BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043511
(300 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HVQ|A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein
With Chitinase And Lysozyme Activity, And Its Complex
With An Inhibitor
pdb|1LLO|A Chain A, Hevamine A (A Plant EndochitinaseLYSOZYME) COMPLEXED WITH
Allosamidin
pdb|2HVM|A Chain A, Hevamine A At 1.8 Angstrom Resolution
Length = 273
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/273 (74%), Positives = 227/273 (83%)
Query: 28 GGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVV 87
GGIAIYWGQNGNEGTLT TC+T KY+YVNIAFLNKFGNGQTP+INLAGHCNPAAGGC +V
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 88 SDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLD 147
S+ I+SCQ +GIKVM DAKNVADYLWNNFLGG SSSRPLG AVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 148 GIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWV 207
GIDFDIE GSTL+WDDLAR+LSAYS +GKKVYLTAAPQCPFPDR+LG ALNTGLFDYVWV
Sbjct: 121 GIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 208 QFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNVLTSQVL 267
QFYNNPPCQYSSGN N+I+S+NRW +S+ GK+F SGY+PP+VL S++L
Sbjct: 181 QFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL 240
Query: 268 PQIKTSPKYGGVMLWSKFFDDQNGYSSSIRASV 300
P+IK SPKYGGVMLWSKF+DD+NGYSSSI SV
Sbjct: 241 PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>pdb|1KR0|A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag
Length = 273
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/273 (73%), Positives = 226/273 (82%)
Query: 28 GGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVV 87
GGIAIYWGQNGNEGTLT TC+T KY+YVNIAFLNKFGNGQTP+INLAGHCNPAAGGC +V
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 88 SDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLD 147
S+ I+SCQ +GIKVM DAKNVADYLWNNFLGG SSSRPLG AVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 148 GIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWV 207
GIDF IE GSTL+WDDLAR+LSAYS +GKKVYLTAAPQCPFPDR+LG ALNTGLFDYVWV
Sbjct: 121 GIDFAIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 208 QFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNVLTSQVL 267
QF+NNPPCQYSSGN N+I+S+NRW +S+ GK+F SGY+PP+VL S++L
Sbjct: 181 QFFNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL 240
Query: 268 PQIKTSPKYGGVMLWSKFFDDQNGYSSSIRASV 300
P+IK SPKYGGVMLWSKF+DD+NGYSSSI SV
Sbjct: 241 PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>pdb|1KR1|A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag
Length = 273
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/273 (73%), Positives = 225/273 (82%)
Query: 28 GGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVV 87
GGIAIYWGQNGNEGTLT TC+T KY+YVNIAFLNKFGNGQTP+INLAGHCNPAAGGC +V
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 88 SDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLD 147
S+ I+SCQ +GIKVM DAKNVADYLWNNFLGG SSSRPLG AVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 148 GIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWV 207
GIDF I GSTL+WDDLAR+LSAYS +GKKVYLTAAPQCPFPDR+LG ALNTGLFDYVWV
Sbjct: 121 GIDFAIAHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 208 QFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNVLTSQVL 267
QFYNNPPCQYSSGN N+I+S+NRW +S+ GK+F SGY+PP+VL S++L
Sbjct: 181 QFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL 240
Query: 268 PQIKTSPKYGGVMLWSKFFDDQNGYSSSIRASV 300
P+IK SPKYGGVMLWSKF+DD+NGYSSSI SV
Sbjct: 241 PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>pdb|1KQY|A Chain A, Hevamine Mutant D125aE127AY183F IN COMPLEX WITH PENTA-Nag
pdb|1KQZ|A Chain A, Hevamine Mutant D125aE127AY183F IN COMPLEX WITH TETRA-Nag
Length = 273
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/273 (73%), Positives = 225/273 (82%)
Query: 28 GGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVV 87
GGIAIYWGQNGNEGTLT TC+T KY+YVNIAFLNKFGNGQTP+INLAGHCNPAAGGC +V
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 88 SDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLD 147
S+ I+SCQ +GIKVM DAKNVADYLWNNFLGG SSSRPLG AVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 148 GIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWV 207
GIDF I GSTL+WDDLAR+LSAYS +GKKVYLTAAPQCPFPDR+LG ALNTGLFDYVWV
Sbjct: 121 GIDFAIAHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 208 QFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNVLTSQVL 267
QF+NNPPCQYSSGN N+I+S+NRW +S+ GK+F SGY+PP+VL S++L
Sbjct: 181 QFFNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL 240
Query: 268 PQIKTSPKYGGVMLWSKFFDDQNGYSSSIRASV 300
P+IK SPKYGGVMLWSKF+DD+NGYSSSI SV
Sbjct: 241 PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>pdb|2GSJ|A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of
Ppl2, A Novel Chimerolectin From Parkia Platycephala
Seeds Exhibiting Endochitinolytic Activity
Length = 271
Score = 334 bits (856), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 163/273 (59%), Positives = 197/273 (72%), Gaps = 2/273 (0%)
Query: 28 GGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVV 87
GGI +YWGQNG EGTLTSTC +G Y VNIAFL++FG G+ P+INLAGHC+PA GCR V
Sbjct: 1 GGIVVYWGQNGGEGTLTSTCESGLYQIVNIAFLSQFGGGRRPQINLAGHCDPANNGCRTV 60
Query: 88 SDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLD 147
SD I++CQ RGIKVM DA++VADY+WNNFLGG SSSRPLG AVLD
Sbjct: 61 SDGIRACQRRGIKVMLSIGGGAGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLD 120
Query: 148 GIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWV 207
G+DFDIE G ++D LAR LS ++ GKKV+L+AAPQCPFPD+ L AL+TGLFDYVWV
Sbjct: 121 GVDFDIEHGGA-YYDALARRLSEHNRGGKKVFLSAAPQCPFPDQSLNKALSTGLFDYVWV 179
Query: 208 QFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNVLTSQVL 267
QFYNNP C+++SGN N +S+N+W SS N K + SGY+PP L +QVL
Sbjct: 180 QFYNNPQCEFNSGNPSNFRNSWNKWTSSF-NAKFYVGLPASPEAAGSGYVPPQQLINQVL 238
Query: 268 PQIKTSPKYGGVMLWSKFFDDQNGYSSSIRASV 300
P +K SPKYGGVMLW +F D + YSS I+ SV
Sbjct: 239 PFVKRSPKYGGVMLWDRFNDLKTKYSSKIKPSV 271
>pdb|3D5H|A Chain A, Crystal Structure Of Haementhin From Haemanthus
Multiflorus At 2.0a Resolution: Formation Of A Novel
Loop On A Tim Barrel Fold And Its Functional
Significance
pdb|3HU7|A Chain A, Structural Characterization And Binding Studies Of A Plant
Pathogenesis Related Protein Heamanthin From Haemanthus
Multiflorus Reveal Its Dual Inhibitory Effects Against
Xylanase And Alpha-Amylase
pdb|3M7S|A Chain A, Crystal Structure Of The Complex Of Xylanase Gh-11 And
Alpha Amylase Inhibitor Protein With Cellobiose At 2.4 A
Resolution
pdb|3OIH|A Chain A, Crystal Structure Of The Complex Of Xylanase-Alpha-Amylase
Inhibitor Protein (Xaip-I) With Trehalose At 1.87 A
Resolution
Length = 272
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 160/269 (59%), Gaps = 8/269 (2%)
Query: 30 IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSD 89
IA+YWGQN +E +L +TC TG YAYV I FLN FG GQTP ++++GH +P+ +
Sbjct: 5 IAVYWGQNFDERSLEATCDTGNYAYVIIGFLNTFGGGQTPALDISGH-SPSG-----LEP 58
Query: 90 AIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFL--GGTSSSRPLGAAVLD 147
IK CQS+ +KV+ DA ++A YL+NNFL G S +RP G AVLD
Sbjct: 59 QIKHCQSKNVKVLLSIGGPKGPYSLDSRSDANDLAVYLFNNFLLPPGHSENRPFGNAVLD 118
Query: 148 GIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWV 207
GIDF IE G + LA LS++ G + LTAAPQC +PD LG +N+ FD +WV
Sbjct: 119 GIDFHIEHGGPSQYQLLANILSSFRLAGTEFALTAAPQCVYPDPNLGTVINSATFDAIWV 178
Query: 208 QFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNVLTSQVL 267
QFYNNP C YSSGN + L++++ W+ R K+F SGY+PP + V
Sbjct: 179 QFYNNPQCSYSSGNAEALMNAWREWSMKARTKKVFLGFPAHPDAAGSGYMPPEKVKFHVF 238
Query: 268 PQIKTSPKYGGVMLWSKFFDDQNGYSSSI 296
P K S K+GG+MLW ++D + +SS I
Sbjct: 239 PAAKKSYKFGGIMLWDSYWDTVSNFSSKI 267
>pdb|3O9N|A Chain A, Crystal Structure Of A New Form Of Xylanase-A-Amylase
Inhibitor Protein(Xaip-Iii) At 2.4 A Resolution
Length = 272
Score = 224 bits (571), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/269 (43%), Positives = 160/269 (59%), Gaps = 8/269 (2%)
Query: 30 IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSD 89
IA+YWGQN +E +L +TC +G YAYV I FLN FG GQTP ++++GH +P+ +
Sbjct: 5 IAVYWGQNFDERSLEATCDSGNYAYVIIGFLNTFGGGQTPALDISGH-SPSG-----LEP 58
Query: 90 AIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFL--GGTSSSRPLGAAVLD 147
IK CQS+ +KV+ DA ++A YL+NNFL G S + P G AVLD
Sbjct: 59 QIKHCQSKNVKVLLSIGGPAGPYSLDSRSDANDLAVYLFNNFLLPPGHSENNPFGNAVLD 118
Query: 148 GIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWV 207
GIDF IE G + LA LS++ +G + LTAAPQC +PD LG +N+ FD +WV
Sbjct: 119 GIDFHIEHGGPSQYQLLANILSSFRLKGTEFALTAAPQCVYPDPNLGTVINSATFDAIWV 178
Query: 208 QFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNVLTSQVL 267
QFYNNP C YSSGN + L++++ W+ R K+F SGY+PP + V
Sbjct: 179 QFYNNPQCSYSSGNAEALMNAWREWSMKARTKKVFLGFPAHPDAAGSGYMPPAKVKFHVF 238
Query: 268 PQIKTSPKYGGVMLWSKFFDDQNGYSSSI 296
P K S K+GG+MLW ++D + +S+ I
Sbjct: 239 PAAKKSYKFGGIMLWDSYWDTVSQFSNKI 267
>pdb|3MU7|A Chain A, Crystal Structure Of The Xylanase And Alpha-Amylase
Inhibitor Protein (Xaip-Ii) From Scadoxus Multiflorus At
1.2 A Resolution
Length = 273
Score = 220 bits (561), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 157/274 (57%), Gaps = 9/274 (3%)
Query: 26 GAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCR 85
G+ IA+YWGQ+ +E +L +TC +G YAYV I FLN FG GQTP ++++GH +
Sbjct: 1 GSLDIAVYWGQSFDERSLEATCDSGNYAYVIIGFLNTFGGGQTPALDISGHS------PK 54
Query: 86 VVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFL---GGTSSSRPLG 142
+ IK CQS+ +KV+ DA ++A YL NFL GTS SRP G
Sbjct: 55 GLEPQIKHCQSKNVKVLLSIGGPAGPYSLDSRNDANDLAVYLHKNFLLPPAGTSESRPFG 114
Query: 143 AAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLF 202
AVLDGIDF IE G + LA LS++ G + LTAAPQC +PD LG +N+ F
Sbjct: 115 NAVLDGIDFHIEHGGPSQYQLLANILSSFRLSGSEFALTAAPQCVYPDPNLGTVINSATF 174
Query: 203 DYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNVL 262
D +WVQFYNNP C YS+ N L++++ W+ R K+F SGY+PP +
Sbjct: 175 DAIWVQFYNNPQCSYSASNASALMNAWKEWSMKARTDKVFLGFPAHPDAAGSGYMPPTKV 234
Query: 263 TSQVLPQIKTSPKYGGVMLWSKFFDDQNGYSSSI 296
V P + S K+GG+MLW ++D + +S+ I
Sbjct: 235 KFSVFPNAQDSTKFGGIMLWDSYWDTVSQFSNKI 268
>pdb|1CNV|A Chain A, Crystal Structure Of Concanavalin B At 1.65 A Resolution
Length = 299
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 145/275 (52%), Gaps = 10/275 (3%)
Query: 30 IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFG-NGQTPEINLAGHCNPAAGG-CRVV 87
IA+YWGQ +G L TC T Y V I+FL+KFG + PE+ L G C P+ G C +
Sbjct: 7 IAVYWGQR-EDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFL 65
Query: 88 SDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLD 147
IK CQ G+KV AK++A+YL FL PLG LD
Sbjct: 66 ESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG-PLGKVALD 124
Query: 148 GIDFDIEQG-STLHWDDLARFLSAYSSRGKKVYL-TAAPQCPFPDRFLGAALNTGLFDYV 205
GI FDI++ L+WD+L L + +L +AAP C PD +L A+ T FDY+
Sbjct: 125 GIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTRHFDYI 184
Query: 206 WVQFYNNPPCQYSSGNTQNLISSFNRWASSL--RNGKLFXXXXXXXXXXX-SGYIPPNVL 262
+V+FYN+ CQYS+GN Q + +++ W S+ R+ LF GYIPP+ L
Sbjct: 185 FVRFYNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSAL 244
Query: 263 TSQVLPQI-KTSPKYGGVMLWSKFFDDQNGYSSSI 296
QVLP + +Y G+ LW++ D + GYS++I
Sbjct: 245 IGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNI 279
>pdb|2UY2|A Chain A, Sccts1_apo Crystal Structure
pdb|2UY3|A Chain A, Sccts1_8-Chlorotheophylline Crystal Structure
pdb|2UY4|A Chain A, Sccts1_acetazolamide Crystal Structure
pdb|2UY5|A Chain A, Sccts1_kinetin Crystal Structure
Length = 294
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 12/261 (4%)
Query: 30 IAIYWGQN--GNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGG---- 83
IA+YWGQN G + +L + C + ++FLN+F T +N A C+
Sbjct: 8 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQF---PTLGLNFANACSDTFSDGLLH 64
Query: 84 CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGT-SSSRPLG 142
C +++ I++CQS G KV+ A+ A LW+ F GT +S RP
Sbjct: 65 CTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFD 124
Query: 143 AAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGL 201
+AV+DG DFDIE + + + LA L + G K+ YL+AAPQCP+PD +G L
Sbjct: 125 SAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENAD 184
Query: 202 FDYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFXXXXXXXXXXXSGYIPPNV 261
D+ ++QFYNN C S + ++ + S +N KLF SGYI
Sbjct: 185 IDFAFIQFYNN-YCSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAAGSGYISDTS 243
Query: 262 LTSQVLPQIKTSPKYGGVMLW 282
L + I +S +GG+ LW
Sbjct: 244 LLESTIADIASSSSFGGIALW 264
>pdb|1OM0|A Chain A, Crystal Structure Of Xylanase Inhibitor Protein (Xip-I)
From Wheat
pdb|1TA3|A Chain A, Crystal Structure Of Xylanase (Gh10) In Complex With
Inhibitor (Xip)
pdb|1TE1|A Chain A, Crystal Structure Of Family 11 Xylanase In Complex With
Inhibitor (xip-i)
Length = 274
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 24/280 (8%)
Query: 28 GGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVV 87
G + ++WG+N EG+L C +G Y V ++FL+ FG ++L+GH + G
Sbjct: 6 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA---- 61
Query: 88 SDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS--RPLGAAV 145
IK CQS+G+ V A ++ D+LWN++ GG+ S RP G A
Sbjct: 62 --DIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAW 119
Query: 146 LDGIDFDIEQGSTL-HWDDLARFLSAYSSR---GKKVYLTAAPQCPFPD-RFLGAALNTG 200
LDG+D +E G+ +D LA L+ ++ R GK ++LTA +C +P +G AL TG
Sbjct: 120 LDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATG 179
Query: 201 LFDYVWVQFYNNPP-CQYSSGNTQNL--ISSFNRWASSLRNGKLFXXXXXXXXXXXSGYI 257
+F+ V V+ Y + C QNL S+++W ++ + + ++
Sbjct: 180 IFERVHVRTYESDKWCN------QNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQ--WV 231
Query: 258 PPNVLTSQVLPQIKTSPKYGGVMLWSKFFDDQNGYSSSIR 297
P + V P + YGG+MLW ++FD Q YSS I+
Sbjct: 232 HPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIK 271
>pdb|2XVN|A Chain A, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
pdb|2XVN|B Chain B, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
pdb|2XVN|C Chain C, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
Length = 309
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 30 IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGN---GQTPEINLAGHCNPAA----- 81
+AIYWGQ N+ L+ C +NI F+N F + G P N C+ +
Sbjct: 3 LAIYWGQGPNQLRLSHFCQETSLDIINIGFINYFPDMSPGHWPGSNFGNQCDGSVYVTND 62
Query: 82 -------GGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXD-AKNVADYLWNNF-- 131
GC + + I CQ+ G KV+ D A A +LW F
Sbjct: 63 GVVTKLLSGCHQIMEDIPICQAAGKKVLLSIGGAYPPDQSILSEDSAVAFATFLWGAFGP 122
Query: 132 -LGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSR--GKKVYLTAAPQCPF 188
G RP G V+DG DFDIE + + Y ++ +K YL+AAPQC
Sbjct: 123 VAEGWEGPRPFGDVVVDGFDFDIEHNGGFGYATMVNTFRQYFNQVPERKFYLSAAPQCII 182
Query: 189 PDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLIS-SFNRW-----ASSLRNGKLF 242
PD L A+ FD++W+Q+YN C S +L + +F+ W AS+ ++ KL+
Sbjct: 183 PDAQLSDAIFNAAFDFIWIQYYNTAACSAKSFIDTSLGTFNFDAWVTVLKASASKDAKLY 242
Query: 243 XXXXXXXXXXXSG-YIPPNVLTSQVLPQIKTSPK-YGGVMLWS 283
G Y+ P+ + S V + P +GG+MLW
Sbjct: 243 VGLPASETAANQGYYLTPDEVESLVSTYMDRYPDTFGGIMLWE 285
>pdb|2XUC|A Chain A, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XUC|B Chain B, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XUC|C Chain C, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XVP|A Chain A, Chia1 From Aspergillus Fumigatus, Apostructure
pdb|2XVP|B Chain B, Chia1 From Aspergillus Fumigatus, Apostructure
pdb|2XTK|A Chain A, Chia1 From Aspergillus Fumigatus In Complex With
Acetazolamide
pdb|2XTK|B Chain B, Chia1 From Aspergillus Fumigatus In Complex With
Acetazolamide
Length = 310
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 30 IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGN---GQTPEINLAGHCNPAA----- 81
+AIYWGQ N+ L+ C +NI F+N F + G P N C+ +
Sbjct: 4 LAIYWGQGPNQLRLSHFCQETSLDIINIGFINYFPDMSPGHWPGSNFGNQCDGSVYVTND 63
Query: 82 -------GGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXD-AKNVADYLWNNF-- 131
GC + + I CQ+ G KV+ D A A +LW F
Sbjct: 64 GVVTKLLSGCHQIMEDIPICQAAGKKVLLSIGGAYPPDQSILSEDSAVAFATFLWGAFGP 123
Query: 132 -LGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSR--GKKVYLTAAPQCPF 188
G RP G V+DG DFDIE + + Y ++ +K YL+AAPQC
Sbjct: 124 VAEGWEGPRPFGDVVVDGFDFDIEHNGGFGYATMVNTFRQYFNQVPERKFYLSAAPQCII 183
Query: 189 PDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLIS-SFNRW-----ASSLRNGKLF 242
PD L A+ FD++W+Q+YN C S +L + +F+ W AS+ ++ KL+
Sbjct: 184 PDAQLSDAIFNAAFDFIWIQYYNTAACSAKSFIDTSLGTFNFDAWVTVLKASASKDAKLY 243
Query: 243 XXXXXXXXXXXSG-YIPPNVLTSQVLPQIKTSPK-YGGVMLWS 283
G Y+ P+ + S V + P +GG+MLW
Sbjct: 244 VGLPASETAANQGYYLTPDEVESLVSTYMDRYPDTFGGIMLWE 286
>pdb|4AXN|A Chain A, Hallmarks Of Processive And Non-Processive Glycoside
Hydrolases Revealed From Computational And
Crystallographic Studies Of The Serratia Marcescens
Chitinases
pdb|4AXN|B Chain B, Hallmarks Of Processive And Non-Processive Glycoside
Hydrolases Revealed From Computational And
Crystallographic Studies Of The Serratia Marcescens
Chitinases
Length = 328
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 146 LDGIDFDIEQGS-------TLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALN 198
DG+D D+EQ + T+ L + Y+++GK ++ AP+ P+ R G L+
Sbjct: 133 FDGLDIDLEQAAIGAANNKTVLPAALKKVKDHYAAQGKNFIISMAPEFPYL-RTNGTYLD 191
Query: 199 -----TGLFDYVWVQFYN 211
G +D++ Q+YN
Sbjct: 192 YINALEGYYDFIAPQYYN 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,742,350
Number of Sequences: 62578
Number of extensions: 345207
Number of successful extensions: 776
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 726
Number of HSP's gapped (non-prelim): 18
length of query: 300
length of database: 14,973,337
effective HSP length: 98
effective length of query: 202
effective length of database: 8,840,693
effective search space: 1785819986
effective search space used: 1785819986
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)