGEEEEEEEEECCSS
T ss_pred C---------HHHHHHHHHHHhcCCEEEEECCC
Confidence 1 23567888999999999876543
No 364
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=82.02 E-value=3.7 Score=40.06 Aligned_cols=91 Identities=12% Similarity=-0.025 Sum_probs=56.1
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC----C--CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL----P--FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l----p--f~d~sfDlV~~~~~L 348 (430)
.+||-.|+ |.|..++.++.. |++|+++ +.++...+.+++.|.-..+......+ . .....+|+|+.+-.-
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVT--AGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEE--eCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence 45688883 566776666655 8999888 44566667776656422222111110 0 123469999875322
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+....++|++||.+++....
T Consensus 242 ----------~~~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 242 ----------SYWEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp ----------GGHHHHHHHEEEEEEEEECCCT
T ss_pred ----------hHHHHHHHhccCCCEEEEEecc
Confidence 1356778899999999886543
No 365
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=81.76 E-value=6.6 Score=38.17 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=56.5
Q ss_pred EEEEcCCc-cHHHHHHHHc-CCE-EEEEecCCChhHHHHHHhcCC--eeEEEccc--cc----CC--CCCCceeEEEEcc
Q 043503 280 GLDIGGGT-GTFAARMRER-NVT-IITTSLNLDGPFNSFIASRGL--ISMHISVS--QR----LP--FFENTLDIVHSMH 346 (430)
Q Consensus 280 VLDIGcGt-G~~a~~La~~-g~~-Vv~vdiD~s~~~le~a~~rg~--i~~~~~d~--~~----lp--f~d~sfDlV~~~~ 346 (430)
||=+|+|. |.++..+++. |++ |+++ +.++.-.+.+++.+. +.+...+. +. +. .....+|+|+..-
T Consensus 183 VlV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~ 260 (363)
T 3m6i_A 183 VLICGAGPIGLITMLCAKAAGACPLVIT--DIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECT 260 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEE--ESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECS
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEECC
Confidence 47788765 7788888876 886 8877 556766777766532 22221110 11 10 1245799999842
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
.- ...+....++|++||.+++....
T Consensus 261 g~---------~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 261 GV---------ESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CC---------HHHHHHHHHHSCTTCEEEECCCC
T ss_pred CC---------hHHHHHHHHHhcCCCEEEEEccC
Confidence 21 23577888999999999886543
No 366
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=81.51 E-value=7 Score=40.45 Aligned_cols=122 Identities=13% Similarity=0.097 Sum_probs=68.0
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcC----CeeEEEcccccCCCC-----------------CC
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRG----LISMHISVSQRLPFF-----------------EN 337 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg----~i~~~~~d~~~lpf~-----------------d~ 337 (430)
+++|+-||.|.+...+.+.|.+++.. +|+++...+.-+.+- ...++.+|...+... -.
T Consensus 90 ~viDLFaG~GGlslG~~~aG~~~v~a-vE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~~ 168 (482)
T 3me5_A 90 RFIDLFAGIGGIRRGFESIGGQCVFT-SEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIP 168 (482)
T ss_dssp EEEEESCTTSHHHHHHHTTTEEEEEE-ECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHSC
T ss_pred eEEEecCCccHHHHHHHHCCCEEEEE-EeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcCC
Confidence 56999999999999998888875432 366665555444442 234566776554311 13
Q ss_pred ceeEEEEccchhhcC-----------------Cc--hhHHHHHHHHHHhccCCcEEEEee---ccc-cCcCcHHHHHHHH
Q 043503 338 TLDIVHSMHVLSNWI-----------------PD--SMLEFTLYDIYRLLRPGGIFWLDR---FFC-FGSQLNETYVPML 394 (430)
Q Consensus 338 sfDlV~~~~~L~~~~-----------------~d--~~l~~~L~ei~RvLrPGG~lvl~~---f~~-~~~~~~~~~~~ll 394 (430)
.+|+|+....--.+. .+ ..+-.-+.++.+.++|. +|++.. +.. ......+.+...+
T Consensus 169 ~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk-~fvlENV~gl~s~~~g~~f~~i~~~L 247 (482)
T 3me5_A 169 EHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPA-MFVLENVKNLKSHDKGKTFRIIMQTL 247 (482)
T ss_dssp CCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCS-EEEEEEETTTTTGGGGHHHHHHHHHH
T ss_pred CCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCc-EEEEeCcHHHhcccCCcHHHHHHHHH
Confidence 589998742210111 01 11222333344556785 333322 111 1122456788889
Q ss_pred HHcCCEEE
Q 043503 395 DRIGFKKL 402 (430)
Q Consensus 395 ~~~Gfk~l 402 (430)
+..||.+.
T Consensus 248 ~~lGY~v~ 255 (482)
T 3me5_A 248 DELGYDVA 255 (482)
T ss_dssp HHTTEEET
T ss_pred hcCCcEEE
Confidence 99999863
No 367
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=80.21 E-value=18 Score=29.70 Aligned_cols=107 Identities=8% Similarity=0.065 Sum_probs=59.5
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhhcC
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~~~ 352 (430)
+++=+|+|. | .++..|.+.|.+|+.+| .++...+.+.+.+ +.++.+|..... ..-..+|+|+..-.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id--~~~~~~~~~~~~~-~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~----- 79 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVD--KSKEKIELLEDEG-FDAVIADPTDESFYRSLDLEGVSAVLITGS----- 79 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEE--SCHHHHHHHHHTT-CEEEECCTTCHHHHHHSCCTTCSEEEECCS-----
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEE--CCHHHHHHHHHCC-CcEEECCCCCHHHHHhCCcccCCEEEEecC-----
Confidence 347788854 2 24444455599999884 4566666666655 466677654421 12346898887422
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEE
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l 402 (430)
+......+....+-+. .+.++..- .. ....+.+.+.|...+
T Consensus 80 -~~~~n~~~~~~a~~~~-~~~iia~~---~~----~~~~~~l~~~G~~~v 120 (141)
T 3llv_A 80 -DDEFNLKILKALRSVS-DVYAIVRV---SS----PKKKEEFEEAGANLV 120 (141)
T ss_dssp -CHHHHHHHHHHHHHHC-CCCEEEEE---SC----GGGHHHHHHTTCSEE
T ss_pred -CHHHHHHHHHHHHHhC-CceEEEEE---cC----hhHHHHHHHcCCCEE
Confidence 2223445555666666 55554421 11 223456778886533
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=79.99 E-value=3.7 Score=40.02 Aligned_cols=91 Identities=16% Similarity=0.035 Sum_probs=57.9
Q ss_pred cEEEEEc--CCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC-----CCCCceeEEEEccchh
Q 043503 278 RIGLDIG--GGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP-----FFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIG--cGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L~ 349 (430)
++||-+| +|.|..+..+++. |++|+++ +.++...+.+++-|.-.++......+. ...+.+|+|+.+-.-
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFGAEVYAT--AGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCEEEEE--eCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 4568885 3457777777765 9999988 555666777777675333322111111 013569999984322
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+....+.|++||.+++....
T Consensus 246 ---------~~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 246 ---------AYFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp ---------GGHHHHHHTEEEEEEEEECCCT
T ss_pred ---------HHHHHHHHHhccCCEEEEEEec
Confidence 1356778899999999876533
No 369
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=79.85 E-value=4.8 Score=39.00 Aligned_cols=88 Identities=19% Similarity=0.194 Sum_probs=56.6
Q ss_pred cEEEEEc--CCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC-----CCCCceeEEEEccchh
Q 043503 278 RIGLDIG--GGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP-----FFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIG--cGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L~ 349 (430)
.+||=+| +|.|.++..+++. |++|+++ +.++.-.+.+++-|.-.++... +.+. ...+.+|+|+..-.
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~vi~~~-~~~~~~~~~~~~~g~Dvv~d~~g-- 226 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYGLRVITT--ASRNETIEWTKKMGADIVLNHK-ESLLNQFKTQGIELVDYVFCTFN-- 226 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEE--CCSHHHHHHHHHHTCSEEECTT-SCHHHHHHHHTCCCEEEEEESSC--
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCEEEEE--eCCHHHHHHHHhcCCcEEEECC-ccHHHHHHHhCCCCccEEEECCC--
Confidence 3458774 3446777777765 9999988 5667777788777753333221 1110 12356999998421
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEe
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
-...+....++|+|||.++..
T Consensus 227 -------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 227 -------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEES
T ss_pred -------chHHHHHHHHHhccCCEEEEE
Confidence 234577888999999999753
No 370
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=79.69 E-value=6.4 Score=38.60 Aligned_cols=89 Identities=19% Similarity=0.116 Sum_probs=57.9
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC-----CCCCceeEEEEccchh
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP-----FFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L~ 349 (430)
.+||=+|+ |.|.++..+++. |++|+++. ++.-.+.+++-|.-.++......+. ..++.+|+|+-.-.-
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~- 241 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSGYIPIATC---SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN- 241 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE---CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS-
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEe---CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc-
Confidence 45688887 378888888876 99988773 4666778887776444432211111 123459999974221
Q ss_pred hcCCchhHHHHHHHHHHhc-cCCcEEEEee
Q 043503 350 NWIPDSMLEFTLYDIYRLL-RPGGIFWLDR 378 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvL-rPGG~lvl~~ 378 (430)
...+....+.| |+||.+++..
T Consensus 242 --------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 242 --------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp --------HHHHHHHHHHSCTTCEEEEESS
T ss_pred --------hHHHHHHHHHhhcCCCEEEEEe
Confidence 23567778888 6999998754
No 371
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=79.61 E-value=3.7 Score=39.36 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=55.7
Q ss_pred EEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEc-cc--ccC-CCCCCceeEEEEccchhhc
Q 043503 279 IGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHIS-VS--QRL-PFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 279 ~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~-d~--~~l-pf~d~sfDlV~~~~~L~~~ 351 (430)
+||-+|+ |.|.++..+++. |++|++++ .++.-.+.+++-|.-.++.. +. +.. ....+.+|+|+..-.-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~--~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~--- 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEAST--GKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG--- 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEE--SCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT---
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEE--CCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH---
Confidence 3688986 667888888776 88988884 34555677776665222221 11 101 1223479999874221
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
..+....+.|++||.+++....
T Consensus 227 -------~~~~~~~~~l~~~G~~v~~G~~ 248 (328)
T 1xa0_A 227 -------RTLATVLSRMRYGGAVAVSGLT 248 (328)
T ss_dssp -------TTHHHHHHTEEEEEEEEECSCC
T ss_pred -------HHHHHHHHhhccCCEEEEEeec
Confidence 1366788899999999886543
No 372
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=79.40 E-value=5.1 Score=40.56 Aligned_cols=89 Identities=16% Similarity=0.043 Sum_probs=58.8
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC---------------------
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP--------------------- 333 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp--------------------- 333 (430)
.+||=+|+ |.|.++..+++. |++|++++ .++.-++.+++-|.-.++......+.
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~Ga~vi~~~--~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~ 307 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGGANPICVV--SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIR 307 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCeEEEEE--CCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHH
Confidence 45688886 557788888776 99988884 46777788877776433332111110
Q ss_pred --CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 334 --FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 334 --f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.....+|+|+..-.- ..+....++|+|||.+++..
T Consensus 308 ~~t~g~g~Dvvid~~G~----------~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 308 ELTGGEDIDIVFEHPGR----------ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHTSCCEEEEEECSCH----------HHHHHHHHHEEEEEEEEESC
T ss_pred HHhCCCCCcEEEEcCCc----------hhHHHHHHHhhCCcEEEEEe
Confidence 112579999874211 35778889999999998754
No 373
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=79.08 E-value=5.2 Score=38.42 Aligned_cols=90 Identities=18% Similarity=0.031 Sum_probs=55.9
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccC----C--CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRL----P--FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~l----p--f~d~sfDlV~~~~~L 348 (430)
++||-.|+ |.|..+..++.. |++|+++ +.++...+.+++.|.-..+......+ . .....+|+|+.+-.-
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~--~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHLGATVIGT--VSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence 45698984 677777777665 8999988 44565566666655422222111110 0 112469999974321
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
..+....++|+|||.+++...
T Consensus 225 ----------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 225 ----------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp ----------TTHHHHHHTEEEEEEEEECCC
T ss_pred ----------HHHHHHHHhhccCCEEEEEec
Confidence 236678899999999987653
No 374
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=78.50 E-value=5.2 Score=38.32 Aligned_cols=90 Identities=12% Similarity=0.114 Sum_probs=57.0
Q ss_pred EEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEc-cc--ccC-CCCCCceeEEEEccchhhc
Q 043503 279 IGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHIS-VS--QRL-PFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 279 ~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~-d~--~~l-pf~d~sfDlV~~~~~L~~~ 351 (430)
+||-+|+ |.|.++..+++. |++|++++. ++.-.+.+++-|.-.++.. +. +.. ....+.+|+|+..-.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~--~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g---- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTG--NREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG---- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEES--SSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC----
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc----
Confidence 3688986 567788888776 889888844 3445666766665333321 11 111 122356999987421
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
. ..+.+..+.|++||.+++....
T Consensus 227 --~----~~~~~~~~~l~~~G~iv~~G~~ 249 (330)
T 1tt7_A 227 --G----KQLASLLSKIQYGGSVAVSGLT 249 (330)
T ss_dssp --T----HHHHHHHTTEEEEEEEEECCCS
T ss_pred --H----HHHHHHHHhhcCCCEEEEEecC
Confidence 1 2477888999999999876543
No 375
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=78.36 E-value=2.1 Score=40.64 Aligned_cols=89 Identities=13% Similarity=0.004 Sum_probs=54.7
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEccc-ccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVS-QRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~-~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
.+||-+|+ |.|..+..+++. |++|++++ .++...+.+++-|.-.++.... ..+.-.-+.+|+|+. -.-
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~--~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~----- 198 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAA--SRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG----- 198 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEE--SSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-----
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-----
Confidence 45699997 557777777765 89999884 4455566776666533322111 111000056999987 322
Q ss_pred chhHHHHHHHHHHhccCCcEEEEeec
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
..+....+.|+|||.++....
T Consensus 199 -----~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 199 -----KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp -----TTHHHHHTTEEEEEEEEEC--
T ss_pred -----HHHHHHHHhhccCCEEEEEeC
Confidence 135678899999999987543
No 376
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=78.08 E-value=4.9 Score=39.26 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=54.5
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCCh---hHHHHHHhcCCeeEEEcccccCCCC------CCceeEEEEcc
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDG---PFNSFIASRGLISMHISVSQRLPFF------ENTLDIVHSMH 346 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~---~~le~a~~rg~i~~~~~d~~~lpf~------d~sfDlV~~~~ 346 (430)
.+||-+|+|. |.++..+++. |++|++++. ++ .-.+.+++-|.-.+ | .. .+. .+.+|+|+..-
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~--~~~~~~~~~~~~~~ga~~v---~-~~-~~~~~~~~~~~~~d~vid~~ 254 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYGLEVWMANR--REPTEVEQTVIEETKTNYY---N-SS-NGYDKLKDSVGKFDVIIDAT 254 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCEEEEEES--SCCCHHHHHHHHHHTCEEE---E-CT-TCSHHHHHHHCCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeC--CccchHHHHHHHHhCCcee---c-hH-HHHHHHHHhCCCCCEEEECC
Confidence 4568898732 5566666654 899998854 34 44566766665322 2 22 211 14699999843
Q ss_pred chhhcCCchhHHHHH-HHHHHhccCCcEEEEeecc
Q 043503 347 VLSNWIPDSMLEFTL-YDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L-~ei~RvLrPGG~lvl~~f~ 380 (430)
.. +. .+ ....+.|++||.+++....
T Consensus 255 g~----~~-----~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 255 GA----DV-----NILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp CC----CT-----HHHHHHGGGEEEEEEEEECSCC
T ss_pred CC----hH-----HHHHHHHHHHhcCCEEEEEecC
Confidence 22 11 35 7888999999999876543
No 377
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=77.78 E-value=5.7 Score=38.59 Aligned_cols=90 Identities=8% Similarity=-0.033 Sum_probs=54.9
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CC-EEEEEecCCChhHHHHHHh-cCCeeEEEcccccCC-----CCCCceeEEEEccc
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NV-TIITTSLNLDGPFNSFIAS-RGLISMHISVSQRLP-----FFENTLDIVHSMHV 347 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~-rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~ 347 (430)
++||-.|+ |.|..+..++.. |+ +|+++ +.++...+.+++ -|.-..+......+. ...+.+|+|+.+-.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~--~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G 239 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGI--CGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVG 239 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEE--eCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEECCC
Confidence 45688887 556666666654 88 99988 445555666665 454222221111110 11226999987432
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
- ..+....++|++||.+++...
T Consensus 240 ~----------~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 240 G----------NISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp H----------HHHHHHHHTEEEEEEEEECCC
T ss_pred H----------HHHHHHHHHhccCcEEEEECC
Confidence 1 357788899999999987654
No 378
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=77.74 E-value=5.6 Score=38.08 Aligned_cols=88 Identities=18% Similarity=0.139 Sum_probs=55.1
Q ss_pred cEEEEEc--CCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEccccc-CCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIG--GGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQR-LPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIG--cGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~-lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
.+||=+| +|.|.++..+++. |++|++++ +..-.+.+++-|.-.++...... +.-.-..+|+|+..-.-
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~---~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~----- 225 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKGTTVITTA---SKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG----- 225 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH-----
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe---ccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc-----
Confidence 3458776 4557888888776 99988873 34446777777764433322111 11111469999874221
Q ss_pred chhHHHHHHHHHHhccCCcEEEEee
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
..+....++|+|||.++...
T Consensus 226 -----~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 226 -----DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp -----HHHHHHGGGEEEEEEEEECC
T ss_pred -----HHHHHHHHhccCCCEEEEeC
Confidence 12378889999999998753
No 379
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.70 E-value=16 Score=33.77 Aligned_cols=84 Identities=21% Similarity=0.172 Sum_probs=51.9
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
|.=||+|. | .++..+.+.|.+|+.+ |.++...+.+.+.|...-...+.... ...|+|+.. ++....
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~D~vi~a------v~~~~~ 70 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGV--SRQQSTCEKAVERQLVDEAGQDLSLL----QTAKIIFLC------TPIQLI 70 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTSCSEEESCGGGG----TTCSEEEEC------SCHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEE--ECCHHHHHHHHhCCCCccccCCHHHh----CCCCEEEEE------CCHHHH
Confidence 35578775 2 4556666668888887 66666666666656532122233222 357999884 233236
Q ss_pred HHHHHHHHHhccCCcEEE
Q 043503 358 EFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 358 ~~~L~ei~RvLrPGG~lv 375 (430)
..++.++...++||..++
T Consensus 71 ~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHhhCCCCCEEE
Confidence 678888888888887553
No 380
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=77.60 E-value=11 Score=37.97 Aligned_cols=86 Identities=13% Similarity=0.124 Sum_probs=56.1
Q ss_pred EEEEcCCccHHHHHHH----HcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhhc
Q 043503 280 GLDIGGGTGTFAARMR----ERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 280 VLDIGcGtG~~a~~La----~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~~ 351 (430)
|+=+|+| .++..++ +.|..|+.+ |.++...+.+++.|. .++.+|..+.. ..-...|+|++.
T Consensus 7 viIiG~G--r~G~~va~~L~~~g~~vvvI--d~d~~~v~~~~~~g~-~vi~GDat~~~~L~~agi~~A~~viv~------ 75 (413)
T 3l9w_A 7 VIIAGFG--RFGQITGRLLLSSGVKMVVL--DHDPDHIETLRKFGM-KVFYGDATRMDLLESAGAAKAEVLINA------ 75 (413)
T ss_dssp EEEECCS--HHHHHHHHHHHHTTCCEEEE--ECCHHHHHHHHHTTC-CCEESCTTCHHHHHHTTTTTCSEEEEC------
T ss_pred EEEECCC--HHHHHHHHHHHHCCCCEEEE--ECCHHHHHHHHhCCC-eEEEcCCCCHHHHHhcCCCccCEEEEC------
Confidence 3666664 4444444 448899988 555666777776664 67778876532 223568988884
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEE
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
+++......+....|-+.|...++.
T Consensus 76 ~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 76 IDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp CSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCChHHHHHHHHHHHHhCCCCeEEE
Confidence 2333356677788888999977766
No 381
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=76.21 E-value=24 Score=28.38 Aligned_cols=106 Identities=11% Similarity=0.061 Sum_probs=56.3
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhhcC
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~~~ 352 (430)
.|+=+|+|. | .++..+.+.|.+|+.+| .++...+.+.+...+.++.+|..... ..-..+|+|+..-
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d--~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~------ 77 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLID--IDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT------ 77 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC------
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEE--CCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee------
Confidence 346677754 2 23444455588888884 44554554444322345556543211 1124689988852
Q ss_pred CchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCE
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFK 400 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk 400 (430)
++......+.++.+.+.++- ++.. ..+. ...+.+++.|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~-ii~~---~~~~----~~~~~l~~~g~~ 117 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGINK-TIAR---ISEI----EYKDVFERLGVD 117 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCCC-EEEE---CSST----THHHHHHHTTCS
T ss_pred CCchHHHHHHHHHHHcCCCE-EEEE---ecCH----hHHHHHHHcCCC
Confidence 22223445666777788864 4432 1221 234567788875
No 382
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=76.15 E-value=2.9 Score=40.63 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=33.9
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASR 319 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r 319 (430)
.+|||.-||+|+.+....+.|.+.+++ |+++...+.+++|
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~gr~~ig~--e~~~~~~~~~~~r 293 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERESRKWISF--EMKPEYVAASAFR 293 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCEEEEE--ESCHHHHHHHHGG
T ss_pred CEEEECCCCCCHHHHHHHHcCCCEEEE--eCCHHHHHHHHHH
Confidence 457999999999999999889999998 5557777777766
No 383
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=75.88 E-value=2.9 Score=40.81 Aligned_cols=82 Identities=10% Similarity=0.044 Sum_probs=48.8
Q ss_pred eeEE-Eccccc-CC-CCCCceeEEEEccchhh----cC-Cc---hhHHHHHHHHHHhccCCcEEEEeeccccC----cCc
Q 043503 322 ISMH-ISVSQR-LP-FFENTLDIVHSMHVLSN----WI-PD---SMLEFTLYDIYRLLRPGGIFWLDRFFCFG----SQL 386 (430)
Q Consensus 322 i~~~-~~d~~~-lp-f~d~sfDlV~~~~~L~~----~~-~d---~~l~~~L~ei~RvLrPGG~lvl~~f~~~~----~~~ 386 (430)
..++ ++|+.. +. +++++||+|++...... |. .+ ..+...+.++.|+|+|||.+++..-.... ...
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~~~ 118 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGD 118 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccccccccccc
Confidence 5566 777633 22 45789999999654311 11 01 13567788999999999999885321111 011
Q ss_pred HHHHHHHHHHcC-CEEEE
Q 043503 387 NETYVPMLDRIG-FKKLR 403 (430)
Q Consensus 387 ~~~~~~ll~~~G-fk~l~ 403 (430)
...+...+...| |....
T Consensus 119 l~~l~~~i~~~G~~~~~~ 136 (319)
T 1eg2_A 119 LISIISHMRQNSKMLLAN 136 (319)
T ss_dssp HHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHhCcccceeEE
Confidence 244555566667 87554
No 384
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=74.73 E-value=12 Score=35.20 Aligned_cols=71 Identities=18% Similarity=0.172 Sum_probs=48.2
Q ss_pred cEEEEEcCCcc---HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCC-eeEEEcccccCC-----CCCCceeEEEEccch
Q 043503 278 RIGLDIGGGTG---TFAARMRERNVTIITTSLNLDGPFNSFIASRGL-ISMHISVSQRLP-----FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGcGtG---~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~-i~~~~~d~~~lp-----f~d~sfDlV~~~~~L 348 (430)
+++|=-|++.| ..+..+++.|++|+.+|.+..+...+.+.+.|. ..++..|..+-. +..+..|+++.+-..
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi 89 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGI 89 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCCC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCCC
Confidence 45677787777 467777888999999987765555666665544 666666654321 345779999986443
No 385
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=74.44 E-value=13 Score=33.26 Aligned_cols=86 Identities=13% Similarity=0.021 Sum_probs=50.8
Q ss_pred EEEcCCccHHHHHHH----HcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhhcC
Q 043503 281 LDIGGGTGTFAARMR----ERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 281 LDIGcGtG~~a~~La----~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~~~ 352 (430)
+=+|+ |.++..++ +.|..|+.+| .++...+...+...+.++.+|..... ..-..+|+|++. .
T Consensus 4 iIiG~--G~~G~~la~~L~~~g~~v~vid--~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~------~ 73 (218)
T 3l4b_C 4 IIIGG--ETTAYYLARSMLSRKYGVVIIN--KDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVIL------T 73 (218)
T ss_dssp EEECC--HHHHHHHHHHHHHTTCCEEEEE--SCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC------C
T ss_pred EEECC--CHHHHHHHHHHHhCCCeEEEEE--CCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe------c
Confidence 44554 65555554 4488999884 44555554443323467788765422 112468998884 2
Q ss_pred CchhHHHHHHHHHHhccCCcEEEE
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
++......+..+.+-+.|...++.
T Consensus 74 ~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 74 PRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp SCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCeEEE
Confidence 333355667777777777777654
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=73.28 E-value=10 Score=38.14 Aligned_cols=89 Identities=16% Similarity=0.058 Sum_probs=56.9
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC---------------------
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP--------------------- 333 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp--------------------- 333 (430)
++||=+|+ |.|..++.+++. |++|++++ .++.-++.+++-|.-.++......+.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~--~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVV--SSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV 299 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence 45688886 456777777766 99988884 46777777777665333322111100
Q ss_pred --CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 334 --FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 334 --f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.....+|+|+..-.. ..+....+.|++||.+++..
T Consensus 300 ~~~~g~g~Dvvid~~G~----------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 300 VEKAGREPDIVFEHTGR----------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHSSCCSEEEECSCH----------HHHHHHHHHSCTTCEEEESC
T ss_pred HHHhCCCceEEEECCCc----------hHHHHHHHHHhcCCEEEEEe
Confidence 013469999874221 24677888999999998754
No 387
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=73.25 E-value=4.5 Score=39.16 Aligned_cols=90 Identities=16% Similarity=0.130 Sum_probs=53.2
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CC-EEEEEecCCChhHHHHHHhcCCeeEEEcccccCC-----CCCCceeEEEEccchh
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NV-TIITTSLNLDGPFNSFIASRGLISMHISVSQRLP-----FFENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L~ 349 (430)
.+||-+|+|. |.++..+++. |+ +|+++ +.++.-.+.+++- .-.++....+.+. ...+.+|+|+..-..
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~--~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASGAGPILVS--DPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGN- 241 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCSEEEE--CSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCC-
Confidence 3458888753 6777777765 88 89988 5555555555432 1111111111110 002469999874221
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
...+....+.|++||.+++...
T Consensus 242 --------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 242 --------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp --------HHHHHHHHHHEEEEEEEEECCC
T ss_pred --------HHHHHHHHHHHhcCCEEEEEec
Confidence 2357788899999999987543
No 388
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=73.07 E-value=4.4 Score=39.28 Aligned_cols=82 Identities=6% Similarity=-0.042 Sum_probs=50.5
Q ss_pred ccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccchhhcCCchhHHH
Q 043503 287 TGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVLSNWIPDSMLEF 359 (430)
Q Consensus 287 tG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L~~~~~d~~l~~ 359 (430)
.|.++..+++. |++|+++ +.++.-.+.+++-|.-.++......+. .....+|+|+..-.- .
T Consensus 177 vG~~a~qla~~~Ga~Vi~~--~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~----------~ 244 (349)
T 3pi7_A 177 LCKLIIGLAKEEGFRPIVT--VRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG----------P 244 (349)
T ss_dssp HHHHHHHHHHHHTCEEEEE--ESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH----------H
T ss_pred HHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC----------h
Confidence 45666666665 9999988 445666777777675333332211111 011369999874322 1
Q ss_pred HHHHHHHhccCCcEEEEeecc
Q 043503 360 TLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 360 ~L~ei~RvLrPGG~lvl~~f~ 380 (430)
.+....+.|++||.+++....
T Consensus 245 ~~~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 245 LASAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp HHHHHHHHSCTTCEEEECCCS
T ss_pred hHHHHHhhhcCCCEEEEEecc
Confidence 246778999999999886543
No 389
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=72.70 E-value=25 Score=32.57 Aligned_cols=86 Identities=19% Similarity=0.182 Sum_probs=52.0
Q ss_pred EEEEcCCc-c-HHHHHHHHcCC--EEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCC-ceeEEEEccchhhcCCc
Q 043503 280 GLDIGGGT-G-TFAARMRERNV--TIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFEN-TLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~--~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~-sfDlV~~~~~L~~~~~d 354 (430)
|.=||+|. | .++..+++.|. +|+++ |.++...+.+.+.|.......+.... -. ..|+|+.. ++.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~--d~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~aDvVila------vp~ 72 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGY--DINPESISKAVDLGIIDEGTTSIAKV---EDFSPDFVMLS------SPV 72 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEE--CSCHHHHHHHHHTTSCSEEESCGGGG---GGTCCSEEEEC------SCH
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEE--eCCHHHHHHHHHCCCcccccCCHHHH---hcCCCCEEEEc------CCH
Confidence 45678775 2 45555666677 88887 66666666666667532122222211 12 57999884 233
Q ss_pred hhHHHHHHHHHHhccCCcEEEE
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl 376 (430)
.....++.++...+++|..++.
T Consensus 73 ~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 73 RTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHHhhCCCCcEEEE
Confidence 2356778888888998875544
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=72.52 E-value=41 Score=28.82 Aligned_cols=107 Identities=13% Similarity=-0.005 Sum_probs=61.4
Q ss_pred EEEEcCCc-c-HHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----C-CCCceeEEEEccchhhc
Q 043503 280 GLDIGGGT-G-TFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----F-FENTLDIVHSMHVLSNW 351 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f-~d~sfDlV~~~~~L~~~ 351 (430)
|+=+|+|. | .++..|.+. |.+|+++| .++...+.+.+.|. .++.+|..+.. . .-..+|+|+..-
T Consensus 42 v~IiG~G~~G~~~a~~L~~~~g~~V~vid--~~~~~~~~~~~~g~-~~~~gd~~~~~~l~~~~~~~~ad~vi~~~----- 113 (183)
T 3c85_A 42 VLILGMGRIGTGAYDELRARYGKISLGIE--IREEAAQQHRSEGR-NVISGDATDPDFWERILDTGHVKLVLLAM----- 113 (183)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCSCEEEEE--SCHHHHHHHHHTTC-CEEECCTTCHHHHHTBCSCCCCCEEEECC-----
T ss_pred EEEECCCHHHHHHHHHHHhccCCeEEEEE--CCHHHHHHHHHCCC-CEEEcCCCCHHHHHhccCCCCCCEEEEeC-----
Confidence 47778764 3 345556666 88999884 45655666666564 45566543311 1 234689988842
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEE
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l 402 (430)
++......+....+.+.|++.++... .+ ....+.+.+.|-..+
T Consensus 114 -~~~~~~~~~~~~~~~~~~~~~ii~~~---~~----~~~~~~l~~~G~~~v 156 (183)
T 3c85_A 114 -PHHQGNQTALEQLQRRNYKGQIAAIA---EY----PDQLEGLLESGVDAA 156 (183)
T ss_dssp -SSHHHHHHHHHHHHHTTCCSEEEEEE---SS----HHHHHHHHHHTCSEE
T ss_pred -CChHHHHHHHHHHHHHCCCCEEEEEE---CC----HHHHHHHHHcCCCEE
Confidence 22123334455677778888877642 11 233446677776644
No 391
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=72.48 E-value=6.9 Score=38.33 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=55.1
Q ss_pred cEEEEEc--CCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC---CCCCceeEEEEccchhhc
Q 043503 278 RIGLDIG--GGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP---FFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 278 r~VLDIG--cGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp---f~d~sfDlV~~~~~L~~~ 351 (430)
.+||=+| .|.|.++..+++. |++|++++ ++.-.+.+++-|.-.++......+. .....+|+|+..-.-
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~---~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~--- 258 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWDAHVTAVC---SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG--- 258 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE---CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCT---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEe---ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCC---
Confidence 4568888 4567788877766 89988874 3455677766665333322111110 011469999874221
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
....+....+.|++||.+++..
T Consensus 259 -----~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 259 -----STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp -----THHHHGGGGBCSSSCCEEEESC
T ss_pred -----hhhhhHHHHHhhcCCcEEEEeC
Confidence 1124567778999999998754
No 392
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=72.28 E-value=20 Score=34.23 Aligned_cols=89 Identities=11% Similarity=0.026 Sum_probs=55.1
Q ss_pred EEEEEcCCcc-HHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEccccc----CC--CCCCceeEEEEccchh
Q 043503 279 IGLDIGGGTG-TFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQR----LP--FFENTLDIVHSMHVLS 349 (430)
Q Consensus 279 ~VLDIGcGtG-~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~----lp--f~d~sfDlV~~~~~L~ 349 (430)
+||=+|+|.+ .++..++.+ +.+|+++ +.++.-++.+++.|.-.++.....+ +. .....+|.++....
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~--~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~-- 241 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVFGAKVIAV--DINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV-- 241 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEE--ESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS--
T ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEE--ECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc--
Confidence 4577898864 455555543 7899988 5567667888877764333321111 10 12335677665321
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
-...+....+.|++||.+++..
T Consensus 242 -------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 242 -------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp -------CHHHHHHHHHTEEEEEEEEECC
T ss_pred -------CcchhheeheeecCCceEEEEe
Confidence 1246778889999999988754
No 393
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=71.93 E-value=15 Score=35.49 Aligned_cols=86 Identities=16% Similarity=0.109 Sum_probs=56.1
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC------CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP------FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp------f~d~sfDlV~~~~~L 348 (430)
.+||-+|+ |.|.++..+++. |++|+++ . ++.-++.+++.|.-. +. ....+. .....+|+|+..-.
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~--~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g- 225 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-A--RGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLG- 225 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-E--CHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSC-
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-e--CHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCC-
Confidence 45699983 557788888776 8998877 3 355577777777633 22 211111 12347999987422
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
. ..+....+.|+|||.+++..
T Consensus 226 -----~----~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 226 -----G----PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp -----T----HHHHHHHHHEEEEEEEEESC
T ss_pred -----c----HHHHHHHHHHhcCCeEEEEc
Confidence 1 25778888999999998753
No 394
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=66.76 E-value=27 Score=29.20 Aligned_cols=105 Identities=6% Similarity=-0.145 Sum_probs=58.2
Q ss_pred EEEEcCCccHHHHHHH----HcCCEEEEEecCCChhHHHHHH-h-cCCeeEEEcccccCC----CCCCceeEEEEccchh
Q 043503 280 GLDIGGGTGTFAARMR----ERNVTIITTSLNLDGPFNSFIA-S-RGLISMHISVSQRLP----FFENTLDIVHSMHVLS 349 (430)
Q Consensus 280 VLDIGcGtG~~a~~La----~~g~~Vv~vdiD~s~~~le~a~-~-rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~ 349 (430)
++=+|+ |.++..++ +.|..|+.+|.+. +...+... . ...+.++.+|..+.. ..-...|+|++.
T Consensus 6 vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~-~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~---- 78 (153)
T 1id1_A 6 FIVCGH--SILAINTILQLNQRGQNVTVISNLP-EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL---- 78 (153)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEECCC-HHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC----
T ss_pred EEEECC--CHHHHHHHHHHHHCCCCEEEEECCC-hHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe----
Confidence 366665 55555544 4488999885543 22222222 1 222577788764321 112468988884
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCE
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFK 400 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk 400 (430)
.++......+....+.+.|...++.. ..+ ....+.+++.|..
T Consensus 79 --~~~d~~n~~~~~~a~~~~~~~~ii~~---~~~----~~~~~~l~~~G~~ 120 (153)
T 1id1_A 79 --SDNDADNAFVVLSAKDMSSDVKTVLA---VSD----SKNLNKIKMVHPD 120 (153)
T ss_dssp --SSCHHHHHHHHHHHHHHTSSSCEEEE---CSS----GGGHHHHHTTCCS
T ss_pred --cCChHHHHHHHHHHHHHCCCCEEEEE---ECC----HHHHHHHHHcCCC
Confidence 22223556777788888887777653 111 2233456777765
No 395
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=66.27 E-value=25 Score=33.94 Aligned_cols=90 Identities=11% Similarity=0.087 Sum_probs=53.1
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCCh---hHHHHHHhcCCeeEEEcc---cccCC-C-CC-CceeEEEEc
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDG---PFNSFIASRGLISMHISV---SQRLP-F-FE-NTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~---~~le~a~~rg~i~~~~~d---~~~lp-f-~d-~sfDlV~~~ 345 (430)
.+||=+|+ |.|.++..+++. |++++++. +..+ ...+.+++-|.-.++... .+.+. . .. +.+|+|+-.
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~-~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~ 247 (357)
T 1zsy_A 169 DSVIQNASNSGVGQAVIQIAAALGLRTINVV-RDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNC 247 (357)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTCEEEEEE-CCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEES
T ss_pred CEEEEeCCcCHHHHHHHHHHHHcCCEEEEEe-cCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEEC
Confidence 45688885 568888888876 88776652 3222 234666666653333221 11111 1 11 148999874
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
-.- . ...+..++|+|||.+++..
T Consensus 248 ~g~---------~-~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 248 VGG---------K-SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SCH---------H-HHHHHHTTSCTTCEEEECC
T ss_pred CCc---------H-HHHHHHHhhCCCCEEEEEe
Confidence 221 1 1245789999999998764
No 396
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=65.70 E-value=10 Score=38.13 Aligned_cols=36 Identities=14% Similarity=-0.002 Sum_probs=27.0
Q ss_pred CccEEEEEcCCccHHHHHHH-Hc-C--CEEEEEecCCChhHH
Q 043503 276 TIRIGLDIGGGTGTFAARMR-ER-N--VTIITTSLNLDGPFN 313 (430)
Q Consensus 276 ~ir~VLDIGcGtG~~a~~La-~~-g--~~Vv~vdiD~s~~~l 313 (430)
...+++|+|++.|.++..++ .. + .+|+++ ++.+...
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~af--EP~p~~~ 265 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMI--EPDRINL 265 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEE--CCCHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEE--cCCHHHH
Confidence 34568999999999999888 33 2 689988 5555443
No 397
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=65.33 E-value=5.6 Score=38.80 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=53.0
Q ss_pred cEEEEEcCC-ccHHHHHHHHc-CCEEEEEecCCChhHHHHHH-hcCCeeEEEcc-cccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGG-TGTFAARMRER-NVTIITTSLNLDGPFNSFIA-SRGLISMHISV-SQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcG-tG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~-~rg~i~~~~~d-~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
.+||=+|+| .|.++..+++. |++|++++ .++.-.+.++ +-|.-.++... .+.+.-..+.+|+|+..-.- +
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~----~ 255 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMGHHVTVIS--SSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV----H 255 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEE--SSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS----C
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEe--CChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC----h
Confidence 345777865 36677777765 99998884 4455566666 44542232221 11110001369999874322 1
Q ss_pred chhHHHHHHHHHHhccCCcEEEEeec
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
. .+....++|+|||.+++...
T Consensus 256 ~-----~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 256 H-----ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp C-----CSHHHHTTEEEEEEEEECSC
T ss_pred H-----HHHHHHHHhccCCEEEEeCC
Confidence 1 24566789999999987653
No 398
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=65.30 E-value=5.6 Score=38.73 Aligned_cols=40 Identities=18% Similarity=0.069 Sum_probs=32.7
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCCh---hHHHHHHhc
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDG---PFNSFIASR 319 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~---~~le~a~~r 319 (430)
.+|||.-||+|+.+....+.|.+.+++++ ++ ...+.+.+|
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~~r~~ig~e~--~~~~~~~~~~~~~R 286 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQEGRNSICTDA--APVFKEYYQKQLTF 286 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHHTCEEEEEES--STHHHHHHHHHHHH
T ss_pred CEEEecCCCCCHHHHHHHHcCCcEEEEEC--CccHHHHHHHHHHH
Confidence 45799999999999999888999999955 46 666777666
No 399
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=64.69 E-value=7.1 Score=38.23 Aligned_cols=90 Identities=17% Similarity=0.139 Sum_probs=52.0
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHH-hcCCeeEEEcc-cccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIA-SRGLISMHISV-SQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~-~rg~i~~~~~d-~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
.+||=+|+|. |.+++.+++. |++|+++ +.++...+.+. +-|.-.++... .+.+.-..+.+|+|+..-.. +
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~--~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~----~ 262 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVI--STSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA----V 262 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--ESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS----C
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc----H
Confidence 3457788653 6667777665 8999888 44555566665 44543332211 11111001369999984322 1
Q ss_pred chhHHHHHHHHHHhccCCcEEEEee
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
. .+....++|++||.++...
T Consensus 263 ~-----~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 263 H-----PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp C-----CSHHHHHHEEEEEEEEECC
T ss_pred H-----HHHHHHHHHhcCCEEEEEc
Confidence 1 2346678899999988754
No 400
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=63.62 E-value=67 Score=30.63 Aligned_cols=110 Identities=15% Similarity=0.068 Sum_probs=62.5
Q ss_pred EEEEcCCc-c-HHHHHHHHcC-CEEEEEecCCC-----hhHHHHHHhcCCeeEEEc-ccccCCCCCCceeEEEEccchhh
Q 043503 280 GLDIGGGT-G-TFAARMRERN-VTIITTSLNLD-----GPFNSFIASRGLISMHIS-VSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g-~~Vv~vdiD~s-----~~~le~a~~rg~i~~~~~-d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
|-=||+|. | .++..+++.| .+|++.|.+.. +...+.+.+.|. .. +....- ...|+|+..
T Consensus 27 IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~----~~~s~~e~~---~~aDvVi~a----- 94 (317)
T 4ezb_A 27 IAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV----EPLDDVAGI---ACADVVLSL----- 94 (317)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC----EEESSGGGG---GGCSEEEEC-----
T ss_pred EEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC----CCCCHHHHH---hcCCEEEEe-----
Confidence 46678774 2 4566666678 89998855431 033444445564 22 222211 346888884
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEE
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~ 404 (430)
++.......+.++...++||..++-.. .......+.+.+.+.+.|...+.-
T Consensus 95 -vp~~~~~~~~~~i~~~l~~~~ivv~~s--t~~p~~~~~~~~~l~~~g~~~~d~ 145 (317)
T 4ezb_A 95 -VVGAATKAVAASAAPHLSDEAVFIDLN--SVGPDTKALAAGAIATGKGSFVEG 145 (317)
T ss_dssp -CCGGGHHHHHHHHGGGCCTTCEEEECC--SCCHHHHHHHHHHHHTSSCEEEEE
T ss_pred -cCCHHHHHHHHHHHhhcCCCCEEEECC--CCCHHHHHHHHHHHHHcCCeEEec
Confidence 222234556688888899887655422 112223455667777778776543
No 401
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=63.37 E-value=3.5 Score=35.51 Aligned_cols=61 Identities=13% Similarity=0.124 Sum_probs=40.3
Q ss_pred CCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 333 PFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 333 pf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
.+++++||.|+-..--.. ........++..+.+.|||||.|.. + ......-+--+||.+..
T Consensus 54 sLp~stYD~V~~lt~~~~-~~~~l~r~li~~l~~aLkpgG~L~g---l------~~~~~~EailaGfvv~~ 114 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQ-TDIKFPKKLISVLADSLKPNGSLIG---L------SDIYKVDALINGFEIIN 114 (136)
T ss_dssp CCCSSSCCSEEEECCCSS-CSCCCCHHHHHHHHTTCCTTCCEEC---C------CHHHHHHHHHHTEEEEC
T ss_pred cCCcccccEEEEecCCcc-chhhcCHHHHHHHHHHhCCCCEEEe---c------CcchhhHHHhhccEecc
Confidence 467899999998543321 1011237899999999999999875 1 12333445567888664
No 402
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=61.73 E-value=11 Score=36.21 Aligned_cols=65 Identities=12% Similarity=0.009 Sum_probs=45.1
Q ss_pred EEEEEcCCccHHHHHHHHcCCEE---EEEecCCChhHHHHHHhc-CCeeEEEcccccCCC---C-CCceeEEEEc
Q 043503 279 IGLDIGGGTGTFAARMRERNVTI---ITTSLNLDGPFNSFIASR-GLISMHISVSQRLPF---F-ENTLDIVHSM 345 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~V---v~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf---~-d~sfDlV~~~ 345 (430)
+++|+-||.|.+...+.+.|.++ .++ |+++...+.-+.+ +...++.+|...+.. + ...+|+++..
T Consensus 18 ~vidLFaG~GG~~~g~~~aG~~~~~v~a~--E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 18 RVLSLFDGIATGLLVLKDLGIQVDRYIAS--EVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp EEEEETCTTTHHHHHHHHTTBCEEEEEEE--CCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred EEEEeCcCccHHHHHHHHCCCccceEEEE--ECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 57999999999999999888766 455 6656555544444 223567788776641 1 1368999984
No 403
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=60.90 E-value=45 Score=31.40 Aligned_cols=111 Identities=13% Similarity=0.188 Sum_probs=63.5
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc-h
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD-S 355 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d-~ 355 (430)
+|-=||+|. | .++..+++.|.+|++. |.++...+.+.+.|... ...+.... -...|+|+.. +++ .
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~--dr~~~~~~~~~~~g~~~-~~~~~~e~---~~~aDvvi~~------vp~~~ 76 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGA--DLNPQACANLLAEGACG-AAASAREF---AGVVDALVIL------VVNAA 76 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTCSE-EESSSTTT---TTTCSEEEEC------CSSHH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEE--ECCHHHHHHHHHcCCcc-ccCCHHHH---HhcCCEEEEE------CCCHH
Confidence 346677775 2 4566666779999988 66676667666666532 12232222 1346999884 222 1
Q ss_pred hHHHHH---HHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 356 MLEFTL---YDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 356 ~l~~~L---~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
..+.++ .++...++||..++-.. .......+.+.+.+.+.|...+.
T Consensus 77 ~~~~v~~~~~~l~~~l~~g~ivv~~s--t~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 77 QVRQVLFGEDGVAHLMKPGSAVMVSS--TISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp HHHHHHC--CCCGGGSCTTCEEEECS--CCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHhChhhHHhhCCCCCEEEecC--CCCHHHHHHHHHHHHHcCCeEEe
Confidence 244455 56667788887665321 11122334556666777766554
No 404
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=59.85 E-value=23 Score=35.10 Aligned_cols=108 Identities=16% Similarity=0.107 Sum_probs=64.7
Q ss_pred cEEEEEcCCccHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 278 RIGLDIGGGTGTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
..||+++-+.|.++..+.. +.++..+ ..+.+.....+.+|.-...... ...+...||+|+....-. -.....
T Consensus 47 ~~~l~~n~~~g~~~~~~~~-~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~d~v~~~~Pk~--k~~~~~ 118 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEG-RMAVERL--ETSRAAFRCLTASGLQARLALP---WEAAAGAYDLVVLALPAG--RGTAYV 118 (381)
T ss_dssp SEEEESSCTTSTTTGGGBT-TBEEEEE--ECBHHHHHHHHHTTCCCEECCG---GGSCTTCEEEEEEECCGG--GCHHHH
T ss_pred CcEEEecCCCCccccccCC-CCceEEE--eCcHHHHHHHHHcCCCccccCC---ccCCcCCCCEEEEECCcc--hhHHHH
Confidence 4569999999988777653 3455554 3344444445556663211111 222357899999832110 001136
Q ss_pred HHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHH
Q 043503 358 EFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDR 396 (430)
Q Consensus 358 ~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~ 396 (430)
+..|.++.+.|+|||.+++..-- ....+.+.+.+..
T Consensus 119 ~~~l~~~~~~l~~g~~i~~~g~~---~~g~~~~~~~~~~ 154 (381)
T 3dmg_A 119 QASLVAAARALRMGGRLYLAGDK---NKGFERYFKEARA 154 (381)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEG---GGTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEEEcc---HHHHHHHHHHHHh
Confidence 78899999999999999987533 2334555555553
No 405
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=59.27 E-value=87 Score=35.34 Aligned_cols=122 Identities=13% Similarity=0.166 Sum_probs=67.6
Q ss_pred EEEEEcCCccHHHHHHHHcCC-EE-EEEecCCChhHHHHHHhc-CCeeEEEcccccC---------------CCC-CCce
Q 043503 279 IGLDIGGGTGTFAARMRERNV-TI-ITTSLNLDGPFNSFIASR-GLISMHISVSQRL---------------PFF-ENTL 339 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~-~V-v~vdiD~s~~~le~a~~r-g~i~~~~~d~~~l---------------pf~-d~sf 339 (430)
+++|+-||.|.+...+.+.|. ++ .++ |+++...+.-+.+ ....++..|...+ .++ .+.+
T Consensus 542 ~~iDLFaG~GGlslGl~~AG~~~vv~av--Eid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~v 619 (1002)
T 3swr_A 542 RTLDVFSGCGGLSEGFHQAGISDTLWAI--EMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDV 619 (1002)
T ss_dssp EEEEESCTTSHHHHHHHHHTSEEEEEEE--CSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTTC
T ss_pred eEEEeccCccHHHHHHHHCCCCceEEEE--ECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCCe
Confidence 579999999999999988897 44 456 5556555544433 2344555443211 122 3468
Q ss_pred eEEEEccchhhcC---C---------chhHHHHHHHHHHhccCCcEEEEee---cccc-CcCcHHHHHHHHHHcCCEEEE
Q 043503 340 DIVHSMHVLSNWI---P---------DSMLEFTLYDIYRLLRPGGIFWLDR---FFCF-GSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 340 DlV~~~~~L~~~~---~---------d~~l~~~L~ei~RvLrPGG~lvl~~---f~~~-~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
|+|+....=-.+. . ...+-..+.++.+.++|.-. ++.. +... .....+.+...+...||.+.-
T Consensus 620 Dll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~-llENV~glls~~~~~~~~~i~~~L~~lGY~v~~ 698 (1002)
T 3swr_A 620 EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFF-LLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 698 (1002)
T ss_dssp SEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEE-EEEEEGGGGTTGGGHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEE-EEeccHHHhccCcchHHHHHHHHHHhcCCeEEE
Confidence 9999843211111 0 00122234455666788633 3322 2211 122446677888999998643
No 406
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=59.26 E-value=52 Score=30.55 Aligned_cols=83 Identities=18% Similarity=0.334 Sum_probs=49.6
Q ss_pred EEEEEcC-Cc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 279 IGLDIGG-GT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 279 ~VLDIGc-Gt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
+|.=||+ |. | .++..+++.|.+|+.+ |.++...+.+.+.|. .. .+... .-...|+|+.. ++..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~--~r~~~~~~~~~~~g~-~~--~~~~~---~~~~aDvVi~a------v~~~ 78 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAI--EIAPEGRDRLQGMGI-PL--TDGDG---WIDEADVVVLA------LPDN 78 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEE--CCSHHHHHHHHHTTC-CC--CCSSG---GGGTCSEEEEC------SCHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEE--ECCHHHHHHHHhcCC-Cc--CCHHH---HhcCCCEEEEc------CCch
Confidence 3477888 75 3 4666677778998877 556655555555552 11 11111 11357999884 2333
Q ss_pred hHHHHHHHHHHhccCCcEEE
Q 043503 356 MLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lv 375 (430)
....++.++...++||..++
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHHHhCCCCCEEE
Confidence 35677778877788776543
No 407
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=58.53 E-value=42 Score=30.07 Aligned_cols=85 Identities=7% Similarity=-0.091 Sum_probs=51.5
Q ss_pred EEEEEcCCccHHHHHHHHc----CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhh
Q 043503 279 IGLDIGGGTGTFAARMRER----NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSN 350 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~----g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~ 350 (430)
.++=+|+ |.++..+++. |. |+.+ |.++...+.+. .| +.++.+|..+.. ..-...|+|++.
T Consensus 11 ~viI~G~--G~~G~~la~~L~~~g~-v~vi--d~~~~~~~~~~-~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~----- 78 (234)
T 2aef_A 11 HVVICGW--SESTLECLRELRGSEV-FVLA--EDENVRKKVLR-SG-ANFVHGDPTRVSDLEKANVRGARAVIVD----- 78 (234)
T ss_dssp EEEEESC--CHHHHHHHHHSTTSEE-EEEE--SCGGGHHHHHH-TT-CEEEESCTTCHHHHHHTTCTTCSEEEEC-----
T ss_pred EEEEECC--ChHHHHHHHHHHhCCe-EEEE--ECCHHHHHHHh-cC-CeEEEcCCCCHHHHHhcCcchhcEEEEc-----
Confidence 4577776 5666655544 66 7776 55555555555 44 677888765422 123468988884
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
.+++.....+....+-+.|+..++.
T Consensus 79 -~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 79 -LESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp -CSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred -CCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 2232345566677788888866654
No 408
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=58.15 E-value=59 Score=30.11 Aligned_cols=86 Identities=14% Similarity=0.099 Sum_probs=50.6
Q ss_pred EEEEEcCCc--cHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc
Q 043503 279 IGLDIGGGT--GTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 279 ~VLDIGcGt--G~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
+|.=||+|. +.++..+++. +.+|+++ |.++...+.+.+.|.......+.+.. -...|+|+.. ++.
T Consensus 8 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~--d~~~~~~~~~~~~g~~~~~~~~~~~~---~~~aDvVila------vp~ 76 (290)
T 3b1f_A 8 TIYIAGLGLIGASLALGIKRDHPHYKIVGY--NRSDRSRDIALERGIVDEATADFKVF---AALADVIILA------VPI 76 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEE--CSSHHHHHHHHHTTSCSEEESCTTTT---GGGCSEEEEC------SCH
T ss_pred eEEEEeeCHHHHHHHHHHHhCCCCcEEEEE--cCCHHHHHHHHHcCCcccccCCHHHh---hcCCCEEEEc------CCH
Confidence 346688776 2456666666 5788877 55566666666666532222222221 1357998884 233
Q ss_pred hhHHHHHHHHHHh-ccCCcEEE
Q 043503 355 SMLEFTLYDIYRL-LRPGGIFW 375 (430)
Q Consensus 355 ~~l~~~L~ei~Rv-LrPGG~lv 375 (430)
.....++.++... +++|..++
T Consensus 77 ~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 77 KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHHHHHHTSCCCTTCEEE
T ss_pred HHHHHHHHHHHhcCCCCCCEEE
Confidence 2356677888777 88776544
No 409
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=56.98 E-value=16 Score=36.08 Aligned_cols=89 Identities=11% Similarity=0.078 Sum_probs=55.4
Q ss_pred EEEEEcCCccHHHHHHHHcCCEEEEEecCC--Ch-hHHHHHHhcCC----eeEEEcccccCCCCCCceeEEEEccchhhc
Q 043503 279 IGLDIGGGTGTFAARMRERNVTIITTSLNL--DG-PFNSFIASRGL----ISMHISVSQRLPFFENTLDIVHSMHVLSNW 351 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~~Vv~vdiD~--s~-~~le~a~~rg~----i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~ 351 (430)
.||.++.+.|.++..++..+.+.+. |. +. .....++.+|. +.+... .+.+ ...||+|+....-
T Consensus 41 ~~~~~~d~~gal~~~~~~~~~~~~~---ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~---~~~~~~v~~~lpk--- 110 (375)
T 4dcm_A 41 PVLILNDAFGALSCALAEHKPYSIG---DSYISELATRENLRLNGIDESSVKFLDS-TADY---PQQPGVVLIKVPK--- 110 (375)
T ss_dssp CEEEECCSSSHHHHHTGGGCCEEEE---SCHHHHHHHHHHHHHTTCCGGGSEEEET-TSCC---CSSCSEEEEECCS---
T ss_pred CEEEECCCCCHHHHhhccCCceEEE---hHHHHHHHHHHHHHHcCCCccceEeccc-cccc---ccCCCEEEEEcCC---
Confidence 4699999999999998876654331 31 11 12233444555 333322 2222 3679999883211
Q ss_pred CCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 352 IPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 352 ~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
....+...|..+...|+||+.+++..
T Consensus 111 -~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 111 -TLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp -CHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred -CHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 12346778899999999999997754
No 410
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=56.66 E-value=44 Score=32.83 Aligned_cols=115 Identities=15% Similarity=0.086 Sum_probs=65.4
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
|-=||+|. | .++..+++.|.+|++. |.++...+.+.+.|... ..+...+--.....|+|+..- +....
T Consensus 25 IgiIGlG~mG~~~A~~L~~~G~~V~v~--dr~~~~~~~l~~~g~~~--~~s~~e~~~~a~~~DvVi~~v------p~~~v 94 (358)
T 4e21_A 25 IGMIGLGRMGADMVRRLRKGGHECVVY--DLNVNAVQALEREGIAG--ARSIEEFCAKLVKPRVVWLMV------PAAVV 94 (358)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHTTTCBC--CSSHHHHHHHSCSSCEEEECS------CGGGH
T ss_pred EEEECchHHHHHHHHHHHhCCCEEEEE--eCCHHHHHHHHHCCCEE--eCCHHHHHhcCCCCCEEEEeC------CHHHH
Confidence 36677764 2 4566666779999988 66666666666655421 111111110012359998842 22236
Q ss_pred HHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 358 EFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 358 ~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
+.++.++...|++|..++-.. .........+.+.+...|...+...+
T Consensus 95 ~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~vdapV 141 (358)
T 4e21_A 95 DSMLQRMTPLLAANDIVIDGG--NSHYQDDIRRADQMRAQGITYVDVGT 141 (358)
T ss_dssp HHHHHHHGGGCCTTCEEEECS--SCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEeCC--CCChHHHHHHHHHHHHCCCEEEeCCC
Confidence 778889999999887654321 11112234456667777887765443
No 411
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=55.76 E-value=44 Score=31.20 Aligned_cols=88 Identities=11% Similarity=-0.007 Sum_probs=50.1
Q ss_pred cEEEEEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHhc-----------C--C-----------eeEEEccccc
Q 043503 278 RIGLDIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIASR-----------G--L-----------ISMHISVSQR 331 (430)
Q Consensus 278 r~VLDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-----------g--~-----------i~~~~~d~~~ 331 (430)
++|.=||+|+ +.++..++..|.+|+.. |.++..++.+.++ | . +.. ..+...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~--d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAY--DINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--CSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEE--eCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 4456678876 24566666779999988 5556555444432 2 1 111 122211
Q ss_pred CCCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 332 LPFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 332 lpf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
. -...|+|+..-.- ..+....++.++...++|+..++
T Consensus 82 ~---~~~aDlVi~av~~----~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 82 A---VKDADLVIEAVPE----SLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp H---TTTCSEEEECCCS----CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred H---hccCCEEEEeccC----cHHHHHHHHHHHHhhCCCCcEEE
Confidence 1 1347988874111 11135667888888898887664
No 412
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=53.55 E-value=71 Score=32.31 Aligned_cols=134 Identities=16% Similarity=0.268 Sum_probs=70.2
Q ss_pred chhHHHHHHHccCCC-CCccEEEEEcCCccH-HHHHHHHc-CCEEEEEecCCCh------------h-H---HHHHHhcC
Q 043503 260 KLDYGIDQVLSMKPL-GTIRIGLDIGGGTGT-FAARMRER-NVTIITTSLNLDG------------P-F---NSFIASRG 320 (430)
Q Consensus 260 ~~~~~id~lL~~~p~-~~ir~VLDIGcGtG~-~a~~La~~-g~~Vv~vdiD~s~------------~-~---le~a~~rg 320 (430)
..+.+++.+...... ...++|+|.+.|+|. ++..+.++ |++++.+..++++ . + .+.+++.+
T Consensus 155 ~~~~Y~~~l~~~~~~~~~lkivvD~~nG~~~~~~~~ll~~lG~~v~~~~~~pDg~f~~~~p~p~~~~~l~~l~~~v~~~~ 234 (463)
T 1p5d_X 155 ILPRYFKQIRDDIAMAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAEN 234 (463)
T ss_dssp CHHHHHHHHHTTCCCSSCEEEEEECTTSGGGGTHHHHHHHHHEEEEEESCSCCTTCCSSCSCTTSGGGGHHHHHHHHHTT
T ss_pred hHHHHHHHHHhhhcccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCccCCCCCCCCcCCCCHHHHHHHHHHHHHhC
Confidence 345567777765543 567899999999995 44445554 7777765322211 1 1 12233333
Q ss_pred C-eeE-EEcccccCCCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcC
Q 043503 321 L-ISM-HISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIG 398 (430)
Q Consensus 321 ~-i~~-~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~G 398 (430)
. +-+ .-+|+.++-+-++. .++++.+.+..++....-.-.|++.++.+ ..+ ...+..++++.|
T Consensus 235 adlgia~DgDaDR~~~vd~~----------G~~l~gd~i~~L~a~~l~~~~~~~~vv~~-v~s-----s~~l~~~~~~~g 298 (463)
T 1p5d_X 235 ADLGLAFDGDGDRVGVVTNT----------GTIIYPDRLLMLFAKDVVSRNPGADIIFD-VKC-----TRRLIALISGYG 298 (463)
T ss_dssp CSEEEEECTTSSBEEEEETT----------CCEECHHHHHHHHHHHHHHHSTTCEEEEE-TTS-----CTHHHHHHHHTT
T ss_pred CCEEEEECCCCCeEEEEeCC----------CcEeCHHHHHHHHHHHHHHhCCCCeEEEE-ecC-----cHHHHHHHHHcC
Confidence 3 222 22355554322221 12232222333333322222577776554 222 234556778899
Q ss_pred CEEEEEEeccc
Q 043503 399 FKKLRWNVGMK 409 (430)
Q Consensus 399 fk~l~~~~~~k 409 (430)
.++.++.+|.+
T Consensus 299 ~~~~~t~tG~k 309 (463)
T 1p5d_X 299 GRPVMWKTGHS 309 (463)
T ss_dssp CEEEEECSSHH
T ss_pred CEEEEeCCcHH
Confidence 99998877754
No 413
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=53.49 E-value=37 Score=32.66 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=53.9
Q ss_pred cEEEEEcC--CccHHHHHHHHc-CCEEEEEecCCCh--hHHHHHHhcCCeeEEEccc---ccCC-----C---CCCceeE
Q 043503 278 RIGLDIGG--GTGTFAARMRER-NVTIITTSLNLDG--PFNSFIASRGLISMHISVS---QRLP-----F---FENTLDI 341 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~-g~~Vv~vdiD~s~--~~le~a~~rg~i~~~~~d~---~~lp-----f---~d~sfDl 341 (430)
.+||=+|+ |.|.++..+++. |++++++.-+.+. ...+.+++-|.-.++.... ..+. . ..+.+|+
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dv 248 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKL 248 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEE
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceE
Confidence 45688875 567888888876 9988877433322 2245555556533332211 1110 0 1346999
Q ss_pred EEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 342 VHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 342 V~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
|+-.-.- .... +..++|++||.+++...
T Consensus 249 vid~~G~---------~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 249 ALNCVGG---------KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEESSCH---------HHHH-HHHHTSCTTCEEEECCC
T ss_pred EEECCCc---------hhHH-HHHHHhccCCEEEEecC
Confidence 9974221 1123 67799999999987543
No 414
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=53.19 E-value=71 Score=26.56 Aligned_cols=107 Identities=11% Similarity=0.072 Sum_probs=56.1
Q ss_pred cEEEEEcCCc-cH-HHHHHHHcCCEEEEEecCCChhHHHHHH-hcCCeeEEEcccccCC----CCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGT-GT-FAARMRERNVTIITTSLNLDGPFNSFIA-SRGLISMHISVSQRLP----FFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGt-G~-~a~~La~~g~~Vv~vdiD~s~~~le~a~-~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~ 350 (430)
.+|+=+|+|. |. ++..+.+.|.+|+.+|.+ +...+.++ ..|. .++.++..... ..-..+|+|+..-
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~--~~~~~~~~~~~g~-~~~~~d~~~~~~l~~~~~~~ad~Vi~~~---- 92 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN--EYAFHRLNSEFSG-FTVVGDAAEFETLKECGMEKADMVFAFT---- 92 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC--GGGGGGSCTTCCS-EEEESCTTSHHHHHTTTGGGCSEEEECS----
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC--HHHHHHHHhcCCC-cEEEecCCCHHHHHHcCcccCCEEEEEe----
Confidence 3458888765 32 334444558899988544 44334333 3343 44555533211 1124589988842
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCE
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFK 400 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk 400 (430)
+.......+.++.+.+.|...++... .+. ...+.+.+.|..
T Consensus 93 --~~~~~~~~~~~~~~~~~~~~~iv~~~---~~~----~~~~~l~~~G~~ 133 (155)
T 2g1u_A 93 --NDDSTNFFISMNARYMFNVENVIARV---YDP----EKIKIFEENGIK 133 (155)
T ss_dssp --SCHHHHHHHHHHHHHTSCCSEEEEEC---SSG----GGHHHHHTTTCE
T ss_pred --CCcHHHHHHHHHHHHHCCCCeEEEEE---CCH----HHHHHHHHCCCc
Confidence 22224455566666666666665532 221 123456678866
No 415
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=51.97 E-value=33 Score=35.53 Aligned_cols=87 Identities=16% Similarity=0.099 Sum_probs=49.7
Q ss_pred cEEEEEcCCc-cHHHHHHH-HcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGGT-GTFAARMR-ERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La-~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
++|+=+|+|. |...+.++ ..|.+|+++ |.++.-.+.+.+.|. .+ .+.+.. -...|+|+..-...+.+.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~--d~~~~~~~~A~~~Ga-~~--~~l~e~---l~~aDvVi~atgt~~~i~-- 344 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVT--EIDPINALQAMMEGF-DV--VTVEEA---IGDADIVVTATGNKDIIM-- 344 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTC-EE--CCHHHH---GGGCSEEEECSSSSCSBC--
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCC-EE--ecHHHH---HhCCCEEEECCCCHHHHH--
Confidence 3457788754 33333333 338999988 555665666666665 22 222221 135899998532222111
Q ss_pred hHHHHHHHHHHhccCCcEEEEeecc
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
.+..+.+||||+++.....
T Consensus 345 ------~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 345 ------LEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp ------HHHHHHSCTTCEEEECSSS
T ss_pred ------HHHHHhcCCCcEEEEeCCC
Confidence 2566779999999876543
No 416
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=50.73 E-value=81 Score=31.83 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=68.0
Q ss_pred hhHHHHHHHccCCC-----CCccEEEEEcCCccH-HHHHHHHc-CCEEEEEecCCCh---------------hHHHHHHh
Q 043503 261 LDYGIDQVLSMKPL-----GTIRIGLDIGGGTGT-FAARMRER-NVTIITTSLNLDG---------------PFNSFIAS 318 (430)
Q Consensus 261 ~~~~id~lL~~~p~-----~~ir~VLDIGcGtG~-~a~~La~~-g~~Vv~vdiD~s~---------------~~le~a~~ 318 (430)
.+.+++.+....+. ...++|+|.+.|+|. ++..+.++ |++|+.+..++++ ...+.+++
T Consensus 154 ~~~Y~~~l~~~~~~~~~~~~~lkivvd~~nG~~~~~~~~~l~~lG~~v~~~~~~pdg~f~~~~~~p~~~~l~~l~~~v~~ 233 (455)
T 1wqa_A 154 IKPYIEAIKSKVDVEAIKKRKPFVVVDTSNGAGSLTLPYLLRELGCKVITVNAQPDGYFPARNPEPNEENLKEFMEIVKA 233 (455)
T ss_dssp HHHHHHHHHTTSCHHHHHHHCCEEEEECTTSGGGGTHHHHHHHHTCEEEEESCSCCTTCSSSCSCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHhhCChhhcccCCCEEEEECCCccHHHHHHHHHHHcCCEEEEECCcCCCCCCCCCCCCchhHHHHHHHHHHH
Confidence 34445555544321 356789999999995 44445554 8888766322221 12233334
Q ss_pred cCC-eeE-EEcccccCCCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHH
Q 043503 319 RGL-ISM-HISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDR 396 (430)
Q Consensus 319 rg~-i~~-~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~ 396 (430)
.+. +-+ .-+|+.++-+-++ . ..++..+.+..++....-.-+++|.++.+ ..+ ...+..++++
T Consensus 234 ~~adlgia~DgDaDR~~~vd~--------~--G~~l~gd~i~~lla~~l~~~~~~~~vv~t-v~s-----s~~l~~~a~~ 297 (455)
T 1wqa_A 234 LGADFGVAQDGDADRAVFIDE--------N--GRFIQGDKTFALVADAVLKEKGGGLLVTT-VAT-----SNLLDDIAKK 297 (455)
T ss_dssp HTCSEEEEECTTSCCEEEEET--------T--SCBCCHHHHHHHHHHHHHHHHTSCEEEEE-TTS-----CTHHHHHHHH
T ss_pred cCCCEEEEECCCCCeEEEEeC--------C--CCEEChhHHHHHHHHHHHHhCCCCeEEEe-ecC-----cHHHHHHHHH
Confidence 443 222 2234444332111 1 12333323333333332222446665554 232 2446677888
Q ss_pred cCCEEEEEEeccc
Q 043503 397 IGFKKLRWNVGMK 409 (430)
Q Consensus 397 ~Gfk~l~~~~~~k 409 (430)
.|.++.+..++.+
T Consensus 298 ~g~~~~~t~tG~k 310 (455)
T 1wqa_A 298 HGAKVMRTKVGDL 310 (455)
T ss_dssp TTCEEEEECSSTT
T ss_pred CCCEEEEEcCcHH
Confidence 9999999887765
No 417
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=50.62 E-value=1.3e+02 Score=30.73 Aligned_cols=95 Identities=14% Similarity=0.071 Sum_probs=55.8
Q ss_pred CCCCccEEEEEcCCc--cHHHHHHHHcCCEEEEEecCCChh------HHHHHHhcCCee----------E-EEcccccCC
Q 043503 273 PLGTIRIGLDIGGGT--GTFAARMRERNVTIITTSLNLDGP------FNSFIASRGLIS----------M-HISVSQRLP 333 (430)
Q Consensus 273 p~~~ir~VLDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~------~le~a~~rg~i~----------~-~~~d~~~lp 333 (430)
+...+++|-=||+|+ +.++..+++.|..|+..|.+.... .++.+.++|.+. + ...+.+.+
T Consensus 50 ~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al- 128 (460)
T 3k6j_A 50 EAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKL- 128 (460)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGC-
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHH-
Confidence 334566677789987 467778888899999995543211 112233344321 1 12233222
Q ss_pred CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 334 FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 334 f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
...|+|+..- .. +......++.++...++||-.|.
T Consensus 129 ---~~aDlVIeAV-pe---~~~vk~~v~~~l~~~~~~~aIla 163 (460)
T 3k6j_A 129 ---SNCDLIVESV-IE---DMKLKKELFANLENICKSTCIFG 163 (460)
T ss_dssp ---TTCSEEEECC-CS---CHHHHHHHHHHHHTTSCTTCEEE
T ss_pred ---ccCCEEEEcC-CC---CHHHHHHHHHHHHhhCCCCCEEE
Confidence 3579998841 11 11224567889999999988774
No 418
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=49.98 E-value=1.1e+02 Score=28.21 Aligned_cols=88 Identities=10% Similarity=0.139 Sum_probs=52.0
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEc-----------ccccCCCCCCceeEEEEcc
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHIS-----------VSQRLPFFENTLDIVHSMH 346 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~-----------d~~~lpf~d~sfDlV~~~~ 346 (430)
|.=||+|. | .++..+++.|.+|+.+ |.++...+.+.++|. ..... +.....-.-..+|+|+..-
T Consensus 6 i~iiG~G~~G~~~a~~l~~~g~~V~~~--~r~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 6 IAIAGAGAMGSRLGIMLHQGGNDVTLI--DQWPAHIEAIRKNGL-IADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHHCE-EEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred EEEECcCHHHHHHHHHHHhCCCcEEEE--ECCHHHHHHHHhCCE-EEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 47788875 3 4666677778998887 666666666666663 22110 1111110002689988842
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
+......++.++...++||..++.
T Consensus 83 ------~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 83 ------KAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp ------CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred ------ccccHHHHHHHHHHhcCCCCEEEE
Confidence 222366788888888888776554
No 419
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=49.06 E-value=1.1e+02 Score=29.04 Aligned_cols=85 Identities=7% Similarity=-0.094 Sum_probs=52.7
Q ss_pred EEEEEcCCccHHHHHHHHc----CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhh
Q 043503 279 IGLDIGGGTGTFAARMRER----NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSN 350 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~----g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~ 350 (430)
.++=+|+ |.++..+++. |. |+.+ |.++...+ +.+.+ +.++.+|..+.. ..-...|.|++.
T Consensus 117 ~viI~G~--G~~g~~l~~~L~~~g~-v~vi--d~~~~~~~-~~~~~-~~~i~gd~~~~~~L~~a~i~~a~~vi~~----- 184 (336)
T 1lnq_A 117 HVVICGW--SESTLECLRELRGSEV-FVLA--EDENVRKK-VLRSG-ANFVHGDPTRVSDLEKANVRGARAVIVD----- 184 (336)
T ss_dssp EEEEESC--CHHHHHHHTTGGGSCE-EEEE--SCGGGHHH-HHHTT-CEEEESCTTSHHHHHHTCSTTEEEEEEC-----
T ss_pred CEEEECC--cHHHHHHHHHHHhCCc-EEEE--eCChhhhh-HHhCC-cEEEEeCCCCHHHHHhcChhhccEEEEc-----
Confidence 4566665 6777777654 66 7777 55566666 55544 578888765432 223568988884
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
.+++..........|-+.|...++.
T Consensus 185 -~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 185 -LESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp -CSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred -CCccHHHHHHHHHHHHHCCCCeEEE
Confidence 2232345566677788888876654
No 420
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=48.72 E-value=72 Score=29.92 Aligned_cols=108 Identities=15% Similarity=0.147 Sum_probs=62.2
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc-hh
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD-SM 356 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d-~~ 356 (430)
|-=||+|. | .++..+++.|.+|++.|. ++...+.+.+.|.. ...+.+.+- . .|+|+.. +++ ..
T Consensus 18 I~vIG~G~mG~~~A~~l~~~G~~V~~~dr--~~~~~~~~~~~g~~--~~~~~~~~~---~-aDvvi~~------vp~~~~ 83 (296)
T 3qha_A 18 LGYIGLGNMGAPMATRMTEWPGGVTVYDI--RIEAMTPLAEAGAT--LADSVADVA---A-ADLIHIT------VLDDAQ 83 (296)
T ss_dssp EEEECCSTTHHHHHHHHTTSTTCEEEECS--STTTSHHHHHTTCE--ECSSHHHHT---T-SSEEEEC------CSSHHH
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEeC--CHHHHHHHHHCCCE--EcCCHHHHH---h-CCEEEEE------CCChHH
Confidence 36678775 3 466677777999998844 44445555555541 112222221 2 7998874 222 23
Q ss_pred HHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 357 LEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 357 l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
.+..+.++...++||..++-.. .......+.+.+.+.+.|...+.
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~s--t~~~~~~~~~~~~~~~~g~~~~~ 128 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHS--TISDTTAVELARDLKARDIHIVD 128 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECS--CCCHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEeC--CCCHHHHHHHHHHHHHcCCEEEe
Confidence 5667788888899887665421 11122334556666667776553
No 421
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=48.50 E-value=1.4e+02 Score=32.24 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=24.6
Q ss_pred EEEEEcCCccHHHHHHHHcC------CEE-EEEecCCChhHHHHH
Q 043503 279 IGLDIGGGTGTFAARMRERN------VTI-ITTSLNLDGPFNSFI 316 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g------~~V-v~vdiD~s~~~le~a 316 (430)
+++|+=||.|.++.-+.+.| +++ .++ |+++.+.+.-
T Consensus 214 tvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~Av--E~d~~A~~Ty 256 (784)
T 4ft4_B 214 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAV--DFNSFACQSL 256 (784)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEE--ESCHHHHHHH
T ss_pred eEEEeCcCccHHHHHHHHhCcccCCceeEEEEE--eCCHHHHHHH
Confidence 57999999999988887765 444 455 4445444433
No 422
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=48.49 E-value=1.2e+02 Score=30.59 Aligned_cols=89 Identities=17% Similarity=0.246 Sum_probs=52.8
Q ss_pred CccEEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHh-----------cCC----------eeEEEcccccC
Q 043503 276 TIRIGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIAS-----------RGL----------ISMHISVSQRL 332 (430)
Q Consensus 276 ~ir~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~-----------rg~----------i~~~~~d~~~l 332 (430)
.+++|.=||+|. | .++..++..|.+|+.+ |.++..++.+.+ +|. ..+ ..+.+.+
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~--D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~ 112 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAV--ESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL 112 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEE--CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEE--ECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH
Confidence 455678899987 3 5677777779999988 555554443322 111 122 2233221
Q ss_pred CCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 333 PFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 333 pf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
...|+|+..- .. .......++.++...++||..++
T Consensus 113 ----~~aDlVIeaV-pe---~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 113 ----STVDLVVEAV-FE---DMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp ----TTCSEEEECC-CS---CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred ----CCCCEEEEcC-CC---CHHHHHHHHHHHHhhCCCCeEEE
Confidence 3579998842 11 11123567888888998887664
No 423
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=48.37 E-value=53 Score=33.87 Aligned_cols=114 Identities=15% Similarity=0.177 Sum_probs=61.9
Q ss_pred EEEc-CCccH--HHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcc-cccCCCCCCceeEEEEccchhhcCCchh
Q 043503 281 LDIG-GGTGT--FAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISV-SQRLPFFENTLDIVHSMHVLSNWIPDSM 356 (430)
Q Consensus 281 LDIG-cGtG~--~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d-~~~lpf~d~sfDlV~~~~~L~~~~~d~~ 356 (430)
.=|| ||+|- ++..+.++|++|.+.|....+++.+..++.|. .++.+. ...+. ..+|+|+.+..+..-.|.
T Consensus 23 ~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi-~~~~G~~~~~~~---~~~d~vV~Spgi~~~~p~-- 96 (524)
T 3hn7_A 23 HILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGV-TIEEGYLIAHLQ---PAPDLVVVGNAMKRGMDV-- 96 (524)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTC-EEEESCCGGGGC---SCCSEEEECTTCCTTSHH--
T ss_pred EEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCC-EEECCCCHHHcC---CCCCEEEECCCcCCCCHH--
Confidence 5555 46663 45566777999999987655566666666665 555552 22221 348999987665321111
Q ss_pred HHHHHH---------H-HHHhc-cCCcEEEEeeccccCcC-cHHHHHHHHHHcCCEEE
Q 043503 357 LEFTLY---------D-IYRLL-RPGGIFWLDRFFCFGSQ-LNETYVPMLDRIGFKKL 402 (430)
Q Consensus 357 l~~~L~---------e-i~RvL-rPGG~lvl~~f~~~~~~-~~~~~~~ll~~~Gfk~l 402 (430)
+..+.. | +.+.+ +..-.+.++. .++.. ....+..+++..|++..
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTG--TnGKTTTt~li~~iL~~~G~~~~ 152 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAG--THGKTTTTTMLAWILHYAGIDAG 152 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEEC--SSCHHHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEEC--CCCHHHHHHHHHHHHHHcCCCce
Confidence 222211 1 23322 3223444543 22322 23457788899998753
No 424
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=48.19 E-value=1.3e+02 Score=30.58 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=68.7
Q ss_pred hhHHHHHHHccCC--CCCccEEEEEcCCccH-HHHHHHHc-CCEEEEEecCCCh-------------hHHHHHHhcCC-e
Q 043503 261 LDYGIDQVLSMKP--LGTIRIGLDIGGGTGT-FAARMRER-NVTIITTSLNLDG-------------PFNSFIASRGL-I 322 (430)
Q Consensus 261 ~~~~id~lL~~~p--~~~ir~VLDIGcGtG~-~a~~La~~-g~~Vv~vdiD~s~-------------~~le~a~~rg~-i 322 (430)
.+.+++.+....+ ....++|+|.+.|+|. ++..+.++ |++|+.+..+++. ...+.+++.+. +
T Consensus 177 ~~~Y~~~l~~~~~~~~~~lkivvD~~nG~~~~~~~~ll~~lG~~v~~l~~~pDg~f~n~~~~~~~~~~l~~~v~~~~adl 256 (469)
T 3pdk_A 177 GQKYLQYIKQTVEEDFSGLHIALDCAHGATSSLAPYLFADLEADISTMGTSPNGMNINDGVGSTHPEVLAELVKEKGADI 256 (469)
T ss_dssp HHHHHHHHHTTCSSCCTTCEEEEECTTSTTTTHHHHHHHHTTCEEEEESCCCCSSCTTSSCSTTSTHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHhcCcccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCCcCCCCCCCCCCCCCHHHHHHHHHhcCCcE
Confidence 4455777766543 3457899999999995 44455544 9888765332221 12233444443 2
Q ss_pred eE-EEcccccCCCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhcc--CCcEEEEeeccccCcCcHHHHHHHHHHcCC
Q 043503 323 SM-HISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLR--PGGIFWLDRFFCFGSQLNETYVPMLDRIGF 399 (430)
Q Consensus 323 ~~-~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLr--PGG~lvl~~f~~~~~~~~~~~~~ll~~~Gf 399 (430)
-+ .-+|+.++- ++... .+++..+.+..++.....--+ ||+.++. +..+ ...+..++++.|.
T Consensus 257 gia~DgDaDR~~--------~vd~~--G~~l~gd~i~~Lla~~l~~~~~l~~~~vv~-tv~s-----s~~l~~~~~~~G~ 320 (469)
T 3pdk_A 257 GLAFDGDGDRLI--------AVDEK--GNIVDGDQIMFICAKYMKETGQLKHNTVVS-TVMS-----NLGFYKALEANGI 320 (469)
T ss_dssp EEEECTTSSBEE--------EEETT--SCEECHHHHHHHHHHHHHHTTCSGGGEEEE-ETTS-----CHHHHHHHHHTTC
T ss_pred EEEECCCCCeEE--------EECCC--CcEEChhHHHHHHHHHHHHhCCCCCCeEEE-eecC-----cHHHHHHHHHcCC
Confidence 22 223444432 12211 122332223333332211111 4565544 3332 2456677888999
Q ss_pred EEEEEEeccc
Q 043503 400 KKLRWNVGMK 409 (430)
Q Consensus 400 k~l~~~~~~k 409 (430)
+++++.+|.+
T Consensus 321 ~~~~t~tG~k 330 (469)
T 3pdk_A 321 TSDKTAVGDR 330 (469)
T ss_dssp EEEEECSSHH
T ss_pred EEEEEcCchH
Confidence 9998877755
No 425
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=47.88 E-value=66 Score=32.46 Aligned_cols=133 Identities=12% Similarity=0.041 Sum_probs=67.4
Q ss_pred hhHHHHHHHccCC-----CCCccEEEEEcCCccH-HHHHHHHc-CCEEEEEecCCCh---------------hHHHHHHh
Q 043503 261 LDYGIDQVLSMKP-----LGTIRIGLDIGGGTGT-FAARMRER-NVTIITTSLNLDG---------------PFNSFIAS 318 (430)
Q Consensus 261 ~~~~id~lL~~~p-----~~~ir~VLDIGcGtG~-~a~~La~~-g~~Vv~vdiD~s~---------------~~le~a~~ 318 (430)
.+.+++.+....+ ....++|+|.+.|+|. ++..+.++ |++|+.+..++++ ...+.+++
T Consensus 152 ~~~Y~~~l~~~~~~~~i~~~~lkivvd~~~G~~~~~~~~~l~~lG~~v~~~~~~pDg~F~~~~p~p~~~~l~~l~~~v~~ 231 (455)
T 2f7l_A 152 ISTYVNGILSHVDIEKIKKKNYKVLIDPANSVGALSTPLVARALGCKIYTINGNLDPLFSARQPEPTFDSLKETAEVVKT 231 (455)
T ss_dssp HHHHHHHHHTTSCHHHHHHHCCEEEEECTTTGGGGTHHHHHHHTTCEEEEBSCSCCTTCTTSCSSCCTTTSHHHHHHHHH
T ss_pred HHHHHHHHHhhcChhhcccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcCCCCCCCCCcCcchHHHHHHHHHHHH
Confidence 3444555554432 1357889999999995 44445544 8888766322221 12233334
Q ss_pred cCC-eeE-EEcccccCCCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhcc--CCcEEEEeeccccCcCcHHHHHHHH
Q 043503 319 RGL-ISM-HISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLR--PGGIFWLDRFFCFGSQLNETYVPML 394 (430)
Q Consensus 319 rg~-i~~-~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLr--PGG~lvl~~f~~~~~~~~~~~~~ll 394 (430)
.+. +-+ .-+|+.++-+-|+. .+++....+..++....-.-+ ++|.++.+ ..+ ...+..++
T Consensus 232 ~~adlgia~DgDaDR~~~vd~~----------g~~l~gd~i~~lla~~l~~~~~~~~~~vv~t-v~s-----s~~l~~~a 295 (455)
T 2f7l_A 232 LKVDLGVAHDGDADRAIFIDSE----------GRVQWGDRSGTLLSYWASVKNPKAIKKIVTA-VSS-----SSLVEEYL 295 (455)
T ss_dssp TTCSEEEECCTTSCCCEEEETT----------SCBCCHHHHHHHHHHHHHHTCTTSCSEEEEE-TTS-----CTHHHHHH
T ss_pred cCCCEEEEECCCCCeEEEEcCC----------CeEEChHHHHHHHHHHHHHhCccCCCeEEEE-ecc-----cHHHHHHH
Confidence 443 211 12344444321111 123333223333333221112 56766554 222 24466778
Q ss_pred HHcCCEEEEEEeccc
Q 043503 395 DRIGFKKLRWNVGMK 409 (430)
Q Consensus 395 ~~~Gfk~l~~~~~~k 409 (430)
++.|.++.+..+|.+
T Consensus 296 ~~~g~~~~~t~~G~k 310 (455)
T 2f7l_A 296 SKYNIQVDWTKVGSV 310 (455)
T ss_dssp HTTTCEEEEECSCHH
T ss_pred HHcCCEEEEEcCcHH
Confidence 899999998877754
No 426
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=47.62 E-value=67 Score=30.46 Aligned_cols=90 Identities=18% Similarity=0.206 Sum_probs=51.6
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcc----------cccCCCCCCceeEEEEcc
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISV----------SQRLPFFENTLDIVHSMH 346 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d----------~~~lpf~d~sfDlV~~~~ 346 (430)
+|.=||+|. | .++..+++.|.+|+.+ |.++...+...+.+.+.+.... .....-.-..+|+|+..-
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAW--DIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEE--eCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 347788876 3 4566666778898877 6666655655555322221100 001000013589988842
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
+......++.++...+++|..++.
T Consensus 84 ------~~~~~~~~~~~l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 84 ------PAIHHASIAANIASYISEGQLIIL 107 (359)
T ss_dssp ------CGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred ------CchHHHHHHHHHHHhCCCCCEEEE
Confidence 222356788888888999876554
No 427
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=46.75 E-value=2.2e+02 Score=28.97 Aligned_cols=133 Identities=15% Similarity=0.222 Sum_probs=67.8
Q ss_pred hhHHHHHHHccCCC-CCccEEEEEcCCccH-HHHHHHHc-CCEEEEEecCCC------------hhHH----HHHHhcCC
Q 043503 261 LDYGIDQVLSMKPL-GTIRIGLDIGGGTGT-FAARMRER-NVTIITTSLNLD------------GPFN----SFIASRGL 321 (430)
Q Consensus 261 ~~~~id~lL~~~p~-~~ir~VLDIGcGtG~-~a~~La~~-g~~Vv~vdiD~s------------~~~l----e~a~~rg~ 321 (430)
.+.+++.+....+. ...++|+|.+.|+|. ++..+.++ |++|+.+-.+++ +..+ +.+++.+.
T Consensus 178 ~~~Yi~~l~~~i~~~~~lkIvvD~~~Ga~~~~~~~il~~lG~~v~~~~~~pDg~Fp~~~p~P~~~~~l~~l~~~v~~~~a 257 (485)
T 3uw2_A 178 ADQYVERIVGDIKLTRPLKLVVDAGNGVAGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKATDA 257 (485)
T ss_dssp HHHHHHHHHTTCCCSSCCCEEEECTTSTHHHHHHHHHHHTTCCEEEESCSCCTTCCSSCSCTTSGGGGHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhcCcccCCEEEEEcCCCcHHHHHHHHHHHcCCeEEEecCccCCCCCCCCcCCCCHHHHHHHHHHHHhhCC
Confidence 44557777665442 357899999999985 55555555 888776532222 1122 33344443
Q ss_pred -eeEE-EcccccCCCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCC
Q 043503 322 -ISMH-ISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGF 399 (430)
Q Consensus 322 -i~~~-~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gf 399 (430)
+-+. -+|+.++-+-+. . ..++..+.+..++....---+||+.++.+ ..+ ...+...+++.|.
T Consensus 258 Dlgia~DgDaDR~~vvd~--------~--G~~i~gd~~~alla~~ll~~~~~~~vv~~-v~s-----s~~l~~~~~~~g~ 321 (485)
T 3uw2_A 258 EIGFAFDGDGDRLGVVTK--------D--GQIIYPDRQLMLFAEEVLSRNPGAQIIYD-VKC-----TRNLARWVREKGG 321 (485)
T ss_dssp CEEEEECTTSSCEEEECT--------T--SCBCCHHHHHHHHHHHHHHHSTTCEEEEE-TTS-----CTHHHHHHHHTTC
T ss_pred CEEEEECCCCCeEEEEeC--------C--CceECHHHHHHHHHHHHHHhCCCCeEEEE-eCC-----cHHHHHHHHHcCC
Confidence 2222 235555432111 1 12233222333333222112477776554 222 2345567778888
Q ss_pred EEEEEEeccc
Q 043503 400 KKLRWNVGMK 409 (430)
Q Consensus 400 k~l~~~~~~k 409 (430)
+.+++.++.+
T Consensus 322 ~~~~t~vG~k 331 (485)
T 3uw2_A 322 EPLMWKTGHS 331 (485)
T ss_dssp EEEEECSSHH
T ss_pred EEEEEcCChH
Confidence 8888766643
No 428
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=43.75 E-value=3e+02 Score=31.99 Aligned_cols=122 Identities=13% Similarity=0.205 Sum_probs=66.1
Q ss_pred EEEEEcCCccHHHHHHHHcCC-E-EEEEecCCChhHHHHHHhc-CCeeEEEcccccC---------------CCC-CCce
Q 043503 279 IGLDIGGGTGTFAARMRERNV-T-IITTSLNLDGPFNSFIASR-GLISMHISVSQRL---------------PFF-ENTL 339 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g~-~-Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~l---------------pf~-d~sf 339 (430)
+++|+-||.|.+...+.+.|. + +.++ |+++...+.-+.+ ....++..|...+ .++ .+.+
T Consensus 853 ~viDLFsG~GGlslGfe~AG~~~vv~av--Eid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~~~v 930 (1330)
T 3av4_A 853 RTLDVFSGCGGLSEGFHQAGISETLWAI--EMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDV 930 (1330)
T ss_dssp EEEEETCTTSHHHHHHHHTTSEEEEEEE--CCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCCTTTC
T ss_pred eEEecccCccHHHHHHHHCCCCceEEEE--ECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhccccCcc
Confidence 569999999999999988897 4 4455 5556555444433 2234444442211 111 2468
Q ss_pred eEEEEccchhhcC---C--c----h---hHHHHHHHHHHhccCCcEEEEee---cccc-CcCcHHHHHHHHHHcCCEEEE
Q 043503 340 DIVHSMHVLSNWI---P--D----S---MLEFTLYDIYRLLRPGGIFWLDR---FFCF-GSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 340 DlV~~~~~L~~~~---~--d----~---~l~~~L~ei~RvLrPGG~lvl~~---f~~~-~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
|+|+....=-.+. . . + .+-..+.++.+.++|. +|++.. +... .....+.+...+...||.+.-
T Consensus 931 Dvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk-~fv~ENV~glls~~~g~~~~~il~~L~~lGY~v~~ 1009 (1330)
T 3av4_A 931 EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR-FFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1009 (1330)
T ss_dssp SEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCS-EEEEEEEGGGGTTTTTHHHHHHHHHHHHHTCEEEE
T ss_pred ceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCc-EEEEeccHHHhccCccHHHHHHHHHHHhcCCeeeE
Confidence 9999743211111 0 0 0 1112233455566786 333322 2211 122456677888999998653
No 429
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=43.71 E-value=83 Score=32.48 Aligned_cols=84 Identities=17% Similarity=0.193 Sum_probs=47.4
Q ss_pred cEEEEEcCCcc---HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc
Q 043503 278 RIGLDIGGGTG---TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 278 r~VLDIGcGtG---~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
++++=+|+| | ..+..++..|++|+.+ |.++...+.+...+. ...+.+.. ....|+|+......+.+.
T Consensus 266 KtVvVtGaG-gIG~aiA~~Laa~GA~Viv~--D~~~~~a~~Aa~~g~---dv~~lee~---~~~aDvVi~atG~~~vl~- 335 (488)
T 3ond_A 266 KVAVVAGYG-DVGKGCAAALKQAGARVIVT--EIDPICALQATMEGL---QVLTLEDV---VSEADIFVTTTGNKDIIM- 335 (488)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTC---EECCGGGT---TTTCSEEEECSSCSCSBC-
T ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEE--cCCHHHHHHHHHhCC---ccCCHHHH---HHhcCEEEeCCCChhhhh-
Confidence 456778877 3 2444455559999988 555544455555553 12222222 245898887433222221
Q ss_pred hhHHHHHHHHHHhccCCcEEEEee
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.+..+.+++|+.++-..
T Consensus 336 -------~e~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 336 -------LDHMKKMKNNAIVCNIG 352 (488)
T ss_dssp -------HHHHTTSCTTEEEEESS
T ss_pred -------HHHHHhcCCCeEEEEcC
Confidence 24567789999876543
No 430
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=43.60 E-value=1.8e+02 Score=26.11 Aligned_cols=63 Identities=14% Similarity=-0.005 Sum_probs=40.3
Q ss_pred EEEEEcCCccHHHHHHHH----cCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccch
Q 043503 279 IGLDIGGGTGTFAARMRE----RNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~----~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L 348 (430)
+||=.|+ |.++..+++ +|.+|++++- ++...+.... ..+.++.+|..++. -..+|+|+.....
T Consensus 7 ~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~-~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 7 TLLSFGH--GYTARVLSRALAPQGWRIIGTSR--NPDQMEAIRA-SGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp EEEEETC--CHHHHHHHHHHGGGTCEEEEEES--CGGGHHHHHH-TTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred cEEEECC--cHHHHHHHHHHHHCCCEEEEEEc--ChhhhhhHhh-CCCeEEEecccccc--cCCCCEEEECCCc
Confidence 4588884 766666554 4899998854 3333333322 34788888887765 4568988875443
No 431
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=41.79 E-value=1.3e+02 Score=23.81 Aligned_cols=106 Identities=12% Similarity=0.076 Sum_probs=53.1
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEEccchhhcCC
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~~~~L~~~~~ 353 (430)
|+=+|+|. | .++..+.+.|.+|+.+|. ++...+.+.+.+. .++.+|..+.. ..-..+|+|+..-..
T Consensus 9 v~I~G~G~iG~~~a~~l~~~g~~v~~~d~--~~~~~~~~~~~~~-~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~----- 80 (144)
T 2hmt_A 9 FAVIGLGRFGGSIVKELHRMGHEVLAVDI--NEEKVNAYASYAT-HAVIANATEENELLSLGIRNFEYVIVAIGA----- 80 (144)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEES--CHHHHHTTTTTCS-EEEECCTTCHHHHHTTTGGGCSEEEECCCS-----
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHhCC-EEEEeCCCCHHHHHhcCCCCCCEEEECCCC-----
Confidence 47788643 2 233333444888888744 4443443333343 45555543211 112468998874221
Q ss_pred chhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEE
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKK 401 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~ 401 (430)
+......+.+..+.+.+. .++.. ..+ ..+.+.+++.|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~-~ii~~---~~~----~~~~~~l~~~g~~~ 120 (144)
T 2hmt_A 81 NIQASTLTTLLLKELDIP-NIWVK---AQN----YYHHKVLEKIGADR 120 (144)
T ss_dssp CHHHHHHHHHHHHHTTCS-EEEEE---CCS----HHHHHHHHHHTCSE
T ss_pred chHHHHHHHHHHHHcCCC-eEEEE---eCC----HHHHHHHHHcCCCE
Confidence 101333455666667775 55442 111 23445677777653
No 432
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=41.72 E-value=1.4e+02 Score=27.22 Aligned_cols=108 Identities=12% Similarity=-0.008 Sum_probs=58.9
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
|.=||+|. | .++..+++ |.+|+.+ |.++...+.+.+.|.. ... .... -...|+|+..-.- ....
T Consensus 4 i~iiG~G~~G~~~a~~l~~-g~~V~~~--~~~~~~~~~~~~~g~~-~~~--~~~~---~~~~D~vi~~v~~-----~~~~ 69 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLAR-RFPTLVW--NRTFEKALRHQEEFGS-EAV--PLER---VAEARVIFTCLPT-----TREV 69 (289)
T ss_dssp EEEECCSTTHHHHHHHHHT-TSCEEEE--CSSTHHHHHHHHHHCC-EEC--CGGG---GGGCSEEEECCSS-----HHHH
T ss_pred EEEEcccHHHHHHHHHHhC-CCeEEEE--eCCHHHHHHHHHCCCc-ccC--HHHH---HhCCCEEEEeCCC-----hHHH
Confidence 35678886 3 46677777 9888877 5555545555444442 111 1111 1357999884211 1125
Q ss_pred HHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 358 EFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 358 ~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
..++.++...+++|..++...-. .....+.+.+.+.+.|...+.
T Consensus 70 ~~v~~~l~~~l~~~~~vv~~s~~--~~~~~~~l~~~~~~~g~~~~~ 113 (289)
T 2cvz_A 70 YEVAEALYPYLREGTYWVDATSG--EPEASRRLAERLREKGVTYLD 113 (289)
T ss_dssp HHHHHHHTTTCCTTEEEEECSCC--CHHHHHHHHHHHHTTTEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEECCCC--CHHHHHHHHHHHHHcCCEEEE
Confidence 56777788888888765542111 111234566666666655443
No 433
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=40.03 E-value=70 Score=29.89 Aligned_cols=82 Identities=15% Similarity=0.134 Sum_probs=48.1
Q ss_pred EEEEcCCc-c-HHHHHHHHcCC---EEEEEecCCChhHHHHHHhc-CCeeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 280 GLDIGGGT-G-TFAARMRERNV---TIITTSLNLDGPFNSFIASR-GLISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~---~Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
|-=||||. | .++..+++.|. +|+.. |.++...+.+.++ |. .......+.+ ...|+|+.. ++
T Consensus 6 I~iIG~G~mG~aia~~l~~~g~~~~~V~v~--dr~~~~~~~l~~~~gi-~~~~~~~~~~----~~aDvVila------v~ 72 (280)
T 3tri_A 6 ITFIGGGNMARNIVVGLIANGYDPNRICVT--NRSLDKLDFFKEKCGV-HTTQDNRQGA----LNADVVVLA------VK 72 (280)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCGGGEEEE--CSSSHHHHHHHHTTCC-EEESCHHHHH----SSCSEEEEC------SC
T ss_pred EEEEcccHHHHHHHHHHHHCCCCCCeEEEE--eCCHHHHHHHHHHcCC-EEeCChHHHH----hcCCeEEEE------eC
Confidence 36678875 2 46666666677 78877 5555556655554 54 2221111111 246888874 23
Q ss_pred chhHHHHHHHHHHh-ccCCcEE
Q 043503 354 DSMLEFTLYDIYRL-LRPGGIF 374 (430)
Q Consensus 354 d~~l~~~L~ei~Rv-LrPGG~l 374 (430)
......++.++... ++++-.+
T Consensus 73 p~~~~~vl~~l~~~~l~~~~ii 94 (280)
T 3tri_A 73 PHQIKMVCEELKDILSETKILV 94 (280)
T ss_dssp GGGHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHhhccCCCeEE
Confidence 33477888888887 7766444
No 434
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=39.20 E-value=16 Score=35.05 Aligned_cols=68 Identities=24% Similarity=0.285 Sum_probs=38.3
Q ss_pred CCceeEEEEccc----hhhcCC--c--hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 336 ENTLDIVHSMHV----LSNWIP--D--SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 336 d~sfDlV~~~~~----L~~~~~--d--~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
-+.||+|+++-- .+|+.. | -.+..+-.+..+.|+|||.+++..+--.+. ..+.+...+.+ -|+..+..
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR-~SE~vV~alAR-kF~~~rv~ 284 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADR-TSERVICVLGR-KFRSSRAL 284 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSH-HHHHHHHHHHT-TEEEEEEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccccc-chHHHHHHHHh-hheeeeee
Confidence 378999999421 233321 1 023445567889999999999976554332 22333333333 25555433
No 435
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=39.07 E-value=69 Score=31.28 Aligned_cols=86 Identities=8% Similarity=0.091 Sum_probs=51.5
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCee-----------EE-EcccccCCCCCCceeEEEEc
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLIS-----------MH-ISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~-----------~~-~~d~~~lpf~d~sfDlV~~~ 345 (430)
|.=||+|. | .++..+++.|.+|+.. +.++...+.+.+.+... +. ..|.... -...|+|+..
T Consensus 32 I~VIGaG~mG~alA~~La~~G~~V~l~--~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea---~~~aDvVila 106 (356)
T 3k96_A 32 IAILGAGSWGTALALVLARKGQKVRLW--SYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKAS---LEGVTDILIV 106 (356)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEE--CSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHH---HTTCCEEEEC
T ss_pred EEEECccHHHHHHHHHHHHCCCeEEEE--eCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHH---HhcCCEEEEC
Confidence 36688876 2 4666677778888887 55566566655544211 11 1111110 1246888874
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
++......++.++...++|+-.++.
T Consensus 107 ------Vp~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 107 ------VPSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp ------CCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred ------CCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 2333477889999999998876553
No 436
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=38.78 E-value=78 Score=30.12 Aligned_cols=65 Identities=12% Similarity=0.185 Sum_probs=35.7
Q ss_pred ccEEEEEcCCc-cH-H-HHHHHHc-CCEEEEEecCCChhHH-HHHHhcCCeeEEEcccccCCCCCCceeEEEEc
Q 043503 277 IRIGLDIGGGT-GT-F-AARMRER-NVTIITTSLNLDGPFN-SFIASRGLISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 277 ir~VLDIGcGt-G~-~-a~~La~~-g~~Vv~vdiD~s~~~l-e~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
+|+++ ||||. |. . ...+... +++++++ .|.++... +++++.|....+ .|.+.+ +.+...|+|+..
T Consensus 24 irigi-IG~G~ig~~~~~~~~~~~~~~~lvav-~d~~~~~a~~~a~~~g~~~~y-~d~~el-l~~~~iDaV~I~ 93 (350)
T 4had_A 24 LRFGI-ISTAKIGRDNVVPAIQDAENCVVTAI-ASRDLTRAREMADRFSVPHAF-GSYEEM-LASDVIDAVYIP 93 (350)
T ss_dssp EEEEE-ESCCHHHHHTHHHHHHHCSSEEEEEE-ECSSHHHHHHHHHHHTCSEEE-SSHHHH-HHCSSCSEEEEC
T ss_pred cEEEE-EcChHHHHHHHHHHHHhCCCeEEEEE-ECCCHHHHHHHHHHcCCCeee-CCHHHH-hcCCCCCEEEEe
Confidence 45544 88885 43 2 3334444 7888876 47666544 444555654333 333332 234568998874
No 437
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=38.77 E-value=1.2e+02 Score=27.52 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=47.6
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCE-EEEEecCCChhHHHHHHhc-CCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 280 GLDIGGGT-G-TFAARMRERNVT-IITTSLNLDGPFNSFIASR-GLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~-Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
|.=||+|. | .++..+++.|.+ |..+ |.++...+.+.++ |. .. ..+.+.. -...|+|+.. .++.
T Consensus 13 i~iiG~G~mG~~~a~~l~~~g~~~v~~~--~~~~~~~~~~~~~~g~-~~-~~~~~~~---~~~~Dvvi~a------v~~~ 79 (266)
T 3d1l_A 13 IVLIGAGNLATNLAKALYRKGFRIVQVY--SRTEESARELAQKVEA-EY-TTDLAEV---NPYAKLYIVS------LKDS 79 (266)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEE--CSSHHHHHHHHHHTTC-EE-ESCGGGS---CSCCSEEEEC------CCHH
T ss_pred EEEEcCCHHHHHHHHHHHHCCCeEEEEE--eCCHHHHHHHHHHcCC-ce-eCCHHHH---hcCCCEEEEe------cCHH
Confidence 36688874 3 355555556887 5666 6666655555544 53 22 2233222 1357999884 2222
Q ss_pred hHHHHHHHHHHhccCCcEEE
Q 043503 356 MLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lv 375 (430)
....++.++...+++|..++
T Consensus 80 ~~~~v~~~l~~~~~~~~ivv 99 (266)
T 3d1l_A 80 AFAELLQGIVEGKREEALMV 99 (266)
T ss_dssp HHHHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHHHHHhhcCCCcEEE
Confidence 35667777877788876654
No 438
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=38.32 E-value=16 Score=35.27 Aligned_cols=43 Identities=23% Similarity=0.294 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEE
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKK 401 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~ 401 (430)
.++..|..+..+|+|||.+.+..|...+. +.....+.+.+|+.
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfHSLED---RiVK~~~~~~~~~~ 253 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFHSLED---RVVKRFLRESGLKV 253 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECSHHHH---HHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecCcHHH---HHHHHHHHhCCccc
Confidence 57889999999999999999988886543 33444555455553
No 439
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=38.29 E-value=1.7e+02 Score=28.09 Aligned_cols=89 Identities=6% Similarity=-0.019 Sum_probs=51.5
Q ss_pred cEEEEEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHh-----------cCCee-----------E-EEcccccC
Q 043503 278 RIGLDIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIAS-----------RGLIS-----------M-HISVSQRL 332 (430)
Q Consensus 278 r~VLDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~-----------rg~i~-----------~-~~~d~~~l 332 (430)
++|-=||+|+ +.++..++..|++|+.. |.++..++.+.+ .|.+. + ...+....
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~--d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLY--DIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEE--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 4456688876 35777778889999988 555655554432 23211 1 11222110
Q ss_pred CCCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 333 PFFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 333 pf~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
-...|+|+..-.- +......++.++...++||-.++
T Consensus 85 ---v~~aDlVieavpe----~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 85 ---VEGVVHIQECVPE----NLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp ---TTTEEEEEECCCS----CHHHHHHHHHHHHTTCCSSSEEE
T ss_pred ---HhcCCEEEEeccC----CHHHHHHHHHHHHhhCCCCeEEE
Confidence 1357998874210 11124567888888898888664
No 440
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=38.27 E-value=46 Score=31.94 Aligned_cols=87 Identities=21% Similarity=0.140 Sum_probs=48.9
Q ss_pred cEEEEEcC--CccHHHHHHHHc--CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC-----CCCCceeEEEEccch
Q 043503 278 RIGLDIGG--GTGTFAARMRER--NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP-----FFENTLDIVHSMHVL 348 (430)
Q Consensus 278 r~VLDIGc--GtG~~a~~La~~--g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp-----f~d~sfDlV~~~~~L 348 (430)
.+||=.|+ |.|.++..+++. +.+|++++ ++.-.+.++ .|.-.++. ....+. ...+.+|+|+..-.-
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~---~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~ 218 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA---STFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCG 218 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE---CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC-
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCc
Confidence 45688887 457788888876 46888774 234445554 45433332 111110 123579999974211
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
+ .+....++|+|||.+++...
T Consensus 219 -----~-----~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 219 -----D-----NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp ----------------CTTEEEEEEEEEEC-
T ss_pred -----h-----hHHHHHHHhhcCCEEEEECC
Confidence 1 13577899999999987653
No 441
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=38.13 E-value=2.9e+02 Score=26.76 Aligned_cols=99 Identities=10% Similarity=0.019 Sum_probs=58.6
Q ss_pred ccEEEEEcCCccHHHHHHHHc---CCEEEEEecCCChhHHHH----HHh-------------------------cCCeeE
Q 043503 277 IRIGLDIGGGTGTFAARMRER---NVTIITTSLNLDGPFNSF----IAS-------------------------RGLISM 324 (430)
Q Consensus 277 ir~VLDIGcGtG~~a~~La~~---g~~Vv~vdiD~s~~~le~----a~~-------------------------rg~i~~ 324 (430)
.+.|+-+|||.=+.+-++... +.+++-+ |. +..++. ..+ .....+
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EV--D~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~ 167 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEV--DF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAV 167 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEE--EC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEEC--Cc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEE
Confidence 456799999999999999875 4566544 55 333221 111 122456
Q ss_pred EEcccccCC----------CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 325 HISVSQRLP----------FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 325 ~~~d~~~lp----------f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
+..|+.... +....-=++++-.++ .+.+.+....+|..+.+...+ |.+++.+.+
T Consensus 168 v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL-~YL~~~~~~~ll~~ia~~f~~-~~~i~yE~i 231 (334)
T 3iei_A 168 IGADLRDLSELEEKLKKCNMNTQLPTLLIAECVL-VYMTPEQSANLLKWAANSFER-AMFINYEQV 231 (334)
T ss_dssp EECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCG-GGSCHHHHHHHHHHHHHHCSS-EEEEEEEEC
T ss_pred EccccccchhHHHHHHhcCCCCCCCEEEEEchhh-hCCCHHHHHHHHHHHHHhCCC-ceEEEEecc
Confidence 666765421 222333355554444 667776788888888887754 555544444
No 442
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=37.91 E-value=1.9e+02 Score=26.66 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=63.1
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchh
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSM 356 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~ 356 (430)
+|.=||+|. | .++..+++.|.+|+.+ |.++...+.+.+.|.. . ..+.... -...|+|+..-. ....
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~--d~~~~~~~~~~~~g~~-~-~~~~~~~---~~~aDvvi~~vp-----~~~~ 72 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVF--DLVQSAVDGLVAAGAS-A-ARSARDA---VQGADVVISMLP-----ASQH 72 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEE--CSSHHHHHHHHHTTCE-E-CSSHHHH---HTTCSEEEECCS-----CHHH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEE--cCCHHHHHHHHHCCCe-E-cCCHHHH---HhCCCeEEEECC-----CHHH
Confidence 346678886 3 5677777779999988 6666666666666642 1 1121111 124699888421 1223
Q ss_pred HHHHHH---HHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 357 LEFTLY---DIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 357 l~~~L~---ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
....+. ++...+++|..++-.. .......+.+.+.+.+.|...+.
T Consensus 73 ~~~v~~~~~~~~~~l~~~~~vi~~s--t~~~~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 73 VEGLYLDDDGLLAHIAPGTLVLECS--TIAPTSARKIHAAARERGLAMLD 120 (302)
T ss_dssp HHHHHHSSSCGGGSSCSSCEEEECS--CCCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHcCchhHHhcCCCCcEEEECC--CCCHHHHHHHHHHHHHcCCEEEE
Confidence 556666 6777888887654321 11111224566667777766554
No 443
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=37.91 E-value=49 Score=33.70 Aligned_cols=85 Identities=14% Similarity=0.113 Sum_probs=45.4
Q ss_pred cEEEEEcCCc-cH-HHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 278 RIGLDIGGGT-GT-FAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 278 r~VLDIGcGt-G~-~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
++|+=+|+|. |. .+..+...|.+|+++|. ++.-...+...|. . ..+.+.. -...|+|+......+.+.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~--dp~ra~~A~~~G~-~--v~~Leea---l~~ADIVi~atgt~~lI~-- 290 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEI--DPICALQACMDGF-R--LVKLNEV---IRQVDIVITCTGNKNVVT-- 290 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS--CHHHHHHHHHTTC-E--ECCHHHH---TTTCSEEEECSSCSCSBC--
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeC--ChhhhHHHHHcCC-E--eccHHHH---HhcCCEEEECCCCcccCC--
Confidence 3457777775 22 22333334999999854 4433334444453 1 1222221 135699888432223222
Q ss_pred hHHHHHHHHHHhccCCcEEEEee
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.+..+.+|||++++-..
T Consensus 291 ------~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 291 ------REHLDRMKNSCIVCNMG 307 (435)
T ss_dssp ------HHHHHHSCTTEEEEECS
T ss_pred ------HHHHHhcCCCcEEEEec
Confidence 26667899999876543
No 444
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=37.80 E-value=77 Score=29.35 Aligned_cols=109 Identities=12% Similarity=0.014 Sum_probs=60.6
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCC-chh
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIP-DSM 356 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~-d~~ 356 (430)
|-=||+|. | .++..+++.|.+|+.. |.++...+.+.+.|.. . ..+.... -...|+|+.. ++ ...
T Consensus 4 i~iIG~G~mG~~~a~~l~~~G~~V~~~--dr~~~~~~~~~~~g~~-~-~~~~~~~---~~~aDvvi~~------vp~~~~ 70 (287)
T 3pef_A 4 FGFIGLGIMGSAMAKNLVKAGCSVTIW--NRSPEKAEELAALGAE-R-AATPCEV---VESCPVTFAM------LADPAA 70 (287)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE--CSSGGGGHHHHHTTCE-E-CSSHHHH---HHHCSEEEEC------CSSHHH
T ss_pred EEEEeecHHHHHHHHHHHHCCCeEEEE--cCCHHHHHHHHHCCCe-e-cCCHHHH---HhcCCEEEEE------cCCHHH
Confidence 35567765 2 4566666679999988 5555555655555541 1 1121111 0236888874 22 123
Q ss_pred HHHHH---HHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 357 LEFTL---YDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 357 l~~~L---~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
....+ .++...+++|..++-. ........+.+.+.+.+.|...+.
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~--st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDM--STVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEEC--SCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEeC--CCCCHHHHHHHHHHHHHhCCEEEE
Confidence 55666 7777889988765432 111222334566667777776554
No 445
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=37.70 E-value=1.9e+02 Score=29.46 Aligned_cols=86 Identities=13% Similarity=0.145 Sum_probs=51.2
Q ss_pred EEEEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHh-----------cCCee----------E-EEcccccCCCC
Q 043503 280 GLDIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIAS-----------RGLIS----------M-HISVSQRLPFF 335 (430)
Q Consensus 280 VLDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~-----------rg~i~----------~-~~~d~~~lpf~ 335 (430)
|-=||+|+ +.++..+++.|.+|+.. |.++..++.+.+ +|.+. + ...+.+.+
T Consensus 8 VgVIGaG~MG~~IA~~la~aG~~V~l~--D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~--- 82 (483)
T 3mog_A 8 VAVIGSGTMGAGIAEVAASHGHQVLLY--DISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL--- 82 (483)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE--CSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG---
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEE--ECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh---
Confidence 35578876 35677777779999988 556665555433 33321 1 12222221
Q ss_pred CCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 336 ENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 336 d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
...|+|+.. +.. +......++.++...++||..+.
T Consensus 83 -~~aDlVIeA-Vpe---~~~vk~~v~~~l~~~~~~~~Ila 117 (483)
T 3mog_A 83 -AAADLVIEA-ASE---RLEVKKALFAQLAEVCPPQTLLT 117 (483)
T ss_dssp -GGCSEEEEC-CCC---CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -cCCCEEEEc-CCC---cHHHHHHHHHHHHHhhccCcEEE
Confidence 347999884 111 11124578889999999988774
No 446
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=37.68 E-value=1.4e+02 Score=28.10 Aligned_cols=113 Identities=10% Similarity=0.040 Sum_probs=61.3
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCC-EEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCch
Q 043503 279 IGLDIGGGT-G-TFAARMRERNV-TIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDS 355 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~-~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~ 355 (430)
+|-=||+|. | .++..+++.|. +|++.|.+.++...+.+.+.|.. . ..+.... -...|+|+.. ++..
T Consensus 26 ~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~-~-~~~~~e~---~~~aDvVi~~------vp~~ 94 (312)
T 3qsg_A 26 KLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVS-C-KASVAEV---AGECDVIFSL------VTAQ 94 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCE-E-CSCHHHH---HHHCSEEEEC------SCTT
T ss_pred EEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCE-E-eCCHHHH---HhcCCEEEEe------cCch
Confidence 346677764 2 45666666688 89888443224555555665642 1 1111111 1246888884 2222
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHc--CCEEEEE
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRI--GFKKLRW 404 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~--Gfk~l~~ 404 (430)
.....+.++...+++|..++-.. .........+.+.+... |...+.-
T Consensus 95 ~~~~~~~~l~~~l~~~~ivvd~s--t~~~~~~~~~~~~~~~~~~g~~~vd~ 143 (312)
T 3qsg_A 95 AALEVAQQAGPHLCEGALYADFT--SCSPAVKRAIGDVISRHRPSAQYAAV 143 (312)
T ss_dssp THHHHHHHHGGGCCTTCEEEECC--CCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred hHHHHHHhhHhhcCCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCCeEEec
Confidence 24557788889999887554321 11122334455556555 7776654
No 447
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=37.28 E-value=2.5e+02 Score=26.36 Aligned_cols=84 Identities=13% Similarity=0.102 Sum_probs=51.8
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCee------EE-----EcccccCCCCCCceeEEEEcc
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLIS------MH-----ISVSQRLPFFENTLDIVHSMH 346 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~------~~-----~~d~~~lpf~d~sfDlV~~~~ 346 (430)
|.=||+|. | .++..|++.|.+|+.+ . .+...+.++++|... +. ..+.+. -..+|+|+..
T Consensus 22 I~IiGaGa~G~~~a~~L~~~G~~V~l~-~--~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~D~vila- 93 (318)
T 3hwr_A 22 VAIMGAGAVGCYYGGMLARAGHEVILI-A--RPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA----VQGADLVLFC- 93 (318)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEEE-C--CHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG----GTTCSEEEEC-
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEE-E--cHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH----cCCCCEEEEE-
Confidence 47788875 3 5677777778888766 3 355566666665411 00 011111 1468998884
Q ss_pred chhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 347 VLSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 347 ~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
++......++.++...++|+..++.
T Consensus 94 -----vk~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 94 -----VKSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp -----CCGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred -----cccccHHHHHHHHHHhcCCCCEEEE
Confidence 2222477889999999998876654
No 448
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=36.86 E-value=1.1e+02 Score=28.84 Aligned_cols=84 Identities=15% Similarity=0.116 Sum_probs=47.9
Q ss_pred EEEEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCC-ee------EE------EcccccCCCCCCceeEEEE
Q 043503 280 GLDIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIASRGL-IS------MH------ISVSQRLPFFENTLDIVHS 344 (430)
Q Consensus 280 VLDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~-i~------~~------~~d~~~lpf~d~sfDlV~~ 344 (430)
|.=||+|. +.++..|++.|.+|+.++ .++ .+..+++|+ +. +. ..+.+.. ...+|+|+.
T Consensus 5 I~IiGaGaiG~~~a~~L~~~g~~V~~~~--r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~---~~~~DlVil 77 (320)
T 3i83_A 5 ILVIGTGAIGSFYGALLAKTGHCVSVVS--RSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAEL---ETKPDCTLL 77 (320)
T ss_dssp EEEESCCHHHHHHHHHHHHTTCEEEEEC--STT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGC---SSCCSEEEE
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEe--CCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHc---CCCCCEEEE
Confidence 46678875 256777777788998874 333 255555553 11 10 0111111 136899988
Q ss_pred ccchhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 345 MHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
.--- .....++.++...++|+..++.
T Consensus 78 avK~------~~~~~~l~~l~~~l~~~t~Iv~ 103 (320)
T 3i83_A 78 CIKV------VEGADRVGLLRDAVAPDTGIVL 103 (320)
T ss_dssp CCCC------CTTCCHHHHHTTSCCTTCEEEE
T ss_pred ecCC------CChHHHHHHHHhhcCCCCEEEE
Confidence 4211 1234567788888888876654
No 449
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=36.83 E-value=62 Score=30.46 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=53.0
Q ss_pred cEEEEEcCCcc-H-HHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEE-cccccCCCCCCceeEEEEccchhhcCCc
Q 043503 278 RIGLDIGGGTG-T-FAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHI-SVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 278 r~VLDIGcGtG-~-~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~-~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
++|+=||+|.= . .+..+...|.+|+++| .+....+.+.+.|. ..+. .+...+ -...|+|+..-.. +.+..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d--~~~~~~~~~~~~g~-~~~~~~~l~~~---l~~aDvVi~~~p~-~~i~~ 230 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGA--RSSAHLARITEMGL-VPFHTDELKEH---VKDIDICINTIPS-MILNQ 230 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTC-EEEEGGGHHHH---STTCSEEEECCSS-CCBCH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEE--CCHHHHHHHHHCCC-eEEchhhHHHH---hhCCCEEEECCCh-hhhCH
Confidence 45688887642 2 2333333488999884 44443343334343 2221 122221 1468999985444 33322
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEE
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l 402 (430)
+....++||++++=......+. + + +.....|-..+
T Consensus 231 --------~~~~~mk~g~~lin~a~g~~~~---~-~-~~a~~~G~~~i 265 (300)
T 2rir_A 231 --------TVLSSMTPKTLILDLASRPGGT---D-F-KYAEKQGIKAL 265 (300)
T ss_dssp --------HHHTTSCTTCEEEECSSTTCSB---C-H-HHHHHHTCEEE
T ss_pred --------HHHHhCCCCCEEEEEeCCCCCc---C-H-HHHHHCCCEEE
Confidence 3456789998765432211111 1 2 44556676544
No 450
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=36.53 E-value=67 Score=30.17 Aligned_cols=105 Identities=12% Similarity=0.068 Sum_probs=52.3
Q ss_pred cEEEEEcCCc-cH-HHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEE-cccccCCCCCCceeEEEEccchhhcCCc
Q 043503 278 RIGLDIGGGT-GT-FAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHI-SVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 278 r~VLDIGcGt-G~-~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~-~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
++|+=+|+|. |. .+..+...|.+|+++ |.+....+.+.+.|. .... .+...+ -...|+|+..-.. +.+..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~--dr~~~~~~~~~~~g~-~~~~~~~l~~~---l~~aDvVi~~~p~-~~i~~ 228 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVG--ARESDLLARIAEMGM-EPFHISKAAQE---LRDVDVCINTIPA-LVVTA 228 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHHHTTS-EEEEGGGHHHH---TTTCSEEEECCSS-CCBCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEE--ECCHHHHHHHHHCCC-eecChhhHHHH---hcCCCEEEECCCh-HHhCH
Confidence 4567788764 22 223333348899888 444443444444453 2221 122111 1458999985333 33322
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEE
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKL 402 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l 402 (430)
+....++||++++-......+ . + + +..+..|....
T Consensus 229 --------~~l~~mk~~~~lin~ar~~~~--~-~-~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 229 --------NVLAEMPSHTFVIDLASKPGG--T-D-F-RYAEKRGIKAL 263 (293)
T ss_dssp --------HHHHHSCTTCEEEECSSTTCS--B-C-H-HHHHHHTCEEE
T ss_pred --------HHHHhcCCCCEEEEecCCCCC--C-C-H-HHHHHCCCEEE
Confidence 344568999877653322111 1 1 2 44566675543
No 451
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=36.38 E-value=1e+02 Score=29.37 Aligned_cols=67 Identities=19% Similarity=0.136 Sum_probs=41.6
Q ss_pred EEEEEcC-CccH--HHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcc-cccCCCCCCceeEEEEccch
Q 043503 279 IGLDIGG-GTGT--FAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISV-SQRLPFFENTLDIVHSMHVL 348 (430)
Q Consensus 279 ~VLDIGc-GtG~--~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d-~~~lpf~d~sfDlV~~~~~L 348 (430)
+|.=||- |+|- ++..+.++|++|.+.|....+++.+..++.|. .++.+. ...+ ....+|+|+.+..+
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi-~v~~g~~~~~l--~~~~~d~vV~Spgi 76 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGI-DVYEGFDAAQL--DEFKADVYVIGNVA 76 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTC-EEEESCCGGGG--GSCCCSEEEECTTC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCC-EEECCCCHHHc--CCCCCCEEEECCCc
Confidence 4466665 5554 45566778999999987655556666666665 555542 2222 11358999987665
No 452
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=35.72 E-value=43 Score=31.80 Aligned_cols=111 Identities=13% Similarity=0.075 Sum_probs=57.3
Q ss_pred EEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhHHH
Q 043503 282 DIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLEF 359 (430)
Q Consensus 282 DIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~~ 359 (430)
=||.|. ..++..|++.|++|++. |.++...+...+.|.. ...+...+ -..-|+|++.-.- +.....
T Consensus 10 fIGLG~MG~~mA~~L~~~G~~V~v~--dr~~~~~~~l~~~G~~--~~~s~~e~---~~~~dvvi~~l~~-----~~~~~~ 77 (297)
T 4gbj_A 10 FLGLGNLGTPIAEILLEAGYELVVW--NRTASKAEPLTKLGAT--VVENAIDA---ITPGGIVFSVLAD-----DAAVEE 77 (297)
T ss_dssp EECCSTTHHHHHHHHHHTTCEEEEC---------CTTTTTTCE--ECSSGGGG---CCTTCEEEECCSS-----HHHHHH
T ss_pred EEecHHHHHHHHHHHHHCCCeEEEE--eCCHHHHHHHHHcCCe--EeCCHHHH---HhcCCceeeeccc-----hhhHHH
Confidence 355555 24566666779999987 4444333333333431 11222221 1346888874221 111222
Q ss_pred -HHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEe
Q 043503 360 -TLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNV 406 (430)
Q Consensus 360 -~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~ 406 (430)
+..++...+++|+.++-.. ...+...+.+.+.+.+.|...+.-.+
T Consensus 78 v~~~~~~~~~~~~~iiid~s--T~~p~~~~~~~~~~~~~g~~~ldapV 123 (297)
T 4gbj_A 78 LFSMELVEKLGKDGVHVSMS--TISPETSRQLAQVHEWYGAHYVGAPI 123 (297)
T ss_dssp HSCHHHHHHHCTTCEEEECS--CCCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred HHHHHHHhhcCCCeEEEECC--CCChHHHHHHHHHHHhcCCceecCCc
Confidence 3356778889998665432 12233456677888889988776443
No 453
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=35.26 E-value=2e+02 Score=28.62 Aligned_cols=20 Identities=10% Similarity=0.097 Sum_probs=17.8
Q ss_pred EEEEEcCCccHHHHHHHHcC
Q 043503 279 IGLDIGGGTGTFAARMRERN 298 (430)
Q Consensus 279 ~VLDIGcGtG~~a~~La~~g 298 (430)
+|+|+-||.|.+...+.+.|
T Consensus 12 rvldLFsGiGG~~~Gl~~aG 31 (403)
T 4dkj_A 12 KVFEAFAGIGSQFKALKNIA 31 (403)
T ss_dssp EEEEETCTTCHHHHHHHHHH
T ss_pred eEEEEecCcCHHHHHHHHhC
Confidence 56999999999999988876
No 454
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=34.56 E-value=96 Score=28.40 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=40.2
Q ss_pred cEEEEEcCCccHH--HHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEc
Q 043503 278 RIGLDIGGGTGTF--AARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 278 r~VLDIGcGtG~~--a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
+.||=+|+|.-.. +..|.+.|+.|+.++.+.++...+.+. .+.+.++......-.+ ..+|+|++.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~-~~~i~~i~~~~~~~dL--~~adLVIaA 98 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA-KGQLRVKRKKVGEEDL--LNVFFIVVA 98 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH-TTSCEEECSCCCGGGS--SSCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH-cCCcEEEECCCCHhHh--CCCCEEEEC
Confidence 4459999885432 233445599999888777766555544 4556666554432222 358999984
No 455
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=34.41 E-value=75 Score=30.59 Aligned_cols=83 Identities=17% Similarity=0.165 Sum_probs=49.7
Q ss_pred EEEEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 280 GLDIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 280 VLDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
|.=||+|. +.++..+++.|.+|+..+.+. +...+.+.+.|. ... +.... -...|+|+.. +|....
T Consensus 19 I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~-~~~~~~a~~~G~-~~~--~~~e~---~~~aDvVila------vp~~~~ 85 (338)
T 1np3_A 19 VAIIGYGSQGHAHACNLKDSGVDVTVGLRSG-SATVAKAEAHGL-KVA--DVKTA---VAAADVVMIL------TPDEFQ 85 (338)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECCTT-CHHHHHHHHTTC-EEE--CHHHH---HHTCSEEEEC------SCHHHH
T ss_pred EEEECchHHHHHHHHHHHHCcCEEEEEECCh-HHHHHHHHHCCC-EEc--cHHHH---HhcCCEEEEe------CCcHHH
Confidence 36678876 356666777788888774332 223556666675 222 22111 1246998884 333335
Q ss_pred HHHHH-HHHHhccCCcEEE
Q 043503 358 EFTLY-DIYRLLRPGGIFW 375 (430)
Q Consensus 358 ~~~L~-ei~RvLrPGG~lv 375 (430)
..++. ++...++||..++
T Consensus 86 ~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 86 GRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HHHHHHHTGGGCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 66777 7878888887665
No 456
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=34.32 E-value=2.9e+02 Score=25.97 Aligned_cols=110 Identities=19% Similarity=0.278 Sum_probs=63.4
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc-h
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD-S 355 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d-~ 355 (430)
+|-=||+|. | .++..+++.|.+|++. |.++...+.+.+.|. .+ ..+....- ...|+|+.. +++ .
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~--dr~~~~~~~l~~~g~-~~-~~~~~e~~---~~aDvVi~~------vp~~~ 99 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEAGYALQVW--NRTPARAASLAALGA-TI-HEQARAAA---RDADIVVSM------LENGA 99 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHTTTC-EE-ESSHHHHH---TTCSEEEEC------CSSHH
T ss_pred EEEEECccHHHHHHHHHHHhCCCeEEEE--cCCHHHHHHHHHCCC-Ee-eCCHHHHH---hcCCEEEEE------CCCHH
Confidence 456688875 3 4666777779999988 666666666666664 21 12222211 246888874 222 2
Q ss_pred hHHHHHH--HHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 356 MLEFTLY--DIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 356 ~l~~~L~--ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
....++. ++...+++|..++-.. .......+.+.+.+.+.|...+.
T Consensus 100 ~~~~v~~~~~~~~~l~~~~~vi~~s--t~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 100 VVQDVLFAQGVAAAMKPGSLFLDMA--SITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp HHHHHHTTTCHHHHCCTTCEEEECS--CCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcchhHHhhCCCCCEEEecC--CCCHHHHHHHHHHHHHcCCEEEe
Confidence 3455565 6777788887665432 11122334566667777776554
No 457
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=33.89 E-value=41 Score=32.90 Aligned_cols=84 Identities=13% Similarity=0.087 Sum_probs=49.6
Q ss_pred cEEEEEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEccccc-CCCCCCceeEEEEccchhhcCCc
Q 043503 278 RIGLDIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQR-LPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 278 r~VLDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~-lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
++|.=||+|. |.++..+.+.|.+|++. |.++...+.+.+.|.. . ..+... +.-.....|+|+..- |.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~--dr~~~~~~~a~~~G~~-~-~~~~~e~~~~a~~~aDlVilav------P~ 78 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGY--NRSRSGAKSAVDEGFD-V-SADLEATLQRAAAEDALIVLAV------PM 78 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEE--CSCHHHHHHHHHTTCC-E-ESCHHHHHHHHHHTTCEEEECS------CH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCCe-e-eCCHHHHHHhcccCCCEEEEeC------CH
Confidence 3456788874 35677777779999988 6667777777777751 1 122111 100001258888842 32
Q ss_pred hhHHHHHHHHHHhccCCc
Q 043503 355 SMLEFTLYDIYRLLRPGG 372 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG 372 (430)
.....++.++... +||.
T Consensus 79 ~~~~~vl~~l~~~-~~~~ 95 (341)
T 3ktd_A 79 TAIDSLLDAVHTH-APNN 95 (341)
T ss_dssp HHHHHHHHHHHHH-CTTC
T ss_pred HHHHHHHHHHHcc-CCCC
Confidence 2356677777775 7764
No 458
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=33.68 E-value=2.6e+02 Score=28.04 Aligned_cols=91 Identities=14% Similarity=-0.036 Sum_probs=49.2
Q ss_pred EEEcCCcc--HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEE-------------------EcccccCCCCCCce
Q 043503 281 LDIGGGTG--TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMH-------------------ISVSQRLPFFENTL 339 (430)
Q Consensus 281 LDIGcGtG--~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~-------------------~~d~~~lpf~d~sf 339 (430)
-=||+|.= .++..+++.|.+|+++ |.++...+...+ |...++ ..+.... -...
T Consensus 6 ~VIG~G~vG~~lA~~La~~G~~V~~~--D~~~~~v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea---~~~a 79 (450)
T 3gg2_A 6 AVVGIGYVGLVSATCFAELGANVRCI--DTDRNKIEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQA---VPEA 79 (450)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHH---GGGC
T ss_pred EEECcCHHHHHHHHHHHhcCCEEEEE--ECCHHHHHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHH---HhcC
Confidence 55677652 4566667779999998 555655555444 221111 1111110 1246
Q ss_pred eEEEEccchhh---cC-CchhHHHHHHHHHHhccCCcEEEEe
Q 043503 340 DIVHSMHVLSN---WI-PDSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 340 DlV~~~~~L~~---~~-~d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
|+|+..-.-.. .. +-.....++.++...|++|-.++..
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ 121 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTK 121 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEe
Confidence 88887421100 00 0114677888999999988766553
No 459
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=33.35 E-value=59 Score=31.54 Aligned_cols=69 Identities=19% Similarity=0.110 Sum_probs=40.6
Q ss_pred CceeEEEEccch---hhc-C--Cc--hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEec
Q 043503 337 NTLDIVHSMHVL---SNW-I--PD--SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVG 407 (430)
Q Consensus 337 ~sfDlV~~~~~L---~~~-~--~d--~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~ 407 (430)
+.+|+|++...- .|. . .| ..+..++....++|+|||.|+.-.|-.. ....+.+...+.+ -|+.++....
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga-Dr~se~lv~~LaR-~F~~Vr~vKP 281 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA-DRASESIIGAIAR-QFKFSRVCKP 281 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC-SHHHHHHHHHHHT-TEEEEEEECC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC-cccHHHHHHHHHH-hcceeeeeCC
Confidence 679999994221 111 1 11 1233367788999999999998754422 1133455555554 4777775433
No 460
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.91 E-value=2e+02 Score=26.05 Aligned_cols=100 Identities=16% Similarity=0.118 Sum_probs=54.7
Q ss_pred cEEEEEcCCcc---HHHHHHHHcCCEEEEEecCCC----------hhHHHHH----Hhc-CCeeEEEcccccCC-----C
Q 043503 278 RIGLDIGGGTG---TFAARMRERNVTIITTSLNLD----------GPFNSFI----ASR-GLISMHISVSQRLP-----F 334 (430)
Q Consensus 278 r~VLDIGcGtG---~~a~~La~~g~~Vv~vdiD~s----------~~~le~a----~~r-g~i~~~~~d~~~lp-----f 334 (430)
+++|=.|++.| .++..++++|++|+.+|.+.. ....+.+ ... +.+.++..|..+.. +
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 45688887666 466677777999998865411 2222221 222 34677777765432 0
Q ss_pred C-----CCceeEEEEccchhhc---CCchhHHH-----------HHHHHHHhccCCcEEEEe
Q 043503 335 F-----ENTLDIVHSMHVLSNW---IPDSMLEF-----------TLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 335 ~-----d~sfDlV~~~~~L~~~---~~d~~l~~-----------~L~ei~RvLrPGG~lvl~ 377 (430)
. -+..|+++.+-..... .+.+.++. +++.+.+.++.+|.++..
T Consensus 91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 91 ANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 0 1368998886443221 12222222 334555666778887653
No 461
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=32.78 E-value=1.4e+02 Score=30.80 Aligned_cols=90 Identities=16% Similarity=0.150 Sum_probs=58.4
Q ss_pred cEEEEEcCCccHH--HHHHHHcCCEEEEEecCC-----ChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhh
Q 043503 278 RIGLDIGGGTGTF--AARMRERNVTIITTSLNL-----DGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSN 350 (430)
Q Consensus 278 r~VLDIGcGtG~~--a~~La~~g~~Vv~vdiD~-----s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~ 350 (430)
++|-=||+|+=.. |..|.+.|+.|+.. +-. .....+.|.+.|....-..++- ..-|+|+.
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vg-lr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~------~~ADvV~~------ 104 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYA-LRKEAIAEKRASWRKATENGFKVGTYEELI------PQADLVIN------ 104 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEE-ECHHHHHTTCHHHHHHHHTTCEEEEHHHHG------GGCSEEEE------
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEE-eCCCCcccccchHHHHHHCCCEecCHHHHH------HhCCEEEE------
Confidence 3448899999754 55556668887633 221 1134567777776322222221 24588877
Q ss_pred cCCchhHHHHHHHHHHhccCCcEEEEeecc
Q 043503 351 WIPDSMLEFTLYDIYRLLRPGGIFWLDRFF 380 (430)
Q Consensus 351 ~~~d~~l~~~L~ei~RvLrPGG~lvl~~f~ 380 (430)
.+||+....+..++...|+||-.|.++|=|
T Consensus 105 L~PD~~q~~vy~~I~p~lk~G~~L~faHGF 134 (491)
T 3ulk_A 105 LTPDKQHSDVVRTVQPLMKDGAALGYSHGF 134 (491)
T ss_dssp CSCGGGHHHHHHHHGGGSCTTCEEEESSCH
T ss_pred eCChhhHHHHHHHHHhhCCCCCEEEecCcc
Confidence 267777778889999999999999997643
No 462
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=32.67 E-value=2.4e+02 Score=29.75 Aligned_cols=114 Identities=7% Similarity=0.104 Sum_probs=64.0
Q ss_pred HHHHHHccCCCCCccEEEEEcCCccHHHHHHHHcC--------CEEEEEecCCChhHHH---HHHhc-------------
Q 043503 264 GIDQVLSMKPLGTIRIGLDIGGGTGTFAARMRERN--------VTIITTSLNLDGPFNS---FIASR------------- 319 (430)
Q Consensus 264 ~id~lL~~~p~~~ir~VLDIGcGtG~~a~~La~~g--------~~Vv~vdiD~s~~~le---~a~~r------------- 319 (430)
.+++++........+.|+-+|||.=+.+.++.... ..+.-+++|.-+.+.. ...+.
T Consensus 95 ~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~ 174 (695)
T 2zwa_A 95 RLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDK 174 (695)
T ss_dssp HHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSC
T ss_pred HHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccc
Confidence 34555543311245678999999999999997651 1344455566433221 11110
Q ss_pred -------------CCeeEEEcccccCC----------CCCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 320 -------------GLISMHISVSQRLP----------FFENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 320 -------------g~i~~~~~d~~~lp----------f~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
....++..|+.... +.+...-.++...++-.+++.+....+|..+.+. |+|.+++
T Consensus 175 ~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~ 252 (695)
T 2zwa_A 175 DYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFII 252 (695)
T ss_dssp SSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEE
T ss_pred ccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEE
Confidence 13456666765531 1022233344445554677777788888888864 6777776
Q ss_pred eec
Q 043503 377 DRF 379 (430)
Q Consensus 377 ~~f 379 (430)
.+.
T Consensus 253 ~e~ 255 (695)
T 2zwa_A 253 LEQ 255 (695)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 463
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=32.49 E-value=2.6e+02 Score=25.87 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=25.0
Q ss_pred ccEEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHH
Q 043503 277 IRIGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNS 314 (430)
Q Consensus 277 ir~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le 314 (430)
+++|.=||+|. | .++..+++.|.+|+.+ |.++..++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~--d~~~~~~~ 52 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLV--DQTEDILA 52 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEE--ECCHHHHH
Confidence 34567789887 3 4777778889999988 55554444
No 464
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=32.20 E-value=73 Score=30.30 Aligned_cols=85 Identities=16% Similarity=0.176 Sum_probs=47.8
Q ss_pred EEEEcCCc-c-HHHHHHHHcC----CEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 280 GLDIGGGT-G-TFAARMRERN----VTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g----~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
|.=||+|. | .++..|++.| ..|+..+.+......+.+.+.|.. + ..+.... -...|+|+.. ++
T Consensus 25 I~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~-~-~~~~~e~---~~~aDvVila------v~ 93 (322)
T 2izz_A 25 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVK-L-TPHNKET---VQHSDVLFLA------VK 93 (322)
T ss_dssp EEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCE-E-ESCHHHH---HHHCSEEEEC------SC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCE-E-eCChHHH---hccCCEEEEE------eC
Confidence 36688875 3 4666677777 678877443321134444455642 2 1221111 1247888884 22
Q ss_pred chhHHHHHHHHHHhccCCcEEE
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lv 375 (430)
......++.++...++||..++
T Consensus 94 ~~~~~~vl~~l~~~l~~~~ivv 115 (322)
T 2izz_A 94 PHIIPFILDEIGADIEDRHIVV 115 (322)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHHHHHhhcCCCCEEE
Confidence 3346778888888888776443
No 465
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=32.14 E-value=36 Score=36.03 Aligned_cols=64 Identities=14% Similarity=0.205 Sum_probs=37.2
Q ss_pred CCCCCCceeEEEEcc----chhhcCC--c--hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHH
Q 043503 332 LPFFENTLDIVHSMH----VLSNWIP--D--SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDR 396 (430)
Q Consensus 332 lpf~d~sfDlV~~~~----~L~~~~~--d--~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~ 396 (430)
+| +++.||+|+.+- -.+|+.. | -.+..+-.+..+.|+|||.+++..+--.+..-...+..+.++
T Consensus 216 ~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRk 287 (670)
T 4gua_A 216 FP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARK 287 (670)
T ss_dssp CC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHT
T ss_pred CC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhh
Confidence 44 356899999942 2233321 1 024445667889999999999976553332222334444444
No 466
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=32.12 E-value=1.2e+02 Score=28.44 Aligned_cols=88 Identities=11% Similarity=0.029 Sum_probs=50.2
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCC--ChhHHHHHHhcCC-ee-------EEEcccccCCCCCCceeEEEEccc
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNL--DGPFNSFIASRGL-IS-------MHISVSQRLPFFENTLDIVHSMHV 347 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~--s~~~le~a~~rg~-i~-------~~~~d~~~lpf~d~sfDlV~~~~~ 347 (430)
|.=||+|. | .++..+++.|.+|+.+ |. ++...+...+.+. +. +...+.+...-.-...|+|+..-
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~--~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v- 79 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIW--GTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV- 79 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEE--CCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS-
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEE--EccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC-
Confidence 35678875 3 4566666679999888 55 5666666666553 10 11111001100013579988842
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
+......++.++.. ++||..++.
T Consensus 80 -----~~~~~~~v~~~i~~-l~~~~~vv~ 102 (335)
T 1txg_A 80 -----STDGVLPVMSRILP-YLKDQYIVL 102 (335)
T ss_dssp -----CGGGHHHHHHHHTT-TCCSCEEEE
T ss_pred -----ChHHHHHHHHHHhc-CCCCCEEEE
Confidence 22236778888888 888876543
No 467
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=31.98 E-value=1.6e+02 Score=29.80 Aligned_cols=113 Identities=14% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCccEEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhc-------------------CCeeEEEccc-ccC
Q 043503 275 GTIRIGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASR-------------------GLISMHISVS-QRL 332 (430)
Q Consensus 275 ~~ir~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r-------------------g~i~~~~~d~-~~l 332 (430)
+++|+ -=||.|. | .++..+++.|.+|+++|.| +...+...+. |.+.+ ..|. +.+
T Consensus 7 ~~~~~-~vIGlG~vG~~~A~~La~~G~~V~~~D~~--~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~ 82 (446)
T 4a7p_A 7 GSVRI-AMIGTGYVGLVSGACFSDFGHEVVCVDKD--ARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV 82 (446)
T ss_dssp CCCEE-EEECCSHHHHHHHHHHHHTTCEEEEECSC--STTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH
T ss_pred CceEE-EEEcCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH
Confidence 45554 4466664 2 3566667779999999665 4334443332 11111 1111 111
Q ss_pred CCCCCceeEEEEccchh----hcCCc-hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHc
Q 043503 333 PFFENTLDIVHSMHVLS----NWIPD-SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRI 397 (430)
Q Consensus 333 pf~d~sfDlV~~~~~L~----~~~~d-~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~ 397 (430)
...|+|+..-... +-.+| ...+..+..+.+.|++|-.++...- -.....+.+.+.+.+.
T Consensus 83 ----~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST--v~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 83 ----KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKST--VPVGTGDEVERIIAEV 146 (446)
T ss_dssp ----TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC--CCTTHHHHHHHHHHHH
T ss_pred ----hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC--CCchHHHHHHHHHHHh
Confidence 2468888741110 00111 1367788889999999887766431 2223345555556554
No 468
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=31.72 E-value=1.3e+02 Score=28.25 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=33.0
Q ss_pred EEEEcCCc-cH-HHHHHHHc-CCEEEEEecCCChhHHHHHHhc-CCeeEEEcccccCCCCCCceeEEEEc
Q 043503 280 GLDIGGGT-GT-FAARMRER-NVTIITTSLNLDGPFNSFIASR-GLISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 280 VLDIGcGt-G~-~a~~La~~-g~~Vv~vdiD~s~~~le~a~~r-g~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
|.=||||. |. ++..+.+. +++++++ .|.++...+...++ |. . ..+.+.+- .+...|+|+..
T Consensus 6 vgiiG~G~~g~~~~~~l~~~~~~~l~av-~d~~~~~~~~~~~~~~~-~--~~~~~~~l-~~~~~D~V~i~ 70 (331)
T 4hkt_A 6 FGLLGAGRIGKVHAKAVSGNADARLVAV-ADAFPAAAEAIAGAYGC-E--VRTIDAIE-AAADIDAVVIC 70 (331)
T ss_dssp EEEECCSHHHHHHHHHHHHCTTEEEEEE-ECSSHHHHHHHHHHTTC-E--ECCHHHHH-HCTTCCEEEEC
T ss_pred EEEECCCHHHHHHHHHHhhCCCcEEEEE-ECCCHHHHHHHHHHhCC-C--cCCHHHHh-cCCCCCEEEEe
Confidence 35588876 32 34444444 7788765 46666554444333 44 3 33333321 23468998874
No 469
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=31.28 E-value=18 Score=35.39 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=48.3
Q ss_pred cEEEEEcCCc-cHHHHHHHH-cCCEEEEEecCCChhHHHHHHhcCC--eeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGGT-GTFAARMRE-RNVTIITTSLNLDGPFNSFIASRGL--ISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~-~g~~Vv~vdiD~s~~~le~a~~rg~--i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
.+|+=+|+|. |..++.++. .|++|+.+ |.++.-.+.+++.+. +.....+...+.-.-..+|+|+..-.... .+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~--dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~-~~ 244 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIF--DINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPG-RR 244 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTT-SS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEE--eCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCC-CC
Confidence 4568888754 344444444 38888888 555555555544322 22221111111100125899987533311 10
Q ss_pred chhHHHHHHHHHHhccCCcEEEEe
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~ 377 (430)
. ...+..++.+.++|||.++..
T Consensus 245 ~--~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 245 A--PILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp C--CCCBCHHHHTTSCTTCEEEET
T ss_pred C--CeecCHHHHhhCCCCCEEEEE
Confidence 0 001134566789999987754
No 470
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=30.86 E-value=1.2e+02 Score=27.96 Aligned_cols=68 Identities=13% Similarity=0.077 Sum_probs=42.9
Q ss_pred cEEEEEcCCcc---HHHHHHHHcCCEEEEEecCCChhHHHHHHh-cCCeeEEEcccccCC-----C-----CCCceeEEE
Q 043503 278 RIGLDIGGGTG---TFAARMRERNVTIITTSLNLDGPFNSFIAS-RGLISMHISVSQRLP-----F-----FENTLDIVH 343 (430)
Q Consensus 278 r~VLDIGcGtG---~~a~~La~~g~~Vv~vdiD~s~~~le~a~~-rg~i~~~~~d~~~lp-----f-----~d~sfDlV~ 343 (430)
|+||=-|++.| ..+..+++.|++|+.+|.+ +...+...+ .+.+.++..|..+.. + .-+..|+++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID--EKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 45677788777 4677778889999998554 544444433 344666777764422 0 014689988
Q ss_pred Eccc
Q 043503 344 SMHV 347 (430)
Q Consensus 344 ~~~~ 347 (430)
.+-.
T Consensus 81 NNAG 84 (247)
T 3ged_A 81 NNAC 84 (247)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8543
No 471
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=30.71 E-value=1.1e+02 Score=29.16 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=59.7
Q ss_pred EEEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhHH
Q 043503 281 LDIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSMLE 358 (430)
Q Consensus 281 LDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l~ 358 (430)
==||.|. ..++..|.+.|+.|++. |.++...+...+.|.. ...+...+ -...|+|+++-. ++...+
T Consensus 7 gfIGlG~MG~~mA~~L~~~G~~v~v~--dr~~~~~~~l~~~Ga~--~a~s~~e~---~~~~dvv~~~l~-----~~~~v~ 74 (300)
T 3obb_A 7 AFIGLGHMGAPMATNLLKAGYLLNVF--DLVQSAVDGLVAAGAS--AARSARDA---VQGADVVISMLP-----ASQHVE 74 (300)
T ss_dssp EEECCSTTHHHHHHHHHHTTCEEEEE--CSSHHHHHHHHHTTCE--ECSSHHHH---HTTCSEEEECCS-----CHHHHH
T ss_pred EEeeehHHHHHHHHHHHhCCCeEEEE--cCCHHHHHHHHHcCCE--EcCCHHHH---HhcCCceeecCC-----chHHHH
Confidence 3355555 24666667779999988 6666666666666641 11111111 135788888422 222234
Q ss_pred HHHHH---HHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEE
Q 043503 359 FTLYD---IYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 359 ~~L~e---i~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~ 404 (430)
.++.. +...++||.. +++. ....++..+.+.+.+.+.|...+.-
T Consensus 75 ~V~~~~~g~~~~~~~g~i-iId~-sT~~p~~~~~~a~~~~~~G~~~lDa 121 (300)
T 3obb_A 75 GLYLDDDGLLAHIAPGTL-VLEC-STIAPTSARKIHAAARERGLAMLDA 121 (300)
T ss_dssp HHHHSSSSSTTSCCC-CE-EEEC-SCCCHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHhchhhhhhcCCCCCE-EEEC-CCCCHHHHHHHHHHHHHcCCEEEec
Confidence 44433 3445666654 4432 1122334566778888889887753
No 472
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=30.48 E-value=1.5e+02 Score=28.28 Aligned_cols=62 Identities=11% Similarity=-0.105 Sum_probs=34.1
Q ss_pred EEEEcCCc-cH--HHHHHHHc-CCEEEEEecCCChhHHH-HHHhcCCeeEEEcccccCCCCCCceeEEEEc
Q 043503 280 GLDIGGGT-GT--FAARMRER-NVTIITTSLNLDGPFNS-FIASRGLISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 280 VLDIGcGt-G~--~a~~La~~-g~~Vv~vdiD~s~~~le-~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
|.=||||. |. ++..+.+. +++++++ .|.++...+ ++++.|.. .+ .+.+.+- .+...|+|+..
T Consensus 30 igiIG~G~~g~~~~~~~l~~~~~~~l~av-~d~~~~~~~~~a~~~g~~-~~-~~~~~ll-~~~~~D~V~i~ 96 (350)
T 3rc1_A 30 VGVIGCADIAWRRALPALEAEPLTEVTAI-ASRRWDRAKRFTERFGGE-PV-EGYPALL-ERDDVDAVYVP 96 (350)
T ss_dssp EEEESCCHHHHHTHHHHHHHCTTEEEEEE-EESSHHHHHHHHHHHCSE-EE-ESHHHHH-TCTTCSEEEEC
T ss_pred EEEEcCcHHHHHHHHHHHHhCCCeEEEEE-EcCCHHHHHHHHHHcCCC-Cc-CCHHHHh-cCCCCCEEEEC
Confidence 46688874 33 34455555 7787765 355554443 34444653 33 4444332 34568998874
No 473
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=30.22 E-value=1.5e+02 Score=28.45 Aligned_cols=91 Identities=9% Similarity=0.036 Sum_probs=52.1
Q ss_pred cEEEEEcCC-ccHHHHHHHH-c-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccc---cC-CCC-CCceeEEEEccchh
Q 043503 278 RIGLDIGGG-TGTFAARMRE-R-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQ---RL-PFF-ENTLDIVHSMHVLS 349 (430)
Q Consensus 278 r~VLDIGcG-tG~~a~~La~-~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~---~l-pf~-d~sfDlV~~~~~L~ 349 (430)
.+||=+|+| .|.++..+++ . |++|+++ +.++.-.+.+++-|.-.++..... .+ ... ...+|+|+..-.-.
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvid~~G~~ 265 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVMTPATVIAL--DVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQ 265 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEE--ESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEE--eCCHHHHHHHHHhCCCEEEeccchHHHHHHHHhCCCCCcEEEECCCCc
Confidence 345777764 3566666665 4 8898888 556777788877775333322111 00 011 23699999742211
Q ss_pred hcCCchhHHHHHHHHHHhccCCcEEEEeec
Q 043503 350 NWIPDSMLEFTLYDIYRLLRPGGIFWLDRF 379 (430)
Q Consensus 350 ~~~~d~~l~~~L~ei~RvLrPGG~lvl~~f 379 (430)
....+....++ +||.+++...
T Consensus 266 -------~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 266 -------ATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp -------HHHHHGGGGEE--EEEEEEECCC
T ss_pred -------hHHHHHHHhhc--CCCEEEEEeC
Confidence 00134455555 9999887653
No 474
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=29.96 E-value=1.9e+02 Score=26.90 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=19.4
Q ss_pred EEEEc-CCc--cHHHHHHHHcCCEEEEEecCC
Q 043503 280 GLDIG-GGT--GTFAARMRERNVTIITTSLNL 308 (430)
Q Consensus 280 VLDIG-cGt--G~~a~~La~~g~~Vv~vdiD~ 308 (430)
|.=|| +|. +.++..+++.|.+|+.+|.+.
T Consensus 24 I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 24 IVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 46677 775 356666666688888885543
No 475
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=29.94 E-value=2.7e+02 Score=28.20 Aligned_cols=94 Identities=15% Similarity=0.080 Sum_probs=52.7
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEccc----------ccCCCCC------CceeE
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVS----------QRLPFFE------NTLDI 341 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~----------~~lpf~d------~sfDl 341 (430)
|-=||+|. | .++..+++.|.+|+++ |.++..++...+.+. .++.... .++.+.. ...|+
T Consensus 11 I~VIG~G~vG~~lA~~la~~G~~V~~~--d~~~~~v~~l~~~~~-~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 11 LTIIGSGSVGLVTGACLADIGHDVFCL--DVDQAKIDILNNGGV-PIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHTTCC-SSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred EEEECcCHHHHHHHHHHHhCCCEEEEE--ECCHHHHHHHHCCCC-CcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 36678885 3 4677778889999998 555666666655432 1111000 0111110 24688
Q ss_pred EEEccch----hhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 342 VHSMHVL----SNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 342 V~~~~~L----~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
|+..-.- ..-.+-.....++.++...|+||-.++.
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~ 126 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD 126 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE
Confidence 8874111 0000113577788889999999876654
No 476
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=29.75 E-value=66 Score=29.85 Aligned_cols=108 Identities=14% Similarity=0.074 Sum_probs=59.1
Q ss_pred EEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc-hhH
Q 043503 281 LDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD-SML 357 (430)
Q Consensus 281 LDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d-~~l 357 (430)
-=||+|. | .++..+++.|.+|++. |.++...+.+.+.|.. + ..+....- ...|+|+.. +++ ...
T Consensus 5 ~iiG~G~mG~~~a~~l~~~G~~V~~~--dr~~~~~~~~~~~g~~-~-~~~~~~~~---~~advvi~~------v~~~~~~ 71 (287)
T 3pdu_A 5 GFLGLGIMGGPMAANLVRAGFDVTVW--NRNPAKCAPLVALGAR-Q-ASSPAEVC---AACDITIAM------LADPAAA 71 (287)
T ss_dssp EEECCSTTHHHHHHHHHHHTCCEEEE--CSSGGGGHHHHHHTCE-E-CSCHHHHH---HHCSEEEEC------CSSHHHH
T ss_pred EEEccCHHHHHHHHHHHHCCCeEEEE--cCCHHHHHHHHHCCCe-e-cCCHHHHH---HcCCEEEEE------cCCHHHH
Confidence 4567765 2 4666677779999888 5555555555555541 1 11211110 236888874 222 134
Q ss_pred HHHH---HHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 358 EFTL---YDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 358 ~~~L---~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
..++ .++...+++|..++-.. .......+.+.+.+.+.|...+.
T Consensus 72 ~~v~~~~~~l~~~l~~g~~vv~~s--t~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 72 REVCFGANGVLEGIGGGRGYIDMS--TVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp HHHHHSTTCGGGTCCTTCEEEECS--CCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCchhhhhcccCCCEEEECC--CCCHHHHHHHHHHHHHcCCEEEE
Confidence 5556 56667788877654321 11122334566667777876554
No 477
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=29.51 E-value=1e+02 Score=29.11 Aligned_cols=110 Identities=8% Similarity=0.006 Sum_probs=60.2
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc-h
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD-S 355 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d-~ 355 (430)
+|-=||+|. | .++..+++.|.+|++. |.++...+.+.+.|.. + ..+.... -...|+|+.. +++ .
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~G~~V~~~--dr~~~~~~~l~~~g~~-~-~~~~~~~---~~~aDvvi~~------vp~~~ 89 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKNGFKVTVW--NRTLSKCDELVEHGAS-V-CESPAEV---IKKCKYTIAM------LSDPC 89 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE--CSSGGGGHHHHHTTCE-E-CSSHHHH---HHHCSEEEEC------CSSHH
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEE--eCCHHHHHHHHHCCCe-E-cCCHHHH---HHhCCEEEEE------cCCHH
Confidence 346678775 2 4666667779999988 5555555555555541 1 1111111 1236888874 222 1
Q ss_pred hHHHHH---HHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEE
Q 043503 356 MLEFTL---YDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 356 ~l~~~L---~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~ 403 (430)
....++ .++...+++|..++-.. .......+.+.+.+.+.|...+.
T Consensus 90 ~~~~v~~~~~~l~~~l~~g~~vv~~s--t~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 90 AALSVVFDKGGVLEQICEGKGYIDMS--TVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp HHHHHHHSTTCGGGGCCTTCEEEECS--CCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhCchhhhhccCCCCEEEECC--CCCHHHHHHHHHHHHHcCCEEEe
Confidence 244555 56667788877654421 11122334566667777776554
No 478
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=29.17 E-value=2.3e+02 Score=26.66 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=34.0
Q ss_pred EEEEEcCCc-cH-HHHHHH-Hc-CCEEEEEecCCChhHHHHHHh-cCCeeEEEcccccCCCCCCceeEEEEc
Q 043503 279 IGLDIGGGT-GT-FAARMR-ER-NVTIITTSLNLDGPFNSFIAS-RGLISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 279 ~VLDIGcGt-G~-~a~~La-~~-g~~Vv~vdiD~s~~~le~a~~-rg~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
+|.=||||. |. ++..+. +. +++++++ .|.++...+...+ .|....+ .+.+.+ +.+...|+|+..
T Consensus 10 ~v~iiG~G~ig~~~~~~l~~~~~~~~~vav-~d~~~~~~~~~a~~~g~~~~~-~~~~~~-l~~~~~D~V~i~ 78 (346)
T 3cea_A 10 RAAIIGLGRLGERHARHLVNKIQGVKLVAA-CALDSNQLEWAKNELGVETTY-TNYKDM-IDTENIDAIFIV 78 (346)
T ss_dssp EEEEECCSTTHHHHHHHHHHTCSSEEEEEE-ECSCHHHHHHHHHTTCCSEEE-SCHHHH-HTTSCCSEEEEC
T ss_pred eEEEEcCCHHHHHHHHHHHhcCCCcEEEEE-ecCCHHHHHHHHHHhCCCccc-CCHHHH-hcCCCCCEEEEe
Confidence 447789985 43 344444 33 6777665 3666655544333 3542322 333332 123468998874
No 479
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=28.59 E-value=37 Score=37.10 Aligned_cols=84 Identities=17% Similarity=0.076 Sum_probs=49.2
Q ss_pred EEEEEc--CCccHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC--------CCCCceeEEEEccc
Q 043503 279 IGLDIG--GGTGTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP--------FFENTLDIVHSMHV 347 (430)
Q Consensus 279 ~VLDIG--cGtG~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp--------f~d~sfDlV~~~~~ 347 (430)
+||=.| +|.|..++.+++. |++|++++ .++ -.+..+ -|.-.++ +..... .....+|+|+.+-.
T Consensus 348 ~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~--~~~-k~~~l~-lga~~v~--~~~~~~~~~~i~~~t~g~GvDvVld~~g 421 (795)
T 3slk_A 348 SLLVHSAAGGVGMAAIQLARHLGAEVYATA--SED-KWQAVE-LSREHLA--SSRTCDFEQQFLGATGGRGVDVVLNSLA 421 (795)
T ss_dssp CEEEESTTBHHHHHHHHHHHHTTCCEEEEC--CGG-GGGGSC-SCGGGEE--CSSSSTHHHHHHHHSCSSCCSEEEECCC
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCEEEEEe--ChH-Hhhhhh-cChhhee--ecCChhHHHHHHHHcCCCCeEEEEECCC
Confidence 458887 4678899988887 99998873 222 111111 1211111 111111 12346999998421
Q ss_pred hhhcCCchhHHHHHHHHHHhccCCcEEEEee
Q 043503 348 LSNWIPDSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 348 L~~~~~d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
. ..+....++|+|||.|+...
T Consensus 422 -----g-----~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 422 -----G-----EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp -----T-----TTTHHHHTSCTTCEEEEECC
T ss_pred -----c-----HHHHHHHHHhcCCCEEEEec
Confidence 1 13567889999999998754
No 480
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=28.08 E-value=88 Score=32.12 Aligned_cols=83 Identities=16% Similarity=0.092 Sum_probs=44.8
Q ss_pred cEEEEEcCCccHHHHHHHH----cCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGGTGTFAARMRE----RNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~----~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
++|+=+|+|. .+..+++ .|.+|+.+|.| +.....+...|. .+ .+.+.+ -...|+|+..-...+.+.
T Consensus 248 KTVgVIG~G~--IGr~vA~~lrafGa~Viv~d~d--p~~a~~A~~~G~-~v--v~LeEl---L~~ADIVv~atgt~~lI~ 317 (464)
T 3n58_A 248 KVAVVCGYGD--VGKGSAQSLAGAGARVKVTEVD--PICALQAAMDGF-EV--VTLDDA---ASTADIVVTTTGNKDVIT 317 (464)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSS--HHHHHHHHHTTC-EE--CCHHHH---GGGCSEEEECCSSSSSBC
T ss_pred CEEEEECcCH--HHHHHHHHHHHCCCEEEEEeCC--cchhhHHHhcCc-ee--ccHHHH---HhhCCEEEECCCCccccC
Confidence 3457777664 4333333 39999998554 432333444443 22 222221 125788887432223222
Q ss_pred chhHHHHHHHHHHhccCCcEEEEee
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
.+....+|||++++-..
T Consensus 318 --------~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 318 --------IDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp --------HHHHHHSCTTEEEEECS
T ss_pred --------HHHHhcCCCCeEEEEcC
Confidence 36677899999887654
No 481
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=28.02 E-value=82 Score=32.07 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=43.5
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchh
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSM 356 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~ 356 (430)
+|.=+|.|. | ..+..+...|.+|+++| .++.....+...|. . ..+.+.+ -...|+|+....-.+.+..
T Consensus 213 tVgIiG~G~IG~~vA~~Lka~Ga~Viv~D--~~p~~a~~A~~~G~-~--~~sL~ea---l~~ADVVilt~gt~~iI~~-- 282 (436)
T 3h9u_A 213 TACVCGYGDVGKGCAAALRGFGARVVVTE--VDPINALQAAMEGY-Q--VLLVEDV---VEEAHIFVTTTGNDDIITS-- 282 (436)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC--SCHHHHHHHHHTTC-E--ECCHHHH---TTTCSEEEECSSCSCSBCT--
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEEC--CChhhhHHHHHhCC-e--ecCHHHH---HhhCCEEEECCCCcCccCH--
Confidence 446666554 2 23333333499999984 44544444555554 1 1222221 1347888874433333332
Q ss_pred HHHHHHHHHHhccCCcEEEEe
Q 043503 357 LEFTLYDIYRLLRPGGIFWLD 377 (430)
Q Consensus 357 l~~~L~ei~RvLrPGG~lvl~ 377 (430)
+..+.+|||.+++=.
T Consensus 283 ------e~l~~MK~gAIVINv 297 (436)
T 3h9u_A 283 ------EHFPRMRDDAIVCNI 297 (436)
T ss_dssp ------TTGGGCCTTEEEEEC
T ss_pred ------HHHhhcCCCcEEEEe
Confidence 456678999876543
No 482
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=27.94 E-value=95 Score=29.57 Aligned_cols=83 Identities=19% Similarity=0.183 Sum_probs=49.6
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEE------------cccccCCCCCCceeEEEEc
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHI------------SVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~------------~d~~~lpf~d~sfDlV~~~ 345 (430)
|.=||+|. | .++..|++.|..|+.++ .. ...+.+++.|.. +.. .+.+. -..+|+|+..
T Consensus 6 I~IiGaG~~G~~~a~~L~~~g~~V~~~~--r~-~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~----~~~~D~Vila 77 (335)
T 3ghy_A 6 ICIVGAGAVGGYLGARLALAGEAINVLA--RG-ATLQALQTAGLR-LTEDGATHTLPVRATHDAAA----LGEQDVVIVA 77 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHTTCCEEEEC--CH-HHHHHHHHTCEE-EEETTEEEEECCEEESCHHH----HCCCSEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCEEEEEE--Ch-HHHHHHHHCCCE-EecCCCeEEEeeeEECCHHH----cCCCCEEEEe
Confidence 47788875 2 46677777788888874 32 344555555541 111 11111 1458998874
Q ss_pred cchhhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 346 HVLSNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 346 ~~L~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
++......++.++...++|+..++.
T Consensus 78 ------vk~~~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 78 ------VKAPALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp ------CCHHHHHHHHGGGSSSCCTTCEEEE
T ss_pred ------CCchhHHHHHHHHHhhCCCCCEEEE
Confidence 2222366777788788888876654
No 483
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=27.89 E-value=3.5e+02 Score=25.81 Aligned_cols=62 Identities=8% Similarity=0.114 Sum_probs=34.8
Q ss_pred EEEcCCccHH---HHHHHHcCCEEEEEecCCChhHHH-HHHhcCCeeEEEcccccCCCCCCceeEEEEc
Q 043503 281 LDIGGGTGTF---AARMRERNVTIITTSLNLDGPFNS-FIASRGLISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 281 LDIGcGtG~~---a~~La~~g~~Vv~vdiD~s~~~le-~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
-=||||.... ...+...+++++++ .|.++...+ .+++.|....+ .+.+.+ +.+...|+|+..
T Consensus 30 giiG~G~~~~~~~~~~~~~~~~~lvav-~d~~~~~a~~~a~~~~~~~~~-~~~~~l-l~~~~vD~V~I~ 95 (361)
T 3u3x_A 30 AAVGLNHNHIYGQVNCLLRAGARLAGF-HEKDDALAAEFSAVYADARRI-ATAEEI-LEDENIGLIVSA 95 (361)
T ss_dssp EEECCCSTTHHHHHHHHHHTTCEEEEE-ECSCHHHHHHHHHHSSSCCEE-SCHHHH-HTCTTCCEEEEC
T ss_pred EEECcCHHHHHHHHHHhhcCCcEEEEE-EcCCHHHHHHHHHHcCCCccc-CCHHHH-hcCCCCCEEEEe
Confidence 6689997542 33333448898876 476665544 44444543333 333332 234568998873
No 484
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=27.82 E-value=2.6e+02 Score=24.93 Aligned_cols=101 Identities=10% Similarity=-0.010 Sum_probs=54.6
Q ss_pred cEEEEEcCC--c--c-HHHHHHHHcCCEEEEEecCCCh-hHH-HHHHhcC--CeeEEEcccccCC-----CC-----CCc
Q 043503 278 RIGLDIGGG--T--G-TFAARMRERNVTIITTSLNLDG-PFN-SFIASRG--LISMHISVSQRLP-----FF-----ENT 338 (430)
Q Consensus 278 r~VLDIGcG--t--G-~~a~~La~~g~~Vv~vdiD~s~-~~l-e~a~~rg--~i~~~~~d~~~lp-----f~-----d~s 338 (430)
+++|=.|++ . | .++..++++|++|+.++-+... ... +...+.+ .+.++..|..+.. +. -+.
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV 87 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 456888865 3 3 3677788889999988544211 111 2222222 4677777765432 00 136
Q ss_pred eeEEEEccchhh-------c--CCchhHH-----------HHHHHHHHhccCCcEEEEee
Q 043503 339 LDIVHSMHVLSN-------W--IPDSMLE-----------FTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 339 fDlV~~~~~L~~-------~--~~d~~l~-----------~~L~ei~RvLrPGG~lvl~~ 378 (430)
.|+++.+-.... + .+.+... .+++.+...++++|.++...
T Consensus 88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 898887543321 0 1111122 24455666777788877643
No 485
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=27.60 E-value=2.5e+02 Score=28.65 Aligned_cols=115 Identities=9% Similarity=-0.046 Sum_probs=61.4
Q ss_pred EEEcCCcc--HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCC--eeEE-EcccccCCCCCCceeEEEEccchhhcCCc-
Q 043503 281 LDIGGGTG--TFAARMRERNVTIITTSLNLDGPFNSFIASRGL--ISMH-ISVSQRLPFFENTLDIVHSMHVLSNWIPD- 354 (430)
Q Consensus 281 LDIGcGtG--~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~--i~~~-~~d~~~lpf~d~sfDlV~~~~~L~~~~~d- 354 (430)
-=||+|.= .++..+++.|.+|++. |.++...+.+.+.+. ..+. ..+.+.+--.-...|+|+.. ++.
T Consensus 8 giIGlG~MG~~lA~~L~~~G~~V~v~--dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~------Vp~~ 79 (484)
T 4gwg_A 8 ALIGLAVMGQNLILNMNDHGFVVCAF--NRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILL------VKAG 79 (484)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEE--CSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEEC------SCSS
T ss_pred EEEChhHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEe------cCCh
Confidence 44666642 4556666679999988 555555555554432 1111 12222111000136888873 232
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEE
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWN 405 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~ 405 (430)
...+.++.++...|+||..++-.. ...........+.+...|...+...
T Consensus 80 ~~v~~vl~~l~~~L~~g~iIId~s--t~~~~~t~~~~~~l~~~Gi~fvd~p 128 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIIIDGG--NSEYRDTTRRCRDLKAKGILFVGSG 128 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECS--CCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcC--CCCchHHHHHHHHHHhhccccccCC
Confidence 246778889999999887554321 1111122345556677787766543
No 486
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=27.55 E-value=32 Score=33.98 Aligned_cols=96 Identities=17% Similarity=0.129 Sum_probs=48.2
Q ss_pred cEEEEEcCCc-cHHHHHHHH-cCCEEEEEecCCChhHHHHHHhc-CC-eeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGGT-GTFAARMRE-RNVTIITTSLNLDGPFNSFIASR-GL-ISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~-~g~~Vv~vdiD~s~~~le~a~~r-g~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
++|+=+|+|. |..++.++. .|.+|+++ |.++...+.+.+. |. +.....+...+.-.-...|+|+..-.... ..
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~--d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~-~~ 245 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVL--DINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG-AK 245 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT-SC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEE--eCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC-CC
Confidence 4568888754 333333333 38899988 5555555555542 33 21211111111100125799988422211 10
Q ss_pred chhHHHHHHHHHHhccCCcEEEEee
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
. ...+..++.+.+||||.++...
T Consensus 246 t--~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 246 A--PKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp C--CCCBCHHHHTTSCTTCEEEEGG
T ss_pred C--cceecHHHHhcCCCCcEEEEEe
Confidence 0 1112456778899999887643
No 487
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=27.45 E-value=96 Score=29.21 Aligned_cols=86 Identities=14% Similarity=-0.020 Sum_probs=49.3
Q ss_pred EEEEcCCc--cHHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEE--cccc--cCC-----CCCCceeEEEEccch
Q 043503 280 GLDIGGGT--GTFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHI--SVSQ--RLP-----FFENTLDIVHSMHVL 348 (430)
Q Consensus 280 VLDIGcGt--G~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~--~d~~--~lp-----f~d~sfDlV~~~~~L 348 (430)
|.=||+|. +.++..|++.|..|+.+ +.++ .+..+++|.. +.. ++.. ... -....+|+|+..-
T Consensus 5 I~IiGaGaiG~~~a~~L~~~g~~V~~~--~r~~--~~~i~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~~D~vilav-- 77 (312)
T 3hn2_A 5 IAIVGAGALGLYYGALLQRSGEDVHFL--LRRD--YEAIAGNGLK-VFSINGDFTLPHVKGYRAPEEIGPMDLVLVGL-- 77 (312)
T ss_dssp EEEECCSTTHHHHHHHHHHTSCCEEEE--CSTT--HHHHHHTCEE-EEETTCCEEESCCCEESCHHHHCCCSEEEECC--
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEE--EcCc--HHHHHhCCCE-EEcCCCeEEEeeceeecCHHHcCCCCEEEEec--
Confidence 36678776 35777777778888877 4333 3555666641 111 1110 000 0013689988841
Q ss_pred hhcCCchhHHHHHHHHHHhccCCcEEEE
Q 043503 349 SNWIPDSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 349 ~~~~~d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
+......++.++...++|+..++.
T Consensus 78 ----k~~~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 78 ----KTFANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp ----CGGGGGGHHHHHGGGCCTTCEEEE
T ss_pred ----CCCCcHHHHHHHHhhcCCCCEEEE
Confidence 222245678888888888876654
No 488
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=27.33 E-value=39 Score=33.09 Aligned_cols=96 Identities=14% Similarity=0.180 Sum_probs=47.2
Q ss_pred cEEEEEcCCc-cHHHHHHH-HcCCEEEEEecCCChhHHHHHHhc-CC-eeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGGT-GTFAARMR-ERNVTIITTSLNLDGPFNSFIASR-GL-ISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La-~~g~~Vv~vdiD~s~~~le~a~~r-g~-i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
++|+=+|+|. |..++.++ ..|++|+.+ |.++...+.+.+. |. +.....+...+.-.-..+|+|+..-.....
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~--d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~-- 242 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTIL--DVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA-- 242 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--ESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEE--ECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc--
Confidence 4568888753 33333333 348999988 4455555555442 33 111111111111001258999874332110
Q ss_pred chhHHHHHHHHHHhccCCcEEEEee
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWLDR 378 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl~~ 378 (430)
. ....+..++.+.+||||.++...
T Consensus 243 ~-~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 243 K-APKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC
T ss_pred c-cchhHHHHHHHhhcCCCEEEEEe
Confidence 0 01112457778899999877543
No 489
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=26.81 E-value=1e+02 Score=31.73 Aligned_cols=81 Identities=10% Similarity=0.065 Sum_probs=43.2
Q ss_pred cEEEEEcCCccHHHHHHHHc----CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCC
Q 043503 278 RIGLDIGGGTGTFAARMRER----NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIP 353 (430)
Q Consensus 278 r~VLDIGcGtG~~a~~La~~----g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~ 353 (430)
++|.=+|. |..+..++++ |.+|+++|. +......+...|. . ..+.+.+ -...|+|+..-...+.+.
T Consensus 258 ktVgIIG~--G~IG~~vA~~l~~~G~~Viv~d~--~~~~~~~a~~~g~-~--~~~l~el---l~~aDiVi~~~~t~~lI~ 327 (479)
T 1v8b_A 258 KIVVICGY--GDVGKGCASSMKGLGARVYITEI--DPICAIQAVMEGF-N--VVTLDEI---VDKGDFFITCTGNVDVIK 327 (479)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHHTCEEEEECS--CHHHHHHHHTTTC-E--ECCHHHH---TTTCSEEEECCSSSSSBC
T ss_pred CEEEEEee--CHHHHHHHHHHHhCcCEEEEEeC--ChhhHHHHHHcCC-E--ecCHHHH---HhcCCEEEECCChhhhcC
Confidence 34466665 4444444433 999999844 4433223444444 2 1222221 135799998632222221
Q ss_pred chhHHHHHHHHHHhccCCcEEEE
Q 043503 354 DSMLEFTLYDIYRLLRPGGIFWL 376 (430)
Q Consensus 354 d~~l~~~L~ei~RvLrPGG~lvl 376 (430)
.+....+|||.+++=
T Consensus 328 --------~~~l~~MK~gailiN 342 (479)
T 1v8b_A 328 --------LEHLLKMKNNAVVGN 342 (479)
T ss_dssp --------HHHHTTCCTTCEEEE
T ss_pred --------HHHHhhcCCCcEEEE
Confidence 255677999987764
No 490
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=26.70 E-value=32 Score=34.45 Aligned_cols=92 Identities=17% Similarity=0.122 Sum_probs=50.4
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCCeeEEEcc---------c------------ccCCC
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIASRGLISMHISV---------S------------QRLPF 334 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d---------~------------~~lpf 334 (430)
.+|+=+|+|. |..++.++.. |++|+++ |.++...+.+.+-|. .+...+ . ..+.-
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~--D~~~~~l~~~~~lGa-~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGY--DVRPEVAEQVRSVGA-QWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEE--CSSGGGHHHHHHTTC-EECCCC-------------CHHHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCC-eEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 3568899885 4455555554 9999888 556666666666554 222110 0 01110
Q ss_pred CCCceeEEEEccchhhcCCchhHHHHHHHHHHhccCCcEEE
Q 043503 335 FENTLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 335 ~d~sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
.-...|+|+..-.. ...+. ..-+-.++.+.+|||++++
T Consensus 262 ~l~~aDIVI~tv~i-Pg~~a--p~Lvt~emv~~MkpGsVIV 299 (381)
T 3p2y_A 262 AITKFDIVITTALV-PGRPA--PRLVTAAAATGMQPGSVVV 299 (381)
T ss_dssp HHTTCSEEEECCCC-TTSCC--CCCBCHHHHHTSCTTCEEE
T ss_pred HHhcCCEEEECCCC-CCccc--ceeecHHHHhcCCCCcEEE
Confidence 11468999974211 10000 1112368888999998765
No 491
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=25.99 E-value=54 Score=29.74 Aligned_cols=83 Identities=18% Similarity=0.234 Sum_probs=43.7
Q ss_pred EEEEcCCc-c-HHHHHHHHcCC----EEEEEecCCChhHHHHHHh-cCCeeEEEcccccCCCCCCceeEEEEccchhhcC
Q 043503 280 GLDIGGGT-G-TFAARMRERNV----TIITTSLNLDGPFNSFIAS-RGLISMHISVSQRLPFFENTLDIVHSMHVLSNWI 352 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~----~Vv~vdiD~s~~~le~a~~-rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~ 352 (430)
|.=||+|. | .++..+++.|. +|+.. |.++...+...+ .|.. . ..+.... -...|+|+..-
T Consensus 5 i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~--~r~~~~~~~~~~~~g~~-~-~~~~~e~---~~~aDvVilav------ 71 (247)
T 3gt0_A 5 IGFIGCGNMGMAMIGGMINKNIVSSNQIICS--DLNTANLKNASEKYGLT-T-TTDNNEV---AKNADILILSI------ 71 (247)
T ss_dssp EEEECCSHHHHHHHHHHHHTTSSCGGGEEEE--CSCHHHHHHHHHHHCCE-E-CSCHHHH---HHHCSEEEECS------
T ss_pred EEEECccHHHHHHHHHHHhCCCCCCCeEEEE--eCCHHHHHHHHHHhCCE-E-eCChHHH---HHhCCEEEEEe------
Confidence 35678775 2 46666777787 88877 666655555443 3542 1 1111111 02368877732
Q ss_pred CchhHHHHHHHHHHhccCCcEEE
Q 043503 353 PDSMLEFTLYDIYRLLRPGGIFW 375 (430)
Q Consensus 353 ~d~~l~~~L~ei~RvLrPGG~lv 375 (430)
+......++.++...++||..++
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 72 KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp CTTTHHHHC---CCSSCTTCEEE
T ss_pred CHHHHHHHHHHHHhhcCCCCEEE
Confidence 22235667777777777766544
No 492
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=25.95 E-value=74 Score=30.60 Aligned_cols=86 Identities=12% Similarity=0.174 Sum_probs=48.9
Q ss_pred EEEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCC-------e----eEEE-cccccCCCCCCceeEEEE
Q 043503 279 IGLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGL-------I----SMHI-SVSQRLPFFENTLDIVHS 344 (430)
Q Consensus 279 ~VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~-------i----~~~~-~d~~~lpf~d~sfDlV~~ 344 (430)
+|.=||+|. | .++..|++.|.+|+.+ |.++...+.+.+.+. . .+.. .+.... -...|+|+.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~aDvVil 91 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVW--HMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKA---YNGAEIILF 91 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEE--CSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHH---HTTCSSEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEE--ECCHHHHHHHHHcCcccccccccccccceeeeCCHHHH---HcCCCEEEE
Confidence 347788875 2 4666666668888877 555655555554431 0 0111 111110 124788887
Q ss_pred ccchhhcCCchhHHHHHHH----HHHhccC-CcEEE
Q 043503 345 MHVLSNWIPDSMLEFTLYD----IYRLLRP-GGIFW 375 (430)
Q Consensus 345 ~~~L~~~~~d~~l~~~L~e----i~RvLrP-GG~lv 375 (430)
. ++......++.+ +...++| |..++
T Consensus 92 a------v~~~~~~~v~~~~~~gl~~~l~~~~~ivv 121 (366)
T 1evy_A 92 V------IPTQFLRGFFEKSGGNLIAYAKEKQVPVL 121 (366)
T ss_dssp C------CCHHHHHHHHHHHCHHHHHHHHHHTCCEE
T ss_pred C------CChHHHHHHHHHhHHHHHHhcCccCCEEE
Confidence 4 222346677777 8888888 66544
No 493
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=25.65 E-value=60 Score=32.93 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=37.7
Q ss_pred EEEcCCccHHHHHHHHc----CCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCC----CCCCceeEEEE
Q 043503 281 LDIGGGTGTFAARMRER----NVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLP----FFENTLDIVHS 344 (430)
Q Consensus 281 LDIGcGtG~~a~~La~~----g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lp----f~d~sfDlV~~ 344 (430)
+=+|| |.++..+++. |..|+.+ |.++...+.+.++--+..+.+|+.+.. -.-...|++++
T Consensus 7 iI~G~--G~vG~~la~~L~~~~~~v~vI--d~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 7 IILGA--GQVGGTLAENLVGENNDITIV--DKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEECC--SHHHHHHHHHTCSTTEEEEEE--ESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred EEECC--CHHHHHHHHHHHHCCCCEEEE--ECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 44544 5555555543 7888887 555777777665534577888876533 12346888887
No 494
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=25.56 E-value=3.3e+02 Score=24.85 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=61.2
Q ss_pred EEEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCchhH
Q 043503 280 GLDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPDSML 357 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d~~l 357 (430)
|.=||+|. | .++..+++.|.+|+.+ |.++...+.+.+.|.. . ..+.... -...|+|+..-.. ....
T Consensus 8 i~iiG~G~~G~~~a~~l~~~g~~V~~~--~~~~~~~~~~~~~g~~-~-~~~~~~~---~~~~D~vi~~v~~-----~~~~ 75 (299)
T 1vpd_A 8 VGFIGLGIMGKPMSKNLLKAGYSLVVS--DRNPEAIADVIAAGAE-T-ASTAKAI---AEQCDVIITMLPN-----SPHV 75 (299)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTCE-E-CSSHHHH---HHHCSEEEECCSS-----HHHH
T ss_pred EEEECchHHHHHHHHHHHhCCCEEEEE--eCCHHHHHHHHHCCCe-e-cCCHHHH---HhCCCEEEEECCC-----HHHH
Confidence 46788875 3 4566666778888877 6666666666655541 1 1111111 1247998884221 1124
Q ss_pred HHHH---HHHHHhccCCcEEEEeeccccCc-CcHHHHHHHHHHcCCEEEE
Q 043503 358 EFTL---YDIYRLLRPGGIFWLDRFFCFGS-QLNETYVPMLDRIGFKKLR 403 (430)
Q Consensus 358 ~~~L---~ei~RvLrPGG~lvl~~f~~~~~-~~~~~~~~ll~~~Gfk~l~ 403 (430)
..++ .++...++||..++-. .... ...+.+.+.+.+.|...+.
T Consensus 76 ~~~~~~~~~l~~~l~~~~~vv~~---s~~~~~~~~~l~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 76 KEVALGENGIIEGAKPGTVLIDM---SSIAPLASREISDALKAKGVEMLD 122 (299)
T ss_dssp HHHHHSTTCHHHHCCTTCEEEEC---SCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHhCcchHhhcCCCCCEEEEC---CCCCHHHHHHHHHHHHHcCCeEEE
Confidence 5556 5677888998865432 1221 1234566667766766543
No 495
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=25.40 E-value=1.3e+02 Score=28.28 Aligned_cols=106 Identities=13% Similarity=0.045 Sum_probs=50.1
Q ss_pred EEEEcCCc-cH--HHHHHHHc-CCEEEEEecCCChhHHH-HHHhcCCeeEEEcccccCCCCCCceeEEEEccchhhcCCc
Q 043503 280 GLDIGGGT-GT--FAARMRER-NVTIITTSLNLDGPFNS-FIASRGLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 280 VLDIGcGt-G~--~a~~La~~-g~~Vv~vdiD~s~~~le-~a~~rg~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
|.=||||. |. ++..+.+. +++++++ .|.++...+ .+++.|. . ...+.+.+ +...|+|+..-.-
T Consensus 8 vgiiG~G~~g~~~~~~~l~~~~~~~lvav-~d~~~~~~~~~~~~~g~-~-~~~~~~~l---~~~~D~V~i~tp~------ 75 (319)
T 1tlt_A 8 IGVVGLGGIAQKAWLPVLAAASDWTLQGA-WSPTRAKALPICESWRI-P-YADSLSSL---AASCDAVFVHSST------ 75 (319)
T ss_dssp EEEECCSTHHHHTHHHHHHSCSSEEEEEE-ECSSCTTHHHHHHHHTC-C-BCSSHHHH---HTTCSEEEECSCT------
T ss_pred EEEECCCHHHHHHHHHHHHhCCCeEEEEE-ECCCHHHHHHHHHHcCC-C-ccCcHHHh---hcCCCEEEEeCCc------
Confidence 46688875 33 33334443 6777744 354443333 3443353 2 22233333 3468998874221
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeeccccCcCcHHHHHHHHHHcCCE
Q 043503 355 SMLEFTLYDIYRLLRPGGIFWLDRFFCFGSQLNETYVPMLDRIGFK 400 (430)
Q Consensus 355 ~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk 400 (430)
... ..-+..+|+.|-.+++...+.......+.+.+..++.|-.
T Consensus 76 ~~h---~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 76 ASH---FDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp THH---HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred hhH---HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 111 2233345666655555433333322334455555665543
No 496
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=25.07 E-value=4.3e+02 Score=26.32 Aligned_cols=116 Identities=11% Similarity=0.088 Sum_probs=57.5
Q ss_pred CCccEEEEEcCCccH-HHHHHHHc-CCEEEEEecCCCh-------------hHHHHHHhcCC-eeE-EEcccccCCCCCC
Q 043503 275 GTIRIGLDIGGGTGT-FAARMRER-NVTIITTSLNLDG-------------PFNSFIASRGL-ISM-HISVSQRLPFFEN 337 (430)
Q Consensus 275 ~~ir~VLDIGcGtG~-~a~~La~~-g~~Vv~vdiD~s~-------------~~le~a~~rg~-i~~-~~~d~~~lpf~d~ 337 (430)
.. ++|+|.+.|+|. ++..+.++ |++|+.+..+++. ...+.+++.+. +-+ +-+|+.++-+-|+
T Consensus 172 ~~-kivvD~~nG~~~~~~~~ll~~lG~~v~~~~~~pDg~f~n~~~~~~~~~~l~~~v~~~~adlgia~DgDaDR~~~vd~ 250 (443)
T 3i3w_A 172 KG-KVVVDCAHGAASHNFEALLDKFGINYVSIASNPDGLNINVGCGATCVSNIKKAVKEQKADLGISLDGDADRIIIVDE 250 (443)
T ss_dssp CS-EEEEECTTSTTTTHHHHHHHHTTCEEEESSCCCCSSCTTTTCSTTCHHHHHHHHHHHTCSEEEEECTTSCBEEEECT
T ss_pred CC-eEEEECCCChHHHHHHHHHHHcCCEEEEECCccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEECCCCceEEEECC
Confidence 45 889999999995 44444444 8888764222221 11233344443 222 2235555432111
Q ss_pred ceeEEEEccchhhcCCchhHHHHHHHHHHhcc--CCcEEEEeeccccCcCcHHHHHHHHHHcCCEEEEEEeccc
Q 043503 338 TLDIVHSMHVLSNWIPDSMLEFTLYDIYRLLR--PGGIFWLDRFFCFGSQLNETYVPMLDRIGFKKLRWNVGMK 409 (430)
Q Consensus 338 sfDlV~~~~~L~~~~~d~~l~~~L~ei~RvLr--PGG~lvl~~f~~~~~~~~~~~~~ll~~~Gfk~l~~~~~~k 409 (430)
. .+++..+.+..++... +++ ++|.++. +..+ ...+..++++.|.++.++.++.+
T Consensus 251 ~----------G~~l~gd~i~~lla~~--l~~~~~~~~vv~-tv~s-----s~~l~~~~~~~G~~~~~t~~G~k 306 (443)
T 3i3w_A 251 N----------GQEIDGDGILNILAQY--SDICGGTNGIVG-TQMT-----NMSYENHYRANKIPFIRSKVGDR 306 (443)
T ss_dssp T----------SCEECHHHHHHHHHHT--TTTTTCCSCEEE-ETTS-----CHHHHHHHHHTTCCEEEESSSTT
T ss_pred C----------CcEeChhHHHHHHHHH--HHHhCCCCeEEE-eecC-----chHHHHHHHHCCCeEEEEeChHH
Confidence 1 1223322232333222 333 3344444 3232 24466678889999998877755
No 497
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=24.74 E-value=2.7e+02 Score=25.93 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=32.3
Q ss_pred EEEEcCCc-c-HHHHHHHHc-CCEEEEEecCCChhHHHHHHh-cCCeeEEEcccccCCCCCCceeEEEEc
Q 043503 280 GLDIGGGT-G-TFAARMRER-NVTIITTSLNLDGPFNSFIAS-RGLISMHISVSQRLPFFENTLDIVHSM 345 (430)
Q Consensus 280 VLDIGcGt-G-~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~-rg~i~~~~~d~~~lpf~d~sfDlV~~~ 345 (430)
|.=||||. | .++..+.+. +++++++ .|.++...+...+ .|.... ..+.+.+- +...|+|+..
T Consensus 4 vgiiG~G~~g~~~~~~l~~~~~~~~~~v-~d~~~~~~~~~~~~~~~~~~-~~~~~~~l--~~~~D~V~i~ 69 (325)
T 2ho3_A 4 LGVIGTGAISHHFIEAAHTSGEYQLVAI-YSRKLETAATFASRYQNIQL-FDQLEVFF--KSSFDLVYIA 69 (325)
T ss_dssp EEEECCSHHHHHHHHHHHHTTSEEEEEE-ECSSHHHHHHHGGGSSSCEE-ESCHHHHH--TSSCSEEEEC
T ss_pred EEEEeCCHHHHHHHHHHHhCCCeEEEEE-EeCCHHHHHHHHHHcCCCeE-eCCHHHHh--CCCCCEEEEe
Confidence 35578875 2 344445444 5677655 3666554443333 344332 23433332 4568998874
No 498
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=24.62 E-value=64 Score=32.49 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=27.1
Q ss_pred cEEEEEcCCc-cHHHHHHHHc-CCEEEEEecCCChhHHHHHHhcCC
Q 043503 278 RIGLDIGGGT-GTFAARMRER-NVTIITTSLNLDGPFNSFIASRGL 321 (430)
Q Consensus 278 r~VLDIGcGt-G~~a~~La~~-g~~Vv~vdiD~s~~~le~a~~rg~ 321 (430)
.+|+=+|+|. |..++.++.. |++|+.+ |.++..++.+.+-|.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~--D~~~~~l~~~~~~G~ 234 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSAT--DVRPAAKEQVASLGA 234 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE--CSSTTHHHHHHHTTC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEE--cCCHHHHHHHHHcCC
Confidence 3568899985 4455555544 9999988 544555666665543
No 499
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=24.48 E-value=3.1e+02 Score=27.78 Aligned_cols=111 Identities=14% Similarity=0.021 Sum_probs=60.6
Q ss_pred EEEcCCc-c-HHHHHHHHcCCEEEEEecCCChhHHHHHHhc----CCeeEEEcccccCCCCCCceeEEEEccchhhcCCc
Q 043503 281 LDIGGGT-G-TFAARMRERNVTIITTSLNLDGPFNSFIASR----GLISMHISVSQRLPFFENTLDIVHSMHVLSNWIPD 354 (430)
Q Consensus 281 LDIGcGt-G-~~a~~La~~g~~Vv~vdiD~s~~~le~a~~r----g~i~~~~~d~~~lpf~d~sfDlV~~~~~L~~~~~d 354 (430)
-=||+|. | .++..|++.|.+|+.. |.++...+...++ |. .. ..+.+.+--.-...|+|+.. ++.
T Consensus 19 gvIGlG~MG~~lA~~La~~G~~V~v~--~r~~~~~~~l~~~~~~~gi-~~-~~s~~e~v~~l~~aDvVil~------Vp~ 88 (480)
T 2zyd_A 19 GVVGMAVMGRNLALNIESRGYTVSIF--NRSREKTEEVIAENPGKKL-VP-YYTVKEFVESLETPRRILLM------VKA 88 (480)
T ss_dssp EEECCSHHHHHHHHHHHTTTCCEEEE--CSSHHHHHHHHHHSTTSCE-EE-CSSHHHHHHTBCSSCEEEEC------SCS
T ss_pred EEEccHHHHHHHHHHHHhCCCeEEEE--eCCHHHHHHHHhhCCCCCe-EE-eCCHHHHHhCCCCCCEEEEE------CCC
Confidence 5577765 2 4566666678888887 6666555544433 32 11 11221111000136888883 222
Q ss_pred -hhHHHHHHHHHHhccCCcEEEEeeccccCc-CcHHHHHHHHHHcCCEEEEE
Q 043503 355 -SMLEFTLYDIYRLLRPGGIFWLDRFFCFGS-QLNETYVPMLDRIGFKKLRW 404 (430)
Q Consensus 355 -~~l~~~L~ei~RvLrPGG~lvl~~f~~~~~-~~~~~~~~ll~~~Gfk~l~~ 404 (430)
...+.++.++...|+||..++-. .... .....+.+.+...|...+..
T Consensus 89 ~~~v~~vl~~l~~~l~~g~iIId~---s~g~~~~t~~l~~~l~~~g~~~v~~ 137 (480)
T 2zyd_A 89 GAGTDAAIDSLKPYLDKGDIIIDG---GNTFFQDTIRRNRELSAEGFNFIGT 137 (480)
T ss_dssp SSHHHHHHHHHGGGCCTTCEEEEC---SCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEC---CCCCHHHHHHHHHHHHHCCCCeeCC
Confidence 24678888998999888754421 1221 12234566677778776543
No 500
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=24.47 E-value=28 Score=34.50 Aligned_cols=29 Identities=24% Similarity=0.382 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHhccCCcEEEEeeccccCc
Q 043503 356 MLEFTLYDIYRLLRPGGIFWLDRFFCFGS 384 (430)
Q Consensus 356 ~l~~~L~ei~RvLrPGG~lvl~~f~~~~~ 384 (430)
.++.+|..+.++|+|||++++..|...+.
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFHSLED 280 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFHSLED 280 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCchhH
Confidence 57889999999999999999988886543
Done!