BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043505
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAV1|MB11_ARATH Myrosinase-binding protein-like At1g52030 OS=Arabidopsis thaliana
GN=F-ATMBP PE=2 SV=1
Length = 642
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG GA WDDGVF VR++++ G G+ + EY+K ++ D+HG
Sbjct: 497 GGNGGASWDDGVFDGVRKILVGQGNDGVAFVTFEYNKGSQAILGDRHG 544
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 18 PWGGQNGARWDDGVFSSVRQVVISY-GAGIDSILIEYDKKGSSVWSDKHG 66
P GG G+ WDDG F VR+V++ G + + EY KG + HG
Sbjct: 161 PQGGNGGSAWDDGAFDGVRKVLVGRNGKFVSYVRFEY-AKGERMVPHAHG 209
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 16 VGPWGGQNGARWDDGVFSSVRQVVISYG-AGIDSILIEYDKKG 57
VG GG G +DDGVF V++V++ + I +EY+K G
Sbjct: 5 VGAMGGNKGGAFDDGVFDGVKKVIVGKDFNNVTYIKVEYEKDG 47
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 16 VGPWGGQNGARWDDGVFSSVRQVVISYG-AGIDSILIEYDKKG 57
V GG G +DDG F VR+V I G +G+ + EY K G
Sbjct: 337 VEALGGNGGTIFDDGAFDHVRKVYIGQGDSGVAYVKFEYRKDG 379
>sp|Q9SAV0|MB12_ARATH Myrosinase-binding protein-like At1g52040 OS=Arabidopsis thaliana
GN=At1g52040 PE=2 SV=1
Length = 462
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG GA WDDGVF VR++++ G G+ + EY+K ++ D HG
Sbjct: 317 GGNGGASWDDGVFDGVRKILVGQGNDGVAFVTFEYNKGSQAILGDGHG 364
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 16 VGPWGGQNGARWDDGVFSSVRQVVISYG-AGIDSILIEYDKKGSSVWSDKHG 66
V GG G +DDGVF VR+V + G +G+ + EY+K G D HG
Sbjct: 160 VEAQGGNGGETFDDGVFDHVRKVYVGQGESGVAYVKFEYEKDGKRETRD-HG 210
>sp|O80998|MB21_ARATH Myrosinase-binding protein-like At2g25980 OS=Arabidopsis thaliana
GN=At2g25980 PE=2 SV=1
Length = 449
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG G WDDG F VR++ + G GI S+ YDK V ++HG
Sbjct: 310 GGDGGESWDDGAFDGVRKIYVGQGENGIASVKFVYDKNNQLVLGEEHG 357
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKG 57
GG G+ WD G+++ +R+V +++ I I ++YDK G
Sbjct: 154 GGTGGSPWDHGIYTGIRKVYVTFSPVSISHIKVDYDKDG 192
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 20 GGQNGARWDDGV-FSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHGGSG 69
GG+ G +WDDG +V ++ + G GI I EY K G +V HG SG
Sbjct: 9 GGKGGNQWDDGADHENVTKIHVRGGLEGIQFIKFEYVKAGQTVVGPIHGVSG 60
>sp|O80950|MB22_ARATH Myrosinase-binding protein-like At2g39310 OS=Arabidopsis thaliana
GN=At2g39310 PE=2 SV=1
Length = 458
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG G WDDGV+ VR++++ G G+ + EY K V D HG
Sbjct: 318 GGNEGVTWDDGVYDGVRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHG 365
>sp|P82859|LECA_CASCR Agglutinin OS=Castanea crenata PE=1 SV=1
Length = 309
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 26 RWDDGVFSSVRQVVISYG-AGIDSILIEYDKK-GSSVWSDKHGGSGG 70
WDDGVF ++R++ + G + I +I + Y K G + S KHGG GG
Sbjct: 176 EWDDGVFPAIRELHLYVGDSVIHAIRVSYQSKDGEPLLSPKHGGEGG 222
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 11 DDHVTVGPWGGQNGARWDDGVFS-SVRQVVISYGAGIDSILIEY-DKKGSSVWSDKHGGS 68
++ +TVG WGG+ G RW V + + + I + GI SI + D+ G S K GG+
Sbjct: 2 EEFLTVGLWGGEGGDRWSFVVNNGGIIGMEIVHANGIASITFKCGDEYGVLQHSRKFGGT 61
Query: 69 G-GFKTNK 75
G G+KT+K
Sbjct: 62 GEGWKTDK 69
>sp|O04312|MB32_ARATH Myrosinase-binding protein-like At3g16440 OS=Arabidopsis thaliana
GN=At3g16440 PE=2 SV=1
Length = 300
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG G WDDG F V++V I GI ++ YDK + D+HG
Sbjct: 161 GGDEGTAWDDGAFDGVKKVYIGQAQDGISAVKFVYDKGAEDIVGDEHG 208
>sp|O80948|MB23_ARATH Myrosinase-binding protein-like At2g39330 OS=Arabidopsis thaliana
GN=At2g39330 PE=1 SV=1
Length = 459
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG G WDDGV+ VR++++ G G+ + EY+K V D HG
Sbjct: 319 GGSGGVAWDDGVYDGVRKILVGQGNDGVAFVKFEYNKGKDLVSGDDHG 366
>sp|O04318|NSP3_ARATH Nitrile-specifier protein 3 OS=Arabidopsis thaliana GN=NSP3 PE=2
SV=1
Length = 467
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG+ G WDDGV+ +V +V + G GI + EY V D+HG
Sbjct: 9 GGETGDVWDDGVYDNVTKVYVGQGQYGIAFVKFEYANGSEVVVGDEHG 56
>sp|Q9SDM9|NSP1_ARATH Nitrile-specifier protein 1 OS=Arabidopsis thaliana GN=NSP1 PE=2
SV=2
Length = 470
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG+ G WDDGV+ +VR+V + GI + EY V D+HG
Sbjct: 9 GGEMGDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHG 56
>sp|O04316|NSP4_ARATH Nitrile-specifier protein 4 OS=Arabidopsis thaliana GN=NSP4 PE=2
SV=1
Length = 619
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG G WDDGV+ +VR+V + GI + EY V D+HG
Sbjct: 158 GGDTGDIWDDGVYDNVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHG 205
>sp|O04309|MB31_ARATH Myrosinase-binding protein-like At3g16470 OS=Arabidopsis thaliana
GN=At3g16470 PE=1 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 TVGPWGGQNGARWDDGVFSSVRQVVISYG-AGIDSILIEYDKKGSSVWSDKHG 66
T+ GG G WDDGV SV+++ + G + + +Y+K V HG
Sbjct: 308 TIPAQGGDGGVAWDDGVHDSVKKIYVGQGDSCVTYFKADYEKASKPVLGSDHG 360
>sp|P83304|LEC_PARPC Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala
PE=1 SV=1
Length = 447
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIE 52
+++GPWGG G W + Q++I G+ I S+ +
Sbjct: 301 ISIGPWGGSGGDPWSYTANEGINQIIIYAGSNIKSVAFK 339
>sp|Q44346|TRAG_AGRT5 Conjugal transfer protein TraG OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=traG PE=3 SV=1
Length = 658
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 15/69 (21%)
Query: 5 ERYEVEDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDK 64
ERY V+ D V P+ R DD RQ S+GAG S L+ +D S
Sbjct: 184 ERYRVDRDSVAAMPF------RADD------RQ---SWGAGGKSPLLCFDGSFGSSHGIV 228
Query: 65 HGGSGGFKT 73
GSGGFKT
Sbjct: 229 FAGSGGFKT 237
>sp|O49326|NSP2_ARATH Nitrile-specifier protein 2 OS=Arabidopsis thaliana GN=NSP2 PE=2
SV=1
Length = 471
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHG 66
GG+ G WDDG + VR+V + G GI + EY V D+ G
Sbjct: 9 GGEIGDVWDDGAYDGVRKVYVGQGEDGIAFVKFEYVNGSQEVVGDERG 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.135 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,723,515
Number of Sequences: 539616
Number of extensions: 1152844
Number of successful extensions: 1833
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1794
Number of HSP's gapped (non-prelim): 38
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)