Query 043505
Match_columns 75
No_of_seqs 106 out of 309
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 09:28:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043505.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043505hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p8s_A Jacalin; hemeagglutinin 99.8 1.4E-19 4.9E-24 120.8 6.8 62 11-72 7-77 (157)
2 1c3k_A Agglutinin; beta prism, 99.8 3.5E-19 1.2E-23 116.9 5.8 65 9-73 3-69 (147)
3 1xxq_A Mannose-binding lectin; 99.8 2.7E-18 9.2E-23 114.4 7.7 61 10-70 13-74 (161)
4 2jz4_A Jasmonate inducible pro 99.7 1E-18 3.5E-23 125.7 4.7 70 2-71 137-212 (299)
5 4ddn_A Ipomoelin; beta prism, 99.7 8.2E-18 2.8E-22 112.6 2.0 64 8-73 11-78 (160)
6 1ouw_A Lectin, agglutinin; bet 99.7 2E-17 6.8E-22 109.1 3.2 62 10-72 2-67 (152)
7 1zgr_A Mannose/glucose-specifi 99.7 1.8E-16 6.3E-21 119.4 8.0 66 2-68 140-210 (447)
8 1zgr_A Mannose/glucose-specifi 99.7 4.7E-17 1.6E-21 122.6 4.6 65 2-69 286-353 (447)
9 2jz4_A Jasmonate inducible pro 99.6 7.4E-17 2.5E-21 116.0 4.0 58 13-70 1-59 (299)
10 3mit_A Lectin; all beta sheet 99.6 1.8E-16 6.3E-21 103.6 3.7 60 11-73 2-63 (141)
11 3apa_A Zymogen granule membran 99.5 9.3E-15 3.2E-19 95.5 5.6 58 12-73 5-66 (141)
12 3llz_A MPA, agglutinin alpha c 99.4 1.6E-13 5.3E-18 89.2 4.9 49 24-72 1-53 (133)
13 2gud_A Griffithsin, GRFT; lect 99.4 1.6E-13 5.4E-18 87.8 2.1 47 13-73 2-48 (122)
14 2gux_A Griffithsin, GRFT; lect 99.3 4E-13 1.4E-17 88.0 0.9 51 9-73 14-64 (138)
15 3aqg_A ZG16B/PAUF, zymogen gra 99.1 2.5E-11 8.7E-16 81.0 3.9 53 17-73 4-59 (158)
16 2gud_A Griffithsin, GRFT; lect 96.0 0.0052 1.8E-07 38.6 3.2 52 17-71 38-92 (122)
17 2gux_A Griffithsin, GRFT; lect 96.0 0.0052 1.8E-07 39.7 3.2 52 17-71 54-108 (138)
18 4ddn_A Ipomoelin; beta prism, 95.2 0.029 1E-06 36.8 4.7 56 11-71 62-127 (160)
19 3mit_A Lectin; all beta sheet 94.0 0.082 2.8E-06 33.7 4.4 50 18-71 54-110 (141)
20 3apa_A Zymogen granule membran 93.9 0.094 3.2E-06 33.4 4.6 54 14-71 53-108 (141)
21 4gx7_A Cytolysin and hemolysin 93.9 0.09 3.1E-06 34.9 4.5 43 18-62 62-110 (152)
22 1c3k_A Agglutinin; beta prism, 93.7 0.12 4E-06 33.0 4.8 55 13-71 55-116 (147)
23 1ouw_A Lectin, agglutinin; bet 92.4 0.45 1.5E-05 30.4 6.1 57 11-71 52-119 (152)
24 3aqg_A ZG16B/PAUF, zymogen gra 92.2 0.24 8.1E-06 32.4 4.7 50 17-70 49-100 (158)
25 3llz_A MPA, agglutinin alpha c 91.5 0.29 1E-05 31.0 4.4 55 13-71 38-102 (133)
26 1xxq_A Mannose-binding lectin; 89.6 0.75 2.5E-05 29.7 5.2 55 13-71 62-130 (161)
27 3p8s_A Jacalin; hemeagglutinin 88.8 0.72 2.5E-05 30.0 4.6 54 14-71 63-126 (157)
28 1xez_A Hemolysin, cytolysin; p 87.2 0.74 2.5E-05 36.8 4.5 43 18-62 631-679 (721)
29 4gx7_A Cytolysin and hemolysin 83.2 2.3 7.7E-05 28.1 4.8 27 27-53 124-151 (152)
30 1wvl_A DNA-binding proteins 7A 47.8 9.2 0.00031 22.2 1.6 12 48-59 29-40 (80)
31 1xez_A Hemolysin, cytolysin; p 34.7 58 0.002 26.2 4.7 27 27-53 693-720 (721)
32 2xiw_A DNA-binding protein 7D; 33.4 19 0.00064 20.9 1.4 12 48-59 40-51 (79)
33 2v2f_A Penicillin binding prot 29.3 25 0.00087 15.6 1.2 12 51-62 8-19 (26)
34 2imj_A Hypothetical protein DU 26.4 1E+02 0.0034 20.4 4.2 25 34-59 76-104 (166)
35 3bqa_A Sensor protein PHOQ; hi 20.6 67 0.0023 20.9 2.4 20 46-65 40-59 (148)
No 1
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus}
Probab=99.79 E-value=1.4e-19 Score=120.82 Aligned_cols=62 Identities=34% Similarity=0.706 Sum_probs=57.0
Q ss_pred cCcEEEceeeCCC-----CcccccCCCCCEEEEEEEeCC--cEeEEEEEEccCCCEEEcCCCCC--CCCcc
Q 043505 11 DDHVTVGPWGGQN-----GARWDDGVFSSVRQVVISYGA--GIDSILIEYDKKGSSVWSDKHGG--SGGFK 72 (75)
Q Consensus 11 ~~~~KiGpwGG~G-----G~~wDdg~~~~v~~I~I~~~~--~I~si~f~Yd~~G~~~~~~~~Gg--~gG~~ 72 (75)
..++|+|||||++ |++|||+++++|++|+|++++ +|++|+|.||++|+.+++.+||+ .++..
T Consensus 7 ~~~~k~Gp~GG~g~~~~~G~~~ddg~~~~v~~I~V~~g~~~~I~~I~f~Yd~~G~~~~~~~hGg~~~gg~~ 77 (157)
T 3p8s_A 7 SQTVIVGPWGAKVSTSSNGKAFDDGAFTGIREINLSYNKETAIGDLQVVYDLNGSPYVGQNHKSFITGFTP 77 (157)
T ss_dssp CCCEEEEEEECCC-----CEEEECCCCSEEEEEEEEECTTSCEEEEEEEEEETTEEEECCCBCCSSCCCEE
T ss_pred ccCEEECcCCCCCCCCCCCCeeecCCCCceEEEEEEECCCceEEEEEEEEeCCCcEEEccCcCCCCCCCCe
Confidence 4689999999999 999999988999999999997 99999999999999999999998 55643
No 2
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A*
Probab=99.77 E-value=3.5e-19 Score=116.85 Aligned_cols=65 Identities=34% Similarity=0.520 Sum_probs=58.2
Q ss_pred eccCcEEEceeeCCCCcccccC-CCCCEEEEEEEeCCcEeEEEEEE-ccCCCEEEcCCCCCCCCccC
Q 043505 9 VEDDHVTVGPWGGQNGARWDDG-VFSSVRQVVISYGAGIDSILIEY-DKKGSSVWSDKHGGSGGFKT 73 (75)
Q Consensus 9 ~~~~~~KiGpwGG~GG~~wDdg-~~~~v~~I~I~~~~~I~si~f~Y-d~~G~~~~~~~~Gg~gG~~~ 73 (75)
.++.++|++||||++|++|||+ .+.+|++|+|+++++|++|+|.| |++|+.+++.+||+.+|+.+
T Consensus 3 ~~~~~~k~~~~GG~gG~~~dd~~~~~~v~~I~v~~g~~I~~i~f~Y~d~~G~~~~~~~~G~~gg~~~ 69 (147)
T 1c3k_A 3 ASDIAVQAGPWGGNGGKRWLQTAHGGKITSIIIKGGTCIFSIQFVYKDKDNIEYHSGKFGVLGDKAE 69 (147)
T ss_dssp --CCSCEEEEEECSCSEEEEEECTTSEEEEEEEEESSSEEEEEEEEECTTCCEEEEEEESCCCCCCE
T ss_pred cccCcEEeCCeECCCCccccCCCCCCCeEEEEEEeCCEEEEEEEEEECCCCCEEECcccCCCCCceE
Confidence 4567899999999999999998 46999999999999999999999 89999999999999888653
No 3
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A*
Probab=99.75 E-value=2.7e-18 Score=114.42 Aligned_cols=61 Identities=31% Similarity=0.713 Sum_probs=56.6
Q ss_pred ccCcEEEceeeCCCCcccccCCCCCEEEEEEEeCCcEeEEEEEEccCCCEEEcCCCCC-CCC
Q 043505 10 EDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGG-SGG 70 (75)
Q Consensus 10 ~~~~~KiGpwGG~GG~~wDdg~~~~v~~I~I~~~~~I~si~f~Yd~~G~~~~~~~~Gg-~gG 70 (75)
+..++|+|||||++|++|||+.+++|++|+|+++++|++|+|.|+++|+.+++.+||+ .++
T Consensus 13 ~~~~~k~g~~GG~gG~~~ddg~~~~v~~I~V~~g~~I~~I~f~Y~~~G~~~~~~~hG~~~gg 74 (161)
T 1xxq_A 13 TSQTIEVGLWGGPGGNAWDDGSYTGIREINLSHGDAIGAFSVIYDLNGQPFTGPTHPGNEPS 74 (161)
T ss_dssp CCCCEEEEEEECSCSEEEECCCCSEEEEEEEEESSSEEEEEEEEEETTEEEECCCCCTTCTT
T ss_pred CccceEECCEECCCCccccCCCCCeeEEEEEEeCCEEEEEEEEEcCCCcEEECccCCCCCCC
Confidence 4568999999999999999998899999999999999999999988999999999998 565
No 4
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.74 E-value=1e-18 Score=125.67 Aligned_cols=70 Identities=26% Similarity=0.568 Sum_probs=64.1
Q ss_pred ccceeeeec-----cCcEEEceeeCCCCcccccCCCCCEEEEEEEeCC-cEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 2 MSYERYEVE-----DDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 2 ~~~~~y~~~-----~~~~KiGpwGG~GG~~wDdg~~~~v~~I~I~~~~-~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
-+||+||.+ ..++|++||||++|++|||+.+++|++|+|++++ +|++|+|.|+++|+.+++.+||+.++.
T Consensus 137 daiG~y~~p~~~~~~~~~k~g~~GG~gG~~~dd~~~~~v~~I~v~~g~~~I~~i~f~Y~~~g~~~~~~~hG~~~g~ 212 (299)
T 2jz4_A 137 YALGAYFATTTTPVTPAKKLSAIGGDEGTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLL 212 (299)
T ss_dssp CCCBCCCCCCCCCCCCCBCCCCCSCSCSCBCCCCCCSCCSEEEEEECSSSEEEEEEEBCCTTCCBCCCCCSCCCTT
T ss_pred eeEEEEEeccCCccccceeccCeeCCCCeecccCCCCceEEEEEEECCcEEEEEEEEEcCCCeEEecccCCCCCCC
Confidence 589999975 4578999999999999999988999999999997 999999999989999888999998775
No 5
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A*
Probab=99.67 E-value=8.2e-18 Score=112.57 Aligned_cols=64 Identities=20% Similarity=0.268 Sum_probs=55.9
Q ss_pred eeccCcEEEceeeCCCCcccc-cCCCCCEEEEEEEeCCc--EeEEEEEE-ccCCCEEEcCCCCCCCCccC
Q 043505 8 EVEDDHVTVGPWGGQNGARWD-DGVFSSVRQVVISYGAG--IDSILIEY-DKKGSSVWSDKHGGSGGFKT 73 (75)
Q Consensus 8 ~~~~~~~KiGpwGG~GG~~wD-dg~~~~v~~I~I~~~~~--I~si~f~Y-d~~G~~~~~~~~Gg~gG~~~ 73 (75)
.+...++|+|||||++|++|| |+.++ |++|+|+++.. |++|+|.| |++| ++++.+||+.+|+..
T Consensus 11 ~~~~~~~k~g~~GG~gG~~fd~dg~~~-v~~I~V~~g~~~~I~~I~f~Y~d~~G-~~~~~~hGg~gG~~~ 78 (160)
T 4ddn_A 11 LAAHSDARSGPVGSNGGQFWSFRPVRP-LNKIVLSFSGSPDQTLNLISITFSSN-PTDIITVGGVGPEPL 78 (160)
T ss_dssp ECCEECEEEEEEEBCCSEEEEEECSSC-CCEEEEEEEECTTSCEEEEEEEEEET-TTEEEEEECCSSCCC
T ss_pred ccCCCCeEECCeECCCCeeccCCCCCe-eEEEEEEECCCCcEEEEEEEEEcCCC-CEEccccCCCCCCCC
Confidence 457789999999999999999 77777 99999999976 99999999 5899 667788999887653
No 6
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1
Probab=99.67 E-value=2e-17 Score=109.11 Aligned_cols=62 Identities=31% Similarity=0.565 Sum_probs=55.4
Q ss_pred ccCcEEEceeeCCCCcccccCCCCCEEEEEEEeCCc-EeEEEEEEcc---CCCEEEcCCCCCCCCcc
Q 043505 10 EDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAG-IDSILIEYDK---KGSSVWSDKHGGSGGFK 72 (75)
Q Consensus 10 ~~~~~KiGpwGG~GG~~wDdg~~~~v~~I~I~~~~~-I~si~f~Yd~---~G~~~~~~~~Gg~gG~~ 72 (75)
...+.|++||||++|++|||+.+.+|++|+|+++.. |++|||.|++ +| .+++.+||+.+|+.
T Consensus 2 ~~~~~~~g~~GG~gG~~~dd~~~~~v~~I~v~~g~~~I~~I~f~Y~~~~~~G-~~~~~~~G~~gg~~ 67 (152)
T 1ouw_A 2 VPMDTISGPWGNNGGNFWSFRPVNKINQIVISYGGGGNNPIALTFSSTKADG-SKDTITVGGGGPDS 67 (152)
T ss_dssp CCCCEEEEEEECSCSEEEEEECSSCCCEEEEEEETTTTEEEEEEEEEECTTS-CEEEEEEECCSSCC
T ss_pred CCCcccccCccCCCCcccccCCCCceEEEEEEECCCEEEEEEEEEeCccCCC-cEeccccCCcCCCC
Confidence 356899999999999999999779999999999976 9999999987 88 56778899988864
No 7
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A*
Probab=99.66 E-value=1.8e-16 Score=119.38 Aligned_cols=66 Identities=23% Similarity=0.416 Sum_probs=57.9
Q ss_pred ccceeeeeccC--cEEEceeeCCCCc-ccccCCCCCEEEEEEEeCCcEeEEEEEEccCCCE--EEcCCCCCC
Q 043505 2 MSYERYEVEDD--HVTVGPWGGQNGA-RWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSS--VWSDKHGGS 68 (75)
Q Consensus 2 ~~~~~y~~~~~--~~KiGpwGG~GG~-~wDdg~~~~v~~I~I~~~~~I~si~f~Yd~~G~~--~~~~~~Gg~ 68 (75)
-|||+|+.+.. ++|++||||++|+ +|||+++++|++|+|+++++|++|+| ||++|+. .+..+||..
T Consensus 140 dsiG~y~~~~~~~~~k~~~~GG~gG~~~~ddg~~~~v~kI~V~~~~~I~~i~f-y~~~g~~~~~~G~~~G~~ 210 (447)
T 1zgr_A 140 DALGIFVQPVPHGTISFGPWGGPAGDDAFNFKVGSWIKDIIIYADAAINSIAF-KDANGHCYGKFGGQDPND 210 (447)
T ss_dssp EEEEEEEEECTTCCEEEEEEECSCCSEEEEEECSSCEEEEEEEESSSEEEEEE-EETTSCEEEEEECCCTTC
T ss_pred eeeeeEEecccccceeeccccCCCCCCcccCCCCCceEEEEEEeCCcEEEEEE-EeCCCcCCceeCCCcCCC
Confidence 38999999854 6999999999999 99999999999999999999999999 9999996 455555544
No 8
>1zgr_A Mannose/glucose-specific lectin; beta-prism, sugar binding protein; 2.50A {Parkia platycephala} PDB: 1zgs_A*
Probab=99.66 E-value=4.7e-17 Score=122.63 Aligned_cols=65 Identities=31% Similarity=0.581 Sum_probs=59.8
Q ss_pred ccceeeeeccC---cEEEceeeCCCCcccccCCCCCEEEEEEEeCCcEeEEEEEEccCCCEEEcCCCCCCC
Q 043505 2 MSYERYEVEDD---HVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGSG 69 (75)
Q Consensus 2 ~~~~~y~~~~~---~~KiGpwGG~GG~~wDdg~~~~v~~I~I~~~~~I~si~f~Yd~~G~~~~~~~~Gg~g 69 (75)
-|||+||.+.. ++|+|||||++|++|||+.+++|++|+|+++++|++||| ++|+.+++.+||+.+
T Consensus 286 ~aiG~y~~~~~~~~~~k~g~~GG~gG~~~ddg~~~~v~~I~v~~g~~I~~I~f---~~g~~~~~~~hG~~g 353 (447)
T 1zgr_A 286 DSIGIYVKPRDVEGSISIGPWGGSGGDPWSYTANEGINQIIIYAGSNIKSVAF---KDTSGLDSATFGGVN 353 (447)
T ss_dssp EEEEEEEEECCCSCCEEEEEEECSCSEEEEEECSSCEEEEEEEESSSEEEEEE---EETTSCBCCCEECCS
T ss_pred EeeEEEEecCCCCCcEEecCeeCCCCccccCCCCCCeEEEEEEeCCEEEEEEE---ECCCEEEccCcCCCC
Confidence 48999998754 799999999999999999999999999999999999999 578888899999987
No 9
>2jz4_A Jasmonate inducible protein isolog; myrosinase binding protein, AT3G16450.1, SAIL, stereo-array isotope labeling, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.64 E-value=7.4e-17 Score=115.96 Aligned_cols=58 Identities=38% Similarity=0.611 Sum_probs=54.5
Q ss_pred cEEEceeeCCCCcccccCCCCCEEEEEEEeC-CcEeEEEEEEccCCCEEEcCCCCCCCC
Q 043505 13 HVTVGPWGGQNGARWDDGVFSSVRQVVISYG-AGIDSILIEYDKKGSSVWSDKHGGSGG 70 (75)
Q Consensus 13 ~~KiGpwGG~GG~~wDdg~~~~v~~I~I~~~-~~I~si~f~Yd~~G~~~~~~~~Gg~gG 70 (75)
++|++||||++|++|||+.+++|++|+|+++ ++|++|+|.|+++|+.+++.+||+.+|
T Consensus 1 ~~k~~~~GG~gG~~~dd~~~~~v~~I~V~~~~~~I~~I~f~Y~~~G~~~~~~~hG~~~g 59 (299)
T 2jz4_A 1 AQKVEAGGGAGGASWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTL 59 (299)
T ss_dssp CCCCCCCSCCSSCCSSCSCCCCCCEEEEEECSSSEEEEEECEECSSCEECCCEEECCBT
T ss_pred CeeeCCeECCCCcccccCCCCeEEEEEEEECCCEEEEEEEEEeCCCEEEECceeCCCCC
Confidence 4799999999999999998899999999985 899999999999999999999999887
No 10
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} SCOP: b.77.3.0 PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A*
Probab=99.62 E-value=1.8e-16 Score=103.58 Aligned_cols=60 Identities=32% Similarity=0.575 Sum_probs=49.2
Q ss_pred cCcEEEceeeCCCCcccccCCCCCEEEEEEEeCCcEeEE--EEEEccCCCEEEcCCCCCCCCccC
Q 043505 11 DDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSI--LIEYDKKGSSVWSDKHGGSGGFKT 73 (75)
Q Consensus 11 ~~~~KiGpwGG~GG~~wDdg~~~~v~~I~I~~~~~I~si--~f~Yd~~G~~~~~~~~Gg~gG~~~ 73 (75)
+.++|+|||||++|++||+..+++|++|+|+++.+|++| +|.|++.. .++ +||+.+|++.
T Consensus 2 ~~~~k~g~~GG~gG~~~d~~~~~~v~~I~V~~g~~I~~I~~~f~y~~~~-~~~--~~Gg~gG~~~ 63 (141)
T 3mit_A 2 NGAIKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDAVDVTFTYYGKT-ETR--HFGGSGGTPH 63 (141)
T ss_dssp --CEEEEEEECSCSEEEEEEECSEEEEEEEEESSSEEEEEEEEEETTEE-EEE--EEECSCSEEE
T ss_pred CCcEEECCEeCCCCccccCCCCCcEEEEEEEeCCeEeEEEEEEEEeCCC-cee--ccCCCCCcee
Confidence 568999999999999999655899999999999999999 99995433 333 7999888653
No 11
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens}
Probab=99.53 E-value=9.3e-15 Score=95.45 Aligned_cols=58 Identities=24% Similarity=0.427 Sum_probs=50.3
Q ss_pred CcEEEceeeCCCCcccccCC---CCCEEEEEEEeCCc-EeEEEEEEccCCCEEEcCCCCCCCCccC
Q 043505 12 DHVTVGPWGGQNGARWDDGV---FSSVRQVVISYGAG-IDSILIEYDKKGSSVWSDKHGGSGGFKT 73 (75)
Q Consensus 12 ~~~KiGpwGG~GG~~wDdg~---~~~v~~I~I~~~~~-I~si~f~Yd~~G~~~~~~~~Gg~gG~~~ 73 (75)
...++|||||++|++|||+. +.+|++|+|+++.+ |++|+|.|++ .++.+||+.+|+.+
T Consensus 5 ~s~~~g~~GG~gG~~~dd~~~~~~~~v~~I~V~~g~~~I~~I~f~Y~~----~~~~~~G~~~G~~~ 66 (141)
T 3apa_A 5 SSSYSGEYGSGGGKRFSHSGNQLDGPITALRVRVNTYYIVGLQVRYGK----VWSDYVGGRNGDLE 66 (141)
T ss_dssp CCEEEEEEECSCSEEEECGGGGGGCSEEEEEEEECSSSEEEEEEEETT----EECCCEECSSSEEE
T ss_pred cccccCCEECCCCcccccCCccCCCCeEEEEEEECCCEEEEEEEEECC----ccccccCCCCCccc
Confidence 46789999999999999984 48999999999977 9999999953 57889999887653
No 12
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ...
Probab=99.42 E-value=1.6e-13 Score=89.24 Aligned_cols=49 Identities=24% Similarity=0.574 Sum_probs=44.4
Q ss_pred CcccccCCCCCEEEEEEEeCCc--EeEEEEEEccCCCEEEcCCCCC--CCCcc
Q 043505 24 GARWDDGVFSSVRQVVISYGAG--IDSILIEYDKKGSSVWSDKHGG--SGGFK 72 (75)
Q Consensus 24 G~~wDdg~~~~v~~I~I~~~~~--I~si~f~Yd~~G~~~~~~~~Gg--~gG~~ 72 (75)
|++|||+.+++|++|+|++++. |++|||.|+++|+.+++.+||+ .++..
T Consensus 1 G~~wDdg~~~~v~~I~v~~g~~~~I~~I~f~Y~~~G~~~~~~~hGg~~~gg~~ 53 (133)
T 3llz_A 1 GVTFDDGAYTGIREINFEYNSETAIGGLRVTYDLNGMPFVAEDHKSFITGFKP 53 (133)
T ss_dssp CEEEECCCCSEEEEEEEEECTTSCEEEEEEEEEETTEEEECCCBCCSSCCCEE
T ss_pred CCCccCCCCCCcEEEEEEECCcceEEEEEEEEEcCCCEEEecCcCCCCCCCCc
Confidence 6899999999999999999977 9999999999999999999998 55543
No 13
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A
Probab=99.36 E-value=1.6e-13 Score=87.83 Aligned_cols=47 Identities=30% Similarity=0.608 Sum_probs=41.8
Q ss_pred cEEEceeeCCCCcccccCCCCCEEEEEEEeCCcEeEEEEEEccCCCEEEcCCCCCCCCccC
Q 043505 13 HVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGSGGFKT 73 (75)
Q Consensus 13 ~~KiGpwGG~GG~~wDdg~~~~v~~I~I~~~~~I~si~f~Yd~~G~~~~~~~~Gg~gG~~~ 73 (75)
++|++||||++|++|| +|++|+|+++++|++|+|.| .+||+.+|+.+
T Consensus 2 ~~k~~~~GG~gG~~~d-----~v~~I~v~~g~~i~~i~~~y---------~~~G~~gG~~~ 48 (122)
T 2gud_A 2 SLTHRKFGGSGGSPFS-----GLSSIAVRSGSYLDAIIIDG---------VHHGGSGGNLS 48 (122)
T ss_dssp CEEEEEEECSCSEEEC-----SCCEEEEEESSSEEEEEETT---------EEEECSCSEEC
T ss_pred CcCccCEECCCCccCC-----CcEEEEEEECCEEEEEEEEE---------ECcCCCCCccc
Confidence 6999999999999999 79999999999999999998 35777777654
No 14
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1
Probab=99.29 E-value=4e-13 Score=87.96 Aligned_cols=51 Identities=29% Similarity=0.578 Sum_probs=44.7
Q ss_pred eccCcEEEceeeCCCCcccccCCCCCEEEEEEEeCCcEeEEEEEEccCCCEEEcCCCCCCCCccC
Q 043505 9 VEDDHVTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGSGGFKT 73 (75)
Q Consensus 9 ~~~~~~KiGpwGG~GG~~wDdg~~~~v~~I~I~~~~~I~si~f~Yd~~G~~~~~~~~Gg~gG~~~ 73 (75)
+...++|++||||++|++|| +|++|+|+++++|++|+|.| .+||+.+|+.+
T Consensus 14 ~~~~~~k~~~~GG~gG~~~d-----~v~~I~V~~g~~Id~I~f~Y---------~~~Gg~gG~~~ 64 (138)
T 2gux_A 14 VPRGSLTHRKFGGSGGSPFS-----GLSSIAVRSGSYLDAIIIDG---------VHHGGSGGNLS 64 (138)
T ss_dssp CCTTSSCCCCCSCSCSCCCC-----SCCEEEEEESSSEEEEEETT---------EEEECSCSEEC
T ss_pred cccCcccccCeeCCCCcCCc-----ccEEEEEEECCEEEEEEEEE---------ECcCCCCCCcc
Confidence 56778999999999999999 79999999999999999998 35777777654
No 15
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens}
Probab=99.14 E-value=2.5e-11 Score=80.95 Aligned_cols=53 Identities=19% Similarity=0.331 Sum_probs=44.0
Q ss_pred ceeeCCCCcccccCCC--CCEEEEEEEeCCc-EeEEEEEEccCCCEEEcCCCCCCCCccC
Q 043505 17 GPWGGQNGARWDDGVF--SSVRQVVISYGAG-IDSILIEYDKKGSSVWSDKHGGSGGFKT 73 (75)
Q Consensus 17 GpwGG~GG~~wDdg~~--~~v~~I~I~~~~~-I~si~f~Yd~~G~~~~~~~~Gg~gG~~~ 73 (75)
.||||.+|++|||... .+|++|+|+++.. |++|||.|++ .++..||+.+|+.+
T Consensus 4 ~~~GG~gG~~~d~~~~~~~~i~~I~V~~g~~~I~~I~f~Y~~----~~~~~~G~~gG~~~ 59 (158)
T 3aqg_A 4 KMYGPGGGKYFSTTEDYDHEITGLRVSVGLLLVKSVQVKLGD----SWDVKLGALGGNTQ 59 (158)
T ss_dssp CCBSSCCSEEEECCCCSSCCEEEEEEEECSSSEEEEEEEESS----SBCCCEECCCSEEE
T ss_pred ccccCCCCcccccCCCCCCCeEEEEEEECCCEEEEEEEEeCC----cCceeeCCCCCeEE
Confidence 5899999999999753 4999999999965 9999999954 34567998888654
No 16
>2gud_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, SARS, sugar binding protein; HET: MAN BMA; 0.94A {Griffithsia} SCOP: b.77.3.1 PDB: 2guc_A* 2gty_A* 2gue_A* 2hyq_A* 2hyr_A* 2nu5_A* 2nuo_A* 3lky_A 3ll0_A 3ll2_A* 3ll1_A
Probab=96.03 E-value=0.0052 Score=38.59 Aligned_cols=52 Identities=31% Similarity=0.342 Sum_probs=37.6
Q ss_pred ceeeCCCCccc-cc--CCCCCEEEEEEEeCCcEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 17 GPWGGQNGARW-DD--GVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 17 GpwGG~GG~~w-Dd--g~~~~v~~I~I~~~~~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
.+||+.+|++. .. ...+-|.+|.++++..|++|+|.=. .|+ +.+++|...|+
T Consensus 38 ~~~G~~gG~~~~~~~l~p~E~It~v~g~~g~~I~sL~f~Tn-~gr--t~g~fG~~~Gt 92 (122)
T 2gud_A 38 VHHGGSGGNLSPTFTFGSGEYISNMTIRSGDYIDNISFETN-MGR--RFGPYGGSGGS 92 (122)
T ss_dssp EEEECSCSEECCCEECCTTCCEEEEEEEESSSEEEEEEEET-TSC--EEEEEECSCSE
T ss_pred ECcCCCCCccceeEEcCCCCeEEEEEEEECCEEEEEEEEeC-CCC--CcccccCCCCe
Confidence 58999999765 33 2337899999999999999999753 333 24456665554
No 17
>2gux_A Griffithsin, GRFT; lectins, domain swapping, mannose binding, HIV, sugar binding protein; 2.00A {Griffithsia} SCOP: b.77.3.1
Probab=96.01 E-value=0.0052 Score=39.65 Aligned_cols=52 Identities=29% Similarity=0.293 Sum_probs=37.9
Q ss_pred ceeeCCCCccc-ccC--CCCCEEEEEEEeCCcEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 17 GPWGGQNGARW-DDG--VFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 17 GpwGG~GG~~w-Ddg--~~~~v~~I~I~~~~~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
.+||+.+|++. ... ..+-|.+|.++++..|++|+|.-. .|+ +.+++|...|+
T Consensus 54 ~~~Gg~gG~~~~~~~L~p~E~It~vsg~~g~~I~sL~F~Tn-~Gr--t~gpfG~~~Gt 108 (138)
T 2gux_A 54 VHHGGSGGNLSPTFTFGSGEYISNMTIRSGDYIDNISFETN-MGR--RFGPYGGSGGS 108 (138)
T ss_dssp EEEECSCSEECCCEECCTTCCEEEEEEEESSSEEEEEEEET-TSC--EEEEEECSCSE
T ss_pred ECcCCCCCCcceeEecCCCCcEEEEEEEECCEEEEEEEEeC-CCC--CcccccCCCCE
Confidence 58999999765 332 337899999999999999999753 343 34457766554
No 18
>4ddn_A Ipomoelin; beta prism, carbohydrate binding protein, carbohydrate/sugar sugar binding protein; HET: AMG; 1.90A {Ipomoea batatas} PDB: 3r50_A* 3r52_A* 3r51_A*
Probab=95.24 E-value=0.029 Score=36.82 Aligned_cols=56 Identities=14% Similarity=0.058 Sum_probs=38.8
Q ss_pred cCcEEEceeeCCCCccc---c--cCCCCCEEEEEEEeCC-----cEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 11 DDHVTVGPWGGQNGARW---D--DGVFSSVRQVVISYGA-----GIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 11 ~~~~KiGpwGG~GG~~w---D--dg~~~~v~~I~I~~~~-----~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
+..+...+|||.+|+.. . ....+ |.+|..+++. +|++|+|.=.+ + +.+++|...|+
T Consensus 62 ~G~~~~~~hGg~gG~~~~~~e~~L~~~E-It~vsG~~g~~~~~~~I~sL~F~Tn~-~---~~~pfG~~~Gt 127 (160)
T 4ddn_A 62 SNPTDIITVGGVGPEPLTYTETVNIDGD-IIEISGMIANYKGYNVIRSIKFTTNK-K---EYGPYGANAGT 127 (160)
T ss_dssp ETTTEEEEEECCSSCCCCEEEEEECCSC-EEEEEEEEEEETTEEEEEEEEEEESS-C---EEEEEECCCSE
T ss_pred CCCEEccccCCCCCCCCcceEEEecCCC-EEEEEEEEcccCCceEEEEEEEEECC-C---ccCCcccCCCC
Confidence 34555689999998875 2 23337 9999999874 79999997543 3 34467765554
No 19
>3mit_A Lectin; all beta sheet protein, beta prism-I fold, mannose specific, binding protein; HET: MAN; 2.32A {Musa acuminata} SCOP: b.77.3.0 PDB: 1x1v_A* 3miu_A* 3miv_A 2bmz_A* 2bmy_A* 2bn0_A*
Probab=93.97 E-value=0.082 Score=33.71 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=36.3
Q ss_pred eeeCCCCccccc--CCCCCEEEEEEEeCC-----cEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 18 PWGGQNGARWDD--GVFSSVRQVVISYGA-----GIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 18 pwGG~GG~~wDd--g~~~~v~~I~I~~~~-----~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
+|||.+|++-.. ...+-|.+|..+++. .|++|+|.-.+ + +..++|...|+
T Consensus 54 ~~Gg~gG~~~~~~l~~~E~it~v~g~~g~~~~~~~I~sL~f~Tn~-g---~~~~~G~~~G~ 110 (141)
T 3mit_A 54 HFGGSGGTPHEIVLQEGEYLVGMKGEFGNYHGVVVVGKLGFSTNK-K---SYGPFGNTGGT 110 (141)
T ss_dssp EEECSCSEEEEEECCTTCCEEEEEEEEEEETTEEEEEEEEEEESS-C---EEEEECSCCCE
T ss_pred ccCCCCCceeEEEECCCCcEEEEEEEEcCcCCceEEEEEEEEeCC-C---ceeCcccCCCc
Confidence 999999987543 333789999999885 89999997543 3 24456665554
No 20
>3apa_A Zymogen granule membrane protein 16; beta-prism fold, sugar binding protein; 1.65A {Homo sapiens}
Probab=93.92 E-value=0.094 Score=33.41 Aligned_cols=54 Identities=28% Similarity=0.184 Sum_probs=38.8
Q ss_pred EEEceeeCCCCcccccCC--CCCEEEEEEEeCCcEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 14 VTVGPWGGQNGARWDDGV--FSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 14 ~KiGpwGG~GG~~wDdg~--~~~v~~I~I~~~~~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
....+||+.+|++-+... .+-|.+|..+++..|++|+|.=.+ ++ ..++|...|+
T Consensus 53 ~~~~~~G~~~G~~~~~~L~~~E~It~v~g~~g~~I~sL~F~Tn~-g~---~~~fG~~~Gt 108 (141)
T 3apa_A 53 VWSDYVGGRNGDLEEIFLHPGESVIQVSGKYKWYLKKLVFVTDK-GR---YLSFGKDSGT 108 (141)
T ss_dssp EECCCEECSSSEEEEEECCTTCCEEEEEEEESSSEEEEEEEETT-SC---EEEEECSCSE
T ss_pred ccccccCCCCCccceEEcCCCCeEEEEEEEECCEEEEEEEEECC-CC---ccccCCCCCc
Confidence 455799999997754433 379999999999999999997533 32 3356665443
No 21
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae}
Probab=93.90 E-value=0.09 Score=34.86 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=33.1
Q ss_pred eeeCCCCcccccCCCCCEEEEEEEeCC------cEeEEEEEEccCCCEEEc
Q 043505 18 PWGGQNGARWDDGVFSSVRQVVISYGA------GIDSILIEYDKKGSSVWS 62 (75)
Q Consensus 18 pwGG~GG~~wDdg~~~~v~~I~I~~~~------~I~si~f~Yd~~G~~~~~ 62 (75)
..||+||+.--+.. .+|++|.|.++. .|-++.|.|+ ||..++.
T Consensus 62 lvGG~GGsL~~IDl-s~V~sI~vT~G~f~~gg~hilaltF~~~-dGS~v~~ 110 (152)
T 4gx7_A 62 LVGGNGGSLSSVDL-SGVKSITATSGDFQYGGQQLVALTFTYQ-DGRQQTV 110 (152)
T ss_dssp CEECSCSEEEEEEC-TTEEEEEEEEEEETTSSEEEEEEEEEET-TSCEEEE
T ss_pred ccccCCCcccEeeh-hhcEEEEEEeeeeeccCceEEEEEEEEc-CCcEEEE
Confidence 36899998874443 799999999884 4999999995 5665543
No 22
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A*
Probab=93.74 E-value=0.12 Score=33.04 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=37.8
Q ss_pred cEEEceeeCCCCccccc--CCCCCEEEEEEEeC-----CcEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 13 HVTVGPWGGQNGARWDD--GVFSSVRQVVISYG-----AGIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 13 ~~KiGpwGG~GG~~wDd--g~~~~v~~I~I~~~-----~~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
....++||+.+|+.-.. ...+-|.+|..+++ ..|++|+|.=.+ ++ ..++|...|+
T Consensus 55 ~~~~~~~G~~gg~~~~~~L~p~E~it~vsg~~g~~~g~~~I~sL~f~Tn~-~~---~~~fG~~~g~ 116 (147)
T 1c3k_A 55 EYHSGKFGVLGDKAETITFAEDEDITAISGTFGAYYHMTVVTSLTFQTNK-KV---YGPFGTVASS 116 (147)
T ss_dssp EEEEEEESCCCCCCEEEECCTTCCEEEEEEEEEESSSSEEEEEEEEEESS-CE---EEEEECCCSE
T ss_pred EEECcccCCCCCceEEEEeCCCCcEEEEEEEEcccCCccEEEEEEEEECC-Cc---eeCCcCCCCc
Confidence 34557899999876433 33379999999988 379999997533 32 3456665543
No 23
>1ouw_A Lectin, agglutinin; beta-prism fold, mannose-binding, jacali related, sugar binding protein; 1.37A {Calystegia sepium} SCOP: b.77.3.1
Probab=92.36 E-value=0.45 Score=30.42 Aligned_cols=57 Identities=14% Similarity=0.046 Sum_probs=38.8
Q ss_pred cCcEEEceeeCCCCcc-----cccC-CCCCEEEEEEEeC-----CcEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 11 DDHVTVGPWGGQNGAR-----WDDG-VFSSVRQVVISYG-----AGIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 11 ~~~~KiGpwGG~GG~~-----wDdg-~~~~v~~I~I~~~-----~~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
+..+..++||+.+|.. +... ..+-|.+|..+++ .+|++|+|.=.+ + +..++|...|.
T Consensus 52 ~G~~~~~~~G~~gg~~~~~~~~~l~~p~E~it~vsg~~g~~~~~~~I~sL~F~Tn~-~---~~~~fG~~~G~ 119 (152)
T 1ouw_A 52 DGSKDTITVGGGGPDSITGTEMVNIGTDEYLTGISGTFGIYLDNNVLRSITFTTNL-K---AHGPYGQKVGT 119 (152)
T ss_dssp TSCEEEEEEECCSSCCCCEEEEEECCTTCCEEEEEEEEEEETTEEEEEEEEEEESS-C---EEEEEECSCSE
T ss_pred CCcEeccccCCcCCCCcccEEEEECCCCCEEEEEEEEEcCCCCccEEEEEEEEECC-C---cccCCcCCCCc
Confidence 4456678999999865 3333 3378999999986 389999997533 2 23456655443
No 24
>3aqg_A ZG16B/PAUF, zymogen granule protein 16 homolog B; beta-prism fold, unknown function; 2.75A {Homo sapiens}
Probab=92.20 E-value=0.24 Score=32.42 Aligned_cols=50 Identities=14% Similarity=0.148 Sum_probs=36.2
Q ss_pred ceeeCCCCcccccCC--CCCEEEEEEEeCCcEeEEEEEEccCCCEEEcCCCCCCCC
Q 043505 17 GPWGGQNGARWDDGV--FSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGSGG 70 (75)
Q Consensus 17 GpwGG~GG~~wDdg~--~~~v~~I~I~~~~~I~si~f~Yd~~G~~~~~~~~Gg~gG 70 (75)
..||+.+|+.-+... .+-|.+|..+++..|++|+|.=.+ ++ ..++|...|
T Consensus 49 ~~~G~~gG~~~e~~L~p~EyIt~vsG~yg~~I~sL~F~TNk-g~---~~~fG~~~G 100 (158)
T 3aqg_A 49 VKLGALGGNTQEVTLQPGEYITKVFVAFQAFLRGMVMYTSK-DR---YFYFGKLDG 100 (158)
T ss_dssp CCEECCCSEEEEEECCTTCCEEEEEEEESSSEEEEEEEETT-SC---EEEEECCCS
T ss_pred eeeCCCCCeEEEEEeCCCCEEEEEEEEeCCEEEEEEEEECC-Cc---ccCccCCCC
Confidence 579999998765433 389999999999999999997533 33 234554444
No 25
>3llz_A MPA, agglutinin alpha chain; maclura pomifera agglutinin, MPA complex, GAL-beta-1, 3 lectin, sugar binding protein; HET: GAL NGA; 1.55A {Maclura pomifera} PDB: 3lly_A 1jot_A* 3lm1_A* 1m26_A* 1jac_A 1kuj_A* 1ku8_A* 1pxd_A* 1ugw_C* 1ugy_C* 1uh0_A* 1uh1_A* 1ws4_C* 1ws5_C* 1ugx_A* 1ugw_A* 1ugy_A* 1ws4_A* 1ws5_A* 1toq_A* ...
Probab=91.46 E-value=0.29 Score=30.96 Aligned_cols=55 Identities=13% Similarity=-0.043 Sum_probs=38.4
Q ss_pred cEEEceeeC--CCCcccccC---CCCCEEEEEEEeCC-----cEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 13 HVTVGPWGG--QNGARWDDG---VFSSVRQVVISYGA-----GIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 13 ~~KiGpwGG--~GG~~wDdg---~~~~v~~I~I~~~~-----~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
.+...+||| .+|..-+.. ..+-|.+|..+++. .|++|+|.=.+ + +.+++|...|+
T Consensus 38 ~~~~~~hGg~~~gg~~~~~~L~~p~Eyit~v~g~~g~~~~~~~I~sL~f~Tn~-~---~~~~~G~~~G~ 102 (133)
T 3llz_A 38 PFVAEDHKSFITGFKPVKISLEFPSEYIVEVSGYVGKVEGYTVIRSLTFKTNK-Q---TYGPYGVTNGT 102 (133)
T ss_dssp EEECCCBCCSSCCCEEEEEECCTTTCCEEEEEEEEEEETTEEEEEEEEEEESS-C---EEEEEECCCSE
T ss_pred EEEecCcCCCCCCCCceEEEECCCCCEEEEEEEEEeCcCCcEEEEEEEEEECC-C---ceecccCCCCc
Confidence 556689999 777664433 33789999999885 89999997533 2 34467765554
No 26
>1xxq_A Mannose-binding lectin; tetrameric B-prism fold, jacalin-fold, sugar binding protein; 1.80A {Morus nigra} PDB: 1xxr_A* 1j4t_A 1j4s_A 1j4u_A* 1vbp_A* 1vbo_A*
Probab=89.61 E-value=0.75 Score=29.74 Aligned_cols=55 Identities=16% Similarity=0.047 Sum_probs=36.6
Q ss_pred cEEEceeeC-CCC---cccccC-CCCCEEEEEEEeCC---------cEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 13 HVTVGPWGG-QNG---ARWDDG-VFSSVRQVVISYGA---------GIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 13 ~~KiGpwGG-~GG---~~wDdg-~~~~v~~I~I~~~~---------~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
.+.-.+||+ .+| ..+... ..+-|.+|..+++. +|++|+|.=.+ ++ ..++|...|+
T Consensus 62 ~~~~~~hG~~~gg~~~~~~~L~~p~EyIt~vsG~~g~~~~~~~~~~~I~sL~F~Tnk-g~---~~pfG~~~G~ 130 (161)
T 1xxq_A 62 PFTGPTHPGNEPSFKTVKITLDFPNEFLVSVSGYTGVLARLATGKDVIRSLTFKTNK-KT---YGPYGKEEGT 130 (161)
T ss_dssp EEECCCCCTTCTTSEEEEEECCTTTCCEEEEEEEEECCTTTCSSCCEEEEEEEEESS-CE---EEEEECCCSE
T ss_pred EEECccCCCCCCCCcceEEEecCCCceEEEEEEEECCccccCCCCcEEEEEEEEECC-CC---cccccCCCCc
Confidence 344578998 666 234433 34789999999874 79999997533 32 3457766554
No 27
>3p8s_A Jacalin; hemeagglutinin, sugars, sugar binding P; 2.00A {Artocarpus heterophyllus}
Probab=88.81 E-value=0.72 Score=29.97 Aligned_cols=54 Identities=11% Similarity=-0.066 Sum_probs=36.6
Q ss_pred EEEceeeC--CCCcc--cccC-CCCCEEEEEEEeC-----CcEeEEEEEEccCCCEEEcCCCCCCCCc
Q 043505 14 VTVGPWGG--QNGAR--WDDG-VFSSVRQVVISYG-----AGIDSILIEYDKKGSSVWSDKHGGSGGF 71 (75)
Q Consensus 14 ~KiGpwGG--~GG~~--wDdg-~~~~v~~I~I~~~-----~~I~si~f~Yd~~G~~~~~~~~Gg~gG~ 71 (75)
+.-.+||+ .+|.. +... ..+-|.+|..+++ ..|++|+|.=.+ + +.+++|...|+
T Consensus 63 ~~~~~hGg~~~gg~~~e~~L~yp~EyIt~vsG~~g~~~~~~~I~sL~F~Tn~-r---t~~~fG~~~Gt 126 (157)
T 3p8s_A 63 YVGQNHKSFITGFTPVKISLDFPSEYIMEVSGYTGNVSGYVVVRSLTFKTNK-K---TYGPYGVTSGT 126 (157)
T ss_dssp EECCCBCCSSCCCEEEEEECCTTTCCEEEEEEEEEEETTEEEEEEEEEEESS-C---EEEEEECCCSE
T ss_pred EEccCcCCCCCCCCeEEEEECCCCCEEEEEEEEEeCCCCcEEEEEEEEEECC-C---ceECCcCCCCc
Confidence 34468999 67754 3334 3478999999987 489999997533 2 35556765553
No 28
>1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A
Probab=87.25 E-value=0.74 Score=36.77 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=33.7
Q ss_pred eeeCCCCcccccCCCCCEEEEEEEeCC------cEeEEEEEEccCCCEEEc
Q 043505 18 PWGGQNGARWDDGVFSSVRQVVISYGA------GIDSILIEYDKKGSSVWS 62 (75)
Q Consensus 18 pwGG~GG~~wDdg~~~~v~~I~I~~~~------~I~si~f~Yd~~G~~~~~ 62 (75)
..||+||+.--+.. .+|++|.|.++. .|-.+.|.|+ ||..++.
T Consensus 631 lvGG~GGsL~~VDl-s~V~sI~vTsG~f~~Gg~~llaltFt~~-dGS~~~v 679 (721)
T 1xez_A 631 LVGGNGGSLSSVDL-SGVKSITATSGDFQYGGQQLVALTFTYQ-DGRQQTV 679 (721)
T ss_dssp CEECSCSEEEEEEC-TTEEEEEEEEEEETTSSEEEEEEEEEET-TSCEEEE
T ss_pred ccccCCCccceeeh-hcceEEEEeeeeeecCCeeEEEEEEEEc-CCcEEEE
Confidence 46999999884444 799999999885 4999999995 5665553
No 29
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae}
Probab=83.15 E-value=2.3 Score=28.11 Aligned_cols=27 Identities=11% Similarity=0.054 Sum_probs=23.0
Q ss_pred cccCCCCCEEEEEEEeC-CcEeEEEEEE
Q 043505 27 WDDGVFSSVRQVVISYG-AGIDSILIEY 53 (75)
Q Consensus 27 wDdg~~~~v~~I~I~~~-~~I~si~f~Y 53 (75)
||.+.-..|++|.|+++ ..|+.+||+.
T Consensus 124 f~vP~G~~I~~inVWs~gWlV~gvQF~l 151 (152)
T 4gx7_A 124 FDLPDAAKITQLKIWADDWLVKGVQFDL 151 (152)
T ss_dssp EECCTTCCEEEEEEEECSSSEEEEEEEE
T ss_pred EECCCCCeEEEEEEeecCcEEEEEEEEe
Confidence 45555589999999999 8999999986
No 30
>1wvl_A DNA-binding proteins 7A/7B/7D, GCN4; leucine zipper, protein engineering, synchrotron radiation, thermophIle, X-RAY crystallography; 2.60A {Sulfolobus acidocaldarius} SCOP: b.34.13.1
Probab=47.77 E-value=9.2 Score=22.20 Aligned_cols=12 Identities=25% Similarity=0.626 Sum_probs=9.6
Q ss_pred EEEEEEccCCCE
Q 043505 48 SILIEYDKKGSS 59 (75)
Q Consensus 48 si~f~Yd~~G~~ 59 (75)
.|+|.||.+|+.
T Consensus 29 mvsftyddngkt 40 (80)
T 1wvl_A 29 MVSFTYDDNGKT 40 (80)
T ss_dssp EEEEEEEETTEE
T ss_pred eEEEEEcCCCcc
Confidence 678999888864
No 31
>1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A
Probab=34.74 E-value=58 Score=26.17 Aligned_cols=27 Identities=11% Similarity=0.054 Sum_probs=22.7
Q ss_pred cccCCCCCEEEEEEEeC-CcEeEEEEEE
Q 043505 27 WDDGVFSSVRQVVISYG-AGIDSILIEY 53 (75)
Q Consensus 27 wDdg~~~~v~~I~I~~~-~~I~si~f~Y 53 (75)
+|.+....|+.|.|++. ..|+.+||.+
T Consensus 693 f~vP~Gs~i~~~nVWs~gWlV~gvQF~l 720 (721)
T 1xez_A 693 FDLPDAAKITQLKIWADDWLVKGVQFDL 720 (721)
T ss_dssp EECCTTCCEEEEEEEECSSCEEEEEEEE
T ss_pred EECCCCCeeeeeEEeecCeEEEEEEEEe
Confidence 45555589999999999 7999999985
No 32
>2xiw_A DNA-binding protein 7D; HET: MSE; 1.50A {Sulfolobus acidocaldarius}
Probab=33.37 E-value=19 Score=20.89 Aligned_cols=12 Identities=17% Similarity=0.451 Sum_probs=9.4
Q ss_pred EEEEEEccCCCE
Q 043505 48 SILIEYDKKGSS 59 (75)
Q Consensus 48 si~f~Yd~~G~~ 59 (75)
.++|.||.+|+.
T Consensus 40 mvsFtYddnGKt 51 (79)
T 2xiw_A 40 NVKFLYNDNGKY 51 (79)
T ss_dssp EEEEEEEETTEE
T ss_pred eeEEEEcCCCcc
Confidence 578999878864
No 33
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=29.29 E-value=25 Score=15.59 Aligned_cols=12 Identities=25% Similarity=0.285 Sum_probs=9.2
Q ss_pred EEEccCCCEEEc
Q 043505 51 IEYDKKGSSVWS 62 (75)
Q Consensus 51 f~Yd~~G~~~~~ 62 (75)
.-||++|+.+..
T Consensus 8 ~IYD~~g~~i~~ 19 (26)
T 2v2f_A 8 KIYDNKNQLIAD 19 (26)
T ss_pred EEEeCCCCEeee
Confidence 468999988764
No 34
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=26.40 E-value=1e+02 Score=20.41 Aligned_cols=25 Identities=16% Similarity=0.212 Sum_probs=15.4
Q ss_pred CEEE-EEEEeCCcEeEEEEEE---ccCCCE
Q 043505 34 SVRQ-VVISYGAGIDSILIEY---DKKGSS 59 (75)
Q Consensus 34 ~v~~-I~I~~~~~I~si~f~Y---d~~G~~ 59 (75)
||+| +.-..++.| +++|.| |.+|+=
T Consensus 76 rLiKELwaf~~nRI-AVRFaYEw~D~~gqW 104 (166)
T 2imj_A 76 RLIKELWAFTDNRI-AVRYAYEWHDDSGNW 104 (166)
T ss_dssp EEEEEEEEEETTEE-EEEEEEEEECTTSCE
T ss_pred hhhhhhheecCCeE-EEEEEeEEecCCCCE
Confidence 4444 444455777 788877 566764
No 35
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=20.55 E-value=67 Score=20.92 Aligned_cols=20 Identities=20% Similarity=0.677 Sum_probs=16.4
Q ss_pred EeEEEEEEccCCCEEEcCCC
Q 043505 46 IDSILIEYDKKGSSVWSDKH 65 (75)
Q Consensus 46 I~si~f~Yd~~G~~~~~~~~ 65 (75)
--++-|-||++|+..++.++
T Consensus 40 ~ptLvlIYDe~G~lLW~qr~ 59 (148)
T 3bqa_A 40 SPTMTLIYDENGQLLWAQRD 59 (148)
T ss_dssp CSCEEEEECTTSCEEEESSC
T ss_pred CCeEEEEEcCCCcEEEecCc
Confidence 45788999999999998753
Done!