Query 043512
Match_columns 487
No_of_seqs 337 out of 2467
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 09:34:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043512.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043512hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgk_A Phytoene dehydrogenase; 100.0 7.6E-36 2.6E-40 309.4 21.7 383 21-465 1-404 (501)
2 2vvm_A Monoamine oxidase N; FA 100.0 1E-27 3.4E-32 247.9 25.8 258 22-320 40-323 (495)
3 1s3e_A Amine oxidase [flavin-c 100.0 1.2E-26 4.2E-31 241.2 29.6 263 20-320 3-279 (520)
4 3nrn_A Uncharacterized protein 99.9 3.3E-26 1.1E-30 231.6 22.2 372 22-458 1-403 (421)
5 2yg5_A Putrescine oxidase; oxi 99.9 3.5E-25 1.2E-29 226.2 25.6 261 21-321 5-280 (453)
6 1sez_A Protoporphyrinogen oxid 99.9 5.3E-25 1.8E-29 228.0 20.8 251 19-312 11-310 (504)
7 3i6d_A Protoporphyrinogen oxid 99.9 1E-24 3.6E-29 223.6 22.3 252 21-312 5-291 (470)
8 4gde_A UDP-galactopyranose mut 99.9 4.3E-26 1.5E-30 236.7 11.8 249 15-312 4-278 (513)
9 3k7m_X 6-hydroxy-L-nicotine ox 99.9 3.5E-24 1.2E-28 217.3 24.2 254 22-320 2-270 (431)
10 3ka7_A Oxidoreductase; structu 99.9 2.6E-24 8.8E-29 217.9 21.6 236 22-313 1-255 (425)
11 1rsg_A FMS1 protein; FAD bindi 99.9 3.2E-24 1.1E-28 222.6 17.8 246 21-321 8-280 (516)
12 3lov_A Protoporphyrinogen oxid 99.9 1.1E-23 3.7E-28 216.5 19.7 253 21-312 4-291 (475)
13 2b9w_A Putative aminooxidase; 99.9 9.3E-24 3.2E-28 213.8 16.5 248 19-311 4-259 (424)
14 2ivd_A PPO, PPOX, protoporphyr 99.9 1.9E-23 6.4E-28 214.9 18.6 253 19-319 14-302 (478)
15 2iid_A L-amino-acid oxidase; f 99.9 1.8E-22 6.2E-27 208.6 19.3 270 18-321 30-310 (498)
16 1b37_A Protein (polyamine oxid 99.9 3.9E-21 1.3E-25 197.2 22.1 252 20-321 3-284 (472)
17 4gut_A Lysine-specific histone 99.9 1.6E-20 5.6E-25 201.2 23.4 255 18-321 333-599 (776)
18 2z3y_A Lysine-specific histone 99.9 8.7E-21 3E-25 201.8 21.0 78 18-100 104-182 (662)
19 2bcg_G Secretory pathway GDP d 99.9 6.9E-21 2.4E-25 194.0 18.5 254 16-310 6-300 (453)
20 2e1m_A L-glutamate oxidase; L- 99.9 1.4E-20 4.8E-25 184.8 19.9 281 18-307 41-370 (376)
21 3nks_A Protoporphyrinogen oxid 99.9 1.4E-21 4.7E-26 200.9 12.3 244 21-312 2-292 (477)
22 2xag_A Lysine-specific histone 99.8 5.1E-21 1.8E-25 206.2 15.3 78 18-100 275-353 (852)
23 1d5t_A Guanine nucleotide diss 99.8 2.1E-20 7.1E-25 189.2 18.7 254 19-311 4-291 (433)
24 3p1w_A Rabgdi protein; GDI RAB 99.8 4E-20 1.4E-24 186.6 16.2 257 18-309 17-313 (475)
25 1v0j_A UDP-galactopyranose mut 99.8 4.6E-21 1.6E-25 191.9 7.7 231 20-311 6-250 (399)
26 2jae_A L-amino acid oxidase; o 99.8 4.4E-20 1.5E-24 190.3 13.0 244 18-311 8-297 (489)
27 3hdq_A UDP-galactopyranose mut 99.8 3.8E-19 1.3E-23 176.1 13.7 227 18-310 26-263 (397)
28 2bi7_A UDP-galactopyranose mut 99.8 6.4E-19 2.2E-23 175.3 13.7 224 21-311 3-239 (384)
29 1i8t_A UDP-galactopyranose mut 99.8 2.4E-19 8.3E-24 177.3 9.5 225 22-311 2-236 (367)
30 4dsg_A UDP-galactopyranose mut 99.8 7.1E-19 2.4E-23 180.4 12.4 238 20-312 8-272 (484)
31 3qj4_A Renalase; FAD/NAD(P)-bi 99.8 7.9E-19 2.7E-23 172.3 10.3 63 249-311 104-166 (342)
32 3ayj_A Pro-enzyme of L-phenyla 99.8 3.2E-18 1.1E-22 179.7 15.4 74 21-99 56-162 (721)
33 1yvv_A Amine oxidase, flavin-c 99.7 4.6E-17 1.6E-21 159.1 19.2 161 21-311 2-163 (336)
34 1vg0_A RAB proteins geranylger 99.6 1.6E-14 5.5E-19 149.8 17.6 109 196-307 312-434 (650)
35 3kkj_A Amine oxidase, flavin-c 99.4 6.5E-13 2.2E-17 125.1 8.4 65 20-89 1-65 (336)
36 3ps9_A TRNA 5-methylaminomethy 99.4 5.2E-12 1.8E-16 134.9 15.3 64 248-311 405-474 (676)
37 3nyc_A D-arginine dehydrogenas 99.3 1.1E-12 3.9E-17 130.0 8.5 63 248-311 142-210 (381)
38 3pvc_A TRNA 5-methylaminomethy 99.3 7.8E-12 2.7E-16 133.7 13.9 64 248-311 400-470 (689)
39 3dme_A Conserved exported prot 99.3 9E-12 3.1E-16 122.8 12.5 56 256-311 149-210 (369)
40 3dje_A Fructosyl amine: oxygen 99.3 1.8E-11 6.1E-16 123.9 14.7 56 256-311 160-222 (438)
41 3v76_A Flavoprotein; structura 99.3 4E-11 1.4E-15 120.0 16.3 62 248-310 123-187 (417)
42 3oz2_A Digeranylgeranylglycero 99.2 1.2E-09 4.1E-14 108.4 22.4 38 21-63 4-41 (397)
43 2i0z_A NAD(FAD)-utilizing dehy 99.2 2.1E-11 7.3E-16 123.6 9.7 55 256-310 133-191 (447)
44 3rp8_A Flavoprotein monooxygen 99.2 8.8E-11 3E-15 117.6 13.8 44 269-312 140-183 (407)
45 2vou_A 2,6-dihydroxypyridine h 99.2 2.6E-10 8.9E-15 113.8 16.0 44 268-311 111-154 (397)
46 3nlc_A Uncharacterized protein 99.2 1.6E-10 5.6E-15 119.0 13.2 53 258-310 221-277 (549)
47 2uzz_A N-methyl-L-tryptophan o 99.2 1.2E-10 4.2E-15 115.0 11.9 54 257-311 149-205 (372)
48 2oln_A NIKD protein; flavoprot 99.1 1.3E-10 4.4E-15 116.0 10.3 53 257-310 153-208 (397)
49 4at0_A 3-ketosteroid-delta4-5a 99.1 4.8E-10 1.7E-14 115.6 14.8 41 20-65 40-80 (510)
50 2qa1_A PGAE, polyketide oxygen 99.1 4.5E-10 1.6E-14 115.3 14.4 50 262-311 114-166 (500)
51 1y56_B Sarcosine oxidase; dehy 99.1 8.7E-11 3E-15 116.5 8.7 53 257-310 149-205 (382)
52 2gf3_A MSOX, monomeric sarcosi 99.1 2.6E-10 8.9E-15 113.3 12.1 53 257-310 150-205 (389)
53 2qa2_A CABE, polyketide oxygen 99.1 5.2E-10 1.8E-14 114.9 14.4 50 262-311 115-167 (499)
54 3cgv_A Geranylgeranyl reductas 99.1 5.1E-10 1.8E-14 111.4 13.9 47 264-310 112-162 (397)
55 2xdo_A TETX2 protein; tetracyc 99.1 6.2E-10 2.1E-14 111.1 14.5 53 259-311 130-183 (398)
56 1ryi_A Glycine oxidase; flavop 99.1 3E-10 1E-14 112.6 12.0 54 257-311 164-220 (382)
57 2gqf_A Hypothetical protein HI 99.1 9.1E-10 3.1E-14 109.7 14.9 54 256-310 108-168 (401)
58 4ap3_A Steroid monooxygenase; 99.1 1.6E-10 5.4E-15 119.9 9.6 49 260-308 105-157 (549)
59 3gwf_A Cyclohexanone monooxyge 99.1 3.8E-10 1.3E-14 116.8 11.4 51 259-309 92-146 (540)
60 2gag_B Heterotetrameric sarcos 99.1 1.6E-10 5.4E-15 115.5 8.1 52 258-310 175-230 (405)
61 1y0p_A Fumarate reductase flav 99.1 3.4E-09 1.2E-13 110.8 17.6 40 21-65 126-165 (571)
62 1pj5_A N,N-dimethylglycine oxi 99.0 3.3E-10 1.1E-14 123.8 9.7 54 257-311 151-208 (830)
63 1qo8_A Flavocytochrome C3 fuma 99.0 2.8E-09 9.7E-14 111.3 16.4 41 20-65 120-160 (566)
64 3alj_A 2-methyl-3-hydroxypyrid 99.0 2.1E-09 7.1E-14 106.5 13.6 45 264-311 117-161 (379)
65 1w4x_A Phenylacetone monooxyge 99.0 6.5E-10 2.2E-14 115.5 10.1 43 18-65 13-55 (542)
66 2x3n_A Probable FAD-dependent 99.0 5.2E-10 1.8E-14 111.6 8.7 46 266-311 119-167 (399)
67 3axb_A Putative oxidoreductase 99.0 7.2E-10 2.5E-14 112.4 8.8 54 257-311 181-255 (448)
68 4hb9_A Similarities with proba 99.0 2.5E-09 8.5E-14 106.9 12.5 54 258-311 113-167 (412)
69 3uox_A Otemo; baeyer-villiger 99.0 8.3E-10 2.9E-14 114.3 9.1 40 20-64 8-47 (545)
70 3nix_A Flavoprotein/dehydrogen 99.0 3.2E-09 1.1E-13 106.6 12.6 47 264-310 116-166 (421)
71 4a9w_A Monooxygenase; baeyer-v 99.0 1.6E-09 5.5E-14 105.9 10.1 49 261-310 83-132 (357)
72 3da1_A Glycerol-3-phosphate de 99.0 3.3E-09 1.1E-13 110.4 12.6 55 257-311 170-233 (561)
73 1k0i_A P-hydroxybenzoate hydro 99.0 1E-09 3.4E-14 109.4 8.2 46 266-311 115-164 (394)
74 1rp0_A ARA6, thiazole biosynth 98.9 3.8E-09 1.3E-13 100.2 11.5 38 21-63 39-77 (284)
75 3ihg_A RDME; flavoenzyme, anth 98.9 2.8E-09 9.5E-14 110.6 11.1 47 264-310 130-183 (535)
76 2gv8_A Monooxygenase; FMO, FAD 98.9 3.8E-09 1.3E-13 107.1 11.1 51 260-310 121-177 (447)
77 3c96_A Flavin-containing monoo 98.9 4.7E-09 1.6E-13 105.1 10.6 37 21-62 4-41 (410)
78 3fmw_A Oxygenase; mithramycin, 98.9 1.4E-09 4.8E-14 113.3 6.3 47 264-310 158-207 (570)
79 3ab1_A Ferredoxin--NADP reduct 98.9 3.8E-09 1.3E-13 103.7 8.7 45 265-309 85-130 (360)
80 2zbw_A Thioredoxin reductase; 98.9 5.2E-09 1.8E-13 101.6 9.3 45 265-309 76-120 (335)
81 3e1t_A Halogenase; flavoprotei 98.9 2.5E-09 8.4E-14 110.4 7.2 48 264-311 121-173 (512)
82 3i3l_A Alkylhalidase CMLS; fla 98.9 4.1E-09 1.4E-13 110.0 8.9 47 264-310 138-188 (591)
83 3o0h_A Glutathione reductase; 98.8 4.4E-08 1.5E-12 100.2 16.1 52 258-309 236-287 (484)
84 3s5w_A L-ornithine 5-monooxyge 98.8 1.7E-08 5.9E-13 102.7 13.0 52 257-308 130-190 (463)
85 3lzw_A Ferredoxin--NADP reduct 98.8 1.9E-09 6.5E-14 104.4 5.5 44 265-309 78-122 (332)
86 3jsk_A Cypbp37 protein; octame 98.8 1.8E-08 6.3E-13 96.8 12.2 39 21-64 79-119 (344)
87 3f8d_A Thioredoxin reductase ( 98.8 1.2E-08 3.9E-13 98.4 10.5 44 265-309 81-124 (323)
88 2bry_A NEDD9 interacting prote 98.8 1.8E-08 6.1E-13 103.3 12.2 41 18-63 89-129 (497)
89 3d1c_A Flavin-containing putat 98.8 1.1E-08 3.8E-13 100.7 9.9 50 260-310 94-143 (369)
90 3atr_A Conserved archaeal prot 98.8 1.6E-08 5.6E-13 102.6 11.3 47 265-311 111-163 (453)
91 2gmh_A Electron transfer flavo 98.8 1.6E-08 5.4E-13 105.7 11.3 42 18-64 32-79 (584)
92 3itj_A Thioredoxin reductase 1 98.8 6.9E-09 2.4E-13 100.7 7.9 45 264-309 94-141 (338)
93 2wdq_A Succinate dehydrogenase 98.8 5.1E-08 1.8E-12 101.9 14.8 40 20-64 6-45 (588)
94 1d4d_A Flavocytochrome C fumar 98.8 5.4E-08 1.9E-12 101.5 14.9 41 20-65 125-165 (572)
95 3lxd_A FAD-dependent pyridine 98.8 1.5E-08 5.2E-13 101.6 10.0 54 257-310 197-251 (415)
96 2rgh_A Alpha-glycerophosphate 98.8 4.7E-08 1.6E-12 101.9 13.3 55 257-311 188-251 (571)
97 2zxi_A TRNA uridine 5-carboxym 98.7 1.8E-08 6.1E-13 104.3 8.5 46 264-310 133-180 (637)
98 2bs2_A Quinol-fumarate reducta 98.7 1.1E-07 3.8E-12 100.3 14.6 54 257-310 158-220 (660)
99 3iwa_A FAD-dependent pyridine 98.7 2.7E-08 9.3E-13 101.5 9.4 54 257-310 205-258 (472)
100 2q0l_A TRXR, thioredoxin reduc 98.7 6.4E-08 2.2E-12 92.8 11.1 44 265-309 70-113 (311)
101 2h88_A Succinate dehydrogenase 98.7 2.4E-07 8.1E-12 97.1 15.9 54 257-310 155-217 (621)
102 2gjc_A Thiazole biosynthetic e 98.7 7.3E-08 2.5E-12 92.1 10.8 38 22-64 66-105 (326)
103 2cul_A Glucose-inhibited divis 98.7 2.7E-07 9.3E-12 84.6 14.3 49 264-313 78-128 (232)
104 2xve_A Flavin-containing monoo 98.7 5.2E-08 1.8E-12 99.1 10.1 44 21-66 2-48 (464)
105 3fbs_A Oxidoreductase; structu 98.7 2.4E-07 8.3E-12 87.9 14.2 41 268-309 71-111 (297)
106 2r0c_A REBC; flavin adenine di 98.7 5.1E-08 1.7E-12 101.3 10.1 37 21-62 26-62 (549)
107 2ywl_A Thioredoxin reductase r 98.7 1.8E-07 6E-12 82.1 12.1 44 264-309 66-109 (180)
108 2dkh_A 3-hydroxybenzoate hydro 98.7 2.9E-08 9.9E-13 105.0 8.1 40 18-61 29-68 (639)
109 3fg2_P Putative rubredoxin red 98.7 5.6E-08 1.9E-12 97.0 9.5 54 257-310 187-241 (404)
110 3ces_A MNMG, tRNA uridine 5-ca 98.6 3.9E-08 1.3E-12 102.2 6.9 48 263-311 133-182 (651)
111 1kf6_A Fumarate reductase flav 98.6 7.8E-07 2.7E-11 93.1 16.6 54 257-310 134-197 (602)
112 3fpz_A Thiazole biosynthetic e 98.6 1.8E-08 6.1E-13 97.6 3.8 43 21-66 65-107 (326)
113 1jnr_A Adenylylsulfate reducta 98.6 2.1E-07 7.2E-12 98.3 12.1 53 258-310 155-218 (643)
114 1fl2_A Alkyl hydroperoxide red 98.6 1.5E-07 5.1E-12 90.1 9.2 46 264-309 66-114 (310)
115 2weu_A Tryptophan 5-halogenase 98.6 2E-07 6.7E-12 96.1 10.6 47 264-311 183-231 (511)
116 3cp8_A TRNA uridine 5-carboxym 98.6 6.2E-08 2.1E-12 100.7 6.7 48 263-311 126-175 (641)
117 2aqj_A Tryptophan halogenase, 98.6 2.9E-07 9.8E-12 95.5 11.8 47 264-311 175-223 (538)
118 2e5v_A L-aspartate oxidase; ar 98.5 5.1E-07 1.7E-11 91.9 13.0 36 23-64 1-36 (472)
119 4gcm_A TRXR, thioredoxin reduc 98.5 7E-08 2.4E-12 92.6 5.0 41 20-66 5-45 (312)
120 2e4g_A Tryptophan halogenase; 98.5 3.6E-07 1.2E-11 94.9 10.3 49 262-311 202-253 (550)
121 1hyu_A AHPF, alkyl hydroperoxi 98.4 7.1E-07 2.4E-11 92.0 10.9 46 265-310 278-326 (521)
122 2pyx_A Tryptophan halogenase; 98.4 2E-06 6.9E-11 88.8 13.7 53 258-311 179-234 (526)
123 3klj_A NAD(FAD)-dependent dehy 98.4 7.4E-07 2.5E-11 88.2 9.3 41 266-308 74-114 (385)
124 1c0p_A D-amino acid oxidase; a 98.3 5.2E-07 1.8E-11 88.5 6.1 36 20-60 5-40 (363)
125 4a5l_A Thioredoxin reductase; 98.3 3.2E-07 1.1E-11 87.9 4.5 35 20-59 3-37 (314)
126 4fk1_A Putative thioredoxin re 98.3 3.8E-07 1.3E-11 87.2 5.0 39 21-65 6-44 (304)
127 3urh_A Dihydrolipoyl dehydroge 98.3 3.5E-07 1.2E-11 93.7 4.8 42 20-66 24-65 (491)
128 2vdc_G Glutamate synthase [NAD 98.3 5.8E-07 2E-11 90.9 5.8 42 19-65 120-161 (456)
129 1pn0_A Phenol 2-monooxygenase; 98.3 1.4E-06 4.7E-11 92.4 8.7 40 21-60 8-47 (665)
130 1mo9_A ORF3; nucleotide bindin 98.2 7.8E-07 2.7E-11 91.8 5.8 45 17-66 39-83 (523)
131 3l8k_A Dihydrolipoyl dehydroge 98.2 3.9E-07 1.3E-11 92.7 3.5 54 257-310 214-272 (466)
132 3cty_A Thioredoxin reductase; 98.2 6.4E-07 2.2E-11 86.1 4.6 41 20-66 15-55 (319)
133 4b63_A L-ornithine N5 monooxyg 98.2 8.7E-07 3E-11 90.8 5.8 53 256-308 147-212 (501)
134 3g3e_A D-amino-acid oxidase; F 98.2 6E-07 2E-11 87.7 4.1 37 22-63 1-43 (351)
135 2qae_A Lipoamide, dihydrolipoy 98.2 6.6E-07 2.2E-11 91.1 4.4 41 21-66 2-42 (468)
136 3r9u_A Thioredoxin reductase; 98.2 5.7E-07 2E-11 86.1 3.7 52 257-308 186-242 (315)
137 4dna_A Probable glutathione re 98.2 6E-07 2.1E-11 91.2 4.0 51 258-309 215-267 (463)
138 3k30_A Histamine dehydrogenase 98.2 8.8E-07 3E-11 94.5 5.5 44 18-66 388-431 (690)
139 2q7v_A Thioredoxin reductase; 98.2 8.3E-07 2.8E-11 85.6 4.7 41 20-66 7-47 (325)
140 3lad_A Dihydrolipoamide dehydr 98.2 9.4E-07 3.2E-11 90.1 5.1 52 258-309 225-279 (476)
141 1dxl_A Dihydrolipoamide dehydr 98.2 1E-06 3.4E-11 89.8 4.9 42 19-65 4-45 (470)
142 1zmd_A Dihydrolipoyl dehydroge 98.2 7.1E-07 2.4E-11 91.0 3.7 42 19-65 4-45 (474)
143 2hqm_A GR, grase, glutathione 98.1 9.2E-07 3.1E-11 90.2 3.8 53 257-309 229-284 (479)
144 3c4n_A Uncharacterized protein 98.1 1E-06 3.5E-11 87.9 4.0 53 257-310 172-236 (405)
145 3c4a_A Probable tryptophan hyd 98.1 1.5E-06 5.3E-11 85.8 5.3 35 22-61 1-37 (381)
146 3ihm_A Styrene monooxygenase A 98.1 1.3E-06 4.3E-11 87.9 4.6 37 18-59 19-55 (430)
147 2v3a_A Rubredoxin reductase; a 98.1 2.5E-05 8.5E-10 77.1 13.9 46 265-310 198-243 (384)
148 2qcu_A Aerobic glycerol-3-phos 98.1 1.6E-06 5.4E-11 89.0 5.2 55 257-311 149-211 (501)
149 2yqu_A 2-oxoglutarate dehydrog 98.1 1.3E-06 4.3E-11 88.6 4.3 50 261-310 215-264 (455)
150 1xdi_A RV3303C-LPDA; reductase 98.1 8.9E-07 3.1E-11 90.8 3.2 55 256-310 225-279 (499)
151 3dk9_A Grase, GR, glutathione 98.1 1.1E-06 3.8E-11 89.6 3.7 40 20-65 19-58 (478)
152 3qfa_A Thioredoxin reductase 1 98.1 1.8E-06 6.1E-11 89.0 5.2 41 20-65 31-79 (519)
153 1zk7_A HGII, reductase, mercur 98.1 2E-06 6.7E-11 87.5 5.3 51 259-310 221-271 (467)
154 1ojt_A Surface protein; redox- 98.1 1.2E-06 4E-11 89.6 3.4 53 257-309 229-285 (482)
155 1o94_A Tmadh, trimethylamine d 98.1 2.6E-06 8.8E-11 91.4 6.1 43 19-66 387-429 (729)
156 1lvl_A Dihydrolipoamide dehydr 98.1 1.3E-06 4.4E-11 88.6 3.5 41 20-66 4-44 (458)
157 3dgz_A Thioredoxin reductase 2 98.1 1.6E-06 5.5E-11 88.6 4.3 42 19-65 4-53 (488)
158 1v59_A Dihydrolipoamide dehydr 98.1 1.7E-06 5.8E-11 88.2 4.1 40 21-65 5-44 (478)
159 2a87_A TRXR, TR, thioredoxin r 98.1 1.9E-06 6.3E-11 83.5 4.0 42 19-66 12-53 (335)
160 2r9z_A Glutathione amide reduc 98.1 2E-06 7E-11 87.3 4.5 52 258-309 211-263 (463)
161 3dgh_A TRXR-1, thioredoxin red 98.1 2.2E-06 7.7E-11 87.5 4.7 52 258-309 231-288 (483)
162 1ebd_A E3BD, dihydrolipoamide 98.0 2.1E-06 7.1E-11 87.0 4.0 53 258-310 215-270 (455)
163 1onf_A GR, grase, glutathione 98.0 2.4E-06 8.4E-11 87.6 4.5 53 258-310 221-275 (500)
164 1ges_A Glutathione reductase; 98.0 1.9E-06 6.4E-11 87.2 3.6 52 258-309 212-264 (450)
165 3ic9_A Dihydrolipoamide dehydr 98.0 2.4E-06 8.2E-11 87.4 4.0 39 21-65 8-46 (492)
166 1vdc_A NTR, NADPH dependent th 98.0 2.5E-06 8.6E-11 82.4 3.8 41 21-66 8-52 (333)
167 3pl8_A Pyranose 2-oxidase; sub 98.0 3.9E-06 1.3E-10 88.1 5.1 39 21-64 46-84 (623)
168 1ps9_A 2,4-dienoyl-COA reducta 98.0 5.8E-06 2E-10 88.0 6.4 42 19-65 371-412 (671)
169 2yqu_A 2-oxoglutarate dehydrog 98.0 5.6E-05 1.9E-09 76.4 13.4 36 21-61 167-202 (455)
170 1trb_A Thioredoxin reductase; 98.0 3.1E-06 1E-10 81.2 3.8 40 21-66 5-44 (320)
171 2eq6_A Pyruvate dehydrogenase 98.0 4.9E-05 1.7E-09 77.0 12.7 45 265-309 221-270 (464)
172 3oc4_A Oxidoreductase, pyridin 98.0 4E-06 1.4E-10 84.8 4.6 53 257-310 192-244 (452)
173 2a8x_A Dihydrolipoyl dehydroge 98.0 3.3E-06 1.1E-10 85.7 3.9 53 257-309 215-270 (464)
174 2eq6_A Pyruvate dehydrogenase 97.9 5.1E-06 1.7E-10 84.4 4.1 39 21-65 6-44 (464)
175 3g5s_A Methylenetetrahydrofola 97.9 9.9E-06 3.4E-10 78.4 5.5 37 22-63 2-38 (443)
176 3ics_A Coenzyme A-disulfide re 97.9 7.2E-06 2.5E-10 85.9 5.0 51 258-310 232-282 (588)
177 3gyx_A Adenylylsulfate reducta 97.9 5.2E-06 1.8E-10 87.5 3.7 35 21-60 22-62 (662)
178 3h28_A Sulfide-quinone reducta 97.9 9.2E-06 3.1E-10 81.6 5.2 41 21-64 2-42 (430)
179 1cjc_A Protein (adrenodoxin re 97.9 8.6E-06 2.9E-10 82.4 4.7 41 20-65 5-47 (460)
180 1gte_A Dihydropyrimidine dehyd 97.9 1E-05 3.4E-10 90.0 5.5 41 20-65 186-227 (1025)
181 1y56_A Hypothetical protein PH 97.8 5.2E-06 1.8E-10 84.9 2.7 49 262-310 265-313 (493)
182 3ef6_A Toluene 1,2-dioxygenase 97.8 0.0001 3.5E-09 73.4 12.1 47 264-310 195-241 (410)
183 2gag_A Heterotetrameric sarcos 97.8 8.8E-06 3E-10 89.8 4.7 41 21-66 128-168 (965)
184 3kd9_A Coenzyme A disulfide re 97.8 1.1E-05 3.9E-10 81.4 4.9 41 21-64 3-43 (449)
185 1fec_A Trypanothione reductase 97.8 8.1E-06 2.8E-10 83.4 3.9 53 258-310 235-288 (490)
186 1ebd_A E3BD, dihydrolipoamide 97.8 0.00012 4.2E-09 73.9 12.5 36 21-61 170-205 (455)
187 1chu_A Protein (L-aspartate ox 97.8 9.5E-06 3.2E-10 83.8 4.1 40 19-64 6-45 (540)
188 2wpf_A Trypanothione reductase 97.8 7.3E-06 2.5E-10 83.8 3.2 53 257-309 238-291 (495)
189 2gqw_A Ferredoxin reductase; f 97.8 1.5E-05 5.1E-10 79.5 5.0 50 257-310 190-239 (408)
190 1nhp_A NADH peroxidase; oxidor 97.8 0.00011 3.8E-09 74.0 11.4 37 20-61 148-184 (447)
191 4b1b_A TRXR, thioredoxin reduc 97.8 1.1E-05 3.8E-10 83.0 4.0 52 258-309 267-318 (542)
192 3ef6_A Toluene 1,2-dioxygenase 97.8 2.1E-05 7E-10 78.5 5.4 37 21-62 2-40 (410)
193 1m6i_A Programmed cell death p 97.8 1.4E-05 4.9E-10 81.6 4.3 54 257-310 229-282 (493)
194 2bc0_A NADH oxidase; flavoprot 97.7 1.8E-05 6.3E-10 80.8 5.0 51 258-310 240-291 (490)
195 3h8l_A NADH oxidase; membrane 97.7 1.6E-05 5.6E-10 79.1 4.5 50 257-310 221-270 (409)
196 2cdu_A NADPH oxidase; flavoenz 97.7 1.9E-05 6.4E-10 79.9 4.9 53 257-310 194-247 (452)
197 2r9z_A Glutathione amide reduc 97.7 0.00027 9.3E-09 71.5 13.5 35 21-60 166-200 (463)
198 1ges_A Glutathione reductase; 97.7 0.00022 7.4E-09 72.0 12.6 35 21-60 167-201 (450)
199 1nhp_A NADH peroxidase; oxidor 97.7 2.1E-05 7.1E-10 79.4 4.8 51 258-310 195-246 (447)
200 1v59_A Dihydrolipoamide dehydr 97.7 0.00014 4.9E-09 73.9 11.0 36 21-61 183-218 (478)
201 3cgb_A Pyridine nucleotide-dis 97.7 2.2E-05 7.5E-10 80.0 4.8 51 259-310 232-282 (480)
202 1lqt_A FPRA; NADP+ derivative, 97.7 1.6E-05 5.3E-10 80.4 3.5 43 21-66 3-50 (456)
203 2x8g_A Thioredoxin glutathione 97.7 2.3E-05 7.7E-10 82.2 4.9 34 19-57 105-138 (598)
204 1kdg_A CDH, cellobiose dehydro 97.7 2.2E-05 7.7E-10 81.3 4.8 37 19-60 5-41 (546)
205 3ntd_A FAD-dependent pyridine 97.7 2.2E-05 7.6E-10 81.7 4.8 54 257-310 195-267 (565)
206 1xdi_A RV3303C-LPDA; reductase 97.7 0.00026 8.8E-09 72.4 12.4 36 21-61 182-217 (499)
207 1q1r_A Putidaredoxin reductase 97.7 0.00034 1.2E-08 70.0 12.9 45 265-309 202-249 (431)
208 1q1r_A Putidaredoxin reductase 97.7 3.9E-05 1.3E-09 77.0 5.9 38 20-62 3-42 (431)
209 1zmd_A Dihydrolipoyl dehydroge 97.6 0.00028 9.5E-09 71.6 11.7 45 265-309 231-281 (474)
210 1fec_A Trypanothione reductase 97.6 0.00024 8.1E-09 72.5 11.2 36 21-61 187-225 (490)
211 3t37_A Probable dehydrogenase; 97.6 2.4E-05 8.2E-10 80.7 3.6 38 18-59 14-51 (526)
212 2gqw_A Ferredoxin reductase; f 97.6 0.00054 1.8E-08 68.1 13.2 36 21-61 145-180 (408)
213 3oc4_A Oxidoreductase, pyridin 97.6 0.00037 1.3E-08 70.3 12.0 36 21-61 147-182 (452)
214 3vrd_B FCCB subunit, flavocyto 97.6 5E-05 1.7E-09 75.3 5.5 43 266-308 214-256 (401)
215 1mo9_A ORF3; nucleotide bindin 97.6 0.00034 1.2E-08 72.0 11.7 47 264-310 265-316 (523)
216 3hyw_A Sulfide-quinone reducta 97.6 5.2E-05 1.8E-09 76.1 5.4 52 256-309 202-255 (430)
217 2hqm_A GR, grase, glutathione 97.6 0.00048 1.6E-08 70.0 12.5 35 21-60 185-219 (479)
218 1ojt_A Surface protein; redox- 97.6 0.00025 8.4E-09 72.2 10.4 36 21-61 185-220 (482)
219 2v3a_A Rubredoxin reductase; a 97.6 4.9E-05 1.7E-09 75.0 5.0 34 21-59 4-39 (384)
220 1xhc_A NADH oxidase /nitrite r 97.5 4.8E-05 1.6E-09 74.6 4.3 48 257-309 186-233 (367)
221 2qae_A Lipoamide, dihydrolipoy 97.5 0.00044 1.5E-08 70.0 11.7 46 265-310 227-276 (468)
222 2cdu_A NADPH oxidase; flavoenz 97.5 0.00078 2.7E-08 67.9 13.3 36 21-61 149-184 (452)
223 2wpf_A Trypanothione reductase 97.5 0.00051 1.7E-08 70.1 11.7 36 21-61 191-229 (495)
224 3sx6_A Sulfide-quinone reducta 97.5 6E-05 2.1E-09 75.7 4.7 38 21-60 4-41 (437)
225 2a8x_A Dihydrolipoyl dehydroge 97.5 0.00069 2.3E-08 68.5 12.3 36 21-61 171-206 (464)
226 4g6h_A Rotenone-insensitive NA 97.5 5.4E-05 1.9E-09 77.4 4.1 38 18-60 39-76 (502)
227 3ntd_A FAD-dependent pyridine 97.5 0.00074 2.5E-08 70.1 12.7 36 21-61 151-186 (565)
228 4eqs_A Coenzyme A disulfide re 97.5 6.8E-05 2.3E-09 75.3 4.6 50 256-309 190-239 (437)
229 2bc0_A NADH oxidase; flavoprot 97.5 0.00067 2.3E-08 69.1 11.9 37 20-61 193-229 (490)
230 1onf_A GR, grase, glutathione 97.5 0.00073 2.5E-08 69.0 12.1 35 21-60 176-210 (500)
231 3q9t_A Choline dehydrogenase a 97.4 6.3E-05 2.1E-09 78.0 4.0 37 19-60 4-41 (577)
232 1n4w_A CHOD, cholesterol oxida 97.4 0.0001 3.5E-09 75.4 4.6 38 20-62 4-41 (504)
233 1dxl_A Dihydrolipoamide dehydr 97.4 0.00037 1.3E-08 70.6 8.7 47 264-310 228-279 (470)
234 3qvp_A Glucose oxidase; oxidor 97.4 8.1E-05 2.8E-09 77.2 3.7 38 18-59 16-53 (583)
235 1coy_A Cholesterol oxidase; ox 97.4 0.00013 4.6E-09 74.6 5.2 40 16-60 6-45 (507)
236 3lad_A Dihydrolipoamide dehydr 97.3 0.0014 4.7E-08 66.5 12.6 35 21-60 180-214 (476)
237 3cgb_A Pyridine nucleotide-dis 97.3 0.00078 2.7E-08 68.4 10.6 37 20-61 185-221 (480)
238 1zk7_A HGII, reductase, mercur 97.3 0.0013 4.5E-08 66.5 12.0 36 21-61 176-211 (467)
239 3urh_A Dihydrolipoyl dehydroge 97.3 0.0012 4E-08 67.4 11.5 45 265-309 250-299 (491)
240 3ic9_A Dihydrolipoamide dehydr 97.3 0.0012 4.1E-08 67.3 11.2 41 269-309 229-273 (492)
241 3s5w_A L-ornithine 5-monooxyge 97.3 0.003 1E-07 63.7 13.9 44 267-310 329-377 (463)
242 1ju2_A HydroxynitrIle lyase; f 97.2 0.00016 5.4E-09 74.6 3.5 37 19-61 24-60 (536)
243 4dna_A Probable glutathione re 97.2 0.0022 7.4E-08 64.8 11.9 35 21-60 170-204 (463)
244 3itj_A Thioredoxin reductase 1 97.2 0.002 7E-08 61.6 10.8 35 21-60 173-207 (338)
245 3ics_A Coenzyme A-disulfide re 97.1 0.0022 7.4E-08 67.0 11.6 36 21-61 187-222 (588)
246 2jbv_A Choline oxidase; alcoho 97.1 0.0002 6.9E-09 74.0 3.6 36 20-60 12-48 (546)
247 4b1b_A TRXR, thioredoxin reduc 97.1 0.0046 1.6E-07 63.5 13.5 33 21-58 223-255 (542)
248 3fim_B ARYL-alcohol oxidase; A 97.1 0.00018 6E-09 74.5 2.9 37 21-61 2-38 (566)
249 1trb_A Thioredoxin reductase; 97.0 0.0033 1.1E-07 59.7 10.7 35 21-60 145-179 (320)
250 3l8k_A Dihydrolipoyl dehydroge 96.9 0.0079 2.7E-07 60.7 13.3 36 21-61 172-207 (466)
251 1gpe_A Protein (glucose oxidas 96.9 0.00061 2.1E-08 71.0 4.3 37 20-60 23-59 (587)
252 3ab1_A Ferredoxin--NADP reduct 96.7 0.0065 2.2E-07 58.9 10.3 44 266-309 214-262 (360)
253 3dgh_A TRXR-1, thioredoxin red 96.6 0.013 4.3E-07 59.5 12.2 33 21-58 187-219 (483)
254 2g1u_A Hypothetical protein TM 96.5 0.0031 1.1E-07 53.2 5.4 40 15-59 13-52 (155)
255 3fwz_A Inner membrane protein 96.3 0.0056 1.9E-07 50.6 6.1 37 18-59 4-40 (140)
256 1lss_A TRK system potassium up 96.1 0.0068 2.3E-07 49.7 5.2 34 21-59 4-37 (140)
257 3klj_A NAD(FAD)-dependent dehy 96.0 0.0045 1.5E-07 60.8 4.5 36 21-61 146-181 (385)
258 4gcm_A TRXR, thioredoxin reduc 96.0 0.0052 1.8E-07 58.2 4.8 34 22-60 146-179 (312)
259 3ic5_A Putative saccharopine d 95.8 0.0091 3.1E-07 47.2 4.7 35 20-59 4-39 (118)
260 3llv_A Exopolyphosphatase-rela 95.8 0.011 3.7E-07 48.8 5.2 34 21-59 6-39 (141)
261 1lvl_A Dihydrolipoamide dehydr 95.8 0.0074 2.5E-07 60.8 4.8 36 21-61 171-206 (458)
262 1xhc_A NADH oxidase /nitrite r 95.5 0.011 3.7E-07 57.6 5.0 36 22-62 144-179 (367)
263 3ado_A Lambda-crystallin; L-gu 95.5 0.012 4.1E-07 55.8 4.9 35 20-59 5-39 (319)
264 4a5l_A Thioredoxin reductase; 95.3 0.014 4.8E-07 55.1 4.7 34 21-59 152-185 (314)
265 1id1_A Putative potassium chan 95.3 0.023 7.8E-07 47.6 5.5 34 21-59 3-36 (153)
266 3i83_A 2-dehydropantoate 2-red 95.2 0.018 6E-07 55.0 5.2 34 21-59 2-35 (320)
267 3c85_A Putative glutathione-re 95.2 0.021 7.1E-07 49.4 5.1 34 21-59 39-73 (183)
268 3hn2_A 2-dehydropantoate 2-red 95.1 0.018 6.2E-07 54.7 4.7 34 21-59 2-35 (312)
269 2hmt_A YUAA protein; RCK, KTN, 95.0 0.023 7.7E-07 46.7 4.7 34 21-59 6-39 (144)
270 1f0y_A HCDH, L-3-hydroxyacyl-C 95.0 0.027 9.3E-07 53.1 5.7 34 21-59 15-48 (302)
271 3lk7_A UDP-N-acetylmuramoylala 95.0 0.023 7.8E-07 57.0 5.4 35 20-59 8-42 (451)
272 1m6i_A Programmed cell death p 94.9 0.061 2.1E-06 54.5 8.5 44 16-62 6-49 (493)
273 2vns_A Metalloreductase steap3 94.8 0.03 1E-06 50.0 5.0 35 20-59 27-61 (215)
274 3kd9_A Coenzyme A disulfide re 94.7 0.033 1.1E-06 55.8 5.7 36 21-61 148-183 (449)
275 1lld_A L-lactate dehydrogenase 94.7 0.03 1E-06 53.2 5.2 36 19-59 5-42 (319)
276 4e12_A Diketoreductase; oxidor 94.7 0.03 1E-06 52.3 5.0 34 21-59 4-37 (283)
277 3g0o_A 3-hydroxyisobutyrate de 94.6 0.033 1.1E-06 52.6 5.2 36 19-59 5-40 (303)
278 4eqs_A Coenzyme A disulfide re 94.6 0.029 9.8E-07 56.0 5.0 36 21-61 147-182 (437)
279 2dpo_A L-gulonate 3-dehydrogen 94.6 0.031 1.1E-06 53.1 4.9 34 21-59 6-39 (319)
280 3l4b_C TRKA K+ channel protien 94.6 0.028 9.7E-07 50.1 4.4 33 22-59 1-33 (218)
281 2raf_A Putative dinucleotide-b 94.5 0.04 1.4E-06 48.8 5.3 36 20-60 18-53 (209)
282 3d1c_A Flavin-containing putat 94.5 0.033 1.1E-06 53.9 5.1 44 266-309 226-271 (369)
283 3g17_A Similar to 2-dehydropan 94.4 0.022 7.7E-07 53.5 3.5 34 21-59 2-35 (294)
284 2x5o_A UDP-N-acetylmuramoylala 94.4 0.026 9E-07 56.3 4.2 36 21-61 5-40 (439)
285 3k6j_A Protein F01G10.3, confi 94.4 0.049 1.7E-06 54.3 6.1 35 21-60 54-88 (460)
286 2q0l_A TRXR, thioredoxin reduc 94.4 0.039 1.3E-06 51.9 5.2 35 21-60 143-177 (311)
287 3gg2_A Sugar dehydrogenase, UD 94.3 0.039 1.3E-06 55.2 5.2 33 22-59 3-35 (450)
288 1ks9_A KPA reductase;, 2-dehyd 94.3 0.043 1.5E-06 51.2 5.3 33 22-59 1-33 (291)
289 1fl2_A Alkyl hydroperoxide red 94.2 0.041 1.4E-06 51.7 4.9 35 21-60 144-178 (310)
290 4dio_A NAD(P) transhydrogenase 94.2 0.049 1.7E-06 53.1 5.4 34 21-59 190-223 (405)
291 2y0c_A BCEC, UDP-glucose dehyd 94.2 0.043 1.5E-06 55.3 5.2 35 20-59 7-41 (478)
292 1pzg_A LDH, lactate dehydrogen 94.2 0.049 1.7E-06 52.1 5.4 34 21-59 9-43 (331)
293 2ew2_A 2-dehydropantoate 2-red 94.2 0.045 1.5E-06 51.7 5.1 33 22-59 4-36 (316)
294 1z82_A Glycerol-3-phosphate de 94.1 0.046 1.6E-06 52.4 5.2 35 19-58 12-46 (335)
295 3lxd_A FAD-dependent pyridine 94.1 0.051 1.8E-06 53.7 5.6 37 21-62 152-188 (415)
296 3l6d_A Putative oxidoreductase 94.1 0.066 2.3E-06 50.5 6.1 38 17-59 5-42 (306)
297 3fg2_P Putative rubredoxin red 94.1 0.05 1.7E-06 53.6 5.4 37 21-62 142-178 (404)
298 3gwf_A Cyclohexanone monooxyge 94.1 0.04 1.4E-06 56.6 4.8 35 21-60 178-212 (540)
299 3ghy_A Ketopantoate reductase 94.0 0.051 1.7E-06 52.1 5.2 33 21-58 3-35 (335)
300 3g79_A NDP-N-acetyl-D-galactos 94.0 0.054 1.8E-06 54.4 5.4 36 20-60 17-54 (478)
301 3doj_A AT3G25530, dehydrogenas 93.9 0.062 2.1E-06 50.9 5.6 37 19-60 19-55 (310)
302 3dtt_A NADP oxidoreductase; st 93.9 0.062 2.1E-06 48.9 5.3 35 20-59 18-52 (245)
303 2xve_A Flavin-containing monoo 93.9 0.051 1.8E-06 54.6 5.2 36 21-61 197-232 (464)
304 1zcj_A Peroxisomal bifunctiona 93.9 0.069 2.4E-06 53.6 6.1 34 21-59 37-70 (463)
305 1vdc_A NTR, NADPH dependent th 93.8 0.049 1.7E-06 51.8 4.7 36 21-61 159-194 (333)
306 3uox_A Otemo; baeyer-villiger 93.8 0.044 1.5E-06 56.3 4.6 36 20-60 184-219 (545)
307 3k96_A Glycerol-3-phosphate de 93.8 0.06 2.1E-06 52.0 5.2 34 21-59 29-62 (356)
308 3dk9_A Grase, GR, glutathione 93.7 0.061 2.1E-06 54.3 5.4 35 21-60 187-221 (478)
309 2hjr_A Malate dehydrogenase; m 93.7 0.069 2.3E-06 51.0 5.4 35 20-59 13-48 (328)
310 3hwr_A 2-dehydropantoate 2-red 93.7 0.06 2.1E-06 51.1 5.1 34 20-59 18-51 (318)
311 4dll_A 2-hydroxy-3-oxopropiona 93.7 0.066 2.2E-06 50.9 5.3 36 19-59 29-64 (320)
312 2a87_A TRXR, TR, thioredoxin r 93.7 0.055 1.9E-06 51.6 4.8 35 21-60 155-189 (335)
313 2q7v_A Thioredoxin reductase; 93.7 0.057 2E-06 51.2 4.8 35 21-60 152-186 (325)
314 4ap3_A Steroid monooxygenase; 93.7 0.048 1.6E-06 56.1 4.5 35 21-60 191-225 (549)
315 3dfz_A SIRC, precorrin-2 dehyd 93.6 0.06 2E-06 48.1 4.4 35 20-59 30-64 (223)
316 3p2y_A Alanine dehydrogenase/p 93.6 0.058 2E-06 52.2 4.6 35 20-59 183-217 (381)
317 3eag_A UDP-N-acetylmuramate:L- 93.6 0.078 2.7E-06 50.6 5.5 34 21-59 4-38 (326)
318 3ktd_A Prephenate dehydrogenas 93.5 0.075 2.6E-06 50.9 5.3 39 16-59 3-41 (341)
319 1kyq_A Met8P, siroheme biosynt 93.5 0.046 1.6E-06 50.4 3.6 34 20-58 12-45 (274)
320 3pef_A 6-phosphogluconate dehy 93.4 0.076 2.6E-06 49.5 5.2 34 22-60 2-35 (287)
321 2ewd_A Lactate dehydrogenase,; 93.4 0.075 2.6E-06 50.4 5.0 34 21-59 4-38 (317)
322 4a7p_A UDP-glucose dehydrogena 93.4 0.082 2.8E-06 52.6 5.4 36 20-60 7-42 (446)
323 2qcu_A Aerobic glycerol-3-phos 93.3 0.13 4.4E-06 52.2 7.1 37 21-62 3-39 (501)
324 2zbw_A Thioredoxin reductase; 93.3 0.06 2.1E-06 51.2 4.3 35 21-60 152-186 (335)
325 3dfu_A Uncharacterized protein 93.3 0.037 1.3E-06 49.7 2.6 35 19-58 4-38 (232)
326 3qha_A Putative oxidoreductase 93.2 0.064 2.2E-06 50.4 4.2 35 21-60 15-49 (296)
327 2gv8_A Monooxygenase; FMO, FAD 93.1 0.071 2.4E-06 53.3 4.7 35 21-60 212-247 (447)
328 2a9f_A Putative malic enzyme ( 93.1 0.077 2.6E-06 51.2 4.7 35 20-59 187-222 (398)
329 1bg6_A N-(1-D-carboxylethyl)-L 93.1 0.087 3E-06 50.8 5.2 32 22-58 5-36 (359)
330 3oj0_A Glutr, glutamyl-tRNA re 93.1 0.039 1.3E-06 45.6 2.3 34 21-59 21-54 (144)
331 4ezb_A Uncharacterized conserv 93.1 0.084 2.9E-06 50.1 4.8 35 20-59 23-58 (317)
332 3cty_A Thioredoxin reductase; 93.0 0.072 2.5E-06 50.3 4.4 34 22-60 156-189 (319)
333 3mog_A Probable 3-hydroxybutyr 93.0 0.092 3.2E-06 52.9 5.3 34 21-59 5-38 (483)
334 2v6b_A L-LDH, L-lactate dehydr 93.0 0.092 3.2E-06 49.5 5.0 33 22-59 1-35 (304)
335 2h78_A Hibadh, 3-hydroxyisobut 93.0 0.091 3.1E-06 49.4 5.0 34 21-59 3-36 (302)
336 1mv8_A GMD, GDP-mannose 6-dehy 92.9 0.085 2.9E-06 52.5 4.9 33 22-59 1-33 (436)
337 1vl6_A Malate oxidoreductase; 92.8 0.092 3.1E-06 50.6 4.7 34 20-58 191-225 (388)
338 4g65_A TRK system potassium up 92.8 0.047 1.6E-06 54.8 2.8 35 20-59 2-36 (461)
339 2qyt_A 2-dehydropantoate 2-red 92.8 0.062 2.1E-06 50.8 3.5 31 22-57 9-45 (317)
340 3pdu_A 3-hydroxyisobutyrate de 92.7 0.083 2.9E-06 49.3 4.2 34 22-60 2-35 (287)
341 1t2d_A LDH-P, L-lactate dehydr 92.7 0.13 4.5E-06 48.9 5.6 34 21-59 4-38 (322)
342 3c4n_A Uncharacterized protein 92.7 0.047 1.6E-06 53.8 2.6 38 21-63 36-75 (405)
343 1txg_A Glycerol-3-phosphate de 92.6 0.086 2.9E-06 50.3 4.3 31 22-57 1-31 (335)
344 1guz_A Malate dehydrogenase; o 92.6 0.12 4E-06 49.0 5.1 35 22-59 1-35 (310)
345 2x8g_A Thioredoxin glutathione 92.6 0.1 3.5E-06 54.2 5.2 33 21-58 286-318 (598)
346 3vtf_A UDP-glucose 6-dehydroge 92.6 0.12 4.1E-06 51.2 5.2 37 18-59 18-54 (444)
347 3iwa_A FAD-dependent pyridine 92.6 0.1 3.5E-06 52.5 5.0 36 21-61 159-195 (472)
348 1x13_A NAD(P) transhydrogenase 92.5 0.12 4.2E-06 50.6 5.4 34 21-59 172-205 (401)
349 3ggo_A Prephenate dehydrogenas 92.5 0.14 4.8E-06 48.5 5.6 35 20-59 32-68 (314)
350 1hyu_A AHPF, alkyl hydroperoxi 92.5 0.087 3E-06 53.8 4.4 35 21-60 355-389 (521)
351 1evy_A Glycerol-3-phosphate de 92.4 0.077 2.6E-06 51.5 3.7 32 23-59 17-48 (366)
352 2pv7_A T-protein [includes: ch 92.4 0.14 4.6E-06 48.2 5.3 35 20-59 20-55 (298)
353 4gbj_A 6-phosphogluconate dehy 92.4 0.1 3.6E-06 48.9 4.5 36 19-59 3-38 (297)
354 4e21_A 6-phosphogluconate dehy 92.4 0.13 4.5E-06 49.6 5.2 34 21-59 22-55 (358)
355 1ur5_A Malate dehydrogenase; o 92.3 0.14 4.8E-06 48.4 5.3 34 21-59 2-36 (309)
356 2vdc_G Glutamate synthase [NAD 92.3 0.15 5E-06 51.1 5.7 36 20-60 263-299 (456)
357 1l7d_A Nicotinamide nucleotide 92.3 0.14 4.9E-06 49.9 5.5 35 20-59 171-205 (384)
358 3l9w_A Glutathione-regulated p 92.2 0.14 4.7E-06 50.6 5.2 35 20-59 3-37 (413)
359 3c24_A Putative oxidoreductase 92.2 0.16 5.4E-06 47.3 5.5 34 21-59 11-45 (286)
360 1jay_A Coenzyme F420H2:NADP+ o 92.2 0.14 4.8E-06 45.2 4.9 33 22-59 1-34 (212)
361 3qsg_A NAD-binding phosphogluc 92.2 0.11 3.6E-06 49.3 4.3 34 20-58 23-57 (312)
362 3dgz_A Thioredoxin reductase 2 92.2 0.15 5.1E-06 51.6 5.7 33 21-58 185-217 (488)
363 1vpd_A Tartronate semialdehyde 92.2 0.13 4.5E-06 48.1 4.9 34 21-59 5-38 (299)
364 4huj_A Uncharacterized protein 92.1 0.083 2.8E-06 47.2 3.3 34 21-59 23-57 (220)
365 3qfa_A Thioredoxin reductase 1 92.1 0.16 5.3E-06 51.9 5.7 33 21-58 210-242 (519)
366 3ldh_A Lactate dehydrogenase; 92.0 0.19 6.6E-06 47.6 5.8 35 20-59 20-56 (330)
367 3tl2_A Malate dehydrogenase; c 92.0 0.15 5.1E-06 48.2 5.0 33 21-58 8-41 (315)
368 3r9u_A Thioredoxin reductase; 92.0 0.28 9.7E-06 45.8 7.1 41 20-66 3-44 (315)
369 1pjc_A Protein (L-alanine dehy 92.0 0.17 5.7E-06 49.0 5.5 33 22-59 168-200 (361)
370 1nyt_A Shikimate 5-dehydrogena 91.9 0.17 5.9E-06 46.7 5.3 33 21-58 119-151 (271)
371 2wtb_A MFP2, fatty acid multif 91.9 0.16 5.5E-06 53.9 5.6 34 21-59 312-345 (725)
372 3gt0_A Pyrroline-5-carboxylate 91.9 0.17 5.8E-06 46.0 5.1 34 21-59 2-39 (247)
373 3o0h_A Glutathione reductase; 91.9 0.16 5.5E-06 51.3 5.4 36 21-61 191-226 (484)
374 2p4q_A 6-phosphogluconate dehy 91.9 0.16 5.4E-06 51.4 5.3 36 19-59 8-43 (497)
375 3pid_A UDP-glucose 6-dehydroge 91.9 0.15 5.1E-06 50.4 5.0 37 17-59 32-68 (432)
376 2o3j_A UDP-glucose 6-dehydroge 91.8 0.12 4.1E-06 52.1 4.4 33 21-58 9-43 (481)
377 2f1k_A Prephenate dehydrogenas 91.8 0.17 5.6E-06 46.9 5.1 33 22-59 1-33 (279)
378 1y56_A Hypothetical protein PH 91.8 0.28 9.4E-06 49.7 7.1 40 21-66 108-147 (493)
379 1cjc_A Protein (adrenodoxin re 91.8 0.16 5.6E-06 50.9 5.3 36 20-60 144-200 (460)
380 2uyy_A N-PAC protein; long-cha 91.7 0.21 7E-06 47.3 5.7 34 21-59 30-63 (316)
381 2q3e_A UDP-glucose 6-dehydroge 91.7 0.14 4.8E-06 51.5 4.7 34 21-59 5-40 (467)
382 1yqg_A Pyrroline-5-carboxylate 91.7 0.14 4.8E-06 46.9 4.3 33 22-59 1-34 (263)
383 1a5z_A L-lactate dehydrogenase 91.6 0.14 4.7E-06 48.7 4.3 32 22-58 1-34 (319)
384 1yj8_A Glycerol-3-phosphate de 91.6 0.11 3.7E-06 50.6 3.7 35 21-60 21-62 (375)
385 2eez_A Alanine dehydrogenase; 91.6 0.19 6.7E-06 48.7 5.5 34 21-59 166-199 (369)
386 3c7a_A Octopine dehydrogenase; 91.5 0.097 3.3E-06 51.5 3.3 30 22-56 3-33 (404)
387 4gwg_A 6-phosphogluconate dehy 91.5 0.17 5.9E-06 50.8 5.1 35 20-59 3-37 (484)
388 3ius_A Uncharacterized conserv 91.4 0.15 5.2E-06 47.2 4.4 35 20-59 4-38 (286)
389 2gf2_A Hibadh, 3-hydroxyisobut 91.4 0.18 6.2E-06 47.1 4.9 33 22-59 1-33 (296)
390 3phh_A Shikimate dehydrogenase 91.4 0.23 7.7E-06 45.7 5.3 34 21-59 118-151 (269)
391 3gvi_A Malate dehydrogenase; N 91.4 0.22 7.6E-06 47.2 5.4 34 21-59 7-41 (324)
392 2zyd_A 6-phosphogluconate dehy 91.3 0.16 5.4E-06 51.2 4.6 34 21-59 15-48 (480)
393 1hyh_A L-hicdh, L-2-hydroxyiso 91.3 0.16 5.5E-06 47.9 4.4 33 22-59 2-36 (309)
394 2izz_A Pyrroline-5-carboxylate 91.2 0.19 6.4E-06 47.8 4.8 34 21-59 22-59 (322)
395 3cky_A 2-hydroxymethyl glutara 91.2 0.2 6.8E-06 46.9 5.0 34 21-59 4-37 (301)
396 2g5c_A Prephenate dehydrogenas 91.2 0.22 7.5E-06 46.2 5.2 33 22-59 2-36 (281)
397 2vhw_A Alanine dehydrogenase; 91.1 0.23 7.9E-06 48.3 5.5 35 20-59 167-201 (377)
398 3d1l_A Putative NADP oxidoredu 91.1 0.15 5E-06 47.0 3.8 34 21-59 10-44 (266)
399 3lzw_A Ferredoxin--NADP reduct 91.0 0.17 5.9E-06 47.7 4.5 35 21-60 154-188 (332)
400 3ego_A Probable 2-dehydropanto 91.0 0.2 6.9E-06 47.2 4.8 33 21-59 2-34 (307)
401 4aj2_A L-lactate dehydrogenase 91.0 0.25 8.4E-06 47.0 5.4 36 18-58 16-53 (331)
402 1p77_A Shikimate 5-dehydrogena 91.0 0.18 6.2E-06 46.6 4.3 34 20-58 118-151 (272)
403 2i6t_A Ubiquitin-conjugating e 91.0 0.19 6.5E-06 47.2 4.5 34 21-59 14-49 (303)
404 2egg_A AROE, shikimate 5-dehyd 91.0 0.23 7.8E-06 46.6 5.1 34 20-58 140-174 (297)
405 1oju_A MDH, malate dehydrogena 90.9 0.18 6.2E-06 47.1 4.3 33 22-59 1-35 (294)
406 1wdk_A Fatty oxidation complex 90.8 0.19 6.7E-06 53.2 4.9 34 21-59 314-347 (715)
407 1y6j_A L-lactate dehydrogenase 90.8 0.26 8.8E-06 46.7 5.3 33 21-58 7-41 (318)
408 1x0v_A GPD-C, GPDH-C, glycerol 90.8 0.12 4.2E-06 49.7 3.2 34 22-60 9-49 (354)
409 3fbs_A Oxidoreductase; structu 90.7 0.18 6.2E-06 46.7 4.1 33 21-59 141-173 (297)
410 4ffl_A PYLC; amino acid, biosy 90.6 0.27 9.2E-06 47.5 5.4 34 21-59 1-34 (363)
411 2ahr_A Putative pyrroline carb 90.6 0.21 7.1E-06 45.7 4.4 34 21-59 3-36 (259)
412 3f8d_A Thioredoxin reductase ( 90.6 0.39 1.3E-05 45.0 6.4 53 257-309 193-250 (323)
413 1jw9_B Molybdopterin biosynthe 90.6 0.21 7.3E-06 45.4 4.4 33 21-58 31-64 (249)
414 2rcy_A Pyrroline carboxylate r 90.5 0.2 6.8E-06 45.9 4.2 34 22-60 5-42 (262)
415 3p7m_A Malate dehydrogenase; p 90.5 0.29 1E-05 46.3 5.4 34 21-59 5-39 (321)
416 2pgd_A 6-phosphogluconate dehy 90.5 0.23 7.9E-06 50.0 4.9 33 22-59 3-35 (482)
417 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.5 0.22 7.6E-06 50.1 4.8 33 22-59 2-34 (478)
418 1edz_A 5,10-methylenetetrahydr 90.4 0.26 9E-06 46.4 4.9 34 20-58 176-210 (320)
419 3pqe_A L-LDH, L-lactate dehydr 90.4 0.26 8.9E-06 46.8 4.9 33 21-58 5-39 (326)
420 3tri_A Pyrroline-5-carboxylate 90.4 0.29 9.9E-06 45.4 5.2 34 21-59 3-39 (280)
421 2rir_A Dipicolinate synthase, 90.4 0.3 1E-05 45.8 5.3 35 20-59 156-190 (300)
422 3zwc_A Peroxisomal bifunctiona 90.4 0.32 1.1E-05 51.5 6.1 34 21-59 316-349 (742)
423 1o94_A Tmadh, trimethylamine d 90.3 0.26 8.8E-06 52.6 5.3 34 21-59 528-563 (729)
424 1yb4_A Tartronic semialdehyde 90.2 0.19 6.5E-06 46.9 3.8 32 22-59 4-35 (295)
425 3d4o_A Dipicolinate synthase s 90.2 0.32 1.1E-05 45.4 5.4 35 20-59 154-188 (293)
426 1i36_A Conserved hypothetical 90.2 0.24 8.4E-06 45.3 4.5 30 23-57 2-31 (264)
427 3nep_X Malate dehydrogenase; h 90.1 0.25 8.4E-06 46.7 4.4 33 22-59 1-35 (314)
428 1pjq_A CYSG, siroheme synthase 90.1 0.26 9E-06 49.2 4.9 33 21-58 12-44 (457)
429 3gpi_A NAD-dependent epimerase 90.0 0.36 1.2E-05 44.6 5.6 34 21-59 3-36 (286)
430 1np3_A Ketol-acid reductoisome 90.0 0.31 1E-05 46.6 5.2 34 21-59 16-49 (338)
431 2qrj_A Saccharopine dehydrogen 90.0 0.21 7.3E-06 48.3 3.9 40 20-64 213-257 (394)
432 2hk9_A Shikimate dehydrogenase 89.9 0.25 8.5E-06 45.7 4.3 34 21-59 129-162 (275)
433 3ew7_A LMO0794 protein; Q8Y8U8 89.7 0.39 1.3E-05 42.3 5.3 33 22-59 1-34 (221)
434 3h8l_A NADH oxidase; membrane 89.5 0.38 1.3E-05 47.2 5.5 39 22-63 2-41 (409)
435 1zej_A HBD-9, 3-hydroxyacyl-CO 89.5 0.34 1.2E-05 45.2 4.8 34 20-59 11-44 (293)
436 3vku_A L-LDH, L-lactate dehydr 89.5 0.33 1.1E-05 46.0 4.8 35 19-58 7-43 (326)
437 4b4o_A Epimerase family protei 89.4 0.42 1.4E-05 44.5 5.5 33 22-59 1-34 (298)
438 1ldn_A L-lactate dehydrogenase 89.3 0.35 1.2E-05 45.7 4.9 34 20-58 5-40 (316)
439 3ond_A Adenosylhomocysteinase; 89.3 0.39 1.3E-05 47.9 5.3 35 20-59 264-298 (488)
440 3h2s_A Putative NADH-flavin re 89.2 0.42 1.4E-05 42.2 5.2 33 22-59 1-34 (224)
441 1lqt_A FPRA; NADP+ derivative, 89.2 0.36 1.2E-05 48.3 5.1 40 21-60 147-202 (456)
442 3e8x_A Putative NAD-dependent 89.2 0.43 1.5E-05 42.7 5.3 34 21-59 21-55 (236)
443 4a9w_A Monooxygenase; baeyer-v 89.2 0.3 1E-05 46.5 4.5 32 21-58 163-194 (357)
444 3k30_A Histamine dehydrogenase 89.2 0.39 1.3E-05 50.8 5.7 37 20-61 522-560 (690)
445 3fbt_A Chorismate mutase and s 89.1 0.43 1.5E-05 44.2 5.2 35 20-59 121-156 (282)
446 3ojo_A CAP5O; rossmann fold, c 89.0 0.35 1.2E-05 47.8 4.7 34 21-59 11-44 (431)
447 2aef_A Calcium-gated potassium 89.0 0.16 5.4E-06 45.7 2.1 34 20-59 8-41 (234)
448 3vps_A TUNA, NAD-dependent epi 89.0 0.43 1.5E-05 44.8 5.3 36 20-60 6-42 (321)
449 3r6d_A NAD-dependent epimerase 88.9 0.65 2.2E-05 41.0 6.2 33 22-59 6-40 (221)
450 3don_A Shikimate dehydrogenase 88.9 0.33 1.1E-05 44.9 4.2 35 20-59 116-151 (277)
451 2gag_A Heterotetrameric sarcos 88.8 0.22 7.4E-06 54.9 3.4 36 21-61 284-319 (965)
452 3b1f_A Putative prephenate deh 88.8 0.36 1.2E-05 44.9 4.6 33 21-58 6-40 (290)
453 2iz1_A 6-phosphogluconate dehy 88.7 0.36 1.2E-05 48.5 4.8 33 22-59 6-38 (474)
454 3obb_A Probable 3-hydroxyisobu 88.7 0.43 1.5E-05 44.8 5.0 34 21-59 3-36 (300)
455 3u62_A Shikimate dehydrogenase 88.7 0.45 1.5E-05 43.4 4.9 32 23-59 110-142 (253)
456 3pwz_A Shikimate dehydrogenase 88.6 0.51 1.7E-05 43.5 5.3 35 20-59 119-154 (272)
457 1w4x_A Phenylacetone monooxyge 88.5 0.35 1.2E-05 49.5 4.6 35 21-60 186-220 (542)
458 3tnl_A Shikimate dehydrogenase 88.5 0.51 1.7E-05 44.5 5.3 34 20-58 153-187 (315)
459 1y1p_A ARII, aldehyde reductas 88.3 0.65 2.2E-05 43.9 6.1 39 15-58 5-44 (342)
460 3jyo_A Quinate/shikimate dehyd 88.2 0.54 1.8E-05 43.6 5.3 35 20-59 126-161 (283)
461 1leh_A Leucine dehydrogenase; 88.2 0.52 1.8E-05 45.4 5.3 34 20-58 172-205 (364)
462 1nvt_A Shikimate 5'-dehydrogen 88.2 0.37 1.3E-05 44.9 4.2 32 21-58 128-159 (287)
463 3ce6_A Adenosylhomocysteinase; 88.2 0.5 1.7E-05 47.5 5.3 35 20-59 273-307 (494)
464 3o8q_A Shikimate 5-dehydrogena 88.2 0.53 1.8E-05 43.6 5.2 35 20-59 125-160 (281)
465 3vrd_B FCCB subunit, flavocyto 88.1 0.16 5.5E-06 49.7 1.7 37 21-60 2-38 (401)
466 3gvp_A Adenosylhomocysteinase 88.1 0.54 1.8E-05 46.0 5.3 35 20-59 219-253 (435)
467 2yjz_A Metalloreductase steap4 87.8 0.096 3.3E-06 46.1 0.0 35 20-59 18-52 (201)
468 2d5c_A AROE, shikimate 5-dehyd 88.0 0.48 1.6E-05 43.4 4.8 32 23-59 118-149 (263)
469 2dbq_A Glyoxylate reductase; D 87.9 0.6 2E-05 44.5 5.5 36 20-60 149-184 (334)
470 2r6j_A Eugenol synthase 1; phe 87.8 0.59 2E-05 43.9 5.4 39 16-59 6-45 (318)
471 1gte_A Dihydropyrimidine dehyd 87.8 0.46 1.6E-05 52.7 5.3 34 21-59 332-366 (1025)
472 1a4i_A Methylenetetrahydrofola 87.8 0.66 2.3E-05 43.0 5.4 34 20-58 164-198 (301)
473 3fi9_A Malate dehydrogenase; s 87.6 0.56 1.9E-05 44.8 5.1 33 21-58 8-43 (343)
474 3ngx_A Bifunctional protein fo 87.5 0.64 2.2E-05 42.5 5.2 34 20-58 149-183 (276)
475 3d0o_A L-LDH 1, L-lactate dehy 87.5 0.5 1.7E-05 44.7 4.6 33 21-58 6-40 (317)
476 4a26_A Putative C-1-tetrahydro 87.5 0.67 2.3E-05 43.0 5.3 34 20-58 164-198 (300)
477 1gpj_A Glutamyl-tRNA reductase 87.4 0.49 1.7E-05 46.4 4.7 35 20-59 166-201 (404)
478 3dhn_A NAD-dependent epimerase 87.3 0.52 1.8E-05 41.7 4.5 34 21-59 4-38 (227)
479 1hdo_A Biliverdin IX beta redu 87.2 0.7 2.4E-05 40.0 5.2 33 22-59 4-37 (206)
480 1smk_A Malate dehydrogenase, g 87.2 0.45 1.5E-05 45.2 4.2 35 20-59 7-44 (326)
481 1dlj_A UDP-glucose dehydrogena 87.2 0.43 1.5E-05 46.8 4.2 32 22-59 1-32 (402)
482 2zqz_A L-LDH, L-lactate dehydr 87.2 0.6 2E-05 44.3 5.0 35 19-58 7-43 (326)
483 1npy_A Hypothetical shikimate 87.1 0.64 2.2E-05 42.8 5.0 33 21-58 119-152 (271)
484 1mld_A Malate dehydrogenase; o 87.0 0.58 2E-05 44.2 4.8 33 22-59 1-36 (314)
485 3t4e_A Quinate/shikimate dehyd 87.0 0.72 2.5E-05 43.4 5.4 34 20-58 147-181 (312)
486 4id9_A Short-chain dehydrogena 87.0 0.6 2.1E-05 44.4 5.0 36 20-60 18-54 (347)
487 4g6h_A Rotenone-insensitive NA 87.0 0.63 2.2E-05 47.1 5.4 54 256-309 274-331 (502)
488 4hv4_A UDP-N-acetylmuramate--L 86.7 0.55 1.9E-05 47.4 4.7 34 21-59 22-56 (494)
489 3h9u_A Adenosylhomocysteinase; 86.5 0.75 2.6E-05 45.1 5.3 34 21-59 211-244 (436)
490 1b0a_A Protein (fold bifunctio 86.4 0.81 2.8E-05 42.1 5.2 34 20-58 158-192 (288)
491 1zud_1 Adenylyltransferase THI 86.3 0.76 2.6E-05 41.8 5.0 33 21-58 28-61 (251)
492 1lu9_A Methylene tetrahydromet 86.3 0.82 2.8E-05 42.4 5.4 34 20-58 118-152 (287)
493 3ba1_A HPPR, hydroxyphenylpyru 86.3 0.77 2.6E-05 43.7 5.2 36 20-60 163-198 (333)
494 2dvm_A Malic enzyme, 439AA lon 86.1 0.71 2.4E-05 45.5 4.9 32 20-56 185-219 (439)
495 2gcg_A Glyoxylate reductase/hy 86.0 0.63 2.1E-05 44.3 4.5 35 20-59 154-188 (330)
496 1ez4_A Lactate dehydrogenase; 85.8 0.66 2.3E-05 43.8 4.5 33 21-58 5-39 (318)
497 3rui_A Ubiquitin-like modifier 85.7 0.87 3E-05 43.2 5.2 33 21-58 34-67 (340)
498 3p2o_A Bifunctional protein fo 85.5 1 3.5E-05 41.4 5.4 34 20-58 159-193 (285)
499 4a5o_A Bifunctional protein fo 85.5 1 3.5E-05 41.4 5.4 34 20-58 160-194 (286)
500 2ydy_A Methionine adenosyltran 85.4 0.77 2.6E-05 43.0 4.8 34 21-59 2-36 (315)
No 1
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=7.6e-36 Score=309.35 Aligned_cols=383 Identities=18% Similarity=0.241 Sum_probs=221.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHHHcCCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTKLLNLKP 100 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~~lgl~~ 100 (487)
+++|||||||++||+||++|++ +|++|+||||++++|||++|+..+|+.||.|++++..+.. ..++++.++...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~-----~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~~~~-~~~l~~~~g~~~ 74 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQA-----AGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITDPSA-IEELFALAGKQL 74 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH-----TTCCEEEECCC-------CEEEETTEEEECSCCCBSCTHH-HHHHHHTTTCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHH-----CCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecCchh-HHHHHHHhcchh
Confidence 4789999999999999999999 9999999999999999999999999999999999876543 346777777543
Q ss_pred CCCC---CCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccC
Q 043512 101 KDPP---SSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFET 177 (487)
Q Consensus 101 ~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (487)
.... .....+++.+.+|..+.+..+ ...+.+.+.++.+. +...+.+|++.....+......+ .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~l~~~~p~---------~~~~~~~~~~~~~~~~~~~~~~~-~ 140 (501)
T 4dgk_A 75 KEYVELLPVTPFYRLCWESGKVFNYDND----QTRLEAQIQQFNPR---------DVEGYRQFLDYSRAVFKEGYLKL-G 140 (501)
T ss_dssp GGTCCEEEESSSEEEEETTSCEEEECSC----HHHHHHHHHHHCTH---------HHHHHHHHHHHHHHHTSSSCC---C
T ss_pred hhceeeEecCcceEEEcCCCCEEEeecc----HHHHHHHHhhcCcc---------ccchhhhHHHHHHHhhhhhhhhc-c
Confidence 2211 112234455567777766432 11122222222211 23344555544433332222111 1
Q ss_pred CCCCCCHHHHHHHcC-Chhh-hcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhhcCCCCceEeecc
Q 043512 178 RPVFESVDEMLKWAG-LFNL-TARSLEEELIDARLSPLLMQELVTIITRINYGQSLSISGLAGAVSLAGSGGGLWAVEGG 255 (487)
Q Consensus 178 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~gG 255 (487)
..++.+..+++.... +..+ ...++.+++.+...++.+. .++........+.+...++++.++.......|.|+|+||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG 219 (501)
T 4dgk_A 141 TVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLR-QAFSFHSLLVGGNPFATSSIYTLIHALEREWGVWFPRGG 219 (501)
T ss_dssp CCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHSCC--CCCTHHHHHHHHSCCCEEEETTH
T ss_pred ccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHH-hhhhhhhcccCCCcchhhhhhhhhhhhhccCCeEEeCCC
Confidence 223445555543221 1111 1245666666654444433 333322222233445667777777777777899999999
Q ss_pred hHHHHHHHHH---hcCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCCCCeeecCCCCC------CCcC
Q 043512 256 NWQMAAGLIN---RSDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDELNLHFSPPISI------PERK 325 (487)
Q Consensus 256 ~~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~~~~~l~p~~~~------~~~~ 325 (487)
+++++++|++ +.|++|++|++|++|..+++++ +|++.+|+++.||.||+|++++.+...+.++.+. ...+
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~ 299 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQT 299 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC------------------------
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhc
Confidence 9999999976 4699999999999999999987 6999999999999999999999876655554322 2233
Q ss_pred eEEEEEEEeeCCcCcccccCCCCCCCCceeEeccCCCCCeeEeeeccccCCCCcEEEeccCCCCCHHHHhhhcccCCceE
Q 043512 326 LQHTHATFVRGALNPAYFGLDGVSKIPELVATIEDPDLPFTCISVLKQHDENDFTYKIFSRKPMTDTLLDDIFSVRKETI 405 (487)
Q Consensus 326 ~~~~~~~~~~~~l~~~y~g~~~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~l~~~~l~~~f~~~~~~~ 405 (487)
.+.+.+.++ +|++++.. .+.+++|++.+..++ ++.+.++|.... .
T Consensus 300 ~~~~~s~~~------~~~~l~~~-----------~~~l~~~~i~~~~~~----------------~~~~~~~~~~~~--~ 344 (501)
T 4dgk_A 300 KRMSNSLFV------LYFGLNHH-----------HDQLAHHTVCFGPRY----------------RELIDEIFNHDG--L 344 (501)
T ss_dssp ---CCEEEE------EEEEESSC-----------CTTSCSEEEEEECC-------------------------------C
T ss_pred cccCCceeE------EEecccCC-----------ccccccceeccccch----------------hhhccccccccc--c
Confidence 445566777 89999876 356778998877665 455666665433 3
Q ss_pred EEeccCCCCCCCCC----CCCCceeeCCceeeec--chhhhHHHHhHHHHHHHHHHHHHHhhhhcC
Q 043512 406 RINWGAYPHYKAPE----VFAPFILDGRHLYYVN--AFENAASTMETSAVAAENVARLILSRFFSK 465 (487)
Q Consensus 406 ~~~w~~yp~~~~~~----~~~p~~l~g~~~~~~~--~~~~~~s~~~~~~~~g~~~a~~i~~~l~~~ 465 (487)
+.++..|. +.|+ +.+| +|++.+++. .+.......+|.. ..+.++++|++.++++
T Consensus 345 ~~~~~~~v--~~~s~~dp~~ap---~G~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~vl~~l~~~ 404 (501)
T 4dgk_A 345 AEDFSLYL--HAPCVTDSSLAP---EGCGSYYVLAPVPHLGTANLDWTV-EGPKLRDRIFAYLEQH 404 (501)
T ss_dssp CCEEEEEE--ECGGGTCGGGSS---TTCEEEEEEEEECCTTTSCCCHHH-HHHHHHHHHHHHHHHH
T ss_pred ccCCceec--ccCCCCCCCcCC---CCCceEEEEEecCccccccccHHH-HHHHHHHHHHHHHHHh
Confidence 33444443 3332 4567 677766652 2222223456765 5678899999888764
No 2
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.96 E-value=1e-27 Score=247.91 Aligned_cols=258 Identities=18% Similarity=0.188 Sum_probs=172.5
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHHHcCCCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTKLLNLKPK 101 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~~lgl~~~ 101 (487)
+||+|||||++||+||+.|++ .|++|+|+|+++++|||++|...+|+.+|.|+++++..+..+.++++++|+...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~-----~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~ 114 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV-----AGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNA 114 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH-----TTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCcce
Confidence 799999999999999999999 999999999999999999999999999999999999878888889999998432
Q ss_pred CCCC---CCCCceEEEEc--CCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHh----h
Q 043512 102 DPPS---SEDSTAFGIWD--GSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKY----Y 172 (487)
Q Consensus 102 ~~~~---~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 172 (487)
.... ......+.+.+ |....+. .. .... .+......+... .
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------~~--~~~~-----------------~~~~~~~~~~~~~~~~~ 164 (495)
T 2vvm_A 115 LSPSFNFSRGVNHFQLRTNPTTSTYMT-----------HE--AEDE-----------------LLRSALHKFTNVDGTNG 164 (495)
T ss_dssp EEESCCCSSSCCEEEEESSTTCCEEEC-----------HH--HHHH-----------------HHHHHHHHHHCSSSSTT
T ss_pred eecccccCCCceEEEecCCCCceeecC-----------HH--HHHH-----------------HHHHHHHHHHccchhhh
Confidence 2111 11111233333 2222221 10 0000 001111112110 0
Q ss_pred hhccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcC--CCHHHHHHHHHHHHHhhcCCCC-CcchHHHHHhhhc-----
Q 043512 173 ESFETRPVFESVDEMLKWAGLFNLTARSLEEELIDAR--LSPLLMQELVTIITRINYGQSL-SISGLAGAVSLAG----- 244 (487)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~----- 244 (487)
..+.. .++.... ......+...++.+|+.+.+ +++.. ..++..+....++.+. ++++...+..+..
T Consensus 165 ~~~~~-~~~~~~~----~~~~~~~~~~s~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 238 (495)
T 2vvm_A 165 RTVLP-FPHDMFY----VPEFRKYDEMSYSERIDQIRDELSLNE-RSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTY 238 (495)
T ss_dssp TTTCS-CTTSTTS----STTHHHHHTSBHHHHHHHHGGGCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSH
T ss_pred hhcCC-CCCCccc----CcchhhhhhhhHHHHHHHhhccCCHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCH
Confidence 00000 0011100 01112345678999998876 66654 4566777777777666 4555433222111
Q ss_pred ----CCCCceEeecchHHHHHHHHHhc---C-CeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC-Ceee
Q 043512 245 ----SGGGLWAVEGGNWQMAAGLINRS---D-VALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL-NLHF 315 (487)
Q Consensus 245 ----~~~g~~~~~gG~~~l~~~l~~~~---G-~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~-~~~l 315 (487)
...+.|+++||+++++++|++.+ | ++|+++++|++|..+++++.|++.+|+++.||+||+|+|+... .+.|
T Consensus 239 ~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~i~~ 318 (495)
T 2vvm_A 239 QGCMDCLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLSTIQF 318 (495)
T ss_dssp HHHHHHHHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGGSEE
T ss_pred HHHHhhhceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhheee
Confidence 01247889999999999998764 5 7899999999999888889999999988999999999999875 3556
Q ss_pred cCCCC
Q 043512 316 SPPIS 320 (487)
Q Consensus 316 ~p~~~ 320 (487)
.|++|
T Consensus 319 ~p~lp 323 (495)
T 2vvm_A 319 SPALS 323 (495)
T ss_dssp ESCCC
T ss_pred CCCCC
Confidence 77664
No 3
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.95 E-value=1.2e-26 Score=241.15 Aligned_cols=263 Identities=17% Similarity=0.227 Sum_probs=179.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeC-CeEecccceeEecCChhHHHHHHHcCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTIS-GQTFEAGASILHPKNYHTVNFTKLLNL 98 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~-g~~~d~G~~~~~~~~~~~~~~~~~lgl 98 (487)
+.+||+|||||++||+||+.|++ +|++|+|+|+++++|||+++.... |+.+|.|+++++..+..+.++++++|+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~-----~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 77 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHD-----SGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGL 77 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHH-----TTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCC
Confidence 35799999999999999999999 999999999999999999999985 899999999999877778889999998
Q ss_pred CCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccCC
Q 043512 99 KPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFETR 178 (487)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (487)
......... ..+.+.+|..+.+....+.. + .. ... ..+.+++. .+..+...+...
T Consensus 78 ~~~~~~~~~--~~~~~~~g~~~~~~~~~p~~-~---~~----~~~-----------~~~~~~~~----~~~~~~~~~~~~ 132 (520)
T 1s3e_A 78 ETYKVNEVE--RLIHHVKGKSYPFRGPFPPV-W---NP----ITY-----------LDHNNFWR----TMDDMGREIPSD 132 (520)
T ss_dssp CEEECCCSS--EEEEEETTEEEEECSSSCCC-C---SH----HHH-----------HHHHHHHH----HHHHHHTTSCTT
T ss_pred cceecccCC--ceEEEECCEEEEecCCCCCC-C---CH----HHH-----------HHHHHHHH----HHHHHHhhcCcC
Confidence 754322211 12444566555543211100 0 00 000 00111111 111111111111
Q ss_pred CCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHHHHhhhc-----------CC
Q 043512 179 PVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAGAVSLAG-----------SG 246 (487)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~-----------~~ 246 (487)
.++.. .........++.+|+.+...++.. +.++..+....++.+. ++++...+..+.. ..
T Consensus 133 ~~~~~-------~~~~~~~~~s~~~~l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~ 204 (520)
T 1s3e_A 133 APWKA-------PLAEEWDNMTMKELLDKLCWTESA-KQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNG 204 (520)
T ss_dssp CGGGS-------TTHHHHHTSBHHHHHHHHCSSHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTS
T ss_pred CCccc-------cchhhhhccCHHHHHHhhCCCHHH-HHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCC
Confidence 11110 011124568999999988876655 4566666666677665 5676543222111 11
Q ss_pred CCceEeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC-CeeecCCCC
Q 043512 247 GGLWAVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL-NLHFSPPIS 320 (487)
Q Consensus 247 ~g~~~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~-~~~l~p~~~ 320 (487)
...+++.||+++++++|++.+|++|++|++|++|..+++++.|++.+|+++.||+||+|+|+... .+.+.|++|
T Consensus 205 ~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp 279 (520)
T 1s3e_A 205 GQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP 279 (520)
T ss_dssp TTSEEETTCTHHHHHHHHHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGGSEEESCCC
T ss_pred cceEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcceeeCCCCC
Confidence 23578999999999999999999999999999999888888899999989999999999999975 355667664
No 4
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.94 E-value=3.3e-26 Score=231.61 Aligned_cols=372 Identities=13% Similarity=0.142 Sum_probs=210.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEec--CChhHHHHHHHcCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHP--KNYHTVNFTKLLNLK 99 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~--~~~~~~~~~~~lgl~ 99 (487)
+||+|||||++||+||++|++ +|++|+|+||++++||+++++..+|+.+|.|++++.. ....+.++++++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~-----~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 75 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLAR-----NGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAK 75 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCC
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCc
Confidence 589999999999999999999 9999999999999999999999999999999977654 344677899999886
Q ss_pred CCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccCCC
Q 043512 100 PKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFETRP 179 (487)
Q Consensus 100 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (487)
......... . ..+++|..+.+.. ....+... +...+..
T Consensus 76 ~~~~~~~~~-~-~~~~~g~~~~~~~-----------~~~~l~~~---------~~~~~~~-------------------- 113 (421)
T 3nrn_A 76 VEIVNSNPK-G-KILWEGKIFHYRE-----------SWKFLSVK---------EKAKALK-------------------- 113 (421)
T ss_dssp CCEEECSSS-C-EEEETTEEEEGGG-----------GGGGCC-----------------C--------------------
T ss_pred ceEEECCCC-e-EEEECCEEEEcCC-----------chhhCCHh---------HHHHHHH--------------------
Confidence 432211111 1 2333554433311 00000000 0000000
Q ss_pred CCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-Ccch--HHHHHhhhcCCCCceEeecch
Q 043512 180 VFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISG--LAGAVSLAGSGGGLWAVEGGN 256 (487)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~--~~~~~~~~~~~~g~~~~~gG~ 256 (487)
...... .........++.+|+.+.++.....+.++..+....++.+. ++++ +...+.......+.++++||+
T Consensus 114 ---~~~~~~--~~~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~ 188 (421)
T 3nrn_A 114 ---LLAEIR--MNKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGC 188 (421)
T ss_dssp ---CHHHHH--TTCCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCH
T ss_pred ---HHHHHH--hccCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCH
Confidence 000000 00011123677888887755555555666666666666554 5665 344333322345788999999
Q ss_pred HHHHHHHHHh---cCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCCCeeec-CCCCC----CCcCeEE
Q 043512 257 WQMAAGLINR---SDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDELNLHFS-PPISI----PERKLQH 328 (487)
Q Consensus 257 ~~l~~~l~~~---~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~~~~l~-p~~~~----~~~~~~~ 328 (487)
+.++++|++. .|++|+++++|++|..+++++ | +.+|+++.||.||+|+|++.....+. +..+. ...++++
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 266 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEP 266 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCC
Confidence 9999999874 499999999999999888888 6 45677999999999999986543221 11221 0122333
Q ss_pred EEEEEeeCCcCcccccCCCCCCCCceeEeccCCCCCeeEeeeccccC----C-CCcEEEec---cCC------CCCHHHH
Q 043512 329 THATFVRGALNPAYFGLDGVSKIPELVATIEDPDLPFTCISVLKQHD----E-NDFTYKIF---SRK------PMTDTLL 394 (487)
Q Consensus 329 ~~~~~~~~~l~~~y~g~~~~~~~~~~i~~~~~~~~~~~~i~~~~~~~----~-~~~~~~~~---s~~------~l~~~~l 394 (487)
+ +.++ .+++++........++....+. +..+.+....+ + +..+..+. ... +...++|
T Consensus 267 ~-~~~~------v~l~~~~~~~~~~~~~~~~~~~--~~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L 337 (421)
T 3nrn_A 267 S-EGIK------FNLAVPGEPRIGNTIVFTPGLM--INGFNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEEL 337 (421)
T ss_dssp C-CEEE------EEEEEESSCSSCSSEEECTTSS--SCEEECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred C-ceEE------EEEEEcCCcccCCeEEEcCCcc--eeeEeccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHH
Confidence 3 3333 4566655421111232211122 33333322221 1 22222111 111 1225788
Q ss_pred hhhcccCCceEEEecc-CCCCCCCCC-CCCCceeeCCceeeecchhhhH--HHHhHHHHHHHHHHHHH
Q 043512 395 DDIFSVRKETIRINWG-AYPHYKAPE-VFAPFILDGRHLYYVNAFENAA--STMETSAVAAENVARLI 458 (487)
Q Consensus 395 ~~~f~~~~~~~~~~w~-~yp~~~~~~-~~~p~~l~g~~~~~~~~~~~~~--s~~~~~~~~g~~~a~~i 458 (487)
.++|+.........|. ++|.++.+. .-.+ ... +++|++...-... -.||++..||+++|+.|
T Consensus 338 ~~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 338 LEIFPEGEPLLAQVYRDGNPVNRTRAGLHIE-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp HHHCTTCEEEEEEEC-------------CCC-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCeEEEeeeccCCCCcccccCCCCCC-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 8888732222334453 445333221 1112 223 5677663111112 26799999999999988
No 5
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.94 E-value=3.5e-25 Score=226.24 Aligned_cols=261 Identities=18% Similarity=0.198 Sum_probs=172.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHHHcCCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTKLLNLKP 100 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~~lgl~~ 100 (487)
.+||+|||||++||+||+.|++ .|++|+|+|+++++||++++...+|+.+|.|++++......+.++++++|+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~-----~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 79 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRK-----AGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKT 79 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCcc
Confidence 4799999999999999999999 99999999999999999999998999999999998877777778999999865
Q ss_pred CCCCCCCCCceEEEEc-CCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccCCC
Q 043512 101 KDPPSSEDSTAFGIWD-GSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFETRP 179 (487)
Q Consensus 101 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (487)
........ .+.+.+ |..+.+....+ .+.. ....+ +..+.. .+..+...+....
T Consensus 80 ~~~~~~~~--~~~~~~~g~~~~~~~~~~----~~~~--~~~~~--------------~~~~~~----~~~~~~~~~~~~~ 133 (453)
T 2yg5_A 80 FERYREGE--SVYISSAGERTRYTGDSF----PTNE--TTKKE--------------MDRLID----EMDDLAAQIGAEE 133 (453)
T ss_dssp EECCCCSE--EEEECTTSCEEEECSSSC----SCCH--HHHHH--------------HHHHHH----HHHHHHHHHCSSC
T ss_pred cccccCCC--EEEEeCCCceeeccCCCC----CCCh--hhHHH--------------HHHHHH----HHHHHHhhcCCCC
Confidence 33322111 122333 44444421100 0000 00000 011111 1111111110011
Q ss_pred CCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC--CcchHHHHHhhhcC----------CC
Q 043512 180 VFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL--SISGLAGAVSLAGS----------GG 247 (487)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~----------~~ 247 (487)
.+.. .........++.+|+.+...++.+. .++..+....|+.+. ++++...+...... ..
T Consensus 134 ~~~~-------~~~~~~~~~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~ 205 (453)
T 2yg5_A 134 PWAH-------PLARDLDTVSFKQWLINQSDDAEAR-DNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFI 205 (453)
T ss_dssp GGGS-------TTHHHHHSSBHHHHHHHHCSCHHHH-HHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHH
T ss_pred CCCC-------cchhhhhhccHHHHHHhhcCCHHHH-HHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCc
Confidence 1111 0112245688999999887766554 455666655566543 56665433222111 01
Q ss_pred CceEeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCE-EEEEEccCceEecCEEEEccCCCCCC-eeecCCCCC
Q 043512 248 GLWAVEGGNWQMAAGLINRSDVALHLHEEIESISYLREY-YELNSTKGNSYTCQITVVATPLDELN-LHFSPPISI 321 (487)
Q Consensus 248 g~~~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~a~~~~~~~-~~l~p~~~~ 321 (487)
..++++||+++++++|++.+|++|++|++|++|..++++ +.|++ +|+++.||+||+|+|+.... +.+.|++|.
T Consensus 206 ~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~ 280 (453)
T 2yg5_A 206 LDKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPR 280 (453)
T ss_dssp TCEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCH
T ss_pred ceEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCH
Confidence 257899999999999999999999999999999999888 88877 67789999999999998653 456666653
No 6
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.93 E-value=5.3e-25 Score=227.98 Aligned_cols=251 Identities=15% Similarity=0.231 Sum_probs=163.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHHHcCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTKLLNL 98 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~~lgl 98 (487)
.+.+||+|||||++||+||+.|++ +|++|+|+|+++++||++++...+|+.+|.|+++++..+..+.++++++|+
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~-----~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl 85 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKI-----HGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGL 85 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHT-----TSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH-----CCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCC
Confidence 346899999999999999999999 999999999999999999999999999999999998877778899999998
Q ss_pred CCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcC-ChHHHhHHHHHHHHHHHHhhhhccC
Q 043512 99 KPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGL-SLLRMESFTESAVDKFLKYYESFET 177 (487)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (487)
............++.+.+|..+.+.. +...+ . +... +. . .++......+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~g~~~~~p~----~~~~~-------~-------~~~~~~~---~-------~~~~~~~~~~~~ 137 (504)
T 1sez_A 86 REKQQFPLSQNKRYIARNGTPVLLPS----NPIDL-------I-------KSNFLST---G-------SKLQMLLEPILW 137 (504)
T ss_dssp GGGEECCSSCCCEEEESSSSEEECCS----SHHHH-------H-------HSSSSCH---H-------HHHHHHTHHHHC
T ss_pred cccceeccCCCceEEEECCeEEECCC----CHHHH-------h-------ccccCCH---H-------HHHHHhHhhhcc
Confidence 65332221112234455665444321 11000 0 0000 00 0 000000000000
Q ss_pred CCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHH--HHhh------------
Q 043512 178 RPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAG--AVSL------------ 242 (487)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~--~~~~------------ 242 (487)
.. ..... ......++.+|+.+. +...+.+.++.++....|+.+. ++++... .++.
T Consensus 138 ~~--~~~~~-------~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~ 207 (504)
T 1sez_A 138 KN--KKLSQ-------VSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGA 207 (504)
T ss_dssp -------------------CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHH
T ss_pred Cc--ccccc-------cCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHH
Confidence 00 00000 011346788888765 4456666666666666666554 4543211 0100
Q ss_pred ----hc-----------------CCCCceEeecchHHHHHHHHHhcC-CeEEeCCceEEEEEeCCE------EEEEEc--
Q 043512 243 ----AG-----------------SGGGLWAVEGGNWQMAAGLINRSD-VALHLHEEIESISYLREY------YELNST-- 292 (487)
Q Consensus 243 ----~~-----------------~~~g~~~~~gG~~~l~~~l~~~~G-~~i~~~~~V~~I~~~~~~------v~V~~~-- 292 (487)
.. ...+.++++||+++|+++|++.++ ++|++|++|++|..++++ +.|++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~ 287 (504)
T 1sez_A 208 IRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASP 287 (504)
T ss_dssp HHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCS
T ss_pred HHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCC
Confidence 00 112578999999999999999987 899999999999988776 766654
Q ss_pred cC---ceEecCEEEEccCCCCCC
Q 043512 293 KG---NSYTCQITVVATPLDELN 312 (487)
Q Consensus 293 ~G---~~~~ad~VV~a~~~~~~~ 312 (487)
+| +++.||+||+|+|+..+.
T Consensus 288 ~g~~~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 288 HKRQSEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp SSSCBCCCEESEEEECSCHHHHH
T ss_pred CCccceeEECCEEEECCCHHHHH
Confidence 45 578999999999998653
No 7
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.93 E-value=1e-24 Score=223.63 Aligned_cols=252 Identities=15% Similarity=0.206 Sum_probs=165.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCC------CeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHH
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWH------PRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTK 94 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G------~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~ 94 (487)
++||+|||||++||+||++|++ +| ++|+|||+++++||++++...+|+.+|.|++++...+..+.++++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~-----~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~ 79 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEK-----EIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVK 79 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----HHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----hccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHH
Confidence 5799999999999999999999 88 999999999999999999999999999999999888888889999
Q ss_pred HcCCCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhh
Q 043512 95 LLNLKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYES 174 (487)
Q Consensus 95 ~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (487)
++|+........ ....+.+.+|....+.. +....++..+..+. +.. +... ..++....
T Consensus 80 ~lgl~~~~~~~~-~~~~~~~~~g~~~~~~~---~~~~~~p~~~~~~~-------~~~-----~~~~----~~~~~~~~-- 137 (470)
T 3i6d_A 80 DLGLEHLLVNNA-TGQSYVLVNRTLHPMPK---GAVMGIPTKIAPFV-------STG-----LFSL----SGKARAAM-- 137 (470)
T ss_dssp HTTCCTTEEECC-CCCEEEECSSCEEECCC----------------------------------------CCSHHHHH--
T ss_pred HcCCcceeecCC-CCccEEEECCEEEECCC---CcccCCcCchHHhh-------ccC-----cCCH----HHHHHHhc--
Confidence 999876443110 11123344454333311 00000000000000 000 0000 00000000
Q ss_pred ccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHHHHhhhc---------
Q 043512 175 FETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAGAVSLAG--------- 244 (487)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--------- 244 (487)
+.+. .........++.+|+.+. +...+.+.++..+....|+.+. +++....+-.+..
T Consensus 138 -----------~~~~-~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 204 (470)
T 3i6d_A 138 -----------DFIL-PASKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLI 204 (470)
T ss_dssp -----------HHHS-CCCSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC---------
T ss_pred -----------Cccc-CCCCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHH
Confidence 0000 011123456788888774 4466666677777777787665 4554322111100
Q ss_pred ------------------CCCCceEeecchHHHHHHHHHhcC-CeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEc
Q 043512 245 ------------------SGGGLWAVEGGNWQMAAGLINRSD-VALHLHEEIESISYLREYYELNSTKGNSYTCQITVVA 305 (487)
Q Consensus 245 ------------------~~~g~~~~~gG~~~l~~~l~~~~G-~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a 305 (487)
.....+++++|++.++++|++.++ ++|+++++|++|..+++++.|++.+|+++.||+||+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a 284 (470)
T 3i6d_A 205 LGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVT 284 (470)
T ss_dssp ----------------------EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEEC
T ss_pred HHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEEC
Confidence 012356899999999999999876 7999999999999988889999999988999999999
Q ss_pred cCCCCCC
Q 043512 306 TPLDELN 312 (487)
Q Consensus 306 ~~~~~~~ 312 (487)
+|++...
T Consensus 285 ~p~~~~~ 291 (470)
T 3i6d_A 285 APHKAAA 291 (470)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 9998753
No 8
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.93 E-value=4.3e-26 Score=236.67 Aligned_cols=249 Identities=13% Similarity=0.126 Sum_probs=147.6
Q ss_pred CCCCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEE-eeCCeEecccceeEecCChhHHHHH
Q 043512 15 QPTFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATV-TISGQTFEAGASILHPKNYHTVNFT 93 (487)
Q Consensus 15 ~~~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~-~~~g~~~d~G~~~~~~~~~~~~~~~ 93 (487)
|+..++.+||||||||++||+||++|++. .|++|+|||+++++||+++|. ..+|+.+|.|+++++..++.+.+++
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~----~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~ 79 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQI----DGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCL 79 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHH----CCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHH
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhh----CCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHH
Confidence 55556678999999999999999999872 499999999999999999986 4679999999999998888888898
Q ss_pred HHcCCCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhh
Q 043512 94 KLLNLKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYE 173 (487)
Q Consensus 94 ~~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (487)
++++........... ....+.+|+.+.+. +...+..+... ..................
T Consensus 80 ~e~~~~~~~~~~~~~-~~~i~~~g~~~~~p---------~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 137 (513)
T 4gde_A 80 DEALPKEDDWYTHQR-ISYVRCQGQWVPYP---------FQNNISMLPKE------------EQVKCIDGMIDAALEARV 137 (513)
T ss_dssp HHHSCSGGGEEEEEC-CEEEEETTEEEESS---------GGGGGGGSCHH------------HHHHHHHHHHHHHHHHHT
T ss_pred HHhCCccceeEEecC-ceEEEECCeEeecc---------hhhhhhhcchh------------hHHHHHHHHHHHHHhhhc
Confidence 888754332211111 11334455443331 00000000000 000001111111000000
Q ss_pred hccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchH-----------HH---
Q 043512 174 SFETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGL-----------AG--- 238 (487)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~-----------~~--- 238 (487)
..... .++.+|+.+. +.+.+.+.++..++...++.+. .+++- ..
T Consensus 138 ---~~~~~-----------------~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~ 196 (513)
T 4gde_A 138 ---ANTKP-----------------KTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTT 196 (513)
T ss_dssp ---CCSCC-----------------CSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHH
T ss_pred ---ccccc-----------------cCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhh
Confidence 11112 2333333221 1123333344455555555443 22221 00
Q ss_pred -HHhh-hcC----C-CCceEeecchHHHHHHHHHhc---CCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCC
Q 043512 239 -AVSL-AGS----G-GGLWAVEGGNWQMAAGLINRS---DVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPL 308 (487)
Q Consensus 239 -~~~~-~~~----~-~g~~~~~gG~~~l~~~l~~~~---G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~ 308 (487)
.+.. ... . ...+.++||+++++++|++.+ |++|+++++|++|..++++ |++.+|+++.||+||+|+|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 197 NVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCH
T ss_pred hhhhcccccccccccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCH
Confidence 0100 000 1 113456899999999998864 8999999999999987765 45689999999999999998
Q ss_pred CCCC
Q 043512 309 DELN 312 (487)
Q Consensus 309 ~~~~ 312 (487)
..+.
T Consensus 275 ~~l~ 278 (513)
T 4gde_A 275 DFLA 278 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8653
No 9
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.93 E-value=3.5e-24 Score=217.35 Aligned_cols=254 Identities=17% Similarity=0.214 Sum_probs=163.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeC---CeEecccceeEecC-ChhHHHHHHHcC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTIS---GQTFEAGASILHPK-NYHTVNFTKLLN 97 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~---g~~~d~G~~~~~~~-~~~~~~~~~~lg 97 (487)
+||||||||++|++||+.|++ .|++|+|+|+++++||++.+...+ |..+|.|+++++.. ...+.++++++|
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~-----~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g 76 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN-----AGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYG 76 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH-----TTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHH-----cCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhC
Confidence 699999999999999999999 999999999999999999998887 99999999999887 777778888898
Q ss_pred CCCCCCCCCCCCceEEE-EcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhcc
Q 043512 98 LKPKDPPSSEDSTAFGI-WDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFE 176 (487)
Q Consensus 98 l~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (487)
+.......... ..+ ..+..+.. . ....... . ..+.....++......+.
T Consensus 77 ~~~~~~~~~~~---~~~~~~~~~~~~-----~--~~~~~~~---~-----------------~~~~~~~~~l~~~~~~~~ 126 (431)
T 3k7m_X 77 IPTAAASEFTS---FRHRLGPTAVDQ-----A--FPIPGSE---A-----------------VAVEAATYTLLRDAHRID 126 (431)
T ss_dssp CCEEECCCCCE---ECCBSCTTCCSS-----S--SCCCGGG---H-----------------HHHHHHHHHHHHHHTTCC
T ss_pred CeeeecCCCCc---EEEEecCCeecC-----C--CCCCHHH---H-----------------HHHHHHHHHHHHHHHhcC
Confidence 86433221110 111 11111110 0 0000000 0 000111111111111111
Q ss_pred CCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHHHHhhhcC--------CC
Q 043512 177 TRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAGAVSLAGS--------GG 247 (487)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~--------~~ 247 (487)
...++.. ....... .++.+++...+..+... .+........++.++ +++....+..+... ..
T Consensus 127 ~~~~~~~-------~~~~~~d-~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 197 (431)
T 3k7m_X 127 LEKGLEN-------QDLEDLD-IPLNEYVDKLDLPPVSR-QFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLS 197 (431)
T ss_dssp TTTCTTS-------SSCGGGC-SBHHHHHHHHTCCHHHH-HHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHT
T ss_pred CCCCccC-------cchhhhc-CCHHHHHHhcCCCHHHH-HHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecc
Confidence 1000100 1122333 77888888877766543 344445555566665 35543322111110 11
Q ss_pred CceEeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC-CeeecCCCC
Q 043512 248 GLWAVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL-NLHFSPPIS 320 (487)
Q Consensus 248 g~~~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~-~~~l~p~~~ 320 (487)
....+.+|+.+++++++++.| +|+++++|++|..+++++.|++.+|++++||+||+|+|+... .+.+.|+++
T Consensus 198 ~~~~~~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~ 270 (431)
T 3k7m_X 198 LDEVFSNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP 270 (431)
T ss_dssp CCEEETTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCC
T ss_pred hhhhcCCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCC
Confidence 122679999999999999888 999999999999888889999999988999999999999865 355777764
No 10
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.92 E-value=2.6e-24 Score=217.91 Aligned_cols=236 Identities=15% Similarity=0.105 Sum_probs=154.0
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEec--CChhHHHHHHHcCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHP--KNYHTVNFTKLLNLK 99 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~--~~~~~~~~~~~lgl~ 99 (487)
+||+|||||++||+||++|++ +|++|+||||++++||+++++..+|+.+|.|++++.. ....+.++++++|+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~-----~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 75 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSK-----AGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEAS 75 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHH-----TTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCC
Confidence 589999999999999999999 9999999999999999999999999999999876543 234567899999976
Q ss_pred CCCCCCCCCCceEEEE-c---------CCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHH
Q 043512 100 PKDPPSSEDSTAFGIW-D---------GSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFL 169 (487)
Q Consensus 100 ~~~~~~~~~~~~~~~~-~---------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (487)
......... ...+. + +..+.+ .. ..... +.....++. ..+.
T Consensus 76 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~-----------~~~~~~~~~----~~~~ 126 (425)
T 3ka7_A 76 VNIVRSEMT--TVRVPLKKGNPDYVKGFKDISF-----------ND-FPSLL-----------SYKDRMKIA----LLIV 126 (425)
T ss_dssp CCEEECCCC--EEEEESSTTCCSSTTCEEEEEG-----------GG-GGGGS-----------CHHHHHHHH----HHHH
T ss_pred ceEEecCCc--eEEeecCCCcccccccccceeh-----------hh-hhhhC-----------CHHHHHHHH----HHHH
Confidence 432221111 11111 0 111111 00 00000 000000000 0000
Q ss_pred HhhhhccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-Ccch--HHHHHhhhcCC
Q 043512 170 KYYESFETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISG--LAGAVSLAGSG 246 (487)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~--~~~~~~~~~~~ 246 (487)
.... ......++.+|+.+..- ....+.++..+....++.+. .+++ +...+......
T Consensus 127 ~~~~--------------------~~~~~~s~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 185 (425)
T 3ka7_A 127 STRK--------------------NRPSGSSLQAWIKSQVS-DEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRF 185 (425)
T ss_dssp HTTT--------------------SCCCSSBHHHHHHHHCC-CHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH
T ss_pred hhhh--------------------cCCCCCCHHHHHHHhcC-CHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhc
Confidence 0000 01124567777776533 44444555566655566554 4665 33333332234
Q ss_pred CCceEeecchHHHHHHHHHh---cCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCCCCe
Q 043512 247 GGLWAVEGGNWQMAAGLINR---SDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDELNL 313 (487)
Q Consensus 247 ~g~~~~~gG~~~l~~~l~~~---~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~~~~ 313 (487)
.+.+++.||++.++++|++. .|++|+++++|++|..+++++ +|++. |+++.||.||+|+|++.+..
T Consensus 186 ~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 186 GGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp CSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHH
T ss_pred CCccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHH
Confidence 57889999999999999774 599999999999999998887 47775 77899999999999987643
No 11
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.91 E-value=3.2e-24 Score=222.59 Aligned_cols=246 Identities=20% Similarity=0.216 Sum_probs=145.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCC-CeEEEEecCCCccceeEEEee-CCeEecccceeEecC-ChhHHHHHHHcC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWH-PRILMFERNGVVGGRMATVTI-SGQTFEAGASILHPK-NYHTVNFTKLLN 97 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G-~~V~VlE~~~~~GGr~~s~~~-~g~~~d~G~~~~~~~-~~~~~~~~~~lg 97 (487)
.+||||||||++||+||+.|++ +| ++|+|||+++++|||++|... +|+.+|+|++|++.. ...+..+...++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~-----~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg 82 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQ-----NGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLS 82 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHH-----TTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHh-----cCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhC
Confidence 4799999999999999999999 99 999999999999999999887 799999999999865 334445666666
Q ss_pred CCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccC
Q 043512 98 LKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFET 177 (487)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (487)
+..... .+.+.++..+.+..+. .. +... ....+..+.+.....+....... .
T Consensus 83 ~~~~~~-------~~~~~~~~~~~~~~~~--~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~-~ 134 (516)
T 1rsg_A 83 LNDGRT-------RFVFDDDNFIYIDEER--GR--VDHD----------------KELLLEIVDNEMSKFAELEFHQH-L 134 (516)
T ss_dssp HHHCCC-------CEECCCCCCEEEETTT--EE--CTTC----------------TTTCHHHHHHHHHHHHHHHC-----
T ss_pred CCCcce-------eEEECCCCEEEEcCCC--cc--cccc----------------HHHHHHHHHHHHHHHHHHHhhhc-c
Confidence 522111 0222233333332110 00 0000 00001111111111111110000 0
Q ss_pred CCCCCCHHHHHHHcCChhhhcccHHHHHHH------cCCCHHHHHHHHHHH---HHhhcCCCC-CcchHHHHHhhhcCCC
Q 043512 178 RPVFESVDEMLKWAGLFNLTARSLEEELID------ARLSPLLMQELVTII---TRINYGQSL-SISGLAGAVSLAGSGG 247 (487)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~---~~~~~g~~~-~~~~~~~~~~~~~~~~ 247 (487)
...+.++.+++.+ ..+.+... .+...+ ....+|.+. .+++.+.+. ....
T Consensus 135 -----------------~~~d~s~~~~l~~~l~~~~~~l~~~~~-~~~~~~~~~~~~~~g~~~~~~s~~~~~~---~~~~ 193 (516)
T 1rsg_A 135 -----------------GVSDCSFFQLVMKYLLQRRQFLTNDQI-RYLPQLCRYLELWHGLDWKLLSAKDTYF---GHQG 193 (516)
T ss_dssp --------------------CCBHHHHHHHHHHHHGGGSCHHHH-HHHHHHHGGGHHHHTBCTTTSBHHHHCC---CCSS
T ss_pred -----------------CCCCCCHHHHHHHHHHHhhcccCHHHH-HHHHHHHHHHHHHhCCChHHCChHHHHh---hccC
Confidence 0011222222211 11111111 111111 122234444 355443221 1222
Q ss_pred CceEeecchHHHHHHHHHhcC-CeEEeCCceEEEEEe-CCEEEEEEccCceEecCEEEEccCCCCC------------Ce
Q 043512 248 GLWAVEGGNWQMAAGLINRSD-VALHLHEEIESISYL-REYYELNSTKGNSYTCQITVVATPLDEL------------NL 313 (487)
Q Consensus 248 g~~~~~gG~~~l~~~l~~~~G-~~i~~~~~V~~I~~~-~~~v~V~~~~G~~~~ad~VV~a~~~~~~------------~~ 313 (487)
..+++.| +++++++|++.++ ++|++|++|++|..+ ++++.|++.+|+++.||+||+|+|+..+ .+
T Consensus 194 ~~~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i 272 (516)
T 1rsg_A 194 RNAFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRI 272 (516)
T ss_dssp CCEEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCC
T ss_pred cchhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccce
Confidence 3456777 9999999998874 689999999999986 5678999999988999999999999865 37
Q ss_pred eecCCCCC
Q 043512 314 HFSPPISI 321 (487)
Q Consensus 314 ~l~p~~~~ 321 (487)
.|.|++|.
T Consensus 273 ~f~P~Lp~ 280 (516)
T 1rsg_A 273 EFQPPLKP 280 (516)
T ss_dssp EEESCCCH
T ss_pred EecCCCCH
Confidence 88888754
No 12
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.91 E-value=1.1e-23 Score=216.51 Aligned_cols=253 Identities=19% Similarity=0.208 Sum_probs=167.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCC--CeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHHHcCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWH--PRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTKLLNL 98 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G--~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~~lgl 98 (487)
++||+|||||++||+||++|++ +| ++|+|+|+++++||++++...+|+.+|.|++++...+..+.++++++|+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~-----~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~ 78 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAER-----AFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGL 78 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHH-----HCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTC
T ss_pred cccEEEECCCHHHHHHHHHHHH-----hCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCC
Confidence 5799999999999999999999 88 9999999999999999999999999999999998888888899999998
Q ss_pred CCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcC-ChHHHhHHHHHHHHHHHHhhhhccC
Q 043512 99 KPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGL-SLLRMESFTESAVDKFLKYYESFET 177 (487)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (487)
........ ....+.+.+|....+.. +....++..+..+ .+... +.. .++ ....+. . .
T Consensus 79 ~~~~~~~~-~~~~~~~~~g~~~~~p~---~~~~~~p~~~~~~-------~~~~~~~~~--~~~---~~~~~~---~---~ 136 (475)
T 3lov_A 79 GEKLVRNN-TSQAFILDTGGLHPIPK---GAVMGIPTDLDLF-------RQTTLLTEE--EKQ---EVADLL---L---H 136 (475)
T ss_dssp GGGEEECC-CCCEEEEETTEEEECCS---SEETTEESCHHHH-------TTCSSSCHH--HHH---HHHHHH---H---S
T ss_pred cceEeecC-CCceEEEECCEEEECCC---cccccCcCchHHH-------hhccCCChh--HHH---HhhCcc---c---C
Confidence 75432211 11124445554443321 1000011100000 00000 000 000 000000 0 0
Q ss_pred CCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHH---HHHh----------h-
Q 043512 178 RPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLA---GAVS----------L- 242 (487)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~---~~~~----------~- 242 (487)
.. . .........++.+|+.+. +...+.+.++..+....|+.+. ++++.. .+.. .
T Consensus 137 ~~---~-------~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~ 205 (475)
T 3lov_A 137 PS---D-------SLRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGM 205 (475)
T ss_dssp CC---T-------TCCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHH
T ss_pred Cc---c-------cccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHH
Confidence 00 0 000123456788888763 4466667777778877887665 354321 1110 0
Q ss_pred --hc--------------CCCCceEeecchHHHHHHHHHhcC-CeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEc
Q 043512 243 --AG--------------SGGGLWAVEGGNWQMAAGLINRSD-VALHLHEEIESISYLREYYELNSTKGNSYTCQITVVA 305 (487)
Q Consensus 243 --~~--------------~~~g~~~~~gG~~~l~~~l~~~~G-~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a 305 (487)
.. .....++++||++.++++|++.++ ++|+++++|++|..+++++.|++.+| ++.||+||+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a 284 (475)
T 3lov_A 206 RLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLT 284 (475)
T ss_dssp HHTCC--------------CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEEC
T ss_pred HHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEEC
Confidence 00 022356899999999999999886 89999999999999999999999999 8999999999
Q ss_pred cCCCCCC
Q 043512 306 TPLDELN 312 (487)
Q Consensus 306 ~~~~~~~ 312 (487)
+|++...
T Consensus 285 ~p~~~~~ 291 (475)
T 3lov_A 285 IPHPQVV 291 (475)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 9998753
No 13
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.91 E-value=9.3e-24 Score=213.79 Aligned_cols=248 Identities=17% Similarity=0.227 Sum_probs=165.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCC-CeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHHHcC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWH-PRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTKLLN 97 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G-~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~~lg 97 (487)
++.+||+|||||++||+||++|++ .| ++|+|+|+++++||+++|...+|+.+|.|++++...+..+.++++++|
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~-----~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g 78 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQ-----AGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTG 78 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHH-----TTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHh-----CCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhC
Confidence 356899999999999999999999 99 999999999999999999999999999999998877778889999999
Q ss_pred CCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccC
Q 043512 98 LKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFET 177 (487)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (487)
+....... ...+.+.+|..... ..+..... .+. .. +.++ ...+...+..+..
T Consensus 79 ~~~~~~~~---~~~~~~~~g~~~~~----~~~~~~~~----~~~---~~----------~~~l----~~~~~~~~~~~~~ 130 (424)
T 2b9w_A 79 DKVDGPKL---RREFLHEDGEIYVP----EKDPVRGP----QVM---AA----------VQKL----GQLLATKYQGYDA 130 (424)
T ss_dssp CCCCSCCC---CEEEECTTSCEECG----GGCTTHHH----HHH---HH----------HHHH----HHHHHTTTTTTTS
T ss_pred Cccccccc---cceeEcCCCCEecc----ccCcccch----hHH---HH----------HHHH----HHHHhhhhhhccc
Confidence 86543211 11122234432210 00000000 000 00 0000 0001111111100
Q ss_pred CCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhhc-------CCCCce
Q 043512 178 RPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSLSISGLAGAVSLAG-------SGGGLW 250 (487)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~g~~ 250 (487)
...+.. .......++.+|+.+.+.+. +.+.+..++....|+.+.++++++.+ .+.. ...+.+
T Consensus 131 ~~~~~~---------~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~~ 199 (424)
T 2b9w_A 131 NGHYNK---------VHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYGHFDNVPAAYVL-KYLDFVTMMSFAKGDLW 199 (424)
T ss_dssp SSSSSC---------CCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCCCTTTSBHHHHH-HHSCHHHHHHHHHTCCB
T ss_pred ccchhh---------hhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccCChHhcCHHHHH-HhhhHhhhhcccCCceE
Confidence 000110 11234578999999887753 54444444455556655567775532 1111 124577
Q ss_pred EeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 251 AVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 251 ~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
.+.+|+++++++|.+.++.+|+++++|++|..+++++.|++.+| ++.||+||+|+|++..
T Consensus 200 ~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 200 TWADGTQAMFEHLNATLEHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLEKF 259 (424)
T ss_dssp CCTTCHHHHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHHHH
T ss_pred EeCChHHHHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHHHH
Confidence 89999999999999999889999999999998888888999888 5999999999999864
No 14
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.91 E-value=1.9e-23 Score=214.89 Aligned_cols=253 Identities=18% Similarity=0.206 Sum_probs=168.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHHHcCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTKLLNL 98 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~~lgl 98 (487)
...+||+|||||++||+||+.|++ +|++|+|+|+++++|||++|...+|+.+|.|++++...+..+.++++++|+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~-----~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl 88 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRS-----RGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNL 88 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHT-----TTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHH-----CCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCC
Confidence 346899999999999999999999 999999999999999999999999999999999999877778899999998
Q ss_pred CCCCCCCC-CCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccC
Q 043512 99 KPKDPPSS-EDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFET 177 (487)
Q Consensus 99 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (487)
........ .....+.+.+|+.+.+.. ... .+. +... ..+. .++..+...+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~p~----~~~-------~~~-------~~~~-----~~~~----~~~~~~~~~~~~ 141 (478)
T 2ivd_A 89 EGRIRAADPAAKRRYVYTRGRLRSVPA----SPP-------AFL-------ASDI-----LPLG----ARLRVAGELFSR 141 (478)
T ss_dssp GGGEECSCSSCCCEEEEETTEEEECCC----SHH-------HHH-------TCSS-----SCHH----HHHHHHGGGGCC
T ss_pred cceeeecCccccceEEEECCEEEECCC----CHH-------Hhc-------cCCC-----CCHH----HHHHHhhhhhcC
Confidence 64222111 111234455664433311 100 000 0000 0000 001111111100
Q ss_pred CCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHHH--Hh------------h
Q 043512 178 RPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAGA--VS------------L 242 (487)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~--~~------------~ 242 (487)
. .......++.+|+++. +...+.+.++..+....|+.+. ++++...+ +. +
T Consensus 142 ~--------------~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 206 (478)
T 2ivd_A 142 R--------------APEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGA 206 (478)
T ss_dssp C--------------CCTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHH
T ss_pred C--------------CCCCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHH
Confidence 0 0013456788888774 4566666667777777777665 45542211 00 0
Q ss_pred h------------c-CC----CCceEeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEE---ccCceEecCEE
Q 043512 243 A------------G-SG----GGLWAVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNS---TKGNSYTCQIT 302 (487)
Q Consensus 243 ~------------~-~~----~g~~~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~---~~G~~~~ad~V 302 (487)
. . .. .+.++++||+++++++|++.+|++|+++++|++|..+++++.|++ .+|+++.||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~v 286 (478)
T 2ivd_A 207 IRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQV 286 (478)
T ss_dssp HHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEE
T ss_pred HHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEE
Confidence 0 1 11 467899999999999999999999999999999998877788887 67878999999
Q ss_pred EEccCCCCCCeeecCCC
Q 043512 303 VVATPLDELNLHFSPPI 319 (487)
Q Consensus 303 V~a~~~~~~~~~l~p~~ 319 (487)
|+|+|++.... +.|++
T Consensus 287 V~a~~~~~~~~-ll~~l 302 (478)
T 2ivd_A 287 VLAAPAHATAK-LLRPL 302 (478)
T ss_dssp EECSCHHHHHH-HHTTT
T ss_pred EECCCHHHHHH-Hhhcc
Confidence 99999986532 33544
No 15
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.89 E-value=1.8e-22 Score=208.62 Aligned_cols=270 Identities=16% Similarity=0.174 Sum_probs=158.9
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEe--eCCeEecccceeEecCChhHHHHHHH
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVT--ISGQTFEAGASILHPKNYHTVNFTKL 95 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~--~~g~~~d~G~~~~~~~~~~~~~~~~~ 95 (487)
....+||+|||||++||+||+.|++ .|++|+|+|+++++||++.+.. ..|+.+|+|+++++.....+.+++++
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~-----~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 104 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAG-----AGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRK 104 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHH-----HTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHh-----CCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHH
Confidence 3446899999999999999999999 9999999999999999999887 46889999999998877778899999
Q ss_pred cCCCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhc
Q 043512 96 LNLKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESF 175 (487)
Q Consensus 96 lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (487)
+|+.......... ..+...+|......... .....+...+ .+. ..+. ....++.....++......+
T Consensus 105 ~g~~~~~~~~~~~-~~~~~~~g~~~~~~~~~-~~~~~~~~~~---~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~ 171 (498)
T 2iid_A 105 FDLRLNEFSQEND-NAWYFIKNIRKKVGEVK-KDPGLLKYPV---KPS-----EAGK---SAGQLYEESLGKVVEELKRT 171 (498)
T ss_dssp TTCCEEEECSCCT-TSEEEETTEEEEHHHHH-HCGGGGCCCC---CGG-----GTTC---CHHHHHHHHTHHHHHHHHHS
T ss_pred hCCCceeecccCC-ccEEEeCCeeecccccc-cCccccccCC---Ccc-----ccCC---CHHHHHHHHHHHHHHHHhhc
Confidence 9986432211111 01223333222110000 0000000000 000 0000 00011111111110000000
Q ss_pred cCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcC-CCHHHHHHHHHHHHHhhcCCCC-CcchHHHHHh--hhcCCCCceE
Q 043512 176 ETRPVFESVDEMLKWAGLFNLTARSLEEELIDAR-LSPLLMQELVTIITRINYGQSL-SISGLAGAVS--LAGSGGGLWA 251 (487)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~--~~~~~~g~~~ 251 (487)
...... ..+...++.+|+...+ ++....+.+.. ++. .... ..+....+.. ......+.++
T Consensus 172 -------~~~~~~-----~~~~~~s~~~~l~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (498)
T 2iid_A 172 -------NCSYIL-----NKYDTYSTKEYLIKEGDLSPGAVDMIGD-LLN---EDSGYYVSFIESLKHDDIFAYEKRFDE 235 (498)
T ss_dssp -------CHHHHH-----HHHTTSBHHHHHHHTSCCCHHHHHHHHH-HTT---CGGGTTSBHHHHHHHHHHHTTCCCEEE
T ss_pred -------cHHHHH-----HHhhhhhHHHHHHHccCCCHHHHHHHHH-hcC---cccchhHHHHHHHHHHhccccCcceEE
Confidence 011111 1234467788888765 44443322211 110 0001 1111111111 1122334678
Q ss_pred eecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCc----eEecCEEEEccCCCCC-CeeecCCCCC
Q 043512 252 VEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGN----SYTCQITVVATPLDEL-NLHFSPPISI 321 (487)
Q Consensus 252 ~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~----~~~ad~VV~a~~~~~~-~~~l~p~~~~ 321 (487)
++||+++++++|++.++.+|+++++|++|..+++++.|++.+|+ +++||+||+|+|+... .+.|.|++|.
T Consensus 236 ~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~ 310 (498)
T 2iid_A 236 IVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLP 310 (498)
T ss_dssp ETTCTTHHHHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCH
T ss_pred eCCcHHHHHHHHHHhcccccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCH
Confidence 99999999999999887799999999999998888988887774 4799999999999864 4667787754
No 16
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.87 E-value=3.9e-21 Score=197.17 Aligned_cols=252 Identities=17% Similarity=0.240 Sum_probs=144.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCCCccceeEEEeeCCeEecccceeEec----CChhHHHHHH
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNGVVGGRMATVTISGQTFEAGASILHP----KNYHTVNFTK 94 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~----~~~~~~~~~~ 94 (487)
..+||+|||||++||++|+.|++ .|+ +|+|+|+++++||++.+....|+.+|.|++|++. ....+.++++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~-----~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 77 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE-----AGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVN 77 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH-----TTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-----cCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHH
Confidence 45799999999999999999999 998 8999999999999999999999999999999983 3345668888
Q ss_pred H-cCCCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhh
Q 043512 95 L-LNLKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYE 173 (487)
Q Consensus 95 ~-lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (487)
+ +|+.............+...+|..+. ... ........ .....+.+ .+ ..
T Consensus 78 ~~lgl~~~~~~~~~~~~~~~~~~g~~~~-----------~~~-~~~~~~~~----------~~~~~~~~----~~---~~ 128 (472)
T 1b37_A 78 STLKLRNFRSDFDYLAQNVYKEDGGVYD-----------EDY-VQKRIELA----------DSVEEMGE----KL---SA 128 (472)
T ss_dssp TTSCCCEEECCCTTGGGCEECSSSSBCC-----------HHH-HHHHHHHH----------HHHHHHHH----HH---HH
T ss_pred hhcCCceeeccCccccceeEcCCCCCCC-----------HHH-HHHHHHHH----------HHHHHHHH----HH---HH
Confidence 8 88764321111100001111222111 000 00000000 00111111 11 11
Q ss_pred hccCCCCCCCHHHHHHHcCChhhhcccHH--HHHHHcCC--CHHHHHHHHHHHH-HhhcCCCCCcchHHHH---HhhhcC
Q 043512 174 SFETRPVFESVDEMLKWAGLFNLTARSLE--EELIDARL--SPLLMQELVTIIT-RINYGQSLSISGLAGA---VSLAGS 245 (487)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~--~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~---~~~~~~ 245 (487)
.+.. ... .+.++. +++.+... .....+.++..+. ...++.+.+..++..+ ..+...
T Consensus 129 ~~~~-~~~---------------~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 192 (472)
T 1b37_A 129 TLHA-SGR---------------DDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPLATFSDF 192 (472)
T ss_dssp TSCT-TCT---------------TCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSCHHHHHH
T ss_pred hhcc-ccc---------------hhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccccccccc
Confidence 1100 000 111111 23332210 0000111222222 1223333221111111 011111
Q ss_pred CCCceE--eecchHHHHHHHHHhc-----------CCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCCC
Q 043512 246 GGGLWA--VEGGNWQMAAGLINRS-----------DVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDELN 312 (487)
Q Consensus 246 ~~g~~~--~~gG~~~l~~~l~~~~-----------G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~~ 312 (487)
..+.+. ++||++.++++|++.+ |++|+++++|++|..+++++.|++.+|++++||+||+|+|++.+.
T Consensus 193 ~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~ 272 (472)
T 1b37_A 193 GDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQ 272 (472)
T ss_dssp CSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHH
T ss_pred CCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhc
Confidence 223343 3799999999998864 678999999999999988899999999899999999999998642
Q ss_pred ---eeecCCCCC
Q 043512 313 ---LHFSPPISI 321 (487)
Q Consensus 313 ---~~l~p~~~~ 321 (487)
+.|.|+++.
T Consensus 273 ~~~~~~~p~Lp~ 284 (472)
T 1b37_A 273 SDLIQFKPKLPT 284 (472)
T ss_dssp TTSSEEESCCCH
T ss_pred cCCeeECCCCCH
Confidence 456777653
No 17
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.86 E-value=1.6e-20 Score=201.16 Aligned_cols=255 Identities=17% Similarity=0.229 Sum_probs=150.6
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEee-CCeEecccceeEecCC-hhHHHHHHH
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTI-SGQTFEAGASILHPKN-YHTVNFTKL 95 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~-~g~~~d~G~~~~~~~~-~~~~~~~~~ 95 (487)
....+||+|||||++||+||+.|++ .|++|+|+|+++++|||+++... +|..+|.|++++++.. ..+..+.++
T Consensus 333 ~~~~~~v~viG~G~~Gl~aA~~l~~-----~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~ 407 (776)
T 4gut_A 333 DYHNKSVIIIGAGPAGLAAARQLHN-----FGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQ 407 (776)
T ss_dssp GGTSCEEEEECCSHHHHHHHHHHHH-----HTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHH
Confidence 3446899999999999999999999 99999999999999999999864 5889999999998753 345678889
Q ss_pred cCCCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhc
Q 043512 96 LNLKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESF 175 (487)
Q Consensus 96 lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (487)
+|+.......... +...+| .+.. ..+...... .+..+++ ........
T Consensus 408 lGl~~~~~~~~~~---l~~~~g-~~~~--------~~~~~~~~~----------------~~~~ll~----~~~~~~~~- 454 (776)
T 4gut_A 408 LGISMHKFGERCD---LIQEGG-RITD--------PTIDKRMDF----------------HFNALLD----VVSEWRKD- 454 (776)
T ss_dssp HTCCCEECCSCCC---EECTTS-CBCC--------HHHHHHHHH----------------HHHHHHH----HHHHHGGG-
T ss_pred hCCcccccccccc---eEccCC-cccc--------hhHHHHHHH----------------HHHHHHH----HHHHHhhc-
Confidence 9986543321111 111111 1110 000000000 0000110 00111100
Q ss_pred cCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHH----HHHHHHHHhhcCCCC-CcchHH--HHHhhhcCCCC
Q 043512 176 ETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQ----ELVTIITRINYGQSL-SISGLA--GAVSLAGSGGG 248 (487)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~g~~~-~~~~~~--~~~~~~~~~~g 248 (487)
.......++.+. ....+.+++...++.....+ .+....+...+|..+ .++... ....+......
T Consensus 455 ~~~~~d~sl~~~---------~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~ 525 (776)
T 4gut_A 455 KTQLQDVPLGEK---------IEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGD 525 (776)
T ss_dssp CCGGGCCBHHHH---------HHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSC
T ss_pred ccccccccHHHH---------HHHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCC
Confidence 000001111111 11223445555444211110 011111222334333 233211 11111122334
Q ss_pred ceEeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC---CeeecCCCCC
Q 043512 249 LWAVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL---NLHFSPPISI 321 (487)
Q Consensus 249 ~~~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~---~~~l~p~~~~ 321 (487)
.+.+.+|++.++++|++ |++|+++++|++|..+++++.|++.+|+++.||+||+|+|+..+ .+.|.|++|.
T Consensus 526 ~~~~~~G~~~l~~aLa~--gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~ 599 (776)
T 4gut_A 526 HTLLTPGYSVIIEKLAE--GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSE 599 (776)
T ss_dssp EEECTTCTHHHHHHHHT--TSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCH
T ss_pred eEEECChHHHHHHHHHh--CCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCH
Confidence 66789999999999986 56999999999999988889999999989999999999999864 3578888764
No 18
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.86 E-value=8.7e-21 Score=201.79 Aligned_cols=78 Identities=26% Similarity=0.362 Sum_probs=68.7
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecC-ChhHHHHHHHc
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPK-NYHTVNFTKLL 96 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~-~~~~~~~~~~l 96 (487)
....+||+|||||++||+||+.|++ .|++|+|+|+++++||++.+++..++.+|+|+++++.. ...+..+.+++
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~-----~g~~v~~~e~~~~~gg~~~~~~~~~~~~~~G~~~~~~~~~~~~~~l~~~l 178 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQS-----FGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQV 178 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHH-----TTCEEEEECSSSSSBTTCCEEEETTEEEESSCCEECCSBTCHHHHHHHHH
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHH-----CCCeEEEEecCCCCCCccccccccCchhhcCcEEEeCCCCchHHHHHHHh
Confidence 3456899999999999999999999 99999999999999999999999999999999998864 33455788888
Q ss_pred CCCC
Q 043512 97 NLKP 100 (487)
Q Consensus 97 gl~~ 100 (487)
++..
T Consensus 179 ~~~~ 182 (662)
T 2z3y_A 179 NMEL 182 (662)
T ss_dssp TCCE
T ss_pred Ccch
Confidence 8754
No 19
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.86 E-value=6.9e-21 Score=193.97 Aligned_cols=254 Identities=14% Similarity=0.177 Sum_probs=151.1
Q ss_pred CCCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCC-eE---------------eccc-
Q 043512 16 PTFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISG-QT---------------FEAG- 78 (487)
Q Consensus 16 ~~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g-~~---------------~d~G- 78 (487)
...+..+||||||||++||+||+.|++ +|++|+|+||++++||+++++..+| +. ++.|
T Consensus 6 ~~~~~~~dvvVIGaG~~GL~aA~~La~-----~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~ 80 (453)
T 2bcg_G 6 ETIDTDYDVIVLGTGITECILSGLLSV-----DGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDR 80 (453)
T ss_dssp -CCCCBCSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGG
T ss_pred hhccccCCEEEECcCHHHHHHHHHHHH-----CCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhccccc
Confidence 344567899999999999999999999 9999999999999999999987655 22 2333
Q ss_pred -------ceeEecCChhHHHHHHHcCCCCCCCCC-CCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHh
Q 043512 79 -------ASILHPKNYHTVNFTKLLNLKPKDPPS-SEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRY 150 (487)
Q Consensus 79 -------~~~~~~~~~~~~~~~~~lgl~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (487)
++++... ..+.++++.+|+....... ... .+.+.+|+.+.+..+. ...+...+.++.+.
T Consensus 81 ~~~~~l~P~~l~~~-~~l~~ll~~lg~~~~l~~~~~~~--~~~~~~g~~~~~p~~~---~~~~~~~l~~~~~~------- 147 (453)
T 2bcg_G 81 DWNVDLIPKFLMAN-GELTNILIHTDVTRYVDFKQVSG--SYVFKQGKIYKVPANE---IEAISSPLMGIFEK------- 147 (453)
T ss_dssp GCCEESSCCBEETT-SHHHHHHHHHTGGGTCCEEECCC--EEEEETTEEEECCSSH---HHHHHCTTSCHHHH-------
T ss_pred ceeeccccceeecC-cHHHHHHHhcCCccceEEEEccc--eeEEeCCeEEECCCCh---HHHHhhhccchhhH-------
Confidence 4443333 3456888999975432211 111 2334566544432110 00111111111111
Q ss_pred cCChHHHhHHHHHHHHHHHHhhhhccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCC-
Q 043512 151 GLSLLRMESFTESAVDKFLKYYESFETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQ- 229 (487)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~- 229 (487)
..+.++++.... ... . .+..+ ........++.+|+++.+.++.+..-+ ...... .+.
T Consensus 148 ----~~~~~~~~~~~~----~~~----~----~p~~~----~~~~~~~~s~~~~l~~~~~~~~l~~~l-~~~~~l-~~~~ 205 (453)
T 2bcg_G 148 ----RRMKKFLEWISS----YKE----D----DLSTH----QGLDLDKNTMDEVYYKFGLGNSTKEFI-GHAMAL-WTND 205 (453)
T ss_dssp ----HHHHHHHHHHHH----CBT----T----BGGGS----TTCCTTTSBHHHHHHHTTCCHHHHHHH-HHHTSC-CSSS
T ss_pred ----HHHHHHHHHHHH----hcc----C----Cchhh----hccccccCCHHHHHHHhCCCHHHHHHH-HHHHHh-ccCc
Confidence 112222222111 110 0 00000 011235678999999888877765432 111110 011
Q ss_pred CC-CcchHHHH---Hh----hhcCCCCce-EeecchHHHHHHHHHh---cCCeEEeCCceEEEEEe--CCEE-EEEEccC
Q 043512 230 SL-SISGLAGA---VS----LAGSGGGLW-AVEGGNWQMAAGLINR---SDVALHLHEEIESISYL--REYY-ELNSTKG 294 (487)
Q Consensus 230 ~~-~~~~~~~~---~~----~~~~~~g~~-~~~gG~~~l~~~l~~~---~G~~i~~~~~V~~I~~~--~~~v-~V~~~~G 294 (487)
++ ..++...+ .. +..+..+.| +|+||+++++++|++. .|++|+++++|++|..+ ++++ +|++ +|
T Consensus 206 ~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g 284 (453)
T 2bcg_G 206 DYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KL 284 (453)
T ss_dssp GGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TT
T ss_pred cccCCchHHHHHHHHHHHHHHHhhcCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CC
Confidence 11 11322222 11 122334667 9999999999999864 49999999999999988 7776 6777 57
Q ss_pred ceEecCEEEEccCCCC
Q 043512 295 NSYTCQITVVATPLDE 310 (487)
Q Consensus 295 ~~~~ad~VV~a~~~~~ 310 (487)
+++.||.||+|++++.
T Consensus 285 ~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 285 GTFKAPLVIADPTYFP 300 (453)
T ss_dssp EEEECSCEEECGGGCG
T ss_pred eEEECCEEEECCCccc
Confidence 7899999999999974
No 20
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.86 E-value=1.4e-20 Score=184.80 Aligned_cols=281 Identities=16% Similarity=0.159 Sum_probs=162.1
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC-CCccceeEEEe----------eCCeEecccceeEecCC
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN-GVVGGRMATVT----------ISGQTFEAGASILHPKN 86 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~-~~~GGr~~s~~----------~~g~~~d~G~~~~~~~~ 86 (487)
.+..+||+|||||++||+||+.|++ +|++|+|||++ +++|||+.+.. ..++.+|.|++++...+
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~-----~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~ 115 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTR-----AGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFH 115 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHH-----TSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHH-----CCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchH
Confidence 3456899999999999999999999 99999999999 99999999987 35788999999998888
Q ss_pred hhHHHHHHHcCCCCCCCCCCC------------CCceEEEEcCCeeEEEeccC---------CCCcchhhhh----HHHH
Q 043512 87 YHTVNFTKLLNLKPKDPPSSE------------DSTAFGIWDGSKFVFKTISV---------SSTVPFVQKI----VSLA 141 (487)
Q Consensus 87 ~~~~~~~~~lgl~~~~~~~~~------------~~~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~----~~~~ 141 (487)
..+.++++++|+......... .......|++.++......+ +..+-+.... ....
T Consensus 116 ~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~~~~~ 195 (376)
T 2e1m_A 116 PLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRRAQYA 195 (376)
T ss_dssp HHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEHHHHH
T ss_pred HHHHHHHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceecccccc
Confidence 888899999998754322111 00112334444333211000 0000000000 0000
Q ss_pred HHHHHH-HHhcCChH----HHhHHHHHHHHHHHHhhhh-ccCCC----CCCCHHHHHHHcCChhhhcccHHHHHH-HcCC
Q 043512 142 NSVLMV-LRYGLSLL----RMESFTESAVDKFLKYYES-FETRP----VFESVDEMLKWAGLFNLTARSLEEELI-DARL 210 (487)
Q Consensus 142 ~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 210 (487)
.....+ ..|+.... ....++....+.+...+.. ..... .+......+. .....++..++.+|+. ..++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lD~~S~~~~L~~~~g~ 274 (376)
T 2e1m_A 196 TDPSSINEGFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWA-DVVRDFDGYSMGRFLREYAEF 274 (376)
T ss_dssp HCTHHHHHHTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHHHHHH-HHHHHHTTCBHHHHHHHTSCC
T ss_pred cCHHHhccccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhhccch-HHHHHHhCCCHHHHHhhccCC
Confidence 001111 12332221 1233344444445444321 00000 0110011111 1122457889999999 7888
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhhc--CCCCceEeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEE
Q 043512 211 SPLLMQELVTIITRINYGQSLSISGLAGAVSLAG--SGGGLWAVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYE 288 (487)
Q Consensus 211 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~g~~~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~ 288 (487)
++..++.+.. + .++++..+++.+..+..... .....+.+.||+++|+++|++.++.+|++|++|++|...++++.
T Consensus 275 s~~~~~~~~~-~--~~~~~~~~~s~l~~l~~~~~~~~~~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~~~~gv~ 351 (376)
T 2e1m_A 275 SDEAVEAIGT-I--ENMTSRLHLAFFHSFLGRSDIDPRATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEYYDPGRD 351 (376)
T ss_dssp CHHHHHHHHH-H--TTCTTTTTSBHHHHHHHCSCSCTTCCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEECCCC--
T ss_pred CHHHHHHHHh-h--cCccccchhhHHHHHHHhhhhccCCceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEECCCceE
Confidence 8877654322 2 25555445665555543322 22346789999999999999999889999999999999887776
Q ss_pred EEEccCceEecCEEEEccC
Q 043512 289 LNSTKGNSYTCQITVVATP 307 (487)
Q Consensus 289 V~~~~G~~~~ad~VV~a~~ 307 (487)
|.+.+.......+|.+.+-
T Consensus 352 v~~~~~~~~~g~~~~~~~~ 370 (376)
T 2e1m_A 352 GHHGELTGPGGPAVAIQTV 370 (376)
T ss_dssp -----------CCEEEEEE
T ss_pred EEeCCCcCCCCCeeEEEec
Confidence 5544433445566666553
No 21
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.85 E-value=1.4e-21 Score=200.89 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=157.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCCCccceeEEEee-CCeEecccceeEecC---ChhHHHHHH
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNGVVGGRMATVTI-SGQTFEAGASILHPK---NYHTVNFTK 94 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~~~GGr~~s~~~-~g~~~d~G~~~~~~~---~~~~~~~~~ 94 (487)
++||+|||||++||+||++|++ +|+ +|+|||+++++||++++... +|+.+|.|++++... +..+.++++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~-----~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~ 76 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSR-----APCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVS 76 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHT-----SSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHH
T ss_pred CceEEEECCcHHHHHHHHHHHh-----CCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHH
Confidence 4799999999999999999999 999 99999999999999999876 589999999988653 345668999
Q ss_pred HcCCCCCCCCCCC----CCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHH
Q 043512 95 LLNLKPKDPPSSE----DSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLK 170 (487)
Q Consensus 95 ~lgl~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (487)
++|+......... ....+.+.+|....+... ...+......+. .... ..
T Consensus 77 ~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~----~~~~~~~~~~~~------------~~~~-----------~~ 129 (477)
T 3nks_A 77 ELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTG----LRGLLRPSPPFS------------KPLF-----------WA 129 (477)
T ss_dssp HTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCS----SCC---CCTTSC------------SCSS-----------HH
T ss_pred HcCCcceeeecCCCCchhcceEEEECCEEEECCCC----hhhcccccchhh------------hHHH-----------HH
Confidence 9998743221100 001234445544443211 110100000000 0000 00
Q ss_pred hhhhccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHHH---Hhh----
Q 043512 171 YYESFETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAGA---VSL---- 242 (487)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~---~~~---- 242 (487)
....+ +. ........++.+|+.+. +...+.+.++.++....|+.+. +++....+ ..+
T Consensus 130 ~~~~~-----~~---------~~~~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~ 194 (477)
T 3nks_A 130 GLREL-----TK---------PRGKEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTH 194 (477)
T ss_dssp HHTTT-----TS---------CCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHH
T ss_pred HHHhh-----hc---------CCCCCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHc
Confidence 00000 00 00112346777777662 3455666677777777777665 45443211 100
Q ss_pred -------------------------hcCCCCceEeecchHHHHHHHHHhc---CCeEEeCCceEEEEEeCCE-EEEEEcc
Q 043512 243 -------------------------AGSGGGLWAVEGGNWQMAAGLINRS---DVALHLHEEIESISYLREY-YELNSTK 293 (487)
Q Consensus 243 -------------------------~~~~~g~~~~~gG~~~l~~~l~~~~---G~~i~~~~~V~~I~~~~~~-v~V~~~~ 293 (487)
.....+.++++||+++++++|++.+ |++|+++++|++|..++++ +.|++.
T Consensus 195 gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~- 273 (477)
T 3nks_A 195 RSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR- 273 (477)
T ss_dssp SCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-
T ss_pred CCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-
Confidence 0012357899999999999998754 8999999999999988766 788774
Q ss_pred CceEecCEEEEccCCCCCC
Q 043512 294 GNSYTCQITVVATPLDELN 312 (487)
Q Consensus 294 G~~~~ad~VV~a~~~~~~~ 312 (487)
|+++.||+||+|+|++...
T Consensus 274 ~~~~~ad~vv~a~p~~~~~ 292 (477)
T 3nks_A 274 DSSLEADHVISAIPASVLS 292 (477)
T ss_dssp SCEEEESEEEECSCHHHHH
T ss_pred CeEEEcCEEEECCCHHHHH
Confidence 4589999999999998653
No 22
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.85 E-value=5.1e-21 Score=206.24 Aligned_cols=78 Identities=26% Similarity=0.362 Sum_probs=68.5
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecC-ChhHHHHHHHc
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPK-NYHTVNFTKLL 96 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~-~~~~~~~~~~l 96 (487)
....+||+|||||++||+||+.|++ .|++|+|||+++++||++.+++..++.+|+|+++++.. ...+..+.+++
T Consensus 275 ~~~~~~v~viG~G~aGl~~A~~l~~-----~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~G~~~~~~~~~~~~~~l~~~l 349 (852)
T 2xag_A 275 TKKTGKVIIIGSGVSGLAAARQLQS-----FGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQV 349 (852)
T ss_dssp SSCCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSSCTTCCEEEETTEEEESSCCEECCSBTCHHHHHHHHT
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHH-----CCCcEEEEEecCcCCCceeeecccccchhcCceEecCCCCchHHHHHHHh
Confidence 3456899999999999999999999 99999999999999999999999999999999998864 23455778888
Q ss_pred CCCC
Q 043512 97 NLKP 100 (487)
Q Consensus 97 gl~~ 100 (487)
++..
T Consensus 350 g~~~ 353 (852)
T 2xag_A 350 NMEL 353 (852)
T ss_dssp TCCE
T ss_pred CCch
Confidence 8754
No 23
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.85 E-value=2.1e-20 Score=189.24 Aligned_cols=254 Identities=12% Similarity=0.120 Sum_probs=157.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEe-----e----------------CCeEecc
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVT-----I----------------SGQTFEA 77 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~-----~----------------~g~~~d~ 77 (487)
+..+||+|||||++|+++|+.|++ +|++|+|+|+++++||+++|+. . .++.+|+
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~-----~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~ 78 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSV-----NGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDL 78 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEES
T ss_pred CCcCCEEEECcCHHHHHHHHHHHH-----CCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEcc
Confidence 346899999999999999999999 9999999999999999999988 1 4577899
Q ss_pred cceeEecCChhHHHHHHHcCCCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHH
Q 043512 78 GASILHPKNYHTVNFTKLLNLKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRM 157 (487)
Q Consensus 78 G~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (487)
|++++.... .+.++++++|+.......... ..+.+.+|+.+.+..+. ...+...+.++.+. ..+
T Consensus 79 gP~~l~~~~-~l~~ll~~lgl~~~l~~~~~~-~~~~~~~g~~~~~p~~~---~~~~~~~l~~~~~~-----------~~~ 142 (433)
T 1d5t_A 79 IPKFLMANG-QLVKMLLYTEVTRYLDFKVVE-GSFVYKGGKIYKVPSTE---TEALASNLMGMFEK-----------RRF 142 (433)
T ss_dssp SCCBEETTS-HHHHHHHHHTGGGGCCEEECC-EEEEEETTEEEECCCSH---HHHHHCSSSCHHHH-----------HHH
T ss_pred Ccceeeccc-hHHHHHHHcCCccceEEEEeC-ceEEeeCCEEEECCCCH---HHHhhCcccChhhH-----------HHH
Confidence 999888765 456888999976432211111 11334455444432110 00011111111110 112
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCC-CCCcchH
Q 043512 158 ESFTESAVDKFLKYYESFETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQ-SLSISGL 236 (487)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~ 236 (487)
.++++.. ..+... .... ....+....++.+|+++.+.++.+.+.+. ..+....+. +.+.++.
T Consensus 143 ~~~~~~~--------~~~~~~----~p~~----~~~~~~~~~s~~~~l~~~~~~~~l~~~l~-~~~~~~~~~~~~~~p~~ 205 (433)
T 1d5t_A 143 RKFLVFV--------ANFDEN----DPKT----FEGVDPQNTSMRDVYRKFDLGQDVIDFTG-HALALYRTDDYLDQPCL 205 (433)
T ss_dssp HHHHHHH--------HHCCTT----CGGG----GTTCCTTTSBHHHHHHHTTCCHHHHHHHH-HHTSCCSSSGGGGSBSH
T ss_pred HHHHHHH--------Hhhccc----Cchh----ccccccccCCHHHHHHHcCCCHHHHHHHH-HHHHhccCCCccCCCHH
Confidence 2222211 111100 0000 01123456889999998888777654322 221111222 2234443
Q ss_pred ---HHHHhhhc----CCCC-ceEeecchHHHHHHHHHh---cCCeEEeCCceEEEEEeCCEEE-EEEccCceEecCEEEE
Q 043512 237 ---AGAVSLAG----SGGG-LWAVEGGNWQMAAGLINR---SDVALHLHEEIESISYLREYYE-LNSTKGNSYTCQITVV 304 (487)
Q Consensus 237 ---~~~~~~~~----~~~g-~~~~~gG~~~l~~~l~~~---~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~ 304 (487)
..+..+.. ...+ .++++||+++++++|++. .|++|+++++|++|..+++++. |+ .+|+++.||+||+
T Consensus 206 ~~~~~~~~~~~s~~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~-~~g~~~~ad~VV~ 284 (433)
T 1d5t_A 206 ETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVK-SEGEVARCKQLIC 284 (433)
T ss_dssp HHHHHHHHHHHSCCSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEE-ETTEEEECSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEE-ECCeEEECCEEEE
Confidence 33323222 1222 569999999999999764 5999999999999999888874 55 4777899999999
Q ss_pred ccCCCCC
Q 043512 305 ATPLDEL 311 (487)
Q Consensus 305 a~~~~~~ 311 (487)
|++++..
T Consensus 285 a~~~~~~ 291 (433)
T 1d5t_A 285 DPSYVPD 291 (433)
T ss_dssp CGGGCGG
T ss_pred CCCCCcc
Confidence 9999854
No 24
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.83 E-value=4e-20 Score=186.56 Aligned_cols=257 Identities=12% Similarity=0.132 Sum_probs=152.7
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeC--------------------CeEecc
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTIS--------------------GQTFEA 77 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~--------------------g~~~d~ 77 (487)
.+..+||+|||+|++|+++|+.|++ +|++|+|+||++++||++++...+ +|.+|+
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~-----~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL 91 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSH-----YGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDL 91 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEES
T ss_pred ccccCCEEEECCCHHHHHHHHHHHH-----CCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEee
Confidence 3456899999999999999999999 999999999999999999998642 468899
Q ss_pred cceeEecCChhHHHHHHHcCCCCCCCCCCCCCceEEEEcCC------eeEEEeccCCCCcc-hhhhhHHHHHHHHHHHHh
Q 043512 78 GASILHPKNYHTVNFTKLLNLKPKDPPSSEDSTAFGIWDGS------KFVFKTISVSSTVP-FVQKIVSLANSVLMVLRY 150 (487)
Q Consensus 78 G~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 150 (487)
+++++.... .+.+++...++.....+..... .+.+..+. .-.+... |.+... +.....++.++
T Consensus 92 ~P~~l~~~g-~L~~lL~~~gv~~ylef~~~~~-~y~~~~~~~~~~~~~g~~~~V-Pss~~e~~~~~lLs~~eK------- 161 (475)
T 3p1w_A 92 IPKFILVGG-NLVKILKKTRVTNYLEWLVVEG-SYVYQHQKKGFLTSEKFIHKV-PATDMEALVSPLLSLMEK------- 161 (475)
T ss_dssp SCCBEETTS-HHHHHHHHTTCGGGSCEEECSE-EEEEEEECCCSSSCCEEEEEC-CCSHHHHHTCTTSCHHHH-------
T ss_pred cCeEeecCc-HHHHHHHHCCchheeEEEecCc-ceEEecCccccccCCCceEeC-CCCHHHHhhccCCCHHHH-------
Confidence 998886655 3447777778765544321110 11221100 0111111 111111 11111111111
Q ss_pred cCChHHHhHHHHHHHHHHHHhhhhccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCC
Q 043512 151 GLSLLRMESFTESAVDKFLKYYESFETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQS 230 (487)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~ 230 (487)
.++.+|+.. ...+... .... ....+....++.+|+++.++.+.+.+.+..+..-......
T Consensus 162 ----~~l~kFL~~--------l~~~~~~----~~~~----~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~ 221 (475)
T 3p1w_A 162 ----NRCKNFYQY--------VSEWDAN----KRNT----WDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDY 221 (475)
T ss_dssp ----HHHHHHHHH--------HHHCCTT----CGGG----STTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGG
T ss_pred ----HHHHHHHHH--------HHhhhhc----cchh----hhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCc
Confidence 122222221 1111000 0000 0012235678999999999988877543222111111111
Q ss_pred CCcchHHHH---Hhh----hcC-CCCceEeecchHHHHHHHHH---hcCCeEEeCCceEEEEE-eCCEE-EEEEccCceE
Q 043512 231 LSISGLAGA---VSL----AGS-GGGLWAVEGGNWQMAAGLIN---RSDVALHLHEEIESISY-LREYY-ELNSTKGNSY 297 (487)
Q Consensus 231 ~~~~~~~~~---~~~----~~~-~~g~~~~~gG~~~l~~~l~~---~~G~~i~~~~~V~~I~~-~~~~v-~V~~~~G~~~ 297 (487)
.+.++...+ ..+ ..+ ..+..+|+||+++++++|++ ..|++|+++++|++|.. +++++ +|++.+|+++
T Consensus 222 ~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i 301 (475)
T 3p1w_A 222 LKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIA 301 (475)
T ss_dssp GGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred ccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEE
Confidence 123432211 111 112 23467999999999999976 45999999999999998 55654 8999999899
Q ss_pred ecCEEEEccCCC
Q 043512 298 TCQITVVATPLD 309 (487)
Q Consensus 298 ~ad~VV~a~~~~ 309 (487)
.||+||+|++..
T Consensus 302 ~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 302 YCDKVICDPSYV 313 (475)
T ss_dssp EEEEEEECGGGC
T ss_pred ECCEEEECCCcc
Confidence 999999999875
No 25
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.83 E-value=4.6e-21 Score=191.94 Aligned_cols=231 Identities=15% Similarity=0.190 Sum_probs=147.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCC-CCeEEEEecCCCccceeEEEee--CCeEe-cccceeEecCChhHHHHHHH
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNW-HPRILMFERNGVVGGRMATVTI--SGQTF-EAGASILHPKNYHTVNFTKL 95 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~-G~~V~VlE~~~~~GGr~~s~~~--~g~~~-d~G~~~~~~~~~~~~~~~~~ 95 (487)
..+||+|||||++||+||+.|++ + |++|+|+|+++++||++++... +|+.+ +.|+++++..+..+.+++++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~-----~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~ 80 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVAT-----QLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQ 80 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHH-----HSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTT
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-----hCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHH
Confidence 46899999999999999999999 8 9999999999999999999988 68887 59999999888888889888
Q ss_pred cCCCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhc
Q 043512 96 LNLKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESF 175 (487)
Q Consensus 96 lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (487)
+++... ... ....+.+|+.+.+.. . ... +..++.....+.....+ +.......
T Consensus 81 ~g~~~~--~~~---~~~~~~~G~~~~~p~----~-------~~~----~~~l~~~~~~~~~~~~~-------l~~~~~~~ 133 (399)
T 1v0j_A 81 FTDFTD--YRH---RVFAMHNGQAYQFPM----G-------LGL----VSQFFGKYFTPEQARQL-------IAEQAAEI 133 (399)
T ss_dssp TCCBCC--CCC---CEEEEETTEEEEESS----S-------HHH----HHHHHTSCCCHHHHHHH-------HHHHGGGS
T ss_pred hhhhhc--ccc---ceEEEECCEEEeCCC----C-------HHH----HHHHhcccCCHHHHHHH-------HHHHhhcc
Confidence 886221 111 124445665555421 0 000 11111111011111111 11111100
Q ss_pred cCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHH--HHhhhcCC----CC
Q 043512 176 ETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAG--AVSLAGSG----GG 248 (487)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~--~~~~~~~~----~g 248 (487)
......++.+|+.+ .+...+.+.++..++...++.+. ++++... +....... ..
T Consensus 134 ------------------~~~~~~s~~e~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~ 194 (399)
T 1v0j_A 134 ------------------DTADAQNLEEKAIS-LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSD 194 (399)
T ss_dssp ------------------CTTC----CCHHHH-HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCC
T ss_pred ------------------CCCCcccHHHHHHH-HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhh
Confidence 00123456666665 34456666677777777777665 5665433 11111111 11
Q ss_pred ce--EeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceE-ecCEEEEccCCCCC
Q 043512 249 LW--AVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSY-TCQITVVATPLDEL 311 (487)
Q Consensus 249 ~~--~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~-~ad~VV~a~~~~~~ 311 (487)
.| +|+||+++++++|++.+|++|++|++|++|..+ | + ++ .||+||+|+|+...
T Consensus 195 ~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~~-----v---~--~~~~aD~VI~t~p~~~l 250 (399)
T 1v0j_A 195 TYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQ-----L---R--PGSPAAPVVYTGPLDRY 250 (399)
T ss_dssp SEEECBTTHHHHHHHHHTCSTTEEEECSCCHHHHHHH-----H---T--TTSTTCCEEECSCHHHH
T ss_pred hhcccccccHHHHHHHHHhcCCeEEEECCchhhhhhh-----h---h--hcccCCEEEECCcHHHH
Confidence 34 899999999999999889999999999999642 2 1 45 79999999999753
No 26
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.82 E-value=4.4e-20 Score=190.26 Aligned_cols=244 Identities=15% Similarity=0.174 Sum_probs=141.3
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEee-----------------CCeEecccce
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTI-----------------SGQTFEAGAS 80 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~-----------------~g~~~d~G~~ 80 (487)
.+..+||+|||||++||+||+.|++ +|++|+|||+++++||++++... +|..+|.|++
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~-----~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 82 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQK-----AGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGAT 82 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHH-----CCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchh
Confidence 3457899999999999999999999 99999999999999999998875 5678999999
Q ss_pred eEecCChhHHHHHHHcCCCCCCCCCCCCCceEEE-Ec-----CCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCCh
Q 043512 81 ILHPKNYHTVNFTKLLNLKPKDPPSSEDSTAFGI-WD-----GSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSL 154 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~-~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (487)
++...+ .+.++++++|+.......... ..+.+ .+ |..+.+ ......+...
T Consensus 83 ~~~~~~-~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~----------- 138 (489)
T 2jae_A 83 RIPQSH-ITLDYCRELGVEIQGFGNQNA-NTFVNYQSDTSLSGQSVTY-----------RAAKADTFGY----------- 138 (489)
T ss_dssp CEETTS-THHHHHHHHTCCEEEECCCCT-TSEEECCCSSTTTTCCEEH-----------HHHHHHHHHH-----------
T ss_pred hcccHH-HHHHHHHHcCCceEEccccCC-CceEEecCCcccCCccccH-----------HHHhhhhhcc-----------
Confidence 888766 778999999987533221111 01222 22 222211 1110011000
Q ss_pred HHHhHHHHHHHHHHHHhhhhccCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcC-------CCHHHHHHHH-HHHHHhh
Q 043512 155 LRMESFTESAVDKFLKYYESFETRPVFESVDEMLKWAGLFNLTARSLEEELIDAR-------LSPLLMQELV-TIITRIN 226 (487)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~-~~~~~~~ 226 (487)
+.+....+.... .+. ..+. .....++.+|+.+.+ +.......+. .......
T Consensus 139 ------~~~l~~~~~~~~-~~~--~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (489)
T 2jae_A 139 ------MSELLKKATDQG-ALD--QVLS------------REDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLN 197 (489)
T ss_dssp ------HHHHHHHHHHHT-TTT--TTSC------------HHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTC
T ss_pred ------HHHHHHHHHhcc-ccc--cccc------------hhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccc
Confidence 000000010000 000 0000 001123333333210 0000000000 0000000
Q ss_pred cCC---CCCcchHHH--HHhh------hcCCCCceEeecchHHHHHHHHHhcC-CeEEeCCceEEEEEeCCEEEEEEccC
Q 043512 227 YGQ---SLSISGLAG--AVSL------AGSGGGLWAVEGGNWQMAAGLINRSD-VALHLHEEIESISYLREYYELNSTKG 294 (487)
Q Consensus 227 ~g~---~~~~~~~~~--~~~~------~~~~~g~~~~~gG~~~l~~~l~~~~G-~~i~~~~~V~~I~~~~~~v~V~~~~G 294 (487)
.+. +.++..+.. +..+ .....+.++++||+++|+++|++.++ ++|+++++|++|..+++++.|++.+|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g 277 (489)
T 2jae_A 198 FGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAG 277 (489)
T ss_dssp CCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEET
T ss_pred cCCCCCCcCHHHHhhhhHHHHHhhhhccccCccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecC
Confidence 000 001111111 0000 11123477899999999999999988 89999999999999999999988776
Q ss_pred ---ceEecCEEEEccCCCCC
Q 043512 295 ---NSYTCQITVVATPLDEL 311 (487)
Q Consensus 295 ---~~~~ad~VV~a~~~~~~ 311 (487)
+++.||+||+|+|+...
T Consensus 278 ~~~~~~~ad~vI~a~p~~~l 297 (489)
T 2jae_A 278 GSKKSITADYAICTIPPHLV 297 (489)
T ss_dssp TEEEEEEESEEEECSCHHHH
T ss_pred CeEEEEECCEEEECCCHHHH
Confidence 68999999999999854
No 27
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.79 E-value=3.8e-19 Score=176.10 Aligned_cols=227 Identities=16% Similarity=0.220 Sum_probs=150.8
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEe-eCCeEe-cccceeEecCChhHHHHHHH
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVT-ISGQTF-EAGASILHPKNYHTVNFTKL 95 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~-~~g~~~-d~G~~~~~~~~~~~~~~~~~ 95 (487)
....+||+|||||++||+||+.|++ +|++|+|+|+++++||++.+.. ..|..+ |.|+++++..+..+.+++++
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~-----~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~ 100 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLAS-----SGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSR 100 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHT
T ss_pred cCCCCCEEEECccHHHHHHHHHHHH-----CCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHH
Confidence 3456899999999999999999999 9999999999999999999887 678764 99999999888888899999
Q ss_pred cCCCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhc
Q 043512 96 LNLKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESF 175 (487)
Q Consensus 96 lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (487)
++...... .....+.+|+.+.+. ..+ ..+..+|...........++. . .
T Consensus 101 ~~~~~~~~-----~~~~~~~~g~l~~lP-----------~~~----~~~~~l~~~~~~~~~~~~~l~-------~--~-- 149 (397)
T 3hdq_A 101 FTEWRPYQ-----HRVLASVDGQLLPIP-----------INL----DTVNRLYGLNLTSFQVEEFFA-------S--V-- 149 (397)
T ss_dssp SCCEEECC-----CBEEEEETTEEEEES-----------CCH----HHHHHHHTCCCCHHHHHHHHH-------H--H--
T ss_pred hhhccccc-----ccceEEECCEEEEcC-----------CCh----HHHHHhhccCCCHHHHHHHHh-------h--c--
Confidence 88432111 112444566555542 110 001112221111111111111 0 0
Q ss_pred cCCCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchH-HHHHhhhc-C----CCC
Q 043512 176 ETRPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGL-AGAVSLAG-S----GGG 248 (487)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~-~----~~g 248 (487)
........++.+|+.+. +.+.+.+.++.+++...|+.+. ++|+. ..-+.... . ..+
T Consensus 150 ----------------~~~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~ 212 (397)
T 3hdq_A 150 ----------------AEKVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFAD 212 (397)
T ss_dssp ----------------CCCCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCC
T ss_pred ----------------ccCCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhh
Confidence 00112346777777643 3355667788888888888776 57753 22111111 0 113
Q ss_pred ce--EeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 249 LW--AVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 249 ~~--~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+ +|+||+.+++++|++..|++|++|++|+++ +..+.+|.||+|+|+..
T Consensus 213 ~~qg~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~-------------~~~~~~d~vI~T~P~d~ 263 (397)
T 3hdq_A 213 TYQAMPLHGYTRMFQNMLSSPNIKVMLNTDYREI-------------ADFIPFQHMIYTGPVDA 263 (397)
T ss_dssp SEEEEETTCHHHHHHHHTCSTTEEEEESCCGGGT-------------TTTSCEEEEEECSCHHH
T ss_pred hheeccCCCHHHHHHHHHhccCCEEEECCeEEec-------------cccccCCEEEEcCCHHH
Confidence 33 699999999999998889999999999732 44678999999999864
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.79 E-value=6.4e-19 Score=175.29 Aligned_cols=224 Identities=13% Similarity=0.174 Sum_probs=149.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEee--CCeEe-cccceeEecCChhHHHHHHHcC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTI--SGQTF-EAGASILHPKNYHTVNFTKLLN 97 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~--~g~~~-d~G~~~~~~~~~~~~~~~~~lg 97 (487)
.+||+|||||++|+++|+.|++ .|++|+|+|+++++||++++... .|+.+ |.|+++++..++.+.+++++++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~ 77 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHA 77 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHh
Confidence 4799999999999999999999 99999999999999999999988 78876 9999999988888888888887
Q ss_pred CCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccC
Q 043512 98 LKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFET 177 (487)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (487)
.... ... . ...+.+|+.+.+.. . ...+.. ++.....+....+++. ....
T Consensus 78 ~~~~--~~~-~--~~~~~~g~~~~~P~----~-------~~~~~~----l~~~~~~~~~~~~~l~-------~~~~---- 126 (384)
T 2bi7_A 78 EMMP--YVN-R--VKATVNGQVFSLPI----N-------LHTINQ----FFSKTCSPDEARALIA-------EKGD---- 126 (384)
T ss_dssp CEEE--CCC-C--EEEEETTEEEEESC----C-------HHHHHH----HTTCCCCHHHHHHHHH-------HHSC----
T ss_pred hhcc--ccc-c--eEEEECCEEEECCC----C-------hhHHHH----HhcccCCHHHHHHHHH-------Hhhh----
Confidence 5211 111 1 13345665444421 0 001100 0000000111111111 0000
Q ss_pred CCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHHH-Hhh---hc--CCCCce
Q 043512 178 RPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAGA-VSL---AG--SGGGLW 250 (487)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~---~~--~~~g~~ 250 (487)
. . .....++.+|+.+. +.+.+.+.++.++....|+.+. ++++.... +.. .. ...+.|
T Consensus 127 -~-------------~-~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~ 190 (384)
T 2bi7_A 127 -S-------------T-IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKF 190 (384)
T ss_dssp -C-------------S-CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSE
T ss_pred -c-------------c-CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccc
Confidence 0 0 12356788888765 5577777777778888888766 56654321 110 01 123455
Q ss_pred --EeecchHHHHHHHHHhcCCeEEeCCceE-EEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 251 --AVEGGNWQMAAGLINRSDVALHLHEEIE-SISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 251 --~~~gG~~~l~~~l~~~~G~~i~~~~~V~-~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+|+||+++++++|++..|++|+++++|+ +|.. .||+||+|+|+..+
T Consensus 191 ~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~---------------~~d~VI~a~p~~~~ 239 (384)
T 2bi7_A 191 QGMPKCGYTQMIKSILNHENIKVDLQREFIVEERT---------------HYDHVFYSGPLDAF 239 (384)
T ss_dssp EEEETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG---------------GSSEEEECSCHHHH
T ss_pred cEEECcCHHHHHHHHHhcCCCEEEECCeeehhhhc---------------cCCEEEEcCCHHHH
Confidence 8999999999999988889999999998 7742 39999999999864
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.78 E-value=2.4e-19 Score=177.34 Aligned_cols=225 Identities=16% Similarity=0.242 Sum_probs=146.5
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEec-ccceeEecCChhHHHHHHHcCCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFE-AGASILHPKNYHTVNFTKLLNLKP 100 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d-~G~~~~~~~~~~~~~~~~~lgl~~ 100 (487)
+||+|||||++||+||++|++ .|++|+|+|+++++||++.+....|+.+| .|+++++..+..+.+++++++...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~-----~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~ 76 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK-----LNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFN 76 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG-----GTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEESCHHHHHHHHTTSCBC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCCcEEEEecCCCCCcceEeeccCCceeeccCCceecCCCHHHHHHHHHhhhhh
Confidence 689999999999999999999 99999999999999999999998999995 999999988877778888777532
Q ss_pred CCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccCCCC
Q 043512 101 KDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFETRPV 180 (487)
Q Consensus 101 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (487)
.. .... ..+.+|+.+.+. .....+.. ++... .+....+++.+. ...
T Consensus 77 ~~--~~~~---~~~~~g~~~~~p-----------~~~~~~~~----l~~~~-~~~~~~~~l~~~-------~~~------ 122 (367)
T 1i8t_A 77 RF--TNSP---LAIYKDKLFNLP-----------FNMNTFHQ----MWGVK-DPQEAQNIINAQ-------KKK------ 122 (367)
T ss_dssp CC--CCCC---EEEETTEEEESS-----------BSHHHHHH----HHCCC-CHHHHHHHHHHH-------TTT------
T ss_pred hc--cccc---eEEECCeEEEcC-----------CCHHHHHH----HhccC-CHHHHHHHHHHH-------hhc------
Confidence 11 1111 344556444331 11111111 00000 111111121111 000
Q ss_pred CCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-CcchHHHH-Hhhh---c--CCCCce--E
Q 043512 181 FESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISGLAGA-VSLA---G--SGGGLW--A 251 (487)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~~---~--~~~g~~--~ 251 (487)
+ ......++.+|+.+. +.+.+.+.++.++....++.++ ++++.... +... . ...+.| +
T Consensus 123 ~------------~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~ 189 (367)
T 1i8t_A 123 Y------------GDKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGI 189 (367)
T ss_dssp T------------CCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEEC
T ss_pred c------------CCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcc
Confidence 0 001345677777665 4456666677777777777665 56654321 1111 1 113455 8
Q ss_pred eecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 252 VEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 252 ~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
|+||+++++++|++ |++|++|++|++|... | .+.||+||+|+|+...
T Consensus 190 p~gG~~~l~~~l~~--g~~i~l~~~V~~i~~~-----v------~~~~D~VV~a~p~~~~ 236 (367)
T 1i8t_A 190 PVGGYTKLIEKMLE--GVDVKLGIDFLKDKDS-----L------ASKAHRIIYTGPIDQY 236 (367)
T ss_dssp BTTCHHHHHHHHHT--TSEEECSCCGGGSHHH-----H------HTTEEEEEECSCHHHH
T ss_pred cCCCHHHHHHHHhc--CCEEEeCCceeeechh-----h------hccCCEEEEeccHHHH
Confidence 99999999999998 6899999999988521 1 2579999999999753
No 30
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.78 E-value=7.1e-19 Score=180.40 Aligned_cols=238 Identities=12% Similarity=0.108 Sum_probs=144.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCC-CeEEEEecCCCccceeEEE-eeCCeEecccceeEecCChhHHHHHHHcC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWH-PRILMFERNGVVGGRMATV-TISGQTFEAGASILHPKNYHTVNFTKLLN 97 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G-~~V~VlE~~~~~GGr~~s~-~~~g~~~d~G~~~~~~~~~~~~~~~~~lg 97 (487)
..+||+|||||++||+||++|++ +| .+|+|+|+++++||++++. ..+|+.+|.|++++...+..+.++++++.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~-----~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~ 82 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTE-----LGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV 82 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHH-----TTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC
T ss_pred cCCCEEEECcCHHHHHHHHHHHH-----cCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh
Confidence 46899999999999999999999 98 7999999999999999995 67899999999998877777778888864
Q ss_pred CCCCCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccC
Q 043512 98 LKPKDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFET 177 (487)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (487)
.. .... ....+.+.+|+.+.+.- ......++.. .....+...... ... ..
T Consensus 83 -~~--~~~~-~~~~~~~~~g~~~~~P~--~~~~~~l~~~-------------------~~~~~~~~ll~~----~~~-~~ 132 (484)
T 4dsg_A 83 -QG--WNVL-QRESWVWVRGRWVPYPF--QNNIHRLPEQ-------------------DRKRCLDELVRS----HAR-TY 132 (484)
T ss_dssp -SC--EEEE-ECCCEEEETTEEEESSG--GGCGGGSCHH-------------------HHHHHHHHHHHH----HHC-CC
T ss_pred -hh--hhhc-cCceEEEECCEEEEeCc--cchhhhCCHH-------------------HHHHHHHHHHHH----Hhc-cC
Confidence 21 1100 01113445554433310 0000000000 000000000000 000 00
Q ss_pred CCCCCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCC-Ccch-----------HHHHHh----
Q 043512 178 RPVFESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSL-SISG-----------LAGAVS---- 241 (487)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~-----------~~~~~~---- 241 (487)
.....++.+|+.+. +...+.+.++.+++...|+.+. ++++ +..++.
T Consensus 133 -----------------~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~ 194 (484)
T 4dsg_A 133 -----------------TEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQE 194 (484)
T ss_dssp -----------------SSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHH
T ss_pred -----------------CCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhh
Confidence 01234555555443 2233333344455555565444 3333 111111
Q ss_pred hhc-C---CCC-ceEe-ecchHHHHHHHHHhcCC-eEEeC--CceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCCC
Q 043512 242 LAG-S---GGG-LWAV-EGGNWQMAAGLINRSDV-ALHLH--EEIESISYLREYYELNSTKGNSYTCQITVVATPLDELN 312 (487)
Q Consensus 242 ~~~-~---~~g-~~~~-~gG~~~l~~~l~~~~G~-~i~~~--~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~~ 312 (487)
... . ..+ .++| .||+++++++|++.++. +|+++ ++|++|..+++++ ++.+|+++.||+||+|+|++...
T Consensus 195 ~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~ 272 (484)
T 4dsg_A 195 NRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLL 272 (484)
T ss_dssp TCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHH
T ss_pred cccccCCCccceEEeecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHH
Confidence 100 0 122 2344 58999999999998864 89999 5699999887765 45788889999999999998754
No 31
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.77 E-value=7.9e-19 Score=172.27 Aligned_cols=63 Identities=13% Similarity=0.287 Sum_probs=57.4
Q ss_pred ceEeecchHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 249 LWAVEGGNWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 249 ~~~~~gG~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
.|.+.+|+..++++|++.+|++|+++++|++|..+++++.|++.+|+++.||.||+|+|+...
T Consensus 104 ~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~ 166 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEI 166 (342)
T ss_dssp EEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHH
T ss_pred ceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 567788999999999998899999999999999988889999988977999999999998754
No 32
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.77 E-value=3.2e-18 Score=179.70 Aligned_cols=74 Identities=18% Similarity=0.274 Sum_probs=67.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCC--------CeEEEEecCC-Cc----------------cceeEEEee-----
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWH--------PRILMFERNG-VV----------------GGRMATVTI----- 70 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G--------~~V~VlE~~~-~~----------------GGr~~s~~~----- 70 (487)
.++|+|||||++||+||+.|++ .| ++|+|||+++ ++ |||+.+...
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~-----~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~ 130 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGR-----LAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDP 130 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----HHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCG
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcc
Confidence 4689999999999999999999 78 9999999999 99 999999877
Q ss_pred --CCeEecccceeEecCChhHHHHHHHc-CCC
Q 043512 71 --SGQTFEAGASILHPKNYHTVNFTKLL-NLK 99 (487)
Q Consensus 71 --~g~~~d~G~~~~~~~~~~~~~~~~~l-gl~ 99 (487)
++..+|+|++++...+..+.++++++ |+.
T Consensus 131 ~~~~~~~e~G~~~~~~~~~~~~~~~~~l~gl~ 162 (721)
T 3ayj_A 131 ASGDTIYEVGAMRFPEIAGLTWHYASAAFGDA 162 (721)
T ss_dssp GGCSEEEECSCCCEETTCHHHHHHHHHHHCTT
T ss_pred cCCCcEEecCCEEecCccHHHHHHHHHhcCCc
Confidence 45889999999998887788999999 986
No 33
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.75 E-value=4.6e-17 Score=159.07 Aligned_cols=161 Identities=17% Similarity=0.274 Sum_probs=116.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhHHHHHHHcCCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHTVNFTKLLNLKP 100 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~~~~~~~lgl~~ 100 (487)
++||+|||||++|+++|+.|++ .|.+|+|+||++.+||++.+....+..+|.|..++......+.++++.+....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~-----~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA-----AGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQG 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHH-----CCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCC
Confidence 4799999999999999999999 99999999999999999999999999999999888766654444544432110
Q ss_pred CCCCCCCCCceEEEEcCCeeEEEeccCCCCcchhhhhHHHHHHHHHHHHhcCChHHHhHHHHHHHHHHHHhhhhccCCCC
Q 043512 101 KDPPSSEDSTAFGIWDGSKFVFKTISVSSTVPFVQKIVSLANSVLMVLRYGLSLLRMESFTESAVDKFLKYYESFETRPV 180 (487)
Q Consensus 101 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (487)
. ...+.+. +.... .+ .
T Consensus 77 ~----------~~~~~~~-~~~~~--~~--------------------------------------------------~- 92 (336)
T 1yvv_A 77 H----------VAEWTPL-LYNFH--AG--------------------------------------------------R- 92 (336)
T ss_dssp S----------EEEECCC-EEEES--SS--------------------------------------------------B-
T ss_pred C----------eeecccc-ceecc--Cc--------------------------------------------------c-
Confidence 0 0111111 11000 00 0
Q ss_pred CCCHHHHHHHcCChhhhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhhcCCCCceEeecchHHHH
Q 043512 181 FESVDEMLKWAGLFNLTARSLEEELIDARLSPLLMQELVTIITRINYGQSLSISGLAGAVSLAGSGGGLWAVEGGNWQMA 260 (487)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~ 260 (487)
+.. .......|....|+..+.
T Consensus 93 ~~~-----------------------------------------------------------~~~~~~~~~~~~~~~~l~ 113 (336)
T 1yvv_A 93 LSP-----------------------------------------------------------SPDEQVRWVGKPGMSAIT 113 (336)
T ss_dssp CCC-----------------------------------------------------------CCTTSCEEEESSCTHHHH
T ss_pred ccc-----------------------------------------------------------CCCCCccEEcCccHHHHH
Confidence 000 000012345566889999
Q ss_pred HHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEe-cCEEEEccCCCCC
Q 043512 261 AGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYT-CQITVVATPLDEL 311 (487)
Q Consensus 261 ~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~-ad~VV~a~~~~~~ 311 (487)
+++++ |++|+++++|++|..+++++.|++.+|+... ||.||+|+|....
T Consensus 114 ~~l~~--g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~ 163 (336)
T 1yvv_A 114 RAMRG--DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQA 163 (336)
T ss_dssp HHHHT--TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHH
T ss_pred HHHHc--cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHH
Confidence 88877 7899999999999999889999999997664 9999999998754
No 34
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.60 E-value=1.6e-14 Score=149.85 Aligned_cols=109 Identities=9% Similarity=0.071 Sum_probs=75.3
Q ss_pred hhcccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCCCcchHHHH---Hhhh----cCC-CCceEeecchHHHHHHHHH--
Q 043512 196 LTARSLEEELIDARLSPLLMQELVTIITRINYGQSLSISGLAGA---VSLA----GSG-GGLWAVEGGNWQMAAGLIN-- 265 (487)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~----~~~-~g~~~~~gG~~~l~~~l~~-- 265 (487)
+...++.+|+++.++++.+...+.. .+ ..++.. ..++..++ ..+. .+. .+.+++.||+++|+++|++
T Consensus 312 ~d~~S~~d~L~~~~ls~~L~~~L~~-~l-al~~~~-~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g~L~qaL~r~~ 388 (650)
T 1vg0_A 312 YEGTTFSEYLKTQKLTPNLQYFVLH-SI-AMTSET-TSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMC 388 (650)
T ss_dssp TTTSBHHHHHTTSSSCHHHHHHHHH-HT-TC--CC-SCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTTHHHHHHHHHH
T ss_pred hccCCHHHHHHHhCCCHHHHHHHHH-HH-hccCCC-CCchhHHHHHHHHHHHHHHhhccCceEEeCCchhHHHHHHHHHH
Confidence 4578999999999888876644332 22 112111 12333321 2221 122 3677999999999999965
Q ss_pred -hcCCeEEeCCceEEEEEeC--CEE-EEEEccCceEecCEEEEccC
Q 043512 266 -RSDVALHLHEEIESISYLR--EYY-ELNSTKGNSYTCQITVVATP 307 (487)
Q Consensus 266 -~~G~~i~~~~~V~~I~~~~--~~v-~V~~~~G~~~~ad~VV~a~~ 307 (487)
..|++|+++++|++|..++ +++ +|++.+|+++.||+||++..
T Consensus 389 ~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 389 AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp HHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 5699999999999999887 655 67777899999999999544
No 35
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.38 E-value=6.5e-13 Score=125.12 Aligned_cols=65 Identities=25% Similarity=0.429 Sum_probs=59.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeEEEeeCCeEecccceeEecCChhH
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMATVTISGQTFEAGASILHPKNYHT 89 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~s~~~~g~~~d~G~~~~~~~~~~~ 89 (487)
|+.||+|||||++||+||+.|++ +|++|+||||++.+||++++.+..+..+|.|+.++......+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~-----~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~~~~~~~ 65 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTA-----AGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRF 65 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCCCEEEEECCCCCCCcccccccCCceeecCccccccCcHHH
Confidence 46899999999999999999999 999999999999999999999999999999999887766543
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.36 E-value=5.2e-12 Score=134.91 Aligned_cols=64 Identities=14% Similarity=0.227 Sum_probs=51.7
Q ss_pred CceEeecc---hHHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 248 GLWAVEGG---NWQMAAGLIN---RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 248 g~~~~~gG---~~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+.+++.+| ...++++|.+ +.|++|+++++|++|..+++++.|++.+|.++.||.||+|++.+..
T Consensus 405 g~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 405 GITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred cEEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 34455444 2566666654 4699999999999999999999999988888999999999999854
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.35 E-value=1.1e-12 Score=130.00 Aligned_cols=63 Identities=17% Similarity=0.191 Sum_probs=50.2
Q ss_pred CceEeecc---hHHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 248 GLWAVEGG---NWQMAAGLIN---RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 248 g~~~~~gG---~~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+.+.+.+| ...++++|++ +.|++|+++++|++|..+++++.|++.+| ++.||+||+|++.+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 142 ATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHH
T ss_pred EEEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHH
Confidence 34444444 2556666654 45999999999999999998899999888 8999999999999863
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.33 E-value=7.8e-12 Score=133.71 Aligned_cols=64 Identities=14% Similarity=0.244 Sum_probs=51.0
Q ss_pred CceEeecch---HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEccCc-eEecCEEEEccCCCCC
Q 043512 248 GLWAVEGGN---WQMAAGLIN---RSDVALHLHEEIESISYLREYYELNSTKGN-SYTCQITVVATPLDEL 311 (487)
Q Consensus 248 g~~~~~gG~---~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VV~a~~~~~~ 311 (487)
+.+++.+|. ..++++|.+ +.|++|+++++|++|..+++++.|++.+|+ ++.||.||+|++.+..
T Consensus 400 g~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 400 GIHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred eEEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 455555543 566776655 469999999999999998888999998887 8999999999999854
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.31 E-value=9e-12 Score=122.77 Aligned_cols=56 Identities=14% Similarity=0.191 Sum_probs=45.7
Q ss_pred hHHHHHHHHH---hcCCeEEeCCceEEEEEeCCE-EEEEEccC--ceEecCEEEEccCCCCC
Q 043512 256 NWQMAAGLIN---RSDVALHLHEEIESISYLREY-YELNSTKG--NSYTCQITVVATPLDEL 311 (487)
Q Consensus 256 ~~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G--~~~~ad~VV~a~~~~~~ 311 (487)
...+.+.|++ +.|++|+++++|++|..++++ +.|++.+| .++.||.||+|++.+..
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchH
Confidence 3456666654 469999999999999998765 78888888 48999999999999853
No 40
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.31 E-value=1.8e-11 Score=123.91 Aligned_cols=56 Identities=7% Similarity=0.071 Sum_probs=47.2
Q ss_pred hHHHHHHHHH---hcCCeEEeCC---ceEEEEEeCCEEE-EEEccCceEecCEEEEccCCCCC
Q 043512 256 NWQMAAGLIN---RSDVALHLHE---EIESISYLREYYE-LNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 256 ~~~l~~~l~~---~~G~~i~~~~---~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
...+.++|.+ +.|++|++++ +|++|..+++++. |++.+|+++.||.||+|++.+..
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 3456666654 4699999999 9999999888885 99999988999999999999864
No 41
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.30 E-value=4e-11 Score=120.05 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=50.5
Q ss_pred CceEeecchHHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 248 GLWAVEGGNWQMAAGLIN---RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 248 g~~~~~gG~~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
|..++......+.+.|.+ +.|++|+++++|++|..+++++.|++.+| ++.||.||+|++.+.
T Consensus 123 g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 123 GQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp TEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred CEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 444455555667666655 45999999999999999988999999888 899999999999875
No 42
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.22 E-value=1.2e-09 Score=108.45 Aligned_cols=38 Identities=29% Similarity=0.566 Sum_probs=35.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGG 63 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GG 63 (487)
++||+|||||++||+||+.|++ +|++|+|+||++.+|.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~-----~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCCcEEEEeCCCCCCC
Confidence 4899999999999999999999 9999999999887764
No 43
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.22 E-value=2.1e-11 Score=123.65 Aligned_cols=55 Identities=15% Similarity=0.171 Sum_probs=45.7
Q ss_pred hHHHHHHHHH---hcCCeEEeCCceEEEEEeCCE-EEEEEccCceEecCEEEEccCCCC
Q 043512 256 NWQMAAGLIN---RSDVALHLHEEIESISYLREY-YELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 256 ~~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
...+.+.|.+ +.|++|+++++|++|..++++ ++|++.+|++++||.||+|++.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 3556666644 469999999999999988887 689998887799999999999876
No 44
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.21 E-value=8.8e-11 Score=117.63 Aligned_cols=44 Identities=9% Similarity=0.015 Sum_probs=40.6
Q ss_pred CeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCCC
Q 043512 269 VALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDELN 312 (487)
Q Consensus 269 ~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~~ 312 (487)
++|+++++|++|..+++++.|++.+|+++.||.||.|.+.+...
T Consensus 140 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSAL 183 (407)
T ss_dssp GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSS
T ss_pred CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHH
Confidence 78999999999999999999999999999999999999998643
No 45
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.19 E-value=2.6e-10 Score=113.79 Aligned_cols=44 Identities=11% Similarity=0.053 Sum_probs=40.6
Q ss_pred CCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 268 DVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 268 G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
|++|+++++|++|..+++++.|++.+|++++||.||.|.+.+..
T Consensus 111 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 111 PERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp STTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 78999999999999988889999999989999999999998864
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.16 E-value=1.6e-10 Score=118.95 Aligned_cols=53 Identities=8% Similarity=0.102 Sum_probs=43.8
Q ss_pred HHHHHHH---HhcCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCC
Q 043512 258 QMAAGLI---NRSDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~---~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+.+.|. ++.|++|+++++|++|..+++++ +|++.+|+++.||.||+|++.+.
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 3444443 34699999999999999887765 68899998999999999999876
No 47
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.16 E-value=1.2e-10 Score=114.97 Aligned_cols=54 Identities=11% Similarity=0.071 Sum_probs=44.6
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
..+.+.|.+ +.|++|+++++|++|..+++++.|++.+| ++.||.||+|++.+..
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 455555544 46999999999999998887888888888 6999999999998864
No 48
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.13 E-value=1.3e-10 Score=115.97 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=43.5
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
..+.+.|.+ +.|++|+++++|++|..+++++.|++.+| +++||.||+|++.+.
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcCh
Confidence 344555543 46999999999999999888888888776 899999999999874
No 49
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.13 E-value=4.8e-10 Score=115.57 Aligned_cols=41 Identities=27% Similarity=0.366 Sum_probs=38.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
..+||||||||++||+||+.|++ +|.+|+|+||.+.+||.+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~-----~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAAR-----AGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-----CCCcEEEEeCCCCCCCcc
Confidence 45799999999999999999999 999999999999888865
No 50
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.13 E-value=4.5e-10 Score=115.31 Aligned_cols=50 Identities=6% Similarity=-0.103 Sum_probs=42.4
Q ss_pred HHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCc---eEecCEEEEccCCCCC
Q 043512 262 GLINRSDVALHLHEEIESISYLREYYELNSTKGN---SYTCQITVVATPLDEL 311 (487)
Q Consensus 262 ~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VV~a~~~~~~ 311 (487)
..+++.|++|+++++|++|+.+++++.|++.+|. +++||.||.|.+.+..
T Consensus 114 ~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 114 QWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp HHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred HHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 3344569999999999999999999888887764 7999999999999863
No 51
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.12 E-value=8.7e-11 Score=116.54 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=44.1
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEE-EEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYYE-LNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
..+.+.|.+ +.|++|+++++|++|..+++++. |++.+| ++.||.||+|++.+.
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 455555544 46999999999999998888875 888888 899999999999985
No 52
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.12 E-value=2.6e-10 Score=113.31 Aligned_cols=53 Identities=13% Similarity=0.169 Sum_probs=44.1
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
..+.+.|.+ +.|++|+++++|++|..+++++.|++.+| ++.||.||+|++.+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 455555544 45999999999999999888888888777 799999999999875
No 53
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.12 E-value=5.2e-10 Score=114.86 Aligned_cols=50 Identities=8% Similarity=-0.053 Sum_probs=42.3
Q ss_pred HHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCc---eEecCEEEEccCCCCC
Q 043512 262 GLINRSDVALHLHEEIESISYLREYYELNSTKGN---SYTCQITVVATPLDEL 311 (487)
Q Consensus 262 ~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VV~a~~~~~~ 311 (487)
..+++.|++|+++++|++|..+++++.|++.+|+ +++||.||.|.+.+..
T Consensus 115 ~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 115 EWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp HHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred HHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 3344569999999999999998888888887774 7999999999999863
No 54
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.12 E-value=5.1e-10 Score=111.42 Aligned_cols=47 Identities=2% Similarity=0.007 Sum_probs=39.5
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEEE-EEE---ccCceEecCEEEEccCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYYE-LNS---TKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v~-V~~---~~G~~~~ad~VV~a~~~~~ 310 (487)
+++.|++|+++++|++|..+++++. |++ .++.+++||.||.|.+.+.
T Consensus 112 ~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 112 AAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 3346999999999999999988874 776 3556899999999999886
No 55
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.11 E-value=6.2e-10 Score=111.09 Aligned_cols=53 Identities=13% Similarity=0.087 Sum_probs=43.2
Q ss_pred HHHHHHHhc-CCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 259 MAAGLINRS-DVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 259 l~~~l~~~~-G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+.+.|.+.+ +++|+++++|++|..+++++.|++.+|++++||.||.|.+.+..
T Consensus 130 l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 130 LRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp HHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred HHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 334444433 46899999999999888888999999988999999999999864
No 56
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.11 E-value=3e-10 Score=112.62 Aligned_cols=54 Identities=11% Similarity=0.075 Sum_probs=44.5
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
..+.+.|.+ +.|++|+++++|++|..+++++.|++.+| ++.||.||+|++.+..
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHH
Confidence 455555544 45999999999999998888888888877 8999999999999753
No 57
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.10 E-value=9.1e-10 Score=109.73 Aligned_cols=54 Identities=17% Similarity=0.236 Sum_probs=43.4
Q ss_pred hHHHHHHHHH---hcCCeEEeCCceEEEEEe----CCEEEEEEccCceEecCEEEEccCCCC
Q 043512 256 NWQMAAGLIN---RSDVALHLHEEIESISYL----REYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 256 ~~~l~~~l~~---~~G~~i~~~~~V~~I~~~----~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
...+.+.|.+ +.|++|+++++|++|..+ ++++.|++.+| +++||.||+|++...
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 3455555543 469999999999999977 56688888777 899999999998875
No 58
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.10 E-value=1.6e-10 Score=119.86 Aligned_cols=49 Identities=16% Similarity=0.299 Sum_probs=40.9
Q ss_pred HHHHHHhcCC--eEEeCCceEEEEEeCC--EEEEEEccCceEecCEEEEccCC
Q 043512 260 AAGLINRSDV--ALHLHEEIESISYLRE--YYELNSTKGNSYTCQITVVATPL 308 (487)
Q Consensus 260 ~~~l~~~~G~--~i~~~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VV~a~~~ 308 (487)
.+..+++.|+ +++++++|+++..+++ .+.|++.+|+++.||.||+|++.
T Consensus 105 l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 105 LEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 3445556665 7999999999998765 78999999988999999999995
No 59
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.08 E-value=3.8e-10 Score=116.79 Aligned_cols=51 Identities=24% Similarity=0.433 Sum_probs=42.4
Q ss_pred HHHHHHHhcCC--eEEeCCceEEEEEeCC--EEEEEEccCceEecCEEEEccCCC
Q 043512 259 MAAGLINRSDV--ALHLHEEIESISYLRE--YYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 259 l~~~l~~~~G~--~i~~~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
..+..+++.|+ +|+++++|+++..+++ .+.|++.+|+++.||.||+|++..
T Consensus 92 ~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 92 YLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 34445556676 8999999999998865 789999999889999999999964
No 60
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.07 E-value=1.6e-10 Score=115.52 Aligned_cols=52 Identities=13% Similarity=0.095 Sum_probs=42.8
Q ss_pred HHHHHHHH---hcCCeEEeCCceEEEEEeCCE-EEEEEccCceEecCEEEEccCCCC
Q 043512 258 QMAAGLIN---RSDVALHLHEEIESISYLREY-YELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+.+.|.+ +.|++|+++++|++|..++++ ++|++.+| ++.||.||+|++.+.
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 55555544 469999999999999987766 47888888 799999999999875
No 61
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.05 E-value=3.4e-09 Score=110.75 Aligned_cols=40 Identities=28% Similarity=0.449 Sum_probs=37.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
.+||+|||||++||+||+.|++ .|.+|+|+||.+.+||..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~-----~G~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATD-----SGAKVILIEKEPVIGGNA 165 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCTTG
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCCcEEEEeCCCCCCCch
Confidence 5799999999999999999999 999999999999888754
No 62
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.05 E-value=3.3e-10 Score=123.76 Aligned_cols=54 Identities=13% Similarity=0.081 Sum_probs=45.0
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
..+.++|++ +.|++|+++++|++|..+++++ +|++.+| ++.||.||+|++.+..
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGA 208 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchH
Confidence 456666654 4599999999999999988876 7888888 8999999999999863
No 63
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.04 E-value=2.8e-09 Score=111.25 Aligned_cols=41 Identities=15% Similarity=0.370 Sum_probs=37.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
..+||+|||||++||+||+.|++ .|.+|+|+||.+.+||..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~-----~G~~V~vlEk~~~~gg~s 160 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKK-----AGANVILVDKAPFSGGNS 160 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----HTCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-----CCCcEEEEeCCCCCCCcc
Confidence 45799999999999999999999 999999999999887754
No 64
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.02 E-value=2.1e-09 Score=106.49 Aligned_cols=45 Identities=13% Similarity=0.116 Sum_probs=38.1
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+++.|++|+++++|++|.. ++ .|++.+|++++||.||.|.+.+..
T Consensus 117 ~~~~gv~i~~~~~v~~i~~-~~--~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 117 ARALGVDISVNSEAVAADP-VG--RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHTTCEEESSCCEEEEET-TT--EEEETTSCEEECSEEEECCCTTCH
T ss_pred HHhcCCEEEeCCEEEEEEe-CC--EEEECCCCEEEcCEEEECCCccHH
Confidence 3346999999999999987 44 788888989999999999998864
No 65
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.02 E-value=6.5e-10 Score=115.47 Aligned_cols=43 Identities=28% Similarity=0.385 Sum_probs=38.6
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
.+..+||+|||||++|+++|+.|++ .|++|+|+|+++.+||.+
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~-----~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRE-----LGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCTHH
T ss_pred CCCCCCEEEECccHHHHHHHHHHHh-----CCCCEEEEeCCCCCCCcc
Confidence 3446799999999999999999999 999999999999888753
No 66
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.01 E-value=5.2e-10 Score=111.64 Aligned_cols=46 Identities=13% Similarity=0.164 Sum_probs=41.2
Q ss_pred hc-CCeEEeCCceEEEEEeCCEE--EEEEccCceEecCEEEEccCCCCC
Q 043512 266 RS-DVALHLHEEIESISYLREYY--ELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 266 ~~-G~~i~~~~~V~~I~~~~~~v--~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+. |++|+++++|++|..+++++ .|++.+|++++||.||.|.+.+..
T Consensus 119 ~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 119 GEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp TCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred hcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 44 88999999999999988888 899989989999999999999864
No 67
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.98 E-value=7.2e-10 Score=112.42 Aligned_cols=54 Identities=9% Similarity=0.001 Sum_probs=43.4
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEE---------------eCCEE-EEEEccCceE--ecCEEEEccCCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISY---------------LREYY-ELNSTKGNSY--TCQITVVATPLDEL 311 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~---------------~~~~v-~V~~~~G~~~--~ad~VV~a~~~~~~ 311 (487)
..+.+.|.+ +.|++|+++++|++|.. +++++ +|++.+| ++ .||.||+|++.+..
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 456666654 45999999999999998 56665 7888888 78 99999999999853
No 68
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.98 E-value=2.5e-09 Score=106.85 Aligned_cols=54 Identities=7% Similarity=0.016 Sum_probs=44.6
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeC-CEEEEEEccCceEecCEEEEccCCCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLR-EYYELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~-~~v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
.+-+.|.+.++.+|+++++|++++..+ +++.|++.||++++||.||-|-+.+..
T Consensus 113 ~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 113 ELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp HHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcc
Confidence 344556666778899999999998754 468999999999999999999998864
No 69
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.98 E-value=8.3e-10 Score=114.35 Aligned_cols=40 Identities=28% Similarity=0.404 Sum_probs=37.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccce
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGR 64 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr 64 (487)
..+||+|||||++|+++|..|++ .|++|+|+|+++.+||.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~~v~iiE~~~~~GGt 47 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGMKVLGIEAGEDVGGT 47 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSCTH
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCCCEEEEeCCCCCCCc
Confidence 45799999999999999999999 99999999999988875
No 70
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.96 E-value=3.2e-09 Score=106.61 Aligned_cols=47 Identities=13% Similarity=0.252 Sum_probs=39.5
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEE--EEEEccCc--eEecCEEEEccCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYY--ELNSTKGN--SYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v--~V~~~~G~--~~~ad~VV~a~~~~~ 310 (487)
+++.|++|+++++|++|..+++++ .|++.+|+ +++||.||.|++.+.
T Consensus 116 a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 116 AARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 344599999999999999987764 66778887 699999999999875
No 71
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.96 E-value=1.6e-09 Score=105.92 Aligned_cols=49 Identities=10% Similarity=0.062 Sum_probs=42.3
Q ss_pred HHHHHhcCCeEEeCCceEEEEEeCCEEE-EEEccCceEecCEEEEccCCCC
Q 043512 261 AGLINRSDVALHLHEEIESISYLREYYE-LNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 261 ~~l~~~~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
...++..|++++++++|++|..+++++. |++.+| ++.||+||+|++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 3455667999999999999999999988 998888 899999999999753
No 72
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.95 E-value=3.3e-09 Score=110.36 Aligned_cols=55 Identities=9% Similarity=-0.028 Sum_probs=44.0
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEE-EEEEcc---C--ceEecCEEEEccCCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYY-ELNSTK---G--NSYTCQITVVATPLDEL 311 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v-~V~~~~---G--~~~~ad~VV~a~~~~~~ 311 (487)
..+...|++ +.|++|+.+++|++|..+++++ +|++.+ | .++.||.||+|++++..
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~ 233 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVD 233 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchH
Confidence 456666654 4699999999999999998875 677654 3 47899999999999864
No 73
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.95 E-value=1e-09 Score=109.35 Aligned_cols=46 Identities=9% Similarity=0.096 Sum_probs=38.1
Q ss_pred hcCCeEEeCCceEEEEEeC-CEEEEEE-ccCc--eEecCEEEEccCCCCC
Q 043512 266 RSDVALHLHEEIESISYLR-EYYELNS-TKGN--SYTCQITVVATPLDEL 311 (487)
Q Consensus 266 ~~G~~i~~~~~V~~I~~~~-~~v~V~~-~~G~--~~~ad~VV~a~~~~~~ 311 (487)
+.|++|+++++|++|..++ +++.|++ .+|+ +++||.||.|.+.+..
T Consensus 115 ~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred hcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 3589999999999998764 4567776 6886 6999999999999864
No 74
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.94 E-value=3.8e-09 Score=100.24 Aligned_cols=38 Identities=26% Similarity=0.422 Sum_probs=35.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC-CCeEEEEecCCCccc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW-HPRILMFERNGVVGG 63 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~-G~~V~VlE~~~~~GG 63 (487)
.+||+|||||++|+++|+.|++ . |.+|+|+|+++.+||
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~-----~~G~~V~viEk~~~~gg 77 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISK-----NPNVQVAIIEQSVSPGG 77 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----STTSCEEEEESSSSCCT
T ss_pred ccCEEEECccHHHHHHHHHHHH-----cCCCeEEEEECCCCCCC
Confidence 4699999999999999999999 8 999999999988876
No 75
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.93 E-value=2.8e-09 Score=110.64 Aligned_cols=47 Identities=9% Similarity=-0.060 Sum_probs=41.0
Q ss_pred HHhcCCeEEeCCceEEEEEeCC----EEEEEEccC---ceEecCEEEEccCCCC
Q 043512 264 INRSDVALHLHEEIESISYLRE----YYELNSTKG---NSYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~----~v~V~~~~G---~~~~ad~VV~a~~~~~ 310 (487)
+++.|++|+++++|++|..+++ ++.|++.++ .+++||.||.|.+.+.
T Consensus 130 a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 130 ARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 3456999999999999999988 888887776 6899999999999986
No 76
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.92 E-value=3.8e-09 Score=107.07 Aligned_cols=51 Identities=8% Similarity=-0.024 Sum_probs=41.2
Q ss_pred HHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEcc---Cc---eEecCEEEEccCCCC
Q 043512 260 AAGLINRSDVALHLHEEIESISYLREYYELNSTK---GN---SYTCQITVVATPLDE 310 (487)
Q Consensus 260 ~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~---G~---~~~ad~VV~a~~~~~ 310 (487)
.+..++..+..|+++++|++|..+++++.|++.+ |+ ++.||.||+|++.+.
T Consensus 121 l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 121 QRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 3444455567899999999999988888888766 76 799999999999854
No 77
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.89 E-value=4.7e-09 Score=105.08 Aligned_cols=37 Identities=30% Similarity=0.363 Sum_probs=34.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCe-EEEEecCCCcc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPR-ILMFERNGVVG 62 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~-V~VlE~~~~~G 62 (487)
.+||+|||||++||++|..|++ .|.+ |+|+||++.++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCCeEEEEECCCCcc
Confidence 4799999999999999999999 9999 99999987764
No 78
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.88 E-value=1.4e-09 Score=113.26 Aligned_cols=47 Identities=11% Similarity=0.051 Sum_probs=40.6
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEEEEEE--ccC-ceEecCEEEEccCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYYELNS--TKG-NSYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v~V~~--~~G-~~~~ad~VV~a~~~~~ 310 (487)
+++.|++|+++++|++|+.+++++.|++ .+| ++++||.||.|.+.+.
T Consensus 158 a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 158 AREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 3446999999999999998888887776 677 6899999999999986
No 79
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.87 E-value=3.8e-09 Score=103.75 Aligned_cols=45 Identities=22% Similarity=0.420 Sum_probs=38.8
Q ss_pred HhcCCeEEeCCceEEEEEeCC-EEEEEEccCceEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISYLRE-YYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
+..|++++++++|++|..+++ .+.|++.+|+++.+|.||+|++..
T Consensus 85 ~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 85 ERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 345789999999999998765 678888888889999999999984
No 80
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.86 E-value=5.2e-09 Score=101.64 Aligned_cols=45 Identities=18% Similarity=0.393 Sum_probs=39.3
Q ss_pred HhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
+..+++++++++|++|..+++.+.|.+.+|+++.+|.||+|++..
T Consensus 76 ~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 76 APFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp GGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred HHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 345788999999999998887888888888889999999999974
No 81
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.86 E-value=2.5e-09 Score=110.35 Aligned_cols=48 Identities=17% Similarity=0.138 Sum_probs=38.8
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEE---EEEEccCc--eEecCEEEEccCCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYY---ELNSTKGN--SYTCQITVVATPLDEL 311 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v---~V~~~~G~--~~~ad~VV~a~~~~~~ 311 (487)
+++.|++|+++++|++|..+++++ .+.+.+|+ +++||.||.|.+.+..
T Consensus 121 a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 121 SERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 345799999999999999988864 34445674 7999999999999864
No 82
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.85 E-value=4.1e-09 Score=109.99 Aligned_cols=47 Identities=9% Similarity=0.114 Sum_probs=38.8
Q ss_pred HHhcCCeEEeCCceEEEEEe-CCEEEEEEc-cC--ceEecCEEEEccCCCC
Q 043512 264 INRSDVALHLHEEIESISYL-REYYELNST-KG--NSYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~-~~~v~V~~~-~G--~~~~ad~VV~a~~~~~ 310 (487)
+++.|++|+.+++|++|..+ ++.++|++. +| .+++||.||.|.+.+.
T Consensus 138 a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 138 ARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 44579999999999999976 455778776 66 5799999999999875
No 83
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.84 E-value=4.4e-08 Score=100.19 Aligned_cols=52 Identities=12% Similarity=0.194 Sum_probs=43.8
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
......+++.|++|+++++|++|..+++++.|++.+|+++.+|.||+|++..
T Consensus 236 ~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 236 QLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC
Confidence 3334445567999999999999998888888999999899999999999975
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.84 E-value=1.7e-08 Score=102.66 Aligned_cols=52 Identities=13% Similarity=0.023 Sum_probs=40.6
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEe---CCE--EEEEEccCc----eEecCEEEEccCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYL---REY--YELNSTKGN----SYTCQITVVATPL 308 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~---~~~--v~V~~~~G~----~~~ad~VV~a~~~ 308 (487)
....+..++..|++|+++++|++|..+ ++. +.|++.+|+ ++.||.||+|++.
T Consensus 130 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 130 NDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 344455566678899999999999986 443 377777775 8999999999996
No 85
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.84 E-value=1.9e-09 Score=104.39 Aligned_cols=44 Identities=11% Similarity=0.239 Sum_probs=38.0
Q ss_pred HhcCCeEEeCCceEEEEEeCC-EEEEEEccCceEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISYLRE-YYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
++.|++++++++|++|..+++ .+.|.+.+|+ +.+|.||+|++..
T Consensus 78 ~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 78 AKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp TTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred HHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 345889999999999998876 6888888885 9999999999983
No 86
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.84 E-value=1.8e-08 Score=96.81 Aligned_cols=39 Identities=33% Similarity=0.446 Sum_probs=35.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC--CCeEEEEecCCCccce
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW--HPRILMFERNGVVGGR 64 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~--G~~V~VlE~~~~~GGr 64 (487)
.+||+|||||++||++|+.|++ . |++|+|+|+++.+||.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~-----~~~G~~V~LiEk~~~~GGg 119 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLST-----LRPDLRITIVEAGVAPGGG 119 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----HCTTSCEEEEESSSSCCTT
T ss_pred cCCEEEECccHHHHHHHHHHHh-----cCCCCEEEEEeCCCccCCc
Confidence 5799999999999999999999 6 9999999999887763
No 87
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.83 E-value=1.2e-08 Score=98.36 Aligned_cols=44 Identities=9% Similarity=0.292 Sum_probs=37.0
Q ss_pred HhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
++.|+++++ ++|++|..+++.+.|.+.+|+++.+|.||+|++..
T Consensus 81 ~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 81 EKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred HHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 455788888 99999998888888999888899999999999976
No 88
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.82 E-value=1.8e-08 Score=103.32 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=37.0
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccc
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGG 63 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GG 63 (487)
....+||+|||||++||++|..|++ .|++|+|+|+++.+|+
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~-----~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELAL-----LGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCSSCCC
T ss_pred ccCCCCEEEECccHHHHHHHHHHHH-----CCCeEEEEEeccccCC
Confidence 3456899999999999999999999 9999999999987764
No 89
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.81 E-value=1.1e-08 Score=100.69 Aligned_cols=50 Identities=20% Similarity=0.248 Sum_probs=41.8
Q ss_pred HHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 260 AAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 260 ~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
...+++..|++++++++|++|..+++++.|.+.+| ++.||+||+|++...
T Consensus 94 l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 94 LQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 34455667999999999999998877788888777 699999999999864
No 90
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.81 E-value=1.6e-08 Score=102.55 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=38.5
Q ss_pred HhcCCeEEeCCceEEEEEeCCEE-EEEEc---cCc--eEecCEEEEccCCCCC
Q 043512 265 NRSDVALHLHEEIESISYLREYY-ELNST---KGN--SYTCQITVVATPLDEL 311 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~v-~V~~~---~G~--~~~ad~VV~a~~~~~~ 311 (487)
++.|++|+++++|++|..+++++ +|++. +|+ +++||.||.|.+.+..
T Consensus 111 ~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 111 QDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 34699999999999999888876 35553 665 7999999999998864
No 91
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.80 E-value=1.6e-08 Score=105.74 Aligned_cols=42 Identities=33% Similarity=0.563 Sum_probs=37.6
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCC------CCeEEEEecCCCccce
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNW------HPRILMFERNGVVGGR 64 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~------G~~V~VlE~~~~~GGr 64 (487)
..+.+||+|||||++||++|+.|++ . |.+|+|+||.+.+|+.
T Consensus 32 ~~~~~DVvIVGaG~aGlaaA~~La~-----~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 32 FAEEADVVIVGAGPAGLSAATRLKQ-----LAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHH-----HHHHTTCCCCEEEECSSSSTTTT
T ss_pred cccCCCEEEECcCHHHHHHHHHHHh-----cccccCCCCcEEEEeCCCCCCCc
Confidence 3445899999999999999999999 7 9999999999888864
No 92
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.80 E-value=6.9e-09 Score=100.68 Aligned_cols=45 Identities=9% Similarity=0.146 Sum_probs=37.6
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEEEEEE---ccCceEecCEEEEccCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYYELNS---TKGNSYTCQITVVATPLD 309 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VV~a~~~~ 309 (487)
+++.|+++++++ |++|..+++.+.+.+ .++.++.+|.||+|++..
T Consensus 94 ~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 94 STKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCC
Confidence 345688999998 999998888888877 367789999999999874
No 93
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.79 E-value=5.1e-08 Score=101.87 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=36.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccce
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGR 64 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr 64 (487)
..+||+|||||++||+||+.|++ .|.+|+|+||....||.
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~-----~G~~V~vlEK~~~~~g~ 45 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQ-----SGQTCALLSKVFPTRSH 45 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CCCcEEEEecCCCCCCc
Confidence 45799999999999999999999 99999999998776543
No 94
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.79 E-value=5.4e-08 Score=101.53 Aligned_cols=41 Identities=29% Similarity=0.484 Sum_probs=37.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
..+||+|||||++||++|+.|++ .|++|+|+|+.+.+||..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~-----~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARD-----AGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHS-----SSCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-----CCCcEEEEecCCCCCcch
Confidence 35799999999999999999999 999999999999888754
No 95
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.78 E-value=1.5e-08 Score=101.57 Aligned_cols=54 Identities=11% Similarity=0.069 Sum_probs=45.2
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+.....+++.|++|+++++|++|..+++++ .|++.+|+++.||.||+|++...
T Consensus 197 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 197 SEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 4445555667799999999999999877766 78899999999999999999764
No 96
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.76 E-value=4.7e-08 Score=101.92 Aligned_cols=55 Identities=5% Similarity=-0.012 Sum_probs=42.0
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEE-EEEEc---cCc--eEecCEEEEccCCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYY-ELNST---KGN--SYTCQITVVATPLDEL 311 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v-~V~~~---~G~--~~~ad~VV~a~~~~~~ 311 (487)
..++..+++ +.|++|+.+++|++|..+++++ +|++. +|+ ++.||.||+|++++..
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 345555544 4699999999999999988774 56643 343 6999999999999864
No 97
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.72 E-value=1.8e-08 Score=104.34 Aligned_cols=46 Identities=17% Similarity=0.175 Sum_probs=38.8
Q ss_pred HHh-cCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCC
Q 043512 264 INR-SDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~-~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
+++ .|++| ++++|++|..+++++ +|.+.+|.++.||.||+|++...
T Consensus 133 Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 133 CENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 344 48898 688999999887776 79999998999999999999864
No 98
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.72 E-value=1.1e-07 Score=100.29 Aligned_cols=54 Identities=17% Similarity=0.124 Sum_probs=41.3
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEE-EEEE---ccCc--eEecCEEEEccCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYY-ELNS---TKGN--SYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v-~V~~---~~G~--~~~ad~VV~a~~~~~ 310 (487)
..+...|.+ +.|++|+.+++|++|..+++++ +|.. .+|+ .+.||.||+|++...
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 356666654 3599999999999999887764 5543 4665 489999999999864
No 99
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.71 E-value=2.7e-08 Score=101.48 Aligned_cols=54 Identities=15% Similarity=0.158 Sum_probs=44.6
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+.....+++.|++|+++++|++|..+++++.|.+.+|+++.+|.||+|++...
T Consensus 205 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 205 SQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCc
Confidence 334444556679999999999999987777888888998999999999999763
No 100
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.70 E-value=6.4e-08 Score=92.78 Aligned_cols=44 Identities=11% Similarity=0.222 Sum_probs=37.8
Q ss_pred HhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
++.|+++++ ++|++|..+++.+.|.+.+|+++.+|.||+|++..
T Consensus 70 ~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 70 FRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCC
Confidence 345788887 89999999888888888888899999999999964
No 101
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.69 E-value=2.4e-07 Score=97.07 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=41.9
Q ss_pred HHHHHHHHHh---cCCeEEeCCceEEEEEeCCEE-EEEE---ccCc--eEecCEEEEccCCCC
Q 043512 257 WQMAAGLINR---SDVALHLHEEIESISYLREYY-ELNS---TKGN--SYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~---~G~~i~~~~~V~~I~~~~~~v-~V~~---~~G~--~~~ad~VV~a~~~~~ 310 (487)
..+...|.+. .|++|+.+++|++|..+++++ +|.. .+|+ .+.|+.||+|++...
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4566666553 589999999999999887765 5554 3564 689999999999864
No 102
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.68 E-value=7.3e-08 Score=92.13 Aligned_cols=38 Identities=26% Similarity=0.405 Sum_probs=35.2
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCC--CCeEEEEecCCCccce
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNW--HPRILMFERNGVVGGR 64 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~--G~~V~VlE~~~~~GGr 64 (487)
+||+|||||++|++||+.|++ . |++|+|+|+++.+||.
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~-----~~~g~~V~v~e~~~~~ggg 105 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAK-----NRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHH-----HCTTSCEEEECSSSSCCTT
T ss_pred CCEEEECccHHHHHHHHHHHh-----cCCCCeEEEEecCcccccc
Confidence 499999999999999999999 7 9999999999988763
No 103
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.68 E-value=2.7e-07 Score=84.56 Aligned_cols=49 Identities=8% Similarity=-0.053 Sum_probs=40.0
Q ss_pred HHhc-CCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCCCCe
Q 043512 264 INRS-DVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDELNL 313 (487)
Q Consensus 264 ~~~~-G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~~~~ 313 (487)
+++. |++++ +++|++|..+++++ .|.+.+|++++||.||+|++.+....
T Consensus 78 ~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 78 LEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp HHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred HHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 4454 78888 68999999888876 78888888899999999999865433
No 104
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.68 E-value=5.2e-08 Score=99.06 Aligned_cols=44 Identities=18% Similarity=0.365 Sum_probs=36.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCe---EEEEecCCCccceeE
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPR---ILMFERNGVVGGRMA 66 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~---V~VlE~~~~~GGr~~ 66 (487)
.+||+|||||++|++||..|++... .|++ |+|+|+++.+||.+.
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~--~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQE--KGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHH--TTCCCCEEEEECSSSSSCGGGS
T ss_pred CCcEEEECccHHHHHHHHHHHhhhh--cCCCCCcEEEEEcCCCCCCEee
Confidence 3799999999999999999987322 5788 999999988988654
No 105
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.67 E-value=2.4e-07 Score=87.88 Aligned_cols=41 Identities=7% Similarity=0.011 Sum_probs=35.1
Q ss_pred CCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 268 DVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 268 G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
+++++ +++|++|..+++++.|.+.+|+++.+|.||+|++..
T Consensus 71 ~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 71 TIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp TEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred CeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 44554 569999999988899999999889999999999975
No 106
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.67 E-value=5.1e-08 Score=101.30 Aligned_cols=37 Identities=30% Similarity=0.265 Sum_probs=34.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVG 62 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~G 62 (487)
.+||+|||||++||++|..|++ .|.+|+|+||++.++
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~-----~G~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH-----RQVGHLVVEQTDGTI 62 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCCCEEEEeCCCCCC
Confidence 4799999999999999999999 999999999987664
No 107
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.67 E-value=1.8e-07 Score=82.07 Aligned_cols=44 Identities=11% Similarity=0.211 Sum_probs=38.5
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
+++.|++++++ +|++|..+++++.|++.+| ++.+|.||+|++..
T Consensus 66 ~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 66 ARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred HHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 44568999999 9999998877788888888 89999999999975
No 108
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.66 E-value=2.9e-08 Score=105.00 Aligned_cols=40 Identities=25% Similarity=0.297 Sum_probs=34.1
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
.+..+||+|||||++||++|+.|++. .|++|+|+||++.+
T Consensus 29 ~~~~~dVlIVGaGpaGL~~A~~La~~----~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 29 VPSQVDVLIVGCGPAGLTLAAQLAAF----PDIRTCIVEQKEGP 68 (639)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHTTC----TTSCEEEECSSSSC
T ss_pred CCCCCcEEEECcCHHHHHHHHHHHHh----CCCCEEEEeCCCCC
Confidence 34457999999999999999999972 39999999998754
No 109
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.65 E-value=5.6e-08 Score=97.04 Aligned_cols=54 Identities=13% Similarity=0.163 Sum_probs=44.8
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+.....+++.|++|+++++|++|..+++++ .|++.+|+++.||.||+|++...
T Consensus 187 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 187 SSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 3444455567799999999999999887776 78899999999999999999753
No 110
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.61 E-value=3.9e-08 Score=102.22 Aligned_cols=48 Identities=6% Similarity=0.113 Sum_probs=39.6
Q ss_pred HHHh-cCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCCC
Q 043512 263 LINR-SDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 263 l~~~-~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
.+++ .|++| ++++|+.|..+++++ +|.+.+|.++.||.||+|++.+..
T Consensus 133 ~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 133 ALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp HHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred HHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 3444 58898 688999999877766 888988988999999999998754
No 111
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.60 E-value=7.8e-07 Score=93.14 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=41.3
Q ss_pred HHHHHHHHHh---cC-CeEEeCCceEEEEEeCCEE-EEEE---ccCc--eEecCEEEEccCCCC
Q 043512 257 WQMAAGLINR---SD-VALHLHEEIESISYLREYY-ELNS---TKGN--SYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~---~G-~~i~~~~~V~~I~~~~~~v-~V~~---~~G~--~~~ad~VV~a~~~~~ 310 (487)
..+...|.+. .| ++|+++++|++|..+++++ +|.. .+|+ ++.|+.||+|++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 4566666553 47 8999999999999887764 4432 5675 689999999999864
No 112
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.59 E-value=1.8e-08 Score=97.56 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=37.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
.+||+|||||++||+||++|++.. .|++|+|+||++.+||.+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r---~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNR---PDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHC---TTSCEEEECSSSSCCTTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHhC---CCCeEEEEECCCCCCceEE
Confidence 469999999999999999997521 6999999999999999764
No 113
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.59 E-value=2.1e-07 Score=98.35 Aligned_cols=53 Identities=8% Similarity=-0.061 Sum_probs=39.5
Q ss_pred HHHHHHHHhc-CC-eEEeCCceEEEEEeCC---EE-EEEE---ccCc--eEecCEEEEccCCCC
Q 043512 258 QMAAGLINRS-DV-ALHLHEEIESISYLRE---YY-ELNS---TKGN--SYTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~~~~-G~-~i~~~~~V~~I~~~~~---~v-~V~~---~~G~--~~~ad~VV~a~~~~~ 310 (487)
.+....+++. |+ +|+.+++|++|..+++ ++ +|.. .+|+ .+.|+.||+|++...
T Consensus 155 ~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 155 PIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 3444444555 99 9999999999998766 65 5543 4564 689999999999764
No 114
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.56 E-value=1.5e-07 Score=90.12 Aligned_cols=46 Identities=13% Similarity=0.170 Sum_probs=37.9
Q ss_pred HHhcCCeEEeCCceEEEEEeC---CEEEEEEccCceEecCEEEEccCCC
Q 043512 264 INRSDVALHLHEEIESISYLR---EYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~---~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
+++.|++++++++|+.|..+. +.+.|.+.+|+++.+|.||+|++..
T Consensus 66 ~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 66 VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 345688999999999997653 3578888888889999999999975
No 115
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.56 E-value=2e-07 Score=96.08 Aligned_cols=47 Identities=9% Similarity=0.062 Sum_probs=39.2
Q ss_pred HHhcCCeEEeCCceEEEEEeCCE--EEEEEccCceEecCEEEEccCCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREY--YELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+++.|++++.+ +|++|..++++ ++|++.+|++++||.||.|.+.+..
T Consensus 183 a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 183 AIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 34569999999 99999985544 5888888888999999999999754
No 116
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.56 E-value=6.2e-08 Score=100.65 Aligned_cols=48 Identities=8% Similarity=0.180 Sum_probs=39.0
Q ss_pred HHHh-cCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCCC
Q 043512 263 LINR-SDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 263 l~~~-~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
.+++ .|++|+ +.+|+.|..+++++ +|.+.+|+++.||.||+|++.+..
T Consensus 126 ~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 126 IVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp HHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred HHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 3444 388884 66999999888887 588989989999999999998743
No 117
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.55 E-value=2.9e-07 Score=95.48 Aligned_cols=47 Identities=11% Similarity=0.142 Sum_probs=38.7
Q ss_pred HHhcCCeEEeCCceEEEEEeCCE--EEEEEccCceEecCEEEEccCCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREY--YELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+++.|++++.+ +|++|..++++ +.|++.+|++++||.||.|.+.+..
T Consensus 175 a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 175 AVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 34569999999 89999886543 5788888888999999999998754
No 118
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.54 E-value=5.1e-07 Score=91.86 Aligned_cols=36 Identities=33% Similarity=0.564 Sum_probs=32.9
Q ss_pred cEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccce
Q 043512 23 TVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGR 64 (487)
Q Consensus 23 dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr 64 (487)
||+|||||++|++||+.|++ .|.+|+|+||. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~-----~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR-----AGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCCCEEEEeCC-CCCch
Confidence 79999999999999999999 99999999998 55553
No 119
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.50 E-value=7e-08 Score=92.65 Aligned_cols=41 Identities=32% Similarity=0.552 Sum_probs=37.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
..+||+|||||+||++||.+|++ .|++|+|+|+. .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~-----~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASR-----ANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEESS-CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-----CCCCEEEEecC-CCCCeee
Confidence 46899999999999999999999 99999999995 6888764
No 120
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.48 E-value=3.6e-07 Score=94.92 Aligned_cols=49 Identities=10% Similarity=0.132 Sum_probs=40.0
Q ss_pred HHHHhc-CCeEEeCCceEEEEEeCCE--EEEEEccCceEecCEEEEccCCCCC
Q 043512 262 GLINRS-DVALHLHEEIESISYLREY--YELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 262 ~l~~~~-G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
..+++. |++|+++ +|++|..++++ ++|++.+|+++.||.||.|++.+..
T Consensus 202 ~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 202 RFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 334456 9999999 99999886543 5888888988999999999998753
No 121
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.43 E-value=7.1e-07 Score=92.00 Aligned_cols=46 Identities=11% Similarity=0.103 Sum_probs=38.1
Q ss_pred HhcCCeEEeCCceEEEEEe---CCEEEEEEccCceEecCEEEEccCCCC
Q 043512 265 NRSDVALHLHEEIESISYL---REYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~---~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
++.|++++.+++|++|..+ ++.+.|.+.+|+++.||.||+|++...
T Consensus 278 ~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 278 SDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 4568899999999999764 235788888898999999999999753
No 122
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.41 E-value=2e-06 Score=88.80 Aligned_cols=53 Identities=13% Similarity=0.064 Sum_probs=40.5
Q ss_pred HHHHHHHHh-cCCeEEeCCceEEEEEeCCE--EEEEEccCceEecCEEEEccCCCCC
Q 043512 258 QMAAGLINR-SDVALHLHEEIESISYLREY--YELNSTKGNSYTCQITVVATPLDEL 311 (487)
Q Consensus 258 ~l~~~l~~~-~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VV~a~~~~~~ 311 (487)
+.....+++ .|++++.+ +|++|..++++ +.|++.+|++++||.||.|.+.+..
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 333333445 79999999 59999886543 4788888778999999999998753
No 123
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.39 E-value=7.4e-07 Score=88.16 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=35.5
Q ss_pred hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCC
Q 043512 266 RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPL 308 (487)
Q Consensus 266 ~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~ 308 (487)
+.|++++++++|++|..++. .|++.+|+++.+|++|+|++.
T Consensus 74 ~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred HCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 56889999999999987665 466788989999999999996
No 124
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.31 E-value=5.2e-07 Score=88.55 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=33.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
+++||+|||||++|+++|+.|++ +|++|+|+||...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~-----~G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILAR-----KGYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CCCEEEEEeccCC
Confidence 46899999999999999999999 9999999999863
No 125
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.31 E-value=3.2e-07 Score=87.89 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=32.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+||+|||||+||++||.+|++ .|++|+|+|+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~-----~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGR-----SSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CCCCEEEEecCC
Confidence 35899999999999999999999 999999999975
No 126
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.31 E-value=3.8e-07 Score=87.19 Aligned_cols=39 Identities=23% Similarity=0.371 Sum_probs=35.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
.+||+|||||+||++||.+|++ .|++|+|+|+. .+||..
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g~~v~lie~~-~~gg~~ 44 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----ARKQIALFDNN-TNRNRV 44 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEECS-CCGGGG
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CCCCEEEEeCC-CCCCee
Confidence 4799999999999999999999 99999999996 467654
No 127
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.30 E-value=3.5e-07 Score=93.68 Aligned_cols=42 Identities=26% Similarity=0.332 Sum_probs=37.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
+.+||+|||||++|++||..|++ .|++|+|+|+++.+||.|.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~-----~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQ-----LGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH-----TTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-----CCCeEEEEecCCCCCCccc
Confidence 45899999999999999999999 9999999999999999653
No 128
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.28 E-value=5.8e-07 Score=90.87 Aligned_cols=42 Identities=26% Similarity=0.404 Sum_probs=38.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
...+||+|||||++||+||+.|++ .|++|+|+|+.+.+||..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~-----~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRA-----KGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHH-----HTCCEEEECSSSSCSTHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----CCCeEEEEeccCCCCCee
Confidence 456899999999999999999999 999999999999999865
No 129
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.28 E-value=1.4e-06 Score=92.45 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.+||+|||||++||++|..|++......|++|+|+||++.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5799999999999999999998100003899999999764
No 130
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.24 E-value=7.8e-07 Score=91.78 Aligned_cols=45 Identities=27% Similarity=0.372 Sum_probs=40.0
Q ss_pred CCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 17 TFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 17 ~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
..+..+||+|||||++|++||+.|++ .|++|+|+|+++.+||.+.
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~-----~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRA-----MGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHH-----TTCCEEEEESSSSSSCHHH
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHH-----CCCCEEEEeCCCCCCCccc
Confidence 34456899999999999999999999 9999999999987888654
No 131
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.24 E-value=3.9e-07 Score=92.65 Aligned_cols=54 Identities=13% Similarity=0.249 Sum_probs=43.3
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeC-CEEEEEEc--cCc--eEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLR-EYYELNST--KGN--SYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~-~~v~V~~~--~G~--~~~ad~VV~a~~~~~ 310 (487)
..+.+.+.+.+.++|+++++|++|..++ +++.|.+. +|+ ++.+|.||+|++...
T Consensus 214 ~~~~~~l~~~l~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p 272 (466)
T 3l8k_A 214 QDIVNTLLSILKLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRP 272 (466)
T ss_dssp HHHHHHHHHHHCCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEE
T ss_pred HHHHHHHHhcCEEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCc
Confidence 4556666665669999999999999877 78888776 675 799999999998653
No 132
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.23 E-value=6.4e-07 Score=86.11 Aligned_cols=41 Identities=27% Similarity=0.446 Sum_probs=36.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
..+||+|||||++|++||+.|++ .|++|+|+|+ ..+||.+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~-----~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAAR-----SGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEES-SSTTGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHh-----CCCcEEEEeC-CCCCcccc
Confidence 45799999999999999999999 9999999999 46888764
No 133
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.23 E-value=8.7e-07 Score=90.84 Aligned_cols=53 Identities=9% Similarity=0.022 Sum_probs=39.7
Q ss_pred hHHHHHHHHHhcCCeEEeCCceEEEEEeC--------CEEEEEEccC-----ceEecCEEEEccCC
Q 043512 256 NWQMAAGLINRSDVALHLHEEIESISYLR--------EYYELNSTKG-----NSYTCQITVVATPL 308 (487)
Q Consensus 256 ~~~l~~~l~~~~G~~i~~~~~V~~I~~~~--------~~v~V~~~~G-----~~~~ad~VV~a~~~ 308 (487)
+.+..+..+++++..|+++++|++|...+ +.+.|++.++ +++.|+.||+|++.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 34445555666777899999999998754 2478887654 36899999999994
No 134
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.21 E-value=6e-07 Score=87.66 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=33.0
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCC------CeEEEEecCCCccc
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWH------PRILMFERNGVVGG 63 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G------~~V~VlE~~~~~GG 63 (487)
+||+|||||++|+++|+.|++ +| .+|+|+|++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~-----~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHE-----RYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----hccccCCCceEEEEECCCCCCC
Confidence 589999999999999999999 87 99999999864433
No 135
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.21 E-value=6.6e-07 Score=91.07 Aligned_cols=41 Identities=27% Similarity=0.368 Sum_probs=38.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
.+||+|||||++|++||..|++ .|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCCeEEEEeCCCCcCCcCC
Confidence 5799999999999999999999 9999999999988998754
No 136
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.21 E-value=5.7e-07 Score=86.06 Aligned_cols=52 Identities=6% Similarity=-0.008 Sum_probs=41.7
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEE-EEEEc--cCc--eEecCEEEEccCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYY-ELNST--KGN--SYTCQITVVATPL 308 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v-~V~~~--~G~--~~~ad~VV~a~~~ 308 (487)
..+.+.+.++.|++|+++++|++|..+++++ .|++. +|+ ++.+|.||++++.
T Consensus 186 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 186 PSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 4566677777899999999999999887654 45544 775 7899999999886
No 137
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.21 E-value=6e-07 Score=91.20 Aligned_cols=51 Identities=10% Similarity=0.039 Sum_probs=41.5
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCE-EEEE-EccCceEecCEEEEccCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREY-YELN-STKGNSYTCQITVVATPLD 309 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~-v~V~-~~~G~~~~ad~VV~a~~~~ 309 (487)
+.....+++.|++|+++++|++|..++++ +.|+ +.+|+ +.+|.||+|++..
T Consensus 215 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 215 RGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred HHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 33444455679999999999999987555 6888 88887 9999999999875
No 138
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.21 E-value=8.8e-07 Score=94.54 Aligned_cols=44 Identities=23% Similarity=0.363 Sum_probs=40.1
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
.+..+||+|||||++|++||+.|++ .|++|+|+|+++.+||.+.
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~-----~G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGV-----RGYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHH-----HTCEEEEECSSSSSCTHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHH-----CCCeEEEEecCCCCCCEee
Confidence 3456899999999999999999999 9999999999999998765
No 139
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.20 E-value=8.3e-07 Score=85.56 Aligned_cols=41 Identities=29% Similarity=0.506 Sum_probs=37.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
..+||+|||||++|++||..|++ .|++|+|+|++ .+||.+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~-----~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGR-----AQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEESS-CTTGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-----cCCcEEEEeCC-CCCcccc
Confidence 35799999999999999999999 99999999998 6888764
No 140
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.19 E-value=9.4e-07 Score=90.12 Aligned_cols=52 Identities=10% Similarity=0.115 Sum_probs=41.2
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccC---ceEecCEEEEccCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREYYELNSTKG---NSYTCQITVVATPLD 309 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VV~a~~~~ 309 (487)
......+++.|++|+++++|++|..+++++.|++.++ +++.+|.||+|++..
T Consensus 225 ~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 225 KEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 3444445567999999999999998887777776654 679999999999865
No 141
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=1e-06 Score=89.76 Aligned_cols=42 Identities=33% Similarity=0.440 Sum_probs=38.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
+..+||+|||||++|++||..|++ .|++|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~-----~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQ-----LGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHH-----HTCCEEEEECSSSSCCSH
T ss_pred CccCCEEEECCCHHHHHHHHHHHH-----CCCeEEEEeCCCCccccc
Confidence 346899999999999999999999 999999999998899865
No 142
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.17 E-value=7.1e-07 Score=90.96 Aligned_cols=42 Identities=31% Similarity=0.413 Sum_probs=38.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
+..+||+|||||++|++||..|++ .|++|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~-----~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQ-----LGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEECSSSSSHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-----CCCeEEEEeCCCCcCCcc
Confidence 346899999999999999999999 999999999998899865
No 143
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.14 E-value=9.2e-07 Score=90.24 Aligned_cols=53 Identities=6% Similarity=-0.002 Sum_probs=41.7
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCE--EEEEEccC-ceEecCEEEEccCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREY--YELNSTKG-NSYTCQITVVATPLD 309 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G-~~~~ad~VV~a~~~~ 309 (487)
.+.....+++.|++|+++++|++|..++++ +.|++.+| +++.+|.||+|++..
T Consensus 229 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 229 QNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 334444455679999999999999876544 68888888 789999999999864
No 144
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.14 E-value=1e-06 Score=87.86 Aligned_cols=53 Identities=11% Similarity=0.036 Sum_probs=37.5
Q ss_pred HHHHHHHHH---hcCCeEEeCCceE---------EEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIE---------SISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~---------~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
..+.+.|.+ +.|++|+++++|+ +|..+++++.|++.+| ++.||.||+|++.+.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 445555544 4599999999999 8887777788888777 899999999999985
No 145
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.14 E-value=1.5e-06 Score=85.79 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=32.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCC--CCeEEEEecCCCc
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNW--HPRILMFERNGVV 61 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~--G~~V~VlE~~~~~ 61 (487)
+||+|||||++||++|..|++ . |++|+|+||++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~-----~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQ-----ARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHh-----cCCCCCEEEEECCCCC
Confidence 489999999999999999999 7 9999999998765
No 146
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.14 E-value=1.3e-06 Score=87.89 Aligned_cols=37 Identities=24% Similarity=0.454 Sum_probs=32.0
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+++||+|||||++||++|+.|++ .|++|+|+|++.
T Consensus 19 ~~m~~~ViIVGaGpaGl~~A~~La~-----~G~~V~viE~~~ 55 (430)
T 3ihm_A 19 SHMKKRIGIVGAGTAGLHLGLFLRQ-----HDVDVTVYTDRK 55 (430)
T ss_dssp ----CEEEEECCHHHHHHHHHHHHH-----TTCEEEEEESCC
T ss_pred CcCCCCEEEECCcHHHHHHHHHHHH-----CCCeEEEEcCCC
Confidence 3456899999999999999999999 999999999976
No 147
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.14 E-value=2.5e-05 Score=77.14 Aligned_cols=46 Identities=24% Similarity=0.314 Sum_probs=40.7
Q ss_pred HhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 265 NRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
++.|++|+++++|++|..+++++.|++.+|+++.+|.||+|++...
T Consensus 198 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 198 EGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCc
Confidence 4568999999999999988888888898998999999999998754
No 148
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.13 E-value=1.6e-06 Score=89.03 Aligned_cols=55 Identities=13% Similarity=0.011 Sum_probs=44.3
Q ss_pred HHHHHHHHH---hcCCeEEeCCceEEEEEeCCEEEEEEc---cCc--eEecCEEEEccCCCCC
Q 043512 257 WQMAAGLIN---RSDVALHLHEEIESISYLREYYELNST---KGN--SYTCQITVVATPLDEL 311 (487)
Q Consensus 257 ~~l~~~l~~---~~G~~i~~~~~V~~I~~~~~~v~V~~~---~G~--~~~ad~VV~a~~~~~~ 311 (487)
..+...|++ +.|++|+.+++|++|..+++.++|++. +|+ ++.||.||+|++.+..
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 456666654 459999999999999988876777773 565 7999999999999864
No 149
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.12 E-value=1.3e-06 Score=88.61 Aligned_cols=50 Identities=6% Similarity=0.070 Sum_probs=42.4
Q ss_pred HHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 261 AGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 261 ~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
...+++.|++|+++++|++|..+++++.|++.+|+++.+|.||+|++...
T Consensus 215 ~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 215 ERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCc
Confidence 33445569999999999999988888888888888999999999998753
No 150
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.12 E-value=8.9e-07 Score=90.83 Aligned_cols=55 Identities=9% Similarity=-0.014 Sum_probs=45.1
Q ss_pred hHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 256 NWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 256 ~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
..+.....+++.|++|+++++|++|..+++++.|++.+|+++.+|.||+|++...
T Consensus 225 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 225 AALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCc
Confidence 3444455566779999999999999987777888888888999999999998763
No 151
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.11 E-value=1.1e-06 Score=89.65 Aligned_cols=40 Identities=25% Similarity=0.355 Sum_probs=36.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
..+||+|||||++|++||..|++ .|++|+|+|++ .+||.|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~-----~G~~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAE-----LGARAAVVESH-KLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-----TTCCEEEEESS-CTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CCCeEEEEecC-CCCCcc
Confidence 35899999999999999999999 99999999986 688865
No 152
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.11 E-value=1.8e-06 Score=88.96 Aligned_cols=41 Identities=24% Similarity=0.412 Sum_probs=36.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC--------Ccccee
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG--------VVGGRM 65 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~--------~~GGr~ 65 (487)
..+||+|||||++|++||..|++ .|++|+|+|+++ .+||.|
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~-----~G~~V~liEk~~~~~~~~~~~~GGtc 79 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQ-----YGKKVMVLDFVTPTPLGTRWGLGGTC 79 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECCCCCCTTCCCCCTTCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CCCeEEEEeccCccccccCCCccccc
Confidence 35799999999999999999999 999999999964 577754
No 153
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.10 E-value=2e-06 Score=87.49 Aligned_cols=51 Identities=12% Similarity=0.167 Sum_probs=41.0
Q ss_pred HHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 259 MAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 259 l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.....+++.|++|+++++|++|..+++.+.|.+.+ .++.+|.||+|++...
T Consensus 221 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~-~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 221 AVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTTH-GELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEEETTEEEEEETT-EEEEESEEEECSCEEE
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEECC-cEEEcCEEEECCCCCc
Confidence 33444556799999999999999887777787764 4899999999998763
No 154
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.10 E-value=1.2e-06 Score=89.58 Aligned_cols=53 Identities=4% Similarity=-0.121 Sum_probs=42.8
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEcc----CceEecCEEEEccCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNSTK----GNSYTCQITVVATPLD 309 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~----G~~~~ad~VV~a~~~~ 309 (487)
.+.....+++.|++|+++++|++|..+++++.|++.+ |+++.+|.||+|++..
T Consensus 229 ~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 229 VKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred HHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 3444445566799999999999999887777777766 7789999999999865
No 155
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.09 E-value=2.6e-06 Score=91.41 Aligned_cols=43 Identities=23% Similarity=0.413 Sum_probs=39.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
...+||+|||||++|++||+.|++ .|++|+|+|+++.+||.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~-----~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLME-----SGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSTTTTHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHH-----CCCeEEEEeCCCCcCCeee
Confidence 346899999999999999999999 9999999999999998765
No 156
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=1.3e-06 Score=88.64 Aligned_cols=41 Identities=29% Similarity=0.336 Sum_probs=37.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
..+||+|||||++|++||..|++ .|++|+|+|+ +.+||.|.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-----~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ-----LGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-----HTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-----CCCEEEEEcc-CCCCCcCC
Confidence 45899999999999999999999 9999999999 67898764
No 157
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.08 E-value=1.6e-06 Score=88.64 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=37.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEec--------CCCcccee
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFER--------NGVVGGRM 65 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~--------~~~~GGr~ 65 (487)
+..+||+|||||++|++||..|++ .|++|+|+|| ...+||.|
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~-----~G~~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQ-----LGKKVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECCCCCCTTSCCCCTTCHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-----CCCeEEEEEecccccccccCCcCCee
Confidence 346899999999999999999999 9999999998 45678755
No 158
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.07 E-value=1.7e-06 Score=88.24 Aligned_cols=40 Identities=30% Similarity=0.331 Sum_probs=37.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
.+||+|||||++|++||..|++ .|++|+|+|+++.+||.+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEESSSSSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCCeEEEEecCCCcCCcc
Confidence 5799999999999999999999 999999999988898865
No 159
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.06 E-value=1.9e-06 Score=83.53 Aligned_cols=42 Identities=29% Similarity=0.420 Sum_probs=37.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
.+.+||+|||||++|+++|+.|++ .|++|+|+|+. .+||.+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~-----~g~~v~lie~~-~~gg~~~ 53 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR-----AQLAPLVFEGT-SFGGALM 53 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH-----TTCCCEEECCS-SCSCGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-----CCCeEEEEecC-CCCCcee
Confidence 456899999999999999999999 99999999985 6788653
No 160
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.06 E-value=2e-06 Score=87.25 Aligned_cols=52 Identities=12% Similarity=0.044 Sum_probs=43.3
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCc-eEecCEEEEccCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGN-SYTCQITVVATPLD 309 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VV~a~~~~ 309 (487)
+.....+++.|++|+++++|++|..+++++.|++.+|+ ++.+|.||+|++..
T Consensus 211 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 211 ATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC
Confidence 33444455679999999999999987777888888998 89999999999865
No 161
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.06 E-value=2.2e-06 Score=87.47 Aligned_cols=52 Identities=6% Similarity=-0.017 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCC-EEEEEEccCc-----eEecCEEEEccCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLRE-YYELNSTKGN-----SYTCQITVVATPLD 309 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~-----~~~ad~VV~a~~~~ 309 (487)
+.....+++.|++|+++++|++|..+++ .+.|++.+++ ++.+|.||+|++..
T Consensus 231 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 231 ELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccc
Confidence 3444445567999999999999998654 4667766653 78999999999864
No 162
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=2.1e-06 Score=87.02 Aligned_cols=53 Identities=4% Similarity=0.013 Sum_probs=41.2
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEc---cCceEecCEEEEccCCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREYYELNST---KGNSYTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~---~G~~~~ad~VV~a~~~~~ 310 (487)
+.....+++.|++|+++++|++|..+++++.|++. +++++.+|.||+|++...
T Consensus 215 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 215 AIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCc
Confidence 33444455679999999999999988777776654 456899999999998653
No 163
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=2.4e-06 Score=87.56 Aligned_cols=53 Identities=4% Similarity=0.132 Sum_probs=42.1
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCC-EEEEEEccCce-EecCEEEEccCCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLRE-YYELNSTKGNS-YTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~-~~ad~VV~a~~~~~ 310 (487)
......+++.|++|+++++|++|..+++ .+.|++.+|++ +.+|.||+|++...
T Consensus 221 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 221 NVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCC
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCc
Confidence 3344445567999999999999987653 47888888987 99999999998653
No 164
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.04 E-value=1.9e-06 Score=87.22 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=42.0
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCE-EEEEEccCceEecCEEEEccCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREY-YELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
+.....+++.|++|+++++|++|..++++ +.|++.+|+++.+|.||+|++..
T Consensus 212 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 212 ETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC
Confidence 34444455679999999999999876544 78888899889999999999865
No 165
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.02 E-value=2.4e-06 Score=87.42 Aligned_cols=39 Identities=21% Similarity=0.387 Sum_probs=36.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
.+||+|||||++|++||..|++ .|++|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~-----~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK-----HTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCCcEEEEeCC-CCCCcc
Confidence 4799999999999999999999 99999999996 588865
No 166
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.01 E-value=2.5e-06 Score=82.39 Aligned_cols=41 Identities=27% Similarity=0.531 Sum_probs=36.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEec----CCCccceeE
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFER----NGVVGGRMA 66 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~----~~~~GGr~~ 66 (487)
.+||+|||||++|+++|+.|++ .|++|+|+|+ ...+||.+.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~-----~g~~v~lie~~~~~~~~~gg~~~ 52 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAAR-----AELKPLLFEGWMANDIAPGGQLT 52 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTCCCEEECCSSBTTBCTTCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCCeEEEEeccCccccCCCceee
Confidence 4799999999999999999999 9999999999 566787653
No 167
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.99 E-value=3.9e-06 Score=88.13 Aligned_cols=39 Identities=28% Similarity=0.325 Sum_probs=36.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccce
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGR 64 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr 64 (487)
.+||+|||||++|++||+.|++ .|++|+|+|+.+..||.
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~-----~G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVG-----AGYKVAMFDIGEIDSGL 84 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSCCCSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHh-----CCCcEEEEeccCCCCCc
Confidence 5799999999999999999999 99999999999888873
No 168
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.99 E-value=5.8e-06 Score=87.95 Aligned_cols=42 Identities=19% Similarity=0.445 Sum_probs=38.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
...+||+|||||++|++||..|++ .|++|+|+|+++.+||..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~-----~g~~V~lie~~~~~gg~~ 412 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAA-----RGHQVTLFDAHSEIGGQF 412 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHT-----TTCEEEEEESSSSSCTTH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh-----CCCeEEEEeCCCCCCCee
Confidence 346899999999999999999999 999999999999999865
No 169
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.98 E-value=5.6e-05 Score=76.38 Aligned_cols=36 Identities=14% Similarity=0.329 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||.+|+.+|..|++ .|.+|+|+|+.+++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~-----~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHR-----LGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCEEEEEecCCcc
Confidence 4689999999999999999999 99999999998763
No 170
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.98 E-value=3.1e-06 Score=81.24 Aligned_cols=40 Identities=20% Similarity=0.356 Sum_probs=36.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
.+||+|||||++|++||+.|++ .|++|+|+|+. .+||.+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAAR-----ANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTCCCEEECCS-STTGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCCcEEEEccC-CCCceEe
Confidence 5799999999999999999999 99999999975 6888653
No 171
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.97 E-value=4.9e-05 Score=77.02 Aligned_cols=45 Identities=7% Similarity=0.100 Sum_probs=38.1
Q ss_pred HhcCCeEEeCCceEEEEEeCCEEEEEEc-c--Cc--eEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISYLREYYELNST-K--GN--SYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~-~--G~--~~~ad~VV~a~~~~ 309 (487)
++.|++|+++++|++|..+++++.|++. + |+ ++.+|.||+|++..
T Consensus 221 ~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 221 EKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 4568999999999999988877777765 6 76 89999999999865
No 172
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.97 E-value=4e-06 Score=84.79 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=43.5
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+.....+++.|++|+++++|++|..+++++.|.+.+| ++.+|.||+|++...
T Consensus 192 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 192 VAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCC
Confidence 34444555667999999999999998777788888777 899999999999764
No 173
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.97 E-value=3.3e-06 Score=85.73 Aligned_cols=53 Identities=13% Similarity=0.105 Sum_probs=41.3
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEc-cC--ceEecCEEEEccCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNST-KG--NSYTCQITVVATPLD 309 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~-~G--~~~~ad~VV~a~~~~ 309 (487)
.+.....+++.|++|+++++|++|..+++++.|.+. +| +++.+|.||+|++..
T Consensus 215 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 215 SKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 344444556679999999999999987766767664 56 679999999999865
No 174
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.91 E-value=5.1e-06 Score=84.35 Aligned_cols=39 Identities=31% Similarity=0.391 Sum_probs=35.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcccee
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRM 65 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~ 65 (487)
.+||+|||||++|++||..|++ .|++|+|+|+++ +||.|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~-----~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ-----LGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCCeEEEEeCCC-CCCCC
Confidence 4899999999999999999999 999999999986 77754
No 175
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.90 E-value=9.9e-06 Score=78.44 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=33.9
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccc
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGG 63 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GG 63 (487)
+||+|||||++|+.||+.|++ .|++|+|+|++...+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~-----~G~~V~liE~~~~~~t 38 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR-----LGVPVRLFEMRPKRMT 38 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCCEEEECCTTTSCC
T ss_pred CCEEEECchHHHHHHHHHHHH-----CCCcEEEEeccCCcCC
Confidence 699999999999999999999 9999999999875443
No 176
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.90 E-value=7.2e-06 Score=85.88 Aligned_cols=51 Identities=10% Similarity=0.199 Sum_probs=40.2
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
+.....+++.|++|+++++|++|..+++ .|++.+|+++.+|.||+|++...
T Consensus 232 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 232 AYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCCCC
Confidence 3444445567999999999999986555 36677888999999999999753
No 177
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.88 E-value=5.2e-06 Score=87.52 Aligned_cols=35 Identities=20% Similarity=0.564 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC------CCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW------HPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~------G~~V~VlE~~~~ 60 (487)
.+||+|||||++||+||+.|++ . |.+|+|+||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~-----~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVR-----WADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----HHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHh-----hccccCCCCcEEEEEecCC
Confidence 5799999999999999999999 7 999999999864
No 178
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.87 E-value=9.2e-06 Score=81.58 Aligned_cols=41 Identities=27% Similarity=0.357 Sum_probs=35.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccce
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGR 64 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr 64 (487)
++||+|||||++|++||+.|++.. .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~---~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLM---PDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC---TTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCC---CCCeEEEECCCCCCCcC
Confidence 479999999999999999999943 68999999999877653
No 179
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.86 E-value=8.6e-06 Score=82.41 Aligned_cols=41 Identities=32% Similarity=0.566 Sum_probs=37.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCC--CeEEEEecCCCcccee
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWH--PRILMFERNGVVGGRM 65 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G--~~V~VlE~~~~~GGr~ 65 (487)
..+||+|||||++|++||..|++ .| ++|+|+|+.+.+||+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLK-----HHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-----HCSSCEEEEECSSSSSCTHH
T ss_pred CCceEEEECcCHHHHHHHHHHHh-----cCCCCCEEEEeCCCcCCcee
Confidence 45799999999999999999999 77 9999999999998875
No 180
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.85 E-value=1e-05 Score=90.02 Aligned_cols=41 Identities=29% Similarity=0.477 Sum_probs=37.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCCCcccee
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNGVVGGRM 65 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~~~GGr~ 65 (487)
..+||+|||||++|++||..|++ .|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~-----~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR-----LGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH-----TTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCCcEEEEeCCCCCCccc
Confidence 36799999999999999999999 999 799999999999864
No 181
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.84 E-value=5.2e-06 Score=84.90 Aligned_cols=49 Identities=6% Similarity=0.045 Sum_probs=40.6
Q ss_pred HHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 262 GLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 262 ~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
..+++.|++|+++++|++|..+++...|.+.+|+++.+|.||++++...
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 5556779999999999999865544467788888999999999999764
No 182
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.84 E-value=0.0001 Score=73.40 Aligned_cols=47 Identities=11% Similarity=0.203 Sum_probs=39.7
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
+++.|++|+++++|++|..+++...|++.+|+++.||.||++++...
T Consensus 195 l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 195 LTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 34569999999999999876544588899999999999999999754
No 183
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.84 E-value=8.8e-06 Score=89.84 Aligned_cols=41 Identities=20% Similarity=0.425 Sum_probs=38.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
.+||+|||||++|++||..|++ .|++|+|+|+++.+||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~-----~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR-----SGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCCcEEEEeCCCCCCceec
Confidence 4689999999999999999999 9999999999999999886
No 184
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.83 E-value=1.1e-05 Score=81.40 Aligned_cols=41 Identities=27% Similarity=0.280 Sum_probs=34.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccce
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGR 64 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr 64 (487)
++||+|||||++|++||+.|++.. .|++|+|+|+++.+++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~---~~~~V~vie~~~~~~~~ 43 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK---PEWDVKVFEATEWVSHA 43 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---TTSEEEEECSSSCCC--
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC---cCCCEEEEECCCccccC
Confidence 479999999999999999999932 38999999999877653
No 185
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.83 E-value=8.1e-06 Score=83.43 Aligned_cols=53 Identities=8% Similarity=0.089 Sum_probs=42.8
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCC-EEEEEEccCceEecCEEEEccCCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLRE-YYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
+.....+++.|++|+++++|++|..+++ .+.|++.+|+++.+|.||+|++...
T Consensus 235 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 235 KQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCc
Confidence 3444445567999999999999988754 4788888998899999999998653
No 186
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.82 E-value=0.00012 Score=73.89 Aligned_cols=36 Identities=19% Similarity=0.428 Sum_probs=33.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYAN-----FGTKVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCcEEEEEcCCcc
Confidence 4789999999999999999999 99999999998764
No 187
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.81 E-value=9.5e-06 Score=83.82 Aligned_cols=40 Identities=33% Similarity=0.493 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccce
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGR 64 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr 64 (487)
...+||+|||||++||+||+.|++ |.+|+|+||.+..||.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~------G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD------QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT------TSCEEEECSSCTTC--
T ss_pred CCCCCEEEECccHHHHHHHHHHhc------CCcEEEEECCCCCCCC
Confidence 346899999999999999999985 7899999998866653
No 188
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.81 E-value=7.3e-06 Score=83.84 Aligned_cols=53 Identities=8% Similarity=0.111 Sum_probs=42.7
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCC-EEEEEEccCceEecCEEEEccCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLRE-YYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
.+.....+++.|++|+++++|++|..+++ .+.|++.+|+++.+|.||+|++..
T Consensus 238 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 238 REEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCc
Confidence 33444445667999999999999987654 478888899899999999999865
No 189
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.79 E-value=1.5e-05 Score=79.46 Aligned_cols=50 Identities=12% Similarity=0.114 Sum_probs=40.1
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.......+++.|++|+++++|++|. ++ .|++.+|+++.+|.||++++...
T Consensus 190 ~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 190 ADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCc
Confidence 3444455567799999999999998 34 67778898999999999998753
No 190
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.78 E-value=0.00011 Score=74.02 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=33.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..++|+|||||.+|+.+|..|++ .|.+|+|+|+.+++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~-----~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAK-----AGKKVTVIDILDRP 184 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-----CCCeEEEEecCccc
Confidence 45789999999999999999999 99999999997653
No 191
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.78 E-value=1.1e-05 Score=83.00 Aligned_cols=52 Identities=6% Similarity=-0.056 Sum_probs=44.1
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
+.+...+++.|+++++++.|+++...++++.|.+.+++.+.+|.|++|++-.
T Consensus 267 ~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 267 VKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp HHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccccc
Confidence 3344445567999999999999999999999999888899999999999854
No 192
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.76 E-value=2.1e-05 Score=78.47 Aligned_cols=37 Identities=30% Similarity=0.382 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCe--EEEEecCCCcc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPR--ILMFERNGVVG 62 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~--V~VlE~~~~~G 62 (487)
++||+|||||++|++||..|++ .|++ |+|+|+++.++
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~-----~g~~~~V~li~~~~~~~ 40 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRA-----EGFEGRISLIGDEPHLP 40 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TTCCSEEEEEECSSSSS
T ss_pred CCCEEEEcccHHHHHHHHHHHc-----cCcCCeEEEEECCCCCC
Confidence 4689999999999999999999 8887 99999988755
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.75 E-value=1.4e-05 Score=81.60 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=44.8
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+.....+++.|++|+++++|++|..+++++.|++.+|+++.||.||++++...
T Consensus 229 ~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 229 SNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCc
Confidence 334444556679999999999999987777888889999999999999998763
No 194
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.75 E-value=1.8e-05 Score=80.78 Aligned_cols=51 Identities=12% Similarity=0.266 Sum_probs=38.7
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
+.....+++.|++|+++++|++|.. ++++ .|.+ +|+++.+|.||+|++...
T Consensus 240 ~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 240 DLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 3444445567999999999999986 4444 4555 677899999999998653
No 195
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.74 E-value=1.6e-05 Score=79.13 Aligned_cols=50 Identities=22% Similarity=0.315 Sum_probs=39.1
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
......++++.|++++++++|++|.. ++ |++.+|+++.+|.||++++...
T Consensus 221 ~~~~~~~l~~~gV~~~~~~~v~~i~~--~~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 221 RKAVASIYNQLGIKLVHNFKIKEIRE--HE--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEECS--SE--EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHCCCEEEcCCceEEECC--Ce--EEECCCCEEeeeEEEECCCCCc
Confidence 34445556677999999999999964 33 6778899999999999988643
No 196
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.74 E-value=1.9e-05 Score=79.87 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=41.5
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEE-EEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYE-LNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.+.....+++.|++|+++++|++|..+++++. |.+ +|+++.+|.||+|++...
T Consensus 194 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 194 TDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCC
Confidence 33444455677999999999999997677764 554 778899999999998753
No 197
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.74 E-value=0.00027 Score=71.47 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=32.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~-----~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRS-----FGSEVTVVALEDR 200 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----cCCEEEEEEcCCc
Confidence 4689999999999999999999 9999999998765
No 198
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.73 E-value=0.00022 Score=71.96 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=32.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVING-----LGAKTHLFEMFDA 201 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----cCCEEEEEEeCCc
Confidence 4689999999999999999999 9999999999765
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.71 E-value=2.1e-05 Score=79.39 Aligned_cols=51 Identities=14% Similarity=0.212 Sum_probs=38.5
Q ss_pred HHHHHHHHhcCCeEEeCCceEEEEEeCCEE-EEEEccCceEecCEEEEccCCCC
Q 043512 258 QMAAGLINRSDVALHLHEEIESISYLREYY-ELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 258 ~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
+.....+++.|++|+++++|++|..+ +++ .|.+ +|+++.+|.||+|++...
T Consensus 195 ~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 195 DVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCC
Confidence 34444455679999999999999865 444 5666 556899999999998653
No 200
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.71 E-value=0.00014 Score=73.90 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSR-----LGSKVTVVEFQPQI 218 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH-----cCCEEEEEEeCCcc
Confidence 4689999999999999999999 99999999997653
No 201
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.70 E-value=2.2e-05 Score=80.00 Aligned_cols=51 Identities=8% Similarity=0.198 Sum_probs=38.0
Q ss_pred HHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 259 MAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 259 l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.....+++.|++|+++++|++|..+++...|.+.+ .++.+|.||+|++...
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~-~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 232 YIYKEADKHHIEILTNENVKAFKGNERVEAVETDK-GTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETT-EEEECSEEEECSCEEE
T ss_pred HHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECC-CEEEcCEEEECcCCCc
Confidence 33444556799999999999998754333566654 4899999999998753
No 202
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.70 E-value=1.6e-05 Score=80.43 Aligned_cols=43 Identities=21% Similarity=0.070 Sum_probs=37.6
Q ss_pred CCcEEEECCChhHHHHHHHHHH-hcCCCC----CCeEEEEecCCCccceeE
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQ-YSSKNW----HPRILMFERNGVVGGRMA 66 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~-~~~~~~----G~~V~VlE~~~~~GGr~~ 66 (487)
.+||+|||||++|++||..|++ .. . |++|+|+|+.+.+||.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~---~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAAD---TTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHH---HSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCc---cccCCCCeEEEEecCCCCCCccc
Confidence 4699999999999999999988 42 2 899999999988998763
No 203
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.70 E-value=2.3e-05 Score=82.25 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=32.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEec
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFER 57 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~ 57 (487)
...+||+|||||++|++||..|++ .|++|+|+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~-----~g~~v~liE~ 138 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAK-----YGAKTAVLDY 138 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECC
T ss_pred cccccEEEECCCccHHHHHHHHHh-----CCCeEEEEec
Confidence 446899999999999999999999 9999999997
No 204
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.69 E-value=2.2e-05 Score=81.31 Aligned_cols=37 Identities=30% Similarity=0.441 Sum_probs=33.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
...+|+||||||++|+++|++|++ +|++|+|+|+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~-----~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE-----AGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHh-----CCCeEEEEeCCCC
Confidence 456899999999999999999999 9999999999764
No 205
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.69 E-value=2.2e-05 Score=81.69 Aligned_cols=54 Identities=19% Similarity=0.296 Sum_probs=43.9
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEE-------------------eCCEEEEEEccCceEecCEEEEccCCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISY-------------------LREYYELNSTKGNSYTCQITVVATPLDE 310 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~-------------------~~~~v~V~~~~G~~~~ad~VV~a~~~~~ 310 (487)
.......+++.|++++++++|++|.. +++++.+.+.+|+++.+|.||+|++...
T Consensus 195 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 267 (565)
T 3ntd_A 195 AGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRP 267 (565)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCcc
Confidence 34444556677999999999999987 3567788888898999999999999764
No 206
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.68 E-value=0.00026 Score=72.43 Aligned_cols=36 Identities=14% Similarity=0.308 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+++|||+|..|+-.|..|++ .|.+|+++|+.+++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~-----~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTE-----LGVPVTVVASQDHV 217 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHH-----TTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCeEEEEEcCCcc
Confidence 4689999999999999999999 99999999998763
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.67 E-value=0.00034 Score=70.03 Aligned_cols=45 Identities=7% Similarity=0.128 Sum_probs=38.3
Q ss_pred HhcCCeEEeCCceEEEEE--eCCEE-EEEEccCceEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISY--LREYY-ELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~--~~~~v-~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
++.|++|+++++|++|.. +++++ .|++.+|+++.+|.||+|++..
T Consensus 202 ~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 202 REAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 456899999999999987 45555 7888899899999999999965
No 208
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.67 E-value=3.9e-05 Score=76.96 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=33.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCCCcc
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNGVVG 62 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~~~G 62 (487)
+.+||+|||||++|++||..|++ .|+ +|+|+|+.+.++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~-----~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRA-----SGWEGNIRLVGDATVIP 42 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH-----TTCCSEEEEECSCCSCC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHc-----cCcCCCEEEEECCCCCC
Confidence 45899999999999999999999 888 899999986543
No 209
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.63 E-value=0.00028 Score=71.65 Aligned_cols=45 Identities=11% Similarity=0.247 Sum_probs=36.8
Q ss_pred HhcCCeEEeCCceEEEEEeCCE-EEEEE-----ccCceEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISYLREY-YELNS-----TKGNSYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~-v~V~~-----~~G~~~~ad~VV~a~~~~ 309 (487)
++.|++|+++++|++|..++++ +.|++ .+++++.+|.||+|++..
T Consensus 231 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 231 QKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 4568999999999999987765 66663 456789999999999865
No 210
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.63 E-value=0.00024 Score=72.47 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC---CCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW---HPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~---G~~V~VlE~~~~~ 61 (487)
..+++|||||..|+-+|..|++ . |.+|+|+|+.+++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~-----~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNA-----YKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH-----HSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----hccCcCeEEEEEcCCCc
Confidence 4689999999999999999999 7 9999999998753
No 211
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.62 E-value=2.4e-05 Score=80.70 Aligned_cols=38 Identities=29% Similarity=0.401 Sum_probs=31.7
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+++|+||||||.+|+.+|.+|++. .|++|+|||+..
T Consensus 14 ~~~~yD~IIVGsG~aG~v~A~rLse~----~~~~VLvLEaG~ 51 (526)
T 3t37_A 14 HAPNCDIVIVGGGSAGSLLAARLSED----PDSRVLLIEAGE 51 (526)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHTTS----TTSCEEEECSSB
T ss_pred CCCCeeEEEECccHHHHHHHHHHHhC----CCCeEEEEcCCC
Confidence 34579999999999999999999972 578999999964
No 212
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.61 E-value=0.00054 Score=68.08 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+++|+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATART-----AGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCEEEEEEeCCcc
Confidence 5789999999999999999999 99999999998753
No 213
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.60 E-value=0.00037 Score=70.29 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+++|||+|..|+-+|..|++ .|.+|+++|+.+++
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVK-----MKKTVHVFESLENL 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCeEEEEEccCcc
Confidence 4679999999999999999999 99999999997653
No 214
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.59 E-value=5e-05 Score=75.34 Aligned_cols=43 Identities=9% Similarity=0.196 Sum_probs=38.3
Q ss_pred hcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCC
Q 043512 266 RSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPL 308 (487)
Q Consensus 266 ~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~ 308 (487)
+.|++++++++|+.++.+++...|.+.+|+++.+|.||++.|.
T Consensus 214 ~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 214 NALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp TCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred hcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCc
Confidence 4589999999999999888777889999999999999998765
No 215
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.59 E-value=0.00034 Score=71.96 Aligned_cols=47 Identities=4% Similarity=0.012 Sum_probs=39.3
Q ss_pred HHhcCCeEEeCCceEEEEEeCCE----EEEEEccCc-eEecCEEEEccCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREY----YELNSTKGN-SYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~----v~V~~~~G~-~~~ad~VV~a~~~~~ 310 (487)
+++.|++|+++++|++|..++++ +.|++.+|+ ++.||.||+|++...
T Consensus 265 l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 265 MKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred HHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 34569999999999999976554 678888887 899999999999764
No 216
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.58 E-value=5.2e-05 Score=76.06 Aligned_cols=52 Identities=8% Similarity=0.196 Sum_probs=41.1
Q ss_pred hHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccC--ceEecCEEEEccCCC
Q 043512 256 NWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKG--NSYTCQITVVATPLD 309 (487)
Q Consensus 256 ~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VV~a~~~~ 309 (487)
..++++.++++.|+++++++.|++|+ .+++.+...+| +++.+|.||++++..
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCC
Confidence 45677778888899999999999984 55666665554 579999999998864
No 217
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.00048 Score=70.01 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=32.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||||..|+-.|..|++ .|.+|+|+|+.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~-----~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHG-----LGSETHLVIRGET 219 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCceEEEEeCCc
Confidence 4689999999999999999999 9999999999765
No 218
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.57 E-value=0.00025 Score=72.22 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~-----~G~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYST-----LGSRLDVVEMMDGL 220 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH-----HTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCeEEEEEECCcc
Confidence 4689999999999999999999 99999999987653
No 219
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.57 E-value=4.9e-05 Score=74.99 Aligned_cols=34 Identities=29% Similarity=0.544 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCC--CeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWH--PRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G--~~V~VlE~~~ 59 (487)
.+||+|||||++|++||..|++ .| .+|+|+|+++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCCCCCEEEEECCC
Confidence 5899999999999999999999 88 5799999875
No 220
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.54 E-value=4.8e-05 Score=74.59 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
.+.....+++.|++|+++++|++|. .+ .|++.+|+ +.+|.||+|++..
T Consensus 186 ~~~l~~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 186 SNMIKDMLEETGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHHHHHTTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEE
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCC
Confidence 3444555667799999999999997 23 46677887 9999999999865
No 221
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.54 E-value=0.00044 Score=70.01 Aligned_cols=46 Identities=11% Similarity=0.177 Sum_probs=36.4
Q ss_pred HhcCCeEEeCCceEEEEEeCCEEEEEEc--cC--ceEecCEEEEccCCCC
Q 043512 265 NRSDVALHLHEEIESISYLREYYELNST--KG--NSYTCQITVVATPLDE 310 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VV~a~~~~~ 310 (487)
++.|++|+++++|++|..+++++.|++. +| +++.+|.||+|++...
T Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEE
T ss_pred hcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCccc
Confidence 4568999999999999987766766665 66 6799999999998653
No 222
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.53 E-value=0.00078 Score=67.87 Aligned_cols=36 Identities=28% Similarity=0.360 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-.|..|++ .|.+|+++|+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSN-----QNYNVNLIDGHERV 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT-----TTCEEEEEESSSST
T ss_pred CCeEEEECcCHHHHHHHHHHHh-----cCCEEEEEEcCCch
Confidence 4689999999999999999999 99999999997653
No 223
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.51 E-value=0.00051 Score=70.09 Aligned_cols=36 Identities=17% Similarity=0.347 Sum_probs=32.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC---CCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW---HPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~---G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-.|..|++ . |.+|+|+|+.+++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~-----~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNA-----YKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH-----HCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----hCCCCCeEEEEEcCCcc
Confidence 4689999999999999999999 7 9999999987653
No 224
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.50 E-value=6e-05 Score=75.73 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
++||+|||||++|++||..|++... .|++|+|+|+++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~--~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALG--SGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHG--GGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCC--CcCEEEEEeCCCC
Confidence 5799999999999999999998322 6899999999875
No 225
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.49 E-value=0.00069 Score=68.52 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=33.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKN-----YGVDVTIVEFLPRA 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHH-----cCCeEEEEEcCCcc
Confidence 4689999999999999999999 99999999998753
No 226
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.49 E-value=5.4e-05 Score=77.39 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=34.0
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.+.+++|||||||.||+++|..|++ .+++|+|+|+++.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~-----~~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDT-----KKYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCT-----TTCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhh-----CCCcEEEECCCCC
Confidence 3456789999999999999999999 9999999999863
No 227
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.48 E-value=0.00074 Score=70.13 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+++|+.+++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHH-----LGIKTTLLELADQV 186 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----cCCcEEEEEcCCcc
Confidence 3589999999999999999999 99999999997653
No 228
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.47 E-value=6.8e-05 Score=75.32 Aligned_cols=50 Identities=16% Similarity=0.244 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccCceEecCEEEEccCCC
Q 043512 256 NWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKGNSYTCQITVVATPLD 309 (487)
Q Consensus 256 ~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~a~~~~ 309 (487)
..+.+...+++.|++++++++|+++. ++ .|++.+|+++.+|.||++++..
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~--~~--~v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAIN--GN--EITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEE--TT--EEEETTSCEEECSEEEECCCEE
T ss_pred hHHHHHHHhhccceEEEeccEEEEec--CC--eeeecCCeEEeeeeEEEEecee
Confidence 34455556667799999999999885 33 3667899999999999999864
No 229
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.46 E-value=0.00067 Score=69.15 Aligned_cols=37 Identities=16% Similarity=0.309 Sum_probs=33.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
...+|+|||||..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~-----~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQR-----KGKEVVLIDVVDTC 229 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CCCeEEEEEcccch
Confidence 45789999999999999999999 99999999998753
No 230
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.46 E-value=0.00073 Score=69.03 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||||..|+-.|..|++ .|.+|+|+|+.++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~-----~g~~Vtlv~~~~~ 210 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKR-----LGIDSYIFARGNR 210 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT-----TTCEEEEECSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHH-----cCCeEEEEecCCc
Confidence 5689999999999999999999 9999999999776
No 231
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.45 E-value=6.3e-05 Score=78.02 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=33.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCC-CeEEEEecCCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWH-PRILMFERNGV 60 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G-~~V~VlE~~~~ 60 (487)
...+|+||||||.||+++|.+|++ .| .+|+|+|+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse-----~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAE-----NPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTT-----STTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHh-----CCCCcEEEEecCCC
Confidence 346899999999999999999999 77 79999999754
No 232
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.38 E-value=0.0001 Score=75.43 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=34.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcc
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVG 62 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~G 62 (487)
..+|++|||||++|+++|++|++ .|++|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~-----~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE-----AGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCCcEEEEeCCCCCC
Confidence 45899999999999999999999 999999999987544
No 233
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.38 E-value=0.00037 Score=70.62 Aligned_cols=47 Identities=9% Similarity=0.208 Sum_probs=36.8
Q ss_pred HHhcCCeEEeCCceEEEEEeCCEEEEEEc---cC--ceEecCEEEEccCCCC
Q 043512 264 INRSDVALHLHEEIESISYLREYYELNST---KG--NSYTCQITVVATPLDE 310 (487)
Q Consensus 264 ~~~~G~~i~~~~~V~~I~~~~~~v~V~~~---~G--~~~~ad~VV~a~~~~~ 310 (487)
+++.|++|+++++|++|..+++++.|++. +| +++.+|.||+|++...
T Consensus 228 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 228 LEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred HHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCc
Confidence 34568999999999999876666666654 44 6799999999998653
No 234
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.37 E-value=8.1e-05 Score=77.19 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=33.3
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
....+|+||||||.+|+++|.+|++. .+.+|+|+|+.+
T Consensus 16 ~~~~yDyIIVGgG~AG~vlA~RLse~----~~~~VLlLEaG~ 53 (583)
T 3qvp_A 16 SGRTVDYIIAGGGLTGLTTAARLTEN----PNISVLVIESGS 53 (583)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHTTS----TTCCEEEECSSC
T ss_pred CCCCccEEEECCcHHHHHHHHHHHhC----CCCcEEEEecCC
Confidence 34579999999999999999999972 589999999976
No 235
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.36 E-value=0.00013 Score=74.64 Aligned_cols=40 Identities=25% Similarity=0.176 Sum_probs=35.5
Q ss_pred CCCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 16 PTFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 16 ~~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
......+|++|||||.+|+++|++|++ .|.+|+|+|+...
T Consensus 6 ~~~~~~~d~~iiG~G~~g~~~a~~l~~-----~~~~v~~~e~~~~ 45 (507)
T 1coy_A 6 LADGDRVPALVIGSGYGGAVAALRLTQ-----AGIPTQIVEMGRS 45 (507)
T ss_dssp CCTTCEEEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSCC
T ss_pred CCcCCcCCEEEECCCHHHHHHHHHHHH-----CCCcEEEEECCCC
Confidence 344567899999999999999999999 9999999999754
No 236
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.35 E-value=0.0014 Score=66.48 Aligned_cols=35 Identities=17% Similarity=0.290 Sum_probs=32.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-.|..|++ .|.+|+++|+.++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWAR-----LGAEVTVLEAMDK 214 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCcEEEEecCCC
Confidence 4689999999999999999999 9999999999765
No 237
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.34 E-value=0.00078 Score=68.44 Aligned_cols=37 Identities=30% Similarity=0.430 Sum_probs=33.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
...+|+|||||..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~~ 221 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVE-----LGKKVRMIERNDHI 221 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHH-----TTCEEEEECCGGGT
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-----cCCeEEEEEeCCch
Confidence 45789999999999999999999 99999999997654
No 238
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.32 E-value=0.0013 Score=66.48 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+++|+.+++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFAR-----LGSKVTVLARNTLF 211 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----cCCEEEEEEECCcc
Confidence 4689999999999999999999 99999999997653
No 239
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.31 E-value=0.0012 Score=67.36 Aligned_cols=45 Identities=9% Similarity=0.194 Sum_probs=37.5
Q ss_pred HhcCCeEEeCCceEEEEEeCCEEEEEEcc---C--ceEecCEEEEccCCC
Q 043512 265 NRSDVALHLHEEIESISYLREYYELNSTK---G--NSYTCQITVVATPLD 309 (487)
Q Consensus 265 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~~---G--~~~~ad~VV~a~~~~ 309 (487)
++.|++|+++++|++|..+++++.|.+.+ | +++.+|.||+|++..
T Consensus 250 ~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 250 TKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred HhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 45689999999999999988887776653 5 579999999999875
No 240
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.29 E-value=0.0012 Score=67.30 Aligned_cols=41 Identities=15% Similarity=0.051 Sum_probs=35.2
Q ss_pred CeEEeCCceEEEEEeCCEEEEEEc--cC--ceEecCEEEEccCCC
Q 043512 269 VALHLHEEIESISYLREYYELNST--KG--NSYTCQITVVATPLD 309 (487)
Q Consensus 269 ~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VV~a~~~~ 309 (487)
++|+++++|++|..+++++.|++. +| +++.+|.||+|++..
T Consensus 229 V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 229 FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCE
T ss_pred cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCc
Confidence 799999999999988877777764 67 689999999999875
No 241
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.26 E-value=0.003 Score=63.70 Aligned_cols=44 Identities=18% Similarity=0.172 Sum_probs=37.4
Q ss_pred cCCeEEeCCceEEEEEeCCEEEEEEc---cCc--eEecCEEEEccCCCC
Q 043512 267 SDVALHLHEEIESISYLREYYELNST---KGN--SYTCQITVVATPLDE 310 (487)
Q Consensus 267 ~G~~i~~~~~V~~I~~~~~~v~V~~~---~G~--~~~ad~VV~a~~~~~ 310 (487)
.|++|+++++|++|..+++++.|++. +|+ ++.+|.||+|++...
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 58999999999999998888877775 665 389999999999753
No 242
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.19 E-value=0.00016 Score=74.62 Aligned_cols=37 Identities=27% Similarity=0.480 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
...+|+||||||.+|+++|.+|++ |.+|+|+|+....
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse------g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE------KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT------TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc------CCcEEEEecCCCc
Confidence 345899999999999999999996 6799999997654
No 243
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.0022 Score=64.81 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=32.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+++|||+|..|+-.|..|++ .|.+|+++|+.++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~-----~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHG-----LGVKTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCeEEEEEcCCc
Confidence 5689999999999999999999 9999999999764
No 244
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.15 E-value=0.002 Score=61.64 Aligned_cols=35 Identities=23% Similarity=0.504 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~-----~g~~v~~v~~~~~ 207 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTK-----YGSKVFMLVRKDH 207 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT-----TSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----cCCEEEEEEcCCc
Confidence 4679999999999999999999 9999999998654
No 245
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.14 E-value=0.0022 Score=66.96 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+++|+.+++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRE-----RGIEVTLVEMANQV 222 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCeEEEEecCCcc
Confidence 4689999999999999999999 99999999987653
No 246
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.13 E-value=0.0002 Score=73.96 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=33.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCC-CCeEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNW-HPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~-G~~V~VlE~~~~ 60 (487)
+.+|+||||||++|+++|++|++ . |.+|+|+|+...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~-----~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSE-----DPAVSVALVEAGPD 48 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTT-----STTSCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-----CCCCCEEEEecCCc
Confidence 46899999999999999999999 7 899999999865
No 247
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.11 E-value=0.0046 Score=63.47 Aligned_cols=33 Identities=12% Similarity=0.147 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
+.+++|||||..|+=.|..+++ .|.+|+|+++.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~-----lG~~VTii~~~ 255 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNS-----LGYDVTVAVRS 255 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----HTCCEEEEESS
T ss_pred CceEEEECCCHHHHHHHHHHHh-----cCCeEEEeccc
Confidence 4689999999999999999999 99999999874
No 248
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.11 E-value=0.00018 Score=74.47 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
.+|+||||||.+|+++|.+|++. .|.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~----~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED----PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS----TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC----cCCcEEEEecCCcc
Confidence 47999999999999999999972 58999999997643
No 249
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.01 E-value=0.0033 Score=59.72 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=31.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~-----~g~~Vtlv~~~~~ 179 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSN-----IASEVHLIHRRDG 179 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT-----TSSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----cCCeEEEEEeCCc
Confidence 4689999999999999999999 9999999998653
No 250
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.94 E-value=0.0079 Score=60.70 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+++|+.+++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRL-----MGVQTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCEEEEEEeCCcC
Confidence 4689999999999999999999 99999999997653
No 251
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.86 E-value=0.00061 Score=70.97 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=32.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+||||||.+|+++|.+|++. .|.+|+|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~----~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN----PKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS----TTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC----CCCcEEEEecCCc
Confidence 458999999999999999999982 5899999999754
No 252
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.72 E-value=0.0065 Score=58.88 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=35.2
Q ss_pred hcCCeEEeCCceEEEEEeCCEE-EEEE--ccC--ceEecCEEEEccCCC
Q 043512 266 RSDVALHLHEEIESISYLREYY-ELNS--TKG--NSYTCQITVVATPLD 309 (487)
Q Consensus 266 ~~G~~i~~~~~V~~I~~~~~~v-~V~~--~~G--~~~~ad~VV~a~~~~ 309 (487)
+.|++|+++++|++|..+++++ .|.+ .+| +++.+|.||++++..
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred cCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 4578999999999999887754 5554 367 579999999999864
No 253
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.65 E-value=0.013 Score=59.48 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..+++|||||..|+-.|..|++ .|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKG-----LGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----cCCEEEEEeCC
Confidence 4689999999999999999999 99999999874
No 254
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.49 E-value=0.0031 Score=53.21 Aligned_cols=40 Identities=20% Similarity=0.298 Sum_probs=33.1
Q ss_pred CCCCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 15 QPTFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 15 ~~~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
|+......+|+|||+|..|...|..|++ .|++|++++++.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~-----~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASS-----SGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence 4445556789999999999999999999 999999999864
No 255
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.34 E-value=0.0056 Score=50.59 Aligned_cols=37 Identities=19% Similarity=0.173 Sum_probs=33.5
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.....+|+|||+|-.|...|..|.+ .|++|+++|++.
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~-----~g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLA-----SDIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHH-----TTCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCCCEEEEECCH
Confidence 4456789999999999999999999 999999999975
No 256
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.06 E-value=0.0068 Score=49.70 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|+|||+|..|...|..|++ .|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence 4689999999999999999999 999999999864
No 257
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.03 E-value=0.0045 Score=60.83 Aligned_cols=36 Identities=22% Similarity=0.085 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~-----~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIID-----SGTPASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHH-----HTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCeEEEEEcCCcc
Confidence 3679999999999999999999 99999999998764
No 258
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.02 E-value=0.0052 Score=58.24 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=32.0
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
++|+|||||..|+-+|..|++ .|.+|+|+|+.++
T Consensus 146 k~vvViGgG~ig~E~A~~l~~-----~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTK-----FADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----TCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-----cCCEEEEEecccc
Confidence 689999999999999999999 9999999999765
No 259
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.80 E-value=0.0091 Score=47.23 Aligned_cols=35 Identities=17% Similarity=0.356 Sum_probs=31.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCC-CeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWH-PRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G-~~V~VlE~~~ 59 (487)
+.++|+|+|+|..|...|..|.+ .| ++|++++++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-----~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-----SSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-----CSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-----CCCceEEEEeCCH
Confidence 34689999999999999999999 99 9999999864
No 260
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.79 E-value=0.011 Score=48.77 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|+|+|+|-.|...|..|.+ .|++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~-----~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA-----AGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----CCCeEEEEECCH
Confidence 4679999999999999999999 999999999864
No 261
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.76 E-value=0.0074 Score=60.77 Aligned_cols=36 Identities=17% Similarity=0.301 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRK-----LGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----HTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CCCeEEEEEcCCcc
Confidence 4689999999999999999999 99999999998653
No 262
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.55 E-value=0.011 Score=57.64 Aligned_cols=36 Identities=25% Similarity=0.258 Sum_probs=33.5
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcc
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVG 62 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~G 62 (487)
.+|+|||||..|+-+|..|++ .|.+|+++|+.+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~~~~l 179 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE-----AGYHVKLIHRGAMFL 179 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH-----TTCEEEEECSSSCCT
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCCEEEEEeCCCeec
Confidence 689999999999999999999 999999999988754
No 263
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.50 E-value=0.012 Score=55.77 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=31.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...+|+|||||..|..-|..++. .|++|+++|.+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~-----~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS-----GGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence 34679999999999999999999 999999999764
No 264
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.28 E-value=0.014 Score=55.09 Aligned_cols=34 Identities=15% Similarity=0.409 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~-----~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTK-----YGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT-----TSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHH-----hCCeeeeecccc
Confidence 4689999999999999999999 999999999754
No 265
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.26 E-value=0.023 Score=47.57 Aligned_cols=34 Identities=12% Similarity=0.052 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+|+|+|+|-.|...|..|.+ .|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~-----~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ-----RGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-----TTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCCCEEEEECCC
Confidence 4579999999999999999999 999999999963
No 266
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.24 E-value=0.018 Score=54.96 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|+|||+|..|.+.|..|++ .|++|+++.++.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~-----~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAK-----TGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHH-----TTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHh-----CCCeEEEEeCCh
Confidence 4689999999999999999999 999999999864
No 267
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.18 E-value=0.021 Score=49.45 Aligned_cols=34 Identities=26% Similarity=0.186 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC-CCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW-HPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~-G~~V~VlE~~~ 59 (487)
..+|+|||+|..|...|..|.+ . |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~-----~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA-----RYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH-----HHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHh-----ccCCeEEEEECCH
Confidence 4589999999999999999999 9 99999999864
No 268
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.07 E-value=0.018 Score=54.67 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|+|||+|..|.+.|..|++ .|++|+++.++.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~-----~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQR-----SGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHH-----TSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHH-----CCCeEEEEEcCc
Confidence 4689999999999999999999 999999999864
No 269
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.01 E-value=0.023 Score=46.68 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+|+|+|+|..|...|..|.+ .|++|++++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~-----~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR-----MGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 3579999999999999999999 999999999853
No 270
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.98 E-value=0.027 Score=53.12 Aligned_cols=34 Identities=18% Similarity=0.376 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~-----~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA-----TGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence 3579999999999999999999 999999999863
No 271
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.96 E-value=0.023 Score=56.98 Aligned_cols=35 Identities=14% Similarity=0.254 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||.|.+|+++|..|++ .|++|++.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~-----~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK-----LGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh-----CCCEEEEEeCCc
Confidence 35789999999999999999999 999999999865
No 272
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.94 E-value=0.061 Score=54.53 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=35.7
Q ss_pred CCCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcc
Q 043512 16 PTFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVG 62 (487)
Q Consensus 16 ~~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~G 62 (487)
+..+..+||+|||||++|++||..|++.. .|.+|+|+|+++.++
T Consensus 6 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~~---~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 6 DKAPSHVPFLLIGGGTAAFAAARSIRARD---PGARVLIVSEDPELP 49 (493)
T ss_dssp --CCSEEEEEEESCSHHHHHHHHHHHHHS---TTCEEEEEESSSSCC
T ss_pred CCCCCcCCEEEECChHHHHHHHHHHHhcC---CCCeEEEEeCCCCCC
Confidence 34455689999999999999999998832 489999999987654
No 273
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.76 E-value=0.03 Score=49.97 Aligned_cols=35 Identities=34% Similarity=0.316 Sum_probs=30.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~-----~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVG-----SGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH-----TTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 45789999999999999999999 999999999863
No 274
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.70 E-value=0.033 Score=55.79 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++|+.+++
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAA-----QGKNVTMIVRGERV 183 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCeEEEEEcCCcc
Confidence 3589999999999999999999 99999999998753
No 275
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.67 E-value=0.03 Score=53.20 Aligned_cols=36 Identities=25% Similarity=0.306 Sum_probs=31.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNG 59 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~ 59 (487)
...++|+|||+|..|.+.|..|++ .|+ +|++++++.
T Consensus 5 ~~~mkI~IiGaG~vG~~~a~~l~~-----~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 5 VKPTKLAVIGAGAVGSTLAFAAAQ-----RGIAREIVLEDIAK 42 (319)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTCCSEEEEECSSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCCCCEEEEEeCCh
Confidence 345789999999999999999999 998 999999863
No 276
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.66 E-value=0.03 Score=52.29 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|+|||+|..|.+.|..|++ .|++|++++++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~-----~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAF-----HGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCeEEEEeCCH
Confidence 3679999999999999999999 999999999864
No 277
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.61 E-value=0.033 Score=52.57 Aligned_cols=36 Identities=19% Similarity=0.025 Sum_probs=31.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.+.++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 5 ~~~~~I~iIG~G~mG~~~a~~l~~-----~G~~V~~~dr~~ 40 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMGMGAARSCLR-----AGLSTWGADLNP 40 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH-----CCCeEEEEECCH
Confidence 345789999999999999999999 999999999864
No 278
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.59 E-value=0.029 Score=56.01 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||||..|+-.|..|++ .|.+|+|+|+.+++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~-----~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYE-----RGLHPTLIHRSDKI 182 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HTCEEEEEESSSCC
T ss_pred CcEEEEECCccchhhhHHHHHh-----cCCcceeeeeeccc
Confidence 4589999999999999999999 99999999998775
No 279
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.57 E-value=0.031 Score=53.13 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ +|++|++++++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~-----~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS-----GGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 4679999999999999999999 999999999864
No 280
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.55 E-value=0.028 Score=50.13 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|+|||+|-.|...|..|.+ .|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~-----~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS-----RKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH-----TTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence 469999999999999999999 999999999864
No 281
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.53 E-value=0.04 Score=48.85 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=31.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..++|.|||+|..|.+.|..|++ .|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~-----~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEI-----AGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH-----TTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCCEEEEEcCCHH
Confidence 35689999999999999999999 9999999998754
No 282
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.51 E-value=0.033 Score=53.87 Aligned_cols=44 Identities=18% Similarity=0.384 Sum_probs=36.4
Q ss_pred hcC-CeEEeCCceEEEEEeCCEEEEEEccCceEe-cCEEEEccCCC
Q 043512 266 RSD-VALHLHEEIESISYLREYYELNSTKGNSYT-CQITVVATPLD 309 (487)
Q Consensus 266 ~~G-~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~-ad~VV~a~~~~ 309 (487)
+.| ++++++++|++|..+++.+.|++.+|+.+. +|.||++++..
T Consensus 226 ~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 226 QGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp TTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBC
T ss_pred hCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccC
Confidence 455 899999999999877777788888887665 59999998874
No 283
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.43 E-value=0.022 Score=53.50 Aligned_cols=34 Identities=32% Similarity=0.473 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|+|||+|..|.+.|..|++ .|++|+++.|+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~-----~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQ-----SLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----HCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHH-----CCCeEEEEEecc
Confidence 4689999999999999999999 999999999863
No 284
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.41 E-value=0.026 Score=56.32 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
.++|.|||.|.+|+++|..|++ +|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~-----~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLA-----RGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHT-----TTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHh-----CCCEEEEEECCCCc
Confidence 4679999999999999999999 99999999987654
No 285
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.41 E-value=0.049 Score=54.27 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.++|.|||+|..|.+.|..|++ +|++|+++|++..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~-----aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGL-----AGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----CCCeEEEEECcHH
Confidence 3679999999999999999999 9999999998754
No 286
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.39 E-value=0.039 Score=51.91 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++++.++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~-----~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLAN-----ICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHT-----TSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----cCCEEEEEeeCCc
Confidence 4689999999999999999999 9999999998764
No 287
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.34 E-value=0.039 Score=55.18 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=31.2
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|+..|..|++ .|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~-----~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE-----LGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHh-----cCCEEEEEECCH
Confidence 689999999999999999999 999999999864
No 288
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.31 E-value=0.043 Score=51.17 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=30.6
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~-----~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCK-----QGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHh-----CCCCEEEEEcCc
Confidence 369999999999999999999 999999999865
No 289
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.21 E-value=0.041 Score=51.72 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++++.++
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~-----~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAG-----IVEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-----TBSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----hCCEEEEEEeCcc
Confidence 3679999999999999999999 9999999998765
No 290
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.20 E-value=0.049 Score=53.15 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+|+|||+|..|+.+|..|.. .|.+|+++|++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~-----lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR-----LGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHH-----CCCEEEEEcCCH
Confidence 4689999999999999999999 999999999875
No 291
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.20 E-value=0.043 Score=55.34 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.+++|+|||+|..|+..|..|++ .|++|++++++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~-----~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLAD-----IGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence 46789999999999999999999 999999999853
No 292
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.20 E-value=0.049 Score=52.08 Aligned_cols=34 Identities=18% Similarity=0.374 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
.++|+|||||-.|.+.|..|++ .|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~-----~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCAL-----RELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCCeEEEEECCh
Confidence 3689999999999999999999 898 999999864
No 293
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.15 E-value=0.045 Score=51.72 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-----~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ-----GGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHh-----CCCcEEEEECCH
Confidence 589999999999999999999 999999999853
No 294
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.15 E-value=0.046 Score=52.37 Aligned_cols=35 Identities=20% Similarity=0.455 Sum_probs=31.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
.++++|.|||+|..|.+.|..|++ .|++|++++++
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~-----~G~~V~~~~r~ 46 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHE-----NGEEVILWARR 46 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHh-----CCCeEEEEeCC
Confidence 356889999999999999999999 99999999885
No 295
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.10 E-value=0.051 Score=53.69 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=34.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVG 62 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~G 62 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++|+.+++-
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK-----FGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----cCCeEEEEecCCchh
Confidence 5789999999999999999999 999999999988753
No 296
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.09 E-value=0.066 Score=50.53 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=33.6
Q ss_pred CCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 17 TFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 17 ~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.....++|.|||.|..|.+.|..|++ .|++|++++++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~-----~G~~V~~~dr~~ 42 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLK-----QGKRVAIWNRSP 42 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSH
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 34456789999999999999999999 999999999864
No 297
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.08 E-value=0.05 Score=53.56 Aligned_cols=37 Identities=24% Similarity=0.204 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVG 62 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~G 62 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++|+.+++.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~-----~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARA-----KGLEVDVVELAPRVM 178 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCEEEEEeCCCcch
Confidence 4679999999999999999999 999999999987653
No 298
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.07 E-value=0.04 Score=56.57 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.++|+|||+|..|+-+|..|++ .|.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~-----~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAP-----EVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT-----TCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHh-----hCCEEEEEECCCC
Confidence 4689999999999999999999 9999999999875
No 299
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.02 E-value=0.051 Score=52.06 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
.++|+|||+|..|.+.|..|++ .|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~-----~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLAL-----AGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHH-----TTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHH-----CCCEEEEEECh
Confidence 3689999999999999999999 99999999874
No 300
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.96 E-value=0.054 Score=54.37 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=32.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCC-CC-eEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNW-HP-RILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~-G~-~V~VlE~~~~ 60 (487)
+.++|+|||+|..|+..|..|++ . |+ +|++++++..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~-----~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFAD-----APCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHH-----STTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHH-----hCCCCeEEEEECChh
Confidence 34689999999999999999999 9 99 9999998754
No 301
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.95 E-value=0.062 Score=50.86 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=33.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
...++|.|||.|..|.+.|..|++ .|++|++++++..
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~-----~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLK-----NGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHH-----CCCeEEEEeCCHH
Confidence 345789999999999999999999 9999999998753
No 302
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.91 E-value=0.062 Score=48.91 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~-----~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALAD-----LGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-----CCCEEEEEeCCh
Confidence 45789999999999999999999 999999999864
No 303
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.89 E-value=0.051 Score=54.64 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
.++|+|||+|.+|+-.|..|++ .|.+|+++++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~-----~g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYK-----YGAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHH-----TTCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHH-----hCCeEEEEEECCCC
Confidence 4689999999999999999999 99999999998664
No 304
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.88 E-value=0.069 Score=53.59 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|...|..|++ +|++|+++|++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~-----~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR-----VGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence 4579999999999999999999 999999999864
No 305
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.84 E-value=0.049 Score=51.81 Aligned_cols=36 Identities=19% Similarity=0.469 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~-----~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTK-----YGSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT-----TSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHh-----cCCeEEEEecCCcC
Confidence 4689999999999999999999 99999999998653
No 306
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.82 E-value=0.044 Score=56.33 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=33.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..++|+|||+|.+|+-+|..|++ .+.+|+|+++.++
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~-----~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAE-----TAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTT-----TBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHh-----hCCEEEEEEcCCC
Confidence 35789999999999999999999 9999999999875
No 307
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.76 E-value=0.06 Score=51.99 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~-----~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR-----KGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT-----TTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHH-----CCCeEEEEeCCH
Confidence 4689999999999999999999 999999999863
No 308
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.74 E-value=0.061 Score=54.26 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=32.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||||..|+-+|..|++ .|.+|+++++.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSA-----LGSKTSLMIRHDK 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHH-----cCCeEEEEEeCCc
Confidence 4689999999999999999999 9999999998764
No 309
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.73 E-value=0.069 Score=50.96 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
+.++|+|||||..|.+.|..|++ .|+ +|+++|.+.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~-----~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQ-----KDLGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTCCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCCCeEEEEECCH
Confidence 44689999999999999999999 998 999999864
No 310
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.73 E-value=0.06 Score=51.13 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=29.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|+|||+|..|.+.|..|++ .|++|+++ ++.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~-----~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR-----AGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH-----TTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHH-----CCCeEEEE-EcH
Confidence 45789999999999999999999 99999999 653
No 311
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.72 E-value=0.066 Score=50.94 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...++|.|||.|..|...|..|++ .|++|++++++.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~-----~G~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCE-----AGYALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHh-----CCCeEEEEcCCH
Confidence 345689999999999999999999 999999999864
No 312
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.72 E-value=0.055 Score=51.61 Aligned_cols=35 Identities=20% Similarity=0.423 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-.|..|++ .|.+|+++++.++
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~-----~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTR-----FARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT-----TCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----hCCeEEEEEcCCc
Confidence 4789999999999999999999 9999999998764
No 313
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.67 E-value=0.057 Score=51.20 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~-----~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTK-----FADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTT-----TCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----cCCEEEEEeCCCc
Confidence 3679999999999999999999 9999999998764
No 314
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.66 E-value=0.048 Score=56.10 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.++|+|||+|..|+-+|..|++ .|.+|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~-----~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAE-----QAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-----HBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHh-----hCCEEEEEECCCC
Confidence 5689999999999999999999 8999999999875
No 315
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.59 E-value=0.06 Score=48.09 Aligned_cols=35 Identities=14% Similarity=0.091 Sum_probs=31.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+.|+|||||-.|...|..|.+ .|.+|+|++...
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~-----~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ-----EGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG-----GCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCCEEEEECCCC
Confidence 35789999999999999999999 999999998753
No 316
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.58 E-value=0.058 Score=52.16 Aligned_cols=35 Identities=9% Similarity=0.244 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...+|+|||+|..|+.+|..|.. .|.+|++++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~-----lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKR-----LGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHH-----HTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 35689999999999999999999 899999999864
No 317
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.56 E-value=0.078 Score=50.57 Aligned_cols=34 Identities=18% Similarity=0.042 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHH-HHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSS-LAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLs-aA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||.|-+|++ +|..|++ +|++|++.|++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~-----~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKE-----AGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHh-----CCCEEEEEcCCC
Confidence 468999999999997 7888889 999999999875
No 318
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.53 E-value=0.075 Score=50.88 Aligned_cols=39 Identities=28% Similarity=0.427 Sum_probs=32.9
Q ss_pred CCCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 16 PTFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 16 ~~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...+..++|.|||.|..|.+.|..|++ .|++|++++++.
T Consensus 3 ~~~~~~~kIgIIG~G~mG~slA~~L~~-----~G~~V~~~dr~~ 41 (341)
T 3ktd_A 3 TTKDISRPVCILGLGLIGGSLLRDLHA-----ANHSVFGYNRSR 41 (341)
T ss_dssp ---CCSSCEEEECCSHHHHHHHHHHHH-----TTCCEEEECSCH
T ss_pred CccCCCCEEEEEeecHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 334456789999999999999999999 999999999874
No 319
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.47 E-value=0.046 Score=50.44 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..+.|+|||||-.|+..|..|.+ .|.+|+|++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~-----~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMP-----TGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGG-----GTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHh-----CCCEEEEEcCC
Confidence 35789999999999999999999 99999999875
No 320
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.44 E-value=0.076 Score=49.55 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=31.4
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
++|.|||+|..|.+.|..|++ .|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~-----~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK-----AGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHH-----CCCeEEEEcCCHH
Confidence 579999999999999999999 9999999998753
No 321
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.35 E-value=0.075 Score=50.45 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
.++|+|||+|..|.+.|..|++ .|+ +|++++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~-----~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGK-----DNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCceEEEEeCCc
Confidence 4689999999999999999999 898 999999864
No 322
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.35 E-value=0.082 Score=52.64 Aligned_cols=36 Identities=11% Similarity=0.304 Sum_probs=32.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.+.+++|||.|..|+..|..|++ .|++|++++++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~-----~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSD-----FGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHH-----CCCEEEEEeCCHH
Confidence 35689999999999999999999 9999999998753
No 323
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=93.35 E-value=0.13 Score=52.21 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCcc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVG 62 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~G 62 (487)
.+||+|||||++|+++|+.|++ +|++|+|+||++..+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~~V~llE~~~~~~ 39 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGLSVLMLEAQDLAC 39 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCCCEEEEECCCCCC
Confidence 5799999999999999999999 999999999987443
No 324
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.28 E-value=0.06 Score=51.22 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++++.++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~-----~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLD-----TARRITLIHRRPQ 186 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTT-----TSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----hCCEEEEEEcCCc
Confidence 4689999999999999999999 9999999998754
No 325
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.27 E-value=0.037 Score=49.69 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
++.++|.|||+|..|.+.|..|++ +|++|+++++.
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~-----~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDS-----VGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHH-----TTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHH-----CCCEEEEecCH
Confidence 345689999999999999999999 99999999874
No 326
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.20 E-value=0.064 Score=50.37 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.++|.|||.|..|...|..|++ .|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-----~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-----WPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-----STTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CCCeEEEEeCCHH
Confidence 4689999999999999999999 9999999998753
No 327
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.15 E-value=0.071 Score=53.26 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCe-EEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPR-ILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~-V~VlE~~~~ 60 (487)
.++|+|||+|.+|+=.|..|++ .|.+ |+++++.+.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~-----~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTP-----VAKHPIYQSLLGGG 247 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTT-----TSCSSEEEECTTCC
T ss_pred CCEEEEEccCcCHHHHHHHHHH-----HhCCcEEEEeCCCC
Confidence 4689999999999999999999 8999 999999764
No 328
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.14 E-value=0.077 Score=51.24 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
...+|+|+|||.+|+.+|..|.. .|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~-----~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLA-----AGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH-----HTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHH-----cCCCeEEEEECCC
Confidence 45689999999999999999999 898 999999973
No 329
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.14 E-value=0.087 Score=50.79 Aligned_cols=32 Identities=25% Similarity=0.494 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
++|+|||+|..|...|..|++ .|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCCEEEEEeCC
Confidence 689999999999999999999 99999999885
No 330
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.10 E-value=0.039 Score=45.58 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+|+|||+|..|.+.|..|++ .|.+|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~-----~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY-----PQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT-----TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCEEEEEcCCH
Confidence 5789999999999999999999 999999999864
No 331
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.06 E-value=0.084 Score=50.11 Aligned_cols=35 Identities=23% Similarity=0.250 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCC-CeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWH-PRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G-~~V~VlE~~~ 59 (487)
+.++|.|||+|..|.+.|..|++ .| ++|++++++.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~-----~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGG-----RNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHH-----cCCCeEEEEeCCC
Confidence 45789999999999999999999 99 9999999874
No 332
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.04 E-value=0.072 Score=50.35 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=31.4
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.+|+|||+|..|+-.|..|++ .|.+|+++++.++
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~-----~g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSE-----YVKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTT-----TBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----hCCcEEEEEcCCc
Confidence 579999999999999999999 9999999998754
No 333
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.02 E-value=0.092 Score=52.88 Aligned_cols=34 Identities=26% Similarity=0.489 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ +|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~-----aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAAS-----HGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHH-----CCCeEEEEECCH
Confidence 3579999999999999999999 999999999865
No 334
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.01 E-value=0.092 Score=49.49 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=30.1
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~ 59 (487)
++|+|||||..|.+.|..|+. .|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~-----~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL-----RGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCCCEEEEEeCCH
Confidence 479999999999999999999 998 999999863
No 335
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.00 E-value=0.091 Score=49.41 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~-----~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLK-----AGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHh-----CCCeEEEEcCCH
Confidence 4689999999999999999999 999999998864
No 336
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.93 E-value=0.085 Score=52.53 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|+|||+|..|+..|..|++ .|++|++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~-----~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSA-----RGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence 369999999999999999999 999999999853
No 337
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.83 E-value=0.092 Score=50.64 Aligned_cols=34 Identities=24% Similarity=0.453 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
...+|+|+|||.+|..+|..|.. .|. +|+|++++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~-----~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLD-----LGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----HTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHh-----CCCCeEEEEECC
Confidence 45789999999999999999999 887 89999997
No 338
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.82 E-value=0.047 Score=54.79 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=32.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|+|+|+|-.|.+.|..|.+ .|++|+|+|++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~-----~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVG-----ENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCS-----TTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHH-----CCCCEEEEECCH
Confidence 45789999999999999999999 999999999974
No 339
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.76 E-value=0.062 Score=50.85 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=29.3
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCC-----C-CeEEEEec
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNW-----H-PRILMFER 57 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~-----G-~~V~VlE~ 57 (487)
++|.|||+|..|.+.|..|++ . | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~-----~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLAL-----RAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----HHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CccccCCCCCEEEEEc
Confidence 589999999999999999999 8 9 99999987
No 340
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.68 E-value=0.083 Score=49.28 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=31.3
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
++|.|||.|..|.+.|..|++ .|++|++++++..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~-----~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR-----AGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH-----HTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHH-----CCCeEEEEcCCHH
Confidence 479999999999999999999 9999999998753
No 341
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.68 E-value=0.13 Score=48.85 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
.++|+|||||-.|.+.|..|+. .|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~-----~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQ-----KNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCCeEEEEeCCH
Confidence 4689999999999999999999 898 999999754
No 342
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=92.66 E-value=0.047 Score=53.79 Aligned_cols=38 Identities=29% Similarity=0.510 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC--CCeEEEEecCCCccc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW--HPRILMFERNGVVGG 63 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~--G~~V~VlE~~~~~GG 63 (487)
.+||+|||||++|+++|+.|++ + |++|+|+|+++..+|
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~-----~~pG~~V~vlE~~~~~~~ 75 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQ-----LAPGRSLLLVEEGGLPNE 75 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----HCTTSCEEEECSSCSSCT
T ss_pred cCCEEEECCcHHHHHHHHHHHh-----cCCCCeEEEEeCCCCCCc
Confidence 3799999999999999999999 8 999999999865443
No 343
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.63 E-value=0.086 Score=50.29 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=29.3
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEec
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFER 57 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~ 57 (487)
++|.|||+|..|.+.|..|++ .|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~-----~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVD-----NGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHH-----HCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCCeEEEEEc
Confidence 369999999999999999999 9999999998
No 344
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.60 E-value=0.12 Score=48.96 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=29.9
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|+|||+|..|.+.|..|++.. .|++|+++|++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~---~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQ---LARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCEEEEEeCCh
Confidence 37999999999999999999821 278999999864
No 345
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=92.60 E-value=0.1 Score=54.24 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~-----~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLAS-----LGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----cCCEEEEEECC
Confidence 3579999999999999999999 99999999975
No 346
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.56 E-value=0.12 Score=51.17 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=32.7
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...+.+|+|||.|..||.+|..|++ .|++|+.+|-+.
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~-----~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFAL-----LGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHH-----HTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHh-----CCCcEEEEECCH
Confidence 3456789999999999999999999 999999998753
No 347
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.55 E-value=0.1 Score=52.48 Aligned_cols=36 Identities=19% Similarity=0.211 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC-CCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW-HPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~-G~~V~VlE~~~~~ 61 (487)
..+|+|||+|..|+-+|..|++ . |.+|+++|+.+++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~-----~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLAD-----MWGIDTTVVELADQI 195 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----HHCCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----hcCCcEEEEEccCcc
Confidence 4689999999999999999999 8 9999999998764
No 348
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.55 E-value=0.12 Score=50.64 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+|+|||+|..|+.+|..|+. .|.+|++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~-----~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANS-----LGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----CCCEEEEEcCCH
Confidence 5689999999999999999999 999999999864
No 349
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.54 E-value=0.14 Score=48.46 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=31.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~ 59 (487)
+.++|.|||+|..|.+.|..|++ .|+ +|++++++.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~-----~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRR-----SGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHH-----TTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh-----CCCCCEEEEEECCH
Confidence 34789999999999999999999 999 999999864
No 350
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.53 E-value=0.087 Score=53.81 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++|+.++
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~-----~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAG-----IVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-----HBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----hCCEEEEEEeCcc
Confidence 4689999999999999999999 8999999998765
No 351
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.44 E-value=0.077 Score=51.47 Aligned_cols=32 Identities=25% Similarity=0.383 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 23 TVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 23 dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~-----~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK-----KCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT-----TEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence 89999999999999999999 999999998753
No 352
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.43 E-value=0.14 Score=48.17 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=31.7
Q ss_pred CCCcEEEEC-CChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIG-SGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIG-aGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+.++|.||| +|..|.+.|..|++ .|++|++++++.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~-----~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRA-----SGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHT-----TTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHh-----CCCeEEEEECCc
Confidence 345899999 99999999999999 999999999864
No 353
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=92.42 E-value=0.1 Score=48.92 Aligned_cols=36 Identities=17% Similarity=0.346 Sum_probs=29.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++.+|.+||-|..|...|..|.+ +|++|++++++.
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~-----~G~~V~v~dr~~ 38 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLE-----AGYELVVWNRTA 38 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHH-----TTCEEEEC----
T ss_pred CCCCcEEEEecHHHHHHHHHHHHH-----CCCeEEEEeCCH
Confidence 345689999999999999999999 999999999864
No 354
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.37 E-value=0.13 Score=49.59 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||.|..|...|..|++ .|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~-----~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK-----GGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHh-----CCCEEEEEeCCH
Confidence 4689999999999999999999 999999999864
No 355
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.34 E-value=0.14 Score=48.37 Aligned_cols=34 Identities=29% Similarity=0.486 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
.++|+|||||-.|.+.|+.|+. .|+ +|+++|.+.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~-----~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAA-----KELGDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----CCCCeEEEEeCCc
Confidence 3689999999999999999999 886 999999753
No 356
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.33 E-value=0.15 Score=51.14 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~~ 60 (487)
..++|+|||||..|+-+|..+.+ .|. +|++++++++
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r-----~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIR-----QGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHH-----TTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHH-----cCCCEEEEEEeCCc
Confidence 45789999999999999999999 887 5999998764
No 357
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.30 E-value=0.14 Score=49.93 Aligned_cols=35 Identities=11% Similarity=0.236 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...+|+|||+|..|+.+|..++. .|.+|++++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~-----~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKR-----LGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 35789999999999999999999 999999999864
No 358
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.24 E-value=0.14 Score=50.55 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...+|+|||.|-.|...|..|.+ .|++|+|+|++.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~-----~g~~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS-----SGVKMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TTCCEEEEECCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-----CCCCEEEEECCH
Confidence 34679999999999999999999 999999999874
No 359
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.22 E-value=0.16 Score=47.33 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=31.3
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+ |..|.+.|..|++ .|++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~-----~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHD-----SAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-----SSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence 468999999 9999999999999 999999999864
No 360
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.22 E-value=0.14 Score=45.18 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=30.0
Q ss_pred CcEEEEC-CChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIG-SGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIG-aGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|+||| +|..|.+.|..|++ .|++|++++++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~-----~g~~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLAT-----LGHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 3699999 99999999999999 999999998863
No 361
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.22 E-value=0.11 Score=49.28 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=30.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
..++|.|||.|..|.+.|..|++ .|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~-----~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQ-----AGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH-----HSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHH-----CCCCeEEEEcCC
Confidence 35689999999999999999999 999 99999986
No 362
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.21 E-value=0.15 Score=51.56 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..+|+|||||..|+-.|..|++ .|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~-----~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTG-----IGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----cCCceEEEEcC
Confidence 4579999999999999999999 99999999975
No 363
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.17 E-value=0.13 Score=48.15 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|.|||+|..|...|..|++ .|++|++++++.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~-----~g~~V~~~~~~~ 38 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLK-----AGYSLVVSDRNP 38 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred cceEEEECchHHHHHHHHHHHh-----CCCEEEEEeCCH
Confidence 3689999999999999999999 999999998864
No 364
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.14 E-value=0.083 Score=47.18 Aligned_cols=34 Identities=29% Similarity=0.308 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEE-EecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILM-FERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~V-lE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ .|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~-----~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA-----AQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH-----TTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCEEEEEECCCH
Confidence 4689999999999999999999 9999999 88764
No 365
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=92.08 E-value=0.16 Score=51.88 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..+|+|||||..|+-.|..|++ .|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~-----~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAG-----IGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHH-----cCCeEEEEecc
Confidence 3579999999999999999999 99999999974
No 366
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.04 E-value=0.19 Score=47.65 Aligned_cols=35 Identities=9% Similarity=0.041 Sum_probs=31.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~ 59 (487)
...+|+|||+|..|.+.|+.|+. .|. +|+++|.+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~-----~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLM-----KDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHH-----HCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCCCCeEEEEECCH
Confidence 45789999999999999999999 887 899999753
No 367
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.03 E-value=0.15 Score=48.21 Aligned_cols=33 Identities=24% Similarity=0.450 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
.++|+|||+|..|.+.|+.|++ .|+ +|+++|.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~-----~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQ-----KELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCCeEEEEecc
Confidence 4689999999999999999999 999 99999986
No 368
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.02 E-value=0.28 Score=45.80 Aligned_cols=41 Identities=29% Similarity=0.499 Sum_probs=37.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEE-EecCCCccceeE
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILM-FERNGVVGGRMA 66 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~V-lE~~~~~GGr~~ 66 (487)
.++||+|||||++|++||+.|++ .|++|+| +|+ +.+||.+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~~v~li~e~-~~~gG~~~ 44 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR-----GGLKNVVMFEK-GMPGGQIT 44 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH-----HTCSCEEEECS-SSTTGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CCCCeEEEEeC-CCCCceee
Confidence 46799999999999999999999 9999999 999 67888754
No 369
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.00 E-value=0.17 Score=49.01 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.+|+|+|+|..|+.+|..|+. .|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~-----~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVG-----LGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCEEEEEeCCH
Confidence 789999999999999999999 999999999864
No 370
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.93 E-value=0.17 Score=46.73 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
.+.|+|+|+|-.|.++|..|++ .|.+|+|+.|+
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~-----~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLS-----LDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHH-----cCCEEEEEECC
Confidence 4689999999999999999999 99999999876
No 371
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.88 E-value=0.16 Score=53.90 Aligned_cols=34 Identities=32% Similarity=0.367 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|...|..|++ +|++|+++|++.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~-----aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALIL-----SNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHh-----CCCEEEEEECCH
Confidence 3579999999999999999999 999999999864
No 372
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.88 E-value=0.17 Score=45.98 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC----eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP----RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~----~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|.+ .|+ +|++++++.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~-----~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMIN-----KNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TTSSCGGGEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHh-----CCCCCCCeEEEEeCCH
Confidence 3679999999999999999999 998 999999864
No 373
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.87 E-value=0.16 Score=51.26 Aligned_cols=36 Identities=17% Similarity=0.420 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||+|..|+-.|..|++ .|.+|+++|+.+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~-----~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHG-----LGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHH-----cCCeEEEEECCCcc
Confidence 4689999999999999999999 99999999998764
No 374
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=91.87 E-value=0.16 Score=51.36 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.+..+|.|||+|..|.+.|..|++ +|++|++++++.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~-----~G~~V~v~dr~~ 43 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAAD-----HGFTVCAYNRTQ 43 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 356789999999999999999999 999999999864
No 375
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.85 E-value=0.15 Score=50.36 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=29.9
Q ss_pred CCCCCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 17 TFQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 17 ~~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.....++|+|||+|..|++.|..|++ |++|++++++.
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La~------G~~V~~~D~~~ 68 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIAQ------NHEVVALDIVQ 68 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHT------TSEEEEECSCH
T ss_pred cccCCCEEEEECcCHHHHHHHHHHHc------CCeEEEEecCH
Confidence 34445689999999999999998874 89999999864
No 376
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.84 E-value=0.12 Score=52.09 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=30.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC--CCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW--HPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~--G~~V~VlE~~ 58 (487)
.++|.|||+|..|+..|..|++ . |++|++++++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~-----~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAH-----KCPHITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH-----HCTTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----cCCCCEEEEEECC
Confidence 4689999999999999999999 7 7999999875
No 377
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.82 E-value=0.17 Score=46.93 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=30.1
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~-----~g~~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRR-----RGHYLIGVSRQQ 33 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence 369999999999999999999 999999998863
No 378
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.78 E-value=0.28 Score=49.66 Aligned_cols=40 Identities=35% Similarity=0.497 Sum_probs=36.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCccceeE
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVVGGRMA 66 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~GGr~~ 66 (487)
.+||+|||||++|++||+.|++ . ++|+|+|+++.+||...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~-----~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQ-----Y-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTT-----T-CCEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHh-----c-CCEEEEeCCCCCCCeee
Confidence 3589999999999999999999 9 99999999999998754
No 379
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.76 E-value=0.16 Score=50.87 Aligned_cols=36 Identities=25% Similarity=0.295 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHH--------------------HhcCCCCCC-eEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLR--------------------QYSSKNWHP-RILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~--------------------~~~~~~~G~-~V~VlE~~~~ 60 (487)
...+|+|||+|..|+-+|..|+ + .|. +|+|+++++.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~-----~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQ-----SRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHT-----CCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhh-----CCCcEEEEEEcCCh
Confidence 3578999999999999999999 5 677 7999998764
No 380
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.73 E-value=0.21 Score=47.26 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~-----~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLK-----MGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHh-----CCCEEEEEeCCH
Confidence 4689999999999999999999 999999999864
No 381
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.72 E-value=0.14 Score=51.46 Aligned_cols=34 Identities=21% Similarity=0.425 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC--CCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW--HPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~--G~~V~VlE~~~ 59 (487)
.++|.|||+|..|+..|..|++ . |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~-----~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAH-----MCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH-----HCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHh-----cCCCCEEEEEECCH
Confidence 3689999999999999999999 7 89999998853
No 382
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.66 E-value=0.14 Score=46.95 Aligned_cols=33 Identities=24% Similarity=0.245 Sum_probs=30.1
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCC-CeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWH-PRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G-~~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .| ++|++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~-----~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVK-----QGGYRIYIANRGA 34 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HCSCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHH-----CCCCeEEEECCCH
Confidence 369999999999999999999 99 9999999863
No 383
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.61 E-value=0.14 Score=48.66 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=29.6
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERN 58 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~ 58 (487)
++|+|||+|..|.+.|..|++ .|+ +|++++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~-----~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLM-----KGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCCCeEEEEeCC
Confidence 369999999999999999999 898 99999986
No 384
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.61 E-value=0.11 Score=50.58 Aligned_cols=35 Identities=20% Similarity=0.311 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCC-------CeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWH-------PRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G-------~~V~VlE~~~~ 60 (487)
.++|.|||+|..|.+.|..|++ .| ++|++++++..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~-----~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGT-----NAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHH-----HHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHH-----cCCccCCCCCeEEEEECChh
Confidence 3579999999999999999999 89 99999998653
No 385
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.59 E-value=0.19 Score=48.68 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...|+|+|+|..|+.+|..|+. .|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~-----~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALG-----MGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence 4789999999999999999999 999999999864
No 386
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.52 E-value=0.097 Score=51.52 Aligned_cols=30 Identities=20% Similarity=0.429 Sum_probs=28.0
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCC-CCeEEEEe
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNW-HPRILMFE 56 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~-G~~V~VlE 56 (487)
++|+|||+|..|.+.|..|++ . |++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~-----~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAAS-----RDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTT-----STTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHh-----CCCCEEEEEe
Confidence 579999999999999999987 6 99999998
No 387
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.52 E-value=0.17 Score=50.75 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||.|..|.+.|..|++ .|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~-----~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMND-----HGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 34689999999999999999999 999999999875
No 388
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.44 E-value=0.15 Score=47.18 Aligned_cols=35 Identities=26% Similarity=0.194 Sum_probs=31.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++++|+|+|||..|...+..|.+ +|++|+++.|+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~-----~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAP-----QGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGG-----GTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHH-----CCCEEEEEEcCh
Confidence 45789999999999999999999 999999998864
No 389
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=91.37 E-value=0.18 Score=47.09 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~-----~g~~V~~~~~~~ 33 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMK-----HGYPLIIYDVFP 33 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHH-----TTCCEEEECSST
T ss_pred CeEEEEeccHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 369999999999999999999 999999998864
No 390
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.36 E-value=0.23 Score=45.72 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|+|||+|-+|-++|+.|++ .|.+|+|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~-----~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKK-----QGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 6789999999999999999999 999999998864
No 391
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.35 E-value=0.22 Score=47.22 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
.++|+|||||..|.+.|+.|+. .|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~-----~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGL-----KELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCCeEEEEeCCc
Confidence 4589999999999999999999 888 999999864
No 392
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.33 E-value=0.16 Score=51.21 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|.|||+|..|.+.|..|++ +|++|++++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~-----~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIES-----RGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHT-----TTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHh-----CCCeEEEEeCCH
Confidence 4689999999999999999999 999999999863
No 393
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.27 E-value=0.16 Score=47.91 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=30.0
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCC--CeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWH--PRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G--~~V~VlE~~~ 59 (487)
++|+|||+|-.|.+.|..|++ .| .+|++++++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~-----~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA-----QGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCCCEEEEEcCCH
Confidence 579999999999999999999 88 7999999863
No 394
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.24 E-value=0.19 Score=47.79 Aligned_cols=34 Identities=21% Similarity=0.137 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCC----CeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWH----PRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G----~~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ .| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~-----~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTA-----AGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHH-----TTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----CCCCCcceEEEECCCc
Confidence 4579999999999999999999 99 8999999865
No 395
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.23 E-value=0.2 Score=46.91 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|...|..|++ .|++|++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~-----~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLK-----EGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHH-----CCCeEEEEeCCH
Confidence 4689999999999999999999 999999998853
No 396
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.23 E-value=0.22 Score=46.15 Aligned_cols=33 Identities=33% Similarity=0.434 Sum_probs=29.9
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .|+ +|++++++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCCcEEEEEeCCH
Confidence 479999999999999999999 998 999998753
No 397
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.15 E-value=0.23 Score=48.31 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=31.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...+|+|||+|..|+.+|..++. .|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~-----~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANG-----MGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCCEEEEEeCCH
Confidence 35789999999999999999999 999999999864
No 398
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.08 E-value=0.15 Score=46.95 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCe-EEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPR-ILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~-V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ .|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~-----~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR-----KGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH-----HTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHH-----CCCeEEEEEeCCH
Confidence 4689999999999999999999 8998 89998864
No 399
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.04 E-value=0.17 Score=47.72 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=31.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++ .|.+|+++++.++
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~-----~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEP-----IAKEVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT-----TBSEEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHh-----hCCeEEEEEecCc
Confidence 4679999999999999999999 9999999998754
No 400
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.04 E-value=0.2 Score=47.20 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=29.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|+|||+|..|.+.|..|++ |++|+++.++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~~------g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLSL------YHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT------TSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHhc------CCceEEEECCH
Confidence 4789999999999999999983 78999998864
No 401
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.02 E-value=0.25 Score=47.00 Aligned_cols=36 Identities=11% Similarity=0.120 Sum_probs=31.2
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecC
Q 043512 18 FQQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERN 58 (487)
Q Consensus 18 ~~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~ 58 (487)
.....+|+|||+|..|.+.|+.|+. +|. +|+++|.+
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~-----~~~~~el~L~Di~ 53 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILM-----KDLADELALVDVI 53 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHH-----TTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHh-----CCCCceEEEEeCC
Confidence 4456789999999999999999999 887 89999975
No 402
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.97 E-value=0.18 Score=46.61 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=31.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|||+|-+|.++|..|++ .|.+|+|+.|+
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~-----~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQ-----AQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHH-----TTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-----CCCEEEEEECC
Confidence 35689999999999999999999 99999999886
No 403
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.96 E-value=0.19 Score=47.22 Aligned_cols=34 Identities=12% Similarity=0.227 Sum_probs=30.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~ 59 (487)
..+|+|||||..|.+.|+.|+. +|+ +|.++|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~-----~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISA-----KGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----cCCCCEEEEEcCCc
Confidence 4689999999999999999999 888 999999864
No 404
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.95 E-value=0.23 Score=46.58 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=31.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
..++|+|||+|-+|.++|..|++ .|. +|+|+.|+
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~-----~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLS-----TAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHH-----CCCCEEEEEeCC
Confidence 35689999999999999999999 997 99999886
No 405
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.92 E-value=0.18 Score=47.13 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=29.6
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~ 59 (487)
++|+|||+|..|.+.|+.|++ .|+ +|+++|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~-----~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLL-----NLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCCCeEEEEECCh
Confidence 479999999999999999999 887 999999853
No 406
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.83 E-value=0.19 Score=53.20 Aligned_cols=34 Identities=26% Similarity=0.303 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|...|..|++ +|++|+++|++.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~-----aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSAS-----KGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHH-----TTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHh-----CCCEEEEEECCH
Confidence 4579999999999999999999 999999999864
No 407
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.79 E-value=0.26 Score=46.69 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=30.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~ 58 (487)
.++|+|||+|-.|.+.|+.|+. .|. +|.++|.+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~-----~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMAL-----RQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCCCEEEEEeCC
Confidence 4689999999999999999999 887 99999975
No 408
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.79 E-value=0.12 Score=49.67 Aligned_cols=34 Identities=35% Similarity=0.553 Sum_probs=31.0
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCC-------CeEEEEecCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWH-------PRILMFERNGV 60 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G-------~~V~VlE~~~~ 60 (487)
++|.|||+|..|.+.|..|++ .| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~-----~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGG-----NAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----HHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHh-----cCCcccCCCCeEEEEEcChh
Confidence 579999999999999999999 88 89999998654
No 409
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.69 E-value=0.18 Score=46.72 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=30.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+|+|||+|..|+-+|..|++ .| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~-----~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPD-----WG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGG-----TS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhh-----cC-cEEEEECCC
Confidence 4689999999999999999999 89 999998764
No 410
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.65 E-value=0.27 Score=47.46 Aligned_cols=34 Identities=18% Similarity=0.451 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|+|||||..|..+|+.+++ .|++|++++.+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~-----~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKK-----AGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----CCCEEEEEeCCC
Confidence 3679999999999999999999 999999999864
No 411
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.60 E-value=0.21 Score=45.68 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|.|||+|..|.+.|..|++ .|++|.+++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~-----~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQ-----TPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-----SSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHh-----CCCeEEEECCCH
Confidence 3689999999999999999999 999999999864
No 412
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.57 E-value=0.39 Score=44.98 Aligned_cols=53 Identities=9% Similarity=0.102 Sum_probs=41.3
Q ss_pred HHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEcc---Cc--eEecCEEEEccCCC
Q 043512 257 WQMAAGLINRSDVALHLHEEIESISYLREYYELNSTK---GN--SYTCQITVVATPLD 309 (487)
Q Consensus 257 ~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~---G~--~~~ad~VV~a~~~~ 309 (487)
..+.+.+.+..|++++++++|++|..+++...|++.+ |+ ++.+|.||++++..
T Consensus 193 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 193 PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 4566666666699999999999998775555666655 75 79999999998863
No 413
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.57 E-value=0.21 Score=45.43 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=30.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
..+|+|||+|-.|..+|..|++ .|. +|+|+++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~-----~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS-----AGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH-----HTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHH-----cCCCeEEEEcCC
Confidence 3689999999999999999999 897 89999985
No 414
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.54 E-value=0.2 Score=45.86 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCC----CeEEEEecCCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWH----PRILMFERNGV 60 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G----~~V~VlE~~~~ 60 (487)
++|.|||+|..|.+.|..|++ .| ++|++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~-----~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIAN-----ANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----HTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHH-----CCCCCCCeEEEEeCCcc
Confidence 579999999999999999999 88 79999998654
No 415
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.53 E-value=0.29 Score=46.33 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
.++|+|||+|..|.+.|+.|+. .|. +|.++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~-----~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI-----KQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCceEEEEeCCh
Confidence 3689999999999999999999 887 999999864
No 416
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.50 E-value=0.23 Score=50.05 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-----~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-----HGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHH-----CCCeEEEEeCCH
Confidence 579999999999999999999 999999999864
No 417
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.49 E-value=0.22 Score=50.07 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=30.6
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~-----~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE-----KGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 479999999999999999999 999999999853
No 418
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.40 E-value=0.26 Score=46.35 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.3
Q ss_pred CCCcEEEECCC-hhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGSG-IGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaG-iaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|||+| +.|..+|..|.+ .|.+|+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~-----~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLAN-----DGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHT-----TSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHH-----CCCEEEEEeCc
Confidence 46789999999 679999999999 99999998764
No 419
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.40 E-value=0.26 Score=46.78 Aligned_cols=33 Identities=30% Similarity=0.392 Sum_probs=29.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~ 58 (487)
.++|+|||+|..|.+.|+.|+. .|. +|+++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~-----~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALIN-----QGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCCceEEEEecc
Confidence 4689999999999999999999 776 89999975
No 420
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.40 E-value=0.29 Score=45.42 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC---eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP---RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~---~V~VlE~~~ 59 (487)
.++|.|||+|-.|.+.|..|.+ .|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~-----~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA-----NGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH-----TTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHH-----CCCCCCeEEEEeCCH
Confidence 3679999999999999999999 998 999999875
No 421
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.37 E-value=0.3 Score=45.84 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||+|-.|..+|..|+. .|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~-----~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAA-----LGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence 45789999999999999999999 999999999864
No 422
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.36 E-value=0.32 Score=51.53 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
-.+|.|||||..|...|+.++. .|++|+++|.+.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~-----aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFAR-----VGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHh-----CCCchhcccchH
Confidence 4689999999999999999999 999999999864
No 423
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=90.26 E-value=0.26 Score=52.56 Aligned_cols=34 Identities=18% Similarity=0.084 Sum_probs=31.6
Q ss_pred CCcEEEEC--CChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIG--SGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIG--aGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+|+||| ||..|+-+|..|++ .|.+|+|+|+.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~-----~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLAT-----AGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHH-----cCCEEEEEeccc
Confidence 46899999 99999999999999 999999999875
No 424
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.24 E-value=0.19 Score=46.89 Aligned_cols=32 Identities=28% Similarity=0.288 Sum_probs=29.6
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|...|..|++ .|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-----~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR-----AGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH-----TTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHh-----CCCEEEEEc-CH
Confidence 589999999999999999999 999999998 53
No 425
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.20 E-value=0.32 Score=45.44 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||+|-.|..+|..|+. .|.+|++++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~-----~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAA-----LGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence 45789999999999999999999 999999999864
No 426
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.20 E-value=0.24 Score=45.31 Aligned_cols=30 Identities=27% Similarity=0.217 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEec
Q 043512 23 TVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFER 57 (487)
Q Consensus 23 dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~ 57 (487)
+|.|||+|..|.+.|..|++ .|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~-----~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS-----RGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHH-----CCCeEEEeCC
Confidence 69999999999999999999 9999999876
No 427
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.08 E-value=0.25 Score=46.67 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=29.5
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~~ 59 (487)
++|+|||+|..|.+.|+.|++ .|. +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~-----~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVAR-----QDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCCCEEEEEeCch
Confidence 479999999999999999999 776 999999864
No 428
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.05 E-value=0.26 Score=49.25 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
.++|+|||+|-.|...|..|.+ .|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~-----~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLE-----AGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-----TTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CcCEEEEEcCC
Confidence 4789999999999999999999 99999999975
No 429
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.04 E-value=0.36 Score=44.60 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|+|+|+|..|...+..|.+ +|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~-----~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA-----QGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCCEEEEEeCCc
Confidence 3679999999999999999999 999999998864
No 430
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.03 E-value=0.31 Score=46.63 Aligned_cols=34 Identities=29% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~-----~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKD-----SGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHH-----CcCEEEEEECCh
Confidence 3579999999999999999999 999999999865
No 431
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=89.96 E-value=0.21 Score=48.34 Aligned_cols=40 Identities=35% Similarity=0.516 Sum_probs=34.5
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHhcCCCCCC---eEEEEecCC-Cccce
Q 043512 20 QEPTVCIIGS-GIGGSSLAHFLRQYSSKNWHP---RILMFERNG-VVGGR 64 (487)
Q Consensus 20 ~~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~---~V~VlE~~~-~~GGr 64 (487)
...+|+|||| |.+|+.|+..+.. -|. +|+++|.+. .-||+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~-----lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHK-----VGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHH-----TTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHh-----CCCCcCceEEeeccccccCCc
Confidence 4678999999 9999999999999 897 999999865 34665
No 432
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.89 E-value=0.25 Score=45.74 Aligned_cols=34 Identities=15% Similarity=0.368 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|+|||+|-.|.+.|..|.+ .|.+|++++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~-----~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVK-----EGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH-----HTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHH-----cCCEEEEEECCH
Confidence 4689999999999999999999 899999998863
No 433
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=89.66 E-value=0.39 Score=42.26 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=29.9
Q ss_pred CcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|+|+|| |..|...+..|.+ +|++|+++.|+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKN-----RGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHh-----CCCEEEEEEcCc
Confidence 36999996 9999999999999 999999998864
No 434
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=89.53 E-value=0.38 Score=47.22 Aligned_cols=39 Identities=13% Similarity=0.174 Sum_probs=34.1
Q ss_pred CcEEEECCChhHHHHHHHHHH-hcCCCCCCeEEEEecCCCccc
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQ-YSSKNWHPRILMFERNGVVGG 63 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~-~~~~~~G~~V~VlE~~~~~GG 63 (487)
+||+|||||++|+++|..|++ .. .|++|+|+|+++..++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~---~g~~V~vie~~~~~~~ 41 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG---SKADVKVINKSRFSYF 41 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG---GGSEEEEEESSSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC---CCCeEEEEeCCCCcee
Confidence 589999999999999999998 33 6899999999986543
No 435
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.48 E-value=0.34 Score=45.22 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=29.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||+|..|..-|..|+. |++|++++++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~laa------G~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIAS------KHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHT------TSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHHc------CCEEEEEECCH
Confidence 35789999999999999999882 89999999864
No 436
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.47 E-value=0.33 Score=46.00 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERN 58 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~ 58 (487)
...++|+|||+|..|.++|+.|+. .|. ++.++|.+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~-----~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVL-----QGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----HTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCCCCeEEEEeCC
Confidence 345689999999999999999999 776 89999974
No 437
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.37 E-value=0.42 Score=44.48 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=30.3
Q ss_pred CcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
|+|+|.|| |..|...+..|.+ +|++|+++-|+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~-----~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNA-----RGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCC
Confidence 57999998 9999999999999 999999998764
No 438
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.33 E-value=0.35 Score=45.73 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=29.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~ 58 (487)
+.++|+|||+|..|.+.|+.|+. .|. +|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~-----~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMN-----QGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH-----HTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHh-----CCCCCEEEEEeCC
Confidence 34689999999999999999988 664 89999875
No 439
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.30 E-value=0.39 Score=47.92 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=31.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+.|+|+|+|-.|.++|..|+. .|.+|++.|++.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa-----~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQ-----AGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHH-----CCCEEEEEcCCH
Confidence 35779999999999999999999 999999999864
No 440
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.22 E-value=0.42 Score=42.20 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=30.0
Q ss_pred CcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|+|+|| |..|...+..|.+ +|++|+++.|+.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARR-----RGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred CEEEEEcCCCHHHHHHHHHHHH-----CCCEEEEEEecc
Confidence 36999998 9999999999999 999999998863
No 441
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=89.20 E-value=0.36 Score=48.30 Aligned_cols=40 Identities=18% Similarity=0.290 Sum_probs=30.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcC---------------CCCC-CeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSS---------------KNWH-PRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~---------------~~~G-~~V~VlE~~~~ 60 (487)
..+|+|||+|..|+-+|..|++... ...| .+|+|+++++.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 5689999999999999999997100 0025 49999998764
No 442
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.20 E-value=0.43 Score=42.66 Aligned_cols=34 Identities=21% Similarity=0.182 Sum_probs=31.2
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.+.|+|.|| |..|...|..|++ +|++|+++.|+.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~-----~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKN-----KGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHh-----CCCeEEEEECCh
Confidence 568999998 9999999999999 999999999864
No 443
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.19 E-value=0.3 Score=46.48 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=29.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..+|+|||+|..|+-+|..|++ .| +|+++++.
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~-----~~-~v~~v~~~ 194 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVST-----VA-ETTWITQH 194 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT-----TS-EEEEECSS
T ss_pred CCEEEEECCCcCHHHHHHHHHh-----hC-CEEEEECC
Confidence 4689999999999999999999 88 69999886
No 444
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.17 E-value=0.39 Score=50.80 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=32.9
Q ss_pred CCCcEEEEC--CChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 20 QEPTVCIIG--SGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 20 ~~~dVvIIG--aGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
...+|+||| +|..|+-+|..|++ .|.+|+++++.+.+
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~-----~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQ-----KGYEVSIVTPGAQV 560 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHH-----TTCEEEEEESSSST
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHh-----CCCeeEEEeccccc
Confidence 345799999 99999999999999 99999999987654
No 445
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=89.09 E-value=0.43 Score=44.19 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=31.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
..++|+|||+|-+|-++|+.|++ .|. +|+|+.|+.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~-----~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKD-----NFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHH-----TTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHH-----cCCCEEEEEeCCH
Confidence 46789999999999999999999 998 999998764
No 446
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.99 E-value=0.35 Score=47.78 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+..|||.|..|+..|..|++ .|++|++++++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~-----~G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAK-----HGVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence 3568999999999999999999 999999999865
No 447
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.99 E-value=0.16 Score=45.72 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=29.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
...+|+|||+|-.|...|..|.+ .|+ |+++|++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~-----~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRG-----SEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTT-----SEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHh-----CCe-EEEEECCH
Confidence 45689999999999999999999 999 99999864
No 448
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.96 E-value=0.43 Score=44.77 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=31.9
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
++++|+|.|| |..|...+..|.+ +|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVA-----SGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHH-----CCCEEEEEecCCc
Confidence 4578999999 9999999999999 9999999988653
No 449
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.90 E-value=0.65 Score=40.99 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=29.3
Q ss_pred CcEEEECC-ChhHHHHHHHHH-HhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGS-GIGGSSLAHFLR-QYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGa-GiaGLsaA~~L~-~~~~~~~G~~V~VlE~~~ 59 (487)
+.|+|+|| |-.|...|..|+ + +|++|+++.|+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~-----~g~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY-----TDMHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH-----CCCEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc-----CCceEEEEecCc
Confidence 45999995 999999999999 8 999999998864
No 450
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.87 E-value=0.33 Score=44.91 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
..++|+|||+|-+|.++|+.|++ .|. +|+|+.|+.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~-----~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYK-----IVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHT-----TCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-----CCCCEEEEEeCCH
Confidence 35689999999999999999999 998 999998864
No 451
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.80 E-value=0.22 Score=54.92 Aligned_cols=36 Identities=6% Similarity=0.061 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCCc
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGVV 61 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~~ 61 (487)
..+|+|||+|..|+-+|..|++ .|.+|+|+|+.+++
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~-----~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAA-----TGGVVAVIDARSSI 319 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGG-----GTCCSEEEESCSSC
T ss_pred CCeEEEEcCCHHHHHHHHHHHH-----cCCcEEEEECCCcc
Confidence 3689999999999999999999 99999999998764
No 452
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.77 E-value=0.36 Score=44.86 Aligned_cols=33 Identities=36% Similarity=0.518 Sum_probs=29.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCC--CCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNW--HPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~--G~~V~VlE~~ 58 (487)
.++|.|||+|..|.+.|..|++ . |++|++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~-----~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR-----DHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHh-----CCCCcEEEEEcCC
Confidence 3679999999999999999998 6 6899999875
No 453
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.75 E-value=0.36 Score=48.48 Aligned_cols=33 Identities=15% Similarity=0.305 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|.+.|..|++ .|++|++++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~-----~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES-----RGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHh-----CCCEEEEEcCCH
Confidence 579999999999999999999 999999999863
No 454
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=88.74 E-value=0.43 Score=44.76 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.+||-|..|..-|..|.+ +|++|+|++++.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~-----~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLK-----AGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHh-----CCCeEEEEcCCH
Confidence 4579999999999999999999 999999999864
No 455
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.67 E-value=0.45 Score=43.38 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 23 TVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 23 dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
+|+|||+|-+|-++++.|.+ .|. +|+|+.|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~-----~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQ-----MGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHH-----TTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHH-----cCCCEEEEEeCCH
Confidence 89999999999999999999 998 999998863
No 456
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=88.56 E-value=0.51 Score=43.49 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=31.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
..++++|+|+|-+|.++|+.|++ .|. +|+|+.|+.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~-----~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQ-----AGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHH-----cCCCEEEEEeCCH
Confidence 46789999999999999999999 995 999998753
No 457
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=88.50 E-value=0.35 Score=49.55 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.++|+|||+|.+|+-.|..|++ .|.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~-----~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAK-----QAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-----HBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhh-----cCceEEEEEcCCc
Confidence 4789999999999999999999 8999999998754
No 458
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.49 E-value=0.51 Score=44.48 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=31.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
..++++|+|+|-+|-++|+.|++ .|. +|+|+.|+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~-----~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAAL-----DGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHH-----CCCCEEEEEECC
Confidence 45789999999999999999999 998 89999886
No 459
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=88.30 E-value=0.65 Score=43.94 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=33.5
Q ss_pred CCCCCCCCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 15 QPTFQQEPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 15 ~~~~~~~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
|+.....+.|+|.|| |..|...+..|.+ +|++|+++.++
T Consensus 5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~ 44 (342)
T 1y1p_A 5 NAVLPEGSLVLVTGANGFVASHVVEQLLE-----HGYKVRGTARS 44 (342)
T ss_dssp TCSSCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred cccCCCCCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 444455678999998 9999999999999 99999999875
No 460
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.24 E-value=0.54 Score=43.62 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=31.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
..++|+|+|+|-+|.++|+.|++ .|. +|+|+.|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~-----~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVT-----HGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-----CCCCEEEEEECCH
Confidence 45789999999999999999999 998 799998763
No 461
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.23 E-value=0.52 Score=45.36 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=31.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|+|+|-.|..+|..|.+ .|.+|++.+.+
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~-----~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNT-----EGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHH-----CCCEEEEEcCC
Confidence 45789999999999999999999 99999999864
No 462
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.21 E-value=0.37 Score=44.87 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=29.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
.+.|+|+|+|-.|.++|..|++ .| +|+|+.|+
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~-----~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAK-----DN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTS-----SS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHH-----CC-CEEEEECC
Confidence 4679999999999999999999 99 99999875
No 463
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.21 E-value=0.5 Score=47.46 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
....|+|||+|..|..+|..|+. .|.+|+++|++.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka-----~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKG-----QGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 45789999999999999999999 999999999864
No 464
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.16 E-value=0.53 Score=43.59 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=31.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
..++|+|||+|-+|-+.|+.|++ .|. +|+|+.|+.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~-----~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLD-----QQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHh-----cCCCeEEEEECCH
Confidence 45789999999999999999999 996 999998853
No 465
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=88.12 E-value=0.16 Score=49.73 Aligned_cols=37 Identities=22% Similarity=0.450 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
.++|+|||||+||++||.+|++.. .+.+|+|+|+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~---~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD---PSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---TTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC---cCCeEEEEeCCCC
Confidence 478999999999999999999833 4579999999875
No 466
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.12 E-value=0.54 Score=46.04 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..+.|+|||.|..|..+|..|+. .|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra-----~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKA-----MGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHH-----CCCEEEEEeCCh
Confidence 35789999999999999999999 999999999764
No 467
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=87.84 E-value=0.096 Score=46.06 Aligned_cols=35 Identities=31% Similarity=0.395 Sum_probs=31.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||+|..|.+.|..|.+ .|++|++++++.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~-----~G~~V~~~~r~~ 52 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQ-----CGYSVVFGSRNP 52 (201)
Confidence 45679999999999999999999 999999998764
No 468
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.02 E-value=0.48 Score=43.40 Aligned_cols=32 Identities=22% Similarity=0.416 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 23 TVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 23 dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+|+|||+|-.|.+.|..|.+ .|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~-----~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALRE-----AGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence 79999999999999999999 899999999863
No 469
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.94 E-value=0.6 Score=44.49 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=32.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..++|.|||.|-.|.+.|..|+. .|.+|++++++..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~-----~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKG-----FNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHh-----CCCEEEEECCCcc
Confidence 35689999999999999999999 9999999998653
No 470
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=87.84 E-value=0.59 Score=43.90 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=31.9
Q ss_pred CCCCCCCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 16 PTFQQEPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 16 ~~~~~~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
....+++.|+|+|| |..|...+..|.+ .|++|+++.|+.
T Consensus 6 ~~~~m~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~l~R~~ 45 (318)
T 2r6j_A 6 EENGMKSKILIFGGTGYIGNHMVKGSLK-----LGHPTYVFTRPN 45 (318)
T ss_dssp ---CCCCCEEEETTTSTTHHHHHHHHHH-----TTCCEEEEECTT
T ss_pred cccCCCCeEEEECCCchHHHHHHHHHHH-----CCCcEEEEECCC
Confidence 33345568999997 9999999999999 999999998864
No 471
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=87.84 E-value=0.46 Score=52.70 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
..+|+|||||..|+-+|..|++ .|. +|+|+++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~-----~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALR-----CGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH-----TTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHH-----cCCCEEEEEEecC
Confidence 3489999999999999999999 996 999999876
No 472
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=87.76 E-value=0.66 Score=43.04 Aligned_cols=34 Identities=12% Similarity=0.220 Sum_probs=30.5
Q ss_pred CCCcEEEECCC-hhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGSG-IGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaG-iaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|||+| +.|..+|..|.+ .|..|+|+.+.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLW-----NNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHh-----CCCeEEEEECC
Confidence 46789999999 689999999999 99999999654
No 473
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.64 E-value=0.56 Score=44.76 Aligned_cols=33 Identities=24% Similarity=0.510 Sum_probs=29.2
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHhcCCCCC--CeEEEEecC
Q 043512 21 EPTVCIIGS-GIGGSSLAHFLRQYSSKNWH--PRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G--~~V~VlE~~ 58 (487)
.++|+|||+ |..|.++|+.|+. .| .+|+++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~-----~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAM-----MRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHH-----TTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHh-----cCCCCEEEEEeCC
Confidence 468999998 9999999999999 77 489999874
No 474
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=87.54 E-value=0.64 Score=42.54 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=30.2
Q ss_pred CCCcEEEECCC-hhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGSG-IGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaG-iaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|||+| +.|..+|..|.+ .|..|+++.++
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~-----~gAtVtv~~~~ 183 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLN-----RNYTVSVCHSK 183 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHH-----CCCeEEEEeCC
Confidence 45789999976 799999999999 99999999764
No 475
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.52 E-value=0.5 Score=44.70 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=29.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCC--CeEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWH--PRILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G--~~V~VlE~~ 58 (487)
.++|+|||||-.|.+.|+.|+. .| .+|.++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~-----~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVN-----QSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCCCEEEEEeCC
Confidence 3689999999999999999998 77 489999864
No 476
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=87.50 E-value=0.67 Score=42.99 Aligned_cols=34 Identities=15% Similarity=0.306 Sum_probs=30.1
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|||+ |+.|..+|..|.+ .|..|+++.++
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~~~~ 198 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMK-----ENATVTIVHSG 198 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCC
Confidence 4578999995 5699999999999 99999999874
No 477
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.40 E-value=0.49 Score=46.45 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~~ 59 (487)
...+|+|||+|-.|..+|..|+. .|. +|++++++.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~-----~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVD-----RGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHH-----HCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHH-----CCCCEEEEEeCCH
Confidence 45789999999999999999999 898 999998864
No 478
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.30 E-value=0.52 Score=41.72 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+++|+|+|| |..|...+..|.+ +|++|+++.|+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~-----~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALN-----RGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHT-----TTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHH-----CCCEEEEEEcCc
Confidence 468999996 9999999999999 999999999864
No 479
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.23 E-value=0.7 Score=40.00 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=30.5
Q ss_pred CcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
+.|+|+|| |..|...+..|.+ +|++|+++.|+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CCCeEEEEEeCh
Confidence 67999999 9999999999999 999999998864
No 480
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=87.23 E-value=0.45 Score=45.18 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=30.0
Q ss_pred CCCcEEEEC-CChhHHHHHHHHHHhcCCCCC--CeEEEEecCC
Q 043512 20 QEPTVCIIG-SGIGGSSLAHFLRQYSSKNWH--PRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIG-aGiaGLsaA~~L~~~~~~~~G--~~V~VlE~~~ 59 (487)
..++|+||| +|..|.+.|..|+. .| .+|++++...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~-----~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKM-----NPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHH-----CTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEeCCC
Confidence 446899999 79999999999998 88 7999998654
No 481
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=87.18 E-value=0.43 Score=46.77 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=28.3
Q ss_pred CcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 22 PTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~------G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL------QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT------TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC------CCEEEEEECCH
Confidence 369999999999999999985 68999999853
No 482
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.15 E-value=0.6 Score=44.30 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=29.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecC
Q 043512 19 QQEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERN 58 (487)
Q Consensus 19 ~~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~ 58 (487)
.+.++|+|||||-.|.+.|+.|+. .+. ++.++|.+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~-----~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVL-----QGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----HTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHc-----CCCCCEEEEEeCC
Confidence 345789999999999999999998 664 78888874
No 483
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=87.13 E-value=0.64 Score=42.81 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=30.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
.++|+|||+|-+|-++|+.|++ .|. +|+|+.|+
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~-----~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKN-----SGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHH-----TTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHH-----CCCCEEEEEeCC
Confidence 4689999999999999999999 996 89999876
No 484
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=87.04 E-value=0.58 Score=44.16 Aligned_cols=33 Identities=21% Similarity=0.445 Sum_probs=29.5
Q ss_pred CcEEEECC-ChhHHHHHHHHHHhcCCCCC--CeEEEEecCC
Q 043512 22 PTVCIIGS-GIGGSSLAHFLRQYSSKNWH--PRILMFERNG 59 (487)
Q Consensus 22 ~dVvIIGa-GiaGLsaA~~L~~~~~~~~G--~~V~VlE~~~ 59 (487)
++|+|||| |..|.+.|+.|++ .| .+|.++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~-----~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKN-----SPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHT-----CTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCCcEEEEEeCCc
Confidence 47999998 9999999999998 77 7899999864
No 485
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=87.01 E-value=0.72 Score=43.37 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=31.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
..++++|+|+|-+|-++|+.|++ .|. +|+|+.|+
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~-----~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAI-----EGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHH-----cCCCEEEEEECC
Confidence 45789999999999999999999 997 89999886
No 486
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.01 E-value=0.6 Score=44.40 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=30.6
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..+.|+|.|| |..|...+..|.+ +|++|+++.+...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRT-----QGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHH-----TTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHh-----CCCEEEEEeCCCC
Confidence 4568999999 9999999999999 9999999988653
No 487
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=87.00 E-value=0.63 Score=47.10 Aligned_cols=54 Identities=11% Similarity=0.130 Sum_probs=38.5
Q ss_pred hHHHHHHHHHhcCCeEEeCCceEEEEEeCCEEEEEEccC----ceEecCEEEEccCCC
Q 043512 256 NWQMAAGLINRSDVALHLHEEIESISYLREYYELNSTKG----NSYTCQITVVATPLD 309 (487)
Q Consensus 256 ~~~l~~~l~~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G----~~~~ad~VV~a~~~~ 309 (487)
..+.+...+++.|++|+++++|++|+.++....+.+.+| +++.||.||.|++..
T Consensus 274 ~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 274 LSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 445556666778999999999999853322224445566 369999999999864
No 488
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=86.72 E-value=0.55 Score=47.41 Aligned_cols=34 Identities=18% Similarity=0.125 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHH-HHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSS-LAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLs-aA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.++|.|||.|-+|++ +|..|++ .|++|++.|.+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~-----~G~~V~~~D~~~ 56 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN-----EGYQISGSDLAP 56 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH-----TTCEEEEECSSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh-----CCCeEEEEECCC
Confidence 468999999999997 6999999 999999999764
No 489
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=86.51 E-value=0.75 Score=45.12 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.+.|+|||.|..|..+|..|+. .|.+|+++|++.
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka-----~Ga~Viv~D~~p 244 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRG-----FGARVVVTEVDP 244 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHH-----CCCEEEEECCCh
Confidence 5789999999999999999999 999999999864
No 490
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=86.41 E-value=0.81 Score=42.14 Aligned_cols=34 Identities=18% Similarity=0.078 Sum_probs=30.3
Q ss_pred CCCcEEEECCC-hhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGSG-IGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGaG-iaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|||+| +.|..+|..|.+ .|..|+++.++
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~hs~ 192 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLL-----AGCTTTVTHRF 192 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHT-----TTCEEEEECSS
T ss_pred CCCEEEEECCChHHHHHHHHHHHH-----CCCeEEEEeCC
Confidence 46789999999 679999999999 99999999654
No 491
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.32 E-value=0.76 Score=41.79 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=29.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
..+|+|||+|-.|..+|..|++ .|. +++|+|..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~-----~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAG-----AGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHH-----TTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHH-----cCCCeEEEEeCC
Confidence 4689999999999999999999 996 88888874
No 492
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=86.30 E-value=0.82 Score=42.41 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=30.7
Q ss_pred CCCcEEEEC-CChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIG-SGIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIG-aGiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..+.|+|+| +|-.|.++|..|++ .|.+|+++.|+
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~-----~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAG-----EGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEECC
Confidence 346799999 89999999999999 99999999875
No 493
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=86.30 E-value=0.77 Score=43.66 Aligned_cols=36 Identities=28% Similarity=0.278 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNGV 60 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~~ 60 (487)
..++|.|||.|-.|.+.|..|+. .|.+|++++++..
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~-----~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEA-----FDCPISYFSRSKK 198 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHT-----TTCCEEEECSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCCEEEEECCCch
Confidence 35679999999999999999999 9999999998653
No 494
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=86.06 E-value=0.71 Score=45.50 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=29.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCC---eEEEEe
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHP---RILMFE 56 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~---~V~VlE 56 (487)
...+|+|+|||-+|.++|..|.+ .|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~-----~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTE-----AGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH-----TTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHH-----cCCCcCeEEEEE
Confidence 35689999999999999999999 997 899998
No 495
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=86.05 E-value=0.63 Score=44.26 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=31.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 20 QEPTVCIIGSGIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 20 ~~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
..++|.|||.|-.|...|..|+. .|.+|++++++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~-----~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKP-----FGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGG-----GTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHH-----CCCEEEEECCCC
Confidence 35689999999999999999999 999999999864
No 496
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.76 E-value=0.66 Score=43.83 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=29.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC--eEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP--RILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~--~V~VlE~~ 58 (487)
.++|+|||||-.|.+.|+.|+. .+. ++.++|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~-----~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQ-----QGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHH-----HTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHc-----CCCCCEEEEEeCC
Confidence 4689999999999999999998 665 89999874
No 497
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.73 E-value=0.87 Score=43.21 Aligned_cols=33 Identities=21% Similarity=0.474 Sum_probs=29.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHhcCCCCCC-eEEEEecC
Q 043512 21 EPTVCIIGSGIGGSSLAHFLRQYSSKNWHP-RILMFERN 58 (487)
Q Consensus 21 ~~dVvIIGaGiaGLsaA~~L~~~~~~~~G~-~V~VlE~~ 58 (487)
..+|+|||+|-.|..+|..|++ .|. +++|+|..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~-----aGVg~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIA-----WGVRKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-----TTCCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----cCCCEEEEecCC
Confidence 5689999999999999999999 996 78888874
No 498
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=85.52 E-value=1 Score=41.42 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=30.0
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|||+ |+.|-.+|..|.+ .|..|+++.++
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~-----~gAtVtv~h~~ 193 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLN-----AGATVSVCHIK 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCC
Confidence 4678999996 5689999999999 99999999764
No 499
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=85.49 E-value=1 Score=41.42 Aligned_cols=34 Identities=18% Similarity=0.111 Sum_probs=29.9
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecC
Q 043512 20 QEPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERN 58 (487)
Q Consensus 20 ~~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~ 58 (487)
..++|+|||+ |+.|..+|..|.+ .|..|+++.++
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~-----~gAtVtv~hs~ 194 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLL-----GGCTVTVTHRF 194 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHH-----TTCEEEEECTT
T ss_pred CCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCC
Confidence 4678999995 5799999999999 99999999764
No 500
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=85.44 E-value=0.77 Score=42.97 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=28.9
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHhcCCCCCCeEEEEecCC
Q 043512 21 EPTVCIIGS-GIGGSSLAHFLRQYSSKNWHPRILMFERNG 59 (487)
Q Consensus 21 ~~dVvIIGa-GiaGLsaA~~L~~~~~~~~G~~V~VlE~~~ 59 (487)
.+.|+|.|| |..|...+..|.+ +|++|+++.++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~ 36 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NNWHAVGCGFRR 36 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CCCeEEEEccCC
Confidence 467999998 9999999999999 999999998753
Done!