BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043507
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3
SV=1
Length = 68
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 7 LKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAF 66
VDM+CEGC AV RVL K+ GVE FDIDL +KV + D +L+T+ K GK ++
Sbjct: 6 FSVDMTCEGCSNAVSRVLNKLGGVE-FDIDLPNKKVCINSEHSVDILLETLEKTGKAVSY 64
Query: 67 W 67
Sbjct: 65 L 65
>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1
Length = 68
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 7 LKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAF 66
VDM+CEGC AV RVL K+ GV+ FDIDL +KV + D +L+T+ K GK ++
Sbjct: 6 FSVDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64
Query: 67 W 67
Sbjct: 65 L 65
>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1
Length = 68
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 7 LKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAF 66
VDM+CEGC AV RVL K+ GV+ FDIDL +KV + D +L+T+ K GK ++
Sbjct: 6 FSVDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64
Query: 67 W 67
Sbjct: 65 L 65
>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1
Length = 68
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 7 LKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAF 66
VDM+CEGC AV RVL K+ GVE F+IDL +KV + D +L T++K GK ++
Sbjct: 6 FSVDMTCEGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIDSEHSSDTLLATLNKTGKAVSY 64
Query: 67 W 67
Sbjct: 65 L 65
>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1
SV=1
Length = 68
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 7 LKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAF 66
VDM+C GC AV RVL K+ GVE F+IDL +KV ++ D +L T++K GK ++
Sbjct: 6 FSVDMTCGGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIESEHSSDILLATLNKTGKAVSY 64
Query: 67 W 67
Sbjct: 65 L 65
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 3 QTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVS-KAG 61
QTV +KV M CEGC V+R + M GV + ++ K KVTV G V P+ V+ +S + G
Sbjct: 26 QTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTG 85
Query: 62 KKTAFW 67
KK W
Sbjct: 86 KKVELW 91
>sp|O00244|ATOX1_HUMAN Copper transport protein ATOX1 OS=Homo sapiens GN=ATOX1 PE=1 SV=1
Length = 68
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 7 LKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAF 66
VDM+C GC AV RVL K+ GV+ +DIDL +KV ++ D +L T+ K GK ++
Sbjct: 6 FSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 64
Query: 67 WEEE 70
E
Sbjct: 65 LGLE 68
>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CCS1 PE=3 SV=2
Length = 250
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 5 VVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKT 64
+V V M C+ C +V L ++G+ +DIDLK VT +G+V P +++ + GK
Sbjct: 7 IVFAVPMECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQSTGKDA 66
Query: 65 AFWEEEKPASA 75
P SA
Sbjct: 67 IIRGTGAPNSA 77
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium
discoideum GN=atox1 PE=3 SV=2
Length = 67
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 9 VDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGN-VQPDAVLQTVSKAGKKTAF 66
VDM+C GC AV +L K+DGV IDL+ +KV+ + + + D +L+ + K GKK +
Sbjct: 7 VDMTCGGCSKAVNAILSKIDGVSNIQIDLENKKVSCESSKMGADELLKNIQKTGKKCSI 65
>sp|Q6BZU2|CCS1_YARLI Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CCS1 PE=3 SV=1
Length = 234
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKA 60
MS T V + CE C +VK+ L + G+E+ D L +Q ++V G P +++ V
Sbjct: 1 MSFTTTFAVPLECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNI 60
Query: 61 GKKTAFWEEEKPASA 75
GK +P SA
Sbjct: 61 GKDAIVRGTGQPNSA 75
>sp|P40202|CCS1_YEAST Superoxide dismutase 1 copper chaperone OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CCS1 PE=1
SV=1
Length = 249
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 9 VDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAFWE 68
+ M CE C +K L + G+ + + D+++Q ++V+ +V P ++ T+ GK
Sbjct: 13 IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG 72
Query: 69 EEKPASA 75
KP S+
Sbjct: 73 AGKPNSS 79
>sp|Q6CIG2|CCS1_KLULA Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CCS1 PE=3 SV=1
Length = 245
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 9 VDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAFWE 68
V+M CE C +++ L ++G++ D+K+ + V+G+ P A++ + G+
Sbjct: 15 VEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNCGRDGIIRG 74
Query: 69 EEKPASA 75
KP SA
Sbjct: 75 TGKPNSA 81
>sp|Q8ZR95|COPA_SALTY Copper-exporting P-type ATPase A OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=copA PE=1 SV=3
Length = 833
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 MSQTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSK 59
MSQT+ L +D +SC C VK L + VE D+ + E VT G DA+++T+ +
Sbjct: 1 MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVELADVTVTEAHVT--GTASADALIETIKQ 58
Query: 60 AGKKTAFWEEEKPASAESDSKPTEAVAA 87
AG + ES S P+EA+AA
Sbjct: 59 AGYGATLSHPKAKPLTES-SIPSEALAA 85
>sp|Q8Z8S4|COPA_SALTI Copper-exporting P-type ATPase A OS=Salmonella typhi GN=copA PE=3
SV=3
Length = 833
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 MSQTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSK 59
MSQT+ L +D +SC C VK L + VE D+ + E VT G DA+++T+ +
Sbjct: 1 MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVELADVTVTEAHVT--GTASADALIETIKQ 58
Query: 60 AGKKTAFWEEEKPASAESDSKPTEAVAA 87
AG + ES S P+EA+AA
Sbjct: 59 AGYGATLSHPKAKPLTES-SIPSEALAA 85
>sp|Q75DD6|CCS1_ASHGO Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=CCS1 PE=3 SV=1
Length = 238
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 9 VDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAFWE 68
V M C C G + R L + GV+ DL+ Q V V+G P +++Q ++ G+
Sbjct: 14 VPMHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRGIAPPSSIVQALAATGRDAILRG 73
Query: 69 EEKPASA 75
+P SA
Sbjct: 74 SGEPDSA 80
>sp|P38636|ATX1_YEAST Metal homeostasis factor ATX1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ATX1 PE=1 SV=1
Length = 73
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 7 LKVDMSCEGCYGAVKRVLGKMD-GVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGK 62
V M+C GC GAV +VL K++ V DI L++Q V V + D +L+ + K GK
Sbjct: 9 FNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGK 65
>sp|Q8CN01|COPZ_STAES Copper chaperone CopZ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=copZ PE=3 SV=1
Length = 68
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGN 47
M+Q ++ MSCE C AV+ L K++GV + +++L E V V+ N
Sbjct: 1 MTQKIIKVEGMSCEHCRNAVESALAKLNGVSSAEVNLDENHVRVEYN 47
>sp|Q5HL55|COPZ_STAEQ Copper chaperone CopZ OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=copZ PE=3 SV=1
Length = 68
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGN 47
M+Q ++ MSCE C AV+ L K++GV + +++L E V V+ N
Sbjct: 1 MTQKIIKVEGMSCEHCRNAVESALAKLNGVSSAEVNLDENHVRVEYN 47
>sp|O74735|ATX1_SCHPO Metal homeostasis factor atx1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=atx1 PE=3 SV=1
Length = 68
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 7 LKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGK 62
V M+C+GC A+ RVL ++ GVE I +++Q+V V + + V QT+ K GK
Sbjct: 5 FNVAMACDGCKNAIDRVLTRL-GVEDKSISVEKQEVIVTTDKPYELVEQTIKKTGK 59
>sp|Q8ZCA7|COPA_YERPE Copper-exporting P-type ATPase A OS=Yersinia pestis GN=copA PE=3
SV=1
Length = 961
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 6 VLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTA 65
+L MSC C V+ L ++DGV+ ++L E+ V G +A++ V AG
Sbjct: 230 LLLTGMSCASCVSKVQNALQRVDGVQVARVNLAERSALVTGTQNNEALIAAVKNAGYGAE 289
Query: 66 FWEEE 70
E+E
Sbjct: 290 IIEDE 294
>sp|P73241|ATCS_SYNY3 Cation-transporting ATPase PacS OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=pacS PE=1 SV=1
Length = 745
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 1 MSQTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDID--LKEQKVTVKGNVQPDAVLQTV 57
M+QT+ L+++ M C C +++R + K+ GV++ ++ L++ V+ G P + V
Sbjct: 1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAV 60
Query: 58 SKAGKKTAFWEEEKPASAES-DSKP 81
+AG +++ +S ++ D KP
Sbjct: 61 ERAGYHARVLKQQVLSSQQTEDRKP 85
>sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium meliloti (strain 1021)
GN=actP2 PE=3 SV=1
Length = 827
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 11 MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPD--AVLQTVSKAGKKTAFWE 68
M+C C V++ + + GV + +++L ++ TV+ + +PD AVL + KAG
Sbjct: 24 MTCASCVRRVEKAITAVPGVASANVNLATERATVQFDGEPDTLAVLHAIEKAGYAPRIAT 83
Query: 69 EE 70
EE
Sbjct: 84 EE 85
>sp|Q79ZY4|COPZ_STAAW Copper chaperone CopZ OS=Staphylococcus aureus (strain MW2)
GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A8Z3F9|COPZ_STAAT Copper chaperone CopZ OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q6G6B6|COPZ_STAAS Copper chaperone CopZ OS=Staphylococcus aureus (strain MSSA476)
GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q7A3E5|COPZ_STAAN Copper chaperone CopZ OS=Staphylococcus aureus (strain N315)
GN=copZ PE=1 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q99R79|COPZ_STAAM Copper chaperone CopZ OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A6QK48|COPZ_STAAE Copper chaperone CopZ OS=Staphylococcus aureus (strain Newman)
GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q5HCZ2|COPZ_STAAC Copper chaperone CopZ OS=Staphylococcus aureus (strain COL)
GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A5IVY4|COPZ_STAA9 Copper chaperone CopZ OS=Staphylococcus aureus (strain JH9)
GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q2FV63|COPZ_STAA8 Copper chaperone CopZ OS=Staphylococcus aureus (strain NCTC 8325)
GN=copZ PE=1 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q2FDU9|COPZ_STAA3 Copper chaperone CopZ OS=Staphylococcus aureus (strain USA300)
GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A6U4T9|COPZ_STAA2 Copper chaperone CopZ OS=Staphylococcus aureus (strain JH1)
GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|A7X6S3|COPZ_STAA1 Copper chaperone CopZ OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=copZ PE=3 SV=1
Length = 68
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + D++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQ 45
>sp|Q9WU84|CCS_MOUSE Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs
PE=1 SV=1
Length = 274
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 9 VDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAF 66
V MSC+ C AV + L + GV+ D+ L+ Q V V+ + V + G++
Sbjct: 18 VQMSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTGRQAVL 75
>sp|Q9KPZ7|COPA_VIBCH Copper-exporting P-type ATPase A OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=copA PE=3
SV=1
Length = 915
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 2 SQTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKG-NVQPDAVLQTVSK 59
SQT+ L + M+C C +V++ L ++GV++ ++L EQ V+G P +L +
Sbjct: 171 SQTLSLLIKGMTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRGIFANPQPLLNAIQS 230
Query: 60 AG 61
+G
Sbjct: 231 SG 232
>sp|Q54F73|CCS_DICDI Probable copper chaperone for superoxide dismutase
OS=Dictyostelium discoideum GN=ccs PE=3 SV=1
Length = 316
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 5 VVLKVDMSCEGCYGAVKRVL-GKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGK 62
V L VD+SC+ C ++ + L K++ + + D+ EQ++ ++G +L+T+ G+
Sbjct: 10 VELNVDISCQSCVDSISKELREKLENTKLVEHDIPEQRIVLQGTDLTQDILETIKNTGR 68
>sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=copA PE=3 SV=1
Length = 794
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 9 VDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGN---VQPDAVLQTVSKAG 61
+ M+C C +++VL + DGV+ ++L + T+ N DA+++ + K G
Sbjct: 79 IGMTCAACSNRIEKVLNRTDGVDQATVNLTTENATISYNPSATSVDALIKKIQKIG 134
>sp|Q4L971|COPZ_STAHJ Copper chaperone CopZ OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=copZ PE=3 SV=2
Length = 68
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 11 MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTV 44
MSC+ C AV+ L K++GV + ++DL + +V V
Sbjct: 11 MSCDHCRNAVESALAKLNGVTSAEVDLDKNQVRV 44
>sp|Q6PWT7|CCS_PIG Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS
PE=2 SV=1
Length = 274
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 9 VDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKKTAF 66
V M+C+ C AV R L + G+++ ++ L+ Q V V+ + V + G++
Sbjct: 18 VQMTCQSCVDAVSRSLQGVAGIQSVEVQLENQMVLVQTTLPSQVVQALLEDTGRQAVL 75
>sp|Q6GDP0|COPZ_STAAR Copper chaperone CopZ OS=Staphylococcus aureus (strain MRSA252)
GN=copZ PE=3 SV=1
Length = 68
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + +++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSAEVNLENGQVSVQ 45
>sp|P0C885|COPZ_STAAB Copper chaperone CopZ OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=copZ PE=3 SV=1
Length = 68
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 1 MSQTVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVK 45
MSQ ++ MSC C AV+ L +DGV + +++L+ +V+V+
Sbjct: 1 MSQEILNVEGMSCGHCKSAVESALNNIDGVTSAEVNLENGQVSVQ 45
>sp|O14618|CCS_HUMAN Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS
PE=1 SV=1
Length = 274
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 4 TVVLKVDMSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPDAVLQTVSKAGKK 63
T+ V M+C+ C AV++ L + GV+ ++ L++Q V V + V + G++
Sbjct: 13 TLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQ 72
Query: 64 TAF 66
Sbjct: 73 AVL 75
>sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 3 QTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTV 44
+TV L + M+C C +++VL KMDGV+ ++L ++ V
Sbjct: 72 ETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q51770|MERP_PSEFL Mercuric transport protein periplasmic component OS=Pseudomonas
fluorescens GN=merP PE=3 SV=1
Length = 91
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 2 SQTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTV 44
+QTV L V M+C C VK+ + K+DGV D+ + ++ V
Sbjct: 21 TQTVTLSVPGMTCSACPITVKKAISKVDGVSKVDVTFETREAVV 64
>sp|Q6GDP1|COPA_STAAR Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MRSA252) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 3 QTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTV 44
+TV L + M+C C +++VL KMDGV+ ++L ++ V
Sbjct: 72 ETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|A6QK47|COPA_STAAE Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Newman) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 3 QTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTV 44
+TV L + M+C C +++VL KMDGV+ ++L ++ V
Sbjct: 72 ETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q5HCZ3|COPA_STAAC Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
COL) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 3 QTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTV 44
+TV L + M+C C +++VL KMDGV+ ++L ++ V
Sbjct: 72 ETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q2FV64|COPA_STAA8 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
NCTC 8325) GN=copA PE=1 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 3 QTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTV 44
+TV L + M+C C +++VL KMDGV+ ++L ++ V
Sbjct: 72 ETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 3 QTVVLKVD-MSCEGCYGAVKRVLGKMDGVETFDIDLKEQKVTV 44
+TV L + M+C C +++VL KMDGV+ ++L ++ V
Sbjct: 72 ETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.124 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,461,593
Number of Sequences: 539616
Number of extensions: 1015835
Number of successful extensions: 3050
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2932
Number of HSP's gapped (non-prelim): 143
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)