BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043522
(84 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242093218|ref|XP_002437099.1| hypothetical protein SORBIDRAFT_10g021075 [Sorghum bicolor]
gi|241915322|gb|EER88466.1| hypothetical protein SORBIDRAFT_10g021075 [Sorghum bicolor]
Length = 191
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 4 LKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
K TY+ + P+PD S+WP EL + + PP++ R GRP+ +++R E RA K+ V+
Sbjct: 25 FKATYEDRIEPIPDGSQWPIVELGFKVYPPLLGRGAGRPKVQRQRGYLEKRASKK--KVK 82
Query: 63 CSNFEEWGHNVRTCKV 78
C ++GH +TCK+
Sbjct: 83 CKRCGDFGHFAKTCKL 98
>gi|222623571|gb|EEE57703.1| hypothetical protein OsJ_08182 [Oryza sativa Japonica Group]
Length = 894
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRS--- 58
+A +TY YPVPDE++W ++ PP+ GRP+TK+ R +DE R RS
Sbjct: 740 DAYARTYCGMIYPVPDETQWEKTPFPDVDPPVARTQPGRPKTKRTRASDEPRVQGRSVAK 799
Query: 59 SSVRCSNFEEWGHNVR 74
+++RCS +E+GHN R
Sbjct: 800 TTIRCSVCKEFGHNSR 815
>gi|222628642|gb|EEE60774.1| hypothetical protein OsJ_14341 [Oryza sativa Japonica Group]
Length = 1227
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRS--- 58
+A +TY YPVPDE++W ++ PP+ GRP+TK+ R +DE R RS
Sbjct: 700 DAYARTYCGMIYPVPDETQWEKTPFPDVDPPVARTQPGRPKTKRTRASDEPRVQGRSVAK 759
Query: 59 SSVRCSNFEEWGHNVR 74
+++RCS +E+GHN R
Sbjct: 760 TTIRCSVCKEFGHNSR 775
>gi|222623570|gb|EEE57702.1| hypothetical protein OsJ_08180 [Oryza sativa Japonica Group]
Length = 404
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRS--- 58
+A +TY YPVPDE++W ++ PP+ GRP+TK+ R +DE R RS
Sbjct: 281 DAYARTYCGMIYPVPDETQWEKTPFPDVDPPVARTQPGRPKTKRTRASDEPRVQGRSVAK 340
Query: 59 SSVRCSNFEEWGHNVR 74
+++RCS +E+GHN R
Sbjct: 341 TTIRCSVCKEFGHNSR 356
>gi|31432405|gb|AAP54042.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 929
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
+A K TYKH PV + WP + + P I+ GRP+T++RREA E ++A K
Sbjct: 765 DAFKSTYKHCLLPVEGMNAWPEDDREPLTAPGYIKMPGRPRTERRREAHEPAKPSKASKF 824
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ VRC ++ GHN +C
Sbjct: 825 GTKVRCRTCKQVGHNKSSC 843
>gi|222612932|gb|EEE51064.1| hypothetical protein OsJ_31731 [Oryza sativa Japonica Group]
Length = 948
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
+A K TYKH PV + WP + + P I+ GRP+T++RREA E ++A K
Sbjct: 784 DAFKSTYKHCLLPVEGMNAWPEDDREPLTAPGYIKMPGRPRTERRREAHEPAKPSKASKF 843
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ VRC ++ GHN +C
Sbjct: 844 GTKVRCRTCKQVGHNKSSC 862
>gi|222640608|gb|EEE68740.1| hypothetical protein OsJ_27422 [Oryza sativa Japonica Group]
Length = 246
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFK 56
E KKTY+H PV ES WP + LPP + + GRP+ +R++ E ++ K
Sbjct: 16 ERYKKTYQHVLQPVEHESAWPVSPNPKPLPPRVKKMPGRPKKNRRKDPSEPVKSGTKSSK 75
Query: 57 RSSSVRCSNFEEWGHNVRTCKV 78
+ +RC +GHN RTC V
Sbjct: 76 VGTKIRCRRCGNYGHNSRTCCV 97
>gi|125553424|gb|EAY99133.1| hypothetical protein OsI_21092 [Oryza sativa Indica Group]
Length = 1005
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFK 56
E KKTY+H PV ES WP + LPP + + GRP+ +R++ E ++ K
Sbjct: 775 ERYKKTYQHVLQPVEHESAWPVSPNPKPLPPRVKKMPGRPKKNRRKDPSEPVKSGTKSSK 834
Query: 57 RSSSVRCSNFEEWGHNVRTCKV 78
+ +RC +GHN RTC V
Sbjct: 835 VGTKIRCRRCGNYGHNSRTCCV 856
>gi|222622925|gb|EEE57057.1| hypothetical protein OsJ_06863 [Oryza sativa Japonica Group]
Length = 934
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRS 58
A KKTY+H PV S WP + + P I+ GRP+T++RRE E + K
Sbjct: 753 AFKKTYEHCLEPVEGMSSWPEDERVPLNAPGYIKMPGRPKTERRRERGEPPKPTKLSKMG 812
Query: 59 SSVRCSNFEEWGHNVRTC 76
+ +RC ++ GHN +C
Sbjct: 813 TVIRCRKCKQVGHNRTSC 830
>gi|218194691|gb|EEC77118.1| hypothetical protein OsI_15544 [Oryza sativa Indica Group]
Length = 844
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN----RAFKR 57
EA +TY H YPVP E W ++ PP + GRP+ +RR A E A R
Sbjct: 689 EAYLRTYSHMVYPVPKEDGWTRTDSPDIDPPRFRKQAGRPKKSRRRSAGEEPTRASARAR 748
Query: 58 SSSVRCSNFEEWGHNVRTC 76
++V CSN + H RTC
Sbjct: 749 MNTVTCSNCKLHNHTYRTC 767
>gi|90399130|emb|CAJ86059.1| H0821G03.10 [Oryza sativa Indica Group]
Length = 1779
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
+ K Y P+ D+++WP ++ + MLPP + R+ RPQ + + E + +
Sbjct: 1616 DRFKLAYASSIVPMSDKTQWPKVDIGFKMLPPKLGRSARRPQKNRVPNSAEGKG--KGKR 1673
Query: 61 VRCSNFEEWGHNVRTCK 77
RCS + +GH RTCK
Sbjct: 1674 KRCSRCQGFGHQARTCK 1690
>gi|31432298|gb|AAP53948.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 1005
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFK 56
E KKTY+H PV ES WP + LPP + + GRP+ +R++ + ++ K
Sbjct: 775 ERYKKTYQHVLQPVEHESAWPVSPNPKPLPPRVKKMPGRPKKNRRKDPSKPVKSGTKSSK 834
Query: 57 RSSSVRCSNFEEWGHNVRTCKV 78
+ +RC +GHN RTC V
Sbjct: 835 VGTKIRCRRCGNYGHNSRTCCV 856
>gi|357151529|ref|XP_003575819.1| PREDICTED: uncharacterized protein LOC100832575 [Brachypodium
distachyon]
Length = 886
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 6 KTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSSSV 61
K Y H P+ E WP H L P I+ GRP+ ++RRE E ++ K + +
Sbjct: 775 KIYDHCLAPLEGEESWPTADHPRPLAPGFIKMPGRPKLERRREPGEAPKGSKMSKVGTKI 834
Query: 62 RCSNFEEWGHNVRTCK 77
C F GHN+++CK
Sbjct: 835 TCRLFHRQGHNMKSCK 850
>gi|242036007|ref|XP_002465398.1| hypothetical protein SORBIDRAFT_01g037930 [Sorghum bicolor]
gi|241919252|gb|EER92396.1| hypothetical protein SORBIDRAFT_01g037930 [Sorghum bicolor]
Length = 184
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 4 LKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
K Y + P+PD+ WP L + + P ++ R GRP+ + R E RA K+ VR
Sbjct: 16 FKAAYADRIEPIPDKDEWPVVNLGFKVYPSLLGRGPGRPRVVRIRGTFEQRATKK--KVR 73
Query: 63 CSNFEEWGHNVRTCKV 78
C ++GH +TCK+
Sbjct: 74 CKRCGDFGHFSKTCKL 89
>gi|218192248|gb|EEC74675.1| hypothetical protein OsI_10359 [Oryza sativa Indica Group]
Length = 668
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN---RAFKRS 58
+A +TY YPVPDE W ++ PP + GRP+ +RR DE + R
Sbjct: 525 DAYMRTYTAVIYPVPDEHSWTKTDSPDIDPPKFDKHVGRPKKSRRRGPDEGPRVQGPARK 584
Query: 59 SSVRCSNFEEWGHNVRTC 76
++ CSN GH RTC
Sbjct: 585 TTSTCSNCRRDGHTYRTC 602
>gi|125549501|gb|EAY95323.1| hypothetical protein OsI_17150 [Oryza sativa Indica Group]
Length = 471
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
KK Y P+ D+S+W + + + PP++ R+ GRP++++ + +E + KR R
Sbjct: 319 FKKAYAGHVVPMTDKSQWAKINVGFKLYPPLLKRSAGRPRSRRIKGMEEGGSGKR--KYR 376
Query: 63 CSNFEEWGHNVRTC 76
C ++GH +TC
Sbjct: 377 CKRCGQFGHIKKTC 390
>gi|113205233|gb|AAT39304.2| Transposon MuDR mudrA-like protein, putative [Solanum demissum]
Length = 888
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENR-------A 54
EA Y H+ PV E W + + M PP I + GRP+ K++RE DE R A
Sbjct: 647 EAYMLVYMHKIQPVRGEKFWKVDPSHAMEPPEIHKLVGRPKLKRKREKDEARKREGVWSA 706
Query: 55 FKRSSSVRCSNFEEWGHNVRTCKVDKGSKK 84
++ + C + GHN R C + + SK+
Sbjct: 707 SRKGLKMTCGHCSATGHNQRRCPMLQRSKQ 736
>gi|113205400|gb|AAU90303.2| Zinc finger containing preotein, putative [Solanum demissum]
Length = 263
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 1 NEALKKTYKHQYYPVPDESRW-PPELHYN--MLPPIIIRTTGRPQTKKRREADENRAFKR 57
++AL TY P+PD++ W PE N +LPP + GRP+ K+++ DE + K
Sbjct: 181 HDALANTYAVPMEPMPDKNDWTAPECVLNEVVLPPRYKKMPGRPRKKRKKNPDEKLSTKT 240
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ RC + GHN+RTC
Sbjct: 241 NCCGRCG---QEGHNIRTC 256
>gi|222624356|gb|EEE58488.1| hypothetical protein OsJ_09749 [Oryza sativa Japonica Group]
Length = 827
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN---RAFKRS 58
+A +TY YPVPDE W ++ PP + GRP+ +R+ DE + R
Sbjct: 684 DAYMRTYTAVIYPVPDEHSWTKTDSPDIDPPKFDKHVGRPKKSRRKGPDEGPRVQGPARK 743
Query: 59 SSVRCSNFEEWGHNVRTC 76
++ CSN GH RTC
Sbjct: 744 TTSTCSNCRRDGHTYRTC 761
>gi|125603675|gb|EAZ43000.1| hypothetical protein OsJ_27587 [Oryza sativa Japonica Group]
Length = 950
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 14/80 (17%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
+A K TYKH PV + WP + + P I+ GRP+T++RREA E ++A K
Sbjct: 765 DAFKSTYKHCLLPVEGMNAWPEDDREPLTAPGYIKMPGRPRTERRREAHEPAKPSKASKF 824
Query: 58 SSSVRCSNFEEWGHNVRTCK 77
+ VRC RTCK
Sbjct: 825 GTKVRC----------RTCK 834
>gi|357459339|ref|XP_003599950.1| hypothetical protein MTR_3g049490 [Medicago truncatula]
gi|355488998|gb|AES70201.1| hypothetical protein MTR_3g049490 [Medicago truncatula]
Length = 228
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 7 TYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSS-----SV 61
TY H P WP +LPP R GRP+ +R+E DE + + ++
Sbjct: 37 TYDHLILPSNGPKLWPEVNTEPILPPGARRAPGRPKKARRKENDEPKTASKKGKRNQVTL 96
Query: 62 RCSNFEEWGHNVRTCKVDKGSKK 84
RC +E GHN RTC G+ +
Sbjct: 97 RCRRCKELGHNTRTCGGKTGADR 119
>gi|358347512|ref|XP_003637800.1| hypothetical protein MTR_103s0024 [Medicago truncatula]
gi|355503735|gb|AES84938.1| hypothetical protein MTR_103s0024 [Medicago truncatula]
Length = 659
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 8 YKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV-RCSNF 66
Y + P+ E WP MLPP R GRP+ +RRE DE+ R+++ RC+
Sbjct: 242 YDNNVSPINGEDMWPEVEVDEMLPPAYKRGPGRPKKLRRREPDEDPNKGRTTTCYRCTKC 301
Query: 67 EEWGHNVRTC 76
+ GHN R+C
Sbjct: 302 GKNGHNTRSC 311
>gi|242095920|ref|XP_002438450.1| hypothetical protein SORBIDRAFT_10g019990 [Sorghum bicolor]
gi|241916673|gb|EER89817.1| hypothetical protein SORBIDRAFT_10g019990 [Sorghum bicolor]
Length = 298
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV- 61
A KTY+H PV + WP L P ++ GRP+ ++RRE E + S V
Sbjct: 76 AYMKTYQHVLQPVEGAANWPISDMPRPLAPAYVKMPGRPKIQRRREQGEEPKGTKLSRVG 135
Query: 62 ---RCSNFEEWGHNVRTCKVDK--GSKK 84
RCS + GHN R C ++ GSKK
Sbjct: 136 IKMRCSCCGKTGHNSRKCPKNREAGSKK 163
>gi|218195419|gb|EEC77846.1| hypothetical protein OsI_17088 [Oryza sativa Indica Group]
Length = 690
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSS 59
K TY+H PV WP L P +R GRP+ +++RE E + K S
Sbjct: 457 FKSTYQHCLKPVEGIDAWPISQRPKPLAPRYVRMPGRPKKERKREITEKCKTTKTCKLGS 516
Query: 60 SVRCSNFEEWGHNVRTCKVDKG 81
+RCS + GHN TC +G
Sbjct: 517 IIRCSKCKGVGHNKSTCDSRQG 538
>gi|38347492|emb|CAE05840.2| OSJNBa0091C07.2 [Oryza sativa Japonica Group]
Length = 879
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV 61
E K Y H P+ +WP H PP ++ GRP+ ++RR+ E + K+ S
Sbjct: 736 EVYNKIYDHCMMPMEGMMQWPITGHPKPGPPGYVKMPGRPRKERRRDPLEAKKGKKLSKT 795
Query: 62 ----RCSNFEEWGHNVRTCKVDKGSKK 84
RCS ++ HN+RTC + S K
Sbjct: 796 GTKGRCSQCKQTTHNIRTCPMKGNSGK 822
>gi|242082275|ref|XP_002445906.1| hypothetical protein SORBIDRAFT_07g027820 [Sorghum bicolor]
gi|241942256|gb|EES15401.1| hypothetical protein SORBIDRAFT_07g027820 [Sorghum bicolor]
Length = 846
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS---- 60
K TY+H PV ES W + LPP + + GRPQTK+R + E SS
Sbjct: 758 KATYQHVLQPVEHESAWSVSPNPRPLPPRVKKMPGRPQTKRRMDPSERVNSSTKSSRVGV 817
Query: 61 -VRCSNFEEWGHNVRTCKVD 79
++C + GHN ++C V+
Sbjct: 818 KIQCGRCKGTGHNAKSCTVE 837
>gi|218196693|gb|EEC79120.1| hypothetical protein OsI_19763 [Oryza sativa Indica Group]
Length = 758
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
+A + TY H P+ S WP + + P I+ GRP+T++RRE E + K
Sbjct: 536 DAFRSTYVHCLQPLEGMSAWPQDDREPLNAPGYIKMPGRPKTERRREKHEPPKPTKMPKY 595
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ +RC+ ++ GHN +C
Sbjct: 596 GTVIRCTRCKQVGHNKSSC 614
>gi|449525758|ref|XP_004169883.1| PREDICTED: uncharacterized protein LOC101227240 [Cucumis sativus]
Length = 167
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
N L TY YPV ++S W +H +LPP +++ GR KK+R A K
Sbjct: 80 NVCLMATYSEVVYPVGNQSEWKTSEEYVHMTILPPKVVKRVGR--LKKKRIPSVGEAPKL 137
Query: 58 SSSVRCSNFEEWGHNVRTC 76
VRC +E GHN TC
Sbjct: 138 HKCVRC---KEIGHNRSTC 153
>gi|222631411|gb|EEE63543.1| hypothetical protein OsJ_18359 [Oryza sativa Japonica Group]
Length = 904
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
+A + TY H P+ S WP + + P I+ GRP+T++RRE E + K
Sbjct: 682 DAFRSTYVHCLQPLEGMSAWPQDDREPLNAPGYIKMPGRPKTERRREKHEPPKPTKMPKY 741
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ +RC+ ++ GHN +C
Sbjct: 742 GTVIRCTRCKQVGHNKSSC 760
>gi|222626119|gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japonica Group]
Length = 974
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFKRSS 59
+ TY+ PV ES WP + LPP + + G P+ +R++ E ++ KR
Sbjct: 676 RNTYQDVLQPVEHESVWPLSTNPRPLPPRVKKMPGSPKRARRKDPTEAAGSSTKSSKRGG 735
Query: 60 SVRCSNFEEWGHNVRTCK 77
SV+C E GHN R CK
Sbjct: 736 SVKCGFCHEKGHNSRGCK 753
>gi|47777421|gb|AAT38055.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1092
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
+A + TY H P+ S WP + + P I+ GRP+T++RRE E + K
Sbjct: 870 DAFRSTYVHCLQPLEGMSAWPQDDREPLNAPGYIKMPGRPKTERRREKHEPPKPTKMPKY 929
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ +RC+ ++ GHN +C
Sbjct: 930 GTVIRCTRCKQVGHNKSSC 948
>gi|218194045|gb|EEC76472.1| hypothetical protein OsI_14206 [Oryza sativa Indica Group]
Length = 1029
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFKRSS 59
+ TY+ PV ES WP + LPP + + G P+ +R++ E ++ KR
Sbjct: 731 RNTYQDVLQPVEHESVWPLSTNPRPLPPRVKKMPGSPKRARRKDPTEAAGSSTKSSKRGG 790
Query: 60 SVRCSNFEEWGHNVRTCK 77
SV+C E GHN R CK
Sbjct: 791 SVKCGFCHEKGHNSRGCK 808
>gi|40714668|gb|AAR88574.1| putative transposon protein [Oryza sativa Japonica Group]
gi|108711944|gb|ABF99739.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 839
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFKRSS 59
+ TY+ PV ES WP + LPP + + G P+ +R++ E ++ KR
Sbjct: 663 RNTYQDVLQPVEHESVWPLSTNPRPLPPRVKKMPGSPKRARRKDPTEAAGSSTKSSKRGG 722
Query: 60 SVRCSNFEEWGHNVRTCK 77
SV+C E GHN R CK
Sbjct: 723 SVKCGFCHEKGHNSRGCK 740
>gi|218202071|gb|EEC84498.1| hypothetical protein OsI_31187 [Oryza sativa Indica Group]
Length = 772
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 17 DESRWPPELH-YNMLPPIIIRTTGRPQTKKRREADENRAF-KRSSSVRCSNFEEWGHNVR 74
D S+WP H + + PPI+ R+ GRP+ + + E R KRS S +C + +GH +
Sbjct: 569 DMSQWPQSAHGFFLYPPILKRSAGRPRNTRYKGGSEGRGTGKRSGSQKCPICKNFGHRWK 628
Query: 75 TCK 77
TCK
Sbjct: 629 TCK 631
>gi|242048604|ref|XP_002462048.1| hypothetical protein SORBIDRAFT_02g013990 [Sorghum bicolor]
gi|241925425|gb|EER98569.1| hypothetical protein SORBIDRAFT_02g013990 [Sorghum bicolor]
Length = 168
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E +K Y+ P+ D +WP L + + PPI+ GRP+ ++ + A E + KR++
Sbjct: 48 EKFRKAYQKCVKPMADRKQWPQVSLGFKLWPPIMKPAAGRPRKRRFKSAAEGGSGKRTT- 106
Query: 61 VRCSNFEEWGHNVRTC 76
RC ++ GH +TC
Sbjct: 107 -RCKRCKQLGHMEKTC 121
>gi|222629418|gb|EEE61550.1| hypothetical protein OsJ_15885 [Oryza sativa Japonica Group]
Length = 935
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSS 59
K TY+H PV WP L P +R GRP+ +++RE E + K +
Sbjct: 702 FKSTYQHCLKPVEGIDAWPISQRPKPLAPRYVRMPGRPKKERKREITEKCKTTKTCKLGT 761
Query: 60 SVRCSNFEEWGHNVRTCKVDKG 81
+RCS + GHN TC +G
Sbjct: 762 IIRCSKCKGVGHNKSTCDSRQG 783
>gi|449443634|ref|XP_004139582.1| PREDICTED: uncharacterized protein LOC101209680 [Cucumis sativus]
gi|449447673|ref|XP_004141592.1| PREDICTED: uncharacterized protein LOC101216564 [Cucumis sativus]
gi|449449118|ref|XP_004142312.1| PREDICTED: uncharacterized protein LOC101215601 [Cucumis sativus]
Length = 152
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
NE L Y YPV ++S W +H +LPP +++ GRP KK+R A K
Sbjct: 65 NECLLAAYSEAVYPVGNQSEWKTTEEYVHMTVLPPKVVKRVGRP--KKKRIPSVGEAPKL 122
Query: 58 SSSVRCSNFEEWGHNVRTC 76
RC +E GHN TC
Sbjct: 123 HKCGRC---KETGHNRLTC 138
>gi|14719322|gb|AAK73140.1|AC079022_13 Mutator-like transposase [Oryza sativa]
Length = 725
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN---RAFKRS 58
+A +TY YPVPDE RW + PP + GRP+ +RR DE + R
Sbjct: 634 DAYMRTYTAVIYPVPDEHRWTKTDSPYIDPPKFDKHVGRPKKSRRRGPDEGPRVQGPARK 693
Query: 59 SSVRCSNFEEWGHNVRTCKV 78
++ CSN GH KV
Sbjct: 694 TTSTCSNCRRDGHTCSNIKV 713
>gi|357129622|ref|XP_003566460.1| PREDICTED: uncharacterized protein LOC100845786 [Brachypodium
distachyon]
Length = 660
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENR---AFKRSS 59
A +T+K YPVP + W H ++ PP+ + GR + +R+ ADE R
Sbjct: 487 AYLETHKAIVYPVPGQHDWIRTPHADIDPPVFLIHPGRRKKNRRKGADEKEEPSGKGRMI 546
Query: 60 SVRCSNFEEWGHNVRTCKV 78
+V CSN + GH +C V
Sbjct: 547 TVTCSNCKRQGHGYISCGV 565
>gi|125532639|gb|EAY79204.1| hypothetical protein OsI_34317 [Oryza sativa Indica Group]
Length = 578
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
KK Y P+ D+S+W + + + PP++ R+ GRP++++ + +E + KR R
Sbjct: 426 FKKAYAGHVVPMTDKSQWAKINVGFKLYPPLLKRSAGRPRSRRIKGMEEGGSGKR--KYR 483
Query: 63 CSNFEEWGHNVRTC 76
C ++GH +TC
Sbjct: 484 CKRCGQFGHIKKTC 497
>gi|449463928|ref|XP_004149682.1| PREDICTED: uncharacterized protein LOC101207197 [Cucumis sativus]
Length = 749
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
NE L Y YPV ++S W +H +LPP +++ GRP KK+R A K
Sbjct: 662 NECLLAAYSEAVYPVGNQSEWKTTEEYVHMTVLPPKVVKRVGRP--KKKRIPSVGEAPKL 719
Query: 58 SSSVRCSNFEEWGHNVRTC 76
RC +E GHN TC
Sbjct: 720 HKCGRC---KETGHNRLTC 735
>gi|449443702|ref|XP_004139616.1| PREDICTED: uncharacterized protein LOC101218844 [Cucumis sativus]
Length = 806
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
NE L Y YPV ++S W +H +LPP +++ GRP KK+R A K
Sbjct: 719 NECLLAAYSEAVYPVGNQSEWKTTEEYVHMTVLPPKVVKRVGRP--KKKRIPSVGEAPKL 776
Query: 58 SSSVRCSNFEEWGHNVRTC 76
RC +E GHN TC
Sbjct: 777 HKCGRC---KETGHNRLTC 792
>gi|357152714|ref|XP_003576212.1| PREDICTED: uncharacterized protein LOC100825235 [Brachypodium
distachyon]
Length = 296
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSS-- 59
E +TY YPVP + W ++ PPI ++ GRP+ K+R+ E A + +S
Sbjct: 56 ELYLQTYSPVIYPVPGQHDWTKTNTDDIDPPIFLKHPGRPKHKRRKGQFEPPAARDTSIM 115
Query: 60 -SVRCSNFEEWGHNVRTCK 77
+ CSN + GHN +CK
Sbjct: 116 GVITCSNCKLQGHNYLSCK 134
>gi|115478262|ref|NP_001062726.1| Os09g0268600 [Oryza sativa Japonica Group]
gi|113630959|dbj|BAF24640.1| Os09g0268600 [Oryza sativa Japonica Group]
Length = 440
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFK 56
EA + Y YPVP E W ++ PP + GRP+ +RR DE RA
Sbjct: 233 EAYLRAYAPVIYPVPGEHDWTTTDSPDIDPPKFTKQPGRPKKSRRRGQDEAPKVTGRA-- 290
Query: 57 RSSSVRCSNFEEWGHNVRTCK 77
R ++ C+N E HN TCK
Sbjct: 291 RMTTTTCTNCEGMYHNYTTCK 311
>gi|449452172|ref|XP_004143834.1| PREDICTED: uncharacterized protein LOC101220761 [Cucumis sativus]
Length = 520
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
NE L Y YPV ++S W +H +LPP +++ GRP KK+R A K
Sbjct: 433 NECLLAAYSEVVYPVGNQSEWKTTEEYVHMTVLPPKVVKRVGRP--KKKRIPSVGEAPKL 490
Query: 58 SSSVRCSNFEEWGHNVRTC 76
RC +E GHN TC
Sbjct: 491 HKCGRC---KETGHNRLTC 506
>gi|358345425|ref|XP_003636779.1| hypothetical protein MTR_058s0015 [Medicago truncatula]
gi|355502714|gb|AES83917.1| hypothetical protein MTR_058s0015 [Medicago truncatula]
Length = 216
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 14 PVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRRE---ADENRAFKRSSSVRCSNFEEWG 70
P+ +++WP +LPP R GRP+ +RRE A++ R + +++ RC ++G
Sbjct: 58 PINGQNKWPKTNDPVILPPEYKRGPGRPKKLRRREQNEANQPRWRRTNTTHRCKRCLQYG 117
Query: 71 HNVRTCKVDKGSKK 84
HN RTCK+ KK
Sbjct: 118 HNARTCKLPDPKKK 131
>gi|218189089|gb|EEC71516.1| hypothetical protein OsI_03810 [Oryza sativa Indica Group]
Length = 197
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E LK Y Q+ P + W +L YN+ P + R GRP+ + R +DE KR
Sbjct: 92 EMLKMAYAGQFNPKASKDEWAHVDLGYNIKKPRLRRKPGRPRVARIRASDEASTSKRK-- 149
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 150 -KCSECHELGHTAKHCQ 165
>gi|125563060|gb|EAZ08440.1| hypothetical protein OsI_30706 [Oryza sativa Indica Group]
Length = 175
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN---RAFKRS 58
+A +TY YPVPDE W ++ PP + G P+ +RR D+ + R
Sbjct: 32 DAYMRTYTAVIYPVPDEHSWTKIDSPDIDPPKFDKHVGSPKKSRRRGPDDCPRVQGPARK 91
Query: 59 SSVRCSNFEEWGHNVRTC 76
++ CSN GH RTC
Sbjct: 92 TTSTCSNCRRDGHTYRTC 109
>gi|46398239|gb|AAS91797.1| MuDRA-like transposase [Cucumis melo]
gi|51477400|gb|AAU04773.1| MuDRA transposase-like [Cucumis melo]
Length = 807
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
NE L Y YPV ++S W +H +LPP +++ GRP KK+R A K
Sbjct: 720 NECLLAAYAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRP--KKKRIPSVGEAPKL 777
Query: 58 SSSVRCSNFEEWGHNVRTC 76
RC ++ GHN TC
Sbjct: 778 HKCGRC---KQIGHNRLTC 793
>gi|297722083|ref|NP_001173405.1| Os03g0325300 [Oryza sativa Japonica Group]
gi|255674470|dbj|BAH92133.1| Os03g0325300 [Oryza sativa Japonica Group]
Length = 905
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 7 TYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN----RAFKRSSSVR 62
TY+H PV + +WP PP ++ GRP+T++ RE E + K +R
Sbjct: 730 TYQHCLQPVEGQDKWPVSDMTKPHPPAYVKMPGRPKTQRTREPTEKPKGAKVSKVGIKMR 789
Query: 63 CSNFEEWGHNVRTCKVDK--GSKK 84
C + HN RTC +K GSK+
Sbjct: 790 CKLCHQTSHNSRTCARNKEDGSKR 813
>gi|218192735|gb|EEC75162.1| hypothetical protein OsI_11378 [Oryza sativa Indica Group]
Length = 755
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 7 TYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN----RAFKRSSSVR 62
TY+H PV + +WP PP ++ GRP+T++ RE E + K +R
Sbjct: 638 TYQHCLQPVEGQDKWPVSDMTKPHPPAYVKMPGRPKTQRTREPTEKPKGAKVSKVGIKMR 697
Query: 63 CSNFEEWGHNVRTCKVDK--GSKK 84
C + HN RTC +K GSK+
Sbjct: 698 CKLCHQTSHNSRTCARNKEDGSKR 721
>gi|222628483|gb|EEE60615.1| hypothetical protein OsJ_14029 [Oryza sativa Japonica Group]
Length = 818
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSS 59
+ +T + + PV + WP + + P I+ GRP+T++RRE +E +A K +
Sbjct: 592 MLETIRRKVMPVEGMTSWPDDPREPLNAPGYIQMPGRPKTERRREPNEPAKPTKASKFGT 651
Query: 60 SVRCSNFEEWGHNVRTCKVDKGS 82
+RC + ++ GHN + C + G+
Sbjct: 652 IMRCRSCKQPGHNSKGCHMHSGA 674
>gi|52353574|gb|AAU44140.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1040
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN---RAFKRS 58
+A +TY YPVPDE RW + PP + GRP+ +RR DE + R
Sbjct: 912 DAYMRTYTAVIYPVPDEHRWTKTDSPYIDPPKFDKHVGRPKKSRRRGPDEGPRVQGPARK 971
Query: 59 SSVRCSNFEEWGHNVRTCKVDK 80
++ CSN GH K K
Sbjct: 972 TTSTCSNCRRDGHTCSNIKARK 993
>gi|222629925|gb|EEE62057.1| hypothetical protein OsJ_16841 [Oryza sativa Japonica Group]
Length = 874
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN---RAFKRS 58
+A +TY YPVPDE RW + PP + GRP+ +RR DE + R
Sbjct: 746 DAYMRTYTAVIYPVPDEHRWTKTDSPYIDPPKFDKHVGRPKKSRRRGPDEGPRVQGPARK 805
Query: 59 SSVRCSNFEEWGHNVRTCKVDK 80
++ CSN GH K K
Sbjct: 806 TTSTCSNCRRDGHTCSNIKARK 827
>gi|218201121|gb|EEC83548.1| hypothetical protein OsI_29170 [Oryza sativa Indica Group]
Length = 567
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
K+ Y P+ D S+W + + + PPI+ R+ GRP++++ + +E + KR R
Sbjct: 365 FKRAYAGFVVPMTDNSQWQKVNVGFKLYPPILKRSAGRPRSRRLKGVEEVCSGKRKH--R 422
Query: 63 CSNFEEWGHNVRTC 76
C ++GH ++TC
Sbjct: 423 CKRCGQFGHIMKTC 436
>gi|449531503|ref|XP_004172725.1| PREDICTED: uncharacterized protein LOC101232325 [Cucumis sativus]
Length = 153
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
NE L Y YPV ++S W +H +LPP +++ GRP KK+R A K
Sbjct: 65 NECLLAAYSEAVYPVGNQSEWKTSEKYVHMTVLPPKVVKRVGRP--KKKRIPSVGEAPKL 122
Query: 58 SSSVRCSNFEEWG-HNVRTC 76
+C F+E G HN TC
Sbjct: 123 H---KCGRFKEIGRHNRLTC 139
>gi|218184809|gb|EEC67236.1| hypothetical protein OsI_34166 [Oryza sativa Indica Group]
Length = 672
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFK---RSSSV 61
+K Y+H YPVP E W ++ PP + GRP+ +R+ A E R +++
Sbjct: 516 EKAYQHLIYPVPGEHDWIRTTTPDIDPPKFNKHPGRPKKSRRKSAGEETQHSGRVRMTTI 575
Query: 62 RCSNFEEWGHNVRTC 76
CSN + GH +C
Sbjct: 576 TCSNCKNHGHKYISC 590
>gi|242092796|ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [Sorghum bicolor]
gi|241915111|gb|EER88255.1| hypothetical protein SORBIDRAFT_10g010620 [Sorghum bicolor]
Length = 981
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
EA TY+H PV WP LPP ++ GRP+T++RRE E + K
Sbjct: 780 EAYMMTYQHVLQPVQGPENWPTSDMPRPLPPAFVKMPGRPKTQRRREQGEEPKGTKLSKV 839
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ + C + HN R C
Sbjct: 840 GTKMTCRLCGKQDHNSRRC 858
>gi|22213194|gb|AAM94534.1| putative transposon protein [Oryza sativa Japonica Group]
gi|31433228|gb|AAP54770.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 835
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 3 ALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV 61
A K+ Y P+ D+++W + + PP++ R+ GRP++++ + +E KR
Sbjct: 722 AFKRAYAGHVVPMTDKAQWAKGNIGLKLHPPLLKRSAGRPRSRRIKGVEEGGVGKR--KY 779
Query: 62 RCSNFEEWGHNVRTC 76
RC ++GH +TC
Sbjct: 780 RCKRCGQFGHTKKTC 794
>gi|222630640|gb|EEE62772.1| hypothetical protein OsJ_17575 [Oryza sativa Japonica Group]
Length = 591
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E LK Y Q+ + + W +L Y + P + R GRP+ + R +DE KR
Sbjct: 395 EMLKMAYAGQFKLMASKDEWAHVDLGYKIKKPRLRRKPGRPRVARIRASDETSTSKRK-- 452
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 453 -KCSECHELGHTAKHCQ 468
>gi|357119385|ref|XP_003561422.1| PREDICTED: uncharacterized protein LOC100842004 [Brachypodium
distachyon]
Length = 355
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRR---EADENRAFKRS 58
E ++Y YPVP + W + PPI ++ GRP+ K+R+ E R R
Sbjct: 169 EMYLQSYSDVIYPVPGQHDWTRTNTVDTDPPIFLKHPGRPKHKRRKGQFEPPAARDTSRM 228
Query: 59 SSVRCSNFEEWGHNVRTCK 77
+ C+N + GHN +CK
Sbjct: 229 GLMTCNNCKLQGHNYLSCK 247
>gi|297604766|ref|NP_001056081.2| Os05g0522400 [Oryza sativa Japonica Group]
gi|255676498|dbj|BAF17995.2| Os05g0522400 [Oryza sativa Japonica Group]
Length = 649
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E LK Y Q+ P+ + W +L Y + P + R GRP+ + R +DE KR
Sbjct: 544 EMLKMAYAGQFNPMASKDEWAHVDLGYKIKKPRLRRKPGRPRVARIRASDEASTSKRK-- 601
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 602 -KCSECHELGHTAKHCQ 617
>gi|218197120|gb|EEC79547.1| hypothetical protein OsI_20668 [Oryza sativa Indica Group]
Length = 462
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E LK Y Q+ P+ + W +L Y + P + R GRP+ + R +DE KR
Sbjct: 357 EMLKMAYAGQFNPMASKDEWAHVDLGYKIKKPRLRRKPGRPRVARIRASDEASTSKRK-- 414
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 415 -KCSECHELGHTAKHCQ 430
>gi|113205434|gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
tuberosum]
Length = 616
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIII--RTTGRPQTKKRREADENRAFK--- 56
E ++ Y+H + WP LP I+ + TGR Q +R+EADE A +
Sbjct: 265 ETYRRIYEHAILSINGPQMWPKSTKVPPLPLTIVGNKKTGRKQKARRKEADEVGASRTKI 324
Query: 57 --RSSSVRCSNFEEWGHNVRTCKVDKGSKK 84
+ S+ CS + GHN +TCK + S++
Sbjct: 325 KRKQQSLDCSTCNKPGHNKKTCKYNVVSQE 354
>gi|308081269|ref|NP_001183476.1| uncharacterized protein LOC100501908 [Zea mays]
gi|238011782|gb|ACR36926.1| unknown [Zea mays]
Length = 796
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 15/86 (17%)
Query: 5 KKTYKHQYYPVPDESRWPP----------ELHYNML--PPIIIRTTGRPQTKKRREADEN 52
+KTY +P+PD++ W E+ M+ PP +R GRP+ K+ R D
Sbjct: 712 RKTYSQTIHPIPDKTLWSETADQDQGQDGEVKAEMVINPPKSLRPPGRPRKKRVRAEDRG 771
Query: 53 RAFKRSSSVRCSNFEEWGHNVRTCKV 78
R KR V CS + GH TC V
Sbjct: 772 RV-KR--VVHCSRCNQTGHFRTTCAV 794
>gi|147796357|emb|CAN72555.1| hypothetical protein VITISV_015793 [Vitis vinifera]
Length = 367
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 8 YKHQYYPVPDESRWP----PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC 63
Y Q+ P+P + WP P +H N P ++R GRP++ + R + R + S VRC
Sbjct: 8 YTPQFNPIPHHAYWPEPNFPIVHPN---PTLVRDKGRPRSSRIRNEMDWR--EPSVKVRC 62
Query: 64 SNFEEWGHNVRTC 76
++ GHN R C
Sbjct: 63 GLCKQEGHNHRKC 75
>gi|449528176|ref|XP_004171082.1| PREDICTED: uncharacterized protein LOC101231503 [Cucumis sativus]
Length = 243
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 1 NEALKKTYKHQYYPVPDESRW-PPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSS 59
++ L TY P+ S W LPPI R+ GRP+ + E SS
Sbjct: 164 SQTLLSTYLGHVLPIGVHSNWRLVNDDIGALPPIFKRSVGRPKNLRVPSIGE----VNSS 219
Query: 60 SVRCSNFEEWGHNVRTCKV 78
S RCS+ GHN RTCK+
Sbjct: 220 STRCSSCHGKGHNSRTCKL 238
>gi|218184921|gb|EEC67348.1| hypothetical protein OsI_34434 [Oryza sativa Indica Group]
Length = 483
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 3 ALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV 61
A K+ Y P+ D+++W + + PP++ R+ GRP++++ + +E KR
Sbjct: 370 AFKRAYAGHVVPMTDKAQWAKGNIGLKLHPPLLKRSAGRPRSRRIKGVEEGGVGKRKYGC 429
Query: 62 -RCSNFEEWGHNVRTC 76
RC F GH +TC
Sbjct: 430 KRCGQF---GHTKKTC 442
>gi|356505949|ref|XP_003521751.1| PREDICTED: uncharacterized protein LOC100795835 [Glycine max]
Length = 758
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 5 KKTYKHQYYPVPDESRWPP----------------ELHYNMLPPIIIRTTGRPQTKKRRE 48
+KTY +P+PD+S W +L + PP +R GRP+ K+ R
Sbjct: 670 RKTYSQTIHPIPDKSLWKELSEAEGDVNASNANQLQLQIAINPPKSLRPPGRPRKKRVRA 729
Query: 49 ADENRAFKRSSSVRCSNFEEWGHNVRTC 76
D R KR V CS + GH TC
Sbjct: 730 EDRGRV-KR--VVHCSRCNQTGHFRTTC 754
>gi|357132996|ref|XP_003568114.1| PREDICTED: uncharacterized protein LOC100835098 isoform 1
[Brachypodium distachyon]
gi|357132998|ref|XP_003568115.1| PREDICTED: uncharacterized protein LOC100835098 isoform 2
[Brachypodium distachyon]
Length = 748
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Query: 5 KKTYKHQYYPVPDESRW--PPE---------LHYNMLPPIIIRTTGRPQTKKRREADENR 53
+KTY +P+PD++ W PE L + PP +R GRP+ K+ R D R
Sbjct: 665 RKTYSQTIHPIPDKTHWNETPEDQGEAEQGRLEVIINPPKSLRPPGRPRKKRVRAEDLGR 724
Query: 54 AFKRSSSVRCSNFEEWGHNVRTC 76
KR V CS + GH TC
Sbjct: 725 V-KR--VVHCSRCNQTGHFRTTC 744
>gi|77548516|gb|ABA91313.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 894
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 4 LKKTYKHQYYPVPDESRWPPELH-YNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
+K Y+ +PD+++WP H + + PPI+ ++ GRP+T + + E + KRS +
Sbjct: 699 VKGAYEKLIPSLPDKAQWPKADHGFFLAPPILKKSAGRPRTMRYKGCTE-KGSKRSRRHK 757
Query: 63 CSNFEEWGHNVRTCK 77
C + +GH+ CK
Sbjct: 758 CPICKSYGHHWHNCK 772
>gi|222618593|gb|EEE54725.1| hypothetical protein OsJ_02067 [Oryza sativa Japonica Group]
Length = 578
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAF-KRSS 59
E K Y P+PD+S W + + M PPI+ R+ GRP+T++ +E + KR
Sbjct: 394 EMFKTAYAKTVPPMPDKSLWEKVDTRFKMWPPILKRSAGRPRTRRFIGVEEGGSGKKRRR 453
Query: 60 SVRCSNFEEWGHNVRTC 76
RC F GH +TC
Sbjct: 454 YNRCHGF---GHLQKTC 467
>gi|77551327|gb|ABA94124.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 806
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN------RAF 55
EA K Y + P D+++W +LPP+ + GRP+ +R++ E +
Sbjct: 616 EAFKSVYANNIMPCSDKAKWEKMNEPQILPPVYEKKVGRPKKTRRKQPTEVHGKSGPKLS 675
Query: 56 KRSSSVRCSNFEEWGHNVRTCKVDK 80
K ++ CS E HN + C++ K
Sbjct: 676 KHGVTIHCSYCHEANHNKKGCEMRK 700
>gi|215678724|dbj|BAG95161.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 211
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
E+ + YK+ P D+S+W N+ PP + GRP+ +R+++ E + K
Sbjct: 102 ESFRAAYKYNIVPSRDQSKWEKMNGVNVQPPKYEKKVGRPKKTRRKQSIELEGGTKLSKH 161
Query: 58 SSSVRCSNFEEWGHNVRTCKVDKGSKK 84
+ CS + GHN C++ +KK
Sbjct: 162 GVVIHCSYCDGAGHNRNNCELLGTTKK 188
>gi|125560848|gb|EAZ06296.1| hypothetical protein OsI_28531 [Oryza sativa Indica Group]
Length = 819
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFKR 57
A ++ Y+H Y VP W ++ PP + GRP+ +R+ DE RA R
Sbjct: 665 AYQRAYQHSIYHVPSSDDWTKTDTPDIDPPKFSKHPGRPKNNRRKRGDEPSQPSGRA--R 722
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+++ CSN + GH +C
Sbjct: 723 MTTITCSNCHKQGHKCTSC 741
>gi|222622696|gb|EEE56828.1| hypothetical protein OsJ_06430 [Oryza sativa Japonica Group]
Length = 685
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
+ Y + +PD S+WP L + + PP + R GRP+ + R A E A + VR
Sbjct: 540 FRAAYAGRVPTMPDRSQWPVVNLGFKVCPPRLKRGAGRPRVTRIRGALEPGARR----VR 595
Query: 63 CSNFEEWGHNVRTCK 77
C +GH +TCK
Sbjct: 596 CRRCHGFGHFAKTCK 610
>gi|381160007|ref|ZP_09869239.1| polyribonucleotide nucleotidyltransferase [Thiorhodovibrio sp. 970]
gi|380878071|gb|EIC20163.1| polyribonucleotide nucleotidyltransferase [Thiorhodovibrio sp. 970]
Length = 702
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 18 ESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
E R P LHYN PP + TGR + KRRE R KR + EE+ ++VR
Sbjct: 371 ERREPFMLHYN-FPPFCVGETGRVGSPKRREIGHGRLAKRGVMAAMPSIEEFPYSVR 426
>gi|449465320|ref|XP_004150376.1| PREDICTED: uncharacterized protein LOC101208747 [Cucumis sativus]
Length = 426
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
NE L Y YPV ++S W +H +LPP +++ GRP KK+R A K
Sbjct: 288 NECLLAAYSEAVYPVGNQSEWKTTEEYVHMTVLPPKVVKRVGRP--KKKRIPSVGEAPKL 345
Query: 58 SSSVRCSNFEEW 69
RCS ++
Sbjct: 346 HKCGRCSALADY 357
>gi|125598828|gb|EAZ38404.1| hypothetical protein OsJ_22780 [Oryza sativa Japonica Group]
Length = 767
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
E KK Y H P+ S WP + + P I+ G P+T++RREA E RA K
Sbjct: 698 ETFKKIYAHCLQPLEGMSSWPEDDRQPLNAPGYIKMPGTPKTERRREAHEPAKATRASKI 757
Query: 58 SSSVRC 63
+ +RC
Sbjct: 758 GTIIRC 763
>gi|215767411|dbj|BAG99639.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 227
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
E+ K TY H PV S WP + + IR G+P+ ++RRE E + +
Sbjct: 123 ESFKATYAHCLEPVEGMSAWPEDDREPLTAHGYIRMLGKPKIERRREMHEPAKPTKMSRF 182
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ +RCS + GHN C
Sbjct: 183 GTRLRCSKCKLVGHNKSRC 201
>gi|222622739|gb|EEE56871.1| hypothetical protein OsJ_06504 [Oryza sativa Japonica Group]
Length = 945
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 4 LKKTYKHQYYPVPDESRWPPELH-YNMLPPIIIRTTGRPQTKKRREADENRAFK--RSSS 60
Y + + D S+WP H + + PPI+ R+ GRP+ ++ + E + RS S
Sbjct: 717 FAAAYAPRIPGLTDMSQWPESTHGFFLYPPILKRSAGRPRNRRCKGGAEGKGTSKGRSGS 776
Query: 61 VRCSNFEEWGHNVRTCK 77
+C +GH +TCK
Sbjct: 777 QKCPICHNFGHRWQTCK 793
>gi|356535187|ref|XP_003536130.1| PREDICTED: uncharacterized protein LOC100786116 [Glycine max]
Length = 752
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 17/84 (20%)
Query: 5 KKTYKHQYYPVPDESRW------------PPELHYNMLPPIIIRTTGRPQTKKRREADEN 52
+KTY +P+PD+S W E+ N PP +R GRP+ K+ R D
Sbjct: 670 RKTYSQTIHPIPDKSLWKELSEGDANASKATEVVIN--PPKSLRPPGRPRKKRVRAEDRG 727
Query: 53 RAFKRSSSVRCSNFEEWGHNVRTC 76
R KR V CS + GH TC
Sbjct: 728 RV-KR--VVHCSRCNQTGHFRTTC 748
>gi|242048212|ref|XP_002461852.1| hypothetical protein SORBIDRAFT_02g009260 [Sorghum bicolor]
gi|241925229|gb|EER98373.1| hypothetical protein SORBIDRAFT_02g009260 [Sorghum bicolor]
Length = 728
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN----RAFKR 57
EA +TY+H PV + WP LPP ++ GRP+T+++RE E + K
Sbjct: 597 EAYMRTYEHVLMPVEGAANWPISDMPRPLPPAYVKMPGRPKTQRKREEWEQPKGVKLSKV 656
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ C + HN R C
Sbjct: 657 GIKITCRLCGKGDHNSRRC 675
>gi|77554689|gb|ABA97485.1| transposon protein, putative, Mutator sub-class, expressed [Oryza
sativa Japonica Group]
Length = 563
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
+ Y P+PD+S W + + M PPI+ R+ GRP+T++ +E + K+ R
Sbjct: 405 FRAAYSTTVPPMPDKSLWEKVDTGFKMWPPILKRSAGRPRTRRFIGVEEGGSGKKRR--R 462
Query: 63 CSNFEEWGHNVRTC 76
C +GH +TC
Sbjct: 463 CKRCHGFGHLQKTC 476
>gi|186476768|ref|YP_001858238.1| polynucleotide phosphorylase/polyadenylase [Burkholderia phymatum
STM815]
gi|226702629|sp|B2JDN2.1|PNP_BURP8 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|184193227|gb|ACC71192.1| Polyribonucleotide nucleotidyltransferase [Burkholderia phymatum
STM815]
Length = 712
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + + EE+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAACLPSAEEFGYSIR 433
>gi|38346848|emb|CAD39930.2| OSJNBa0091C12.8 [Oryza sativa Japonica Group]
Length = 816
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 14 PVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSSSVRCSNFEEW 69
PV + WP + + P I+ GRP+T++RRE +E +A K + +RC + ++
Sbjct: 600 PVEGMTSWPDDPREPLNAPGYIQMPGRPKTERRREPNEPAKPTKASKFGTIMRCRSCKQP 659
Query: 70 GHNVRTCKVDKGS 82
GHN + C + G+
Sbjct: 660 GHNSKGCHMHSGA 672
>gi|222640140|gb|EEE68272.1| hypothetical protein OsJ_26506 [Oryza sativa Japonica Group]
Length = 505
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 7 TYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSN 65
Y P+ D+S+W + + + PP++ R+ GRP++++ + +E + KR RC
Sbjct: 356 AYAGHVVPMTDKSQWAKINVGFKLYPPLLKRSAGRPRSRRIKGMEEGGSGKR--KYRCKR 413
Query: 66 FEEWGHNVRTC 76
++GH +TC
Sbjct: 414 CGQFGHIKKTC 424
>gi|222635302|gb|EEE65434.1| hypothetical protein OsJ_20795 [Oryza sativa Japonica Group]
Length = 914
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
EA + TY H P+ S WP + + P I+ P+T +RRE E + +
Sbjct: 719 EAFRSTYDHYLQPLEGMSAWPQDDREPLNAPGYIKMPDWPKTARRREMHEPPKPTKMSRF 778
Query: 58 SSSVRCSNFEEWGHNVRTC 76
S +RC+ + GHN +C
Sbjct: 779 GSVMRCTRCHQVGHNKSSC 797
>gi|218197885|gb|EEC80312.1| hypothetical protein OsI_22353 [Oryza sativa Indica Group]
Length = 725
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
EA + TY H P+ S WP + + P I+ P+T +RRE E + +
Sbjct: 530 EAFRSTYDHYLQPLEGMSAWPQDDREPLNAPGYIKMPDWPKTARRREMHEPPKPTKMSRF 589
Query: 58 SSSVRCSNFEEWGHNVRTC 76
S +RC+ + GHN +C
Sbjct: 590 GSVMRCTRCHQVGHNKSSC 608
>gi|25446689|gb|AAN74836.1| Putative maize transposon MuDR mudrA-like protein [Oryza sativa
Japonica Group]
gi|108705921|gb|ABF93716.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 884
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
+ Y + +PD S+WP L + + PP + R GRP+ + R A E A + VR
Sbjct: 739 FRAAYAGRVPTMPDRSQWPVVNLGFKVCPPRLKRGAGRPRVTRIRGALEPGARR----VR 794
Query: 63 CSNFEEWGHNVRTCK 77
C +GH +TCK
Sbjct: 795 CRRCHGFGHFAKTCK 809
>gi|225452988|ref|XP_002262784.1| PREDICTED: uncharacterized protein LOC100258751 [Vitis vinifera]
gi|147858253|emb|CAN83921.1| hypothetical protein VITISV_011842 [Vitis vinifera]
Length = 749
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query: 5 KKTYKHQYYPVPDESRW----------PPELHYNMLPPIIIRTTGRPQTKKRREADENRA 54
+KTY +P+PD++ W + + PP +R GRP+ K+ R D R
Sbjct: 667 RKTYSQTIHPIPDKTLWKELSEGDPNGSKSVEIMINPPKSLRPPGRPRKKRVRAEDRGRV 726
Query: 55 FKRSSSVRCSNFEEWGHNVRTC 76
KR V CS + GH TC
Sbjct: 727 -KR--VVHCSRCNQTGHFRTTC 745
>gi|218199058|gb|EEC81485.1| hypothetical protein OsI_24821 [Oryza sativa Indica Group]
gi|222636401|gb|EEE66533.1| hypothetical protein OsJ_23020 [Oryza sativa Japonica Group]
Length = 247
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
E+ K TY H PV S WP + + IR G+P+ ++RRE E + +
Sbjct: 143 ESFKATYAHCLEPVEGMSAWPEDDREPLTAHGYIRMLGKPKIERRREMHEPAKPTKMSRF 202
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ +RCS + GHN C
Sbjct: 203 GTRLRCSKCKLVGHNKSRC 221
>gi|108709379|gb|ABF97174.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 368
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 14 PVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHN 72
P+PD+S W + + M PPI+ R+ GRP+T+K +E + K+ RC +GH
Sbjct: 181 PMPDKSLWDKVDTGFKMWPPILKRSAGRPRTRKFIGVEEGGSGKKRR--RCKRCHGFGHL 238
Query: 73 VRTC 76
+TC
Sbjct: 239 QKTC 242
>gi|222616919|gb|EEE53051.1| hypothetical protein OsJ_35784 [Oryza sativa Japonica Group]
Length = 467
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
+ Y P+PD+S W + + M PPI+ R+ GRP+T++ +E + K+ R
Sbjct: 260 FRAAYSTTVPPMPDKSLWEKVDTGFKMWPPILKRSAGRPRTRRFIGVEEGGSGKKRR--R 317
Query: 63 CSNFEEWGHNVRTC 76
C +GH +TC
Sbjct: 318 CKRCHGFGHLQKTC 331
>gi|12583804|gb|AAG59656.1|AC084319_14 putative mutator transposable element [Oryza sativa Japonica Group]
gi|13957641|gb|AAK50596.1|AC084404_21 hypothetical protein [Oryza sativa Japonica Group]
Length = 294
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 14 PVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHN 72
P+PD+S W + + M PPI+ R+ GRP+T+K +E + K+ RC +GH
Sbjct: 107 PMPDKSLWDKVDTGFKMWPPILKRSAGRPRTRKFIGVEEGGSGKKRR--RCKRCHGFGHL 164
Query: 73 VRTC 76
+TC
Sbjct: 165 QKTC 168
>gi|147778959|emb|CAN62541.1| hypothetical protein VITISV_042505 [Vitis vinifera]
Length = 167
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYN---MLPPIIIRTTGRPQTKKRREADENRAFKRSS 59
AL +Y YP +E W H +LPP R TGRP+ + E KR+S
Sbjct: 91 ALLSSYSECIYPTGNEIDWVVPNHIRDKVVLPPKTRRPTGRPKKVRIPSGGEG---KRTS 147
Query: 60 SVRCSNFEEWGHNVRTCK 77
RCS ++GHN +TCK
Sbjct: 148 --RCSRCGQYGHNXKTCK 163
>gi|357450533|ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484591|gb|AES65794.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 958
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREA-----DENRAFK 56
E + Y +P+ + W + PP + R GRP+ K+R +A DE + +
Sbjct: 383 EQYAECYSSIIFPINGQDLWETTKCTDFQPPPVKRQPGRPKKKRRLDASELMGDEKQMKR 442
Query: 57 RSSSVRCSNFEEWGHNVRTCKV 78
S ++CS ++ GHN TC +
Sbjct: 443 ASYGIKCSRCKQTGHNKSTCTL 464
>gi|218189610|gb|EEC72037.1| hypothetical protein OsI_04938 [Oryza sativa Indica Group]
Length = 531
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 14 PVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSSSVRCSNFEEW 69
PV + WP + + P I+ GRP+T++RRE +E +A K + +RC + ++
Sbjct: 315 PVEGMTSWPDDPREPLNAPGYIQMPGRPKTERRREPNEPAKPTKASKFGTIMRCRSCKQP 374
Query: 70 GHNVRTCKVDKG 81
GHN + C + G
Sbjct: 375 GHNSKGCHMHSG 386
>gi|222625241|gb|EEE59373.1| hypothetical protein OsJ_11479 [Oryza sativa Japonica Group]
Length = 235
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 14 PVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHN 72
P+PD+S W + + M PPI+ R+ GRP+T+K +E + K+ RC +GH
Sbjct: 48 PMPDKSLWDKVDTGFKMWPPILKRSAGRPRTRKFIGVEEGGSGKKRR--RCKRCHGFGHL 105
Query: 73 VRTC 76
+TC
Sbjct: 106 QKTC 109
>gi|297606587|ref|NP_001058685.2| Os07g0102900 [Oryza sativa Japonica Group]
gi|255677439|dbj|BAF20599.2| Os07g0102900, partial [Oryza sativa Japonica Group]
Length = 257
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
E KK Y H P+ S WP + + P I+ G P+T++RREA E RA K
Sbjct: 188 ETFKKIYAHCLQPLEGMSSWPEDDRQPLNAPGYIKMPGTPKTERRREAHEPAKATRASKI 247
Query: 58 SSSVRC 63
+ +RC
Sbjct: 248 GTIIRC 253
>gi|356576716|ref|XP_003556476.1| PREDICTED: uncharacterized protein LOC100811471 isoform 1 [Glycine
max]
gi|356576718|ref|XP_003556477.1| PREDICTED: uncharacterized protein LOC100811471 isoform 2 [Glycine
max]
Length = 750
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 17/84 (20%)
Query: 5 KKTYKHQYYPVPDESRW------------PPELHYNMLPPIIIRTTGRPQTKKRREADEN 52
+KTY +P+PD+S W E+ N PP +R GRP+ K+ R D
Sbjct: 668 RKTYSQTIHPIPDKSLWKELSEGDANVSKATEVVIN--PPKSLRPPGRPRKKRVRAEDRG 725
Query: 53 RAFKRSSSVRCSNFEEWGHNVRTC 76
R KR V CS + GH TC
Sbjct: 726 RV-KR--VVHCSRCNQTGHFRTTC 746
>gi|14018095|gb|AAK52158.1|AC084831_12 putative transposon protein [Oryza sativa Japonica Group]
gi|24796791|gb|AAN64468.1| putative mutator-like transposase [Oryza sativa Japonica Group]
Length = 746
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
++ K+ Y PV D++ W + PP+ + GRP+T +R++ E + K
Sbjct: 616 QSFKQAYMFNIMPVRDKTHWEKMNGVPVNPPVYEKKVGRPKTTRRKQPQELDAGTKISKH 675
Query: 58 SSSVRCSNFEEWGHNVRTCKVDKGSK 83
+ CS + GHN + CK K ++
Sbjct: 676 GVQIHCSYCKNVGHNKKGCKKRKAAQ 701
>gi|108709273|gb|ABF97068.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 775
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSS-- 59
++ K+ Y PV D++ W + PP+ + GRP+T +R++ E A + S
Sbjct: 645 QSFKQAYMFNIMPVRDKTHWEKMNGVPVNPPVYEKKVGRPKTTRRKQPQELDAGTKISKH 704
Query: 60 --SVRCSNFEEWGHNVRTCKVDKGSK 83
+ CS + GHN + CK K ++
Sbjct: 705 GVQIHCSYCKNVGHNKKGCKKRKAAQ 730
>gi|218186080|gb|EEC68507.1| hypothetical protein OsI_36776 [Oryza sativa Indica Group]
Length = 685
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRA------FK 56
A K Y P D+S+W +LPP+ + GRP+ +R++ E + K
Sbjct: 503 AFKAVYADNIMPCNDKSKWEKMNGPQILPPVYEKKVGRPKKSRRKQPQEVQGRNGPKLTK 562
Query: 57 RSSSVRCSNFEEWGHNVRTCKVDK 80
++ CS E HN + C++ K
Sbjct: 563 HGVTIHCSYCHEANHNKKGCELRK 586
>gi|77552060|gb|ABA94857.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 735
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRA------FK 56
A K Y P D+S+W +LPP+ + GRP+ +R++ E + K
Sbjct: 553 AFKAVYADNIMPCNDKSKWEKMNGPQILPPVYEKKVGRPKKSRRKQPQEVQGRNGPKLTK 612
Query: 57 RSSSVRCSNFEEWGHNVRTCKVDK 80
++ CS E HN + C++ K
Sbjct: 613 HGVTIHCSYCHEANHNKKGCELRK 636
>gi|330817796|ref|YP_004361501.1| Polyribonucleotide nucleotidyltransferase [Burkholderia gladioli
BSR3]
gi|327370189|gb|AEA61545.1| Polyribonucleotide nucleotidyltransferase [Burkholderia gladioli
BSR3]
Length = 712
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREVGHGRLAKRALVACLPSAEEFGYSIR 433
>gi|357447481|ref|XP_003594016.1| hypothetical protein MTR_2g020400 [Medicago truncatula]
gi|355483064|gb|AES64267.1| hypothetical protein MTR_2g020400 [Medicago truncatula]
Length = 181
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRS 58
+ + TY + PV + W P + +PP + R+ GRP+ +R++ +E K++
Sbjct: 29 SYRATYSYFIQPVNSQIYWEPTPYEKPVPPKVKRSAGRPKKNRRKDGNEEPIGGSGMKKT 88
Query: 59 -SSVRCSNFEEWGHNVRTC 76
+ +C E GHN R+C
Sbjct: 89 YNDTQCGRCELMGHNSRSC 107
>gi|242048572|ref|XP_002462032.1| hypothetical protein SORBIDRAFT_02g013090 [Sorghum bicolor]
gi|241925409|gb|EER98553.1| hypothetical protein SORBIDRAFT_02g013090 [Sorghum bicolor]
Length = 849
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN----RAFKR 57
EA +TY+H PV + WP LPP ++ GRP+T+++RE E + K
Sbjct: 659 EAYMRTYEHVLMPVEGAANWPISDMPRPLPPAYVKMPGRPKTQRKREEWEQPKGVKLSKV 718
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ C + HN R C
Sbjct: 719 GIKMTCRLCGKGDHNSRRC 737
>gi|125602915|gb|EAZ42240.1| hypothetical protein OsJ_26804 [Oryza sativa Japonica Group]
Length = 467
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFK---RSSS 60
+K Y+H YPVP E W ++ PP + RP+ +R+ E R ++
Sbjct: 306 FEKAYQHLIYPVPGEHDWVRTTTPDIDPPKFNKHPSRPKKSRRKSVGEETQHSGRVRMTT 365
Query: 61 VRCSNFEEWGHNVRTC 76
+ CSN + GH +C
Sbjct: 366 ITCSNCKNHGHKYTSC 381
>gi|357501113|ref|XP_003620845.1| hypothetical protein MTR_6g091350 [Medicago truncatula]
gi|355495860|gb|AES77063.1| hypothetical protein MTR_6g091350 [Medicago truncatula]
Length = 357
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV--- 61
++ Y + + + WP MLPP + GRP+ +RR+ DE + V
Sbjct: 88 ERCYSYSVSAINGQDMWPIVDAEEMLPPAYKKDPGRPKKLRRRKPDEPKPKHHKRQVGKY 147
Query: 62 RCSNFEEWGHNVRTCK 77
RC+ ++GHN R+CK
Sbjct: 148 RCTKCGDFGHNNRSCK 163
>gi|62319597|dbj|BAD95065.1| putative mudrA protein [Arabidopsis thaliana]
Length = 177
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 2 EALKKTYKHQYYPVPDESRW----PPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
E+ + Y PVP+ R PPE + PP RT GRP+ KK D KR
Sbjct: 101 ESHRLMYAESIQPVPNMDRMMLDDPPEGLVCVTPPPTRRTPGRPKIKKVEPLD---MMKR 157
Query: 58 SSSVRCSNFEEWGHNVRTCK 77
++CS + GHN +TCK
Sbjct: 158 --QLQCSKCKGLGHNKKTCK 175
>gi|358344541|ref|XP_003636347.1| hypothetical protein MTR_038s0011 [Medicago truncatula]
gi|355502282|gb|AES83485.1| hypothetical protein MTR_038s0011 [Medicago truncatula]
Length = 361
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV--- 61
++ Y + + + WP MLPP + GRP+ +RR+ DE + V
Sbjct: 88 ERCYSYSVSAINGQDMWPIVDAEEMLPPAYKKDPGRPKKLRRRKPDEPKPKHHKRQVGKY 147
Query: 62 RCSNFEEWGHNVRTCK 77
RC+ ++GHN R+CK
Sbjct: 148 RCTKCGDFGHNNRSCK 163
>gi|222618342|gb|EEE54474.1| hypothetical protein OsJ_01578 [Oryza sativa Japonica Group]
Length = 416
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQ--TKKRREADENRAFKRSSS 60
A ++ Y+H YPVP W ++ PP ++ GRP+ K E + R ++
Sbjct: 333 AYQRAYQHIIYPVPSSDDWTKTDTPDIDPPKFLKHPGRPKKNMKGGDEPSQPSGRARMTT 392
Query: 61 VRCSNFEEWGHNVRTC 76
+ CSN + GH +C
Sbjct: 393 ITCSNCHKQGHKYTSC 408
>gi|53982305|gb|AAV25284.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 723
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E LK Y Q+ + + W +L Y + P + R GRP+ + R +DE KR
Sbjct: 527 EMLKMAYAGQFKLMASKDEWAHVDLGYKIKKPRLRRKPGRPRVARIRASDETSTSKRK-- 584
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 585 -KCSECHELGHTAKHCQ 600
>gi|4263829|gb|AAD15472.1| Mutator-like transposase [Arabidopsis thaliana]
Length = 241
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKR-READENRAFKRSSS 60
E K Y ++PV W + ++PP GRP+ R R+ E+R ++ S
Sbjct: 121 EKWKLCYSSLFFPVNGMELWKTHIDVVVMPPPDRIMPGRPKNNDRIRDPTEDRPPQKVPS 180
Query: 61 VR------CSNFEEWGHNVRTCK---VDKGSKK 84
R CSN ++ GHN R+CK V K SKK
Sbjct: 181 TREKLQMTCSNCQQIGHNKRSCKRKAVPKPSKK 213
>gi|91774427|ref|YP_544183.1| polynucleotide phosphorylase/polyadenylase [Methylobacillus
flagellatus KT]
gi|123078691|sp|Q1GXD2.1|PNP_METFK RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|91708414|gb|ABE48342.1| 3' exoribonuclease [Methylobacillus flagellatus KT]
Length = 714
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ + EE+G+ +R
Sbjct: 378 LHYNM-PPYATGETGRVGTPKRREIGHGRLAKRALLAVLPSQEEFGYTIR 426
>gi|334902911|gb|AEH25587.1| transposase [Solanum demissum]
Length = 1124
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 6 KTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKR----SSSV 61
+TY + PV + WP + + PP I GRP +++EA E++ + ++
Sbjct: 804 RTYANVLQPVTNMEMWPVSTNPTVAPPEIKSMPGRPGKLRKKEAGESKKSGKLPRTGLAM 863
Query: 62 RCSNFEEWGHNVRTC 76
CSN GHN R C
Sbjct: 864 TCSNCNIRGHNKRGC 878
>gi|30248196|ref|NP_840266.1| polynucleotide phosphorylase/polyadenylase [Nitrosomonas europaea
ATCC 19718]
gi|81584849|sp|Q82XT0.1|PNP_NITEU RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|30180081|emb|CAD84083.1| pnp; polyribonucleotide nucleotidyltransferase protein
[Nitrosomonas europaea ATCC 19718]
Length = 708
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ EE+G+++R
Sbjct: 378 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALLAVIPPVEEFGYSMR 426
>gi|242070711|ref|XP_002450632.1| hypothetical protein SORBIDRAFT_05g008461 [Sorghum bicolor]
gi|241936475|gb|EES09620.1| hypothetical protein SORBIDRAFT_05g008461 [Sorghum bicolor]
Length = 162
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
K Y + P PD + WP EL Y + PP+ R GRP+ + R + E RA V+
Sbjct: 1 FKAAYADRVPPRPDRADWPEVELGYKLHPPLQKRAAGRPRVVRIRGSMEERA--NKKKVK 58
Query: 63 CSNFEEWGHNVRTCKV 78
C + +GH +TCK+
Sbjct: 59 CKRCKGFGHFEKTCKL 74
>gi|427401540|ref|ZP_18892612.1| polyribonucleotide nucleotidyltransferase [Massilia timonae CCUG
45783]
gi|425719649|gb|EKU82581.1| polyribonucleotide nucleotidyltransferase [Massilia timonae CCUG
45783]
Length = 700
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
+HYNM PP TGR T KRRE R KR+ N E++ ++VR
Sbjct: 378 MHYNM-PPFATGETGRVGTPKRREVGHGRLAKRALVAALPNPEDFSYSVR 426
>gi|242039793|ref|XP_002467291.1| hypothetical protein SORBIDRAFT_01g023040 [Sorghum bicolor]
gi|241921145|gb|EER94289.1| hypothetical protein SORBIDRAFT_01g023040 [Sorghum bicolor]
Length = 934
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN----RAFKR 57
EA +TY H PV + WP LPP ++ GRP+T+++RE E + K
Sbjct: 744 EAYMRTYDHVLMPVEGAANWPISDMPRPLPPAYVKMPGRPKTQRKREEWEQPKGVKLSKV 803
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ C + HN R C
Sbjct: 804 GIKMTCRLCGKGDHNSRRC 822
>gi|420253857|ref|ZP_14756891.1| polyribonucleotide nucleotidyltransferase, partial [Burkholderia
sp. BT03]
gi|398050733|gb|EJL43083.1| polyribonucleotide nucleotidyltransferase, partial [Burkholderia
sp. BT03]
Length = 574
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+G+++R
Sbjct: 247 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSAEEFGYSIR 295
>gi|390572973|ref|ZP_10253165.1| polynucleotide phosphorylase/polyadenylase [Burkholderia terrae
BS001]
gi|389935091|gb|EIM97027.1| polynucleotide phosphorylase/polyadenylase [Burkholderia terrae
BS001]
Length = 712
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSAEEFGYSIR 433
>gi|221199652|ref|ZP_03572696.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
CGD2M]
gi|221205448|ref|ZP_03578463.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
CGD2]
gi|221174286|gb|EEE06718.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
CGD2]
gi|221180937|gb|EEE13340.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
CGD2M]
Length = 715
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSAEEFGYSIR 433
>gi|221211731|ref|ZP_03584710.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
CGD1]
gi|221169092|gb|EEE01560.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
CGD1]
Length = 713
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+G+++R
Sbjct: 383 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSAEEFGYSIR 431
>gi|254251858|ref|ZP_04945176.1| Polyribonucleotide nucleotidyltransferase [Burkholderia dolosa
AUO158]
gi|124894467|gb|EAY68347.1| Polyribonucleotide nucleotidyltransferase [Burkholderia dolosa
AUO158]
Length = 722
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+G+++R
Sbjct: 393 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSAEEFGYSIR 441
>gi|161524200|ref|YP_001579212.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
multivorans ATCC 17616]
gi|189351043|ref|YP_001946671.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
multivorans ATCC 17616]
gi|421469587|ref|ZP_15918034.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
ATCC BAA-247]
gi|421478340|ref|ZP_15926103.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
CF2]
gi|226702628|sp|A9AJP0.1|PNP_BURM1 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|160341629|gb|ABX14715.1| Polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
ATCC 17616]
gi|189335065|dbj|BAG44135.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
ATCC 17616]
gi|400224933|gb|EJO55128.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
CF2]
gi|400229438|gb|EJO59286.1| polyribonucleotide nucleotidyltransferase [Burkholderia multivorans
ATCC BAA-247]
Length = 715
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSAEEFGYSIR 433
>gi|357492489|ref|XP_003616533.1| hypothetical protein MTR_5g081480 [Medicago truncatula]
gi|355517868|gb|AES99491.1| hypothetical protein MTR_5g081480 [Medicago truncatula]
Length = 939
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 8 YKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREA-----DENRAFKRSSSVR 62
Y YP +S W + ++ PP I + GRP+ K+ +EA D+ + + ++
Sbjct: 701 YSSVIYPANGQSLWKRTDYNDLQPPPIRKQPGRPKKKRNKEAHELVKDDTQMRRARWGMK 760
Query: 63 CSNFEEWGHNVRTCKV 78
CS ++ GHN TCK+
Sbjct: 761 CSRCKQSGHNKSTCKL 776
>gi|82703668|ref|YP_413234.1| polynucleotide phosphorylase/polyadenylase [Nitrosospira
multiformis ATCC 25196]
gi|123740603|sp|Q2Y5X9.1|PNP_NITMU RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|82411733|gb|ABB75842.1| 3' exoribonuclease [Nitrosospira multiformis ATCC 25196]
Length = 701
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ + EE+G+++R
Sbjct: 377 LHYNM-PPYATGETGRVGTPKRREIGHGRLAKRALVAVLPSPEEFGYSLR 425
>gi|115469058|ref|NP_001058128.1| Os06g0632700 [Oryza sativa Japonica Group]
gi|113596168|dbj|BAF20042.1| Os06g0632700 [Oryza sativa Japonica Group]
gi|215704898|dbj|BAG94926.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 722
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPELHYNMLPPII----IRTTGRPQTKKRREADENRAFK 56
E + TY P+PD P L P+ IRT R K + AD A K
Sbjct: 639 TECYRLTYSMSINPIPDVMLPPAILSDQSQSPVTHATPIRTRRRVGRPKEKPADPRIAIK 698
Query: 57 RSSSVRCSNFEEWGHNVRTCKV 78
R+ VRCS + +GHN TCKV
Sbjct: 699 RA--VRCSRCQGYGHNKATCKV 718
>gi|125602793|gb|EAZ42118.1| hypothetical protein OsJ_26677 [Oryza sativa Japonica Group]
Length = 656
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE-----NRAFKR 57
A ++ Y+H Y VP W ++ PP + G P+ +R+ DE RA R
Sbjct: 502 AYQRAYQHSIYHVPSSDDWTKTDTPDIDPPKFSKHPGMPKNNRRKRGDEPSQPSGRA--R 559
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+++ CSN + GH +C
Sbjct: 560 MTTITCSNCHKQGHKCTSC 578
>gi|115489412|ref|NP_001067193.1| Os12g0597300 [Oryza sativa Japonica Group]
gi|77556405|gb|ABA99201.1| transposon protein, putative, Mutator sub-class, expressed [Oryza
sativa Japonica Group]
gi|113649700|dbj|BAF30212.1| Os12g0597300 [Oryza sativa Japonica Group]
gi|125579958|gb|EAZ21104.1| hypothetical protein OsJ_36747 [Oryza sativa Japonica Group]
Length = 749
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 5 KKTYKHQYYPVPDESRWPP----------ELHYNMLPPIIIRTTGRPQTKKRREADENRA 54
+KTY +P+PD++ W ++ + PP +R GRP+ K+ R D R
Sbjct: 667 RKTYSQTIHPIPDKTLWNETSDQGQEEENKVDVIINPPKSLRPPGRPRKKRIRAEDRGR- 725
Query: 55 FKRSSSVRCSNFEEWGHNVRTC 76
KR V CS + GH TC
Sbjct: 726 IKR--VVHCSRCNQTGHFRTTC 745
>gi|407712803|ref|YP_006833368.1| polyribonucleotide nucleotidyltransferase [Burkholderia
phenoliruptrix BR3459a]
gi|407234987|gb|AFT85186.1| polyribonucleotide nucleotidyltransferase [Burkholderia
phenoliruptrix BR3459a]
Length = 713
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + + +E+G+++R
Sbjct: 383 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAACLPSADEFGYSIR 431
>gi|359488047|ref|XP_003633694.1| PREDICTED: uncharacterized protein LOC100241533 [Vitis vinifera]
Length = 734
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYN---MLPPIIIRTTGRPQTKKRREADENRAFKRS 58
+AL +Y YP +E W H +LPP R TGRP+ + E KR+
Sbjct: 657 KALLSSYSECIYPTGNEIDWVVPNHIRDKVVLPPKTRRPTGRPRKVRIPSGGEG---KRT 713
Query: 59 SSVRCSNFEEWGHNVRTCK 77
S RCS ++GHN +TCK
Sbjct: 714 S--RCSRCGQYGHNRKTCK 730
>gi|385203227|ref|ZP_10030097.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp. Ch1-1]
gi|385183118|gb|EIF32392.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp. Ch1-1]
Length = 716
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAACLPSADEFGYSIR 433
>gi|307730344|ref|YP_003907568.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp.
CCGE1003]
gi|307584879|gb|ADN58277.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp.
CCGE1003]
Length = 715
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAACLPSADEFGYSIR 433
>gi|323525432|ref|YP_004227585.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp.
CCGE1001]
gi|323382434|gb|ADX54525.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp.
CCGE1001]
Length = 715
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAACLPSADEFGYSIR 433
>gi|170691678|ref|ZP_02882842.1| Polyribonucleotide nucleotidyltransferase [Burkholderia graminis
C4D1M]
gi|170142962|gb|EDT11126.1| Polyribonucleotide nucleotidyltransferase [Burkholderia graminis
C4D1M]
Length = 715
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAACLPSADEFGYSIR 433
>gi|187923336|ref|YP_001894978.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
phytofirmans PsJN]
gi|226702630|sp|B2T2E3.1|PNP_BURPP RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|187714530|gb|ACD15754.1| Polyribonucleotide nucleotidyltransferase [Burkholderia
phytofirmans PsJN]
Length = 718
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAACLPSADEFGYSIR 433
>gi|91782608|ref|YP_557814.1| polynucleotide phosphorylase [Burkholderia xenovorans LB400]
gi|122970578|sp|Q142H7.1|PNP_BURXL RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|91686562|gb|ABE29762.1| Putative polyribonucleotide nucleotidyltransferase [Burkholderia
xenovorans LB400]
Length = 716
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAACLPSADEFGYSIR 433
>gi|242089775|ref|XP_002440720.1| hypothetical protein SORBIDRAFT_09g005600 [Sorghum bicolor]
gi|241946005|gb|EES19150.1| hypothetical protein SORBIDRAFT_09g005600 [Sorghum bicolor]
Length = 815
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV 61
+A KKTY H P+ WP PP ++ GRP+T++RRE E + S V
Sbjct: 664 DAYKKTYAHVLQPIEGLDNWPTTNMPRPEPPAFVKKPGRPKTERRREQGEEPKGTKLSRV 723
Query: 62 ----RCSNFEEWGHNVRTC 76
RC HN R C
Sbjct: 724 GIKMRCRICGTTWHNSRRC 742
>gi|242084056|ref|XP_002442453.1| hypothetical protein SORBIDRAFT_08g020220 [Sorghum bicolor]
gi|241943146|gb|EES16291.1| hypothetical protein SORBIDRAFT_08g020220 [Sorghum bicolor]
Length = 759
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 18/87 (20%)
Query: 5 KKTYKHQYYPVPDESRW-------------PPELHYNML--PPIIIRTTGRPQTKKRREA 49
+KTY +P+PD++ W E M+ PP +R GRP+ K+ R
Sbjct: 672 RKTYSQTIHPIPDKTLWNETADHEVADQGQAEETKMEMVINPPKSLRPPGRPRKKRIRAE 731
Query: 50 DENRAFKRSSSVRCSNFEEWGHNVRTC 76
D R KR V CS + GH TC
Sbjct: 732 DRGRV-KR--VVHCSRCNQTGHFRTTC 755
>gi|357139057|ref|XP_003571102.1| PREDICTED: uncharacterized protein LOC100835418 [Brachypodium
distachyon]
Length = 720
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 1 NEALKKTYKHQYYPVPD----ESRWPPELHYNMLP-PIIIR-TTGRPQTKKRREADENRA 54
E + TY P+PD + P ++P PI+ R GRP K + AD A
Sbjct: 638 TECYRMTYAMSINPIPDVMVPSASTDPSQSGGLVPCPILTRRQVGRP---KEKPADPRIA 694
Query: 55 FKRSSSVRCSNFEEWGHNVRTCKV 78
KR+ VRCS + +GHN TCKV
Sbjct: 695 IKRA--VRCSRCKGYGHNKATCKV 716
>gi|125537276|gb|EAY83764.1| hypothetical protein OsI_38982 [Oryza sativa Indica Group]
Length = 747
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 5 KKTYKHQYYPVPDESRWPP----------ELHYNMLPPIIIRTTGRPQTKKRREADENRA 54
+KTY +P+PD++ W ++ + PP +R GRP+ K+ R D R
Sbjct: 665 RKTYSQTIHPIPDKTLWNETSDQGQEEENKVDVIINPPKSLRPPGRPRKKRIRAEDRGR- 723
Query: 55 FKRSSSVRCSNFEEWGHNVRTC 76
KR V CS + GH TC
Sbjct: 724 IKR--VVHCSRCNQTGHFRTTC 743
>gi|356510724|ref|XP_003524085.1| PREDICTED: uncharacterized protein LOC100814876 [Glycine max]
Length = 1392
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAF-----K 56
EA KTY+H PV W + + +PP GRP+ +RR DE+ +
Sbjct: 1216 EAYNKTYQHFIEPVQGPQYWAQTQYTHPVPPHKKVQRGRPKKNRRRSVDEDNVTGHKLKR 1275
Query: 57 RSSSVRCSNFEEWGHNVRTCK 77
+ + C + HN+R+CK
Sbjct: 1276 KLAEFTCGRCGQTNHNIRSCK 1296
>gi|218189615|gb|EEC72042.1| hypothetical protein OsI_04947 [Oryza sativa Indica Group]
Length = 768
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 14 PVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSSSVRCSNFEEW 69
PV + WP + + P I+ GRP+T++RRE +E +A K + +RC + ++
Sbjct: 557 PVEGMTSWPDDPREPLNAPGYIKMPGRPKTERRREPNEPAKPTKASKFGTIMRCRSCKQP 616
Query: 70 GHNVRTCKVDKGS 82
GHN + C G+
Sbjct: 617 GHNSKGCHKHSGA 629
>gi|357116428|ref|XP_003559983.1| PREDICTED: uncharacterized protein LOC100822691 [Brachypodium
distachyon]
Length = 562
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRR---EADENRAFKRS 58
+A K Y P D+ W ++ PP+ + GRP K+++ E +E+R R
Sbjct: 315 DAFKLAYAEVIMPCRDKREWQKMGGCHVEPPVYTKVVGRPSLKRKKNPLEEEEDRRMSRH 374
Query: 59 SSV-RCSNFEEWGHNVRTC 76
+V CS F HN R C
Sbjct: 375 GAVSHCSVFHSVQHNKRRC 393
>gi|357118292|ref|XP_003560890.1| PREDICTED: uncharacterized protein LOC100836603 [Brachypodium
distachyon]
Length = 967
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 8 YKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAF----KRSSSVRC 63
YK YPVP + W ++ PPI + GR + +R+ DE R +S C
Sbjct: 787 YKLLVYPVPSKHAWTKTASPDIDPPIFLNYLGRRKKNRRKGTDEKAKVPVGKGRMTSSTC 846
Query: 64 SNFEEWGHNVRTC 76
SN GH +C
Sbjct: 847 SNCHLQGHKYTSC 859
>gi|147778024|emb|CAN65285.1| hypothetical protein VITISV_042737 [Vitis vinifera]
Length = 560
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYN---MLPPIIIRTTGRPQTKKRREADENRAFKRS 58
+AL +Y YP +E W H +LPP R TGRP+ + E KR+
Sbjct: 483 KALLSSYSECIYPNGNEIDWVVPNHIRDKVVLPPKTRRPTGRPRKVRILSGGEG---KRT 539
Query: 59 SSVRCSNFEEWGHNVRTCK 77
S RCS ++GHN +TCK
Sbjct: 540 S--RCSRCGQYGHNRKTCK 556
>gi|445498215|ref|ZP_21465070.1| polyribonucleotide nucleotidyltransferase Pnp [Janthinobacterium
sp. HH01]
gi|444788210|gb|ELX09758.1| polyribonucleotide nucleotidyltransferase Pnp [Janthinobacterium
sp. HH01]
Length = 707
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ + EE+ ++VR
Sbjct: 383 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALIAALPSPEEFSYSVR 431
>gi|359488303|ref|XP_002275053.2| PREDICTED: uncharacterized protein LOC100256986 [Vitis vinifera]
Length = 1111
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYN---MLPPIIIRTTGRPQTKKRREADENRAFKRSS 59
AL +Y YP +E W H +LPP R TGRP+ + E KR+S
Sbjct: 1035 ALLSSYSECIYPTGNEIDWVVPNHIRDKVVLPPKTRRPTGRPRKVRIPSGGEG---KRTS 1091
Query: 60 SVRCSNFEEWGHNVRTCK 77
RCS ++GHN +TCK
Sbjct: 1092 --RCSRCGQYGHNRKTCK 1107
>gi|147789349|emb|CAN62351.1| hypothetical protein VITISV_004945 [Vitis vinifera]
Length = 684
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYN---MLPPIIIRTTGRPQTKKRREADENRAFKRS 58
+AL +Y YP +E W H +LPP R TGRP+ + E +
Sbjct: 607 KALLSSYSECIYPTGNEIDWVVPNHIRDKVVLPPKTRRPTGRPRKVRISSGGEGK----- 661
Query: 59 SSVRCSNFEEWGHNVRTCK 77
+ RCS ++GHN +TCK
Sbjct: 662 HTSRCSRCGQYGHNRKTCK 680
>gi|218193141|gb|EEC75568.1| hypothetical protein OsI_12245 [Oryza sativa Indica Group]
Length = 707
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
++ K+ Y PV D++ W + PP+ + GRP+T +R++ E + K
Sbjct: 543 QSFKQAYMFNIMPVRDKTHWEKMNGVPVNPPVYEKKVGRPKTTRRKQPQELDAGTKISKH 602
Query: 58 SSSVRCSNFEEWGHNVRTCKVDKGSK 83
+ C + GHN + CK K ++
Sbjct: 603 GVQIHCCYCKNVGHNKKGCKKRKAAQ 628
>gi|218197949|gb|EEC80376.1| hypothetical protein OsI_22491 [Oryza sativa Indica Group]
Length = 513
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
+ Y P+PD+S W + + + PPI+ R+ GRP+T++ +E + K+ +
Sbjct: 324 FRAAYATIVPPMPDKSLWEKVDAGFKIWPPILKRSAGRPRTRRFIGVEEGGSGKKRR--K 381
Query: 63 CSNFEEWGHNVRTC 76
C + +GH +TC
Sbjct: 382 CERWNGFGHLSKTC 395
>gi|147815191|emb|CAN74432.1| hypothetical protein VITISV_040275 [Vitis vinifera]
Length = 855
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 2 EALKKTYKHQYYPVPDESRWP----PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
+A + Y Q+ P+P E+ WP P +H N P ++R GRP+ R R +
Sbjct: 776 DAYESCYTPQFNPIPHEAYWPTFDFPVVHSN---PTLLRRKGRPRLSMIRNEIGQR--ES 830
Query: 58 SSSVRCSNFEEWGHNVRTC 76
S + C ++ GHN R C
Sbjct: 831 SGKIWCGICKQEGHNRRKC 849
>gi|242057077|ref|XP_002457684.1| hypothetical protein SORBIDRAFT_03g011625 [Sorghum bicolor]
gi|241929659|gb|EES02804.1| hypothetical protein SORBIDRAFT_03g011625 [Sorghum bicolor]
Length = 654
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV- 61
A KKTY H P+ WP P ++ GRP+T++RRE E + S V
Sbjct: 536 AYKKTYAHVLQPIEGPDNWPIANMPRPEPRAFVKKPGRPKTERRREQGEEPKGTKLSRVG 595
Query: 62 ---RCSNFEEWGHNVRTC 76
RC GHN R C
Sbjct: 596 IKMRCRICGTTGHNSRRC 613
>gi|395763186|ref|ZP_10443855.1| polynucleotide phosphorylase/polyadenylase [Janthinobacterium
lividum PAMC 25724]
Length = 705
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ EE+ ++VR
Sbjct: 383 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALIAALPAAEEFSYSVR 431
>gi|218192701|gb|EEC75128.1| hypothetical protein OsI_11314 [Oryza sativa Indica Group]
Length = 819
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRS 58
A TY+H PV WP + P ++ GRP+ ++RRE E + K
Sbjct: 734 AFMSTYEHCLEPVEGIHSWPISKRSKPVAPPYVKMPGRPKKERRREPHEKPKATKVSKVG 793
Query: 59 SSVRCSNFEEWGHNVRTC 76
+ +RC + GHN TC
Sbjct: 794 TIIRCRRCKGIGHNKTTC 811
>gi|449527456|ref|XP_004170727.1| PREDICTED: uncharacterized protein LOC101232672 [Cucumis sativus]
Length = 152
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
NE L Y YPV ++ W +H +LP +++ GRP KK+R A K
Sbjct: 65 NECLLAAYSDVVYPVGNQLEWKTSEEYVHMTVLPSKVVKRVGRP--KKKRIPSVGEAPKL 122
Query: 58 SSSVRCSNFEEWGHNVRTC 76
RC +E GHN TC
Sbjct: 123 HKYGRC---KEIGHNRLTC 138
>gi|242061552|ref|XP_002452065.1| hypothetical protein SORBIDRAFT_04g018080 [Sorghum bicolor]
gi|241931896|gb|EES05041.1| hypothetical protein SORBIDRAFT_04g018080 [Sorghum bicolor]
Length = 614
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE 51
EA KKTY H P+ WP PP ++ GRP+T++RRE E
Sbjct: 550 EAYKKTYAHVLQPIEGPDNWPTANMPRPEPPAFVKKPGRPKTERRREQGE 599
>gi|339483022|ref|YP_004694808.1| Polyribonucleotide nucleotidyltransferase [Nitrosomonas sp. Is79A3]
gi|338805167|gb|AEJ01409.1| Polyribonucleotide nucleotidyltransferase [Nitrosomonas sp. Is79A3]
Length = 706
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP GR T KRRE R KR+ + + EE+G+++R
Sbjct: 378 LHYNM-PPYATGEIGRVGTPKRREIGHGRLAKRAIAAVLPSPEEFGYSLR 426
>gi|399020444|ref|ZP_10722574.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum sp.
CF444]
gi|398094859|gb|EJL85213.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum sp.
CF444]
Length = 712
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ EE+ ++VR
Sbjct: 383 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALIAALPPAEEFSYSVR 431
>gi|218193169|gb|EEC75596.1| hypothetical protein OsI_12298 [Oryza sativa Indica Group]
Length = 517
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 15 VPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNV 73
+PD+S W + + M PPI+ R+ GRP+T+K +E + K+ RC +GH
Sbjct: 1 MPDKSLWEKVDTGFKMWPPILKRSAGRPRTRKFIGVEEGGSGKKRR--RCKRCHGFGHLQ 58
Query: 74 RTC 76
+TC
Sbjct: 59 KTC 61
>gi|356541870|ref|XP_003539395.1| PREDICTED: uncharacterized protein LOC100813614 [Glycine max]
Length = 413
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 6 KTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRA---FKRSSS-V 61
K Y+H + WP ++LPP + GRP+ +RRE DE + ++R+ +
Sbjct: 334 KCYEHAITAINGPINWPETPAESILPPEYKQGVGRPKKLRRREPDEEPSATKYRRTCTKK 393
Query: 62 RCSNFEEWGHNVRTCKV 78
+C E GHNV C V
Sbjct: 394 KCGRCREVGHNVGKCPV 410
>gi|293337036|ref|NP_001168705.1| uncharacterized protein LOC100382497 [Zea mays]
gi|223950329|gb|ACN29248.1| unknown [Zea mays]
gi|224030155|gb|ACN34153.1| unknown [Zea mays]
Length = 751
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 5 KKTYKHQYYPVPDESRWPP-----ELHYNML--PPIIIRTTGRPQTKKRREADENRAFKR 57
+KTY +P+PD + W ++ M+ PP +R +P+ K+ R D R KR
Sbjct: 672 RKTYSQTIHPIPDRTLWDETADQGQVKVEMIINPPKSLRPAAQPRKKRVRAEDRGRV-KR 730
Query: 58 SSSVRCSNFEEWGHNVRTC 76
V CS + GH TC
Sbjct: 731 --VVHCSRCNQTGHFRTTC 747
>gi|269467861|gb|EEZ79604.1| Polyribonucleotide nucleotidyltransferase [uncultured SUP05 cluster
bacterium]
Length = 697
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + TGR T KRRE R +R S EE+ + +R
Sbjct: 382 LHYN-FPPYCVGETGRVGTTKRREIGHGRLARRGISACLPTIEEYPYTIR 430
>gi|125547651|gb|EAY93473.1| hypothetical protein OsI_15274 [Oryza sativa Indica Group]
Length = 201
Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 8 YKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNF 66
Y+ P+ D+S+ P + + MLPP + R+ GR T+ R + + RC+
Sbjct: 3 YERSITPIGDKSQVPKVDPGFKMLPPKLGRSAGR--TRTTRIPNSGEGCTKKGRKRCARC 60
Query: 67 EEWGHNVRTCK 77
E+GH+ + CK
Sbjct: 61 HEFGHHAKGCK 71
>gi|83718859|ref|YP_441610.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
thailandensis E264]
gi|167580418|ref|ZP_02373292.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
thailandensis TXDOH]
gi|257139694|ref|ZP_05587956.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
thailandensis E264]
gi|123726649|sp|Q2SZN9.1|PNP_BURTA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|83652684|gb|ABC36747.1| polyribonucleotide nucleotidyltransferase [Burkholderia
thailandensis E264]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|424902717|ref|ZP_18326233.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
thailandensis MSMB43]
gi|390933092|gb|EIP90492.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
thailandensis MSMB43]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|377821149|ref|YP_004977520.1| polynucleotide phosphorylase/polyadenylase [Burkholderia sp. YI23]
gi|357935984|gb|AET89543.1| polynucleotide phosphorylase/polyadenylase [Burkholderia sp. YI23]
Length = 717
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 388 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 436
>gi|416939635|ref|ZP_11934390.1| polynucleotide phosphorylase/polyadenylase [Burkholderia sp. TJI49]
gi|325524616|gb|EGD02631.1| polynucleotide phosphorylase/polyadenylase [Burkholderia sp. TJI49]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 383 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 431
>gi|295676033|ref|YP_003604557.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp.
CCGE1002]
gi|295435876|gb|ADG15046.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp.
CCGE1002]
Length = 711
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|238028147|ref|YP_002912378.1| polynucleotide phosphorylase/polyadenylase [Burkholderia glumae
BGR1]
gi|237877341|gb|ACR29674.1| Polyribonucleotide nucleotidyltransferase [Burkholderia glumae
BGR1]
Length = 709
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|209518519|ref|ZP_03267340.1| Polyribonucleotide nucleotidyltransferase [Burkholderia sp. H160]
gi|209501064|gb|EEA01099.1| Polyribonucleotide nucleotidyltransferase [Burkholderia sp. H160]
Length = 711
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|254195065|ref|ZP_04901494.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei S13]
gi|169651813|gb|EDS84506.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei S13]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|167836045|ref|ZP_02462928.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
thailandensis MSMB43]
Length = 706
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 378 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 426
>gi|167618527|ref|ZP_02387158.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
thailandensis Bt4]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|167562173|ref|ZP_02355089.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
oklahomensis EO147]
gi|167569418|ref|ZP_02362292.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
oklahomensis C6786]
Length = 714
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|254298529|ref|ZP_04965981.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 406e]
gi|157808347|gb|EDO85517.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 406e]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|37700327|gb|AAR00617.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709800|gb|ABF97595.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 981
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRA------FK 56
A K Y P D++ W +LPP+ + GRP+ +R++ E + K
Sbjct: 771 AFKAVYAENIIPCNDKANWEKMNGPQILPPVYEKKVGRPKKSRRKQPQEVQGRNGPKLTK 830
Query: 57 RSSSVRCSNFEEWGHNVRTCKVDK 80
++ CS E HN + C++ K
Sbjct: 831 HGVTIHCSYCHEANHNKKGCELRK 854
>gi|254181191|ref|ZP_04887788.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 1655]
gi|184211729|gb|EDU08772.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 1655]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|53725829|ref|YP_103438.1| polynucleotide phosphorylase [Burkholderia mallei ATCC 23344]
gi|67642196|ref|ZP_00440956.1| polyribonucleotide nucleotidyltransferase
(Polynucleotidephosphorylase) (PNPase) [Burkholderia
mallei GB8 horse 4]
gi|121601052|ref|YP_992465.1| polynucleotide phosphorylase/polyadenylase [Burkholderia mallei
SAVP1]
gi|124384993|ref|YP_001026732.1| polynucleotide phosphorylase [Burkholderia mallei NCTC 10229]
gi|126449416|ref|YP_001079983.1| polynucleotide phosphorylase [Burkholderia mallei NCTC 10247]
gi|167000372|ref|ZP_02266190.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei
PRL-20]
gi|254175718|ref|ZP_04882378.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei ATCC
10399]
gi|254202114|ref|ZP_04908477.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei FMH]
gi|254207444|ref|ZP_04913794.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei JHU]
gi|254359866|ref|ZP_04976136.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei
2002721280]
gi|81604650|sp|Q62IN1.1|PNP_BURMA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|187470944|sp|A3MI97.1|PNP_BURM7 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|187470945|sp|A2S463.1|PNP_BURM9 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|187470946|sp|A1V2L2.1|PNP_BURMS RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|52429252|gb|AAU49845.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei ATCC
23344]
gi|121229862|gb|ABM52380.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei
SAVP1]
gi|124293013|gb|ABN02282.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei NCTC
10229]
gi|126242286|gb|ABO05379.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei NCTC
10247]
gi|147746361|gb|EDK53438.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei FMH]
gi|147751338|gb|EDK58405.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei JHU]
gi|148029106|gb|EDK87011.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei
2002721280]
gi|160696762|gb|EDP86732.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei ATCC
10399]
gi|238523292|gb|EEP86731.1| polyribonucleotide nucleotidyltransferase
(Polynucleotidephosphorylase) (PNPase) [Burkholderia
mallei GB8 horse 4]
gi|243063706|gb|EES45892.1| polyribonucleotide nucleotidyltransferase [Burkholderia mallei
PRL-20]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|53718843|ref|YP_107829.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei K96243]
gi|76810240|ref|YP_332840.1| polynucleotide phosphorylase [Burkholderia pseudomallei 1710b]
gi|126439036|ref|YP_001058334.1| polynucleotide phosphorylase [Burkholderia pseudomallei 668]
gi|126454918|ref|YP_001065573.1| polynucleotide phosphorylase [Burkholderia pseudomallei 1106a]
gi|134283923|ref|ZP_01770619.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 305]
gi|167718839|ref|ZP_02402075.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei DM98]
gi|167737848|ref|ZP_02410622.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 14]
gi|167815032|ref|ZP_02446712.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 91]
gi|167823448|ref|ZP_02454919.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 9]
gi|167845000|ref|ZP_02470508.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei B7210]
gi|167893541|ref|ZP_02480943.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 7894]
gi|167901988|ref|ZP_02489193.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei NCTC 13177]
gi|167910223|ref|ZP_02497314.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 112]
gi|167918256|ref|ZP_02505347.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei BCC215]
gi|217419798|ref|ZP_03451304.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 576]
gi|226195372|ref|ZP_03790961.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei Pakistan 9]
gi|237811578|ref|YP_002896029.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei MSHR346]
gi|242315054|ref|ZP_04814070.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 1106b]
gi|254190554|ref|ZP_04897061.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei Pasteur 52237]
gi|254258157|ref|ZP_04949211.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 1710a]
gi|386862398|ref|YP_006275347.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 1026b]
gi|403518000|ref|YP_006652133.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei BPC006]
gi|418389928|ref|ZP_12967744.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 354a]
gi|418538035|ref|ZP_13103663.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 1026a]
gi|418541532|ref|ZP_13107010.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 1258a]
gi|418547776|ref|ZP_13112914.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 1258b]
gi|418553957|ref|ZP_13118757.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 354e]
gi|81380050|sp|Q63VN7.1|PNP_BURPS RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|123599745|sp|Q3JUB3.1|PNP_BURP1 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|187470947|sp|A3NTA2.1|PNP_BURP0 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|187470948|sp|A3N7L3.1|PNP_BURP6 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|52209257|emb|CAH35202.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei K96243]
gi|76579693|gb|ABA49168.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 1710b]
gi|126218529|gb|ABN82035.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 668]
gi|126228560|gb|ABN92100.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 1106a]
gi|134244712|gb|EBA44810.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 305]
gi|157938229|gb|EDO93899.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei Pasteur 52237]
gi|217397102|gb|EEC37118.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 576]
gi|225932574|gb|EEH28572.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei Pakistan 9]
gi|237503430|gb|ACQ95748.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei MSHR346]
gi|242138293|gb|EES24695.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 1106b]
gi|254216846|gb|EET06230.1| polyribonucleotide nucleotidyltransferase [Burkholderia
pseudomallei 1710a]
gi|385348795|gb|EIF55391.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 1026a]
gi|385357695|gb|EIF63735.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 1258a]
gi|385359817|gb|EIF65767.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 1258b]
gi|385370904|gb|EIF76126.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 354e]
gi|385375882|gb|EIF80619.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 354a]
gi|385659526|gb|AFI66949.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei 1026b]
gi|403073643|gb|AFR15223.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
pseudomallei BPC006]
Length = 713
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 433
>gi|413958296|ref|ZP_11397535.1| polynucleotide phosphorylase/polyadenylase [Burkholderia sp. SJ98]
gi|413940876|gb|EKS72836.1| polynucleotide phosphorylase/polyadenylase [Burkholderia sp. SJ98]
Length = 712
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + +E+G+++R
Sbjct: 383 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVACLPSADEFGYSIR 431
>gi|222624818|gb|EEE58950.1| hypothetical protein OsJ_10628 [Oryza sativa Japonica Group]
Length = 781
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRS 58
A TY+H P+ WP + P ++ GRP+ ++RRE E R K
Sbjct: 696 AFMSTYEHCLEPMEGIHIWPISKRSKPVAPPYVKMPGRPKKERRREPHEKPKATRVSKVG 755
Query: 59 SSVRCSNFEEWGHNVRTC 76
+ +RC + GHN TC
Sbjct: 756 TIIRCRRCKGIGHNKTTC 773
>gi|297722073|ref|NP_001173400.1| Os03g0317200 [Oryza sativa Japonica Group]
gi|108707832|gb|ABF95627.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
gi|255674462|dbj|BAH92128.1| Os03g0317200 [Oryza sativa Japonica Group]
Length = 787
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRS 58
A TY+H P+ WP + P ++ GRP+ ++RRE E R K
Sbjct: 702 AFMSTYEHCLEPMEGIHIWPISKRSKPVAPPYVKMPGRPKKERRREPHEKPKATRVSKVG 761
Query: 59 SSVRCSNFEEWGHNVRTC 76
+ +RC + GHN TC
Sbjct: 762 TIIRCRRCKGIGHNKTTC 779
>gi|18087533|gb|AAL58900.1|AF462806_1 AT3g06940/F17A9_9 [Arabidopsis thaliana]
gi|17380908|gb|AAL36266.1| putative mudrA protein [Arabidopsis thaliana]
gi|20855902|gb|AAM26637.1| AT3g06940/F17A9_9 [Arabidopsis thaliana]
gi|28393919|gb|AAO42367.1| putative mudrA protein [Arabidopsis thaliana]
Length = 749
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 2 EALKKTYKHQYYPVPDESRW----PPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
E+ + Y PVP+ R PPE + PP RT GRP+ KK D KR
Sbjct: 673 ESHRLMYAESIQPVPNMDRMMLDDPPEGLVCVTPPPTRRTPGRPKIKKVEPLD---MMKR 729
Query: 58 SSSVRCSNFEEWGHNVRTCK 77
++CS + GHN +TCK
Sbjct: 730 --QLQCSKCKGLGHNKKTCK 747
>gi|77555706|gb|ABA98502.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 760
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
+A TY+H PV WP P ++ GRP+ ++RRE E R K
Sbjct: 656 KAFMSTYEHCLEPVEGIHSWPVSKRPKPAAPPYVKMPGRPKKERRREPHEKPKATRVSKV 715
Query: 58 SSSVRCSNFEEWGHNVRTC 76
+ +RC + GHN TC
Sbjct: 716 GTIIRCRRCKGIGHNKTTC 734
>gi|222635372|gb|EEE65504.1| hypothetical protein OsJ_20937 [Oryza sativa Japonica Group]
Length = 462
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
+ Y P+PD+S W + + + PPI+ R+ GRP+T++ +E + K+ +
Sbjct: 273 FRAAYATIVPPMPDKSLWEKVDAGFKIWPPILKRSAGRPRTRRFIGVEEGGSRKKRR--K 330
Query: 63 CSNFEEWGHNVRTC 76
C + +GH +TC
Sbjct: 331 CERWNGFGHLSKTC 344
>gi|449526924|ref|XP_004170463.1| PREDICTED: uncharacterized protein LOC101232338, partial [Cucumis
sativus]
Length = 221
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQTKK 45
NE L Y YPV ++S W +H +LPP +++ GRP+ K+
Sbjct: 132 NECLLAAYSEAIYPVGNQSEWKTSEEYVHMTVLPPKVVKRVGRPKKKR 179
>gi|222617080|gb|EEE53212.1| hypothetical protein OsJ_36100 [Oryza sativa Japonica Group]
Length = 783
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRS 58
A TY+H PV WP P ++ GRP+ ++RRE E R K
Sbjct: 680 AFMSTYEHCLEPVEGIHSWPVSKRPKPAAPPYVKMPGRPKKERRREPHEKPKATRVSKVG 739
Query: 59 SSVRCSNFEEWGHNVRTC 76
+ +RC + GHN TC
Sbjct: 740 TIIRCRRCKGIGHNKTTC 757
>gi|125538436|gb|EAY84831.1| hypothetical protein OsI_06197 [Oryza sativa Indica Group]
Length = 638
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE--------LHYNMLPPIIIRTTGRPQTKKRREADEN 52
E + TY P+PD P LH + P + R GRP K + AD
Sbjct: 556 TECYRLTYAMSINPIPDIVVAAPSTDPSQGAALHQS--PILTRRQVGRP---KEKPADPR 610
Query: 53 RAFKRSSSVRCSNFEEWGHNVRTCKV 78
A KR+ VRCS + +GHN TCKV
Sbjct: 611 IAIKRA--VRCSRCKGYGHNKATCKV 634
>gi|115444765|ref|NP_001046162.1| Os02g0192200 [Oryza sativa Japonica Group]
gi|113535693|dbj|BAF08076.1| Os02g0192200 [Oryza sativa Japonica Group]
gi|125581125|gb|EAZ22056.1| hypothetical protein OsJ_05714 [Oryza sativa Japonica Group]
gi|215678777|dbj|BAG95214.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704861|dbj|BAG94889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 720
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 2 EALKKTYKHQYYPVPDESRWPPE--------LHYNMLPPIIIRTTGRPQTKKRREADENR 53
E + TY P+PD P LH + P + R GRP K + AD
Sbjct: 639 ECYRLTYAMSINPIPDIVVAAPSTDPSQGEALHQS--PILTRRQVGRP---KEKPADPRI 693
Query: 54 AFKRSSSVRCSNFEEWGHNVRTCKV 78
A KR+ VRCS + +GHN TCKV
Sbjct: 694 AIKRA--VRCSRCKGYGHNKATCKV 716
>gi|356507115|ref|XP_003522316.1| PREDICTED: uncharacterized protein LOC100819108 [Glycine max]
Length = 309
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAF-----K 56
EA KTY H PV W H ++PP GRP+ +RR DE+ +
Sbjct: 60 EAYNKTYHHFIEPVQGPQYWAQYTH--LVPPHKRVQRGRPKKNRRRSVDEDNVTGHKLKR 117
Query: 57 RSSSVRCSNFEEWGHNVRTCK 77
+ + C + HN+R CK
Sbjct: 118 KLAEFTCGRCGQTNHNIRICK 138
>gi|78067050|ref|YP_369819.1| polynucleotide phosphorylase [Burkholderia sp. 383]
gi|123742554|sp|Q39EE1.1|PNP_BURS3 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|77967795|gb|ABB09175.1| 3' exoribonuclease [Burkholderia sp. 383]
Length = 715
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|402565951|ref|YP_006615296.1| polynucleotide phosphorylase/polyadenylase [Burkholderia cepacia
GG4]
gi|402247148|gb|AFQ47602.1| polynucleotide phosphorylase/polyadenylase [Burkholderia cepacia
GG4]
Length = 715
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|387902797|ref|YP_006333136.1| polyribonucleotide nucleotidyltransferase [Burkholderia sp. KJ006]
gi|387577689|gb|AFJ86405.1| Polyribonucleotide nucleotidyltransferase [Burkholderia sp. KJ006]
Length = 713
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 383 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 431
>gi|206560707|ref|YP_002231472.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
cenocepacia J2315]
gi|421867939|ref|ZP_16299591.1| Polyribonucleotide nucleotidyltransferase [Burkholderia cenocepacia
H111]
gi|444359660|ref|ZP_21160957.1| polyribonucleotide nucleotidyltransferase [Burkholderia cenocepacia
BC7]
gi|444369262|ref|ZP_21169023.1| polyribonucleotide nucleotidyltransferase [Burkholderia cenocepacia
K56-2Valvano]
gi|257096670|sp|B4E5M6.1|PNP_BURCJ RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|198036749|emb|CAR52649.1| polyribonucleotide nucleotidyltransferase [Burkholderia cenocepacia
J2315]
gi|358071870|emb|CCE50469.1| Polyribonucleotide nucleotidyltransferase [Burkholderia cenocepacia
H111]
gi|443599337|gb|ELT67626.1| polyribonucleotide nucleotidyltransferase [Burkholderia cenocepacia
K56-2Valvano]
gi|443601617|gb|ELT69754.1| polyribonucleotide nucleotidyltransferase [Burkholderia cenocepacia
BC7]
Length = 713
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 383 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 431
>gi|171316299|ref|ZP_02905520.1| Polyribonucleotide nucleotidyltransferase [Burkholderia ambifaria
MEX-5]
gi|171098525|gb|EDT43326.1| Polyribonucleotide nucleotidyltransferase [Burkholderia ambifaria
MEX-5]
Length = 714
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|170698105|ref|ZP_02889185.1| Polyribonucleotide nucleotidyltransferase [Burkholderia ambifaria
IOP40-10]
gi|170136963|gb|EDT05211.1| Polyribonucleotide nucleotidyltransferase [Burkholderia ambifaria
IOP40-10]
Length = 714
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|167585967|ref|ZP_02378355.1| polynucleotide phosphorylase/polyadenylase [Burkholderia ubonensis
Bu]
Length = 715
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|254247654|ref|ZP_04940975.1| 3' exoribonuclease:RNA binding S1:KH, type 1 [Burkholderia
cenocepacia PC184]
gi|124872430|gb|EAY64146.1| 3' exoribonuclease:RNA binding S1:KH, type 1 [Burkholderia
cenocepacia PC184]
Length = 730
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 400 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 448
>gi|170733613|ref|YP_001765560.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
cenocepacia MC0-3]
gi|226702627|sp|B1JVP5.1|PNP_BURCC RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|169816855|gb|ACA91438.1| Polyribonucleotide nucleotidyltransferase [Burkholderia cenocepacia
MC0-3]
Length = 715
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|115352342|ref|YP_774181.1| polynucleotide phosphorylase/polyadenylase [Burkholderia ambifaria
AMMD]
gi|172061213|ref|YP_001808865.1| polynucleotide phosphorylase/polyadenylase [Burkholderia ambifaria
MC40-6]
gi|122322637|sp|Q0BDC6.1|PNP_BURCM RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|226702626|sp|B1YTR1.1|PNP_BURA4 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|115282330|gb|ABI87847.1| 3' exoribonuclease [Burkholderia ambifaria AMMD]
gi|171993730|gb|ACB64649.1| Polyribonucleotide nucleotidyltransferase [Burkholderia ambifaria
MC40-6]
Length = 714
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|134296437|ref|YP_001120172.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
vietnamiensis G4]
gi|187470949|sp|A4JGD4.1|PNP_BURVG RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|134139594|gb|ABO55337.1| 3' exoribonuclease [Burkholderia vietnamiensis G4]
Length = 715
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|107023192|ref|YP_621519.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
cenocepacia AU 1054]
gi|116690274|ref|YP_835897.1| polynucleotide phosphorylase/polyadenylase [Burkholderia
cenocepacia HI2424]
gi|123244852|sp|Q1BV09.1|PNP_BURCA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|187470943|sp|A0K927.1|PNP_BURCH RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|105893381|gb|ABF76546.1| 3' exoribonuclease [Burkholderia cenocepacia AU 1054]
gi|116648363|gb|ABK09004.1| 3' exoribonuclease [Burkholderia cenocepacia HI2424]
Length = 715
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRC-SNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR + V+C + +E+G+++R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKR-ALVKCLPSADEFGYSIR 433
>gi|74316711|ref|YP_314451.1| polynucleotide phosphorylase [Thiobacillus denitrificans ATCC
25259]
gi|123759157|sp|Q3SKX5.1|PNP_THIDA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|74056206|gb|AAZ96646.1| polyribonucleotide nucleotidyltransferase protein [Thiobacillus
denitrificans ATCC 25259]
Length = 706
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+G+ +R
Sbjct: 378 LHYNM-PPYATGETGRVGSPKRREIGHGRLAKRALLAVLPSKEEFGYTMR 426
>gi|6729001|gb|AAF26998.1|AC016827_9 putative mudrA protein [Arabidopsis thaliana]
Length = 609
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 2 EALKKTYKHQYYPVPDESRW----PPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
E+ + Y PVP+ R PPE + PP RT GRP+ KK D KR
Sbjct: 533 ESHRLMYAESIQPVPNMDRMMLDDPPEGLVCVTPPPTRRTPGRPKIKKVEPLD---MMKR 589
Query: 58 SSSVRCSNFEEWGHNVRTCK 77
++CS + GHN +TCK
Sbjct: 590 --QLQCSKCKGLGHNKKTCK 607
>gi|357120202|ref|XP_003561818.1| PREDICTED: uncharacterized protein LOC100844534 [Brachypodium
distachyon]
Length = 448
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 4 LKKTYKHQYYPVPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVR 62
+K Y++ P+ D +WP + + + PPI+ R GRP+ ++ + +E R +V
Sbjct: 230 FQKAYENCVGPMTDRQQWPKVDPGFKLWPPILKRAAGRPRVRRYKGWEEGGGNSR-RTVT 288
Query: 63 CSNFEEWGHNVRTC 76
C + GH +TC
Sbjct: 289 CKRCHQKGHMQKTC 302
>gi|297608625|ref|NP_001061869.2| Os08g0432600 [Oryza sativa Japonica Group]
gi|255678470|dbj|BAF23783.2| Os08g0432600 [Oryza sativa Japonica Group]
Length = 892
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE 51
E KKTY+H PV ES WP + LPP + + GRP+ +R++ E
Sbjct: 675 ERYKKTYQHVLQPVEHESAWPVSPNPKPLPPRVKKMPGRPKKNRRKDPSE 724
>gi|340788246|ref|YP_004753711.1| polyribonucleotide nucleotidyltransferase [Collimonas fungivorans
Ter331]
gi|340553513|gb|AEK62888.1| Polyribonucleotide nucleotidyltransferase [Collimonas fungivorans
Ter331]
Length = 714
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ E++ ++VR
Sbjct: 388 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALQAALPAPEDFSYSVR 436
>gi|242079955|ref|XP_002444746.1| hypothetical protein SORBIDRAFT_07g027090 [Sorghum bicolor]
gi|241941096|gb|EES14241.1| hypothetical protein SORBIDRAFT_07g027090 [Sorghum bicolor]
Length = 881
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRA------F 55
EA Y + +P D + W + + PP + GRP ++++A E +
Sbjct: 666 EAFATAYANNIWPCKDMAAWEKTVGPPVAPPGYEKKVGRPPKARKKQAYEVQGRNGPKLT 725
Query: 56 KRSSSVRCSNFEEWGHNVRTCKVDK 80
K S + CS + HNVRTC++ K
Sbjct: 726 KHGSKMHCSWCKSSDHNVRTCELKK 750
>gi|449445238|ref|XP_004140380.1| PREDICTED: uncharacterized protein LOC101214069 [Cucumis sativus]
gi|449473642|ref|XP_004153939.1| PREDICTED: uncharacterized protein LOC101204820 [Cucumis sativus]
Length = 265
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPP--IIIRTTGRPQTKKRREADENRAFKRSSS 60
K+ Y +++P+ WP E+ + + P +++ GRP+T R +E + S S
Sbjct: 183 TFKRCYDGRFHPIQHSDYWP-EISFTEVRPNADLLKEPGRPRTT--RIQNEMDWKESSQS 239
Query: 61 VRCSNFEEWGHNVRTC 76
+RC+ + GHN+RTC
Sbjct: 240 IRCTVCKVEGHNIRTC 255
>gi|242060818|ref|XP_002451698.1| hypothetical protein SORBIDRAFT_04g006220 [Sorghum bicolor]
gi|241931529|gb|EES04674.1| hypothetical protein SORBIDRAFT_04g006220 [Sorghum bicolor]
Length = 719
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 2 EALKKTYKHQYYPVPD----ESRWPPELHYNML--PPIIIRTTGRPQTKKRREADENRAF 55
E + TY P+PD + P +L P + R GRP K + AD A
Sbjct: 638 ECYRLTYAMSINPIPDVFVPTAAGDPSQGTTLLSSPILTRRQVGRP---KEKPADPRIAI 694
Query: 56 KRSSSVRCSNFEEWGHNVRTCKV 78
KR+ VRCS + +GHN TCKV
Sbjct: 695 KRA--VRCSRCKGYGHNKATCKV 715
>gi|114332122|ref|YP_748344.1| polynucleotide phosphorylase/polyadenylase [Nitrosomonas eutropha
C91]
gi|122313196|sp|Q0AE53.1|PNP_NITEC RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|114309136|gb|ABI60379.1| 3' exoribonuclease [Nitrosomonas eutropha C91]
Length = 705
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ EE+G+ +R
Sbjct: 378 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALLAVLPPVEEFGYAMR 426
>gi|303257193|ref|ZP_07343207.1| polyribonucleotide nucleotidyltransferase [Burkholderiales
bacterium 1_1_47]
gi|302860684|gb|EFL83761.1| polyribonucleotide nucleotidyltransferase [Burkholderiales
bacterium 1_1_47]
Length = 724
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + N E++ + +R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALTAVLPNEEDFQYTMR 433
>gi|393776293|ref|ZP_10364589.1| polynucleotide phosphorylase polyadenylase [Ralstonia sp. PBA]
gi|392716682|gb|EIZ04260.1| polynucleotide phosphorylase polyadenylase [Ralstonia sp. PBA]
Length = 735
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+ + VR
Sbjct: 378 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALAPVLPTPEEFAYTVR 426
>gi|415924064|ref|ZP_11554830.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum
frisingense GSF30]
gi|407760420|gb|EKF69718.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum
frisingense GSF30]
Length = 711
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ +E+ ++VR
Sbjct: 383 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALIAALPAADEFSYSVR 431
>gi|409405576|ref|ZP_11254038.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum sp.
GW103]
gi|386434125|gb|EIJ46950.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum sp.
GW103]
Length = 711
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ +E+ ++VR
Sbjct: 383 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALIAALPAADEFSYSVR 431
>gi|300311084|ref|YP_003775176.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum
seropedicae SmR1]
gi|300073869|gb|ADJ63268.1| polyribonucleotide nucleotidyltransferase protein [Herbaspirillum
seropedicae SmR1]
Length = 712
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ +E+ ++VR
Sbjct: 383 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALIAALPAADEFSYSVR 431
>gi|413954737|gb|AFW87386.1| hypothetical protein ZEAMMB73_887474 [Zea mays]
Length = 723
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPELHYNMLP---PIIIRTTGRPQTKKRREADENRAFKR 57
E + TY P+PD P + P P +RT R K + AD A KR
Sbjct: 638 TECYRLTYSLSINPIPDVIVPPTLIDLAQSPATYPCPLRTRRRVGRPKEKPADPRIAIKR 697
Query: 58 SSSVRCSNFEEWGHNVRTCKV 78
+ VRCS + +GHN TCKV
Sbjct: 698 A--VRCSRCKGYGHNKATCKV 716
>gi|312796906|ref|YP_004029828.1| Polyribonucleotide nucleotidyltransferase / Polynucleotide
adenylyltransferase [Burkholderia rhizoxinica HKI 454]
gi|312168681|emb|CBW75684.1| Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) /
Polynucleotide adenylyltransferase (EC 2.7.7.19)
[Burkholderia rhizoxinica HKI 454]
Length = 768
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KRS +E+G+ +R
Sbjct: 429 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRSLVPCLPGDDEFGYTIR 477
>gi|125602635|gb|EAZ41960.1| hypothetical protein OsJ_26505 [Oryza sativa Japonica Group]
Length = 142
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 17 DESRWPP-ELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVRT 75
D+S+W + + + PP++ R+ GRP++++ + +E + KR RC ++GH +T
Sbjct: 3 DKSQWAKINVGFKLYPPLLKRSAGRPRSRRIKGMEEGGSGKR--KYRCKRCGQFGHIKKT 60
Query: 76 C 76
C
Sbjct: 61 C 61
>gi|222622545|gb|EEE56677.1| hypothetical protein OsJ_06119 [Oryza sativa Japonica Group]
Length = 234
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E +K Y + P+ + WP ++ Y + P + R GRP+ K + +DE K+
Sbjct: 12 ERFRKAYAGLFNPMTSKHLWPLVDVGYKIKKPKLRRKPGRPRVSKMKASDEVGQRKKR-- 69
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 70 -KCSECHELGHTAKYCQ 85
>gi|344943494|ref|ZP_08782781.1| Polyribonucleotide nucleotidyltransferase [Methylobacter
tundripaludum SV96]
gi|344260781|gb|EGW21053.1| Polyribonucleotide nucleotidyltransferase [Methylobacter
tundripaludum SV96]
Length = 692
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 18 ESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
E + P LHYN PP + TG + KRRE R KR + N EE+ + +R
Sbjct: 368 EYKEPFMLHYN-FPPYSVGETGFVGSPKRREIGHGRLAKRGVAAVLPNMEEFPYTIR 423
>gi|331000847|ref|ZP_08324493.1| polyribonucleotide nucleotidyltransferase [Parasutterella
excrementihominis YIT 11859]
gi|329570375|gb|EGG52108.1| polyribonucleotide nucleotidyltransferase [Parasutterella
excrementihominis YIT 11859]
Length = 735
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + N E++ + +R
Sbjct: 396 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALTAVLPNEEDFQYTMR 444
>gi|326519080|dbj|BAJ96539.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531422|dbj|BAK05586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 7 TYKHQYYPVPDESRWPP--ELHYNM----LPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
TY+ P+PD P +L NM P + R GRP K + AD A KR+
Sbjct: 644 TYEMPINPIPDVIVPLPSTDLTQNMGLQPCPILARRQVGRP---KEKPADPRIAIKRA-- 698
Query: 61 VRCSNFEEWGHNVRTCKV 78
VRCS + +GHN TCKV
Sbjct: 699 VRCSRCKGYGHNKATCKV 716
>gi|147855764|emb|CAN83444.1| hypothetical protein VITISV_005823 [Vitis vinifera]
Length = 534
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYN---MLPPIIIRTTGRPQTKKRREADENRAFKRSS 59
AL +Y YP +E W H MLPP R TGRP+ + +E+
Sbjct: 458 ALLSSYSKCIYPTGNEIDWVILDHIRNKIMLPPKTRRPTGRPRKVRIPSGEESNRISH-- 515
Query: 60 SVRCSNFEEWGHNVRTCK 77
CS ++GHN +TCK
Sbjct: 516 ---CSRCGQYGHNRKTCK 530
>gi|237747627|ref|ZP_04578107.1| polyribonucleotide nucleotidyltransferase [Oxalobacter formigenes
OXCC13]
gi|229378989|gb|EEO29080.1| polyribonucleotide nucleotidyltransferase [Oxalobacter formigenes
OXCC13]
Length = 713
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
+HYNM PP TGR T KRRE R KR+ + EE+ +++R
Sbjct: 383 MHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALIACLPSQEEFSYSIR 431
>gi|344341280|ref|ZP_08772201.1| Polyribonucleotide nucleotidyltransferase [Thiocapsa marina 5811]
gi|343798860|gb|EGV16813.1| Polyribonucleotide nucleotidyltransferase [Thiocapsa marina 5811]
Length = 699
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + TGR + KRRE R KR + EE+ ++VR
Sbjct: 381 LHYN-FPPFCVGETGRVGSPKRREVGHGRLAKRGVLAVMPSIEEFPYSVR 429
>gi|422348484|ref|ZP_16429377.1| polyribonucleotide nucleotidyltransferase [Sutterella
wadsworthensis 2_1_59BFAA]
gi|404659400|gb|EKB32252.1| polyribonucleotide nucleotidyltransferase [Sutterella
wadsworthensis 2_1_59BFAA]
Length = 707
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ EE+ + +R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALKAVLPTAEEFQYTIR 433
>gi|152979779|ref|YP_001353149.1| polynucleotide phosphorylase [Janthinobacterium sp. Marseille]
gi|187610276|sp|A6SY02.1|PNP_JANMA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|151279856|gb|ABR88266.1| polyribonucleotide nucleotidyltransferase [Janthinobacterium sp.
Marseille]
Length = 711
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ E++ ++VR
Sbjct: 383 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALVAALPAPEDFSYSVR 431
>gi|222618626|gb|EEE54758.1| hypothetical protein OsJ_02130 [Oryza sativa Japonica Group]
Length = 673
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 3 ALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRS 58
A TY+H PV WP P ++ GRP+ ++RRE E R K
Sbjct: 517 AFMSTYEHCLEPVEGIHSWPVSKRPKPAAPSYVKMPGRPKKERRREPHEKPKATRVSKVG 576
Query: 59 SSVRCSNFEEWGHNVRTC 76
+ + C + GHN TC
Sbjct: 577 TIIMCRRCKGIGHNKTTC 594
>gi|89900282|ref|YP_522753.1| polynucleotide phosphorylase/polyadenylase [Rhodoferax
ferrireducens T118]
gi|122479529|sp|Q21YD1.1|PNP_RHOFD RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|89345019|gb|ABD69222.1| 3' exoribonuclease [Rhodoferax ferrireducens T118]
Length = 706
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ + EE+ + +R
Sbjct: 380 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALMAVLPSKEEFPYTMR 428
>gi|359479587|ref|XP_003632297.1| PREDICTED: uncharacterized protein LOC100261309 [Vitis vinifera]
Length = 752
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 5 KKTYKHQYYPVPDESRWPP-----------ELHYNMLPPIIIRTTGRPQTKKRREADENR 53
+K Y +P+PD++ W + + PP +R GRP+ ++ R D R
Sbjct: 669 RKAYSQTIHPIPDKTLWKEMADGSQDGGDNAVETIINPPKSLRPQGRPRKRRVRAEDRGR 728
Query: 54 AFKRSSSVRCSNFEEWGHNVRTC 76
KR V CS + GH TC
Sbjct: 729 V-KR--VVHCSRCNQTGHFRTTC 748
>gi|134095034|ref|YP_001100109.1| polynucleotide phosphorylase [Herminiimonas arsenicoxydans]
gi|187610275|sp|A4G647.1|PNP_HERAR RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|133738937|emb|CAL61984.1| Polyribonucleotide nucleotidyltransferase (Polynucleotide
phosphorylase) (PNPase) [Herminiimonas arsenicoxydans]
Length = 710
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ E++ ++VR
Sbjct: 383 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALIAALPAPEDFSYSVR 431
>gi|218190430|gb|EEC72857.1| hypothetical protein OsI_06610 [Oryza sativa Indica Group]
Length = 358
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 1 NEALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSS 59
+E +K Y + P+ + WP ++ Y + P + R GRP+ + + +DE K+
Sbjct: 11 DERFRKAYAGLFNPMTSKHLWPLVDVGYKIKKPKLRRKPGRPRVSRMKASDEVGQRKKR- 69
Query: 60 SVRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 70 --KCSECHELGHTAKYCQ 85
>gi|297721039|ref|NP_001172882.1| Os02g0254800 [Oryza sativa Japonica Group]
gi|255670770|dbj|BAH91611.1| Os02g0254800 [Oryza sativa Japonica Group]
Length = 560
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E +K Y + P+ + WP ++ Y + P + R GRP+ K + +DE K+
Sbjct: 171 ERFRKAYAGLFNPMTSKHLWPLVDVGYKIKKPKLRRKPGRPRVSKMKASDEVGQRKKR-- 228
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 229 -KCSECHELGHTAKYCQ 244
>gi|187929298|ref|YP_001899785.1| polynucleotide phosphorylase/polyadenylase [Ralstonia pickettii
12J]
gi|226702680|sp|B2U7R6.1|PNP_RALPJ RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|187726188|gb|ACD27353.1| Polyribonucleotide nucleotidyltransferase [Ralstonia pickettii 12J]
Length = 724
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ +E+G+ +R
Sbjct: 380 LHYNM-PPFATGETGRVGSPKRREVGHGRLAKRALIPVLPPADEFGYTIR 428
>gi|260223146|emb|CBA33418.1| Polyribonucleotide nucleotidyltransferase [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 722
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ EE+ +++R
Sbjct: 401 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALVAVLPTKEEFPYSLR 449
>gi|242039061|ref|XP_002466925.1| hypothetical protein SORBIDRAFT_01g016800 [Sorghum bicolor]
gi|241920779|gb|EER93923.1| hypothetical protein SORBIDRAFT_01g016800 [Sorghum bicolor]
Length = 995
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN------RAF 55
EA K Y +P D++ W +LPPI + GRP +R++ E R
Sbjct: 761 EAFKNAYGFNIWPCKDKTEWAKVNGPEVLPPIYEKKVGRPPKSRRKQPHEVQGKNGPRLT 820
Query: 56 KRSSSVRCSNFEEWGHNVRTCKVDKGS 82
+ + C + HN CK+ K S
Sbjct: 821 RHGVVMHCKYCSDANHNSGGCKLKKMS 847
>gi|449509361|ref|XP_004163566.1| PREDICTED: uncharacterized protein LOC101224935 [Cucumis sativus]
Length = 174
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPE---LHYNMLPPIIIRTTGRPQ 42
NE L Y YPV ++S W +H +LPP +++ GRP+
Sbjct: 124 NECLLAAYSEAVYPVGNQSEWKTTEEYVHMTVLPPKVVKRVGRPK 168
>gi|242044494|ref|XP_002460118.1| hypothetical protein SORBIDRAFT_02g023020 [Sorghum bicolor]
gi|241923495|gb|EER96639.1| hypothetical protein SORBIDRAFT_02g023020 [Sorghum bicolor]
Length = 1036
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV 61
+A TY H PV WP LPP ++ GRP+T++ RE E + S V
Sbjct: 824 DAYMATYAHVLQPVEGAENWPTAEMPKPLPPAFVKMPGRPKTQRTREQWEQPKGTKLSRV 883
Query: 62 ----RCSNFEEWGHNVRTC 76
C + HN R C
Sbjct: 884 GVKMTCRLCGKSDHNSRRC 902
>gi|242070077|ref|XP_002450315.1| hypothetical protein SORBIDRAFT_05g003600 [Sorghum bicolor]
gi|241936158|gb|EES09303.1| hypothetical protein SORBIDRAFT_05g003600 [Sorghum bicolor]
Length = 791
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRRE 48
+A TY H PV WP LPP ++ GRP+T++ RE
Sbjct: 579 DAYMATYAHVLQPVEGAENWPTAEMPKPLPPAFVKMPGRPKTQRTRE 625
>gi|224115958|ref|XP_002332013.1| predicted protein [Populus trichocarpa]
gi|222875238|gb|EEF12369.1| predicted protein [Populus trichocarpa]
Length = 572
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query: 5 KKTYKHQYYPVPDESRWPP----------ELHYNMLPPIIIRTTGRPQTKKRREADENRA 54
+KTY +P+PD+S W + + PP +R GRP+ K+ R D R
Sbjct: 493 RKTYSQTIHPIPDKSLWTELSDGDPNSNKAIEVVINPPKSLRPPGRPRKKRVRAEDRGRV 552
Query: 55 FKRSSSVRCSNFEEWGHNVRTC 76
KR V CS + GH TC
Sbjct: 553 -KR--VVHCSRCNQTGHFRTTC 571
>gi|224125676|ref|XP_002319648.1| predicted protein [Populus trichocarpa]
gi|222858024|gb|EEE95571.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 5 KKTYKHQYYPVPDESRW------PPELHYN----MLPPIIIRTTGRPQTKKRREADENRA 54
+KTY +P+PD+S W P+ + N + PP +R GRP+ K+ R D R
Sbjct: 499 RKTYSQTIHPIPDKSLWIEFSEGDPDSNKNVEVIINPPKSLRPPGRPRKKRVRAEDRGR- 557
Query: 55 FKRSSSVRCSNFEEWGHNVRTC 76
KR V CS + GH TC
Sbjct: 558 MKR--VVHCSRCNQTGHFRTTC 577
>gi|357114822|ref|XP_003559193.1| PREDICTED: uncharacterized protein LOC100821752 [Brachypodium
distachyon]
Length = 713
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAF----KRSSS 60
K+ +K YPVP + W ++ P I + GR + +R+ ADE +R ++
Sbjct: 595 KEEHKLFVYPVPGKHAWTKTASPDIDPSIFLNHPGRSKKNRRKGADEKAKIPVGKERMTT 654
Query: 61 VRCSNFEEWGHNVRTC 76
CSN GH +C
Sbjct: 655 STCSNCHLQGHKYTSC 670
>gi|242073558|ref|XP_002446715.1| hypothetical protein SORBIDRAFT_06g021090 [Sorghum bicolor]
gi|241937898|gb|EES11043.1| hypothetical protein SORBIDRAFT_06g021090 [Sorghum bicolor]
Length = 784
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKR----READENRAFKRSS 59
K Y+ +PD+S WP H L P ++R TG + K R E K
Sbjct: 535 FKAAYEGSIPCIPDKSMWPKGTHGFFLYPPLLRATGGGRRKNRFKGALEGGSRNKKKAGK 594
Query: 60 SVRCSNFEEWGHNVRTCK 77
+CS ++ GH+ TCK
Sbjct: 595 KHKCSICQQLGHHWYTCK 612
>gi|390951415|ref|YP_006415174.1| polyribonucleotide nucleotidyltransferase [Thiocystis violascens
DSM 198]
gi|390427984|gb|AFL75049.1| polyribonucleotide nucleotidyltransferase [Thiocystis violascens
DSM 198]
Length = 698
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + TGR + KRRE R KR + EE+ ++VR
Sbjct: 380 LHYN-FPPFCVGETGRVGSPKRREIGHGRLAKRGILAVMPSIEEFPYSVR 428
>gi|357124099|ref|XP_003563744.1| PREDICTED: uncharacterized protein LOC100839983 [Brachypodium
distachyon]
Length = 83
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 13 YPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGH 71
P+ +S+WP + + +PP + R+ GRP+T++ + E ++ RC GH
Sbjct: 1 MPIRGQSQWPKAQPDFETIPPKLFRSAGRPRTRRYKNNSEGGTDRKHVCKRCG---ATGH 57
Query: 72 NVRTCK 77
++TCK
Sbjct: 58 LMKTCK 63
>gi|77553201|gb|ABA95997.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 420
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKR 57
+A + TY H P+ S WP + + P I+ GRP+T++RRE E + K
Sbjct: 243 DAFRSTYVHCLQPLEGMSAWPQDDREPLNAPGYIKMPGRPKTERRREKHEPPKPTKMPKY 302
Query: 58 SSSVRCS 64
+ +RC+
Sbjct: 303 GTVIRCT 309
>gi|332526743|ref|ZP_08402845.1| polynucleotide phosphorylase/polyadenylase [Rubrivivax
benzoatilyticus JA2]
gi|332111146|gb|EGJ11178.1| polynucleotide phosphorylase/polyadenylase [Rubrivivax
benzoatilyticus JA2]
Length = 769
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ N +E+ + +R
Sbjct: 380 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVAVLPNKDEFPYTMR 428
>gi|332528747|ref|ZP_08404724.1| polynucleotide phosphorylase/polyadenylase [Hylemonella gracilis
ATCC 19624]
gi|332041813|gb|EGI78162.1| polynucleotide phosphorylase/polyadenylase [Hylemonella gracilis
ATCC 19624]
Length = 717
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ EE+ + +R
Sbjct: 380 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALVAVLPTKEEFPYTMR 428
>gi|237745432|ref|ZP_04575912.1| polyribonucleotide nucleotidyltransferase [Oxalobacter formigenes
HOxBLS]
gi|229376783|gb|EEO26874.1| polyribonucleotide nucleotidyltransferase [Oxalobacter formigenes
HOxBLS]
Length = 707
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
+HYNM PP TGR T KRRE R KR+ + +E+ +++R
Sbjct: 383 MHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALVACLPSQDEFSYSIR 431
>gi|350545157|ref|ZP_08914662.1| Polyribonucleotide nucleotidyltransferase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527048|emb|CCD38988.1| Polyribonucleotide nucleotidyltransferase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 733
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM P TGR + KRRE R KR+ + EE+G+++R
Sbjct: 403 LHYNM-PSFATGETGRVGSPKRREIGHGRLAKRALVACLPSAEEFGYSIR 451
>gi|356510229|ref|XP_003523842.1| PREDICTED: LOW QUALITY PROTEIN: sucrose-phosphate synthase-like
[Glycine max]
Length = 1022
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN 52
+ TY YP + WPP MLPP++ R GRP+ + ++ DE+
Sbjct: 105 MLTTYSFIVYPCNGPNLWPPLQTPVMLPPVMRRAPGRPKKARNKKNDES 153
>gi|302878493|ref|YP_003847057.1| polyribonucleotide nucleotidyltransferase [Gallionella
capsiferriformans ES-2]
gi|302581282|gb|ADL55293.1| polyribonucleotide nucleotidyltransferase [Gallionella
capsiferriformans ES-2]
Length = 701
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP TGR + KRRE R KR+ + E++G+ VR
Sbjct: 374 LHYN-FPPFATGETGRVGSPKRREIGHGRLAKRALVAVLPSEEDFGYAVR 422
>gi|218192998|gb|EEC75425.1| hypothetical protein OsI_11941 [Oryza sativa Indica Group]
Length = 743
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 14 PVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSSSVRCSNFEEW 69
PV + WP + + P I+ RP+T++RRE +E +A K + +RC + ++
Sbjct: 538 PVEGMTSWPDDPREPLNAPGYIKMPVRPKTERRREPNEPAKPTKASKFGTIMRCRSCKQP 597
Query: 70 GHNVRTCKVDKGS 82
GHN + C G+
Sbjct: 598 GHNSKGCHKHSGA 610
>gi|291613953|ref|YP_003524110.1| polyribonucleotide nucleotidyltransferase [Sideroxydans
lithotrophicus ES-1]
gi|291584065|gb|ADE11723.1| polyribonucleotide nucleotidyltransferase [Sideroxydans
lithotrophicus ES-1]
Length = 709
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP TGR T KRRE R KR+ + EE G+ +R
Sbjct: 383 LHYN-FPPYSTGETGRVGTPKRREIGHGRLAKRALVAVLPSEEECGYAIR 431
>gi|394988388|ref|ZP_10381224.1| polynucleotide phosphorylase/polyadenylase [Sulfuricella
denitrificans skB26]
gi|393792384|dbj|GAB70863.1| polynucleotide phosphorylase/polyadenylase [Sulfuricella
denitrificans skB26]
Length = 707
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSV 61
+AL+ YK ++ LHYN PP GR T KRRE R KR+
Sbjct: 366 DALQGEYKDRFL-----------LHYN-FPPYATGECGRVGTPKRREIGHGRLAKRALVA 413
Query: 62 RCSNFEEWGHNVR 74
+ EE+G+ +R
Sbjct: 414 ALPSPEEFGYTMR 426
>gi|325982016|ref|YP_004294418.1| polyribonucleotide nucleotidyltransferase [Nitrosomonas sp. AL212]
gi|325531535|gb|ADZ26256.1| Polyribonucleotide nucleotidyltransferase [Nitrosomonas sp. AL212]
Length = 709
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP GR T KRRE R KR+ EE+G+++R
Sbjct: 378 LHYNM-PPYATGEIGRVGTPKRREIGHGRLAKRALVAVLPPPEEFGYSLR 426
>gi|410694440|ref|YP_003625062.1| Polyribonucleotide nucleotidyltransferase (Polynucleotide
phosphorylase) (PNPase) [Thiomonas sp. 3As]
gi|294340865|emb|CAZ89260.1| Polyribonucleotide nucleotidyltransferase (Polynucleotide
phosphorylase) (PNPase) [Thiomonas sp. 3As]
Length = 719
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ E++ + +R
Sbjct: 378 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALLAVLPKKEDFAYTMR 426
>gi|296136710|ref|YP_003643952.1| polyribonucleotide nucleotidyltransferase [Thiomonas intermedia
K12]
gi|295796832|gb|ADG31622.1| polyribonucleotide nucleotidyltransferase [Thiomonas intermedia
K12]
Length = 719
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ E++ + +R
Sbjct: 378 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALLAVLPKKEDFAYTMR 426
>gi|242083566|ref|XP_002442208.1| hypothetical protein SORBIDRAFT_08g016376 [Sorghum bicolor]
gi|241942901|gb|EES16046.1| hypothetical protein SORBIDRAFT_08g016376 [Sorghum bicolor]
Length = 158
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRRE 48
+A TY H PV WP LPP ++ GRP+T++ RE
Sbjct: 82 DAYMATYAHVLQPVEGAENWPTAEMPKPLPPAFVKMPGRPKTQRTRE 128
>gi|125604952|gb|EAZ43988.1| hypothetical protein OsJ_28609 [Oryza sativa Japonica Group]
Length = 901
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRS 58
EA + Y YPVP E W ++ PP + GRP+ +RR DE KRS
Sbjct: 735 EAYLRAYAPVIYPVPGEHDWTTTDSPDIDPPKFTKQPGRPKKSRRRGQDEAPKAKRS 791
>gi|319941417|ref|ZP_08015745.1| polyribonucleotide nucleotidyltransferase [Sutterella
wadsworthensis 3_1_45B]
gi|319805037|gb|EFW01867.1| polyribonucleotide nucleotidyltransferase [Sutterella
wadsworthensis 3_1_45B]
Length = 707
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + EE+ + +R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALKAVLPSPEEFQYTLR 433
>gi|118602474|ref|YP_903689.1| polynucleotide phosphorylase/polyadenylase [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|187611284|sp|A1AWB1.1|PNP_RUTMC RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName:
Full=Polynucleotide phosphorylase; Short=PNPase
gi|118567413|gb|ABL02218.1| Polyribonucleotide nucleotidyltransferase [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 695
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + GR T KRRE R +R + + EE+ + VR
Sbjct: 380 LHYN-FPPYCVGEIGRVGTTKRREIGHGRLVRRGIAACLPSIEEFPYTVR 428
>gi|378823303|ref|ZP_09845961.1| polyribonucleotide nucleotidyltransferase [Sutterella parvirubra
YIT 11816]
gi|378597879|gb|EHY31109.1| polyribonucleotide nucleotidyltransferase [Sutterella parvirubra
YIT 11816]
Length = 707
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ +E+ + +R
Sbjct: 385 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALKAVLPTADEFQYTIR 433
>gi|375106904|ref|ZP_09753165.1| polyribonucleotide nucleotidyltransferase [Burkholderiales
bacterium JOSHI_001]
gi|374667635|gb|EHR72420.1| polyribonucleotide nucleotidyltransferase [Burkholderiales
bacterium JOSHI_001]
Length = 768
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR + KRRE R KR+ + E++ +++R
Sbjct: 380 LHYNM-PPFATGETGRVGSPKRREIGHGRLAKRALVAALPSKEDFPYSIR 428
>gi|222630194|gb|EEE62326.1| hypothetical protein OsJ_17115 [Oryza sativa Japonica Group]
Length = 636
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E +K Y + P+ + WP ++ Y + P + R GRP+ + + +DE K+
Sbjct: 415 ERFRKAYAGLFNPMTSKHLWPLVDVGYKIKKPKLRRKPGRPRVSRMKASDEVGQRKKR-- 472
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 473 -KCSECHELGHTAKYCQ 488
>gi|125562993|gb|EAZ08373.1| hypothetical protein OsI_30631 [Oryza sativa Indica Group]
Length = 531
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRS 58
EA + Y YPVP E W ++ PP + GRP+ +RR DE KRS
Sbjct: 365 EAYLRAYAPVIYPVPGEHDWTTTDSPDIDPPKFTKQPGRPKKSRRRGQDEAPKSKRS 421
>gi|451855818|gb|EMD69109.1| hypothetical protein COCSADRAFT_75810, partial [Cochliobolus
sativus ND90Pr]
Length = 118
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 43 TKKRREADENRAFKRSSSVRCSNFEEWGHNVRTCKVD 79
T++ R+ E R + RCS E GHN RTCK D
Sbjct: 77 TREERQGGERSGVSRQALARCSRCRETGHNSRTCKKD 113
>gi|451845897|gb|EMD59208.1| hypothetical protein COCSADRAFT_101729, partial [Cochliobolus
sativus ND90Pr]
Length = 136
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 45 KRREADENRAFKRSSSVRCSNFEEWGHNVRTCKVD 79
K R+ E R + RCS E GHN RTCK D
Sbjct: 97 KERQGGERLGVSRQALARCSRCRETGHNARTCKKD 131
>gi|344344340|ref|ZP_08775203.1| Polyribonucleotide nucleotidyltransferase [Marichromatium
purpuratum 984]
gi|343804010|gb|EGV21913.1| Polyribonucleotide nucleotidyltransferase [Marichromatium
purpuratum 984]
Length = 699
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + +GR + KRRE R KR + EE+ ++VR
Sbjct: 381 LHYN-FPPFCVGESGRVGSPKRREIGHGRLAKRGVLAVMPSIEEFPYSVR 429
>gi|375337561|ref|ZP_09778905.1| polynucleotide phosphorylase/polyadenylase, partial
[Succinivibrionaceae bacterium WG-1]
Length = 450
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + GR + KRRE R KR S + EE+ + +R
Sbjct: 382 LHYN-FPPYCVGEIGRIGSPKRREIGHGRLAKRGVSAVLPSLEEFPYTIR 430
>gi|357453893|ref|XP_003597227.1| hypothetical protein MTR_2g094150 [Medicago truncatula]
gi|355486275|gb|AES67478.1| hypothetical protein MTR_2g094150 [Medicago truncatula]
Length = 172
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 6 KTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRS-----SS 60
+TY + +PV + W P + +PP + R GRP+ + ++ +E + + +
Sbjct: 25 ETYNYFIHPVNSQIYWEPTPYDKPVPPKVRRDAGRPKKNRIKDGNEEPVCRSNMKNTYND 84
Query: 61 VRCSNFEEWGHNVRTC 76
+C +E + HN+R C
Sbjct: 85 TQCDMYELFVHNLRGC 100
>gi|301097800|ref|XP_002897994.1| hypothetical protein PITG_15719 [Phytophthora infestans T30-4]
gi|262106439|gb|EEY64491.1| hypothetical protein PITG_15719 [Phytophthora infestans T30-4]
Length = 171
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 30 LPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVRTCKVDKGS 82
LP + + GRP+TK+ R E+ SS CS+ GHN R+C G+
Sbjct: 122 LPAVFTKNLGRPKTKRIRSVGED---GNRSSQSCSSCHRKGHNKRSCTQSDGT 171
>gi|222635930|gb|EEE66062.1| hypothetical protein OsJ_22065 [Oryza sativa Japonica Group]
Length = 719
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E +K Y + P+ + WP ++ Y + P + R GRP+ + + +DE K+
Sbjct: 509 ERFRKAYAGLFNPMTSKHLWPLVDVGYKIKKPKLRRKPGRPRVSRMKASDEVAPRKKR-- 566
Query: 61 VRCSNFEEWGHNVRTCK 77
+CS E GH + C+
Sbjct: 567 -KCSECHELGHTAKYCQ 582
>gi|12324710|gb|AAG52313.1|AC021666_2 Mutator-like transposase; 53847-56139 [Arabidopsis thaliana]
Length = 583
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTT-GRPQTKKRREADENRAFKRSSSVR- 62
++TYK PV + WP + +LPP R GRP RR+ A +++
Sbjct: 480 QQTYKDGIAPVQGKILWPRVNRFGVLPPPWRRGNPGRPNNYARRKGRNEAASSSITTLSR 539
Query: 63 ------CSNFEEWGHNVRTCK 77
CSN ++ GHN + CK
Sbjct: 540 LHRVMTCSNCKQEGHNKKGCK 560
>gi|77553869|gb|ABA96665.1| hypothetical protein LOC_Os12g09680 [Oryza sativa Japonica Group]
Length = 446
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 15 VPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSSSVRCSNFEEWG 70
+ +S WP + + I+ G+P++K+RRE +E + K +++RC +++ G
Sbjct: 231 IEGKSSWPEDGREALNVLGYIKVPGKPRSKRRRELNELAKPKKVSKFGTTIRCRTYKKSG 290
Query: 71 HNVRTC 76
HN +C
Sbjct: 291 HNKSSC 296
>gi|242068703|ref|XP_002449628.1| hypothetical protein SORBIDRAFT_05g020420 [Sorghum bicolor]
gi|241935471|gb|EES08616.1| hypothetical protein SORBIDRAFT_05g020420 [Sorghum bicolor]
Length = 276
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 1 NEALKKTYKHQYYPVP----DESRWPPELH-YNMLPPIIIRTTGRPQTKKRREADENRAF 55
N L ++++ Y P+ D+S WP H + M PP++ T GR Q K + A E +
Sbjct: 87 NYYLVESFRAAYDPIIPAIRDKSMWPKAEHGFFMHPPLLKSTAGRRQ-KSYKGALEGGS- 144
Query: 56 KRSSSVR--CSNFEEWGHNVRTC 76
+ + VR C ++E+GH+ TC
Sbjct: 145 -KGAKVRHHCPIYQEYGHHWYTC 166
>gi|397170773|ref|ZP_10494183.1| polynucleotide phosphorylase/polyadenylase [Alishewanella aestuarii
B11]
gi|396087247|gb|EJI84847.1| polynucleotide phosphorylase/polyadenylase [Alishewanella aestuarii
B11]
Length = 706
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + TG + KRRE R KR +F+E+ + VR
Sbjct: 380 LHYN-FPPYSVGETGMMGSPKRREIGHGRLAKRGVQAVMPSFDEFPYTVR 428
>gi|393764354|ref|ZP_10352966.1| polynucleotide phosphorylase/polyadenylase [Alishewanella agri
BL06]
gi|392604984|gb|EIW87883.1| polynucleotide phosphorylase/polyadenylase [Alishewanella agri
BL06]
Length = 706
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + TG + KRRE R KR +F+E+ + VR
Sbjct: 380 LHYN-FPPYSVGETGMMGSPKRREIGHGRLAKRGVQAVMPSFDEFPYTVR 428
>gi|375109199|ref|ZP_09755449.1| polynucleotide phosphorylase/polyadenylase [Alishewanella jeotgali
KCTC 22429]
gi|374570758|gb|EHR41891.1| polynucleotide phosphorylase/polyadenylase [Alishewanella jeotgali
KCTC 22429]
Length = 706
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP + TG + KRRE R KR +F+E+ + VR
Sbjct: 380 LHYN-FPPYSVGETGMMGSPKRREIGHGRLAKRGVQAVMPSFDEFPYTVR 428
>gi|22002130|gb|AAM88614.1| putative mutator protein [Oryza sativa Japonica Group]
Length = 360
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 3 ALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKR 57
A K+ Y P+ D+++W + + PP++ R+ GRP++++ + +E KR
Sbjct: 247 AFKRAYAGHVVPMTDKAQWAKGNIGLKLHPPLLKRSAGRPRSRRIKGVEEGGVGKR 302
>gi|147767515|emb|CAN66712.1| hypothetical protein VITISV_041525 [Vitis vinifera]
Length = 518
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 1 NEALKKTYKHQYYPVPDESRWPPELHYN---MLPPIIIRTTGRPQTKKRREADENRAFKR 57
+AL +Y YP +E W H +LPP R TGRP+ + E KR
Sbjct: 440 TKALLSSYSECIYPTRNEIDWVVPNHIRDKVVLPPKTRRPTGRPRKVRIPFGGEG---KR 496
Query: 58 SSSVRCSNFEEWGHNVRTCK 77
+S RCS ++G N +TCK
Sbjct: 497 TS--RCSQCGQYGLNWKTCK 514
>gi|357140695|ref|XP_003571899.1| PREDICTED: uncharacterized protein LOC100834814 [Brachypodium
distachyon]
Length = 996
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 6 KTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADEN---RAFKRSSSVR 62
+T+ YPVP + W ++ PP GR + +R+ DE R R S+
Sbjct: 761 QTHNEIVYPVPGQHDWVQTDTPDIDPPHFFVHPGRRKKNRRKGQDEQGEPRGKGRMSTST 820
Query: 63 CSNFEEWGHNVRTC 76
CSN ++ GH +C
Sbjct: 821 CSNCKKQGHTYTSC 834
>gi|10177197|dbj|BAB10385.1| unnamed protein product [Arabidopsis thaliana]
Length = 733
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS- 60
E K Y +PV W ++PP GRP+ R + A +S
Sbjct: 593 EKWKLCYNSLLFPVNGMELWETHSDVVVMPPPDRIMPGRPKKNDRIKDPSEEASSENSQK 652
Query: 61 --VRCSNFEEWGHNVRTCKVD 79
V CSN + GHN RTC+++
Sbjct: 653 ALVTCSNCGQIGHNKRTCQIE 673
>gi|242096428|ref|XP_002438704.1| hypothetical protein SORBIDRAFT_10g024700 [Sorghum bicolor]
gi|241916927|gb|EER90071.1| hypothetical protein SORBIDRAFT_10g024700 [Sorghum bicolor]
Length = 720
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 7 TYKHQYYPVPDESRWPPELHYNMLP---PIIIRTTGRPQTKKRREADENRAFKRSSSVRC 63
TY P+PD P + P P +RT R K + AD A KR+ VRC
Sbjct: 644 TYSLSINPIPDVVVPPTLIDPAQSPATYPCPLRTRRRVGRPKEKPADPRIAIKRA--VRC 701
Query: 64 SNFEEWGHNVRTCKV 78
S + +GHN TCKV
Sbjct: 702 SRCKGYGHNKATCKV 716
>gi|22094356|gb|AAM91883.1| putative mutator protein [Oryza sativa Japonica Group]
Length = 896
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 2 EALKKTYKHQYYPVPDESRWP-PELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS 60
E K Y P+PD+S+WP + + +LPP+ R GR Q K R ++ RS
Sbjct: 809 ERYKLAYAGVILPLPDKSQWPKVNIGFKLLPPLTKREVGR-QRKNRIVGCLDKGKARSKG 867
Query: 61 ---VRCSNFEEWGH 71
V+C GH
Sbjct: 868 KWQVQCKRCLAMGH 881
>gi|218190724|gb|EEC73151.1| hypothetical protein OsI_07183 [Oryza sativa Indica Group]
Length = 388
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRA------F 55
EA K Y + P D + W +LPP + G+P+ +R+ E +
Sbjct: 169 EAFKSVYANNIMPCSDRANWEKMNGPQVLPPAYEKKVGKPKKTRRKHPTEVQGKNGPKLT 228
Query: 56 KRSSSVRCSNFEEWGHNVRTCKVDK 80
K + CS E HN + C V K
Sbjct: 229 KHGVIIHCSYCHEPNHNKKGCPVRK 253
>gi|62701947|gb|AAX93020.1| transposon protein, putative, mutator sub-class [Oryza sativa
Japonica Group]
gi|62732961|gb|AAX95080.1| transposon protein, putative, mutator sub-class [Oryza sativa
Japonica Group]
gi|77548842|gb|ABA91639.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 898
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSSS 60
++ Y + P+ D W + PP+ + GRP+ +R++ E + K
Sbjct: 724 EQAYSYNIMPLRDSIHWEKMQGIEVKPPVYEKKVGRPKKTRRKQPQELEGGTKISKHGVE 783
Query: 61 VRCSNFEEWGHNVRTCKVDKGSKK 84
+ CS + GHN +CK K K
Sbjct: 784 MHCSYCKNGGHNKTSCKQRKADLK 807
>gi|242053011|ref|XP_002455651.1| hypothetical protein SORBIDRAFT_03g016930 [Sorghum bicolor]
gi|241927626|gb|EES00771.1| hypothetical protein SORBIDRAFT_03g016930 [Sorghum bicolor]
Length = 178
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIR-TTGRPQTKKRREADENRA--FKRS 58
E Y+ +PD+S+W H + P++++ T GR Q ++++ E + K+
Sbjct: 6 EKFGAAYEDLISAIPDKSQWLKSDHGFFMKPLLLKPTAGRRQKERKKRCTEGGSSTTKKK 65
Query: 59 SSVRCSNFEEWGHNVRTCK 77
S +C ++ +GH CK
Sbjct: 66 GSHQCPIYKGYGHRWYNCK 84
>gi|222636189|gb|EEE66321.1| hypothetical protein OsJ_22559 [Oryza sativa Japonica Group]
Length = 1360
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSS 59
KK Y PV S WP + + P I+ G + RRE++E + + S
Sbjct: 1096 FKKIYSQCLEPVEGMSSWPEDDKEPLNAPGYIKMPG----ETRRESNEPLKATKLSRIGS 1151
Query: 60 SVRCSNFEEWGHNVRTCKVDKGS 82
+RCS ++ GHN TC G
Sbjct: 1152 IIRCSKCKQIGHNKSTCNKHHGG 1174
>gi|398836871|ref|ZP_10594197.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum sp.
YR522]
gi|398210658|gb|EJM97300.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum sp.
YR522]
Length = 705
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ +E+ ++VR
Sbjct: 378 LHYNM-PPFATGETGRVGTPKRREIGHGRLAKRALLAALPAADEFSYSVR 426
>gi|10177835|dbj|BAB11264.1| unnamed protein product [Arabidopsis thaliana]
Length = 733
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS- 60
E K Y +PV W ++PP GRP+ R + A +S
Sbjct: 593 EKWKLCYNSLLFPVNGMELWETHSDVVVMPPPDRIMPGRPKKNDRIKDPSEEASSENSQK 652
Query: 61 --VRCSNFEEWGHNVRTCKVD 79
V CSN + GHN RTC+++
Sbjct: 653 ALVTCSNCGQTGHNKRTCQIE 673
>gi|222637104|gb|EEE67236.1| hypothetical protein OsJ_24379 [Oryza sativa Japonica Group]
Length = 595
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE 51
+ T+ H PV S WP + + P I+ GRP+TK+RRE E
Sbjct: 424 FRSTHVHCLQPVEGMSAWPEDDREALNAPGYIKMPGRPRTKRRREMHE 471
>gi|218198850|gb|EEC81277.1| hypothetical protein OsI_24382 [Oryza sativa Indica Group]
Length = 1267
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSS 59
KK Y PV S WP + + P I+ G + RRE++E + + S
Sbjct: 1122 FKKIYSQCLEPVEGMSSWPEDDKEPLNAPGYIKMPG----ETRRESNEPLKATKLSRIGS 1177
Query: 60 SVRCSNFEEWGHNVRTCKVDKGS 82
+RCS ++ GHN TC G
Sbjct: 1178 IIRCSKCKQIGHNKSTCNKHHGG 1200
>gi|8920571|gb|AAF81293.1|AC027656_10 Strong similarity to a mutator-like transposase from Arabidopsis
thaliana gb|AC006067. It contains a zinc finger, CCHC
class domain PF|00098 [Arabidopsis thaliana]
Length = 753
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 2 EALKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSS- 60
E K Y +PV W ++PP GRP+ R + A +S
Sbjct: 613 EKWKLCYNSLLFPVNGMELWETHSDVVVMPPPDRIMPGRPKKNDRIKDPSEEASSENSQK 672
Query: 61 --VRCSNFEEWGHNVRTCKVD 79
V CSN + GHN RTC+++
Sbjct: 673 ALVTCSNCGQTGHNKRTCQIE 693
>gi|118594124|ref|ZP_01551471.1| polynucleotide phosphorylase/polyadenylase [Methylophilales
bacterium HTCC2181]
gi|118439902|gb|EAV46529.1| polynucleotide phosphorylase/polyadenylase [Methylophilales
bacterium HTCC2181]
Length = 716
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYN PP TGR T KRRE + KR S + E++ + +R
Sbjct: 387 LHYN-FPPYATGETGRVGTPKRREIGHGKLAKRGLSAALPSKEDFDYTIR 435
>gi|38346143|emb|CAD40681.2| OSJNBb0118P14.3 [Oryza sativa Japonica Group]
Length = 939
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSSS 60
++ Y + P+ D W + PP+ + GRP+ +R++ E + K
Sbjct: 744 EQAYSYNIMPLRDSIHWEKMQGIEVKPPVYEKKVGRPKKTRRKQPQELEGGTKISKHGVE 803
Query: 61 VRCSNFEEWGHNVRTCKVDKGSKK 84
+ CS + GHN +CK K K
Sbjct: 804 MHCSYCKNGGHNKTSCKKRKADLK 827
>gi|297606463|ref|NP_001058508.2| Os06g0704400 [Oryza sativa Japonica Group]
gi|255677375|dbj|BAF20422.2| Os06g0704400 [Oryza sativa Japonica Group]
Length = 804
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 4 LKKTYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE----NRAFKRSS 59
KK Y PV S WP + + P I+ G + RRE++E + + S
Sbjct: 614 FKKIYSQCLEPVEGMSSWPEDDKEPLNAPGYIKMPG----ETRRESNEPLKATKLSRIGS 669
Query: 60 SVRCSNFEEWGHNVRTC 76
+RCS ++ GHN TC
Sbjct: 670 IIRCSKCKQIGHNKSTC 686
>gi|9989046|gb|AAG10809.1|AC018460_3 Similar to mutator transposase [Arabidopsis thaliana]
Length = 884
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 7 TYKHQYYPVPD--ESRWPPEL-HYNMLPPIIIRTTGRPQTKKRREADENRAFK--RSSSV 61
+YK +P + E P EL H +MLPP R +GRP+ + E + K R+
Sbjct: 806 SYKGAVFPEANGKEEDIPEELPHRSMLPPYTRRPSGRPKVARIPSTGEYKKPKTGRTQQN 865
Query: 62 RCSNFEEWGHNVRTC 76
RCS + GHN +C
Sbjct: 866 RCSRCKGLGHNRTSC 880
>gi|326511513|dbj|BAJ91901.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528689|dbj|BAJ97366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 740
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 5 KKTYKHQYYPVPDESRWPPELHYNMLP----PIIIRTTGRPQTKKRREADENRAFKRSSS 60
+ TY P+PD P N P IRT R K + AD KR+
Sbjct: 642 RSTYSMSINPIPDVILGPTTSTDNCQSLATFPFPIRTRRRVGRPKEKPADPRITIKRA-- 699
Query: 61 VRCSNFEEWGHNVRTCKV 78
VRCS + +GHN TCK+
Sbjct: 700 VRCSRCKGYGHNKATCKI 717
>gi|253997787|ref|YP_003049850.1| polynucleotide phosphorylase/polyadenylase [Methylovorus
glucosetrophus SIP3-4]
gi|313199851|ref|YP_004038509.1| polyribonucleotide nucleotidyltransferase [Methylovorus sp. MP688]
gi|253984466|gb|ACT49323.1| Polyribonucleotide nucleotidyltransferase [Methylovorus
glucosetrophus SIP3-4]
gi|312439167|gb|ADQ83273.1| Polyribonucleotide nucleotidyltransferase [Methylovorus sp. MP688]
Length = 707
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 25 LHYNMLPPIIIRTTGRPQTKKRREADENRAFKRSSSVRCSNFEEWGHNVR 74
LHYNM PP TGR T KRRE R KR+ + EE+G+ +R
Sbjct: 378 LHYNM-PPYATGETGRVGTPKRREIGHGRLAKRALLAALPSQEEFGYTIR 426
>gi|222624845|gb|EEE58977.1| hypothetical protein OsJ_10678 [Oryza sativa Japonica Group]
Length = 785
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 7 TYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE 51
TY+H PV + +WP PP ++ GRP+T++ RE E
Sbjct: 697 TYQHCLQPVEGQDKWPVSDMTKPHPPAYVKMPGRPKTQRTREPTE 741
>gi|108707912|gb|ABF95707.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 829
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 7 TYKHQYYPVPDESRWPPELHYNMLPPIIIRTTGRPQTKKRREADE 51
TY+H PV + +WP PP ++ GRP+T++ RE E
Sbjct: 741 TYQHCLQPVEGQDKWPVSDMTKPHPPAYVKMPGRPKTQRTREPTE 785
>gi|451844693|gb|EMD58091.1| hypothetical protein COCSADRAFT_104790 [Cochliobolus sativus
ND90Pr]
Length = 98
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 43 TKKRREADENRAFKRSSSVRCSNFEEWGHNVRTCKVD 79
T + R+ E R + RCS E GHN RTCK D
Sbjct: 57 THEERQGGERSGVSRQALARCSRCRETGHNSRTCKKD 93
>gi|451845045|gb|EMD58359.1| hypothetical protein COCSADRAFT_350677, partial [Cochliobolus
sativus ND90Pr]
Length = 82
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 47 READENRAFKRSSSVRCSNFEEWGHNVRTCKVD 79
R+ E R + RCS E GHN RTCK D
Sbjct: 45 RQGGERSGASRQALARCSRCRETGHNARTCKKD 77
>gi|242048660|ref|XP_002462076.1| hypothetical protein SORBIDRAFT_02g017240 [Sorghum bicolor]
gi|241925453|gb|EER98597.1| hypothetical protein SORBIDRAFT_02g017240 [Sorghum bicolor]
Length = 190
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 15 VPDESRWPP-ELHYNMLPPIIIRTTGRPQTKKRR-----EADENRAFKRSSSVRCSNFEE 68
+P + W +L + +LPPI R GRP +KRR E N KR RC
Sbjct: 1 MPGKEEWEKVDLGFKLLPPICKRAAGRP--RKRRFIGVEEGGSNTKGKR----RCKRCGG 54
Query: 69 WGHNVRTC 76
+GH +TC
Sbjct: 55 FGHLQKTC 62
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,408,445,185
Number of Sequences: 23463169
Number of extensions: 47645989
Number of successful extensions: 80476
Number of sequences better than 100.0: 417
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 313
Number of HSP's that attempted gapping in prelim test: 80186
Number of HSP's gapped (non-prelim): 424
length of query: 84
length of database: 8,064,228,071
effective HSP length: 54
effective length of query: 30
effective length of database: 6,797,216,945
effective search space: 203916508350
effective search space used: 203916508350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)